donor_unique_id Chr Start End Intrchr. SVs Total SVs (intrachr. + transl.) SVs in sample Nb. DEL Nb. DUP Nb. h2hINV Nb. t2tINV Nb. TRA P fragment joints P chr breakpoint enrichment Nb. CN segments P exponential dist P exponential dist. cluster CN segments Nb. oscillating CN Nb. oscillaring CN 3 states CN segments chr. Nb. oscillating chr. Nb. oscillating chr 3 states PGA sample PGA chr. PGNA chr. clustered APOBEC mutations (<2.5 Kb) CN mode 1 CN mode 2 wgs_exclusion_white_gray dcc_project_code Other interacting chromothripsis regions FDR fragment joints intrachr. SVs and TRA FDR chr breakpoint enrichment FDR exponential dist. FDR exponential dist. cluster FDR fragment joints intrachr. SVs chromo chromo_label tissue.x donor_idx tissue2 purity ploidy histo type_chromothripsis Nb. breakpoints in chromosome Fraction SVs in chromothripsis TP53_mutations MDM2_CN project_code icgc_donor_id submitted_donor_id tcga_donor_uuid donor_sex donor_vital_status donor_diagnosis_icd10 first_therapy_type first_therapy_response donor_age_at_diagnosis donor_survival_time donor_interval_of_last_followup tobacco_smoking_history_indicator tobacco_smoking_intensity alcohol_history alcohol_history_intensity donor_wgs_included_excluded histology_abbreviation tissue.y code event response comment BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 1 33384961 151855802 2 3 136 0 0 0 2 1 0.11 0.75 4 0 0 4 3 4 14 5 8 26.55 42.18 57.82 11 2 1 Whitelist BLCA-US 0.62 0.92 0 0 0.48 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 5 0.02 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 2 123278460 153873571 4 4 136 2 0 1 1 0 0.57 0.76 7 0 0 7 5 7 9 5 5 26.55 4.92 94.97 17 2 3 Whitelist BLCA-US 0.68 0.92 0 0 0.64 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 8 0.03 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 3 31044413 84685234 12 12 136 2 2 4 4 0 0.72 0.04 12 0 0 12 12 12 13 13 13 26.55 27.01 72.81 13 1 2 Whitelist BLCA-US 0.83 0.14 0 0 0.8 1 High confidence BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC Canonical without polyploidization 24 0.09 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 4 176301814 177594189 2 2 136 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 6 5 5 26.55 5.87 94.03 6 2 1 Whitelist BLCA-US 0.68 1 0 0 0.64 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 4 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 5 67743249 176695147 14 14 136 2 4 5 3 0 0.7 0 20 0 0 20 14 20 26 18 24 26.55 38.4 58.93 17 2 1 Whitelist BLCA-US 0.81 0 0 0 0.78 1 High confidence BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC Canonical without polyploidization 28 0.1 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 6 84881107 166575966 6 6 136 2 0 3 1 0 0.34 0.1 7 0 0 7 7 7 9 9 9 26.55 18.72 81.15 15 2 1 Whitelist BLCA-US 0.62 0.27 0 0 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 12 0.04 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 7 20274268 50455591 1 2 136 2 0 0 0 0 0.11 0.13 2 0.02 0 NA NA NA NA NA NA 26.55 0.03 99.71 6 1 2 Whitelist BLCA-US 0.54 0.31 0.02 0 0.48 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 4 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 8 26699092 143654659 19 19 136 3 4 6 6 0 0.7 0 1 0 0 NA NA NA 4 4 4 26.55 0.41 99.58 13 2 NA Whitelist BLCA-US 0.81 0 0 0 0.78 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 38 0.14 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 9 21746903 101943231 1 3 136 2 0 0 0 1 0.11 0.5 6 NA 0 6 3 6 7 3 3 26.55 99.43 0.43 3 1 0 Whitelist BLCA-US 0.62 0.75 NA 0 0.48 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 5 0.02 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 10 108244751 109463787 1 1 136 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 26.55 0.9 98.93 1 1 2 Whitelist BLCA-US 0.62 0.26 NA NA 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 11 108048363 124188831 1 1 136 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 4 4 4 26.55 49.42 46.38 0 1 2 Whitelist BLCA-US 0.62 0.45 NA NA 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 12 12774197 14667420 2 2 136 0 0 1 1 0 0.57 0.1 2 NA 0 NA NA NA NA NA NA 26.55 1.41 98.5 1 1 2 Whitelist BLCA-US 0.68 0.26 NA 0 0.64 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 4 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 13 42975600 107442606 1 8 136 6 0 0 0 2 0 0.05 10 0 0 10 10 10 11 11 11 26.55 8.13 91.87 26 1 2 Whitelist BLCA-US 0.06 0.17 0 0 0.03 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 14 0.05 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 14 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 0 0 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 15 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 0 0 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 16 52399469 79165449 1 1 136 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 26.55 0 99.91 1 2 NA Whitelist BLCA-US 0.62 0.52 NA NA 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 17 41971447 58082157 1 2 136 1 0 0 1 0 0.57 1 2 NA 0 NA NA NA 6 3 3 26.55 30.32 65.25 4 1 2 Whitelist BLCA-US 0.68 1 NA 0 0.64 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 4 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 18 36107519 70546588 1 3 136 2 1 0 0 0 0.3 1 3 0 0 NA NA NA 5 5 5 26.55 28.23 71.76 5 2 1 Whitelist BLCA-US 0.62 1 0 0 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 6 0.02 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 19 NA NA 0 0 136 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.76 NA NA NA 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 0 0 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 20 14727992 15119744 1 1 136 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 26.55 0 98.93 0 2 NA Whitelist BLCA-US 0.62 0.63 NA NA 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 21 25802801 26000737 1 1 136 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.55 0 77.35 0 2 NA Whitelist BLCA-US 0.62 1 NA NA 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 22 19879249 36142675 1 3 136 1 0 0 2 0 0.3 0.08 6 0 0 6 6 6 6 6 6 26.55 42.52 57.48 0 1 2 Whitelist BLCA-US 0.62 0.23 0 0 0.59 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 6 0.02 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::096b4f32-10c1-4737-a0dd-cae04c54ee33 X NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 096b4f32-10c1-4737-a0dd-cae04c54ee33 BLCA 0.74 1.77 Bladder-TCC NA 0 0 NA 2 BLCA-US DO804 TCGA-BT-A20T 096b4f32-10c1-4737-a0dd-cae04c54ee33 male deceased C67.3 63 453 NA NA Included Bladder-TCC BLCA US 1 14.9 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 1 151302531 192754887 1 4 59 1 1 0 0 2 0.57 1 4 0 0 4 3 4 7 3 5 77.07 100 0 0 3 5 Whitelist BLCA-US 11 1 1 0 0 0.64 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 6 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 2 201691248 202499615 1 1 59 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA 5 3 4 77.07 83.05 16.82 0 2 4 Whitelist BLCA-US 0.62 0.47 NA NA 0.59 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 3 61032869 115668612 1 2 59 0 2 0 0 0 0.11 0.44 4 NA 0 4 3 4 5 3 5 77.07 99.86 0 0 3 4 Whitelist BLCA-US 0.54 0.69 NA 0 0.48 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 4 91091306 143356534 1 2 59 2 0 0 0 0 0.11 0.8 4 0 0 4 4 4 5 5 5 77.07 99.91 0.07 0 2 3 Whitelist BLCA-US 0.54 0.95 0 0 0.48 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 5 148928066 148962117 1 1 59 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 77.07 99.87 0 0 3 NA Whitelist BLCA-US 0.62 0.81 NA NA 0.59 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 6 4320085 41948860 1 3 59 1 1 0 0 1 0.57 1 7 NA 0 7 4 5 9 4 4 77.07 11.46 88.37 0 2 4 Whitelist BLCA-US 0.87 1 NA 0 0.64 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 5 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 7 NA NA 0 0 59 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.63 NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 8 37212072 42747108 1 3 59 0 1 0 1 1 0.57 0.23 3 0 0 NA NA NA 9 9 9 77.07 13.72 82.85 0 2 1 Whitelist BLCA-US 0.87 0.46 0 0 0.64 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 5 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 9 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 10 122817529 123539883 1 1 59 0 1 0 0 0 0.39 0.05 2 0 NA NA NA NA 8 3 4 77.07 42.7 53.89 0 3 5 Whitelist BLCA-US 0.62 0.17 0 NA 0.59 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 11 49140712 50656929 3 3 59 2 1 0 0 0 0.3 0 10 0 0 10 5 5 27 11 11 77.07 64.74 34.84 0 6 1 Whitelist BLCA-US 0.62 0 0 0 0.59 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 6 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 12 30320743 33670521 2 2 59 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 6 4 6 77.07 83.5 16.42 0 3 2 Whitelist BLCA-US 0.68 0.08 0 0 0.64 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 15 86117904 86139190 1 1 59 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.07 99.9 0 0 3 NA Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 16 13494762 79289629 1 2 59 1 1 0 0 0 0.57 0.67 4 NA 0 4 3 4 5 3 3 77.07 99.99 0 0 4 3 Whitelist BLCA-US 0.68 0.87 NA 0 0.64 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 17 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 18 NA NA 0 0 59 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BLCA-US NA 0.44 NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 19 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::178b28cd-99c3-48dc-8d09-1ef71b4cee80 X 7451452 7580458 2 2 59 2 0 0 0 0 0.11 0 4 0 0 4 3 4 16 4 8 77.07 99.58 0.19 0 2 4 Whitelist BLCA-US 0.54 0 0 0 0.48 0 No BLCA-US 178b28cd-99c3-48dc-8d09-1ef71b4cee80 BLCA 0.74 3.17 Bladder-TCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 BLCA-US DO555 TCGA-DK-A3IL 178b28cd-99c3-48dc-8d09-1ef71b4cee80 female alive C67.2 79 NA 121 NA Included Bladder-TCC BLCA US 0 3.98 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 1 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 2 213680483 214353263 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 74.78 0.28 99.63 0 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 2 0.06 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 3 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 4 1741369 19281894 1 2 18 1 1 0 0 0 0.57 0.34 3 NA 0.04 NA NA NA NA NA NA 74.78 98.97 0.81 0 3 2 Whitelist BLCA-US 0.68 0.59 NA 0.04 0.64 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 4 0.11 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 5 1295168 18433737 6 6 18 2 2 1 1 0 0.88 0 1 0 0 NA NA NA NA NA NA 74.78 99.85 0 0 4 NA Whitelist BLCA-US 0.93 0 0 0 0.91 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 12 0.33 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 7 10227587 158886431 1 1 18 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 74.78 99.82 0 1 3 4 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 2 0.06 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 8 NA NA 0 0 18 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.82 NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 10 NA NA 0 0 18 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.8 NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 15 58594270 58604912 1 1 18 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 74.78 99.87 0 0 3 NA Whitelist BLCA-US 0.62 0.64 NA NA 0.59 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 2 0.06 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 16 79053417 79112248 1 1 18 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 74.78 99.82 0.07 0 2 3 Whitelist BLCA-US 0.62 0.63 NA NA 0.59 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 2 0.06 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 22 40454454 48873957 1 1 18 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 4 4 74.78 100 0 0 3 4 Whitelist BLCA-US 0.62 0.41 NA NA 0.59 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 2 0.06 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::1e308b12-0590-4dae-94d0-a539fcf25df7 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 1e308b12-0590-4dae-94d0-a539fcf25df7 BLCA 0.8 3.13 Bladder-TCC NA 0 0 NA 5 BLCA-US DO479 TCGA-CF-A3MF 1e308b12-0590-4dae-94d0-a539fcf25df7 male alive C67.9 34 NA 0 NA Included Bladder-TCC BLCA US 0 0 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 1 8750767 248002325 1 10 271 1 6 0 1 2 0.01 0.07 15 0 0 15 8 8 18 8 9 57.52 99.63 0 1 4 5 Whitelist BLCA-US 0.47 0.21 0 0 0.21 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 18 0.03 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 2 9769115 9811205 2 2 271 0 0 1 1 0 0.57 0.44 4 0 0 4 4 4 35 13 13 57.52 54.94 42.38 0 5 6 Whitelist BLCA-US 0.68 0.69 0 0 0.64 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 4 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 3 32346989 182866636 1 8 271 2 4 1 0 1 0.17 0.03 18 0 0 18 7 11 19 7 7 57.52 52.6 44.26 0 6 5 Whitelist BLCA-US 0.54 0.12 0 0 0.59 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 15 0.03 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 4 85889344 189741846 1 3 271 0 3 0 0 0 0.03 0 6 0 0 6 6 6 9 9 9 57.52 2.96 94.58 1 2 3 Whitelist BLCA-US 0.41 0 0 0 0.33 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 6 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 5 5481718 45983726 8 10 271 1 1 3 3 2 0.57 0 42 0 0 42 6 9 54 7 7 57.52 25.61 71.73 3 8 9 Whitelist BLCA-US 0.68 0 0 0 0.64 0 Low confidence BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC With other complex events 18 0.03 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 6 143422040 143486620 2 2 271 0 0 1 1 0 0.57 0.03 3 0 0 NA NA NA 13 8 8 57.52 28.11 69.04 0 2 3 Whitelist BLCA-US 0.68 0.11 0 0 0.64 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 4 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 7 2312288 127735339 1 7 271 1 3 0 0 3 0.11 0.08 11 0 0 11 4 5 12 4 5 57.52 89.86 9.91 1 2 3 Whitelist BLCA-US 0.62 0.23 0 0 0.48 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 11 0.02 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 8 88431265 90564844 2 2 271 0 2 0 0 0 0.11 0.02 4 0 0 4 4 4 32 5 5 57.52 72.44 24.14 1 4 5 Whitelist BLCA-US 0.54 0.07 0 0 0.48 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 4 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 9 5086998 21286063 6 11 271 1 2 2 1 5 0.88 0.11 26 0 0 26 6 6 32 6 6 57.52 63.3 33.62 0 2 8 Whitelist BLCA-US 0.74 0.29 0 0 0.91 0 Low confidence BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC With other complex events 17 0.03 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 10 29644179 104644201 1 6 271 0 3 1 0 2 0.11 0.38 17 0 0 17 4 5 20 5 5 57.52 60.2 36.38 1 4 5 Whitelist BLCA-US 0.54 0.63 0 0 0.48 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 10 0.02 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 11 55978335 57595966 2 2 271 1 1 0 0 0 0.57 0.19 6 0 0 6 0 3 23 5 6 57.52 22.9 73.12 1 7 3 Whitelist BLCA-US 0.68 0.41 0 0 0.64 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 4 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 12 8665445 118666854 1 7 271 1 4 1 0 1 0.11 0.67 11 0 0 11 3 6 19 3 3 57.52 99.92 0 6 4 5 Whitelist BLCA-US 0.62 0.87 0 0 0.48 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 13 0.02 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 13 28134112 50771388 1 2 271 0 2 0 0 0 0.11 0.09 3 0 0 NA NA NA 4 4 4 57.52 24.35 75.65 0 2 3 Whitelist BLCA-US 0.54 0.25 0 0 0.48 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 4 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 14 60403716 103656371 1 3 271 0 3 0 0 0 0.03 0.05 5 0 0 5 5 5 6 5 6 57.52 0.14 96.15 0 2 3 Whitelist BLCA-US 0.41 0.17 0 0 0.33 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 6 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 15 23020110 88079972 9 15 271 1 3 3 2 6 0.75 0 31 0 0 31 3 6 38 3 6 57.52 95.22 0 1 8 4 Whitelist BLCA-US 0.62 0 0 0 0.83 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 24 0.04 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 16 67017503 82189566 5 5 271 0 0 2 3 0 0.14 0.04 14 0 0 14 8 10 22 8 10 57.52 95.07 0 0 5 4 Whitelist BLCA-US 0.62 0.13 0 0 0.59 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 10 0.02 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 17 1995290 68622179 1 5 271 2 3 0 0 0 0.14 0.57 8 0 0 8 3 8 10 4 4 57.52 99.37 0.62 0 3 2 Whitelist BLCA-US 0.62 0.79 0 0 0.59 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 10 0.02 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 18 20342424 37227667 2 4 271 2 2 0 0 0 0.26 0.71 9 0 0 9 7 9 16 7 7 57.52 95.35 0 0 4 5 Whitelist BLCA-US 0.62 0.9 0 0 0.59 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 8 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 19 NA NA 0 0 271 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BLCA-US NA 0.97 0 NA NA 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 0 0 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 20 14216488 54856845 4 10 271 2 0 1 1 6 0.57 0 32 0 0 32 3 5 38 3 5 57.52 92.98 0 1 8 3 Whitelist BLCA-US 9 0.68 0 0 0 0.64 0 Linked to low confidence BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC With other complex events 14 0.03 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 21 31582213 31686688 1 1 271 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 57.52 0.22 70.07 0 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 2 0 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad 22 36244665 41958231 1 4 271 2 0 1 1 0 0.57 0 6 0 0 6 3 6 8 3 3 57.52 90.47 9.53 0 2 3 Whitelist BLCA-US 0.68 0.01 0 0 0.64 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 8 0.01 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::24f21425-b001-4986-aedf-5b4dd851c6ad X 6615453 133296546 1 13 271 8 3 0 0 2 0 0.09 30 0 0 30 7 9 31 7 8 57.52 84.47 15.3 4 2 4 Whitelist BLCA-US 0.1 0.26 0 0 0.07 0 No BLCA-US 24f21425-b001-4986-aedf-5b4dd851c6ad BLCA 0.64 3.43 Bladder-TCC NA 24 0.04 NA 4 BLCA-US DO689 TCGA-BT-A20V 24f21425-b001-4986-aedf-5b4dd851c6ad female deceased C67.2 59 154 NA NA Included Bladder-TCC BLCA US 1 5.07 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 1 19030071 246820847 1 27 449 4 2 2 3 16 0.8 0.6 45 0 0 45 4 8 47 4 4 70.55 99.1 0.9 4 3 4 Whitelist BLCA-US 16_2 0.67 0.81 0 0 0.84 1 Linked to high confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 38 0.04 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 2 14647349 206284285 1 14 449 6 3 0 1 4 0.04 0 23 0 0 23 6 8 25 6 8 70.55 67.45 29.6 0 3 4 Whitelist BLCA-US 5_8 0.41 0 0 0 0.39 1 Linked to low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 24 0.03 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 3 10412503 11364506 2 3 449 0 0 1 1 1 0.57 0 3 0 0 NA NA NA 16 4 4 70.55 96.85 0 0 8 10 Whitelist BLCA-US 0.87 0 0 0 0.64 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 5 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 4 91567129 165122034 3 3 449 2 1 0 0 0 0.3 0.34 10 0 0 10 5 10 31 5 6 70.55 14.73 82.83 0 2 1 Whitelist BLCA-US 0.62 0.59 0 0 0.59 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 6 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 5 16225772 123920469 1 13 449 4 1 2 1 5 0.39 0.08 22 0 0 22 8 9 23 8 8 70.55 67.87 29.45 8 2 1 Whitelist BLCA-US 2 0.8 0.23 0 0 0.59 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 21 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 6 88317416 123219500 5 6 449 3 1 1 0 1 0.28 0.32 19 0 0 19 3 3 42 5 5 70.55 58.92 40.94 0 2 11 Whitelist BLCA-US 0.54 0.57 0 0 0.59 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 11 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 7 12512048 21119497 6 14 449 2 3 1 0 8 0.34 0.07 22 0 0 22 4 7 39 8 9 70.55 98.73 1.05 0 5 4 Whitelist BLCA-US 0.54 0.22 0 0 0.59 1 Low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 20 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 8 60780756 109595289 23 26 449 9 2 7 5 3 0.2 0 40 0 0 40 6 6 51 8 8 70.55 96.58 0 7 4 5 Whitelist BLCA-US 2 0.54 0 0 0 0.59 1 Low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 49 0.05 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 9 25487665 86460519 1 13 449 2 1 1 0 9 0.57 0.54 14 0 0 14 5 6 21 5 6 70.55 96.76 0.13 0 6 7 Whitelist BLCA-US 0.62 0.77 0 0 0.64 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 17 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 10 42525573 129255365 13 29 449 3 7 1 2 16 0.09 0 39 0 0 39 3 6 52 6 8 70.55 42.62 53.92 4 2 6 Whitelist BLCA-US 0.62 0 0 0 0.48 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 42 0.05 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 11 8965507 99216923 1 14 449 2 2 0 2 8 0.57 0.82 21 0 0 21 13 13 24 14 14 70.55 62.1 34.07 0 3 2 Whitelist BLCA-US 16_17_X 0.9 0.96 0 0 0.64 1 Linked to high confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC Canonical without polyploidization 20 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 12 13507658 119049122 32 38 449 11 10 5 6 6 0.35 0 79 0 0 79 6 9 81 6 6 70.55 54.81 41.45 13 4 2 Whitelist BLCA-US 0.62 0 0 0 0.59 1 Low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 70 0.08 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 13 24129863 27326639 5 5 449 1 2 1 1 0 0.9 0.8 4 0 0 4 4 4 15 5 5 70.55 45.59 54.41 0 2 3 Whitelist BLCA-US 0.93 0.95 0 0 0.92 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 10 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 14 67123186 69054065 1 2 449 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA 6 3 3 70.55 99.09 0 0 3 1 Whitelist BLCA-US 0.54 0 NA 0 0.48 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 4 0 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 15 89645270 89859590 1 1 449 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 7 4 5 70.55 52.55 42.58 0 3 4 Whitelist BLCA-US 0.62 0.01 NA NA 0.59 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 2 0 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 16 6669849 31591597 5 13 449 1 1 1 2 8 0.9 0.1 22 0 0 22 8 22 30 8 8 70.55 92.89 7.01 0 4 3 Whitelist BLCA-US 11_X 0.8 0.27 0 0 0.92 1 High confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 18 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 17 28237017 34001517 9 28 449 0 2 5 2 19 0.13 0 31 0 0 31 5 5 56 5 5 70.55 85.43 10.02 0 9 13 Whitelist BLCA-US 11_X 0.68 0 0 0 0.55 1 Low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 37 0.04 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 18 23239188 23514865 1 1 449 1 0 0 0 0 0.39 0.08 2 0 NA NA NA NA 10 4 8 70.55 14.89 80.46 0 3 4 Whitelist BLCA-US 0.62 0.23 0 NA 0.59 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 2 0 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 19 28975506 40408070 3 11 449 0 1 1 1 8 0.8 0.01 14 0 0 14 3 4 16 3 3 70.55 91.84 0 0 16 20 Whitelist BLCA-US 0.74 0.03 0 0 0.84 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 14 0.02 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 20 14219374 29938696 1 6 449 1 5 0 0 0 0.01 0.74 9 0 0 9 5 6 12 5 6 70.55 92.06 0.91 0 3 4 Whitelist BLCA-US 0.25 0.91 0 0 0.19 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 12 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 21 37282749 37407251 2 3 449 1 0 0 1 1 0.57 0.08 4 0 0 4 3 4 11 3 6 70.55 77.12 0 0 8 3 Whitelist BLCA-US 0.87 0.23 0 0 0.64 1 No BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC NA 5 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 22 19474849 40455649 10 18 449 4 3 2 1 8 0.57 0 32 0 0 32 4 6 34 4 6 70.55 72.58 27.42 0 6 4 Whitelist BLCA-US 12_17 0.64 0 0 0 0.64 1 Low confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC With other complex events 28 0.03 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::3ed614e7-f356-4d87-985b-d3bbbae3bb40 X 3858348 76848685 4 8 449 2 1 1 0 4 0.57 0.11 7 0 0 7 7 7 17 9 11 70.55 92.85 6.92 1 1 2 Whitelist BLCA-US 16 1 0.28 0 0 0.64 1 High confidence BLCA-US 3ed614e7-f356-4d87-985b-d3bbbae3bb40 BLCA 0.74 3.29 Bladder-TCC Canonical without polyploidization 12 0.01 NA 0 BLCA-US DO483 TCGA-DK-A1A7 3ed614e7-f356-4d87-985b-d3bbbae3bb40 female alive C67.9 67 NA 273 NA Included Bladder-TCC BLCA US 0 8.98 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 1 63787493 106220096 1 2 62 2 0 0 0 0 0.11 1 4 0 0 4 4 4 7 7 7 19.79 0.82 99.18 7 1 2 Whitelist BLCA-US 0.54 1 0 0 0.48 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 4 0.03 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 2 84134803 213944920 1 3 62 3 0 0 0 0 0.03 0.82 4 0 0 4 4 4 6 6 6 19.79 9.87 90.04 3 1 2 Whitelist BLCA-US 0.41 0.96 0 0 0.33 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 6 0.05 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 3 102568566 102868686 1 1 62 0 0 1 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 19.79 0.15 99.8 2 1 2 Whitelist BLCA-US 0.62 0.58 NA NA 0.59 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 4 20371406 21723202 1 1 62 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 19.79 0.71 99.28 0 1 2 Whitelist BLCA-US 0.62 0.69 NA NA 0.59 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 5 22798741 85065167 1 3 62 3 0 0 0 0 0.03 1 8 0 0 8 8 8 9 9 9 19.79 0.93 96.13 1 1 2 Whitelist BLCA-US 0.41 1 0 0 0.33 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 6 0.05 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 6 143558578 155627098 1 2 62 2 0 0 0 0 0.11 0.59 4 NA 0 4 4 4 5 5 5 19.79 1.34 98.52 0 1 2 Whitelist BLCA-US 0.54 0.81 NA 0 0.48 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 4 0.03 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 7 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 8 NA NA 0 0 62 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.93 NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 9 21790604 125622768 1 2 62 2 0 0 0 0 0.11 0.74 6 0 0 6 3 6 7 3 3 19.79 98.73 1.12 5 1 0 Whitelist BLCA-US 0.54 0.91 0 0 0.48 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 4 0.03 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 10 72116753 100934605 4 4 62 0 2 1 1 0 0.57 0 7 0 0 7 7 7 13 9 9 19.79 11.11 88.72 1 2 1 Whitelist BLCA-US 0.68 0 0 0 0.64 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 8 0.06 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 11 114776082 114792851 1 1 62 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 7 7 7 19.79 0.36 99.21 0 1 2 Whitelist BLCA-US 0.62 0.62 NA NA 0.59 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 12 130143980 132200714 1 2 62 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 19.79 0.31 99.61 5 1 2 Whitelist BLCA-US 0.54 1 NA 0 0.48 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 4 0.03 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 13 20578507 113387449 1 8 62 6 0 0 0 2 0 0 12 0 0 12 12 12 13 13 13 19.79 95.11 4.89 1 2 3 Whitelist BLCA-US 0.06 0 0 0 0.03 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 14 0.11 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 14 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 15 NA NA 0 0 62 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BLCA-US NA 0.49 NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 16 5394195 7308906 1 1 62 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.79 2.12 97.79 0 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 17 19173324 21308123 2 9 62 1 1 1 1 5 1 0 11 0 0 11 3 5 15 3 5 19.79 95.57 0 0 7 17 Whitelist BLCA-US 10 0.97 0 0 0 1 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 13 0.1 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 18 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 19 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 20 59840428 61357124 1 1 62 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA 6 3 3 19.79 49.36 43 0 2 3 Whitelist BLCA-US 0.62 0.35 NA NA 0.59 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 0 0 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::419deaac-ea45-4bdd-9fa0-b5cd8429b44f X 8599191 46043102 2 2 62 0 0 1 1 0 0.57 0.13 4 0 0 4 4 4 5 5 5 19.79 100 0 0 0 1 Whitelist BLCA-US 0.68 0.32 0 0 0.64 0 No BLCA-US 419deaac-ea45-4bdd-9fa0-b5cd8429b44f BLCA 0.66 1.96 Bladder-TCC NA 4 0.03 NA 2 BLCA-US DO695 TCGA-BT-A20Q 419deaac-ea45-4bdd-9fa0-b5cd8429b44f male deceased C67.0 73 593 NA NA Included Bladder-TCC BLCA US 1 19.51 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 1 1945816 84318375 1 10 117 5 0 0 0 5 0 0.49 13 0 0 13 9 13 15 10 10 14.29 8.08 91.92 6 1 2 Whitelist BLCA-US 10 0.24 0.74 0 0 0.07 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 15 0.06 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 2 7119712 219421359 3 6 117 2 2 1 1 0 0.88 0.09 20 0 0 20 9 20 21 9 9 14.29 1.69 98.2 15 2 1 Whitelist BLCA-US 0.93 0.26 0 0 0.91 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 12 0.05 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 3 14406357 159092671 1 4 117 4 0 0 0 0 0.01 0.86 7 0 0 7 4 4 8 4 5 14.29 28.92 70.96 33 2 3 Whitelist BLCA-US 0.21 0.99 0 0 0.16 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 8 0.03 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 4 144150885 190874076 24 27 117 6 3 7 8 3 0.51 0 29 0 0 29 9 16 37 9 11 14.29 18.28 81.62 9 2 1 Whitelist BLCA-US 0.62 0 0 0 0.64 1 High confidence BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC With other complex events 51 0.22 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 5 7171356 108153087 1 3 117 1 2 0 0 0 0.3 0.12 3 0.44 0 NA NA NA NA NA NA 14.29 0.66 99.2 13 2 1 Whitelist BLCA-US 0.62 0.31 0.44 0 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 6 0.03 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 6 107696780 109125182 3 5 117 2 0 0 1 2 0.3 1 4 0 0 4 3 4 5 3 3 14.29 0.83 98.93 8 1 0 Whitelist BLCA-US 12 0.62 1 0 0 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 8 0.03 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 7 111861063 111938152 1 1 117 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 14.29 0 99.79 0 2 NA Whitelist BLCA-US 0.62 0.09 NA NA 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 8 104322780 110757936 8 9 117 2 2 3 1 1 0.8 0 5 0 0 5 3 5 16 5 5 14.29 37.9 61.95 5 3 2 Whitelist BLCA-US 0.97 0 0 0 0.84 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 17 0.07 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 9 20864826 22661534 2 2 117 2 0 0 0 0 0.11 0.33 4 NA 0 4 3 4 5 3 3 14.29 1.27 98.05 1 1 0 Whitelist BLCA-US 0.54 0.59 NA 0 0.48 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 10 100148560 117243097 1 5 117 3 0 0 0 2 0.03 1 7 0 0 7 7 7 7 7 7 14.29 0.74 99.15 3 2 1 Whitelist BLCA-US 1 0.45 1 0 0 0.33 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 8 0.03 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 11 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 12 87058877 132081939 1 6 117 3 0 0 1 2 0.11 0.82 8 0 0 8 8 8 10 9 9 14.29 1.35 98.57 2 1 2 Whitelist BLCA-US 0.54 0.96 0 0 0.48 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 10 0.04 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 13 46484158 60247387 1 1 117 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 14.29 11.95 87.9 0 1 2 Whitelist BLCA-US 0.62 0.42 NA NA 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 14 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 15 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 16 79036325 79055382 1 1 117 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 14.29 0 99.66 0 2 NA Whitelist BLCA-US 0.62 0.63 NA NA 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 17 80564263 80782233 1 1 117 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 14.29 44.22 55.26 2 2 NA Whitelist BLCA-US 0.62 1 0 NA 0.59 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 18 NA NA 0 0 117 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.78 NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 19 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 20 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 21 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 22 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 0 0 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::493a4ff2-37a5-4b79-928d-83dbfe534556 X 9042074 127663861 1 2 117 2 0 0 0 0 0.11 0.13 4 NA 0.04 4 4 4 5 5 5 14.29 99.77 0 2 0 1 Whitelist BLCA-US 0.54 0.33 NA 0.04 0.48 1 No BLCA-US 493a4ff2-37a5-4b79-928d-83dbfe534556 BLCA 0.85 2 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO498 TCGA-DK-A1AE 493a4ff2-37a5-4b79-928d-83dbfe534556 male alive C67.9 84 NA 218 NA Included Bladder-TCC BLCA US 0 7.17 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 1 20294004 116867049 4 8 207 1 0 1 2 4 0.57 0 8 0 0 8 5 8 40 6 6 81.53 96.73 0.26 3 3 4 Whitelist BLCA-US 7 0.62 0.02 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 2 26823818 184311172 2 2 207 1 1 0 0 0 0.57 0.13 10 0 0 10 4 10 15 5 5 81.53 83.65 16.25 8 3 4 Whitelist BLCA-US 0.68 0.32 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 3 60459944 60824918 3 3 207 3 0 0 0 0 0.03 0.59 5 0 0 5 0 3 16 7 8 81.53 99.82 0.13 0 0 1 Whitelist BLCA-US 0.41 0.81 0 0 0.33 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 4 86952991 87688478 1 3 207 3 0 0 0 0 0.03 0.12 3 0 0 NA NA NA 6 0 3 81.53 79.9 20 0 1 2 Whitelist BLCA-US 0.41 0.31 0 0 0.33 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 5 58873227 167624439 1 6 207 4 2 0 0 0 0.06 0.11 13 0 0 13 4 13 13 4 4 81.53 98.62 1.24 4 3 2 Whitelist BLCA-US 0.54 0.29 0 0 0.48 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 6 18975320 21877170 3 6 207 1 0 2 0 3 0.3 1 9 0 0 9 3 4 16 3 6 81.53 99.85 0 0 5 3 Whitelist BLCA-US 0.93 1 0 0 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 7 35783705 146017617 1 5 207 1 0 0 1 3 0.57 0.88 12 0 0 12 7 10 16 7 10 81.53 96.55 0.71 13 6 4 Whitelist BLCA-US 1 0.93 1 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 8 39397556 107567059 3 3 207 1 0 2 0 0 0.3 0.75 13 0 0 13 5 6 15 5 6 81.53 71.72 24.85 2 5 3 Whitelist BLCA-US 0.62 0.92 0 0 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 9 81687072 108896813 4 9 207 0 2 1 1 5 0.57 0 11 0 0 11 4 7 26 7 9 81.53 99.19 0.11 0 3 4 Whitelist BLCA-US 0.85 0 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 13 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 10 NA NA 0 0 207 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BLCA-US NA 0.03 NA NA NA 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 11 43215596 134760626 6 6 207 0 1 2 3 0 0.34 0.87 13 0 0 13 5 7 14 5 7 81.53 64.47 31.86 11 5 6 Whitelist BLCA-US 0.62 1 0 0 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 12 25027321 30095802 6 6 207 0 3 0 3 0 0.11 0.1 16 0 0 16 3 4 26 8 8 81.53 96.26 0 0 8 5 Whitelist BLCA-US 0.54 0.26 0 0 0.48 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 13 19572059 38773114 1 11 207 2 1 1 3 4 0.67 0 18 0 0 18 4 5 23 5 7 81.53 50.98 49.02 0 4 5 Whitelist BLCA-US 0.68 0 0 0 0.74 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 18 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 14 69986812 70326714 2 2 207 0 0 1 1 0 0.57 0.23 2 0 0 NA NA NA 7 3 5 81.53 81.23 0.06 0 1 3 Whitelist BLCA-US 0.68 0.46 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 15 49451331 69967653 2 12 207 2 1 1 0 8 0.57 0 13 0 0 13 6 6 42 6 8 81.53 75.28 24.62 1 4 3 Whitelist BLCA-US 9 0.68 0 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 16 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 16 84556794 85711261 2 2 207 2 0 0 0 0 0.11 0.51 3 0 0 NA NA NA 13 3 3 81.53 74.38 25.57 0 2 4 Whitelist BLCA-US 0.54 0.75 0 0 0.48 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 17 54577328 56234034 1 1 207 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 6 6 6 81.53 95.57 0 0 3 4 Whitelist BLCA-US 0.62 0.63 NA NA 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 18 52510413 52945984 1 1 207 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 81.53 99.35 0.56 0 2 3 Whitelist BLCA-US 0.62 0.63 NA NA 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 19 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 20 35624547 35791538 2 2 207 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 5 5 5 81.53 99.01 0 3 3 4 Whitelist BLCA-US 0.68 1 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 21 32656675 32894952 1 1 207 1 0 0 0 0 0.39 0.33 2 0 NA NA NA NA NA NA NA 81.53 69.99 0 1 6 7 Whitelist BLCA-US 0.62 0.58 0 NA 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 22 30465610 35170134 2 3 207 0 0 1 1 1 0.57 0 5 0 0 5 0 3 15 3 4 81.53 61.55 38.45 0 2 4 Whitelist BLCA-US 0.87 0 0 0 0.64 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::556fcbc8-172a-4af1-8822-ae036e8d68e8 X 32096699 63967548 1 1 207 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 16 3 6 81.53 22.93 73.25 1 1 2 Whitelist BLCA-US 0.62 0.09 0 NA 0.59 0 No BLCA-US 556fcbc8-172a-4af1-8822-ae036e8d68e8 BLCA 0.58 3.53 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:3 4 BLCA-US DO536 TCGA-BL-A13J 556fcbc8-172a-4af1-8822-ae036e8d68e8 male deceased C67.4 65 81 NA NA Included Bladder-TCC BLCA US 1 2.66 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 1 60702848 61084580 1 1 13 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.02 0.15 99.51 0 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 2 0.08 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 2 204976392 231811832 1 1 13 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.02 0 99.9 0 2 NA Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 2 0.08 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 3 NA NA 0 0 13 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.46 NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 5 79259485 178300915 1 2 13 0 0 1 1 0 0.57 0.19 4 NA 0 4 3 4 5 3 3 10.02 6.06 93.81 0 2 1 Whitelist BLCA-US 0.68 0.42 NA 0 0.64 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 4 0.15 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 6 NA NA 0 0 13 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.78 NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 9 20369881 78644786 1 2 13 2 0 0 0 0 0.11 0.09 4 NA 0 4 4 4 5 5 5 10.02 99.96 0 0 0 1 Whitelist BLCA-US 0.54 0.25 NA 0 0.48 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 4 0.15 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 10 30552331 32306244 1 1 13 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 10.02 0 99.81 1 2 NA Whitelist BLCA-US 0.62 0.7 NA NA 0.59 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 2 0.08 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 12 46250671 46406982 1 1 13 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 10.02 0 99.88 0 2 NA Whitelist BLCA-US 0.62 0.71 NA NA 0.59 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 2 0.08 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 13 95724732 105671057 1 3 13 1 0 0 0 2 0.39 0.01 4 NA 0 4 4 4 5 5 5 10.02 4.99 95.01 7 1 2 Whitelist BLCA-US 0.87 0.04 NA 0 0.59 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 4 0.15 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 20 NA NA 0 0 13 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.49 NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::56d8a1b8-1268-4362-a7f1-77b76fbf1b59 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 BLCA 0.91 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO548 TCGA-DK-A1AA 56d8a1b8-1268-4362-a7f1-77b76fbf1b59 male alive C67.9 57 NA 214 NA Included Bladder-TCC BLCA US 0 7.04 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 1 39492660 116722898 18 24 175 2 4 6 6 6 0.49 0 39 0 0 39 4 5 42 4 5 77.66 99.47 0.53 22 3 23 Whitelist BLCA-US 4 0.68 0 0 0 0.64 1 Low confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC With other complex events 42 0.12 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 2 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 3 NA NA 0 0 175 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.21 0 NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 4 72403638 190385402 20 29 175 2 6 6 6 9 0.49 0 37 0 0 37 9 10 44 9 9 77.66 43.02 56.87 6 2 1 Whitelist BLCA-US 14 0.62 0 0 0 0.64 1 High confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC With other complex events 49 0.14 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 5 53081802 91886031 1 4 175 2 0 1 0 1 0.3 0.27 4 0 0 4 3 4 6 4 4 77.66 26.92 70.42 4 2 0 Whitelist BLCA-US 0.68 0.52 0 0 0.59 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 6 146601601 147198912 3 6 175 0 1 2 0 3 0.3 0 8 0 0 8 0 3 27 6 8 77.66 99.85 0 10 12 13 Whitelist BLCA-US 4 0.93 0.01 0 0 0.59 1 Linked to high confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC With other complex events 9 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 7 NA NA 0 0 175 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.01 NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 8 34674137 43378509 1 7 175 2 0 0 2 3 0.26 0.61 10 0 0 10 4 6 11 4 4 77.66 99.89 0 0 4 5 Whitelist BLCA-US 0.68 0.82 0 0 0.59 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 11 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 9 21397958 21435617 1 1 175 0 0 1 0 0 0.39 0.69 1 0 NA NA NA NA 4 0 0 77.66 49.45 49.87 0 4 NA Whitelist BLCA-US 0.62 0.89 0 NA 0.59 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 10 NA NA 0 0 175 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BLCA-US NA 0.1 NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 11 31360527 50598866 2 3 175 1 1 0 0 1 0.57 0.05 6 0 0 6 3 6 17 5 6 77.66 36.77 59.17 0 1 2 Whitelist BLCA-US 0.62 0.15 0 0 0.64 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 5 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 12 15725603 31961309 5 8 175 1 0 2 2 3 0.53 0.01 13 0 0 13 7 13 18 7 8 77.66 91.5 8.49 1 3 2 Whitelist BLCA-US 0.87 0.05 0 0 0.64 1 High confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC With other complex events 13 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 13 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 14 53927912 83098832 2 5 175 0 0 1 1 3 0.57 0.08 7 0 0 7 4 7 9 5 5 77.66 89.13 9.96 0 3 2 Whitelist BLCA-US 0.68 0.22 0 0 0.64 1 Linked to high confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC With other complex events 7 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 15 27078752 94689213 9 12 175 0 1 3 5 3 0.09 0 5 0 0 5 3 5 7 5 5 77.66 84.42 0 13 4 3 Whitelist BLCA-US 12 0.62 0 0 0 0.48 1 Linked to high confidence BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC After polyploidization 21 0.06 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 16 6476371 25976386 1 6 175 4 1 0 0 1 0.04 0 12 0 0 12 7 12 21 7 7 77.66 87.92 11.99 4 3 2 Whitelist BLCA-US 0.54 0.01 0 0 0.36 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 11 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 17 61155060 70220790 2 2 175 0 1 1 0 0 0.57 0 4 0 0 4 3 4 22 3 4 77.66 86.38 9.17 0 5 3 Whitelist BLCA-US 0.68 0.01 0 0 0.64 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 18 24060936 68986262 1 4 175 0 1 1 0 2 0.57 0.81 3 0 0 NA NA NA 6 0 3 77.66 94.37 0.99 13 3 4 Whitelist BLCA-US 0.68 0.96 0 0 0.64 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 19 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 20 8489185 8658145 1 1 175 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 77.66 99.01 0 1 3 4 Whitelist BLCA-US 0.62 0.81 NA NA 0.59 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 21 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 22 NA NA 0 0 175 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.9 NA NA NA 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::5d54c742-5a8e-4c40-8d62-95e75e210ab8 X 69478750 73836093 2 2 175 0 0 0 2 0 0.11 0.86 5 0 0 5 0 4 13 4 4 77.66 28.4 71.6 0 4 6 Whitelist BLCA-US 0.54 1 0 0 0.48 1 No BLCA-US 5d54c742-5a8e-4c40-8d62-95e75e210ab8 BLCA 0.6 3.23 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:3 3 BLCA-US DO496 TCGA-GD-A2C5 5d54c742-5a8e-4c40-8d62-95e75e210ab8 female alive C67.9 53 NA 235 NA Included Bladder-TCC BLCA US 0 7.73 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 1 42305320 42605449 2 2 145 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA NA NA NA 75.89 100 0 0 4 3 Whitelist BLCA-US 0.54 0.03 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 2 123740473 129875571 2 6 145 1 0 0 1 4 0.57 0.55 7 0 0 7 3 3 30 9 9 75.89 54.48 45.41 0 3 4 Whitelist BLCA-US 0.62 0.78 0 0 0.64 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 8 0.03 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 3 59944991 60561069 3 4 145 3 0 0 0 1 0.03 0.03 5 0 0 5 3 5 16 3 4 75.89 96.74 0.09 0 2 3 Whitelist BLCA-US 0.54 0.12 0 0 0.33 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 4 24568683 24594030 1 1 145 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 75.89 99.99 0 0 3 NA Whitelist BLCA-US 0.62 0.2 0 NA 0.59 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 5 20792209 82131886 1 3 145 2 0 0 0 1 0.11 0.86 4 0 0 4 0 3 5 3 3 75.89 97.31 0 2 1 3 Whitelist BLCA-US 0.62 1 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 5 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 6 163806734 163945785 4 4 145 4 0 0 0 0 0.01 0 1 0 0 NA NA NA 23 4 4 75.89 82.6 14.57 1 4 NA Whitelist BLCA-US 0.21 0.02 0 0 0.16 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 8 0.03 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 7 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 8 141663255 141891907 1 2 145 2 0 0 0 0 0.11 0.13 2 0 0 NA NA NA 4 4 4 75.89 99.99 0 1 3 4 Whitelist BLCA-US 0.54 0.32 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 9 97181989 137273253 1 2 145 2 0 0 0 0 0.11 0.52 4 0 0 4 4 4 7 6 6 75.89 84.56 14.74 0 3 4 Whitelist BLCA-US 0.54 0.76 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 10 62490710 109620291 1 7 145 1 1 1 1 3 1 0.32 9 0 0 9 3 7 14 3 4 75.89 40.91 58.87 0 2 3 Whitelist BLCA-US 0.96 0.57 0 0 1 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 11 0.04 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 11 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 12 116575783 116691078 1 1 145 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 6 4 6 75.89 72.13 27.79 0 2 3 Whitelist BLCA-US 0.62 0.38 NA NA 0.59 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 13 21033268 104354353 14 29 145 4 3 2 5 15 0.7 0 41 0 0 41 10 27 42 10 12 75.89 49.26 50.74 12 2 3 Whitelist BLCA-US 20 0.68 0 0 0 0.78 1 High confidence BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC With other complex events 43 0.15 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 14 102568817 102616396 1 1 145 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 75.89 99.09 0 0 3 NA Whitelist BLCA-US 0.62 0.59 NA NA 0.59 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 15 35259852 69103437 1 3 145 1 0 1 1 0 0.8 1 3 0 0 NA NA NA 5 5 5 75.89 99.25 0.65 1 3 2 Whitelist BLCA-US 0.87 1 0 0 0.84 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 16 9041141 72965548 1 3 145 2 1 0 0 0 0.3 0.29 11 0 0 11 4 5 14 4 6 75.89 92.16 7.68 5 3 5 Whitelist BLCA-US 0.62 0.54 0 0 0.59 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 17 70429745 70699640 4 5 145 3 0 1 0 1 0.11 0 7 0 0 7 3 6 39 7 9 75.89 39.51 55.21 0 5 6 Whitelist BLCA-US 0.62 0 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 9 0.03 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 18 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 19 10724434 41284317 1 4 145 3 1 0 0 0 0.11 0.22 11 0 0 11 5 9 12 5 5 75.89 61.82 29.65 8 7 8 Whitelist BLCA-US 0.54 0.44 0 0 0.48 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 8 0.03 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 20 24187366 56783859 6 14 145 3 1 2 0 8 0.34 0 16 0 0 16 16 16 20 18 18 75.89 90.58 1.71 7 3 4 Whitelist BLCA-US 13 0.62 0 0 0 0.59 1 High confidence BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC After polyploidization 20 0.07 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 21 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 22 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::797a71ee-372d-41e5-aeee-5ab3c4661110 X 106936711 107083366 1 1 145 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 4 4 75.89 1.83 98.17 0 1 2 Whitelist BLCA-US 0.62 0.05 NA NA 0.59 1 No BLCA-US 797a71ee-372d-41e5-aeee-5ab3c4661110 BLCA 0.93 3.26 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578211_T_C,CN:2 3 BLCA-US DO561 TCGA-BT-A2LA 797a71ee-372d-41e5-aeee-5ab3c4661110 male alive C67.1 54 NA 180 NA Included Bladder-TCC BLCA US 0 5.92 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 1 NA NA 0 0 42 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.63 0 NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 2 14430150 14457746 1 1 42 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA 5 5 5 14.13 0.11 99.8 0 1 2 Whitelist BLCA-US 0.62 0.5 NA NA 0.59 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 3 59981351 60085718 1 1 42 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 14.13 0 99.86 0 2 NA Whitelist BLCA-US 0.62 0.93 NA NA 0.59 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 4 1845963 29626771 3 4 42 1 0 1 1 1 0.8 0 4 0 0 4 3 4 9 7 7 14.13 3.6 96.36 0 2 1 Whitelist BLCA-US 1 0 0 0 0.84 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 7 0.08 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 5 59501705 59516746 1 1 42 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 14.13 0 99.87 0 2 NA Whitelist BLCA-US 0.62 0.76 NA NA 0.59 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 6 36264069 39615933 1 1 42 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA 5 5 5 14.13 8.22 91.6 0 1 2 Whitelist BLCA-US 0.62 0.91 NA NA 0.59 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 7 102693408 103327478 1 1 42 1 0 0 0 0 0.39 0.49 2 0 NA NA NA NA NA NA NA 14.13 0.4 99.38 5 1 2 Whitelist BLCA-US 0.62 0.74 0 NA 0.59 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 8 92070376 140245184 1 2 42 2 0 0 0 0 0.11 0.16 2 0 0 NA NA NA NA NA NA 14.13 0.62 99.37 4 1 2 Whitelist BLCA-US 0.54 0.37 0 0 0.48 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 4 0.05 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 9 8710209 35387067 1 3 42 1 0 1 1 0 0.8 0.08 7 0 0 7 3 7 8 4 4 14.13 92.86 6.44 12 1 2 Whitelist BLCA-US 0.87 0.23 0 0 0.84 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 6 0.07 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 10 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 11 NA NA 0 0 42 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.9 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 12 99436890 133381181 2 2 42 1 0 0 1 0 0.57 0.13 4 0 0 4 4 4 6 6 6 14.13 3.6 96.03 1 1 2 Whitelist BLCA-US 0.68 0.32 0 0 0.64 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 4 0.05 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 13 37377983 72125413 1 2 42 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 5 5 14.13 0.43 99.57 0 1 2 Whitelist BLCA-US 0.54 0.86 NA 0 0.48 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 4 0.05 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 15 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 16 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 17 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 18 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 19 NA NA 0 0 42 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.79 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 20 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 21 NA NA 0 0 42 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.65 NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::7fee9d6f-c0ea-43c2-89c2-66d965a077a8 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 BLCA 0.99 1.85 Bladder-TCC NA 0 0 NA 2 BLCA-US DO828 TCGA-CF-A27C 7fee9d6f-c0ea-43c2-89c2-66d965a077a8 male alive C67.9 52 NA 21 NA Included Bladder-TCC BLCA US 0 0.69 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 1 72196042 98403292 1 3 80 1 1 0 0 1 0.57 0.53 1 0 0 NA NA NA NA NA NA 7.05 0 99.68 0 2 NA Whitelist BLCA-US 0.62 0.76 0 0 0.64 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 5 0.03 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 2 141584579 142115557 2 2 80 2 0 0 0 0 0.11 0.32 7 0 0 7 6 7 12 6 9 7.05 0.31 99.6 0 0 1 Whitelist BLCA-US 0.54 0.57 0 0 0.48 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 3 60333723 60485494 2 2 80 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 11 8 8 7.05 0.23 99.72 1 1 0 Whitelist BLCA-US 0.54 0.06 0 0 0.48 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 4 87415070 164460176 1 4 80 3 1 0 0 0 0.11 0.66 8 0 0 8 6 8 9 7 7 7.05 0.14 99.85 1 2 1 Whitelist BLCA-US 0.54 0.87 0 0 0.48 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 8 0.05 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 5 59338652 59478628 1 1 80 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 7.05 0.08 99.79 0 1 2 Whitelist BLCA-US 0.62 0.19 NA NA 0.59 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 6 NA NA 0 0 80 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.26 NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 7 5163068 112416677 10 10 80 2 3 3 2 0 0.94 0 35 0 0 35 5 5 40 5 5 7.05 43.47 56.27 1 2 9 Whitelist BLCA-US 0.96 0 0 0 0.96 0 Low confidence BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC With other complex events 20 0.12 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 8 3571782 3989005 2 2 80 2 0 0 0 0 0.11 0.02 2 0 0 NA NA NA 14 7 7 7.05 67.74 28.84 0 1 2 Whitelist BLCA-US 0.54 0.08 0 0 0.48 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 9 21901569 140183715 1 4 80 2 2 0 0 0 0.26 0.56 8 0 0 8 5 7 9 5 5 7.05 1.31 97.96 0 2 3 Whitelist BLCA-US 0.62 0.78 0 0 0.59 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 8 0.05 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 10 79135301 79203645 1 1 80 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 7.05 0.05 99.84 1 1 2 Whitelist BLCA-US 0.62 0.52 NA NA 0.59 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 11 NA NA 0 0 80 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.81 NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 12 NA NA 0 0 80 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.41 NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 13 NA NA 0 0 80 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.76 NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 14 67638673 67782311 1 1 80 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 7.05 45.37 53.71 0 3 4 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 2 0.01 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 15 NA NA 0 0 80 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.9 NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 16 4110445 83830643 1 2 80 0 2 0 0 0 0.11 1 4 NA 0.04 4 4 4 5 5 5 7.05 0.4 99.5 1 2 3 Whitelist BLCA-US 0.54 1 NA 0.04 0.48 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 4 0.02 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 17 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 18 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 19 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 20 8082125 34184225 1 3 80 3 0 0 0 0 0.03 0.25 4 0 0 4 4 4 5 5 5 7.05 0.45 98.58 0 1 2 Whitelist BLCA-US 0.41 0.49 0 0 0.33 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 6 0.04 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 21 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 22 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 X NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 BLCA 0.84 2.09 Bladder-TCC NA 0 0 NA 2 BLCA-US DO575 TCGA-FD-A3N6 8c1dd7f7-b74a-4fa2-b6a7-86f0348d2567 female alive C67.3 43 NA 242 NA Included Bladder-TCC BLCA US 0 7.96 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 1 153700997 160630766 2 4 274 1 0 1 0 2 0.57 0.06 6 0 0 6 0 4 11 3 5 64.79 99.97 0 4 4 5 Whitelist BLCA-US 8 1 0.18 0 0 0.64 1 Linked to high confidence BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC With other complex events 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 2 230026514 240452275 2 2 274 1 1 0 0 0 0.57 0.33 4 0 0 4 3 4 24 7 7 64.79 70.02 27.28 5 2 1 Whitelist BLCA-US 0.68 0.58 0 0 0.64 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 3 1555799 137115914 1 10 274 7 0 0 0 3 0 0.16 13 0 0 13 7 7 14 7 8 64.79 96.52 3.43 36 3 2 Whitelist BLCA-US 0.07 0.36 0 0 0.01 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 17 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 4 181460492 181837835 3 3 274 3 0 0 0 0 0.03 0.23 4 0 0 4 3 4 12 4 4 64.79 99.75 0.15 17 2 1 Whitelist BLCA-US 0.41 0.46 0 0 0.33 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 5 16163504 91253144 1 3 274 1 2 0 0 0 0.3 0.04 4 0 0 4 4 4 4 4 4 64.79 25.48 71.82 13 2 3 Whitelist BLCA-US 0.62 0.15 0 0 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 6 97784151 135377810 1 2 274 0 2 0 0 0 0.11 0 1 0 0 NA NA NA 4 4 4 64.79 96.81 0 18 3 NA Whitelist BLCA-US 0.54 0.01 0 0 0.48 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 7 67027597 102763105 11 42 274 3 2 4 2 31 0.8 0 15 0 0 15 3 5 21 3 3 64.79 49.37 50.51 5 2 4 Whitelist BLCA-US 0.87 0 0 0 0.84 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 53 0.1 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 8 5291228 33089595 12 13 274 4 1 4 3 1 0.57 0.01 14 0 0 14 11 14 28 11 15 64.79 74.93 21.53 6 2 4 Whitelist BLCA-US 0.68 0.03 0 0 0.64 1 High confidence BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC Before polyploidization 25 0.05 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 9 9818519 96905212 1 4 274 2 1 0 0 1 0.3 0.08 7 0.03 0 7 3 7 8 4 4 64.79 7.34 91.97 24 2 3 Whitelist BLCA-US 0.68 0.24 0.03 0 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 7 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 10 8065655 8077077 1 1 274 0 0 1 0 0 0.39 0.01 1 NA NA NA NA NA 6 4 5 64.79 39.01 60.81 0 4 NA Whitelist BLCA-US 0.62 0.04 NA NA 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 11 70052278 70316839 2 4 274 0 0 0 2 2 0.11 0.15 4 0 0 4 0 3 18 3 4 64.79 4.81 94.63 0 29 30 Whitelist BLCA-US 0.54 0.35 0 0 0.48 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 12 133748402 133759333 1 1 274 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 64.79 96.19 0 11 4 NA Whitelist BLCA-US 0.62 0 NA NA 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 13 99518209 99576425 1 1 274 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 64.79 59.58 40.42 0 2 NA Whitelist BLCA-US 0.62 0.4 NA NA 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 14 NA NA 0 0 274 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 15 35211373 35228878 1 1 274 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 64.79 100 0 0 4 5 Whitelist BLCA-US 0.62 0.04 NA NA 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 16 70993199 81194914 2 2 274 0 0 1 1 0 0.57 0.02 12 0 0 12 5 6 27 6 6 64.79 85.5 9.98 1 4 7 Whitelist BLCA-US 0.68 0.09 0 0 0.64 1 Linked to low confidence BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC With other complex events 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 17 34199415 58666962 29 74 274 5 9 7 8 45 0.75 0 17 0 0 17 4 4 22 5 7 64.79 76.56 23.42 5 3 49 Whitelist BLCA-US 16 0.98 0 0 0 0.83 1 Low confidence BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC With other complex events 103 0.19 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 18 NA NA 0 0 274 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 19 NA NA 0 0 274 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BLCA-US NA 1 0 NA NA 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 20 8259129 14942490 1 2 274 2 0 0 0 0 0.11 1 3 0.1 0 NA NA NA 6 3 3 64.79 91.47 0 0 4 3 Whitelist BLCA-US 0.54 1 0.1 0 0.48 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 21 14511470 48074038 39 40 274 12 11 8 8 1 0.73 0 43 0 0 43 14 16 43 14 16 64.79 61.71 15.52 25 3 2 Whitelist BLCA-US 0.87 0 0 0 0.81 1 High confidence BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC With other complex events 79 0.14 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 22 32991210 41707960 1 4 274 1 1 0 0 2 0.57 0.27 4 0 0 4 4 4 5 5 5 64.79 84.55 15.45 0 2 3 Whitelist BLCA-US 0.68 0.51 0 0 0.64 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::904a8757-e0c5-41ef-b583-c8f170caaac1 X 7449991 128782797 1 3 274 1 2 0 0 0 0.3 0 9 0 0 9 5 7 10 5 7 64.79 48.11 51.89 21 1 3 Whitelist BLCA-US 0.62 0.02 0 0 0.59 1 No BLCA-US 904a8757-e0c5-41ef-b583-c8f170caaac1 BLCA 0.6 2.92 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BLCA-US DO477 TCGA-DK-A1A5 904a8757-e0c5-41ef-b583-c8f170caaac1 male deceased C67.9 79 65 NA NA Included Bladder-TCC BLCA US 1 2.14 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 1 45736185 46230513 1 1 65 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 10 6 6 84.16 99.98 0 0 4 5 Whitelist BLCA-US 0.62 0 0 NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 2 128353855 192784266 2 6 65 0 2 1 1 2 0.57 0 11 0 0 11 4 4 13 4 4 84.16 56.51 43.39 8 2 4 Whitelist BLCA-US 0.62 0 0 0 0.64 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 10 0.08 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 3 38504426 196762643 1 5 65 2 2 0 1 0 0.53 0.46 11 0 0 11 3 6 12 4 6 84.16 99.86 0 44 5 6 Whitelist BLCA-US 0.68 0.7 0 0 0.64 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 10 0.08 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 4 101717199 101805592 1 1 65 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 84.16 99.78 0 0 3 4 Whitelist BLCA-US 0.62 0.58 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 5 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 6 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 7 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 8 21548102 22450769 1 1 65 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 84.16 99.99 0 0 4 6 Whitelist BLCA-US 0.62 0.51 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 9 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 10 5342660 124207189 1 3 65 0 2 0 0 1 0.11 1 5 NA 0.01 5 3 5 6 4 4 84.16 99.82 0 40 5 4 Whitelist BLCA-US 0.41 1 NA 0.01 0.48 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 5 0.04 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 11 66483189 70226201 3 14 65 2 0 1 0 11 0.3 0 15 0 0 15 3 4 19 3 3 84.16 52.67 46.9 0 12 5 Whitelist BLCA-US 0.81 0 0 0 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 17 0.13 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 12 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 13 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 14 23333219 23918104 1 1 65 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 84.16 99.09 0 0 4 5 Whitelist BLCA-US 0.62 0.9 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 15 38592655 39186819 1 1 65 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA 4 3 3 84.16 99.9 0 0 4 5 Whitelist BLCA-US 0.62 0.9 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 16 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 17 48913055 49149787 1 1 65 0 1 0 0 0 0.39 0.1 2 0 NA NA NA NA 10 5 8 84.16 68.22 27.34 0 4 5 Whitelist BLCA-US 0.62 0.26 0 NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 18 61255705 61808728 1 1 65 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.16 99.96 0 0 4 5 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 19 36391447 36576328 1 1 65 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 3 5 84.16 92.39 7.44 0 3 5 Whitelist BLCA-US 0.62 0.33 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 20 35651823 36214723 1 1 65 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.16 99.02 0 0 4 5 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 21 NA NA 0 0 65 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.41 NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 22 21721087 21930466 1 1 65 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 84.16 100 0 0 6 NA Whitelist BLCA-US 0.62 0.77 NA NA 0.59 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 2 0.02 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::932bcdd4-5145-49e8-9a95-8a546396f572 X NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US 932bcdd4-5145-49e8-9a95-8a546396f572 BLCA 0.81 3.56 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577127_T_C,CN:2 4 BLCA-US DO856 TCGA-BT-A3PH 932bcdd4-5145-49e8-9a95-8a546396f572 male deceased C67.9 76 142 NA NA Included Bladder-TCC BLCA US 1 4.67 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 1 31678120 32256839 3 3 270 1 2 0 0 0 0.3 0.04 5 0 0 5 0 4 18 4 4 77.48 84.53 15.47 0 2 3 Whitelist BLCA-US 0.62 0.14 0 0 0.59 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 6 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 2 141810078 165326330 1 6 270 1 1 1 0 3 0.8 0.83 8 0 0 8 4 4 12 4 5 77.48 97.31 0 14 6 7 Whitelist BLCA-US 0.93 0.97 0 0 0.84 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 9 0.02 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 3 161274132 161294859 2 2 270 1 1 0 0 0 0.57 0 2 0 0 NA NA NA 10 3 3 77.48 79.67 20.3 4 6 7 Whitelist BLCA-US 0.68 0.01 0 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 4 20348313 91466089 1 2 270 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 4 3 3 77.48 99.9 0 17 3 4 Whitelist BLCA-US 0.54 0 0 0 0.48 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 5 14580436 15469166 1 1 270 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 77.48 99.86 0 2 1 3 Whitelist BLCA-US 0.62 0 NA NA 0.59 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 2 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 6 13528745 27870962 2 5 270 0 0 1 1 3 0.57 0.25 24 0 0 24 3 5 30 3 5 77.48 37.38 62.49 0 7 8 Whitelist BLCA-US 0.62 0.49 0 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 7 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 7 33145840 33709470 1 1 270 1 0 0 0 0 0.39 0 2 0.01 NA NA NA NA NA NA NA 77.48 99.41 0.35 2 2 3 Whitelist BLCA-US 0.62 0.01 0.01 NA 0.59 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 2 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 8 40629167 102330843 20 34 270 6 2 6 6 14 0.49 0 39 0 0 39 6 8 54 6 8 77.48 96.58 0 26 7 6 Whitelist BLCA-US 0.68 0 0 0 0.64 0 Low confidence BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC With other complex events 54 0.1 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 9 28418196 116185768 1 3 270 0 2 0 0 1 0.11 0.08 7 0 0 7 4 7 10 7 7 77.48 51.23 48.07 4 3 2 Whitelist BLCA-US 0.62 0.24 0 0 0.48 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 5 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 10 9775573 38103725 2 4 270 1 1 1 1 0 1 0.38 12 0 0 12 4 6 16 6 6 77.48 96.62 0 10 6 4 Whitelist BLCA-US 1 0.63 0 0 1 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 8 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 11 58799118 69868742 20 30 270 4 2 6 8 10 0.26 0 21 0 0 21 3 4 34 5 6 77.48 18.27 81.17 10 2 40 Whitelist BLCA-US 17 0.62 0 0 0 0.59 0 Linked to low confidence BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC With other complex events 50 0.09 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 12 11952302 57894297 1 2 270 0 2 0 0 0 0.11 0.39 2 0 0 NA NA NA 10 4 4 77.48 99.92 0 17 4 5 Whitelist BLCA-US 0.54 0.63 0 0 0.48 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 13 26024199 86050864 1 2 270 0 1 0 1 0 0.57 0.01 3 NA 0 NA NA NA 4 3 3 77.48 77.4 22.6 12 3 4 Whitelist BLCA-US 0.68 0.05 NA 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 14 68117597 103931923 1 4 270 1 1 0 0 2 0.57 0.16 4 0 0 4 3 4 5 3 3 77.48 98.75 0.34 10 3 2 Whitelist BLCA-US 1 0.36 0 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 6 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 15 51884301 52146110 1 1 270 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 6 3 4 77.48 87.62 7.6 0 3 4 Whitelist BLCA-US 0.62 0.33 NA NA 0.59 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 2 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 16 NA NA 0 0 270 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.17 NA NA NA 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 0 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 17 11629450 33500976 37 45 270 10 9 8 10 8 0.96 0 34 0 0 34 6 7 47 6 8 77.48 91.51 4.04 18 2 5 Whitelist BLCA-US 0.98 0 0 0 0.97 0 Low confidence BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC With other complex events 82 0.15 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 18 18605555 18621300 1 1 270 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 77.48 99.96 0 0 3 NA Whitelist BLCA-US 0.62 0.18 NA NA 0.59 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 2 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 19 20166621 58928613 1 11 270 1 1 0 2 7 0.57 0 11 0 0 11 3 4 16 3 5 77.48 92.39 0.27 41 5 4 Whitelist BLCA-US 17 0.68 0 0 0 0.64 0 Linked to low confidence BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC With other complex events 15 0.03 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 20 55785201 55817854 2 2 270 1 1 0 0 0 0.57 0.14 3 NA 0 NA NA NA 5 3 3 77.48 93.62 0 0 6 7 Whitelist BLCA-US 0.68 0.33 NA 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 21 20194615 20299715 2 2 270 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 15 3 4 77.48 70.71 0 0 27 29 Whitelist BLCA-US 0.68 0 0 0 0.64 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 4 0.01 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f 22 NA NA 0 0 270 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.93 NA NA NA 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 0 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::9c274536-3ca1-4f0e-93a8-1688074d862f X NA NA 0 0 270 0 0 0 0 0 NA 0.04 NA 0.22 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BLCA-US NA 0.13 0.23 NA NA 0 No BLCA-US 9c274536-3ca1-4f0e-93a8-1688074d862f BLCA 0.71 3.43 Bladder-TCC NA 0 0 frameshift_insertion,17_7579315_C_-,CN:3 4 BLCA-US DO472 TCGA-DK-A1A6 9c274536-3ca1-4f0e-93a8-1688074d862f male alive C67.9 53 NA 955 NA Included Bladder-TCC BLCA US 0 31.41 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 1 73173202 73302761 1 1 98 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 75 96.98 0 0 3 NA Whitelist BLCA-US 0.62 0.09 NA NA 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 2 188408454 241407845 1 3 98 1 2 0 0 0 0.3 0.85 8 0 0 8 5 7 9 5 7 75 86.33 13.57 1 2 3 Whitelist BLCA-US 0.62 0.99 0 0 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 6 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 3 7299716 88508104 3 6 98 0 1 1 1 3 0.8 0.07 11 0 0 11 6 6 17 7 7 75 42.79 54.14 2 2 3 Whitelist BLCA-US 0.62 0.21 0 0 0.84 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 9 0.05 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 4 13138718 65219796 1 2 98 1 1 0 0 0 0.57 0.07 4 NA 0 4 3 4 5 3 3 75 99.96 0.02 0 3 2 Whitelist BLCA-US 0.68 0.2 NA 0 0.64 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 5 174436974 176039216 3 3 98 1 0 0 2 0 0.3 0.83 2 0 0 NA NA NA 6 3 3 75 25.61 71.72 0 2 3 Whitelist BLCA-US 0.62 0.97 0 0 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 6 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 6 19958206 22511114 4 5 98 1 2 0 1 1 0.57 0.09 8 0 0 8 0 3 13 3 3 75 92.63 7.13 0 2 26 Whitelist BLCA-US 0.68 0.24 0 0 0.64 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 9 0.05 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 7 7608926 62630300 15 17 98 0 9 5 1 2 0 0 31 0 0 31 3 4 34 4 4 75 97.45 0 14 3 5 Whitelist BLCA-US 0.25 0 0 0 0.12 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 32 0.16 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 8 133392692 133992887 3 3 98 1 1 0 1 0 0.8 1 4 0 0 4 4 4 7 4 4 75 66.99 29.58 2 3 4 Whitelist BLCA-US 0.87 1 0 0 0.84 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 6 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 9 NA NA 0 0 98 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BLCA-US NA 0.81 NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 10 18475831 81186784 2 2 98 1 0 1 0 0 0.57 0.46 6 0 0 6 3 3 8 3 3 75 42.39 54.28 0 6 11 Whitelist BLCA-US 0.68 0.71 0 0 0.64 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 11 31469518 31587454 1 1 98 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 75 99.49 0.09 1 2 3 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 12 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 13 55679488 55691163 2 2 98 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA 4 0 3 75 97.13 2.87 0 4 NA Whitelist BLCA-US 0.68 0.36 0 0 0.64 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 14 NA NA 0 0 98 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.63 NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 16 19572517 78649989 1 3 98 2 1 0 0 0 0.3 0.75 6 0 0 6 3 6 7 3 3 75 94.85 5.05 0 3 2 Whitelist BLCA-US 0.62 0.92 0 0 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 6 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 17 NA NA 0 0 98 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.76 NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 18 28027210 68069915 1 8 98 1 0 2 2 3 0.53 0 9 0 0 9 4 8 10 4 6 75 99.96 0 0 4 3 Whitelist BLCA-US 0.68 0 0 0 0.64 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 13 0.07 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 19 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 20 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 21 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb 22 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::a658becf-3934-49f2-9e74-291dca61d4bb X 6828998 96655995 1 4 98 2 2 0 0 0 0.26 0.82 7 0 0 7 4 5 8 4 6 75 0.28 99.72 0 2 1 Whitelist BLCA-US 0.62 0.96 0 0 0.59 0 No BLCA-US a658becf-3934-49f2-9e74-291dca61d4bb BLCA 0.69 3.11 Bladder-TCC NA 8 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 BLCA-US DO639 TCGA-FD-A3N5 a658becf-3934-49f2-9e74-291dca61d4bb male alive C67.4 69 NA 272 NA Included Bladder-TCC BLCA US 0 8.95 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 1 168849602 235165090 30 38 231 11 7 6 6 8 0.52 0 72 0 0 72 6 8 92 6 11 67.11 90.35 9.65 1 4 2 Whitelist BLCA-US 3 0.73 0 0 0 0.64 0 Low confidence BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC With other complex events 68 0.15 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 2 67774431 159000430 2 2 231 0 0 1 1 0 0.57 0.01 10 0 0 10 3 5 29 6 6 67.11 63.16 34.14 0 2 4 Whitelist BLCA-US 0.68 0.05 0 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 3 330518 149204906 1 9 231 2 1 1 2 3 0.88 0.7 41 0 0 41 8 13 45 8 13 67.11 86.6 13.29 3 4 2 Whitelist BLCA-US 1 0.97 0.89 0 0 0.91 0 Linked to low confidence BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC With other complex events 15 0.03 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 4 43498904 46885063 3 3 231 0 1 1 1 0 0.8 0.51 3 0 0 NA NA NA 33 3 5 67.11 29.22 68.14 0 1 2 Whitelist BLCA-US 0.87 0.75 0 0 0.84 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 6 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 5 4036691 10744216 1 1 231 0 0 1 0 0 0.39 0.17 2 0 NA NA NA NA 17 5 9 67.11 77.96 19.35 0 5 7 Whitelist BLCA-US 0.62 0.39 0 NA 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 2 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 6 64733375 70549819 1 5 231 1 1 0 0 3 0.57 0.21 8 0 0 8 3 4 14 5 6 67.11 93.33 3.39 0 2 3 Whitelist BLCA-US 0.68 0.44 0 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 7 7489162 138751893 28 31 231 6 6 7 9 3 0.84 0 66 0 0 66 6 8 70 6 8 67.11 90.85 6.29 2 3 4 Whitelist BLCA-US 0.87 0 0 0 0.88 0 Low confidence BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC With other complex events 59 0.13 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 8 18089306 41911430 3 6 231 2 1 0 0 3 0.3 0 11 0 0 11 3 4 49 7 7 67.11 86.59 9.89 2 6 1 Whitelist BLCA-US 20 0.54 0.01 0 0 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 9 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 9 20933966 30811653 1 2 231 0 0 1 0 1 0.39 0.04 3 NA NA NA NA NA 7 5 7 67.11 9.12 90.88 0 0 2 Whitelist BLCA-US 0.68 0.14 NA NA 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 3 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 10 NA NA 0 0 231 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 8 4 5 0 0 0 0 0 0 Whitelist BLCA-US NA 0.13 NA NA NA 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 11 16519438 22662751 1 2 231 1 0 1 0 0 0.57 0.03 5 0.06 0 5 4 5 14 7 9 67.11 19 80.86 0 2 3 Whitelist BLCA-US 0.68 0.11 0.06 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 12 9834559 30019814 1 2 231 1 0 0 0 1 0.39 0.03 2 0 NA NA NA NA 10 4 5 67.11 90.27 5.98 0 1 2 Whitelist BLCA-US 0.68 0.11 0 NA 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 3 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 13 31283559 99150596 2 3 231 1 1 0 0 1 0.57 0.1 5 NA 0 5 3 5 7 3 3 67.11 27.52 69.7 2 2 1 Whitelist BLCA-US 0.87 0.26 NA 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 5 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 14 34967294 99710526 16 20 231 4 4 4 4 4 1 0 13 0 0 13 4 4 14 4 4 67.11 73.05 26.95 9 4 3 Whitelist BLCA-US 0.96 0 0 0 1 0 Low confidence BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC With other complex events 36 0.08 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 15 56448892 58766921 2 7 231 1 1 0 0 5 0.57 0.07 5 0 0 5 3 3 12 3 3 67.11 41.93 53.29 0 2 6 Whitelist BLCA-US 20 0.77 0.21 0 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 9 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 16 27283431 30129912 1 2 231 1 0 0 1 0 0.57 0.41 2 0 0 NA NA NA 15 6 6 67.11 66.76 28.6 0 8 10 Whitelist BLCA-US 0.68 0.66 0 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 17 72127607 77033223 3 4 231 0 0 2 1 1 0.3 0.06 9 0 0 9 0 5 15 5 5 67.11 95.57 0 0 8 3 Whitelist BLCA-US 0.68 0.2 0 0 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 18 NA NA 0 0 231 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist BLCA-US NA 0.55 NA NA NA 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 19 NA NA 0 0 231 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.85 NA NA NA 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 20 230959 14783523 3 10 231 2 1 0 0 7 0.3 0 21 0 0 21 5 5 32 5 5 67.11 66.06 27.77 2 7 8 Whitelist BLCA-US 0.96 0 0 0 0.59 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 13 0.03 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 21 NA NA 0 0 231 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.77 NA NA NA 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d 22 26089094 29748828 2 2 231 0 0 1 1 0 0.57 0.76 1 NA 0 NA NA NA 4 3 3 67.11 87.33 1.56 0 3 NA Whitelist BLCA-US 0.68 0.92 NA 0 0.64 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::ca554128-da9d-4f37-9560-ca083509e01d X NA NA 0 0 231 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US ca554128-da9d-4f37-9560-ca083509e01d BLCA 0.79 3.15 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:3 4 BLCA-US DO669 TCGA-C4-A0F7 ca554128-da9d-4f37-9560-ca083509e01d male deceased C67.9 77 62 NA NA Included Bladder-TCC BLCA US 1 2.04 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 1 161196064 161310098 3 3 180 1 1 1 0 0 0.8 0.27 5 0 0 5 0 3 32 3 5 80.22 76.15 23.85 3 18 20 Whitelist BLCA-US 0.87 0.51 0 0 0.84 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 2 7626198 142217441 1 3 180 1 2 0 0 0 0.3 0 6 0 0 6 3 4 6 3 3 80.22 99.7 0.21 47 3 4 Whitelist BLCA-US 0.62 0.01 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 3 61239441 61764016 1 1 180 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA 4 4 4 80.22 99.97 0 0 3 4 Whitelist BLCA-US 0.62 0.18 0 NA 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 4 2739956 91980949 1 7 180 3 3 0 0 1 0.11 0.65 12 0 0 12 6 9 13 6 9 80.22 99.77 0.22 29 3 2 Whitelist BLCA-US 0.62 0.86 0 0 0.48 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 13 0.04 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 5 17216381 94290686 1 7 180 0 4 0 0 3 0.01 0.44 9 0 0 9 4 6 11 5 7 80.22 25.49 71.84 15 8 2 Whitelist BLCA-US 0.62 0.69 0 0 0.16 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 11 0.03 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 6 4117928 148735833 1 5 180 1 1 0 2 1 0.57 0.64 17 0 0 17 3 6 19 3 3 80.22 96.68 0.21 59 3 5 Whitelist BLCA-US 0.62 0.85 0 0 0.64 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 9 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 7 52381194 54974698 8 12 180 2 3 2 1 4 0.8 0 24 0 0 24 3 3 45 4 5 80.22 97.37 0 4 60 43 Whitelist BLCA-US 0.62 0 0 0 0.84 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 20 0.06 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 8 47026265 51150625 15 16 180 3 3 4 5 1 0.87 0 12 0 0 12 4 4 27 4 4 80.22 54.11 42.47 11 3 4 Whitelist BLCA-US 0.95 0 0 0 0.9 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 31 0.09 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 9 9252204 75250300 1 10 180 1 3 2 0 4 0.34 0.12 20 0 0 20 3 5 22 4 5 80.22 96.89 0 13 7 5 Whitelist BLCA-US 0.62 0.31 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 16 0.04 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 10 68614180 99409602 1 4 180 1 2 0 0 1 0.3 0.86 7 0 0 7 5 7 9 5 9 80.22 99.82 0 22 3 4 Whitelist BLCA-US 0.62 0.99 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 11 8003554 118726380 1 4 180 1 2 0 0 1 0.3 0.59 8 0 0 8 4 4 11 5 5 80.22 99.57 0 50 4 5 Whitelist BLCA-US 0.68 0.81 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 7 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 12 80066785 100037912 1 3 180 2 1 0 0 0 0.3 0.29 6 0 0 6 5 6 10 5 5 80.22 99.26 0.66 7 3 2 Whitelist BLCA-US 0.62 0.53 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 13 39221609 71838490 1 3 180 2 0 1 0 0 0.3 0.84 8 0 0 8 4 5 9 4 5 80.22 87.35 12.65 3 6 8 Whitelist BLCA-US 0.62 0.97 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 14 74425503 103186541 1 3 180 1 2 0 0 0 0.3 0.39 5 0 0 5 5 5 6 5 6 80.22 96.29 0 3 3 4 Whitelist BLCA-US 0.62 0.63 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 15 52969581 72608156 1 4 180 0 3 1 0 0 0.11 0.82 6 0 0 6 4 6 7 5 5 80.22 99.87 0.13 0 3 4 Whitelist BLCA-US 0.54 0.96 0 0 0.48 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 8 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 16 1981583 78451375 1 3 180 2 1 0 0 0 0.3 0.82 9 0 0 9 3 5 12 5 5 80.22 57.19 37.9 30 4 2 Whitelist BLCA-US 0.62 0.96 0 0 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 6 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 17 75866903 76916020 1 3 180 1 0 0 1 1 0.57 0.49 5 0 0 5 3 3 6 3 3 80.22 95.57 0 2 3 4 Whitelist BLCA-US 0.87 0.74 0 0 0.64 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 5 0.01 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 18 NA NA 0 0 180 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist BLCA-US NA 0.85 NA NA NA 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 19 NA NA 0 0 180 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.81 NA NA NA 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 0 0 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 20 14869732 15357858 2 2 180 2 0 0 0 0 0.11 0 5 0 0 5 3 5 18 3 4 80.22 92.58 0.42 2 2 1 Whitelist BLCA-US 0.54 0.01 0 0 0.48 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 4 0.01 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 21 46755369 47109217 1 1 180 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 80.22 77.35 0 0 3 4 Whitelist BLCA-US 0.62 0.91 NA NA 0.59 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 2 0.01 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a 22 28455091 36861209 1 3 180 1 1 0 0 1 0.57 0.02 5 0 0 5 3 5 9 3 3 80.22 80.06 19.94 0 6 3 Whitelist BLCA-US 0.87 0.08 0 0 0.64 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 5 0.01 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cb664eef-be6f-44ef-aa90-6f6da0e6440a X 6997375 127396294 1 4 180 2 1 1 0 0 0.57 0.09 10 0 0 10 4 10 11 4 4 80.22 6.93 93.07 11 2 1 Whitelist BLCA-US 0.68 0.25 0 0 0.64 0 No BLCA-US cb664eef-be6f-44ef-aa90-6f6da0e6440a BLCA 0.51 3.57 Bladder-TCC NA 8 0.02 nonsynonymous_SNV,17_7577108_A_C,CN:4 3 BLCA-US DO44097 TCGA-BT-A3PJ cb664eef-be6f-44ef-aa90-6f6da0e6440a male alive C67.2 76 NA 33 NA Included Bladder-TCC BLCA US 0 1.09 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 1 245505713 245572414 1 1 51 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 4 3 3 43.53 70.97 29.03 0 3 4 Whitelist BLCA-US 0.62 1 0 NA 0.59 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 2 49693883 49705189 1 1 51 1 0 0 0 0 0.39 0.8 1 0.58 NA NA NA NA 5 4 4 43.53 37.2 60.07 1 4 NA Whitelist BLCA-US 0.62 0.95 0.58 NA 0.59 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 3 1952556 2020307 2 2 51 0 1 1 0 0 0.57 0.09 3 0 0 NA NA NA 8 4 4 43.53 52.01 47.94 0 4 5 Whitelist BLCA-US 0.68 0.25 0 0 0.64 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 4 0.04 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 4 31109146 143082957 2 4 51 0 2 1 1 0 0.57 0 9 0 0 9 8 9 12 8 8 43.53 1.85 98.05 0 2 3 Whitelist BLCA-US 0.68 0.01 0 0 0.64 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 8 0.08 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 5 24195502 49588796 1 2 51 1 0 0 0 1 0.39 0.77 2 NA NA NA NA NA NA NA NA 43.53 99.88 0 0 3 4 Whitelist BLCA-US 0.68 0.93 NA NA 0.59 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 3 0.03 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 6 NA NA 0 0 51 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BLCA-US NA 0.93 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 7 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 8 30571985 37736332 2 2 51 0 0 1 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 43.53 74.9 25.09 0 2 4 Whitelist BLCA-US 0.68 0 0 0 0.64 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 4 0.04 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 10 83345714 84943401 2 2 51 0 0 1 1 0 0.57 0.08 2 0 0 NA NA NA 8 5 5 43.53 49.08 47.53 0 4 6 Whitelist BLCA-US 0.68 0.24 0 0 0.64 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 4 0.04 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 11 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.91 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 13 NA NA 0 0 51 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist BLCA-US NA 0.5 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 14 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 15 NA NA 0 0 51 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BLCA-US NA 0.86 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 16 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 17 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 18 NA NA 0 0 51 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.64 NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 0 0 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cce62116-3dcd-400d-ada0-9839ca02466e X 93768654 93802906 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 43.53 42.26 57.51 0 1 NA Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US cce62116-3dcd-400d-ada0-9839ca02466e BLCA 0.6 2.59 Bladder-TCC NA 2 0.02 NA 2 BLCA-US DO720 TCGA-FT-A3EE cce62116-3dcd-400d-ada0-9839ca02466e female deceased C67.5 80 99 NA NA Included Bladder-TCC BLCA US 1 3.26 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 1 160941143 161194697 3 3 206 0 2 0 1 0 0.3 0 3 0 0 NA NA NA 39 4 4 87.01 97.03 0 3 18 19 Whitelist BLCA-US 0.62 0 0 0 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 6 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 2 18845429 198389807 1 7 206 5 2 0 0 0 0.02 0.13 11 0 0 11 4 6 14 4 6 87.01 99.89 0 30 5 4 Whitelist BLCA-US 0.41 0.32 0 0 0.33 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 14 0.03 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 3 115762685 116645108 2 2 206 1 1 0 0 0 0.57 0.05 3 0 0 NA NA NA 33 4 7 87.01 96.63 0.22 0 1 3 Whitelist BLCA-US 0.68 0.17 0 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 4 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 4 135460473 140496477 3 3 206 0 1 1 1 0 0.8 0.09 6 0 0 6 3 6 29 8 15 87.01 98.43 1.47 2 3 2 Whitelist BLCA-US 0.87 0.25 0 0 0.84 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 6 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 5 1029944 167352084 1 7 206 4 2 0 0 1 0.06 0.67 11 0 0 11 3 4 12 3 4 87.01 97.33 0 30 3 6 Whitelist BLCA-US 0.62 0.87 0 0 0.48 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 13 0.03 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 6 8005862 161948529 1 7 206 3 1 0 1 2 0.28 0.24 11 0 0 11 3 11 12 4 4 87.01 83.73 16.13 8 3 4 Whitelist BLCA-US 0.77 0.48 0 0 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 12 0.03 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 7 2992157 105405952 1 4 206 4 0 0 0 0 0.01 1 10 0 0 10 5 6 11 5 7 87.01 99.78 0 21 5 3 Whitelist BLCA-US 0.21 1 0 0 0.16 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 8 0.02 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 8 86012517 121235666 2 2 206 1 1 0 0 0 0.57 0.63 2 0 0 NA NA NA 14 5 8 87.01 69.97 26.6 11 7 8 Whitelist BLCA-US 0.68 0.84 0 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 4 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 9 9708538 102910852 1 3 206 2 1 0 0 0 0.3 0.07 8 0.03 0 8 0 3 8 0 3 87.01 94.78 2.14 6 3 4 Whitelist BLCA-US 0.62 0.21 0.03 0 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 6 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 10 101985 34651034 1 3 206 2 0 0 1 0 0.3 0.03 7 0 0 7 3 5 8 3 5 87.01 96.57 0.12 3 3 1 Whitelist BLCA-US 0.62 0.11 0.01 0 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 6 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 11 106961134 130677658 1 2 206 2 0 0 0 0 0.11 0.41 4 0 0 4 4 4 10 5 5 87.01 90.87 4.56 0 2 4 Whitelist BLCA-US 0.54 0.65 0 0 0.48 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 4 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 12 58900850 74752411 1 8 206 0 1 2 1 4 0.57 0.01 15 0 0 15 3 4 22 3 4 87.01 99.92 0 11 5 15 Whitelist BLCA-US 0.87 0.05 0 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 12 0.03 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 13 33388908 83298805 1 4 206 1 3 0 0 0 0.11 0.7 3 0 0 NA NA NA 5 3 3 87.01 97.13 0 12 5 6 Whitelist BLCA-US 0.54 0.9 0 0 0.48 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 8 0.02 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 14 22158401 35097212 2 4 206 1 0 1 0 2 0.57 0.31 6 0 0 6 3 4 14 4 4 87.01 96.29 0 0 4 6 Whitelist BLCA-US 0.68 0.56 0 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 6 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 15 25977481 66243156 1 3 206 2 0 0 0 1 0.11 1 8 0 0 8 4 8 9 5 5 87.01 95.97 3.93 2 3 2 Whitelist BLCA-US 0.62 1 0 0 0.48 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 5 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 16 2946199 78961566 1 8 206 2 4 0 0 2 0.06 0.08 17 0 0 17 8 8 19 8 11 87.01 94.26 1.04 13 6 7 Whitelist BLCA-US 0.62 0.22 0 0 0.48 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 14 0.03 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 17 72881106 73064849 2 2 206 0 0 1 1 0 0.57 0.01 5 0 0 5 3 4 18 3 4 87.01 95.13 0 0 7 4 Whitelist BLCA-US 0.68 0.06 0 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 4 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 18 NA NA 0 0 206 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.16 NA NA NA 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 0 0 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 19 58905419 59017664 1 1 206 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 5 3 4 87.01 92.59 0 1 6 7 Whitelist BLCA-US 0.62 0.95 NA NA 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 2 0 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 20 2666053 9200558 2 2 206 0 0 1 1 0 0.57 1 5 0.44 0 5 3 3 7 4 4 87.01 99.01 0 5 7 8 Whitelist BLCA-US 0.68 1 0.44 0 0.64 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 4 0.01 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 21 NA NA 0 0 206 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BLCA-US NA 0.91 NA NA NA 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 0 0 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 22 30183886 30213653 1 1 206 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 87.01 100 0 0 3 4 Whitelist BLCA-US 0.62 0.76 NA NA 0.59 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 2 0 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::cede5274-279d-4021-8aca-5ecc4bf94d66 X 4963240 154964962 1 5 206 4 0 0 0 1 0.01 1 5 0 0 5 4 5 6 5 5 87.01 2.47 97.45 15 1 2 Whitelist BLCA-US 0.45 1 0 0 0.16 0 No BLCA-US cede5274-279d-4021-8aca-5ecc4bf94d66 BLCA 0.82 4.54 Bladder-TCC NA 9 0.02 NA 23 BLCA-US DO522 TCGA-H4-A2HQ cede5274-279d-4021-8aca-5ecc4bf94d66 female alive C67.9 64 NA 205 NA Included Bladder-TCC BLCA US 0 6.74 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 1 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 2 82560680 181154512 4 9 78 2 1 1 0 5 0.57 0 9 0 0 9 9 9 13 13 13 17.88 12.83 87.08 0 1 2 Whitelist BLCA-US 0.97 0 0 0 0.64 1 High confidence BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC Canonical without polyploidization 13 0.08 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 3 117170712 176580869 1 2 78 1 1 0 0 0 0.57 0.37 4 0 0 4 3 4 5 3 3 17.88 0.29 99.68 5 2 1 Whitelist BLCA-US 0.68 0.63 0 0 0.64 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 4 0.03 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 4 1636568 134126383 4 8 78 0 1 2 1 4 0.57 0 15 0 0 15 6 10 20 6 6 17.88 1.12 98.53 9 2 3 Whitelist BLCA-US 0.62 0 0 0 0.64 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 12 0.08 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 5 141615240 173816282 5 5 78 2 1 1 1 0 0.9 0.34 12 0 0 12 12 12 17 13 17 17.88 84.16 15.68 1 2 3 Whitelist BLCA-US 0.93 0.59 0 0 0.92 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 10 0.06 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 6 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 7 40025057 40182293 2 2 78 0 0 1 1 0 0.57 0.61 4 0 0 4 4 4 11 11 11 17.88 1.62 98.15 0 1 2 Whitelist BLCA-US 0.68 0.83 0 0 0.64 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 4 0.03 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 8 23770126 24836464 1 3 78 0 1 0 0 2 0.39 0.8 4 NA 0 4 4 4 5 5 5 17.88 0.72 99.27 0 2 3 Whitelist BLCA-US 2 0.87 0.95 NA 0 0.59 1 Linked to high confidence BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC Canonical without polyploidization 4 0.03 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 9 17438342 23139692 4 8 78 2 1 1 0 4 0.57 0 20 0 0 20 4 4 23 6 6 17.88 53.36 46.5 4 2 1 Whitelist BLCA-US 4 0.87 0 0 0 0.64 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 12 0.08 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 10 NA NA 0 0 78 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.1 0 NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 11 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 12 6577289 25406004 2 2 78 0 0 1 1 0 0.57 1 3 0.33 0 NA NA NA NA NA NA 17.88 86.14 13.78 0 3 2 Whitelist BLCA-US 0.68 1 0.33 0 0.64 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 4 0.03 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 13 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 14 27761020 69340395 1 2 78 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 17.88 1.42 97.66 3 1 2 Whitelist BLCA-US 0.54 1 NA 0 0.48 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 4 0.03 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 15 26663229 26780029 1 1 78 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 17.88 0.11 99.79 0 1 2 Whitelist BLCA-US 0.62 0.9 NA NA 0.59 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 2 0.01 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 16 79056571 79682502 1 1 78 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 17.88 0.69 99.21 0 2 3 Whitelist BLCA-US 0.62 0.9 NA NA 0.59 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 2 0.01 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 17 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 18 73609926 73718149 1 1 78 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 17.88 0.14 99.83 0 1 2 Whitelist BLCA-US 0.62 0.9 NA NA 0.59 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 2 0.01 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 19 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 1 NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 20 45533610 45735344 1 1 78 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 17.88 92.96 0 0 1 3 Whitelist BLCA-US 0.62 1 NA NA 0.59 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 2 0.01 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 21 NA NA 0 0 78 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BLCA-US NA 0.83 NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 22 NA NA 0 0 78 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.82 NA NA NA 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 0 0 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f48937ed-e294-41f0-8872-7010391167a9 X 13069241 148269767 1 10 78 5 0 0 2 3 0.02 0.01 20 0 0 20 20 20 21 21 21 17.88 19.58 77.04 6 1 2 Whitelist BLCA-US 4 0.62 0.03 0 0 0.33 1 No BLCA-US f48937ed-e294-41f0-8872-7010391167a9 BLCA 0.92 2.07 Bladder-TCC NA 17 0.11 NA 3 BLCA-US DO675 TCGA-BT-A20P f48937ed-e294-41f0-8872-7010391167a9 female deceased C67.0 81 544 NA NA Included Bladder-TCC BLCA US 1 17.89 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 1 2915767 9310214 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.86 2.57 97.12 0 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 2 0.06 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 2 213900563 237654143 1 4 18 3 1 0 0 0 0.11 0.06 7 0 0 7 4 7 7 4 4 9.86 2.63 97.27 0 1 2 Whitelist BLCA-US 0.54 0.18 0 0 0.48 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 8 0.22 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 3 21610154 71233233 1 2 18 2 0 0 0 0 0.11 0.13 1 0.02 0 NA NA NA NA NA NA 9.86 0 99.83 1 2 NA Whitelist BLCA-US 0.54 0.32 0.02 0 0.48 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 4 0.11 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 4 172490554 172725234 2 2 18 1 1 0 0 0 0.57 0.12 1 NA 0 NA NA NA NA NA NA 9.86 0 99.89 0 2 NA Whitelist BLCA-US 0.68 0.3 NA 0 0.64 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 4 0.11 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 7 21551755 21620826 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.86 0.04 99.93 3 1 2 Whitelist BLCA-US 0.62 1 NA NA 0.59 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 2 0.06 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 8 NA NA 0 0 18 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA 0.82 NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 9 21084029 22086554 1 2 18 2 0 0 0 0 0.11 0.16 3 NA 0 NA NA NA NA NA NA 9.86 99.88 0 0 1 0 Whitelist BLCA-US 0.54 0.36 NA 0 0.48 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 4 0.11 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 13 69732647 71025754 1 1 18 1 0 0 0 0 0.39 0.47 1 NA NA NA NA NA NA NA NA 9.86 0 99.85 0 2 NA Whitelist BLCA-US 0.62 0.71 NA NA 0.59 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 2 0.06 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 16 79013314 79159099 1 1 18 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 9.86 0 99.91 0 2 NA Whitelist BLCA-US 0.62 0.63 NA NA 0.59 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 2 0.06 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 20 4242548 5312678 1 1 18 1 0 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 9.86 0 99.9 0 2 NA Whitelist BLCA-US 0.62 0.58 NA NA 0.59 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 2 0.06 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BLCA-US::f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BLCA-US NA NA NA NA NA 0 No BLCA-US f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 BLCA 0.9 1.88 Bladder-TCC NA 0 0 NA 2 BLCA-US DO822 TCGA-DK-A1AG f8c0a69c-df53-4a0a-a30e-4424c0ce3dd5 male alive C67.9 65 NA 202 NA Included Bladder-TCC BLCA US 0 6.64 BOCA-UK::CGP_donor_1397077 1 157979859 158091015 2 4 379 2 0 0 0 2 0.11 0 4 0 0 4 3 4 12 6 6 48.78 11.26 85.42 0 2 0 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 2 146071549 225356996 2 4 379 1 1 0 0 2 0.57 0 3 0 0 NA NA NA 14 6 6 48.78 86.6 10.45 0 3 2 Whitelist BOCA-UK 0.62 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 3 20278133 21619558 2 2 379 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 14 4 8 48.78 52.75 44.1 0 2 1 Whitelist BOCA-UK 0.68 0.04 0 0 0.64 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 4 99462468 170166082 1 3 379 3 0 0 0 0 0.03 0 4 0 0 4 4 4 7 5 5 48.78 9.5 90.39 0 1 2 Whitelist BOCA-UK 0.41 0 0 0 0.33 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 5 759551 44322947 25 90 379 8 6 6 5 65 0.86 0 88 0 0 88 5 8 99 5 10 48.78 24.39 72.94 2 3 1 Whitelist BOCA-UK 18_6 0.94 0 0 0 0.9 1 Low confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc With other complex events 115 0.15 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 6 88458092 155828131 11 24 379 2 2 4 3 13 0.8 0 40 0 0 40 9 13 63 9 10 48.78 48.85 47.95 0 2 1 Whitelist BOCA-UK 20_5 0.87 0 0 0 0.84 1 High confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc With other complex events 35 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 7 589489 154724928 1 11 379 3 2 1 0 5 0.34 0.17 15 0 0 15 4 6 17 4 4 48.78 5.88 93.9 0 2 6 Whitelist BOCA-UK 0.62 0.38 0 0 0.59 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 17 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 8 37886312 42839387 3 8 379 0 2 1 0 5 0.3 0 15 0 0 15 4 5 57 6 6 48.78 89.81 6.77 4 2 14 Whitelist BOCA-UK 20 0.62 0 0 0 0.59 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 11 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 9 16545005 92255036 1 4 379 3 1 0 0 0 0.11 0.08 12 0 0 12 4 7 18 4 7 48.78 81.84 15.06 0 2 3 Whitelist BOCA-UK 0.54 0.23 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 8 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 10 8034971 49715400 1 3 379 2 0 1 0 0 0.3 0 4 0 0 4 4 4 7 5 5 48.78 99.93 0 0 3 4 Whitelist BOCA-UK 0.62 0.02 0 0 0.59 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 11 63435868 63599480 1 1 379 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 48.78 29.66 69.91 0 2 NA Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 2 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 12 11935439 96748674 1 10 379 2 1 0 0 7 0.3 0.33 5 0 0 5 3 3 6 3 4 48.78 24.81 71.45 1 2 1 Whitelist BOCA-UK 18 0.62 0.58 0 0 0.59 1 Linked to low confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc Canonical without polyploidization 13 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 13 31559207 77663175 2 3 379 0 0 1 1 1 0.57 0.01 3 0 0 NA NA NA 5 4 5 48.78 72.15 27.85 0 1 2 Whitelist BOCA-UK 0.62 0.03 0 0 0.64 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 5 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 14 61793556 93747679 1 6 379 3 1 0 0 2 0.11 1 8 0 0 8 5 8 12 5 5 48.78 95.83 0.46 0 3 2 Whitelist BOCA-UK 0.62 1 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 10 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 15 60609595 60759517 2 2 379 0 0 1 1 0 0.57 0.43 3 0 0 NA NA NA 14 6 6 48.78 24.84 70.28 0 2 1 Whitelist BOCA-UK 0.68 0.68 0 0 0.64 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 16 14212374 89534691 1 7 379 4 2 0 0 1 0.06 0.63 8 0 0 8 7 8 9 7 7 48.78 63.23 35.77 0 2 3 Whitelist BOCA-UK 0.54 0.84 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 13 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 17 1111327 12824263 3 3 379 0 1 1 1 0 0.8 0.21 6 0 0 6 4 6 13 5 5 48.78 54.86 39.88 0 3 5 Whitelist BOCA-UK 0.87 0.43 0 0 0.84 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 18 26924845 64011244 6 22 379 3 2 1 0 16 0.34 0 21 0 0 21 4 7 26 5 7 48.78 71.67 28.04 0 5 3 Whitelist BOCA-UK 5 0.68 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc With other complex events 28 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 19 29045942 30097439 2 4 379 0 0 2 0 2 0.11 0 8 0 0 8 0 3 31 3 5 48.78 35.55 55.59 0 12 14 Whitelist BOCA-UK 0.68 0 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 20 14754035 59064331 1 12 379 2 1 0 1 8 0.57 0 13 0 0 13 5 8 16 5 5 48.78 91.63 0.4 0 4 3 Whitelist BOCA-UK 6 0.93 0.01 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc With other complex events 16 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 21 30627381 40515319 9 47 379 2 2 4 1 38 0.55 0 21 0 0 21 4 6 44 4 5 48.78 44.56 32.79 4 2 3 Whitelist BOCA-UK 5_6 0.89 0 0 0 0.64 1 Low confidence BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc With other complex events 56 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 22 36779817 39314084 1 2 379 2 0 0 0 0 0.11 0.64 6 0 0 6 6 6 9 9 9 48.78 99.69 0.31 0 2 3 Whitelist BOCA-UK 0.54 0.85 0 0 0.48 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397077 X 44762294 76980218 1 4 379 2 1 0 0 1 0.3 0 5 0 0 5 3 3 5 3 3 48.78 35.85 64.15 0 1 2 Whitelist BOCA-UK 0.68 0 0 0 0.59 1 No BOCA-UK CGP_donor_1397077 BOCA 0.47 2.53 Bone-Osteosarc NA 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7574018_A_G;17_7577120_A_C,CN:3 2 BOCA-UK DO52605 CGP_donor_1397077 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 1 42469204 79649615 16 32 142 4 4 5 3 16 0.92 0 43 0 0 43 3 6 50 5 8 55.17 78.54 21.45 1 6 4 Whitelist BOCA-UK 13 0.92 0 0 0 0.94 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 48 0.17 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 2 NA NA 0 0 142 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 8 0 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.53 0 NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 3 80457255 128414268 1 3 142 1 1 0 1 0 0.8 0.25 4 0 0 4 4 4 4 4 4 55.17 44.38 52.47 0 2 3 Whitelist BOCA-UK 0.87 0.49 0 0 0.84 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 4 12138006 160356647 1 3 142 2 1 0 0 0 0.3 0.03 8 0.01 0 8 4 6 9 5 7 55.17 92.41 7.49 0 4 2 Whitelist BOCA-UK 0.62 0.1 0.01 0 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 5 18494205 26452913 2 8 142 1 0 1 0 6 0.57 0.01 7 0 0 7 4 5 16 4 4 55.17 25.47 71.87 0 3 4 Whitelist BOCA-UK 0.62 0.04 0 0 0.64 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 10 0.04 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 6 25528181 148592465 2 3 142 0 0 1 1 1 0.57 0.48 6 0 0 6 0 3 11 5 5 55.17 32.63 67.13 0 4 5 Whitelist BOCA-UK 0.87 0.72 0 0 0.64 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 5 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 7 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 8 95509557 130921648 9 29 142 4 3 2 0 20 0.27 0 28 0 0 28 4 5 30 4 7 55.17 99.99 0 0 8 5 Whitelist BOCA-UK 13 0.68 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc With other complex events 38 0.13 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 9 123787382 123823804 1 1 142 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 5 55.17 96.89 0.03 0 2 4 Whitelist BOCA-UK 0.62 0.16 NA NA 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 10 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 11 84218429 84400655 1 1 142 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 4 4 55.17 58.2 37.73 0 2 4 Whitelist BOCA-UK 0.62 0.07 NA NA 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 12 61101854 64624205 1 2 142 0 1 0 0 1 0.39 0.42 2 0 NA NA NA NA NA NA NA 55.17 48.26 51.72 0 2 3 Whitelist BOCA-UK 0.68 0.67 0 NA 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 3 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 13 101502303 104764634 1 8 142 0 1 1 0 6 0.57 0 5 0 0 5 5 5 19 6 9 55.17 30.06 69.09 0 3 4 Whitelist BOCA-UK 0.87 0 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc After polyploidization 10 0.04 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 14 55568427 55611923 1 1 142 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 55.17 99.09 0 0 4 7 Whitelist BOCA-UK 0.62 0.34 NA NA 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 15 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 16 32468669 82206220 5 9 142 0 2 0 3 4 0.14 0 19 0 0 19 7 10 22 7 7 55.17 17.06 82.94 0 2 3 Whitelist BOCA-UK 0.85 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc With other complex events 14 0.05 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 17 NA NA 0 0 142 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 18 21370322 21464090 1 1 142 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 6 6 6 55.17 99.96 0 0 3 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 19 31221517 40921780 5 5 142 2 2 0 1 0 0.53 0.01 10 0 0 10 6 10 15 11 11 55.17 8.28 84.44 0 2 1 Whitelist BOCA-UK 0.68 0.04 0 0 0.64 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 10 0.04 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 20 NA NA 0 0 142 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.63 NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 21 23807618 26978833 2 3 142 1 1 0 0 1 0.57 0.03 4 0 0 4 4 4 6 6 6 55.17 77.35 0 0 3 4 Whitelist BOCA-UK 0.87 0.11 0 0 0.64 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 5 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 22 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397083 X 50932932 53885510 1 2 142 1 1 0 0 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 55.17 32.07 67.93 0 2 NA Whitelist BOCA-UK 0.68 0.17 NA 0 0.64 1 No BOCA-UK CGP_donor_1397083 BOCA 0.57 3.02 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 2 BOCA-UK DO52610 CGP_donor_1397083 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 1 213162214 247806789 21 24 195 6 4 5 6 3 0.91 0 30 0 0 30 13 14 57 13 14 72.13 85.5 11.15 4 1 3 Whitelist BOCA-UK 1 0 0 0 0.94 1 High confidence BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc With other complex events 45 0.12 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 2 99195898 99228398 3 3 195 1 0 1 1 0 0.8 0.03 3 0 0 NA NA NA 13 3 3 72.13 41 58.9 0 2 7 Whitelist BOCA-UK 0.87 0.1 0 0 0.84 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 6 0.02 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 3 116734674 116775785 2 2 195 2 0 0 0 0 0.11 0.26 4 0 0 4 3 4 13 5 7 72.13 99.65 0.21 0 4 2 Whitelist BOCA-UK 0.54 0.5 0 0 0.48 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 4 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 4 43008 88192314 1 2 195 1 0 0 1 0 0.57 0 4 NA 0.04 4 3 4 4 3 4 72.13 97.46 0.04 0 4 2 Whitelist BOCA-UK 0.68 0 NA 0.04 0.64 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 4 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 5 28447481 165464954 1 2 195 2 0 0 0 0 0.11 0 4 NA 0 4 3 4 4 3 3 72.13 25.7 71.6 1 2 0 Whitelist BOCA-UK 0.54 0 NA 0 0.48 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 4 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 6 65181258 126540027 1 7 195 3 3 0 1 0 0.28 0.36 6 0 0 6 6 6 6 6 6 72.13 73.64 26.21 0 2 4 Whitelist BOCA-UK 0.62 0.62 0 0 0.59 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 14 0.04 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 7 70172163 147412446 1 4 195 3 0 0 1 0 0.11 0.04 8 0 0 8 4 8 9 5 9 72.13 99.64 0.13 0 4 3 Whitelist BOCA-UK 0.54 0.13 0 0 0.48 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 8 0.02 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 8 155450 145113709 83 83 195 21 16 24 22 0 0.64 0 90 0 0 90 8 20 90 8 20 72.13 91.93 7.97 15 4 2 Whitelist BOCA-UK 0.76 0 0 0 0.72 1 High confidence BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc With other complex events 166 0.43 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 9 114288507 114736579 1 1 195 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 3 3 72.13 96.58 0.32 0 2 3 Whitelist BOCA-UK 0.62 0.04 NA NA 0.59 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 2 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 10 112874303 113929229 5 5 195 0 1 2 2 0 0.53 0.87 4 0 0 4 0 3 11 6 10 72.13 46.26 50.17 0 3 1 Whitelist BOCA-UK 0.68 1 0 0 0.64 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 10 0.03 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 11 721822 60840739 1 3 195 0 2 1 0 0 0.3 0.04 6 0 0 6 4 5 8 4 5 72.13 46.68 50.08 1 4 6 Whitelist BOCA-UK 0.62 0.14 0 0 0.59 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 6 0.02 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 12 259504 51501239 1 4 195 0 3 1 0 0 0.11 0.09 12 0.01 0 12 4 6 12 4 4 72.13 99.98 0 0 6 7 Whitelist BOCA-UK 0.54 0.25 0.01 0 0.48 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 8 0.02 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 13 48856509 96338057 1 2 195 2 0 0 0 0 0.11 0.07 5 NA 0 5 4 5 6 4 4 72.13 37.18 62.82 0 2 4 Whitelist BOCA-UK 0.54 0.21 NA 0 0.48 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 4 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 14 32689059 37795660 2 2 195 1 1 0 0 0 0.57 0.84 5 0 0 5 4 5 11 6 11 72.13 96.29 0 0 4 5 Whitelist BOCA-UK 0.68 0.97 0 0 0.64 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 4 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 15 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 16 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 17 64321034 64716928 1 1 195 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 4 72.13 94.18 0.49 0 2 4 Whitelist BOCA-UK 0.62 0.21 NA NA 0.59 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 2 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 18 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 19 11730118 11819230 1 1 195 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 6 3 5 72.13 5.62 87.11 0 2 4 Whitelist BOCA-UK 0.62 0.42 NA NA 0.59 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 2 0.01 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 20 NA NA 0 0 195 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.33 NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 21 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 22 NA NA 0 0 195 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.55 NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1397084 X NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1397084 BOCA 0.7 3.46 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7578365_-_GCTCACCATC,CN:3 3 BOCA-UK DO52611 CGP_donor_1397084 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 1 149900456 232658583 28 29 445 8 6 8 6 1 0.9 0 36 0 0 36 6 11 58 9 12 45.1 98.41 1.4 0 3 5 Whitelist BOCA-UK 0.88 0 0 0 0.93 1 Low confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc With other complex events 57 0.06 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 2 198865032 200763259 5 5 445 0 5 0 0 0 0 0.27 11 0 0 11 6 8 59 8 12 45.1 39.53 60.33 0 3 1 Whitelist BOCA-UK 0.1 0.51 0 0 0.07 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 10 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 3 137693454 187956215 11 12 445 2 6 1 2 1 0.15 0.05 30 0 0 30 11 22 57 11 11 45.1 18.99 77.72 0 3 4 Whitelist BOCA-UK 0.62 0.16 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc With other complex events 23 0.03 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 4 164611742 164652367 3 3 445 1 0 1 1 0 0.8 0.15 3 0 0 NA NA NA 26 6 6 45.1 21.91 75.51 0 2 1 Whitelist BOCA-UK 0.87 0.36 0 0 0.84 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 6 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 5 56658464 125104666 2 8 445 1 2 2 1 2 0.88 0.08 21 0 0 21 6 21 46 9 12 45.1 33.9 63.43 0 2 3 Whitelist BOCA-UK 0.87 0.22 0 0 0.91 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 14 0.02 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 6 43972569 46006603 6 6 445 1 2 2 1 0 0.88 0.01 10 0 0 10 3 3 57 6 6 45.1 72.89 26.88 0 4 2 Whitelist BOCA-UK 0.93 0.03 0 0 0.91 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 12 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 7 11963806 147209321 2 9 445 6 0 0 0 3 0 0.67 36 0 0 36 10 36 41 10 10 45.1 31.88 65.44 1 2 3 Whitelist BOCA-UK 0.48 0.88 0 0 0.03 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 15 0.02 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 8 30611038 130974077 1 6 445 3 2 0 0 1 0.14 0 9 0 0 9 5 9 10 5 5 45.1 0.86 99.14 0 2 1 Whitelist BOCA-UK 1 0.62 0 0 0 0.59 1 Linked to low confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc With other complex events 11 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 9 3641509 137589235 1 18 445 3 9 0 1 5 0 0.63 28 0 0 28 8 10 30 8 12 45.1 39.31 60.36 0 2 3 Whitelist BOCA-UK 0.18 0.84 0 0 0.07 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 31 0.03 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 10 757620 15159495 14 14 445 4 3 4 3 0 0.96 0 11 0 0 11 9 11 57 12 12 45.1 40.52 55.68 12 2 1 Whitelist BOCA-UK 0.98 0 0 0 0.98 1 High confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc Canonical without polyploidization 28 0.03 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 11 83832866 84284946 2 2 445 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 27 7 7 45.1 37.96 61.49 0 1 0 Whitelist BOCA-UK 0.54 0.06 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 12 132537085 133083513 2 6 445 0 1 1 0 4 0.57 0.58 3 0 0 NA NA NA 25 7 10 45.1 87.05 8.63 0 4 499 Whitelist BOCA-UK 1 0.68 0.8 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc With other complex events 8 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 13 36406584 48313586 1 4 445 3 1 0 0 0 0.11 0 8 0 0 8 4 8 9 5 5 45.1 0.58 99.42 0 2 1 Whitelist BOCA-UK 0.54 0.02 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 8 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 14 48802183 106839331 7 8 445 1 3 1 2 1 0.67 0.01 19 0 0 19 15 19 35 15 15 45.1 96.26 0.47 0 4 3 Whitelist BOCA-UK 0.62 0.03 0 0 0.74 1 High confidence BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc After polyploidization 15 0.02 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 15 76777773 77054570 2 2 445 0 1 0 1 0 0.57 0.66 2 0 0 NA NA NA 13 3 5 45.1 1.59 98.31 0 1 2 Whitelist BOCA-UK 0.68 0.87 0 0 0.64 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 16 72849219 73207235 3 3 445 3 0 0 0 0 0.03 0.01 5 0 0 5 3 5 27 7 7 45.1 62.12 37.79 0 4 1 Whitelist BOCA-UK 0.41 0.05 0 0 0.33 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 6 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 17 7575466 66470841 1 11 445 3 4 0 0 4 0.06 0.38 15 0 0 15 5 10 17 5 5 45.1 86.78 8.7 0 3 4 Whitelist BOCA-UK 2 0.62 0.63 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 18 0.02 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 18 77530836 77589207 2 2 445 0 0 1 1 0 0.57 0.02 4 0 0 4 0 4 10 3 5 45.1 19.61 75.09 0 0 1 Whitelist BOCA-UK 0.68 0.07 0 0 0.64 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 19 27801422 31946298 4 6 445 0 3 0 1 2 0.11 0.08 11 0 0 11 5 6 17 5 6 45.1 38.35 54.37 0 2 4 Whitelist BOCA-UK 0.62 0.24 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 10 0.01 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 20 15905945 62650594 1 9 445 0 4 1 0 4 0.04 1 14 0 0 14 4 7 15 4 7 45.1 58.37 34.87 9 4 3 Whitelist BOCA-UK 19_2 0.68 1 0 0 0.36 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 14 0.02 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 21 35076401 35164347 1 1 445 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA 4 4 4 45.1 75.83 0 0 3 NA Whitelist BOCA-UK 0.62 0.41 NA NA 0.59 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 2 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 22 37927447 38750681 2 2 445 0 2 0 0 0 0.11 0.26 4 0 0 4 0 3 10 4 4 45.1 98.48 0 0 4 5 Whitelist BOCA-UK 0.54 0.51 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437403 X 3994623 46063808 2 2 445 0 2 0 0 0 0.11 0 6 0 0 6 0 4 14 3 6 45.1 53.85 45.92 4 4 5 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1437403 BOCA 0.8 2.57 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52613 CGP_donor_1437403 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 1 NA NA 0 0 597 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 0 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 2 41203222 217343688 1 8 597 3 0 0 1 4 0.11 0 15 0 0 15 5 6 16 5 5 81.21 94.6 2.53 0 3 2 Whitelist BOCA-UK 6 0.62 0 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 12 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 3 5273444 86230794 25 68 597 9 9 3 4 43 0.18 0 55 0 0 55 19 25 82 21 27 81.21 64.37 32.51 0 3 2 Whitelist BOCA-UK 6 0.93 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 93 0.08 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 4 121261720 181140074 36 49 597 9 11 7 9 13 0.83 0 57 0 0 57 36 50 61 36 38 81.21 99.77 0 3 5 4 Whitelist BOCA-UK 6 0.75 0 0 0 0.87 1 High confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc After polyploidization 85 0.07 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 5 18472606 43606863 19 59 597 3 9 3 4 40 0.16 0 33 0 0 33 14 16 74 14 19 81.21 73.34 26.52 2 3 4 Whitelist BOCA-UK 16_6 0.54 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 78 0.07 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 6 40585455 137670952 40 146 597 8 20 5 7 106 0 0 131 0 0 131 17 19 152 17 19 81.21 74.61 22.57 8 3 4 Whitelist BOCA-UK 16_19_2_3_5 0.54 0 0 0 0.11 1 Linked to high confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 186 0.16 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 7 41934672 150254223 1 5 597 1 1 0 1 2 0.8 0 4 0 0 4 3 4 4 3 3 81.21 97.01 0.42 1 3 2 Whitelist BOCA-UK 0.93 0 0 0 0.84 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 8 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 8 78083409 78306873 5 5 597 1 2 1 1 0 0.9 0.01 6 0 0 6 4 6 21 6 12 81.21 70.67 25.82 0 6 4 Whitelist BOCA-UK 0.93 0.03 0 0 0.92 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 10 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 9 22136763 37510561 2 2 597 1 0 1 0 0 0.57 0 5 0 0 5 3 3 7 4 5 81.21 71.89 25 0 2 1 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 4 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 10 38041777 55226131 2 2 597 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 9 3 3 81.21 96.65 0 0 3 5 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 4 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 11 84080068 84423038 2 2 597 2 0 0 0 0 0.11 0 4 0 0 4 0 3 12 6 6 81.21 96.06 0.2 0 0 1 Whitelist BOCA-UK 0.54 0.01 0 0 0.48 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 4 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 12 54388545 79574150 58 85 597 16 12 16 14 27 0.86 0 127 0 0 127 3 4 130 3 4 81.21 96.26 0 0 16 22 Whitelist BOCA-UK 2_20_6 0.93 0 0 0 0.9 1 High confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 143 0.12 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 13 47552458 108288547 1 2 597 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 6 6 6 81.21 59.92 40.08 2 2 3 Whitelist BOCA-UK 0.54 0 NA 0 0.48 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 4 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 14 NA NA 0 0 597 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 0 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 15 78946664 78957802 1 1 597 0 1 0 0 0 0.39 0.01 2 0 0 NA NA NA NA NA NA 81.21 99.92 0 0 4 5 Whitelist BOCA-UK 0.62 0.03 0 0 0.59 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 2 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 16 956773 33610120 3 4 597 1 1 1 0 1 0.8 0.44 5 0 0 5 5 5 17 10 15 81.21 56.24 43.67 0 2 4 Whitelist BOCA-UK 0.68 0.69 0 0 0.84 1 Linked to high confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc Before polyploidization 7 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 17 67678508 67690572 1 1 597 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 4 4 4 81.21 68.49 27.06 0 4 NA Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 2 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 18 50361923 53374748 2 2 597 1 0 1 0 0 0.57 0.13 3 0 0 NA NA NA 22 9 9 81.21 93.46 0.27 0 3 2 Whitelist BOCA-UK 0.68 0.32 0 0 0.64 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 4 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 19 29326898 57862516 10 24 597 3 4 0 3 14 0.31 0 19 0 0 19 14 14 20 14 14 81.21 70.49 22.24 3 2 3 Whitelist BOCA-UK 6 0.97 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc Canonical without polyploidization 34 0.03 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 20 35368877 35493654 5 5 597 1 2 1 1 0 0.9 0 9 0 0 9 5 9 70 7 10 81.21 92.59 0 0 14 15 Whitelist BOCA-UK 0.93 0 0 0 0.92 1 Linked to high confidence BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc With other complex events 10 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 21 NA NA 0 0 597 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 0 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 22 19426116 28979145 1 2 597 0 0 0 1 1 0.39 0.06 2 NA NA NA NA NA 5 4 5 81.21 83.85 5.04 0 2 4 Whitelist BOCA-UK 0.68 0.18 NA NA 0.59 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 3 0 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437404 X 46613622 46929132 4 4 597 0 0 2 2 0 0.26 0 6 0 0 6 3 6 41 12 15 81.21 84.06 12.64 0 2 3 Whitelist BOCA-UK 0.62 0.03 0 0 0.59 1 No BOCA-UK CGP_donor_1437404 BOCA 0.78 3.61 Bone-Osteosarc NA 8 0.01 NA 30 BOCA-UK DO52615 CGP_donor_1437404 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 1 51638845 205666711 2 3 73 0 1 1 0 1 0.57 0.51 6 0 0 6 6 6 6 6 6 74.31 62.38 34.31 0 2 3 Whitelist BOCA-UK 0.62 0.76 0 0 0.64 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 5 0.03 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 2 209775262 209788229 1 1 73 0 0 0 1 0 0.39 0.29 1 NA NA NA NA NA 4 4 4 74.31 37.49 59.82 0 2 NA Whitelist BOCA-UK 0.62 0.53 NA NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 3 60142686 174861545 1 5 73 3 1 0 1 0 0.28 0.04 10 0 0 10 5 10 11 5 6 74.31 74.54 22.39 0 2 3 Whitelist BOCA-UK 0.62 0.13 0 0 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 10 0.07 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 4 NA NA 0 0 73 0 0 0 0 0 NA 0.64 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.85 0 NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 5 NA NA 0 0 73 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.84 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 6 NA NA 0 0 73 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.32 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 7 94806564 94818587 1 1 73 0 0 1 0 0 0.39 0.8 1 0 NA NA NA NA 4 3 4 74.31 92.67 7.11 0 3 NA Whitelist BOCA-UK 0.62 0.95 0 NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 8 111068738 132767591 5 5 73 2 3 0 0 0 0.14 0.01 13 0 0 13 11 12 14 11 12 74.31 88.39 11.6 0 2 4 Whitelist BOCA-UK 0.62 0.05 0 0 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 10 0.07 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 9 98829459 125517056 4 4 73 1 1 1 1 0 1 0 7 0 0 7 7 7 18 9 9 74.31 54.63 42.26 0 3 4 Whitelist BOCA-UK 1 0 0 0 1 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 8 0.05 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 10 22350239 65007137 1 2 73 1 0 0 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 74.31 99.81 0 0 3 NA Whitelist BOCA-UK 0.68 1 0 0 0.64 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 4 0.03 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 11 NA NA 0 0 73 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.51 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 12 NA NA 0 0 73 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.51 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 13 NA NA 0 0 73 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 14 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 15 56431898 56442972 1 1 73 0 0 1 0 0 0.39 0.05 1 0 NA NA NA NA 7 0 3 74.31 49.34 45.88 0 2 NA Whitelist BOCA-UK 0.62 0.17 0 NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 16 17392180 17440732 1 1 73 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 5 74.31 99.91 0 0 3 4 Whitelist BOCA-UK 0.62 0.9 NA NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 17 52632961 62189868 1 1 73 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 74.31 88.21 11.77 0 2 4 Whitelist BOCA-UK 0.62 0.9 NA NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 18 9812521 9867368 1 1 73 0 0 0 1 0 0.39 0.45 2 NA NA NA NA NA 4 3 4 74.31 95.28 0.07 0 2 4 Whitelist BOCA-UK 0.62 0.69 NA NA 0.59 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 19 NA NA 0 0 73 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.86 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 20 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 21 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 22 NA NA 0 0 73 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.18 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437405 X NA NA 0 0 73 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.52 NA NA NA 0 No BOCA-UK CGP_donor_1437405 BOCA 0.38 2.91 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52616 CGP_donor_1437405 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 1 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 2 182527399 182586305 1 1 871 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 94.44 99.89 0.02 0 2 4 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 2 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 3 8793061 39393867 7 23 871 3 1 1 2 16 0.67 0 11 0 0 11 11 11 13 13 13 94.44 99.95 0 0 4 14 Whitelist BOCA-UK 5 0.41 0 0 0 0.74 1 High confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc After polyploidization 30 0.02 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 4 NA NA 0 0 871 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 5 55072 32110730 55 130 871 12 17 16 10 75 0.5 0 99 0 0 99 6 6 136 6 6 94.44 93.71 3.6 8 5 2 Whitelist BOCA-UK 3 1 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc With other complex events 185 0.11 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 6 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 7 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 8 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 9 NA NA 0 0 871 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 10 67199517 67250161 2 2 871 0 0 1 1 0 0.57 0 4 NA 0 4 4 4 5 5 5 94.44 99.81 0.01 0 2 3 Whitelist BOCA-UK 0.68 0 NA 0 0.64 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 4 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 11 56260176 69717430 5 6 871 1 3 0 1 1 0.28 0.11 9 0 0 9 4 5 34 8 11 94.44 74.42 25.16 4 3 4 Whitelist BOCA-UK 0.68 0.28 0 0 0.59 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 11 0.01 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 12 4757456 129380238 340 560 871 90 99 72 79 220 0.17 0 551 0 0 551 4 5 552 4 4 94.44 99.93 0.02 26 3 49 Whitelist BOCA-UK 5 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc With other complex events 900 0.52 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 13 NA NA 0 0 871 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 14 90181353 102291505 3 12 871 1 2 0 0 9 0.3 0.14 13 0 0 13 3 4 33 4 5 94.44 99.9 0 0 6 4 Whitelist BOCA-UK 5 0.83 0.34 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc With other complex events 15 0.01 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 15 NA NA 0 0 871 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 16 52040498 88719044 21 108 871 5 5 4 7 87 0.82 0 91 0 0 91 3 4 92 3 4 94.44 98.89 0 6 4 8 Whitelist BOCA-UK 5 0.62 0 0 0 0.87 1 Linked to high confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc With other complex events 129 0.07 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 17 15048208 63271544 1 3 871 1 1 0 0 1 0.57 0.09 4 0 0 4 3 4 25 3 3 94.44 96.35 3.63 0 4 2 Whitelist BOCA-UK 0.62 0.25 0 0 0.64 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 5 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 18 13015135 22805711 1 2 871 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 6 4 6 94.44 95.35 0 5 3 4 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 4 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 19 NA NA 0 0 871 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 20 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 21 10753819 45129141 1 21 871 2 0 1 2 16 0.53 0 19 0 0 19 5 6 19 5 6 94.44 77.33 0.02 1 5 3 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 26 0.01 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 22 NA NA 0 0 871 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.01 NA NA NA 1 No BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc NA 0 0 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437406 X 13871047 56933399 16 150 871 7 3 1 5 134 0.17 0 113 0 0 113 3 5 121 3 4 94.44 99.63 0.14 17 4 10 Whitelist BOCA-UK 5 0.62 0 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1437406 BOCA 0.52 4.48 Bone-Osteosarc With other complex events 166 0.1 NA 0 BOCA-UK DO52617 CGP_donor_1437406 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 1 NA NA 0 0 92 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.05 NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 2 169181509 169198083 1 1 92 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 42.13 0.01 99.9 0 1 2 Whitelist BOCA-UK 0.62 0.03 NA NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 3 116502408 116838348 1 1 92 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA NA NA NA 42.13 99.83 0 0 0 1 Whitelist BOCA-UK 0.62 0.45 0 NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 4 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 5 180056058 180477095 3 3 92 1 0 1 1 0 0.8 1 3 0 0 NA NA NA 7 4 4 42.13 11.9 87.97 0 3 2 Whitelist BOCA-UK 0.87 1 0 0 0.84 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 6 0.03 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 6 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 7 11607682 11947943 2 2 92 0 0 1 1 0 0.57 0.82 4 0 0 4 4 4 7 7 7 42.13 0.09 99.68 0 1 2 Whitelist BOCA-UK 0.68 0.96 0 0 0.64 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 4 0.02 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 8 35680891 35860134 1 1 92 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 42.13 99.87 0.12 0 2 3 Whitelist BOCA-UK 0.62 0.59 NA NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 9 21837534 121587127 1 2 92 2 0 0 0 0 0.11 0.59 8 NA 0 8 5 8 9 5 9 42.13 54.31 42.58 0 2 3 Whitelist BOCA-UK 0.54 0.81 NA 0 0.48 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 4 0.02 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 10 84261257 84386202 1 1 92 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 42.13 99.83 0 0 0 1 Whitelist BOCA-UK 0.62 0.69 NA NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 11 86917622 100968022 7 7 92 3 2 1 1 0 0.67 0.21 14 0 0 14 14 14 16 16 16 42.13 40.22 55.72 0 1 2 Whitelist BOCA-UK 0.77 0.43 0 0 0.74 1 High confidence BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc Canonical without polyploidization 14 0.08 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 12 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 13 NA NA 0 0 92 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.63 NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 14 64205148 64385363 1 1 92 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 42.13 39.28 59.81 0 3 NA Whitelist BOCA-UK 0.62 0.63 NA NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 15 39173576 39454262 2 2 92 0 0 1 1 0 0.57 0.74 4 0 0 4 4 4 7 7 7 42.13 0.27 99.6 0 1 2 Whitelist BOCA-UK 0.68 0.91 0 0 0.64 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 4 0.02 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 16 NA NA 0 0 92 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.57 NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 17 15595938 21741775 1 1 92 1 0 0 0 0 0.39 0.04 2 0.02 NA NA NA NA 5 3 3 42.13 1.1 94.42 0 2 3 Whitelist BOCA-UK 0.62 0.14 0.02 NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 18 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 19 47672696 47696909 1 1 92 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 42.13 50.74 49.09 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 20 50980028 62689311 45 51 92 13 8 12 12 6 0.73 0 46 0 0 46 13 29 47 13 13 42.13 53.08 40.35 0 2 1 Whitelist BOCA-UK 0.9 0 0 0 0.8 1 High confidence BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc With other complex events 96 0.52 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 21 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 22 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437407 X 134319683 134344066 1 2 92 0 0 1 1 0 0.57 0.33 1 NA 0 NA NA NA NA NA NA 42.13 100 0 0 1 NA Whitelist BOCA-UK 0.68 0.59 NA 0 0.64 1 No BOCA-UK CGP_donor_1437407 BOCA 0.83 1.77 Bone-Osteosarc NA 4 0.02 NA 2 BOCA-UK DO52618 CGP_donor_1437407 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 3 47130248 47239390 1 1 6 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 25.24 37.4 62.46 0 1 NA Whitelist BOCA-UK 0.62 0.19 NA NA 0.59 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 2 0.17 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 6 NA NA 0 0 6 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.15 NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 11 16170706 16250815 1 1 6 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 25.24 0.06 99.51 0 2 3 Whitelist BOCA-UK 0.62 0.49 NA NA 0.59 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 2 0.17 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 19 57131179 57154954 1 1 6 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 25.24 0 99.83 0 2 NA Whitelist BOCA-UK 0.62 0.29 NA NA 0.59 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 2 0.17 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437408 X NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 NA NA NA 0 No BOCA-UK CGP_donor_1437408 BOCA 0.87 1.83 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52619 CGP_donor_1437408 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 1 82232387 82319780 1 1 118 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA 5 4 4 67.32 67.6 32.4 0 4 6 Whitelist BOCA-UK 0.62 0.1 0 NA 0.59 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 2 189048530 203590444 15 16 118 3 1 6 5 1 0.27 0.01 13 0 0 13 13 13 17 14 14 67.32 67.95 31.94 0 2 4 Whitelist BOCA-UK 0.62 0.05 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc Before polyploidization 31 0.13 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 3 116131760 154701326 1 2 118 1 0 0 1 0 0.57 0.07 5 0 0 5 3 5 8 5 5 67.32 25.16 71.78 0 2 4 Whitelist BOCA-UK 0.68 0.2 0 0 0.64 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 4 0.02 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 4 94008930 94055771 1 1 118 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 4 67.32 99.75 0.02 0 2 4 Whitelist BOCA-UK 0.62 0.1 NA NA 0.59 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 5 41503005 44409555 2 2 118 1 0 1 0 0 0.57 0.12 5 0 0 5 3 3 9 3 3 67.32 23.15 76.72 0 3 4 Whitelist BOCA-UK 0.68 0.31 0 0 0.64 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 4 0.02 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 6 18744089 18783089 1 1 118 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA 4 3 3 67.32 37.49 62.24 0 4 5 Whitelist BOCA-UK 0.62 0.38 NA NA 0.59 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 7 7402721 30170308 2 2 118 0 0 0 2 0 0.11 0.1 1 NA 0 NA NA NA NA NA NA 67.32 99.73 0.05 0 4 NA Whitelist BOCA-UK 0.54 0.26 NA 0 0.48 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 4 0.02 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 8 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 9 NA NA 0 0 118 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.96 0 NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 10 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 11 79173759 84202448 1 3 118 3 0 0 0 0 0.03 1 6 0 0 6 4 6 9 5 7 67.32 99.16 0.28 0 3 1 Whitelist BOCA-UK 0.41 1 0 0 0.33 1 Linked to high confidence BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc Canonical without polyploidization 6 0.03 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 12 22931670 39481564 14 17 118 3 2 4 5 3 0.7 0 34 0 0 34 14 17 36 14 17 67.32 78.41 17.58 0 4 5 Whitelist BOCA-UK 0.93 0 0 0 0.78 1 High confidence BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc With other complex events 31 0.13 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 13 NA NA 0 0 118 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.42 NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 14 87445194 87491540 1 1 118 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 67.32 99.05 0.04 0 3 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 2 0.01 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 15 54373458 54812369 4 6 118 2 1 1 0 2 0.57 0 4 0 0 4 3 4 10 5 5 67.32 45.15 54.68 1 2 4 Whitelist BOCA-UK 0.62 0 0 0 0.64 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 10 0.04 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 16 2570177 12331926 8 11 118 1 4 1 2 3 0.39 0 8 0 0 8 8 8 22 12 13 67.32 49.79 45.69 0 2 4 Whitelist BOCA-UK 11 0.87 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc Before polyploidization 19 0.08 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 17 12496853 19488850 18 20 118 3 2 6 7 2 0.29 0 29 0 0 29 3 4 45 3 3 67.32 72.56 22.99 16 56 8 Whitelist BOCA-UK 0.66 0 0 0 0.59 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 38 0.16 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 18 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 19 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 20 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 21 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 22 25614275 43090002 1 2 118 0 0 1 1 0 0.57 0.05 4 0 0 4 3 4 5 3 3 67.32 72.32 27.68 0 4 2 Whitelist BOCA-UK 0.68 0.17 0 0 0.64 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 4 0.02 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437409 X NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437409 BOCA 0.67 3.41 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52620 CGP_donor_1437409 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 2 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 3 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 6 70986165 164827209 21 30 33 7 6 3 5 9 0.64 0 17 0 0 17 17 17 17 17 17 0.15 2.76 97.09 0 2 1 Whitelist BOCA-UK 0.93 0 0 0 0.72 1 High confidence BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign Canonical without polyploidization 51 0.77 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 7 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 8 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 11 102755543 102864648 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 0.15 0.08 99.49 0 2 3 Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 16 72696285 72904333 1 1 33 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 0.15 0 99.9 0 2 NA Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437410 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437410 BOCA 0.72 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52621 CGP_donor_1437410 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 1 51871319 244912139 12 130 513 3 3 3 3 118 1 0 18 0 0 18 18 18 18 18 18 1.65 4.44 95.56 0 1 2 Whitelist BOCA-UK 2_4 0.87 0 0 0 1 1 High confidence BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign Canonical without polyploidization 142 0.14 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 2 8888556 242818178 13 134 513 2 2 3 6 121 0.35 0 37 0 0 37 37 37 37 37 37 1.65 4.18 95.71 0 2 1 Whitelist BOCA-UK 1_4_5 0.85 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign Canonical without polyploidization 147 0.14 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 3 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 4 3484005 186431924 30 195 513 8 9 6 7 165 0.88 0 37 0 0 37 37 37 37 37 37 1.65 2.69 97.29 0 2 1 Whitelist BOCA-UK 1_2 0.89 0 0 0 0.91 1 High confidence BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign Canonical without polyploidization 225 0.22 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 5 67575508 163331317 3 93 513 0 1 2 0 90 0.3 0 20 0 0 20 11 11 22 11 11 1.65 5.67 94.21 0 2 1 Whitelist BOCA-UK 1_2_4 0.83 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign With other complex events 96 0.09 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 6 1694508 170873562 65 284 513 16 15 16 18 219 0.96 0 57 0 0 57 57 57 60 60 60 1.65 8.91 90.93 0 2 1 Whitelist BOCA-UK 1_2_4 0.98 0 0 0 0.98 1 High confidence BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign Canonical without polyploidization 349 0.34 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 7 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 8 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 9 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 10 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 11 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 12 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 13 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 14 NA NA 0 0 513 0 0 0 0 0 NA 0.7 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 0 NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 15 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 16 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 17 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 18 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 19 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 20 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 21 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 22 NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437411 X NA NA 0 0 513 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1437411 BOCA 0.75 1.98 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52622 CGP_donor_1437411 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 1 157348486 157457699 1 1 36 0 0 1 0 0 0.39 0.53 1 0 NA NA NA NA 5 3 3 0 0 99.99 0 2 NA Whitelist BOCA-UK 0.62 0.76 0 NA 0.59 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 2 84572552 84583744 1 1 36 0 0 0 1 0 0.39 1 1 0 NA NA NA NA NA NA NA 0 0 99.9 0 2 NA Whitelist BOCA-UK 0.62 1 0 NA 0.59 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 3 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 4 142526478 142537027 1 1 36 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 0 0 99.81 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 5 NA NA 0 0 36 0 0 0 0 0 NA 0.49 NA 0.1 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.74 0.1 NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 6 NA NA 0 0 36 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 7 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 8 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 10 NA NA 0 0 36 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.88 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 11 NA NA 0 0 36 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 7 3 7 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.1 0 NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 12 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 13 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 14 NA NA 0 0 36 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.03 0 NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 17 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 19 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.75 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 20 NA NA 0 0 36 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.77 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 22 NA NA 0 0 36 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.6 NA NA NA 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437412 X 108044526 108067755 1 1 36 0 0 0 1 0 0.39 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK 0.62 0.9 NA NA 0.59 0 No BOCA-UK CGP_donor_1437412 BOCA 0.42 2 Bone-Benign NA 2 0.03 NA 2 BOCA-UK DO52623 CGP_donor_1437412 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 2 NA NA 0 0 7 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.29 NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 4 NA NA 0 0 7 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.22 NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.55 NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 13 NA NA 0 0 7 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.45 NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 17 NA NA 0 0 7 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.39 NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437414 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437414 BOCA 0.47 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52626 CGP_donor_1437414 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 1 NA NA 0 0 34 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.41 0 NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 2 NA NA 0 0 34 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 3 NA NA 0 0 34 0 0 0 0 0 NA 0.3 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.54 0 NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 4 NA NA 0 0 34 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 8 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 9 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 10 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 17 NA NA 0 0 34 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.82 NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437415 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437415 BOCA 0.23 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52627 CGP_donor_1437415 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 2 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.24 NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 14 NA NA 0 0 1 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437416 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437416 BOCA 0.58 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52629 CGP_donor_1437416 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 2 199519390 241270436 9 9 10 1 6 0 2 0 0.03 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.91 0 2 NA Whitelist BOCA-UK 0.41 0 0 0 0.33 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 18 0.9 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 8 NA NA 0 0 10 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.65 NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 15 NA NA 0 0 10 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437417 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437417 BOCA 0.28 1.95 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52630 CGP_donor_1437417 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.37 NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 20 23686630 23749370 1 1 2 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 5.34 0 99 0 2 NA Whitelist BOCA-UK 0.62 0.15 NA NA 0.59 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 2 0.5 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437418 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437418 BOCA 0.28 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52631 CGP_donor_1437418 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 1 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 3 95363924 190779482 1 2 27 0 0 1 1 0 0.57 0.43 1 0 0 NA NA NA NA NA NA 5.3 0 99.88 0 2 NA Whitelist BOCA-UK 0.68 0.68 0 0 0.64 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 4 0.07 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 4 164094908 164114810 1 1 27 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.3 0 99.76 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 5 43922360 43938951 1 1 27 0 0 0 1 0 0.39 0.24 1 0 NA NA NA NA NA NA NA 5.3 0 99.86 0 2 NA Whitelist BOCA-UK 0.62 0.48 0 NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 6 154327688 154345266 1 1 27 0 0 1 0 0 0.39 0.22 1 0 NA NA NA NA NA NA NA 5.3 0.12 99.74 0 2 NA Whitelist BOCA-UK 0.62 0.45 0 NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 8 NA NA 0 0 27 0 0 0 0 0 NA 0.16 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.36 0.01 NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 9 22222715 22233061 1 1 27 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.3 1.59 98.29 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 11 61929465 61947862 1 1 27 0 0 1 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 5.3 0 99.47 0 2 NA Whitelist BOCA-UK 0.62 0.61 NA NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 12 89075327 89089118 1 1 27 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.3 0 99.92 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 13 NA NA 0 0 27 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.83 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 14 28738529 28991338 1 2 27 0 0 2 0 0 0.11 0.21 1 NA 0 NA NA NA NA NA NA 5.3 0 84.08 0 2 NA Whitelist BOCA-UK 0.54 0.43 NA 0 0.48 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 4 0.07 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 15 NA NA 0 0 27 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 16 NA NA 0 0 27 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 17 22192953 22204475 1 1 27 0 0 0 1 0 0.39 0.52 1 NA NA NA NA NA 4 4 4 5.3 3.96 96.03 0 2 NA Whitelist BOCA-UK 0.62 0.76 NA NA 0.59 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 2 0.04 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 19 NA NA 0 0 27 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.26 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437419 X NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437419 BOCA 0.21 1.94 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52632 CGP_donor_1437419 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 8 29506229 32953934 1 1 1 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 10.6 19.65 80.22 0 2 NA Whitelist BOCA-UK 0.62 0.17 NA NA 0.59 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 2 1 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437420 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437420 BOCA 0.28 1.89 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52633 CGP_donor_1437420 male C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 1 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 2 NA NA 0 0 145 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 3 99097210 115323895 20 62 145 7 5 5 3 42 0.66 0 19 0 0 19 5 8 35 5 9 9.55 79.77 17.04 4 6 7 Whitelist BOCA-UK 6 0.71 0 0 0 0.74 0 Low confidence BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign With other complex events 82 0.28 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 4 87435268 87525762 1 1 145 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 9.55 0 99.82 0 2 NA Whitelist BOCA-UK 0.62 0.01 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 5 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 6 41870611 56460501 20 70 145 8 3 5 4 50 0.42 0 40 0 0 40 5 6 50 5 5 9.55 52.6 44.56 7 15 3 Whitelist BOCA-UK 0.86 0 0 0 0.63 0 Low confidence BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign With other complex events 90 0.31 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 7 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 8 100144293 100173672 1 1 145 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 9.55 0 99.99 0 2 NA Whitelist BOCA-UK 0.62 0.04 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 9 123835691 124480138 1 1 145 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 9.55 0.46 98.87 0 1 2 Whitelist BOCA-UK 0.62 0.16 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 10 56185351 77313385 1 2 145 1 1 0 0 0 0.57 0.07 2 NA 0 NA NA NA NA NA NA 9.55 0.14 99.74 0 1 2 Whitelist BOCA-UK 0.68 0.21 NA 0 0.64 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 4 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 11 84024730 84304048 1 1 145 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 9.55 0.21 99.37 0 1 2 Whitelist BOCA-UK 0.62 0.07 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 12 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 13 50617693 50675856 1 1 145 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 9.55 0 85.85 0 2 NA Whitelist BOCA-UK 0.62 0.2 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 14 NA NA 0 0 145 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.26 NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 15 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 16 NA NA 0 0 145 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.41 NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 17 7946480 16670767 2 18 145 1 1 2 0 14 0.57 0 13 0 0 13 3 3 15 3 3 9.55 27.34 68.22 0 8 7 Whitelist BOCA-UK 6 0.87 0 0 0 0.64 0 Linked to low confidence BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign With other complex events 22 0.08 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 18 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 19 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 20 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 21 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 22 NA NA 0 0 145 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1437423 X 64143143 64172398 1 1 145 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 9.55 0 99.78 0 2 NA Whitelist BOCA-UK 0.62 0.05 NA NA 0.59 0 No BOCA-UK CGP_donor_1437423 BOCA 0.33 2.04 Bone-Benign NA 2 0.01 NA 2 BOCA-UK DO52636 CGP_donor_1437423 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 1 113836373 114303665 3 5 217 0 3 0 0 2 0.03 0 5 0 0 5 5 5 34 8 9 63 84.19 12.79 0 3 4 Whitelist BOCA-UK 0.62 0 0 0 0.33 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 8 0.02 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 2 76968085 78666854 2 2 217 0 0 1 1 0 0.57 0.54 1 0 0 NA NA NA 6 4 6 63 98.86 1.03 0 4 NA Whitelist BOCA-UK 0.68 0.77 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 3 116161840 116714480 4 4 217 4 0 0 0 0 0.01 0.43 7 0 0 7 3 6 15 3 5 63 65.8 31.11 0 1 3 Whitelist BOCA-UK 0.21 0.67 0 0 0.16 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 8 0.02 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 4 1628586 119770886 6 7 217 0 2 2 2 1 0.57 0.59 11 0 0 11 6 8 21 6 7 63 34.69 65.3 0 4 2 Whitelist BOCA-UK 0.68 0.81 0 0 0.64 0 Low confidence BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc With other complex events 13 0.03 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 5 1460724 172452602 1 12 217 1 2 1 1 7 0.9 0.89 7 0 0 7 4 7 8 4 4 63 52.42 47.45 0 2 3 Whitelist BOCA-UK 1 0.93 1 0 0 0.92 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 17 0.04 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 6 655387 105863260 3 5 217 0 0 2 1 2 0.3 0.47 9 0 0 9 3 5 10 4 4 63 57.73 39.17 0 2 3 Whitelist BOCA-UK 0.68 0.72 0 0 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 8 0.02 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 7 43498754 52862136 6 6 217 3 0 1 2 0 0.34 0.88 6 0 0 6 4 4 10 4 4 63 99.78 0 0 4 6 Whitelist BOCA-UK 0.62 1 0 0 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 12 0.03 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 8 130601777 130683840 1 1 217 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 4 4 63 80.28 19.61 0 4 5 Whitelist BOCA-UK 0.62 0.04 NA NA 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 9 NA NA 0 0 217 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.08 NA NA NA 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 10 53875344 69874432 1 4 217 1 1 0 0 2 0.57 0.87 7 0 0 7 5 6 16 5 6 63 57.9 38.71 0 4 5 Whitelist BOCA-UK 1 1 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 6 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 11 70081763 85184704 2 2 217 1 0 1 0 0 0.57 0.63 1 0 0 NA NA NA 7 3 4 63 78.19 21.38 0 4 NA Whitelist BOCA-UK 0.68 0.84 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 12 10748620 131003876 1 14 217 0 2 1 1 10 0.57 0.2 12 0 0 12 3 4 12 3 3 63 65.24 31.09 0 2 8 Whitelist BOCA-UK 0.9 0.42 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 18 0.04 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 13 20019610 26186736 2 3 217 0 0 1 1 1 0.57 0.06 3 0 0 NA NA NA 8 6 7 63 34.07 63.15 0 2 3 Whitelist BOCA-UK 0.87 0.18 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 5 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 14 75402461 75459061 1 1 217 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 63 96.29 0 0 3 NA Whitelist BOCA-UK 0.62 0.07 NA NA 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 15 23168297 23178931 1 1 217 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 9 4 4 63 38.68 56.02 0 2 NA Whitelist BOCA-UK 0.62 0 0 NA 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 16 NA NA 0 0 217 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 NA NA NA 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 17 7577437 22095440 33 51 217 11 5 8 9 18 0.52 0 54 0 0 54 3 5 55 3 5 63 78.29 17.27 1 37 29 Whitelist BOCA-UK 0.68 0 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 84 0.19 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 18 NA NA 0 0 217 0 0 0 0 0 NA 1 NA 0.05 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 0.05 NA NA 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 19 50675165 54717898 5 5 217 2 1 1 1 0 0.9 0.33 1 0 0 NA NA NA NA NA NA 63 99.62 0 0 4 NA Whitelist BOCA-UK 0.93 0.58 0 0 0.92 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 10 0.02 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 20 10755977 12505491 2 2 217 1 0 1 0 0 0.57 0.01 2 0 0 NA NA NA 12 5 11 63 44.47 48.51 0 4 5 Whitelist BOCA-UK 0.68 0.04 0 0 0.64 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 21 33345506 46882573 1 3 217 0 0 0 1 2 0.39 0.34 3 NA 0 NA NA NA 6 5 6 63 68.64 0 0 5 4 Whitelist BOCA-UK 0.87 0.6 NA 0 0.59 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 22 NA NA 0 0 217 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1475256 X NA NA 0 0 217 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.04 NA NA NA 0 No BOCA-UK CGP_donor_1475256 BOCA 0.79 3.21 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52639 CGP_donor_1475256 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 1 5777564 248793247 23 46 216 6 5 6 6 23 0.99 0 52 0 0 52 12 21 53 12 12 63.84 71.91 27.57 4 2 3 Whitelist BOCA-UK 14 0.68 0 0 0 1 1 High confidence BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc With other complex events 69 0.16 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 2 39311961 238619384 1 8 216 2 1 0 0 5 0.3 0.01 6 0 0 6 3 6 6 3 3 63.84 99.91 0 4 5 3 Whitelist BOCA-UK 6_9 0.87 0.04 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc With other complex events 11 0.03 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 3 99645864 99702631 1 1 216 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 6 3 4 63.84 89.88 9.98 0 3 NA Whitelist BOCA-UK 0.62 0.05 0 NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 4 NA NA 0 0 216 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 0 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 5 44283316 58825772 1 2 216 0 0 1 1 0 0.57 0 4 0 0 4 0 4 5 0 4 63.84 37.37 59.97 0 2 1 Whitelist BOCA-UK 0.68 0.02 0 0 0.64 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 4 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 6 64603046 167895820 58 75 216 10 15 15 18 17 0.52 0 130 0 0 130 11 13 132 11 13 63.84 99.76 0 5 5 3 Whitelist BOCA-UK 0.91 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc With other complex events 133 0.31 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 7 104680878 151405910 1 17 216 7 1 0 0 9 0 0.03 11 0 0 11 5 9 14 5 9 63.84 89.39 7.77 0 2 4 Whitelist BOCA-UK 9 0.25 0.12 0 0 0.04 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 25 0.06 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 8 47213129 70941877 1 2 216 0 2 0 0 0 0.11 0 4 NA 0 4 3 4 5 3 3 63.84 68.9 27.57 1 4 3 Whitelist BOCA-UK 0.54 0.01 NA 0 0.48 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 4 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 9 2755212 23671100 5 16 216 1 0 2 2 11 0.53 0 17 0 0 17 6 7 23 6 7 63.84 12.45 87.37 0 2 4 Whitelist BOCA-UK 7 0.68 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 21 0.05 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 10 3820397 88192826 2 3 216 0 0 1 1 1 0.57 0.63 2 0 0 NA NA NA NA NA NA 63.84 99.56 0.35 3 3 4 Whitelist BOCA-UK 0.87 0.84 0 0 0.64 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 5 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 11 133906451 134580201 1 1 216 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 63.84 57.93 38.22 0 2 NA Whitelist BOCA-UK 0.62 0.03 NA NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 12 42635722 50513775 2 2 216 0 1 0 1 0 0.57 1 5 0 0 5 3 5 14 4 4 63.84 18.18 81.74 0 3 2 Whitelist BOCA-UK 0.68 1 0 0 0.64 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 4 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 13 105987735 106083550 1 1 216 1 0 0 0 0 0.39 0.85 2 0 NA NA NA NA 7 5 7 63.84 27.41 72.59 0 2 3 Whitelist BOCA-UK 0.62 0.99 0 NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 14 60585562 102848229 2 22 216 0 0 1 3 18 0.11 0 14 0 0 14 5 9 29 5 9 63.84 73.39 11.62 2 2 4 Whitelist BOCA-UK 0.94 0 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc With other complex events 26 0.06 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 15 56173064 56226567 1 1 216 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 63.84 22.85 77.03 0 2 NA Whitelist BOCA-UK 0.62 0.12 NA NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 16 83721824 83743297 1 1 216 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA 4 0 0 63.84 95.45 0.03 0 3 NA Whitelist BOCA-UK 0.62 0.64 NA NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 17 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 0 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 18 737579 1435809 1 4 216 0 1 0 0 3 0.39 0 3 0.01 0 NA NA NA 16 6 6 63.84 95.28 0 0 3 8 Whitelist BOCA-UK 6 1 0 0.01 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc With other complex events 5 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 19 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 0 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 20 NA NA 0 0 216 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.59 NA NA NA 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 0 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 21 36150737 36169426 1 1 216 1 0 0 0 0 0.39 0.2 2 0 NA NA NA NA 5 4 5 63.84 69.44 0 0 3 4 Whitelist BOCA-UK 0.62 0.42 0 NA 0.59 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 2 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 22 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 0 0 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490908 X 62722341 144118893 1 2 216 1 1 0 0 0 0.57 0.01 1 0.13 0 NA NA NA NA NA NA 63.84 0.66 99.34 1 2 NA Whitelist BOCA-UK 0.68 0.04 0.13 0 0.64 1 No BOCA-UK CGP_donor_1490908 BOCA 0.67 3.06 Bone-Osteosarc NA 4 0.01 frameshift_insertion,17_7579409_G_-,CN:2 2 BOCA-UK DO52640 CGP_donor_1490908 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 1 54185696 84482654 6 18 462 2 2 1 1 12 0.88 0.01 5 0 0 5 3 5 9 4 7 20.83 27.05 72.95 0 2 4 Whitelist BOCA-UK 0.87 0.03 0 0 0.91 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 24 0.03 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 2 146186245 147321165 2 2 462 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 20.83 0 99.9 0 2 NA Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 3 NA NA 0 0 462 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 4 172905530 173040348 1 1 462 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 20.83 0.15 99.84 0 2 NA Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 2 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 5 343444 40967400 28 32 462 10 8 4 6 4 0.41 0.25 23 0 0 23 6 15 27 6 15 20.83 19.99 77.33 0 3 2 Whitelist BOCA-UK 10 0.85 0.49 0 0 0.62 1 Low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 60 0.06 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 6 76106264 166727720 61 91 462 20 16 12 13 30 0.47 0 65 0 0 65 6 9 65 6 9 20.83 19.04 80.81 3 0 2 Whitelist BOCA-UK 11 0.99 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 152 0.16 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 7 NA NA 0 0 462 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 8 NA NA 0 0 462 0 0 0 0 0 NA 0 NA NA NA NA NA NA 7 4 6 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 9 8314372 8438494 1 1 462 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 12 5 7 20.83 62.82 34.07 0 2 3 Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 2 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 10 50348934 97731679 7 12 462 3 1 1 2 5 0.67 0.44 15 0 0 15 9 13 16 9 9 20.83 50.87 48.95 0 2 1 Whitelist BOCA-UK 5 0.93 0.68 0 0 0.74 1 High confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc Canonical without polyploidization 19 0.02 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 11 101720341 105872169 35 64 462 11 11 5 8 29 0.42 0 43 0 0 43 6 7 52 6 6 20.83 67.73 28.13 0 3 94 Whitelist BOCA-UK 6 0.98 0 0 0 0.63 1 Low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 99 0.11 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 12 75035974 120211927 6 7 462 1 1 2 2 1 0.88 0.27 8 0 0 8 4 8 11 6 6 20.83 14 85.9 0 1 2 Whitelist BOCA-UK 0.96 0.51 0 0 0.91 1 Low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 13 0.01 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 13 104316198 106010540 9 13 462 2 4 2 1 4 0.55 0.61 7 0 0 7 5 7 11 8 8 20.83 78.52 21.29 0 1 2 Whitelist BOCA-UK 17 0.8 0.82 0 0 0.64 1 Low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc Canonical without polyploidization 22 0.02 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 14 NA NA 0 0 462 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 15 NA NA 0 0 462 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 16 53455552 89780377 15 30 462 2 2 5 6 15 0.33 0 26 0 0 26 6 11 32 7 11 20.83 37.27 57.57 0 2 1 Whitelist BOCA-UK 0.66 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 45 0.05 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 17 7531323 7839260 2 7 462 2 0 0 0 5 0.11 0.19 6 0 0 6 6 6 16 9 9 20.83 3.36 96.64 0 1 2 Whitelist BOCA-UK 0.77 0.42 0 0 0.48 1 Linked to low confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc Canonical without polyploidization 9 0.01 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 18 NA NA 0 0 462 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 19 16843361 54772913 31 100 462 8 4 10 9 69 0.44 0 78 0 0 78 7 13 80 7 13 20.83 39.98 52.74 0 3 4 Whitelist BOCA-UK X 0.62 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc With other complex events 131 0.14 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 20 NA NA 0 0 462 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 21 NA NA 0 0 462 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 22 NA NA 0 0 462 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.64 NA NA NA 1 No BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1490914 X 97627888 151461840 72 115 462 33 24 10 5 43 0 0 20 0 0 20 20 20 28 22 22 20.83 6.72 92.52 3 2 3 Whitelist BOCA-UK 19 0.2 0 0 0 0 1 Linked to high confidence BOCA-UK CGP_donor_1490914 BOCA 0.64 2.03 Bone-Osteosarc Canonical without polyploidization 187 0.2 NA 2 BOCA-UK DO52641 CGP_donor_1490914 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 1 2249362 182869104 29 86 927 10 5 7 7 57 0.62 0.01 64 0 0 64 6 8 67 6 8 65.92 58 41.98 10 4 6 Whitelist BOCA-UK 2_3_9 0.62 0.04 0 0 0.7 1 Low confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 115 0.06 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 2 98265301 240710956 30 95 927 8 5 8 9 65 0.75 0 81 0 0 81 10 16 110 16 29 65.92 60.76 36.33 0 3 4 Whitelist BOCA-UK 1_10_18_3 0.93 0 0 0 0.83 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 125 0.07 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 3 39705096 116872807 1 5 927 3 1 0 0 1 0.11 0 8 0 0 8 5 8 20 5 8 65.92 52.58 44.36 0 4 1 Whitelist BOCA-UK 0.62 0 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc Before polyploidization 9 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 4 161515724 190840263 17 84 927 4 7 2 4 67 0.39 0 65 0 0 65 11 12 131 11 12 65.92 84.46 12.84 0 1 2 Whitelist BOCA-UK 10_18_5_9 0.94 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 101 0.05 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 5 878141 41078797 57 143 927 16 14 16 11 86 0.76 0 126 0 0 126 12 12 192 12 12 65.92 46.12 51.2 0 4 3 Whitelist BOCA-UK 10_18_9 0.68 0 0 0 0.84 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 200 0.11 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 6 356593 159764627 1 8 927 0 2 0 1 5 0.3 0 12 0 0 12 4 5 13 4 5 65.92 93.99 3.19 0 3 4 Whitelist BOCA-UK 0.87 0 0 0 0.59 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 11 0.01 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 7 62514967 158846143 233 257 927 56 62 56 59 24 0.94 0 274 0 0 274 8 15 276 8 13 65.92 39.37 57.93 2 4 2 Whitelist BOCA-UK 2 0.99 0 0 0 0.95 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 490 0.26 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 8 71431403 119090655 8 8 927 3 3 1 1 0 0.57 0 22 0 0 22 9 22 34 9 22 65.92 91.22 5.22 2 4 5 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 16 0.01 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 9 1299761 9380245 3 37 927 1 2 0 0 34 0.3 0 20 0 0 20 6 8 40 6 13 65.92 97.25 0.21 0 4 2 Whitelist BOCA-UK 1_5 0.62 0.02 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 40 0.02 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 10 44478896 86379721 13 85 927 6 2 3 2 72 0.35 0 70 0 0 70 15 30 87 15 30 65.92 27.96 68.46 0 2 3 Whitelist BOCA-UK 18_5 0.93 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 98 0.05 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 11 NA NA 0 0 927 0 0 0 0 0 NA 0 NA NA NA NA NA NA 9 4 6 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 12 NA NA 0 0 927 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 13 60503494 60583074 1 4 927 0 1 0 0 3 0.39 0 5 0 0 5 0 3 8 0 3 65.92 94.94 2.28 0 2 1 Whitelist BOCA-UK 1 1 0 0 0 0.59 1 Linked to low confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 5 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 14 98662584 98929322 1 1 927 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 8 3 3 65.92 34.59 61.7 0 4 5 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 15 56339886 56351083 1 1 927 0 0 0 1 0 0.39 0.06 1 0 NA NA NA NA 13 5 11 65.92 99.85 0 0 5 NA Whitelist BOCA-UK 2 0.62 0.18 0 NA 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 2 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 16 11717695 11917660 2 2 927 1 1 0 0 0 0.57 0.76 2 0 0 NA NA NA 20 4 6 65.92 56 39.02 0 4 5 Whitelist BOCA-UK 0.68 0.92 0 0 0.64 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 4 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 17 7573620 7615932 1 1 927 1 0 0 0 0 0.39 0 2 0.15 NA NA NA NA 8 3 7 65.92 58.83 41.17 0 1 4 Whitelist BOCA-UK 0.62 0 0.15 NA 0.59 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 18 63082505 77710470 16 120 927 4 6 1 5 104 0.32 0 83 0 0 83 7 17 115 8 17 65.92 89.17 5.75 0 4 3 Whitelist BOCA-UK 10_5 0.69 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc With other complex events 136 0.07 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 19 27841370 27904117 2 2 927 0 0 0 2 0 0.11 0.41 2 0 0 NA NA NA 15 4 5 65.92 89.86 2.6 0 1 4 Whitelist BOCA-UK 0.54 0.65 0 0 0.48 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 4 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 20 NA NA 0 0 927 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 21 NA NA 0 0 927 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 22 32283158 32915023 1 1 927 1 0 0 0 0 0.39 0.76 2 0 NA NA NA NA 10 7 9 65.92 88.89 0 0 3 5 Whitelist BOCA-UK 0.62 0.92 0 NA 0.59 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 2 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528364 X 92119578 120576925 2 2 927 0 0 1 1 0 0.57 0 6 0 0 6 3 6 12 6 6 65.92 60.44 35.97 0 3 2 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1528364 BOCA 0.79 3.29 Bone-Osteosarc NA 4 0 NA 4 BOCA-UK DO52642 CGP_donor_1528364 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 1 171408523 237934806 3 4 349 1 2 0 0 1 0.3 0.06 3 0 0 NA NA NA 21 5 10 70.04 100 0 6 5 4 Whitelist BOCA-UK 0.68 0.18 0 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 7 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 2 136333297 198571117 3 5 349 1 0 1 1 2 0.8 0.63 11 0 0 11 4 5 24 4 7 70.04 75.54 21.76 0 2 4 Whitelist BOCA-UK 0.93 0.84 0 0 0.84 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 8 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 3 76596 174672869 1 6 349 5 0 0 0 1 0 0 7 0 0 7 5 7 8 5 7 70.04 99.69 0.2 0 3 1 Whitelist BOCA-UK 0.25 0 0 0 0.07 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 11 0.02 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 4 84503678 104551923 6 6 349 2 0 2 2 0 0.57 0.09 11 0 0 11 7 11 29 8 9 70.04 91.06 8.91 0 3 4 Whitelist BOCA-UK 0.68 0.24 0 0 0.64 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 12 0.02 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 5 73751289 85541184 6 10 349 2 3 1 0 4 0.34 0.01 7 0 0 7 3 4 35 9 9 70.04 44.85 52.47 3 3 2 Whitelist BOCA-UK 13 0.68 0.05 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 16 0.02 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 6 66519078 75032715 11 30 349 2 3 4 2 19 0.8 0 37 0 0 37 3 4 48 3 3 70.04 41.2 55.57 3 28 36 Whitelist BOCA-UK 13 1 0 0 0 0.84 1 Linked to high confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 41 0.06 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 7 10913029 81367617 1 5 349 2 1 0 0 2 0.3 0 7 0 0 7 3 4 14 3 3 70.04 98.7 1.08 0 3 4 Whitelist BOCA-UK 0.68 0.01 0 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 8 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 8 120451201 120675889 2 5 349 0 1 1 0 3 0.57 0.03 3 0 0 NA NA NA 9 3 4 70.04 99.99 0 0 4 5 Whitelist BOCA-UK 0.68 0.11 0 0 0.64 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 7 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 9 NA NA 0 0 349 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 10 44224895 114123851 11 12 349 3 3 3 2 1 0.97 0.9 3 0 0 NA NA NA 5 3 3 70.04 26.82 73 1 2 3 Whitelist BOCA-UK 0.93 1 0 0 0.98 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 23 0.03 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 11 62779074 123882917 2 6 349 0 2 0 2 2 0.26 0.7 14 0 0 14 4 7 16 4 7 70.04 99.42 0.15 0 4 6 Whitelist BOCA-UK 0.62 0.9 0 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 10 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 12 70291799 112943997 9 13 349 2 3 2 2 4 0.95 0 23 0 0 23 9 18 41 9 9 70.04 71.12 28.8 0 3 2 Whitelist BOCA-UK 0.9 0 0 0 0.97 1 High confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 22 0.03 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 13 103350092 106906740 11 39 349 4 4 0 3 28 0.27 0 12 0 0 12 7 7 30 8 8 70.04 26.32 73.68 0 3 4 Whitelist BOCA-UK 0.84 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 50 0.07 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 14 75411701 75579473 1 1 349 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 70.04 96.29 0 0 4 5 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 2 0 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 15 24114334 35331632 8 11 349 2 3 2 1 3 0.8 0.01 11 0 0 11 3 5 22 4 6 70.04 44.23 50.4 0 2 1 Whitelist BOCA-UK 0.74 0.03 0 0 0.84 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 19 0.03 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 16 46997066 86664636 3 6 349 1 2 0 0 3 0.3 0.24 10 0 0 10 4 7 11 4 7 70.04 85.92 13.97 0 3 4 Whitelist BOCA-UK 0.54 0.48 0 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 9 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 17 7579527 67110499 1 9 349 0 0 2 1 6 0.3 0.07 15 0 0 15 3 5 18 4 6 70.04 85.59 9.77 0 3 4 Whitelist BOCA-UK 0.62 0.21 0 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 12 0.02 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 18 23406391 41615950 4 31 349 1 0 2 1 27 0.57 0 12 0 0 12 3 8 17 4 9 70.04 43.08 56.88 0 3 2 Whitelist BOCA-UK 13 0.93 0 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 35 0.05 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 19 823664 835898 1 1 349 0 0 0 1 0 0.39 0 1 0.01 0 NA NA NA 14 6 6 70.04 20.84 71.7 1 4 NA Whitelist BOCA-UK 0.62 0.02 0.01 0 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 2 0 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 20 2357948 2376693 1 1 349 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 6 3 5 70.04 92.98 0 0 4 6 Whitelist BOCA-UK 0.62 0.33 NA NA 0.59 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 2 0 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 21 NA NA 0 0 349 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.34 NA NA NA 1 No BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 22 42649209 42824602 1 4 349 0 0 0 1 3 0.39 0.07 2 0 0 NA NA NA 5 0 0 70.04 88.89 0 0 4 6 Whitelist BOCA-UK 12 0.62 0.22 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 5 0.01 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528371 X 137305293 154877002 23 30 349 5 3 6 9 7 0.35 0 34 0 0 34 6 14 58 7 14 70.04 57.01 39.58 19 3 4 Whitelist BOCA-UK 0.68 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1528371 BOCA 0.33 3.49 Bone-Osteosarc With other complex events 53 0.08 NA 3 BOCA-UK DO52643 CGP_donor_1528371 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 1 62362251 106122988 2 6 113 0 0 2 0 4 0.11 0.08 11 0 0 11 3 7 19 4 5 53.41 40.11 59.89 0 2 1 Whitelist BOCA-UK 8 0.68 0.23 0 0 0.48 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 8 0.04 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 2 171676936 222890322 7 11 113 2 0 2 3 4 0.44 0 11 0 0 11 5 6 23 5 6 53.41 64.28 35.63 0 2 5 Whitelist BOCA-UK 0.62 0 0 0 0.64 0 Low confidence BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc With other complex events 18 0.08 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 3 165323653 197070231 3 3 113 0 1 1 1 0 0.8 0.71 2 0 0 NA NA NA 7 4 5 53.41 18.28 81.6 1 2 3 Whitelist BOCA-UK 0.87 0.9 0 0 0.84 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 6 0.03 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 4 158494371 169024921 3 3 113 1 0 1 1 0 0.8 0.85 3 0 0 NA NA NA 8 3 4 53.41 97.86 1.96 0 1 2 Whitelist BOCA-UK 0.87 0.98 0 0 0.84 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 6 0.03 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 5 NA NA 0 0 113 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.16 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 6 57857858 66058853 3 3 113 1 0 1 1 0 0.8 0.33 2 0 0 NA NA NA 6 3 3 53.41 96 3.74 0 3 4 Whitelist BOCA-UK 0.87 0.58 0 0 0.84 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 6 0.03 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 7 NA NA 0 0 113 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.26 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 8 1749318 135606364 1 15 113 3 0 1 0 11 0.11 0 11 0 0 11 6 11 15 6 6 53.41 88.8 10.9 0 3 4 Whitelist BOCA-UK 0.62 0 0 0 0.48 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 19 0.08 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 9 NA NA 0 0 113 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 10 88930242 91178821 5 5 113 2 0 2 1 0 0.53 0.02 9 0 0 9 9 9 15 9 9 53.41 24.12 75.7 0 1 0 Whitelist BOCA-UK 0.68 0.08 0 0 0.64 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 10 0.04 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 11 NA NA 0 0 113 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 12 NA NA 0 0 113 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.29 0 NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 13 NA NA 0 0 113 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.41 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 14 NA NA 0 0 113 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.52 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 15 50891213 50953899 1 1 113 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA 9 3 4 53.41 48.26 46.79 0 4 NA Whitelist BOCA-UK 0.62 0.33 0 NA 0.59 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 2 0.01 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 16 NA NA 0 0 113 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 0 NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 17 NA NA 0 0 113 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.78 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 18 170210 877232 1 3 113 0 1 0 0 2 0.39 0.03 3 0.04 0.01 NA NA NA 8 4 4 53.41 57.03 38.16 0 1 2 Whitelist BOCA-UK 0.62 0.12 0.04 0.01 0.59 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 4 0.02 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 19 12908610 34272185 1 6 113 0 1 0 1 4 0.57 0 4 0 0 4 3 4 8 4 6 53.41 56.24 35.62 0 4 2 Whitelist BOCA-UK 0.68 0 0 0 0.64 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 8 0.04 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 20 6111801 14223154 2 3 113 0 0 1 1 1 0.57 0 1 0 0 NA NA NA 9 4 4 53.41 84.34 15.14 0 3 NA Whitelist BOCA-UK 0.62 0 0 0 0.64 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 5 0.02 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 21 NA NA 0 0 113 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.37 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 22 NA NA 0 0 113 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.35 NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528374 X NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1528374 BOCA 0.69 2.64 Bone-Osteosarc NA 0 0 frameshift_deletion,17_7579309_-_GACC,CN:4 2 BOCA-UK DO52645 CGP_donor_1528374 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 1 201830040 243796639 1 2 247 1 1 0 0 0 0.57 0 3 0 0 NA NA NA NA NA NA 43.89 0.03 99.96 0 2 1 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 4 0.01 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 2 143820724 160979294 5 18 247 0 4 0 1 13 0.04 0 13 0 0 13 7 7 21 7 9 43.89 72.16 24.91 0 2 3 Whitelist BOCA-UK 17_19 0.16 0 0 0 0.36 1 High confidence BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc With other complex events 23 0.05 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 3 47428343 47559377 1 1 247 0 0 1 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 43.89 99.89 0 0 1 NA Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 2 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 4 1727274 190019821 1 4 247 1 3 0 0 0 0.11 0.01 5 0 0 5 3 5 5 3 3 43.89 0.14 99.64 0 2 1 Whitelist BOCA-UK 0.54 0.05 0 0 0.48 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 8 0.02 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 5 NA NA 0 0 247 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 6 494867 75444947 21 29 247 3 8 4 6 8 0.42 0 43 0 0 43 20 24 45 20 20 43.89 70.44 26.74 1 2 1 Whitelist BOCA-UK 17 0.68 0 0 0 0.63 1 High confidence BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc With other complex events 50 0.1 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 7 5527926 25924371 1 5 247 1 3 0 0 1 0.11 0.4 7 0 0 7 6 7 11 6 7 43.89 18.27 81.68 0 3 4 Whitelist BOCA-UK 0.45 0.64 0 0 0.48 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 9 0.02 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 8 49405842 130707518 1 7 247 0 5 0 0 2 0 0.19 8 0 0 8 3 4 10 3 4 43.89 67.14 29.3 0 4 5 Whitelist BOCA-UK 6 0.41 0.41 0 0 0.07 1 Linked to high confidence BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc With other complex events 12 0.02 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 9 14062842 137575111 1 4 247 2 1 0 0 1 0.3 0.07 4 0 0 4 4 4 5 5 5 43.89 14.08 85.78 0 1 2 Whitelist BOCA-UK 0.62 0.21 0 0 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 7 0.01 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 10 45552589 113647008 4 5 247 1 0 1 2 1 0.57 0.09 3 0 0 NA NA NA 10 4 4 43.89 98.83 1.03 0 1 2 Whitelist BOCA-UK 0.93 0.25 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 9 0.02 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 11 26271060 80728575 1 6 247 1 1 0 0 4 0.57 0.03 5 0 0 5 5 5 8 8 8 43.89 30.29 65.51 3 2 1 Whitelist BOCA-UK 0.68 0.12 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 8 0.02 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 12 3256623 72254334 2 2 247 0 0 1 1 0 0.57 0.1 4 0 0 4 4 4 6 5 5 43.89 49.26 50.66 1 1 2 Whitelist BOCA-UK 0.68 0.26 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 4 0.01 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 13 94476528 94764584 1 1 247 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 43.89 91.37 8.63 0 1 NA Whitelist BOCA-UK 0.62 0.08 NA NA 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 2 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 14 22816818 22920526 1 1 247 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 3 3 43.89 0.14 98.94 0 2 5 Whitelist BOCA-UK 0.62 0.1 NA NA 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 2 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 15 NA NA 0 0 247 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.22 NA NA NA 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 16 208634 34257618 29 39 247 9 5 9 6 10 0.62 0 1 0 0 NA NA NA NA NA NA 43.89 48.4 51.25 0 2 NA Whitelist BOCA-UK 0.62 0 0 0 0.7 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 68 0.14 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 17 7586844 41815159 1 27 247 1 2 1 1 22 0.9 0 21 0 0 21 7 9 23 7 7 43.89 76.09 19.47 0 1 2 Whitelist BOCA-UK 11_19_2_6 0.7 0 0 0 0.92 1 Linked to high confidence BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc With other complex events 32 0.06 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 18 62463665 75918174 1 2 247 0 0 1 1 0 0.57 0.23 4 0 0 4 3 4 5 3 3 43.89 99.93 0.04 0 1 0 Whitelist BOCA-UK 0.68 0.47 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 4 0.01 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 19 5000187 56724969 3 18 247 1 2 0 0 15 0.3 0 18 0 0 18 8 9 19 8 8 43.89 28.56 71.27 0 2 1 Whitelist BOCA-UK 17_2 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc With other complex events 21 0.04 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 20 30138671 30260004 1 1 247 0 1 0 0 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 43.89 0 99.01 0 2 NA Whitelist BOCA-UK 0.62 0.75 0 NA 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 2 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 21 23062056 47557041 3 13 247 0 2 1 0 10 0.3 0 3 0 0 NA NA NA NA NA NA 43.89 0.02 76.14 0 2 1 Whitelist BOCA-UK 0.8 0 0 0 0.59 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 16 0.03 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 22 NA NA 0 0 247 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1528381 X 41840051 67269522 2 2 247 1 1 0 0 0 0.57 0.77 2 0 0 NA NA NA 10 7 7 43.89 1.1 98.9 7 2 3 Whitelist BOCA-UK 0.68 0.93 0 0 0.64 1 No BOCA-UK CGP_donor_1528381 BOCA 0.76 1.75 Bone-Osteosarc NA 4 0.01 NA 1 BOCA-UK DO52646 CGP_donor_1528381 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 1 49821890 50896990 1 2 76 0 2 0 0 0 0.11 0.52 2 0 0 NA NA NA 4 4 4 41.34 44.86 55.14 0 1 2 Whitelist BOCA-UK 0.54 0.76 0 0 0.48 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 2 63937031 228898172 1 6 76 1 1 0 1 3 0.8 0.68 1 0 0 NA NA NA NA NA NA 41.34 26.28 73.62 0 2 NA Whitelist BOCA-UK 0.62 0.88 0 0 0.84 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 9 0.06 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 3 126395411 127231753 2 2 76 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA 4 3 3 41.34 63.07 36.9 0 2 NA Whitelist BOCA-UK 0.68 0.08 0 0 0.64 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 4 113099459 113116590 1 1 76 1 0 0 0 0 0.39 0.17 1 0 NA NA NA NA 5 5 5 41.34 66.99 32.78 0 2 NA Whitelist BOCA-UK 0.62 0.38 0 NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 5 793952 21649959 1 2 76 0 2 0 0 0 0.11 0.34 4 0.01 0 4 3 4 8 3 3 41.34 31.1 68.76 0 3 4 Whitelist BOCA-UK 0.54 0.59 0.01 0 0.48 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 6 15679814 166581719 1 4 76 1 2 0 0 1 0.3 1 5 0.01 0 5 3 5 6 4 4 41.34 23.67 76.19 2 2 1 Whitelist BOCA-UK 0.62 1 0.01 0 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 7 0.05 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 7 7292732 122521524 3 7 76 1 2 0 0 4 0.3 0.02 4 0 0 4 3 4 8 6 6 41.34 42.93 54.4 2 3 2 Whitelist BOCA-UK 0.77 0.08 0 0 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 10 0.07 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 8 NA NA 0 0 76 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.69 NA NA NA 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 9 89533620 89562138 1 1 76 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 41.34 0 99.3 0 2 NA Whitelist BOCA-UK 0.62 0.77 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 10 89668157 89718913 1 1 76 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 41.34 99.82 0 0 1 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 11 83968892 105091624 1 2 76 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 7 5 5 41.34 10.35 89.21 0 2 1 Whitelist BOCA-UK 0.68 1 NA 0 0.64 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 12 NA NA 0 0 76 0 0 0 0 0 NA 0.41 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.65 0 NA NA 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 13 70929891 70996564 1 1 76 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 41.34 85.79 0.06 0 1 2 Whitelist BOCA-UK 0.62 0.76 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 14 83142465 83163255 1 1 76 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 41.34 84.07 0.02 0 1 2 Whitelist BOCA-UK 0.62 0.91 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 15 23011507 67926698 1 4 76 0 2 0 0 2 0.11 0.06 2 0 0 NA NA NA NA NA NA 41.34 0.06 84.39 0 2 3 Whitelist BOCA-UK 0.54 0.19 0 0 0.48 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 6 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 16 47484465 81350189 1 6 76 3 1 0 0 2 0.11 0.02 5 0 0 5 3 5 5 3 3 41.34 0.98 99.01 1 2 1 Whitelist BOCA-UK 0.68 0.07 0 0 0.48 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 10 0.07 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 17 30349427 56537006 1 2 76 0 2 0 0 0 0.11 0.15 1 0 0 NA NA NA NA NA NA 41.34 29.49 70.49 1 2 NA Whitelist BOCA-UK 0.54 0.35 0 0 0.48 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 18 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 19 13942464 13993160 1 1 76 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 41.34 0 99.83 0 2 NA Whitelist BOCA-UK 0.62 0.07 0 NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 20 19365805 19416293 1 1 76 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA 4 3 3 41.34 93.21 6.56 0 3 4 Whitelist BOCA-UK 0.62 0.88 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 21 15861453 30684851 1 4 76 1 0 0 0 3 0.39 0 3 0 0 NA NA NA NA NA NA 41.34 0.12 77.24 0 2 1 Whitelist BOCA-UK 0.68 0.01 0 0 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 5 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 22 31890443 32006021 1 1 76 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 41.34 0.23 76 0 2 3 Whitelist BOCA-UK 0.62 0.81 NA NA 0.59 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602516 X NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1602516 BOCA 0.63 1.67 Bone-Epith NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:1 2 BOCA-UK DO52564 CGP_donor_1602516 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 1 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 2 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 3 NA NA 0 0 71 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.19 NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 4 35358971 48132846 11 24 71 1 2 3 5 13 0.36 0 15 0 0 15 11 15 19 11 12 38.02 94.75 2.88 3 3 2 Whitelist BOCA-UK 0.68 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith Canonical without polyploidization 35 0.25 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 5 164749400 168374976 4 4 71 0 2 0 2 0 0.26 0.21 7 0 0 7 7 7 11 8 8 38.02 7 92.85 0 3 2 Whitelist BOCA-UK 0.62 0.44 0 0 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 8 0.06 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 6 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 7 1240014 1298137 1 1 71 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.02 0 99.78 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 8 NA NA 0 0 71 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.66 NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 9 128111058 128344780 3 3 71 1 1 1 0 0 0.8 0.76 3 0 0 NA NA NA NA NA NA 38.02 99.7 0.14 0 1 2 Whitelist BOCA-UK 0.87 0.92 0 0 0.84 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 6 0.04 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 10 NA NA 0 0 71 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.93 NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 11 70490283 84181957 3 10 71 2 0 0 1 7 0.3 0 2 0 0 NA NA NA 13 6 6 38.02 35.82 60.61 0 2 3 Whitelist BOCA-UK 4 0.62 0 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith With other complex events 13 0.09 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 12 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 13 58405668 66744012 1 2 71 0 0 0 1 1 0.39 1 3 NA NA NA NA NA 4 4 4 38.02 54.73 45.27 0 2 1 Whitelist BOCA-UK 0.68 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 3 0.02 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 14 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 16 81547414 81637047 1 1 71 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA 5 5 5 38.02 37.22 57.91 0 1 NA Whitelist BOCA-UK 0.62 0.9 NA NA 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 17 NA NA 0 0 71 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.69 NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 18 65985499 70334006 4 4 71 1 1 1 1 0 1 0 8 0 0 8 6 7 15 8 8 38.02 69.86 25.49 0 1 2 Whitelist BOCA-UK 1 0 0 0 1 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 8 0.06 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 19 9901511 9941689 1 1 71 0 1 0 0 0 0.39 0.05 2 0 0 NA NA NA 5 3 3 38.02 18.74 80.85 0 2 3 Whitelist BOCA-UK 0.62 0.17 0 0 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 20 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 21 NA NA 0 0 71 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.81 NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 22 17707027 46734561 3 3 71 2 1 0 0 0 0.3 0.01 3 0 0 NA NA NA NA NA NA 38.02 19.64 80.36 0 2 1 Whitelist BOCA-UK 0.62 0.05 0 0 0.59 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 6 0.04 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1602529 X NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1602529 BOCA 0.77 1.64 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52565 CGP_donor_1602529 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 1 NA NA 0 0 7 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.06 0 NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 2 170203865 170395372 1 1 7 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 24.47 0.08 99.82 0 1 2 Whitelist BOCA-UK 0.62 0.7 NA NA 0.59 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 2 0.14 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 12 50729945 50743546 1 1 7 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 24.47 99.92 0 0 3 NA Whitelist BOCA-UK 0.62 0.53 NA NA 0.59 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 2 0.14 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 20 NA NA 0 0 7 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.34 NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 21 36193328 36255906 1 1 7 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 4 3 3 24.47 7.19 70.16 0 1 2 Whitelist BOCA-UK 0.62 0.23 NA NA 0.59 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 2 0.14 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691121 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691121 BOCA 0.93 2.25 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52568 CGP_donor_1691121 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 1 NA NA 0 0 21 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.88 NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 2 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 3 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 5 32314153 64139880 1 6 21 1 2 0 0 3 0.3 0 3 0 0 NA NA NA 4 4 4 31.38 27.04 70.26 0 3 2 Whitelist BOCA-UK 0.93 0 0 0 0.59 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 9 0.21 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 6 NA NA 0 0 21 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.03 0 NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 8 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 9 21846237 22037433 1 1 21 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA 4 3 3 31.38 32.33 67.5 0 0 1 Whitelist BOCA-UK 0.62 0.79 NA NA 0.59 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 2 0.05 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 12 41226076 65270692 1 3 21 0 1 1 0 1 0.57 0 1 0 0 NA NA NA 6 6 6 31.38 3.43 96.49 0 2 NA Whitelist BOCA-UK 0.62 0 0 0 0.64 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 5 0.12 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 13 28599788 95250744 1 2 21 0 0 1 0 1 0.39 0 1 0 NA NA NA NA 4 4 4 31.38 17.39 78.97 0 2 NA Whitelist BOCA-UK 0.68 0 0 NA 0.59 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 3 0.07 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 20 15604028 15730944 1 1 21 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 31.38 99.01 0 0 3 NA Whitelist BOCA-UK 0.62 0.62 NA NA 0.59 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 2 0.05 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691131 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691131 BOCA 0.32 2.1 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52572 CGP_donor_1691131 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 1 150864102 151123382 1 1 325 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 8 4 4 54.51 75.55 24.45 0 4 5 Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 2 184287853 237379430 22 44 325 8 5 4 5 22 0.65 0 27 0 0 27 11 12 40 11 12 54.51 87.14 9.89 1 6 1 Whitelist BOCA-UK 18 0.93 0 0 0 0.73 1 High confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 66 0.1 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 3 10399785 174835866 1 8 325 5 3 0 0 0 0.03 0.01 7 0 0 7 3 5 7 3 5 54.51 0.22 99.66 0 2 0 Whitelist BOCA-UK 0.41 0.04 0 0 0.33 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 16 0.02 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 4 8011858 45028784 1 3 325 1 1 0 0 1 0.57 0 7 0 0 7 3 5 13 5 5 54.51 41.12 58.65 0 3 6 Whitelist BOCA-UK 0.62 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 5 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 5 49680325 176939873 24 29 325 5 4 9 6 5 0.51 0 20 0 0 20 8 12 28 8 12 54.51 62.45 34.81 1 3 4 Whitelist BOCA-UK 11 0.86 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 53 0.08 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 6 32255732 170226668 2 19 325 1 2 2 1 13 0.88 0 25 0 0 25 8 17 26 8 17 54.51 44.07 53 0 2 3 Whitelist BOCA-UK X 0.93 0 0 0 0.91 1 Linked to low confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 25 0.04 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 7 78106165 147485635 1 4 325 3 1 0 0 0 0.11 0.02 8 0 0 8 4 8 12 5 5 54.51 59.96 37.32 0 4 2 Whitelist BOCA-UK 0.54 0.08 0 0 0.48 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 8 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 8 54201065 139568174 12 14 325 3 4 2 3 2 0.88 0.02 23 0 0 23 8 19 28 8 9 54.51 72.41 24.06 2 3 4 Whitelist BOCA-UK 11 0.98 0.09 0 0 0.91 1 High confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 26 0.04 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 9 88634830 88646203 1 1 325 0 1 0 0 0 0.39 0.06 1 0 NA NA NA NA 17 4 7 54.51 64.59 32.3 0 5 NA Whitelist BOCA-UK 0.62 0.19 0 NA 0.59 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 10 6393285 37038322 1 2 325 1 0 1 0 0 0.57 0 7 0 0 7 5 7 14 5 5 54.51 32.58 64.07 0 2 1 Whitelist BOCA-UK 0.68 0.03 0 0 0.64 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 11 9575691 134135389 1 13 325 2 1 2 1 7 0.88 0.6 11 0 0 11 6 7 12 6 7 54.51 17.95 77.82 1 2 3 Whitelist BOCA-UK 5_8 0.54 0.81 0 0 0.91 1 Linked to high confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 19 0.03 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 12 43238873 115873652 1 2 325 1 1 0 0 0 0.57 0 4 0 0 4 3 4 12 5 6 54.51 58.85 37.41 0 3 2 Whitelist BOCA-UK 0.68 0.02 0 0 0.64 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 13 25836625 91251082 2 2 325 0 0 1 1 0 0.57 0.28 8 0 0 8 5 8 16 5 7 54.51 45.3 53.84 0 2 0 Whitelist BOCA-UK 0.68 0.53 0 0 0.64 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 14 90388577 100788712 3 3 325 0 1 1 1 0 0.8 0.87 5 0 0 5 3 5 11 5 5 54.51 67.98 31.96 0 3 2 Whitelist BOCA-UK 0.87 1 0 0 0.84 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 15 NA NA 0 0 325 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.01 NA NA NA 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 16 72947289 85858490 1 2 325 1 1 0 0 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 54.51 1.82 93.18 0 2 NA Whitelist BOCA-UK 0.68 0.06 NA 0 0.64 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 17 31173818 42361453 1 1 325 0 0 1 0 0 0.39 0.49 3 0 NA NA NA NA 14 5 5 54.51 78.16 17.38 0 2 3 Whitelist BOCA-UK 0.62 0.74 0 NA 0.59 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 18 20691527 64759312 22 31 325 2 5 7 8 9 0.28 0 43 0 0 43 7 9 52 7 10 54.51 72.63 22.42 10 5 6 Whitelist BOCA-UK 2 0.68 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 53 0.08 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 19 1003699 31085707 2 19 325 0 1 0 1 17 0.57 0 21 0 0 21 7 14 27 7 7 54.51 45.16 47.55 0 5 4 Whitelist BOCA-UK 6_X 0.62 0 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 21 0.03 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 20 20783057 20797678 1 1 325 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 54.51 92.93 0 0 4 NA Whitelist BOCA-UK 0.62 0.05 NA NA 0.59 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 21 NA NA 0 0 325 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.42 NA NA NA 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 22 NA NA 0 0 325 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691133 X 56780045 99873812 14 48 325 6 1 3 4 34 0.29 0 38 0 0 38 6 7 41 6 7 54.51 68.93 27.69 7 2 3 Whitelist BOCA-UK 19_6_8 0.79 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1691133 BOCA 0.68 2.87 Bone-Osteosarc With other complex events 62 0.1 nonsynonymous_SNV,17_7578526_T_C,CN:3 2 BOCA-UK DO52574 CGP_donor_1691133 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 2 168899892 168953486 1 1 32 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 7 7 7 19.1 97.02 0.01 0 3 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 2 0.03 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 3 76401361 181248351 1 2 32 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 19.1 0.26 99.62 0 1 2 Whitelist BOCA-UK 0.54 1 NA 0 0.48 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 4 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 5 12307944 165232694 1 6 32 5 1 0 0 0 0.01 0.01 12 0 0 12 5 9 12 5 9 19.1 0.81 99.07 0 1 2 Whitelist BOCA-UK 0.25 0.06 0 0 0.19 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 12 0.19 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 6 65694076 65748030 2 2 32 2 0 0 0 0 0.11 0.72 2 NA 0 NA NA NA 5 3 3 19.1 97.05 0.09 0 1 3 Whitelist BOCA-UK 0.54 0.9 NA 0 0.48 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 7 111809141 111890760 2 2 32 1 1 0 0 0 0.57 0.09 1 0 0 NA NA NA NA NA NA 19.1 0.42 96.82 0 2 NA Whitelist BOCA-UK 0.68 0.25 0 0 0.64 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 8 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 9 30301926 30473296 1 1 32 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 5 5 5 19.1 1.84 95.03 0 1 2 Whitelist BOCA-UK 0.62 0.61 NA NA 0.59 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 2 0.03 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 10 8992713 57199359 1 3 32 3 0 0 0 0 0.03 0.18 7 0 0 7 5 5 8 6 6 19.1 13.28 83.29 0 1 2 Whitelist BOCA-UK 0.41 0.4 0 0 0.33 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 6 0.09 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 11 81771621 84181338 1 2 32 2 0 0 0 0 0.11 0.66 2 NA 0 NA NA NA NA NA NA 19.1 0.05 99.52 0 1 2 Whitelist BOCA-UK 0.54 0.87 NA 0 0.48 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 12 38154648 100023177 1 2 32 2 0 0 0 0 0.11 0.66 1 NA 0 NA NA NA NA NA NA 19.1 0 99.92 0 2 NA Whitelist BOCA-UK 0.54 0.87 NA 0 0.48 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 13 81681029 81870117 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.1 0.16 99.84 0 1 2 Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 2 0.03 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 14 44310861 44416346 1 1 32 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.1 0.33 98.76 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 2 0.03 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 17 61162355 61350990 1 1 32 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 19.1 0 100 0 2 NA Whitelist BOCA-UK 0.62 0.81 NA NA 0.59 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 2 0.03 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 18 10491486 45899479 2 2 32 0 0 1 1 0 0.57 0.05 5 0 0 5 0 4 6 0 4 19.1 6.25 89.07 0 5 2 Whitelist BOCA-UK 0.68 0.17 0 0 0.64 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 4 0.06 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691134 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691134 BOCA 0.45 2.08 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52575 CGP_donor_1691134 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 1 243279040 243334856 1 1 136 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 41.88 0.02 99.98 0 1 2 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 2 235969025 242549973 2 7 136 0 1 1 0 5 0.57 0.64 5 0 0 5 5 5 13 6 6 41.88 17.55 82.36 0 1 2 Whitelist BOCA-UK 0.96 0.85 0 0 0.64 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 9 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 3 60493403 116897514 1 2 136 2 0 0 0 0 0.11 0.5 4 0 0 4 4 4 8 5 5 41.88 53.21 46.65 0 0 1 Whitelist BOCA-UK 0.54 0.75 0 0 0.48 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 4 58224828 177222591 1 2 136 2 0 0 0 0 0.11 0.04 4 NA 0 4 4 4 6 6 6 41.88 25.76 71.87 0 1 2 Whitelist BOCA-UK 0.54 0.13 NA 0 0.48 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 5 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 6 33642835 46170883 5 5 136 2 1 1 1 0 0.9 0.86 9 0 0 9 4 7 17 4 7 41.88 95.17 4.54 0 2 3 Whitelist BOCA-UK 0.93 0.99 0 0 0.92 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 10 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 7 77912366 110745381 1 2 136 1 0 0 1 0 0.57 1 3 0 0 NA NA NA 7 5 5 41.88 44.72 55.02 0 0 1 Whitelist BOCA-UK 0.68 1 0 0 0.64 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 8 NA NA 0 0 136 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.16 NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 9 1002337 47212849 32 43 136 7 7 9 9 11 0.92 0 54 0 0 54 9 24 56 9 9 41.88 52.94 46.92 6 1 2 Whitelist BOCA-UK 0.86 0 0 0 0.94 1 High confidence BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc With other complex events 75 0.28 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 10 39095508 89737588 1 3 136 2 0 0 1 0 0.3 0.22 3 0 0 NA NA NA NA NA NA 41.88 99.82 0 0 1 0 Whitelist BOCA-UK 0.62 0.45 0 0 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 11 83912393 84734825 1 3 136 2 1 0 0 0 0.3 0.22 6 0 0 6 4 6 8 6 6 41.88 19.68 79.9 0 2 1 Whitelist BOCA-UK 0.62 0.45 0 0 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 12 109856261 109870565 1 1 136 0 1 0 0 0 0.39 0.84 2 0 NA NA NA NA 8 8 8 41.88 63.64 32.45 0 1 2 Whitelist BOCA-UK 0.62 0.97 0 NA 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 13 NA NA 0 0 136 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.26 NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 14 29292199 29308637 1 1 136 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA 4 4 4 41.88 38.9 60.21 0 3 NA Whitelist BOCA-UK 0.62 0.7 NA NA 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 15 22351922 46971261 2 10 136 0 0 1 1 8 0.57 0 6 0 0 6 4 6 9 4 6 41.88 15.61 79.51 13 2 1 Whitelist BOCA-UK 9 0.96 0 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc Canonical without polyploidization 12 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 16 86507847 88546871 2 2 136 0 1 1 0 0 0.57 0 1 0 0 NA NA NA 13 6 8 41.88 21.13 78.18 0 2 NA Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 17 37687044 75134728 1 5 136 2 0 0 1 2 0.3 0 8 0 0 8 5 8 12 5 5 41.88 35.93 59.64 0 2 1 Whitelist BOCA-UK 0.62 0 0 0 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 8 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 18 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 19 24570500 24586643 1 1 136 0 0 0 1 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 41.88 51.63 41.09 0 1 2 Whitelist BOCA-UK 0.62 0.76 NA NA 0.59 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 20 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 21 33576946 40152008 11 11 136 4 5 2 0 0 0.15 0 10 0 0 10 10 10 11 11 11 41.88 56.36 13.35 0 1 2 Whitelist BOCA-UK 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc Canonical without polyploidization 22 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 22 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691135 X 44321177 151711852 2 4 136 1 1 0 0 2 0.57 0.56 8 0 0 8 3 5 9 3 3 41.88 90.21 9.56 9 3 1 Whitelist BOCA-UK 0.54 0.78 0 0 0.64 1 No BOCA-UK CGP_donor_1691135 BOCA 0.73 1.66 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 1 BOCA-UK DO52576 CGP_donor_1691135 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 1 194465302 194479268 1 1 81 0 0 1 0 0 0.39 0.68 1 0 NA NA NA NA NA NA NA 8.66 0 100 0 2 NA Whitelist BOCA-UK 0.62 0.88 0 NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 2 152178957 152197499 1 1 81 0 0 1 0 0 0.39 0.42 2 0 NA NA NA NA 4 3 3 8.66 9.9 90 0 1 2 Whitelist BOCA-UK 0.62 0.67 0 NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 3 87496465 87510387 1 1 81 0 0 1 0 0 0.39 0.51 1 0 NA NA NA NA NA NA NA 8.66 0 99.97 0 2 NA Whitelist BOCA-UK 0.62 0.75 0 NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 4 248166 142536998 1 3 81 0 0 2 1 0 0.3 1 1 0 0 NA NA NA NA NA NA 8.66 0 99.99 0 2 NA Whitelist BOCA-UK 0.62 1 0 0 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 6 0.04 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 5 NA NA 0 0 81 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 6 121556185 121566416 1 1 81 0 0 1 0 0 0.39 0.34 1 0 NA NA NA NA NA NA NA 8.66 0 99.83 0 2 NA Whitelist BOCA-UK 0.62 0.59 0 NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 7 85167636 142165211 1 3 81 0 0 3 0 0 0.03 0.45 2 0 0 NA NA NA NA NA NA 8.66 16.25 83.49 0 2 3 Whitelist BOCA-UK 0.41 0.7 0 0 0.33 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 6 0.04 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 8 NA NA 0 0 81 0 0 0 0 0 NA 0.61 NA 0.03 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.82 0.03 NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 9 NA NA 0 0 81 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.93 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 10 NA NA 0 0 81 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.67 0 NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 11 NA NA 0 0 81 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.41 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 12 NA NA 0 0 81 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.52 0 NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 13 83311028 83335158 1 1 81 0 0 1 0 0 0.39 0.21 1 0 NA NA NA NA NA NA NA 8.66 0 100 0 2 NA Whitelist BOCA-UK 0.62 0.43 0 NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 14 68922193 68957852 1 1 81 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.66 1.25 95.07 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 15 NA NA 0 0 81 0 0 0 0 0 NA 0.49 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.74 0 NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 16 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 17 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 18 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 19 NA NA 0 0 81 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.09 0 NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 20 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 21 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 22 NA NA 0 0 81 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.83 NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691138 X NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691138 BOCA 0.63 1.99 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52577 CGP_donor_1691138 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 3 157500328 158311482 1 1 2 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 7.01 0 99.97 0 2 NA Whitelist BOCA-UK 0.62 0.33 NA NA 0.59 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 2 0.5 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 5 163799398 164308107 1 1 2 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 7.01 0 99.86 0 2 NA Whitelist BOCA-UK 0.62 0.31 NA NA 0.59 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 2 0.5 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691145 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691145 BOCA 0.26 1.98 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52580 CGP_donor_1691145 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 1 146691688 249090423 35 35 279 12 10 8 5 0 0.38 0 79 0 0 79 13 67 95 15 15 46.55 87.84 9.07 0 4 5 Whitelist BOCA-UK 0.62 0 0 0 0.59 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc With other complex events 70 0.13 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 2 4339643 84633644 11 11 279 3 2 2 4 0 0.8 0.52 22 0 0 22 8 22 31 9 9 46.55 97.24 0.07 0 4 3 Whitelist BOCA-UK 0.87 0.76 0 0 0.84 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc With other complex events 22 0.04 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 3 78199279 90320009 5 9 279 3 1 0 1 4 0.28 0.72 8 0 0 8 8 8 17 9 9 46.55 1.97 97.99 0 2 3 Whitelist BOCA-UK 18 0.97 0.9 0 0 0.59 0 Linked to high confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc Canonical without polyploidization 14 0.03 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA False positive; manually removed BOCA-UK::CGP_donor_1691147 4 182065832 182577589 2 2 279 2 0 0 0 0 0.11 0.02 4 0 0 4 3 4 15 7 8 46.55 97.53 0 0 4 3 Whitelist BOCA-UK 0.54 0.07 0 0 0.48 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 5 8251063 30412870 1 2 279 2 0 0 0 0 0.11 0 4 NA 0 4 3 4 9 3 5 46.55 25.45 71.85 1 4 2 Whitelist BOCA-UK 0.54 0 NA 0 0.48 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 6 NA NA 0 0 279 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 7 16002556 146850210 1 6 279 5 0 0 0 1 0 0.06 13 0 0 13 8 9 15 8 9 46.55 96.82 0.53 0 3 4 Whitelist BOCA-UK 0.25 0.19 0 0 0.07 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 11 0.02 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 8 121801782 134076197 10 11 279 2 5 2 1 1 0.31 0.13 9 0 0 9 9 9 18 10 10 46.55 99.99 0 0 4 5 Whitelist BOCA-UK 0.62 0.32 0 0 0.59 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc After polyploidization 21 0.04 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 9 120976086 120999195 1 1 279 0 0 1 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 46.55 0.01 99.86 0 1 2 Whitelist BOCA-UK 0.62 0.02 NA NA 0.59 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 10 NA NA 0 0 279 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 11 79281514 80713366 1 5 279 4 1 0 0 0 0.04 0.02 8 0 0 8 4 8 10 5 5 46.55 99.33 0.25 0 3 4 Whitelist BOCA-UK 0.45 0.09 0 0 0.36 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 10 0.02 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 12 2029720 26708686 2 2 279 1 0 0 1 0 0.57 0.01 2 0 0.04 NA NA NA 5 3 3 46.55 3.26 93 0 2 3 Whitelist BOCA-UK 0.68 0.03 0 0.04 0.64 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 13 109526406 110879881 2 2 279 0 0 1 1 0 0.57 0.18 2 0 0 NA NA NA 6 3 4 46.55 8.89 91.11 0 3 4 Whitelist BOCA-UK 0.68 0.4 0 0 0.64 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 14 NA NA 0 0 279 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.02 NA NA NA 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 15 33299268 98372536 23 26 279 7 2 6 8 3 0.31 0 29 0 0 29 8 9 33 8 9 46.55 11.32 88.55 2 2 3 Whitelist BOCA-UK 0.68 0 0 0 0.59 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc With other complex events 49 0.09 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 16 78756737 79162253 2 2 279 2 0 0 0 0 0.11 0.46 4 0 0 4 3 4 10 4 4 46.55 57.43 38.05 0 2 1 Whitelist BOCA-UK 0.54 0.7 0 0 0.48 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 17 19555647 20055786 1 3 279 1 0 1 1 0 0.8 0.71 6 0 0 6 3 3 19 3 3 46.55 11.92 83.65 0 20 21 Whitelist BOCA-UK 0.87 0.9 0 0 0.84 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 6 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 18 2636202 13923208 7 7 279 3 1 2 1 0 0.67 0.01 13 0 0 13 9 11 18 10 10 46.55 3.39 96.58 1 3 2 Whitelist BOCA-UK 0.77 0.06 0 0 0.74 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc Canonical without polyploidization 14 0.03 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 19 2553855 32893078 41 47 279 12 4 15 10 6 0.1 0 72 0 0 72 5 7 77 5 7 46.55 45.88 46.83 2 5 4 Whitelist BOCA-UK 0.62 0 0 0 0.48 0 High confidence BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc With other complex events 88 0.16 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 20 31913887 56113085 1 2 279 1 1 0 0 0 0.57 0.3 3 NA 0 NA NA NA 5 3 3 46.55 62.15 36.86 0 2 3 Whitelist BOCA-UK 0.68 0.55 NA 0 0.64 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 21 NA NA 0 0 279 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 22 23680143 33496662 1 2 279 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 46.55 100 0 0 3 4 Whitelist BOCA-UK 0.54 1 NA 0 0.48 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 4 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691147 X 31656631 33734447 4 4 279 4 0 0 0 0 0.01 0.05 1 0 0 NA NA NA NA NA NA 46.55 20.14 79.61 0 2 NA Whitelist BOCA-UK 0.21 0.17 0 0 0.16 0 No BOCA-UK CGP_donor_1691147 BOCA 0.72 2.91 Bone-Osteosarc NA 8 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:2 2 BOCA-UK DO52582 CGP_donor_1691147 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 1 72603677 72935762 1 1 8 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 4.8 0 100 0 2 NA Whitelist BOCA-UK 0.62 0.32 NA NA 0.59 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 2 0.12 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 6 NA NA 0 0 8 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.23 NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 7 94049046 130626958 2 2 8 0 0 1 1 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 4.8 0 99.77 0 2 NA Whitelist BOCA-UK 0.68 0.2 NA 0 0.64 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 4 0.25 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 10 103387336 105166059 1 2 8 1 0 0 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 4.8 0 99.82 0 2 NA Whitelist BOCA-UK 0.54 0.02 NA NA 0.59 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 3 0.19 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 15 NA NA 0 0 8 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.42 NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691148 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691148 BOCA 0.5 1.93 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52583 CGP_donor_1691148 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 1 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 2 95756719 226666706 13 13 93 3 2 4 4 0 0.84 0 32 0 0 32 10 10 48 10 11 92.7 97.28 0.03 4 4 5 Whitelist BOCA-UK 0.9 0 0 0 0.88 1 High confidence BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc With other complex events 26 0.14 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 3 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 4 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 5 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 6 13835204 13865706 1 1 93 0 0 0 1 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 92.7 99.85 0 0 4 NA Whitelist BOCA-UK 0.62 0.15 NA NA 0.59 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 2 0.01 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 7 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 8 108730600 131590501 1 2 93 0 0 0 1 1 0.39 1 1 NA NA NA NA NA 4 3 3 92.7 99.99 0 0 5 NA Whitelist BOCA-UK 0.54 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 3 0.02 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 9 NA NA 0 0 93 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.52 NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 10 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 11 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 12 39356696 73985137 53 56 93 17 16 8 12 3 0.28 0 77 0 0 77 4 5 79 4 4 92.7 99.92 0 3 4 48 Whitelist BOCA-UK 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc With other complex events 109 0.59 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 13 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 14 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 15 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 16 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 17 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 18 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 19 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 20 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 21 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 22 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691149 X NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691149 BOCA 0.84 4.27 Bone-Osteosarc NA 0 0 NA 105 BOCA-UK DO52584 CGP_donor_1691149 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 1 2737096 33713570 4 10 103 2 1 0 1 6 0.57 0.02 15 0 0 15 15 15 19 17 17 27.17 5.42 94.58 0 2 1 Whitelist BOCA-UK 15 0.86 0.07 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith Canonical without polyploidization 14 0.07 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 2 63947954 236854958 2 4 103 0 0 2 2 0 0.26 0.28 1 0 0 NA NA NA NA NA NA 27.17 0 99.9 0 2 NA Whitelist BOCA-UK 0.62 0.53 0 0 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 8 0.04 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 3 14996245 123140421 1 6 103 0 3 0 0 3 0.03 0.7 8 0 0 8 8 8 9 9 9 27.17 82.32 17.54 0 1 2 Whitelist BOCA-UK 5 0.54 0.89 0 0 0.33 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 9 0.04 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 4 1841302 1925469 1 1 103 0 1 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 27.17 0 99.99 0 2 NA Whitelist BOCA-UK 0.62 0.37 NA NA 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 5 6599597 97249112 1 6 103 1 2 0 0 3 0.3 0.01 7 0 0 7 7 7 13 13 13 27.17 17.05 82.81 0 2 1 Whitelist BOCA-UK 0.54 0.03 0 0 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 9 0.04 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 6 57167199 166598014 1 4 103 0 1 1 1 1 0.8 1 3 0 0 NA NA NA 6 4 4 27.17 33.43 66.55 0 2 4 Whitelist BOCA-UK 0.68 1 0 0 0.84 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 7 0.03 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 7 4021572 70253693 1 3 103 1 2 0 0 0 0.3 0.38 5 0.01 0 5 3 5 5 3 3 27.17 0.2 99.58 0 2 1 Whitelist BOCA-UK 0.62 0.63 0.01 0 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 6 0.03 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 8 53304933 91980761 1 4 103 0 1 1 0 2 0.57 0.11 4 0 0 4 3 4 9 5 5 27.17 1.87 94.31 0 2 1 Whitelist BOCA-UK 0.68 0.28 0 0 0.64 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 6 0.03 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 9 103768954 108356485 2 10 103 0 1 0 1 8 0.57 0 7 0 0 7 7 7 10 10 10 27.17 48.19 51.64 0 2 1 Whitelist BOCA-UK 18 0.68 0 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith Canonical without polyploidization 12 0.06 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 10 20140538 121468665 1 2 103 1 1 0 0 0 0.57 0.34 2 NA 0.02 NA NA NA NA NA NA 27.17 99.81 0 0 0 1 Whitelist BOCA-UK 0.68 0.59 NA 0.02 0.64 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 4 0.02 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 11 88351735 129883268 1 2 103 0 2 0 0 0 0.11 0.24 2 NA 0 NA NA NA 4 4 4 27.17 37.01 62.56 0 1 2 Whitelist BOCA-UK 0.54 0.48 NA 0 0.48 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 4 0.02 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 12 23125079 23928708 1 1 103 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 27.17 0 99.92 0 2 NA Whitelist BOCA-UK 0.62 0.26 NA NA 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 13 50564560 114302532 1 2 103 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 27.17 0 99.25 0 2 NA Whitelist BOCA-UK 0.68 1 0 0 0.64 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 4 0.02 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 14 NA NA 0 0 103 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 10 10 10 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.03 0 NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 15 33454042 35471244 2 6 103 1 1 0 0 4 0.57 0 7 0 0 7 7 7 10 10 10 27.17 33.37 66.53 0 1 2 Whitelist BOCA-UK 1 0.68 0.01 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith Canonical without polyploidization 8 0.04 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 16 79216705 80388361 1 1 103 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 27.17 10.91 88.72 0 2 3 Whitelist BOCA-UK 0.62 1 NA NA 0.59 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 2 0.01 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 17 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 18 19084928 61967083 16 32 103 5 2 2 7 16 0.21 0 27 0 0 27 16 27 30 16 16 27.17 26.77 68.59 0 1 2 Whitelist BOCA-UK 0.74 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith With other complex events 48 0.23 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 19 NA NA 0 0 103 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 20 NA NA 0 0 103 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 21 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 22 NA NA 0 0 103 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.31 NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691150 X NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691150 BOCA 0.76 1.72 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52585 CGP_donor_1691150 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 1 NA NA 0 0 5 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.59 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 2 NA NA 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 4 NA NA 0 0 5 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.54 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 5 NA NA 0 0 5 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.52 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 6 NA NA 0 0 5 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 14 NA NA 0 0 5 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.35 NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691151 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691151 BOCA 0.32 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52587 CGP_donor_1691151 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 14 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.01 NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 15 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.01 NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691152 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691152 BOCA 0.62 2 Bone-Benign NA 0 0 NA 2 BOCA-UK DO52588 CGP_donor_1691152 female C41.9 NA NA NA NA Included Bone-Benign BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 1 43414779 94272729 1 3 52 0 3 0 0 0 0.03 0.06 4 0 0 4 4 4 7 5 7 24.8 0.09 99.91 0 2 3 Whitelist BOCA-UK 0.41 0.19 0 0 0.33 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 6 0.06 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 2 70404495 218414609 1 4 52 0 2 1 0 1 0.3 0.62 6 0 0 6 3 6 8 3 7 24.8 10.33 89.56 0 2 3 Whitelist BOCA-UK 0.68 0.84 0 0 0.59 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 7 0.07 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 3 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 4 246165 90018543 1 3 52 1 1 0 1 0 0.8 0.4 2 0 0 NA NA NA NA NA NA 24.8 0.12 99.85 0 2 4 Whitelist BOCA-UK 0.87 0.64 0 0 0.84 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 6 0.06 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 5 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 6 166473460 166609454 4 4 52 0 2 1 1 0 0.57 0.01 4 0 0 4 3 4 7 3 3 24.8 0.12 99.74 0 3 2 Whitelist BOCA-UK 0.68 0.05 0 0 0.64 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 8 0.08 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 7 44064146 44242670 1 2 52 1 0 1 0 0 0.57 1 2 NA 0 NA NA NA 5 3 3 24.8 0.24 99.54 0 2 4 Whitelist BOCA-UK 0.68 1 NA 0 0.64 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 4 0.04 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 8 101272144 145645096 1 4 52 0 2 0 0 2 0.11 0.34 2 0 0 NA NA NA 4 3 3 24.8 5.99 93.52 0 2 3 Whitelist BOCA-UK 1 0.68 0.59 0 0 0.48 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 6 0.06 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 9 9247957 22212704 1 3 52 2 0 0 0 1 0.11 0.15 5 0 0 5 3 5 7 4 4 24.8 8.53 90.8 0 1 0 Whitelist BOCA-UK 0.62 0.34 0 0 0.48 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 5 0.05 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 10 126707725 126830579 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 24.8 28.06 68.59 0 0 2 Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 2 0.02 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 11 16342917 16376508 1 1 52 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 24.8 0.51 99.07 0 2 NA Whitelist BOCA-UK 0.62 0.91 NA NA 0.59 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 2 0.02 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 12 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 13 NA NA 0 0 52 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 14 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 16 79212168 80102950 1 3 52 0 1 0 0 2 0.39 0.05 2 NA 0 NA NA NA 6 3 6 24.8 89.84 10.12 0 2 4 Whitelist BOCA-UK 0.62 0.16 NA 0 0.59 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 4 0.04 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 17 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 18 NA NA 0 0 52 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.86 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 19 1079283 1103110 1 1 52 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.8 0.32 99.5 0 2 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 2 0.02 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 21 NA NA 0 0 52 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.72 NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 0 0 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691154 X 80348829 80591856 2 2 52 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 5 3 3 24.8 99.84 0.16 0 1 2 Whitelist BOCA-UK 0.68 0.15 0 0 0.64 0 No BOCA-UK CGP_donor_1691154 BOCA 0.51 1.88 Bone-Epith NA 4 0.04 NA 3 BOCA-UK DO52590 CGP_donor_1691154 male C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 1 82602793 82619570 1 1 25 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 39.91 0 100 0 2 NA Whitelist BOCA-UK 0.62 0.9 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 2 189358705 189957770 4 4 25 0 4 0 0 0 0.01 0 5 0 0 5 0 3 10 6 6 39.91 5.5 94.41 0 2 3 Whitelist BOCA-UK 0.21 0.01 0 0 0.16 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 8 0.16 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 4 62342912 62519100 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 4 4 39.91 30.09 67.54 0 1 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 5 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 6 121872297 122712116 2 2 25 0 2 0 0 0 0.11 0.19 3 0 0 NA NA NA NA NA NA 39.91 99.4 0.45 0 1 2 Whitelist BOCA-UK 0.54 0.41 0 0 0.48 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 4 0.08 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 8 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 10 130625011 130645632 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 39.91 99.82 0 0 1 NA Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 11 123066657 123079420 1 1 25 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 39.91 0.01 99.56 0 2 3 Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 13 89844032 89930055 1 1 25 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 39.91 100 0 0 1 NA Whitelist BOCA-UK 0.62 0.81 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 14 36515436 59063474 1 2 25 2 0 0 0 0 0.11 0.18 2 NA 0 NA NA NA NA NA NA 39.91 0.02 99.07 0 1 2 Whitelist BOCA-UK 0.54 0.4 NA 0 0.48 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 4 0.08 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 16 75771522 75786677 1 1 25 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 39.91 0.02 99.97 0 1 2 Whitelist BOCA-UK 0.62 0.74 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 17 38174300 38333945 1 1 25 0 1 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 39.91 99.79 0.2 0 1 2 Whitelist BOCA-UK 0.62 0.74 NA NA 0.59 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 2 0.04 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 19 NA NA 0 0 25 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 7 4 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.24 NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691205 X 155181034 155228818 1 2 25 0 0 1 1 0 0.57 0.36 1 NA 0 NA NA NA NA NA NA 39.91 99.97 0 0 1 NA Whitelist BOCA-UK 0.68 0.62 NA 0 0.64 0 No BOCA-UK CGP_donor_1691205 BOCA 0.43 1.6 Bone-Osteosarc NA 4 0.08 nonsynonymous_SNV,17_7577095_C_G,CN:1 1 BOCA-UK DO52591 CGP_donor_1691205 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 1 146556486 247517843 10 15 415 1 3 3 3 5 0.75 0.32 26 0 0 26 6 10 31 6 10 62.71 72.2 27.8 1 3 2 Whitelist BOCA-UK 2_7 0.65 0.57 0 0 0.83 1 Low confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 25 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 2 5332159 125723076 2 20 415 0 1 0 1 18 0.57 0.43 12 0 0 12 7 12 20 7 13 62.71 74.44 25.48 8 2 4 Whitelist BOCA-UK 13 0.62 0.68 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 22 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 3 1488486 168477786 5 20 415 0 3 0 2 15 0.14 0.63 15 0 0 15 4 6 19 4 6 62.71 32.76 67.19 1 2 3 Whitelist BOCA-UK 2 0.77 0.84 0 0 0.59 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 25 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 4 5978674 35601827 2 8 415 0 1 0 1 6 0.57 0.02 2 0 0 NA NA NA 12 11 11 62.71 99.33 0.57 0 3 4 Whitelist BOCA-UK 0.21 0.07 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 10 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 5 4320966 44667330 63 92 415 12 21 16 14 29 0.42 0 112 0 0 112 14 43 116 14 19 62.71 63.98 33.34 5 5 4 Whitelist BOCA-UK 0.68 0 0 0 0.62 1 High confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 155 0.19 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 6 4215254 157204309 1 5 415 1 1 0 0 3 0.57 0 3 0 0 NA NA NA NA NA NA 62.71 72.19 27.67 0 3 2 Whitelist BOCA-UK 7 0.62 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 7 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 7 3613250 157967149 3 20 415 0 0 1 2 17 0.3 0.38 13 0 0 13 5 13 14 5 5 62.71 86.18 11.27 2 4 3 Whitelist BOCA-UK 1_13_8 0.86 0.63 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 23 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 8 50128153 138434525 31 45 415 4 9 9 9 14 0.49 0 30 0 0 30 16 16 43 16 16 62.71 66.48 29.34 2 5 4 Whitelist BOCA-UK 5_7 0.87 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 76 0.09 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 9 22119326 29890366 1 16 415 2 0 1 2 11 0.53 0.45 10 0 0 10 5 5 16 6 6 62.71 89.73 7.73 0 3 4 Whitelist BOCA-UK 1 0.79 0.69 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 21 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 10 30279238 102924042 1 10 415 1 1 1 1 6 1 0.1 9 0 0 9 7 9 10 8 8 62.71 75.13 24.67 0 2 1 Whitelist BOCA-UK 0.68 0.27 0 0 1 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 14 0.02 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 11 101190279 102411965 2 2 415 0 1 0 1 0 0.57 0.16 2 0 0 NA NA NA 17 9 9 62.71 8.92 87.01 0 5 7 Whitelist BOCA-UK 0.68 0.37 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 4 0 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 12 44918063 54236515 2 2 415 0 1 0 1 0 0.57 0 1 0 0 NA NA NA 7 4 7 62.71 83.5 16 0 2 NA Whitelist BOCA-UK 0.68 0.03 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 4 0 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 13 28262441 100044824 4 12 415 1 2 0 1 8 0.57 0.14 11 0 0 11 5 5 13 5 5 62.71 98.21 1.79 18 1 0 Whitelist BOCA-UK 2_7 0.93 0.33 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 16 0.02 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 14 22675397 81188714 1 10 415 0 5 2 2 1 0.13 1 17 0 0 17 6 17 18 6 6 62.71 99.07 0.01 0 4 3 Whitelist BOCA-UK 0.62 1 0 0 0.55 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 19 0.02 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 15 42458069 101019405 4 12 415 1 1 2 0 8 0.57 0.18 3 0 0 NA NA NA NA NA NA 62.71 100 0 1 3 4 Whitelist BOCA-UK 5_7 0.25 0.39 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 16 0.02 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 16 117927 85638502 16 18 415 4 5 2 5 2 0.68 0 21 0 0 21 4 11 21 4 6 62.71 27.86 72.01 0 2 3 Whitelist BOCA-UK 0.68 0 0 0 0.76 1 Low confidence BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc With other complex events 34 0.04 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 17 21294897 73641330 2 17 415 0 1 2 1 13 0.57 0 25 0 0 25 4 6 35 4 6 62.71 53.35 46.63 27 2 3 Whitelist BOCA-UK 13_2 0.62 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 21 0.03 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 18 58766573 61637727 2 6 415 0 1 1 0 4 0.57 0.88 2 0 0 NA NA NA 6 4 4 62.71 26.56 68.8 0 1 2 Whitelist BOCA-UK 0.54 1 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 8 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 19 7624733 13686507 4 4 415 2 0 1 1 0 0.57 0.21 8 0 0 8 5 8 16 7 13 62.71 69.57 22.48 0 2 4 Whitelist BOCA-UK 0.68 0.44 0 0 0.64 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 8 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 20 NA NA 0 0 415 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.05 NA NA NA 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 21 NA NA 0 0 415 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 22 19642714 42999163 3 5 415 1 1 1 0 2 0.8 0.36 3 0 0 NA NA NA 7 6 7 62.71 88.89 0 1 3 4 Whitelist BOCA-UK 0.62 0.61 0 0 0.84 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 8 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691207 X 441119 55763864 1 9 415 1 1 0 1 6 0.8 0.01 6 0.03 0 6 4 6 7 4 4 62.71 7.07 92.6 3 2 1 Whitelist BOCA-UK 10 0.68 0.06 0.03 0 0.84 1 No BOCA-UK CGP_donor_1691207 BOCA 0.71 2.58 Bone-Osteosarc NA 12 0.01 NA 3 BOCA-UK DO52593 CGP_donor_1691207 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 1 174820823 174936473 1 2 124 1 1 0 0 0 0.57 0 4 NA 0 4 4 4 7 7 7 37.6 1.23 98.77 0 2 3 Whitelist BOCA-UK 0.68 0.02 NA 0 0.64 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 4 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 2 5443874 239741986 3 3 124 0 1 1 1 0 0.8 0.1 7 0.1 0.02 7 7 7 7 7 7 37.6 10.84 86.46 9 2 1 Whitelist BOCA-UK 0.87 0.27 0.1 0.02 0.84 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 6 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 3 116527409 116821432 1 1 124 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 37.6 0.15 99.71 0 1 2 Whitelist BOCA-UK 0.62 0.06 NA NA 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 4 27990522 39404508 4 4 124 0 1 1 2 0 0.57 0 9 0 0 9 9 9 26 10 10 37.6 89.32 10.45 0 2 1 Whitelist BOCA-UK 0.68 0.01 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc Canonical without polyploidization 8 0.03 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 5 151136086 167190908 1 2 124 2 0 0 0 0 0.11 0.71 4 0 0 4 4 4 10 7 7 37.6 89.03 8.29 0 1 2 Whitelist BOCA-UK 0.54 0.9 0 0 0.48 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 4 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 6 18673985 77468311 1 5 124 2 0 1 0 2 0.3 1 11 0 0 11 6 7 13 6 8 37.6 69.9 27.28 0 2 1 Whitelist BOCA-UK 0.62 1 0 0 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 8 0.03 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 7 NA NA 0 0 124 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.38 NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 8 14236528 100667014 1 2 124 1 0 0 1 0 0.57 0.1 2 NA 0.01 NA NA NA NA NA NA 37.6 0.01 99.98 0 1 2 Whitelist BOCA-UK 0.68 0.26 NA 0.01 0.64 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 4 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 9 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 10 89683084 89740812 1 1 124 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 37.6 99.82 0 0 1 NA Whitelist BOCA-UK 0.62 0.32 NA NA 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 11 59962284 134707313 51 61 124 11 12 15 13 10 0.88 0 47 0 0 47 6 7 52 6 7 37.6 94.89 0.89 22 4 3 Whitelist BOCA-UK 18_4 0.96 0 0 0 0.91 1 High confidence BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc With other complex events 112 0.45 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 12 NA NA 0 0 124 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.12 NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 13 28060517 48886556 1 2 124 0 0 1 0 1 0.39 1 2 0 NA NA NA NA NA NA NA 37.6 100 0 0 0 1 Whitelist BOCA-UK 0.68 1 0 NA 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 3 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 14 NA NA 0 0 124 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.69 NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 15 27220125 28084863 1 1 124 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 37.6 0.84 99.06 0 1 2 Whitelist BOCA-UK 0.62 0.51 NA NA 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 16 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 17 NA NA 0 0 124 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 18 329522 9437572 2 7 124 0 1 0 1 5 0.57 0 13 0 0 13 6 12 17 6 6 37.6 19.04 76.31 0 1 4 Whitelist BOCA-UK 4 0.77 0 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc With other complex events 9 0.04 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 19 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 20 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 21 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 22 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691208 X 32497165 32758691 1 1 124 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 37.6 100 0 0 1 NA Whitelist BOCA-UK 0.62 0.09 NA NA 0.59 1 No BOCA-UK CGP_donor_1691208 BOCA 0.94 1.69 Bone-Osteosarc NA 2 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:1 2 BOCA-UK DO52594 CGP_donor_1691208 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 1 151613490 246812975 3 10 66 3 1 1 1 4 0.57 0 14 0 0 14 8 11 17 8 8 50.98 41.46 58.54 0 3 4 Whitelist BOCA-UK 0.62 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc With other complex events 16 0.12 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 2 NA NA 0 0 66 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.62 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 3 4681054 85638696 1 2 66 1 0 1 0 0 0.57 0.33 1 NA 0.04 NA NA NA NA NA NA 50.98 99.88 0 0 1 NA Whitelist BOCA-UK 0.68 0.58 NA 0.04 0.64 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 4 0.03 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 4 NA NA 0 0 66 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.32 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 5 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 6 NA NA 0 0 66 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.41 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 7 54937660 61521339 2 3 66 0 1 0 1 1 0.57 0.02 5 0 0 5 5 5 11 7 7 50.98 17.33 79.86 0 2 1 Whitelist BOCA-UK 0.87 0.1 0 0 0.64 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 5 0.04 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 8 85769707 91239025 2 2 66 2 0 0 0 0 0.11 0.01 5 0 0 5 3 5 11 7 10 50.98 61.68 38.31 0 2 3 Whitelist BOCA-UK 0.54 0.03 0 0 0.48 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 4 0.03 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 9 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 10 104289148 104420300 1 1 66 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 50.98 99.82 0 0 0 1 Whitelist BOCA-UK 0.62 0.63 NA NA 0.59 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 2 0.02 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 11 72056596 84051091 1 3 66 1 1 0 0 1 0.57 1 4 NA 0 4 3 4 5 3 3 50.98 1.03 98.54 0 2 1 Whitelist BOCA-UK 0.62 1 NA 0 0.64 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 5 0.04 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 12 87921718 121987152 2 5 66 0 0 1 1 3 0.57 0.24 4 0 0 4 4 4 5 5 5 50.98 0.37 99.38 2 2 3 Whitelist BOCA-UK 0.68 0.48 0 0 0.64 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 7 0.05 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 13 73045802 94620127 4 6 66 1 2 1 0 2 0.57 0 8 0 0 8 8 8 14 13 13 50.98 73.61 25.59 0 1 2 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 10 0.08 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 14 NA NA 0 0 66 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.9 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 15 NA NA 0 0 66 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 16 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 17 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 18 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 19 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 20 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BOCA-UK NA 1 NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 22 30033455 30064318 1 1 66 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 50.98 99.94 0.06 0 1 2 Whitelist BOCA-UK 0.62 0.77 NA NA 0.59 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 2 0.02 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691209 X NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691209 BOCA 0.7 1.54 Bone-Osteosarc NA 0 0 nonsynonymous_SNV,17_7577517_G_A,CN:1 2 BOCA-UK DO52595 CGP_donor_1691209 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 1 72450161 223087052 1 3 183 0 1 1 1 0 0.8 0.01 2 0 0 NA NA NA 4 3 3 77.42 100 0 0 4 6 Whitelist BOCA-UK 0.87 0.03 0 0 0.84 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 6 0.02 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 2 NA NA 0 0 183 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 3 179456581 181172636 3 3 183 1 0 1 1 0 0.8 0.31 7 0 0 7 6 7 17 6 8 77.42 51.63 45.22 0 2 3 Whitelist BOCA-UK 0.87 0.56 0 0 0.84 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 6 0.02 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 4 41055177 105660847 2 4 183 0 1 2 1 0 0.57 0.03 6 0 0 6 3 5 8 3 7 77.42 72.54 24.98 0 2 4 Whitelist BOCA-UK 0.68 0.1 0 0 0.64 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 8 0.02 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 5 124008690 125373362 1 1 183 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 77.42 99.11 0.75 0 2 4 Whitelist BOCA-UK 0.62 0.03 NA NA 0.59 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 6 71087051 106378178 1 3 183 0 0 1 1 1 0.57 0.64 5 0 0 5 3 5 10 4 6 77.42 99.79 0.07 0 3 4 Whitelist BOCA-UK 0.62 0.85 0 0 0.64 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 5 0.01 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 7 NA NA 0 0 183 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.2 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 8 51474228 62447080 5 6 183 2 1 0 2 1 0.53 0.4 16 0 0 16 7 14 17 7 14 77.42 99.99 0 2 8 5 Whitelist BOCA-UK 0.93 0.64 0 0 0.64 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 11 0.03 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 9 90338614 98608467 6 26 183 1 1 2 2 20 0.88 0 28 0 0 28 10 18 49 10 18 77.42 70.46 28.79 0 4 5 Whitelist BOCA-UK 0.68 0 0 0 0.91 1 High confidence BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc With other complex events 32 0.09 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 10 NA NA 0 0 183 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.08 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 11 NA NA 0 0 183 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.06 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 12 66698784 98376745 32 56 183 6 5 9 12 24 0.29 0 55 0 0 55 11 21 65 11 21 77.42 91.16 8.83 2 3 4 Whitelist BOCA-UK 9 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc With other complex events 88 0.24 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 13 NA NA 0 0 183 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.27 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 14 NA NA 0 0 183 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.64 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 15 NA NA 0 0 183 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 16 NA NA 0 0 183 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 17 25441812 34068072 2 10 183 1 1 0 0 8 0.57 0 9 0 0 9 8 9 15 8 8 77.42 68.35 27.22 0 2 4 Whitelist BOCA-UK 19 0.62 0 0 0 0.64 1 Linked to low confidence BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc Before polyploidization 12 0.03 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 18 NA NA 0 0 183 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 19 7542257 27863221 11 20 183 1 4 3 3 9 0.63 0 32 0 0 32 5 9 36 5 9 77.42 70.06 22.66 2 14 12 Whitelist BOCA-UK 17 0.86 0 0 0 0.71 1 Low confidence BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc With other complex events 31 0.08 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 20 NA NA 0 0 183 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 21 NA NA 0 0 183 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.74 NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 22 NA NA 0 0 183 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691210 X 92218822 131935168 1 2 183 0 0 1 1 0 0.57 0.61 1 0 0 NA NA NA NA NA NA 77.42 99.77 0 0 4 NA Whitelist BOCA-UK 0.68 0.82 0 0 0.64 1 No BOCA-UK CGP_donor_1691210 BOCA 0.85 3.59 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52596 CGP_donor_1691210 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 1 20463312 245809116 1 28 606 2 6 1 3 16 0.2 0.04 40 0 0 40 8 18 44 8 10 61.65 80.76 16.2 0 4 5 Whitelist BOCA-UK 16_9 0.68 0.14 0 0 0.59 1 Linked to high confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 40 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 2 9233757 238199400 15 52 606 1 4 5 5 37 0.41 0.01 76 0 0 76 15 42 77 15 15 61.65 61.85 35.45 0 3 4 Whitelist BOCA-UK 17_9 0.68 0.04 0 0 0.62 1 High confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 67 0.06 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 3 31257334 39452574 3 24 606 0 1 1 1 21 0.8 0 14 0 0 14 3 6 73 9 13 61.65 62.01 34.84 0 5 7 Whitelist BOCA-UK 16 0.68 0 0 0 0.84 1 Linked to high confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 27 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 4 39643156 81985932 8 51 606 1 4 1 2 43 0.39 0 43 0 0 43 4 5 59 10 14 61.65 71.52 25.9 0 4 5 Whitelist BOCA-UK 16_20_5_9 0.68 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 59 0.05 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 5 27518365 44838185 15 30 606 4 5 4 2 15 0.74 0 43 0 0 43 5 10 64 5 5 61.65 12.23 84.98 0 8 3 Whitelist BOCA-UK 9 0.86 0.01 0 0 0.82 1 Low confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 45 0.04 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 6 64700674 116890400 3 5 606 1 1 1 0 2 0.8 0 12 0 0 12 5 5 18 6 6 61.65 59.13 37.69 0 2 3 Whitelist BOCA-UK 0.93 0 0 0 0.84 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 8 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 7 69881607 152054901 3 6 606 3 1 1 1 0 0.57 0 22 0 0 22 13 17 29 13 14 61.65 99.76 0.01 0 5 4 Whitelist BOCA-UK 0.68 0.02 0 0 0.64 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 12 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 8 123080855 123274679 2 3 606 0 1 1 0 1 0.57 0 3 0 0 NA NA NA 14 3 3 61.65 96.48 0 0 4 6 Whitelist BOCA-UK 0.62 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 5 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 9 72321762 137935609 28 91 606 11 8 4 5 63 0.23 0 86 0 0 86 9 10 109 9 10 61.65 93.08 6.79 0 5 4 Whitelist BOCA-UK 1_2 0.68 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 119 0.1 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 10 75596885 76423145 2 2 606 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 7 5 5 61.65 0.76 99.06 0 2 1 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 4 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 11 1368421 44085211 15 65 606 6 1 3 5 50 0.27 0 43 0 0 43 4 11 88 7 8 61.65 54.57 45.24 2 3 4 Whitelist BOCA-UK 1_16_2_9 0.98 0 0 0 0.59 1 Low confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 80 0.07 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 12 3188935 66466643 1 3 606 1 2 0 0 0 0.3 0 7 0 0 7 3 4 9 4 5 61.65 61.62 34.7 0 2 3 Whitelist BOCA-UK 0.62 0 0 0 0.59 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 6 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 13 73417013 73584713 1 1 606 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 61.65 20.66 79.34 0 1 2 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 14 38400131 38438517 1 1 606 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 4 3 3 61.65 99.09 0 0 3 NA Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 15 65597243 65876828 1 1 606 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 61.65 0.27 99.63 0 2 3 Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 2 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 16 6326850 23636186 9 26 606 1 1 3 4 17 0.39 0 28 0 0 28 9 10 59 9 9 61.65 97.53 2.34 0 6 3 Whitelist BOCA-UK 0.82 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 35 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 17 996864 13569641 4 19 606 3 1 0 0 15 0.11 0 23 0 0 23 8 11 47 8 11 61.65 93.86 1.69 0 4 5 Whitelist BOCA-UK 2 0.62 0 0 0 0.48 1 High confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 23 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 18 534211 13324606 1 2 606 0 2 0 0 0 0.11 0 3 NA 0.04 NA NA NA NA NA NA 61.65 99.96 0 0 4 5 Whitelist BOCA-UK 0.54 0 NA 0.04 0.48 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 4 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 19 7281972 41134872 23 86 606 7 7 3 6 63 0.6 0 77 0 0 77 4 8 84 4 8 61.65 41.54 51.18 0 9 7 Whitelist BOCA-UK 16_17_2_5_9 0.78 0 0 0 0.67 1 Low confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 109 0.09 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 20 14482537 55742991 1 17 606 2 2 0 0 13 0.26 0.16 17 0 0 17 8 9 19 10 10 61.65 89.8 3.08 0 4 3 Whitelist BOCA-UK 5 0.54 0.37 0 0 0.59 1 Linked to low confidence BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc With other complex events 21 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 21 27148039 45079584 1 3 606 0 3 0 0 0 0.03 0.85 5 0 0 5 5 5 7 5 5 61.65 65.48 4.81 0 3 4 Whitelist BOCA-UK 0.41 0.99 0 0 0.33 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 6 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 22 28795756 32310395 1 2 606 1 1 0 0 0 0.57 0.06 1 NA 0 NA NA NA NA NA NA 61.65 0 100 0 2 NA Whitelist BOCA-UK 0.68 0.18 NA 0 0.64 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 4 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691211 X 40644237 40916563 2 2 606 0 2 0 0 0 0.11 0 4 0 0 4 3 4 15 3 5 61.65 80.88 18.89 0 5 2 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1691211 BOCA 0.62 3.16 Bone-Osteosarc NA 4 0 nonsynonymous_SNV,17_7577114_T_C,CN:4 2 BOCA-UK DO52597 CGP_donor_1691211 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 1 240384329 248714171 19 19 135 1 7 7 4 0 0.16 0 23 0 0 23 6 17 53 6 17 87.89 94.89 1.93 3 2 3 Whitelist BOCA-UK 0.62 0 0 0 0.59 0 Low confidence BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc With other complex events 38 0.14 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 2 71017650 71130857 1 1 135 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 87.89 99.9 0 0 4 NA Whitelist BOCA-UK 0.62 0.01 NA NA 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 3 34348901 195633247 2 8 135 3 2 0 3 0 0.39 0.09 19 0 0 19 4 6 22 5 6 87.89 99.92 0.08 0 4 3 Whitelist BOCA-UK 0.62 0.25 0 0 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 16 0.06 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 4 13716403 24400934 1 2 135 0 1 0 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 87.89 99.98 0 0 4 NA Whitelist BOCA-UK 0.68 0.04 NA 0 0.64 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 5 23291110 23487887 1 1 135 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 87.89 96.86 0 0 4 6 Whitelist BOCA-UK 0.62 0.08 NA NA 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 6 NA NA 0 0 135 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.03 NA NA NA 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 7 126150406 150160722 1 3 135 1 1 1 0 0 0.8 0.33 7 0 0 7 3 4 8 3 5 87.89 99.69 0.08 0 4 3 Whitelist BOCA-UK 0.87 0.59 0 0 0.84 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 6 0.02 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 8 28641628 28652717 1 1 135 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 87.89 99.99 0 2 3 4 Whitelist BOCA-UK 0.62 0.07 NA NA 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 9 14638768 26392657 6 12 135 3 0 2 1 6 0.34 0 14 0 0 14 7 7 21 7 7 87.89 99.3 0 1 7 8 Whitelist BOCA-UK 21 0.68 0 0 0 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 18 0.07 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA False positive; manually removed BOCA-UK::CGP_donor_1691212 10 38938837 99079126 1 3 135 0 2 0 1 0 0.3 0.3 2 0 0 NA NA NA NA NA NA 87.89 96.65 0 3 3 4 Whitelist BOCA-UK 0.62 0.54 0 0 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 6 0.02 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 11 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 12 58804800 58981676 1 1 135 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 87.89 99.92 0 0 4 5 Whitelist BOCA-UK 0.62 0.45 NA NA 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 13 44114029 87016922 2 6 135 2 0 0 0 4 0.11 0.05 10 0 0 10 5 8 11 5 8 87.89 74.03 11.82 1 3 2 Whitelist BOCA-UK 0.54 0.17 0 0 0.48 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 8 0.03 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 14 86144433 99141032 1 2 135 0 2 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 87.89 84.09 0 0 4 5 Whitelist BOCA-UK 0.54 0.7 NA 0 0.48 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 15 74454688 102262745 1 5 135 1 0 1 2 1 0.57 0.43 10 0 0 10 4 5 11 5 6 87.89 84.5 0 0 6 4 Whitelist BOCA-UK 0.62 0.68 0 0 0.64 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 9 0.03 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 16 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 17 5021570 64101991 8 15 135 1 1 4 2 7 0.39 0 10 0 0 10 3 6 13 3 6 87.89 55.24 44.76 0 2 4 Whitelist BOCA-UK 13 0.93 0 0 0 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 23 0.09 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 18 10626 37221352 2 2 135 0 0 1 1 0 0.57 1 5 0 0 5 4 5 6 4 4 87.89 93.71 1.13 0 3 4 Whitelist BOCA-UK 0.68 1 0 0 0.64 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 19 38970283 39083156 1 2 135 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA 4 3 3 87.89 92.36 0 0 4 5 Whitelist BOCA-UK 0.68 1 NA 0 0.64 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 20 49611238 49980643 1 1 135 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 87.89 99.03 0 0 4 NA Whitelist BOCA-UK 0.62 0.63 NA NA 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 2 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 21 25493177 41098740 1 11 135 1 3 0 1 6 0.28 0 12 0 0 12 5 6 15 5 8 87.89 77 0 0 8 3 Whitelist BOCA-UK 9 0.87 0 0 0 0.59 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 16 0.06 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 22 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 0 0 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691212 X 112172752 112720848 2 2 135 1 0 0 1 0 0.57 0.03 2 0 0 NA NA NA 18 3 5 87.89 95.5 4.27 0 2 6 Whitelist BOCA-UK 0.68 0.1 0 0 0.64 0 No BOCA-UK CGP_donor_1691212 BOCA 0.74 4 Bone-Osteosarc NA 4 0.01 NA 4 BOCA-UK DO52598 CGP_donor_1691212 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 1 174952780 174996591 1 1 596 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 3 4 68.66 99.94 0.06 0 4 6 Whitelist BOCA-UK 0.62 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 2 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 2 12275238 156576105 1 8 596 1 3 0 0 4 0.11 0 10 0 0 10 3 7 11 4 8 68.66 87.15 12.76 0 4 2 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 12 0.01 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 3 79642271 82952003 9 15 596 1 2 4 2 6 0.55 1 11 0 0 11 3 8 33 6 6 68.66 41.7 54.81 3 2 0 Whitelist BOCA-UK 11_12 0.99 1 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 24 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 4 57215180 77754049 1 14 596 4 2 0 0 8 0.06 0 17 0 0 17 12 14 22 12 14 68.66 88.44 11.45 2 3 4 Whitelist BOCA-UK 12 0.49 0.02 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc After polyploidization 20 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 5 NA NA 0 0 596 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 6 45114059 65575689 2 8 596 1 1 1 1 4 1 0.44 14 0 0 14 4 9 36 4 4 68.66 17.56 82.29 1 5 6 Whitelist BOCA-UK 0.87 0.69 0 0 1 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 12 0.01 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 7 29695609 35842411 1 2 596 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 68.66 99.68 0.08 5 4 2 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 8 98131760 131862131 10 54 596 1 2 3 4 44 0.57 0 53 0 0 53 6 6 67 6 6 68.66 88.28 8.3 7 6 5 Whitelist BOCA-UK 12 0.93 0 0 0 0.64 1 Low confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 64 0.05 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 9 NA NA 0 0 596 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 10 104364960 104413207 3 3 596 1 1 0 1 0 0.8 0 5 0 0 5 5 5 8 6 6 68.66 12.72 87.1 0 2 3 Whitelist BOCA-UK 0.87 0.01 0 0 0.84 1 Linked to low confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc Canonical without polyploidization 6 0.01 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 11 25558833 42430376 4 26 596 1 2 1 0 22 0.57 0 25 0 0 25 9 13 53 11 11 68.66 82.23 13.7 0 4 2 Whitelist BOCA-UK 12_19_8 0.62 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 30 0.03 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 12 38831735 119704559 111 234 596 22 26 34 29 123 0.43 0 232 0 0 232 5 8 238 8 8 68.66 50.74 49.18 96 2 3 Whitelist BOCA-UK 11_13_4_8 0.81 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 345 0.29 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 13 24259765 79982210 1 9 596 1 0 2 1 5 0.57 0.37 11 0 0 11 9 11 14 10 10 68.66 99.94 0.06 0 3 4 Whitelist BOCA-UK 12_4 0.85 0.62 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc After polyploidization 13 0.01 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 14 52970916 68207998 1 2 596 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 4 3 4 68.66 99.1 0 0 4 6 Whitelist BOCA-UK 0.68 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 4 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 15 65203302 87715328 4 20 596 1 3 0 0 16 0.11 0 15 0 0 15 3 5 47 8 8 68.66 59.49 40.42 4 6 4 Whitelist BOCA-UK 12 0.62 0 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 24 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 16 4989225 89024640 1 20 596 1 2 0 2 15 0.53 0.05 18 0 0 18 4 4 18 4 4 68.66 54.03 41.19 3 2 4 Whitelist BOCA-UK 12_8 0.96 0.17 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 25 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 17 11128144 68285285 31 108 596 11 8 5 7 77 0.49 0 98 0 0 98 4 10 113 4 10 68.66 85.42 9.34 1 34 35 Whitelist BOCA-UK 10_19_8 0.97 0 0 0 0.64 1 Low confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 139 0.12 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 18 50972531 51124381 1 1 596 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 68.66 0 99.13 0 2 NA Whitelist BOCA-UK 0.62 0 NA NA 0.59 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 2 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 19 7659219 23705867 5 23 596 2 2 1 0 18 0.53 0 34 0 0 34 5 16 36 5 5 68.66 27.61 72.22 6 6 8 Whitelist BOCA-UK 11 0.68 0 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 28 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 20 NA NA 0 0 596 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.03 0 NA NA 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 21 NA NA 0 0 596 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.33 0 NA NA 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 22 NA NA 0 0 596 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.99 0 NA NA 1 No BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691213 X 65039751 86137975 3 18 596 1 3 1 1 12 0.57 0.57 16 0 0 16 3 7 28 4 7 68.66 62.48 34.08 7 3 2 Whitelist BOCA-UK 11_8 0.68 0.8 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691213 BOCA 0.87 3.53 Bone-Osteosarc With other complex events 24 0.02 NA 2 BOCA-UK DO52599 CGP_donor_1691213 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 1 155935299 166050473 14 15 652 7 0 2 5 1 0.04 0.05 19 0 0 19 6 6 75 6 6 74.85 84.19 12.81 0 1 4 Whitelist BOCA-UK 0.54 0.16 0 0 0.41 1 Low confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 29 0.02 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 2 11400 232123609 20 60 652 5 5 4 6 40 0.94 0.01 70 0 0 70 6 9 73 6 10 74.85 74.29 25.61 0 3 4 Whitelist BOCA-UK 1_14_3_X 0.68 0.04 0 0 0.96 1 Low confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 80 0.06 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 3 29117586 189128945 10 84 652 2 2 3 3 74 0.94 0 82 0 0 82 7 17 84 7 8 74.85 72.04 24.46 1 2 3 Whitelist BOCA-UK 1_13_18_X 0.62 0 0 0 0.96 1 High confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 94 0.07 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 4 15590720 180978684 2 43 652 2 0 0 0 41 0.11 0.18 39 0 0 39 4 8 49 4 8 74.85 56.8 42.96 12 4 2 Whitelist BOCA-UK 2_3_X 0.91 0.4 0 0 0.48 1 Linked to high confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 45 0.03 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 5 165236546 166056717 2 2 652 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 13 3 5 74.85 91.13 6.21 0 4 1 Whitelist BOCA-UK 0.54 0 0 0 0.48 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 4 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 6 9055767 19690465 4 21 652 0 1 2 1 17 0.57 0 23 0 0 23 4 6 68 4 9 74.85 99.73 0.12 2 4 5 Whitelist BOCA-UK X 0.76 0 0 0 0.64 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 25 0.02 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 7 20100272 146941864 1 10 652 3 0 0 1 6 0.11 0 15 0 0 15 4 8 19 5 10 74.85 97.41 0.2 0 3 4 Whitelist BOCA-UK 2_X 0.86 0 0 0 0.48 1 Linked to low confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 14 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 8 115617207 117758121 2 5 652 0 0 1 1 3 0.57 0.21 4 0 0 4 3 4 40 7 8 74.85 82.61 13.89 0 5 3 Whitelist BOCA-UK 0.68 0.44 0 0 0.64 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 7 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 9 31495917 31631176 1 3 652 0 1 0 0 2 0.39 0.02 2 0 0 NA NA NA 12 5 5 74.85 75.31 22.16 0 3 4 Whitelist BOCA-UK 0.62 0.08 0 0 0.59 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 4 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 10 325730 114451376 1 23 652 3 0 1 0 19 0.11 0.78 22 0 0 22 3 5 29 5 5 74.85 47.37 49.19 3 3 4 Whitelist BOCA-UK 18_X 0.86 0.93 0 0 0.48 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 27 0.02 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 11 NA NA 0 0 652 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 0 NA NA 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 12 101282457 105490288 3 9 652 1 0 1 1 6 0.8 0.09 8 0 0 8 3 6 30 5 11 74.85 95.54 0.19 0 3 5 Whitelist BOCA-UK 13_14 0.85 0.26 0 0 0.84 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 12 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 13 33323085 107534872 2 15 652 1 0 1 2 11 0.57 0.39 29 0 0 29 9 11 31 9 11 74.85 83.32 13.9 0 3 5 Whitelist BOCA-UK 3 0.68 0.64 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 19 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 14 41964680 78837998 3 6 652 1 1 0 1 3 0.8 0.43 10 0 0 10 5 9 32 8 13 74.85 78.73 17.57 0 3 2 Whitelist BOCA-UK 0.62 0.68 0 0 0.84 1 Linked to high confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 9 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 15 67675284 67998602 1 1 652 1 0 0 0 0 0.39 0.19 2 0 NA NA NA NA 12 4 4 74.85 32.27 62.95 0 1 2 Whitelist BOCA-UK 0.62 0.41 0 NA 0.59 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 2 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 16 NA NA 0 0 652 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 17 7569041 59519093 2 3 652 1 0 0 1 1 0.57 0 2 0 0 NA NA NA 4 0 3 74.85 98.88 0 0 1 4 Whitelist BOCA-UK 0.87 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 5 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 18 5480934 11055617 3 33 652 1 1 0 1 30 0.8 0 20 0 0 20 4 10 44 9 14 74.85 95.18 0 1 5 4 Whitelist BOCA-UK 3_X 0.87 0 0 0 0.84 1 Linked to high confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 36 0.03 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 19 7749343 16728218 1 21 652 0 0 1 1 19 0.57 0 15 0 0 15 3 4 21 3 5 74.85 67.36 24.24 1 5 4 Whitelist BOCA-UK 1_3_X 0.68 0.01 0 0 0.64 1 Linked to high confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 23 0.02 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 20 12496567 15742459 2 12 652 0 0 2 0 10 0.11 0 17 0 0 17 3 6 33 3 11 74.85 86.55 12.47 0 3 5 Whitelist BOCA-UK 18 0.62 0 0 0 0.48 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 14 0.01 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 21 NA NA 0 0 652 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 0 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 22 33193479 33241751 1 2 652 0 0 0 1 1 0.39 0 2 0 NA NA NA NA 42 5 7 74.85 48.02 40.87 10 2 19 Whitelist BOCA-UK 0.68 0 0 NA 0.59 1 No BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc NA 3 0 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691214 X 48348455 150018347 98 229 652 24 27 19 28 131 0.57 0 166 0 0 166 7 8 177 7 8 74.85 64.6 34.98 39 2 8 Whitelist BOCA-UK 14_18_2_3 0.84 0 0 0 0.64 1 High confidence BOCA-UK CGP_donor_1691214 BOCA 0.49 3.33 Bone-Osteosarc With other complex events 327 0.25 NA 3 BOCA-UK DO52600 CGP_donor_1691214 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 1 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 2 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 3 NA NA 0 0 166 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 4 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 5 NA NA 0 0 166 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0 NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 6 45383288 45462058 1 1 166 0 1 0 0 0 0.39 0.02 2 0 0 NA NA NA NA NA NA 2.49 0.04 99.81 0 2 3 Whitelist BOCA-UK 0.62 0.08 0 0 0.59 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 2 0.01 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 7 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 8 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 9 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 10 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 11 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 12 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 13 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 14 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 15 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 16 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 17 54416 80744029 158 158 166 40 44 34 40 0 0.73 0 73 0 0 73 37 73 73 37 37 2.49 24.82 74.56 0 2 1 Whitelist BOCA-UK 0.84 0 0 0 0.81 1 High confidence BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc With other complex events 316 0.95 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 18 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 19 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 20 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 21 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 22 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691215 X NA NA 0 0 166 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.02 NA NA NA 1 No BOCA-UK CGP_donor_1691215 BOCA 0.4 2.01 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52601 CGP_donor_1691215 female C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 1 165838124 176108010 3 4 109 0 1 1 1 1 0.8 0.03 5 0 0 5 3 3 13 6 6 32.03 42.28 57.72 0 3 4 Whitelist BOCA-UK 1 0.11 0 0 0.84 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 7 0.03 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 2 185122801 196555933 3 3 109 1 1 1 0 0 0.8 0.3 6 0 0 6 3 4 11 4 5 32.03 30.36 69.53 0 3 1 Whitelist BOCA-UK 0.87 0.55 0 0 0.84 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 6 0.03 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 3 116375107 168509320 1 3 109 1 1 0 0 1 0.57 0.26 2 0 0 NA NA NA 4 3 3 32.03 85.38 14.5 0 0 1 Whitelist BOCA-UK 0.62 0.5 0 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 5 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 4 19841821 29159274 3 3 109 1 0 1 1 0 0.8 0.45 1 0 0 NA NA NA 9 6 6 32.03 9.68 90.3 0 2 NA Whitelist BOCA-UK 0.87 0.69 0 0 0.84 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 6 0.03 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 5 30295897 51277333 1 2 109 1 1 0 0 0 0.57 0.07 3 NA 0 NA NA NA NA NA NA 32.03 0.02 99.86 0 2 3 Whitelist BOCA-UK 0.68 0.21 NA 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 6 41478542 47655474 11 11 109 4 5 1 1 0 0.2 0.01 6 0 0 6 3 5 10 3 5 32.03 99.86 0 0 7 5 Whitelist BOCA-UK 0.62 0.03 0 0 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 22 0.1 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 7 48674128 147105514 1 5 109 4 1 0 0 0 0.04 1 7 0 0 7 5 7 7 5 5 32.03 0.65 99.12 0 2 1 Whitelist BOCA-UK 0.45 1 0 0 0.36 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 10 0.05 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 8 130611541 131486364 2 2 109 1 0 1 0 0 0.57 1 4 0 0 4 4 4 8 8 8 32.03 4.05 95.94 0 2 3 Whitelist BOCA-UK 0.68 1 0 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 9 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 10 24700327 115176074 1 2 109 0 2 0 0 0 0.11 1 4 0 0 4 0 4 5 3 5 32.03 66.48 33.35 5 1 2 Whitelist BOCA-UK 0.54 1 0 0 0.48 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 11 NA NA 0 0 109 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.49 NA NA NA 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 12 48210527 73375789 13 13 109 2 3 4 4 0 0.84 0 14 0 0 14 3 3 18 4 4 32.03 62.7 33.56 2 1 6 Whitelist BOCA-UK 0.9 0 0 0 0.88 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 26 0.12 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 13 94333571 94383031 1 1 109 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 32.03 0 85.85 0 2 NA Whitelist BOCA-UK 0.62 0.41 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 14 73883049 74551865 1 1 109 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 4 4 4 32.03 1.57 83.43 0 1 2 Whitelist BOCA-UK 0.62 0.93 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 15 100184673 100210367 1 1 109 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 32.03 0 84.59 0 2 NA Whitelist BOCA-UK 0.62 0.63 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 16 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 17 7499328 64321101 1 2 109 1 1 0 0 0 0.57 0.77 2 0.01 0 NA NA NA NA NA NA 32.03 9.66 90.34 0 0 2 Whitelist BOCA-UK 0.68 0.93 0.01 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 18 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 0 0 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 19 46367342 46577432 2 2 109 0 0 1 1 0 0.57 0.06 3 0 0 NA NA NA NA NA NA 32.03 0.02 99.81 0 2 1 Whitelist BOCA-UK 0.68 0.2 0 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 20 32251922 32361106 1 1 109 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 32.03 0 99.03 0 2 NA Whitelist BOCA-UK 0.62 0.91 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 21 25746643 32378278 2 2 109 0 1 1 0 0 0.57 0 4 0 0 4 0 4 7 4 7 32.03 45.95 31.4 0 3 2 Whitelist BOCA-UK 0.68 0 0 0 0.64 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 4 0.02 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 22 35945135 36089883 1 1 109 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.03 0.28 75.94 0 2 3 Whitelist BOCA-UK 0.62 1 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691216 X 51349653 53147020 1 1 109 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 32.03 100 0 0 1 NA Whitelist BOCA-UK 0.62 0.15 NA NA 0.59 0 No BOCA-UK CGP_donor_1691216 BOCA 0.19 1.77 Bone-Osteosarc NA 2 0.01 NA 1 BOCA-UK DO52602 CGP_donor_1691216 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 1 16413063 239876527 1 10 380 1 9 0 0 0 0 0 19 0 0 19 5 6 20 6 6 68.27 65.52 34.48 0 4 5 Whitelist BOCA-UK 0.01 0 0 0 0.01 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 20 0.03 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 2 59017074 241406602 9 17 380 1 3 2 3 8 0.75 0.71 40 0 0 40 14 40 41 14 14 68.27 74.42 25.48 6 3 2 Whitelist BOCA-UK 11_19 0.62 0.9 0 0 0.83 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 26 0.03 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA False positive; manually removed BOCA-UK::CGP_donor_1691217 3 48442808 178196799 1 8 380 1 6 0 0 1 0 0 13 0 0 13 6 7 16 7 7 68.27 41.4 58.44 0 3 2 Whitelist BOCA-UK 0.28 0 0 0 0.09 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 15 0.02 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 4 90398285 117066511 4 5 380 2 2 0 0 1 0.26 1 12 0 0 12 8 12 44 13 13 68.27 65.62 31.92 0 3 2 Whitelist BOCA-UK 0.68 1 0 0 0.59 0 Linked to high confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc Canonical without polyploidization 9 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 5 82186991 145068339 8 8 380 1 3 2 2 0 0.8 0.67 17 0 0 17 6 17 32 9 9 68.27 72.13 25.02 4 3 4 Whitelist BOCA-UK 0.87 0.87 0 0 0.84 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 16 0.02 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 6 109694663 128848927 6 21 380 2 6 2 2 9 0.26 0 26 0 0 26 5 8 50 8 8 68.27 93.33 3.7 0 3 4 Whitelist BOCA-UK 14_X 0.62 0.02 0 0 0.59 0 Low confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc With other complex events 33 0.04 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 7 148344121 148616012 2 2 380 0 1 1 0 0 0.57 0.05 2 0 0 NA NA NA 13 5 5 68.27 99.36 0.41 0 4 5 Whitelist BOCA-UK 0.68 0.17 0 0 0.64 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 4 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 8 24426572 139771115 1 6 380 1 3 0 0 2 0.11 0.01 14 0 0 14 4 12 15 5 5 68.27 47.73 52.27 0 3 4 Whitelist BOCA-UK 0.68 0.06 0 0 0.48 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 10 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 9 1150801 120900775 1 13 380 1 6 1 0 5 0.01 1 16 0 0 16 6 13 18 7 7 68.27 73.16 26.7 0 3 4 Whitelist BOCA-UK 17 0.54 1 0 0 0.21 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 21 0.03 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 10 13457669 111180611 1 8 380 1 6 0 0 1 0 0.02 15 0 0 15 5 15 16 6 6 68.27 39.08 57.48 0 2 3 Whitelist BOCA-UK 0.06 0.08 0 0 0.09 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 15 0.02 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 11 819052 86320878 1 16 380 3 11 0 0 2 0 0.71 25 0 0 25 14 25 27 15 15 68.27 51.21 45.16 0 3 4 Whitelist BOCA-UK 2 0.01 0.9 0 0 0.01 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 30 0.04 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 12 41613930 93848452 1 4 380 0 4 0 0 0 0.01 0 6 0 0 6 4 6 9 6 6 68.27 74.5 21.46 1 3 4 Whitelist BOCA-UK 0.21 0 0 0 0.16 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 8 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 13 20312035 47194343 32 39 380 6 7 10 9 7 0.74 0 56 0 0 56 12 18 60 12 18 68.27 78.57 21.43 10 2 4 Whitelist BOCA-UK 4_6 0.68 0 0 0 0.82 0 High confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc With other complex events 71 0.09 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 14 27063592 79165066 1 7 380 1 5 0 1 0 0.04 0.88 12 0 0 12 9 10 16 9 9 68.27 99.09 0 0 4 3 Whitelist BOCA-UK 0.47 1 0 0 0.38 0 Linked to low confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc After polyploidization 14 0.02 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 15 96688485 100046053 2 9 380 0 1 1 2 5 0.57 0.27 9 0 0 9 4 9 15 8 8 68.27 44.13 55.78 0 4 3 Whitelist BOCA-UK 2_4 0.85 0.51 0 0 0.64 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 13 0.02 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 16 8918968 33950905 5 15 380 3 1 1 0 10 0.28 0 12 0 0 12 5 8 28 7 9 68.27 31.76 63.72 7 2 3 Whitelist BOCA-UK 0.93 0 0 0 0.59 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 20 0.03 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 17 461115 73256983 1 13 380 0 6 1 2 4 0.03 0.02 21 0 0 21 8 8 25 8 9 68.27 79.13 20.82 1 3 4 Whitelist BOCA-UK 19 0.54 0.1 0 0 0.33 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 22 0.03 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 18 52737547 60252198 2 3 380 1 1 0 0 1 0.57 0.52 5 0 0 5 3 5 14 6 6 68.27 99.11 0 0 4 3 Whitelist BOCA-UK 0.62 0.76 0 0 0.64 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 5 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 19 43092652 56632954 3 8 380 2 0 0 1 5 0.3 0 10 0 0 10 7 7 28 7 8 68.27 85.23 5.61 0 4 2 Whitelist BOCA-UK 17 0.87 0 0 0 0.59 0 Linked to high confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc Before polyploidization 11 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA False positive; manually removed BOCA-UK::CGP_donor_1691217 20 4081996 49150079 1 3 380 1 2 0 0 0 0.3 0.86 7 0 0 7 5 7 10 6 6 68.27 98.85 0.86 0 3 4 Whitelist BOCA-UK 0.62 0.99 0 0 0.59 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 6 0.01 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 21 NA NA 0 0 380 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.27 NA NA NA 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 22 NA NA 0 0 380 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.59 NA NA NA 0 No BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc NA 0 0 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1691217 X 88486379 153095441 28 38 380 7 7 6 8 10 0.96 0 29 0 0 29 9 11 43 12 14 68.27 85.66 11.06 4 2 1 Whitelist BOCA-UK 19_6 0.73 0 0 0 0.98 0 High confidence BOCA-UK CGP_donor_1691217 BOCA 0.53 2.89 Bone-Osteosarc With other complex events 66 0.09 NA 2 BOCA-UK DO52603 CGP_donor_1691217 male C41.9 NA NA NA NA Included Bone-Osteosarc BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 1 98860574 222447283 1 2 59 2 0 0 0 0 0.11 0.33 4 NA 0 4 4 4 5 5 5 36.81 2.4 97.6 0 1 2 Whitelist BOCA-UK 0.54 0.58 NA 0 0.48 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 4 0.03 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 2 3884459 8046559 1 1 59 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA 4 3 3 36.81 30.3 69.61 0 3 4 Whitelist BOCA-UK 0.62 0.19 NA NA 0.59 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 2 0.02 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 3 NA NA 0 0 59 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.32 NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 4 129940116 140836957 1 2 59 1 0 1 0 0 0.57 0.44 2 NA 0 NA NA NA NA NA NA 36.81 5.7 94.29 0 1 2 Whitelist BOCA-UK 0.68 0.69 NA 0 0.64 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 4 0.03 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 5 17952364 18324623 1 1 59 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 36.81 0.21 99.67 0 1 2 Whitelist BOCA-UK 0.62 0.4 NA NA 0.59 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 2 0.02 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 6 NA NA 0 0 59 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.51 NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 7 104663908 151257900 1 2 59 1 1 0 0 0 0.57 0.77 3 NA 0 NA NA NA NA NA NA 36.81 99.77 0 0 3 4 Whitelist BOCA-UK 0.68 0.93 NA 0 0.64 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 4 0.03 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 8 14251324 137989315 1 2 59 1 1 0 0 0 0.57 0.77 3 NA 0 NA NA NA 4 3 3 36.81 1.14 98.85 0 2 3 Whitelist BOCA-UK 0.68 0.93 NA 0 0.64 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 4 0.03 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 9 21826816 22341291 1 1 59 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 36.81 99.79 0 0 0 1 Whitelist BOCA-UK 0.62 0.91 NA NA 0.59 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 2 0.02 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 11 66815140 66838981 1 1 59 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 36.81 0 99.45 0 2 NA Whitelist BOCA-UK 0.62 0.76 NA NA 0.59 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 2 0.02 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 12 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 16 46689644 89652038 32 33 59 6 5 9 12 1 0.29 0 24 0 0 24 24 24 26 24 24 36.81 35.65 63.48 0 1 2 Whitelist BOCA-UK 0.62 0 0 0 0.59 1 High confidence BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith Canonical without polyploidization 65 0.55 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 17 43050757 64036769 4 4 59 2 1 0 1 0 0.57 0 5 0 0 5 5 5 11 6 6 36.81 67.54 27.99 3 3 2 Whitelist BOCA-UK 0.68 0.01 0 0 0.64 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 8 0.07 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA NA NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 20 NA NA 0 0 59 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.62 NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 21 NA NA 0 0 59 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.76 NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 22 NA NA 0 0 59 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BOCA-UK NA 0.75 NA NA NA 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 0 0 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BOCA-UK::CGP_donor_1841267 X 27461400 118785670 1 4 59 3 1 0 0 0 0.11 0.54 7 0 0 7 7 7 8 8 8 36.81 5.2 94.57 1 2 1 Whitelist BOCA-UK 0.54 0.77 0 0 0.48 1 No BOCA-UK CGP_donor_1841267 BOCA 0.32 1.8 Bone-Epith NA 8 0.07 NA 2 BOCA-UK DO52604 CGP_donor_1841267 female C41.9 NA NA NA NA Included Bone-Epith BOCA UK 0 NA BRCA-EU::CGP_donor_1163904 1 100184086 102210388 1 1 21 0 0 0 1 0 0.39 0.23 2 0 NA NA NA NA 5 3 3 90.11 92.6 7.39 0 2 4 Whitelist BRCA-EU 0.62 0.46 0 NA 0.59 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 2 0.05 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 2 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 3 101403605 148419867 2 2 21 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 4 3 4 90.11 52.92 44 0 3 NA Whitelist BRCA-EU 0.68 0.18 0 0 0.64 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 4 0.1 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 4 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 5 33122088 40861386 2 2 21 0 0 1 1 0 0.57 0.14 4 0 0 4 4 4 8 8 8 90.11 99.87 0 0 3 4 Whitelist BRCA-EU 0.68 0.34 0 0 0.64 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 4 0.1 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 8 2385620 130550466 1 3 21 2 1 0 0 0 0.3 0.09 4 0.01 0 4 4 4 5 5 5 90.11 99.99 0 0 3 4 Whitelist BRCA-EU 0.62 0.25 0.01 0 0.59 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 6 0.14 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 9 NA NA 0 0 21 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.42 NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 12 96815618 96829166 1 1 21 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.11 99.98 0 0 4 NA Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 2 0.05 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 13 112524385 112574686 1 1 21 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 90.11 100 0 0 3 4 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 2 0.05 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 15 NA NA 0 0 21 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.69 NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 21 15250836 15270364 1 1 21 0 1 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 90.11 77.35 0 0 4 NA Whitelist BRCA-EU 0.62 0.46 NA NA 0.59 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 2 0.05 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1163904 X NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1163904 BRCA 0.39 3.69 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO217826 CGP_donor_1163904 female chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 1 207605111 207618206 1 1 6 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 15.31 42.36 57.64 0 4 NA Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 2 0.17 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 6 107502295 149914531 2 2 6 0 0 1 1 0 0.57 0 6 0 0 6 6 6 13 13 13 15.31 42.71 54.46 0 1 2 Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 4 0.33 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186987 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186987 BRCA 0.81 2.08 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217939 CGP_donor_1186987 female alive C50.2 radiation therapy unknown 47 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 9 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.35 NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA 9 3 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.37 NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 3 5 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 11 6 6 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1186990 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1186990 BRCA 0.21 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218173 CGP_donor_1186990 female alive C50.4 radiation therapy unknown 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.61 NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 4 90682525 91177112 1 1 5 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 19.51 0 99.78 0 2 NA Whitelist BRCA-EU 0.62 0.54 NA NA 0.59 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 2 0.2 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 5 NA NA 0 0 5 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.52 NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 9 2993335 109060523 2 2 5 1 1 0 0 0 0.57 0.01 3 NA 0.05 NA NA NA 4 3 3 19.51 13.29 86.55 0 2 1 Whitelist BRCA-EU 0.68 0.06 NA 0.05 0.64 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 4 0.4 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 19 44915289 44961979 1 1 5 0 0 1 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 19.51 0 99.83 0 2 NA Whitelist BRCA-EU 0.62 0.26 NA NA 0.59 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 2 0.2 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1187025 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1187025 BRCA 0.33 2.22 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220821 CGP_donor_1187025 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 1 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 2 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 3 90257088 136155604 2 7 46 0 0 0 2 5 0.11 0 8 0 0 8 4 5 14 8 10 15.09 28.86 67.95 0 1 2 Whitelist BRCA-EU 5 0.96 0 0 0 0.48 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 9 0.1 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 4 NA NA 0 0 46 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 5 59511516 77598572 1 5 46 1 0 0 1 3 0.57 0.01 5 0 0 5 5 5 10 7 7 15.09 11.81 88.05 1 2 1 Whitelist BRCA-EU 0.93 0.04 0 0 0.64 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 7 0.08 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 6 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 7 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 8 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 9 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 10 21406100 36902219 1 12 46 4 0 0 0 8 0.01 0 8 0 0 8 8 8 9 9 9 15.09 5.14 94.69 1 1 2 Whitelist BRCA-EU 11 0.68 0 0 0 0.16 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 16 0.17 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 11 63746935 70653884 5 12 46 0 1 2 2 7 0.53 0 6 0 0 6 6 6 6 6 6 15.09 48.71 50.86 0 1 2 Whitelist BRCA-EU 10 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 17 0.18 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 12 NA NA 0 0 46 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.19 NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 14 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 18 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 20 6768565 13809086 3 6 46 0 1 1 1 3 0.8 0 4 0 0 4 4 4 10 10 10 15.09 30.18 62.61 0 1 2 Whitelist BRCA-EU 0.93 0 0 0 0.84 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 9 0.1 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230754 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230754 BRCA 0.59 2.01 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218065 CGP_donor_1230754 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 1 16076342 181848576 1 19 54 0 1 1 2 15 0.57 0 14 0 0 14 7 8 14 7 8 18.12 44.7 55.3 0 2 4 Whitelist BRCA-EU 5_6_8 0.68 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA With other complex events 23 0.21 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 2 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 3 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 4 170880708 171294352 1 1 54 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 18.12 0.22 99.77 0 1 2 Whitelist BRCA-EU 0.62 0.51 NA NA 0.59 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 5 31942233 93707021 3 9 54 1 1 0 1 6 0.8 0 7 0 0 7 7 7 7 7 7 18.12 3.99 95.88 0 2 1 Whitelist BRCA-EU 1 0.97 0 0 0 0.84 1 High confidence BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA Canonical without polyploidization 12 0.11 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 6 21024781 109641658 2 11 54 1 0 1 0 9 0.57 0 8 0 0 8 4 4 10 5 5 18.12 4.77 95.09 0 1 2 Whitelist BRCA-EU 1_8 0.54 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA With other complex events 13 0.12 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 7 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 8 17274088 43561752 5 15 54 2 1 1 1 10 0.9 0 12 0 0 12 7 12 15 7 13 18.12 69.12 27.27 17 2 1 Whitelist BRCA-EU 1_6 0.85 0 0 0 0.92 1 High confidence BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA With other complex events 20 0.19 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 9 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 10 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 11 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 12 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 13 NA NA 0 0 54 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.3 NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 14 NA NA 0 0 54 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.89 NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 16 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 17 NA NA 0 0 54 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.18 NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 18 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 19 NA NA 0 0 54 0 0 0 0 0 NA 0 NA 0.02 NA NA NA NA 8 7 7 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 0.02 NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230755 X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1230755 BRCA 0.48 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO220822 CGP_donor_1230755 female alive other therapy 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 1 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 3 176180697 178853339 6 6 12 2 1 0 3 0 0.34 0 1 0 0 NA NA NA NA NA NA 5.23 0 99.88 0 2 NA Whitelist BRCA-EU 0.62 0 0 0 0.59 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 12 0.5 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 7 141765444 141794359 1 1 12 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 5.23 0 99.78 0 2 NA Whitelist BRCA-EU 0.62 0.73 NA NA 0.59 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 2 0.08 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 10 97321741 97362666 1 1 12 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 5.23 0 99.82 0 2 NA Whitelist BRCA-EU 0.62 0.27 NA NA 0.59 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 2 0.08 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230796 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230796 BRCA 0.53 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217908 CGP_donor_1230796 female alive radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 1 153759459 183440338 1 1 1 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 6 4 4 94.39 100 0 0 6 7 Whitelist BRCA-EU 0.62 0.23 NA NA 0.59 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 2 1 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1230797 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1230797 BRCA 0.43 3.96 Breast-AdenoCA NA 0 0 NA 6 BRCA-EU DO218121 CGP_donor_1230797 female alive radiation therapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1232859 1 230927936 241405758 2 3 316 1 0 0 1 1 0.57 0.25 3 0 0 NA NA NA 16 4 7 28.05 26.78 73.22 0 2 1 Whitelist BRCA-EU 8 0.87 0.49 0 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 2 3654716 4013178 1 1 316 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 28.05 0.15 99.75 0 2 3 Whitelist BRCA-EU 0.62 0 NA NA 0.59 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 2 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 3 10915084 85721851 1 4 316 1 0 0 1 2 0.57 0 4 0 0 4 3 4 8 5 7 28.05 65.42 34.58 0 2 0 Whitelist BRCA-EU 8 0.68 0.01 0 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 4 33980457 153465409 1 2 316 0 2 0 0 0 0.11 0 5 0 0 5 5 5 5 5 5 28.05 0.1 99.88 2 2 3 Whitelist BRCA-EU 0.54 0 0 0 0.48 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 5 NA NA 0 0 316 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 6 56201574 162603780 22 38 316 7 7 4 4 16 0.65 0 31 0 0 31 9 12 35 9 11 28.05 41.1 58.76 3 2 1 Whitelist BRCA-EU 20 0.88 0 0 0 0.73 0 High confidence BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA With other complex events 60 0.09 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 7 6203495 45034056 1 4 316 1 1 0 0 2 0.57 0.01 6 0 0 6 4 5 10 5 8 28.05 27.28 72.49 0 2 3 Whitelist BRCA-EU 8 1 0.04 0 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 8 91550520 101047671 8 11 316 0 1 3 4 3 0.17 0 12 0 0 12 7 12 41 9 9 28.05 98.54 1.35 0 4 5 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 19 0.03 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 False positive; manually removed BRCA-EU::CGP_donor_1232859 9 3042476 18388111 1 2 316 0 1 1 0 0 0.57 0.01 4 0.15 0 4 4 4 6 6 6 28.05 33.23 63.56 0 1 2 Whitelist BRCA-EU 0.68 0.06 0.15 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 10 63194365 69438684 3 3 316 1 1 0 1 0 0.8 0.18 4 0 0 4 4 4 13 11 11 28.05 25.19 71.23 0 1 2 Whitelist BRCA-EU 0.87 0.39 0 0 0.84 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 11 68987281 88452236 24 73 316 7 5 7 5 49 0.88 0 82 0 0 82 4 8 97 4 4 28.05 61.16 38.42 3 4 3 Whitelist BRCA-EU 6_20 0.87 0 0 0 0.91 0 Low confidence BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA With other complex events 97 0.15 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 12 50134439 83407108 14 16 316 3 4 3 4 2 0.96 0.02 18 0 0 18 5 9 20 5 5 28.05 64.29 35.63 0 3 2 Whitelist BRCA-EU 0.95 0.09 0 0 0.98 0 Low confidence BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA With other complex events 30 0.05 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 13 56683727 57323956 1 1 316 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 28.05 0.56 99.44 0 2 3 Whitelist BRCA-EU 0.62 0.02 NA NA 0.59 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 2 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 14 NA NA 0 0 316 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 15 NA NA 0 0 316 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.02 NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 16 85254554 86794953 3 4 316 1 1 1 0 1 0.8 0.11 6 0 0 6 3 4 17 3 4 28.05 24.51 75.39 1 1 6 Whitelist BRCA-EU 1 0.29 0 0 0.84 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 7 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 17 51283840 71136111 4 5 316 2 1 0 1 1 0.57 0.38 7 0 0 7 7 7 11 10 10 28.05 43.44 56.28 15 4 3 Whitelist BRCA-EU 0.62 0.63 0 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 9 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 18 NA NA 0 0 316 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 19 NA NA 0 0 316 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 20 33258582 62543745 71 130 316 21 14 18 18 59 0.71 0 145 0 0 145 5 10 149 5 10 28.05 99.05 0.16 3 7 4 Whitelist BRCA-EU 6_12 0.68 0 0 0 0.78 0 Low confidence BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA With other complex events 201 0.32 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 21 25173277 34792646 1 2 316 0 0 1 1 0 0.57 0.8 4 0 0 4 3 4 8 3 3 28.05 32.85 44.56 0 2 1 Whitelist BRCA-EU 0.68 0.95 0 0 0.64 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 22 17299138 26524747 1 2 316 0 1 0 0 1 0.39 0.29 2 0 NA NA NA NA 5 4 5 28.05 72.18 27.82 0 1 3 Whitelist BRCA-EU 0.68 0.53 0 NA 0.59 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 3 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1232859 X NA NA 0 0 316 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1232859 BRCA 0.54 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218742 CGP_donor_1232859 female deceased other therapy 45 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1234120 1 44414300 194729546 1 12 344 4 2 0 0 6 0.06 0.76 10 0 0 10 9 10 17 12 12 62.56 77.93 22.07 0 3 2 Whitelist BRCA-EU 7 0.62 0.93 0 0 0.48 1 Linked to low confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA Canonical without polyploidization 18 0.03 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 2 81269370 219407097 1 11 344 2 2 1 0 6 0.53 0.03 15 0 0 15 8 13 21 8 8 62.56 35.99 63.91 0 3 2 Whitelist BRCA-EU 0.74 0.12 0 0 0.64 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 16 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 3 70654738 73868630 6 6 344 1 3 1 1 0 0.57 0.4 2 0 0 NA NA NA 19 5 5 62.56 63.51 33.32 1 3 4 Whitelist BRCA-EU 0.68 0.64 0 0 0.64 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 12 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 4 53312523 80369667 13 18 344 2 3 4 4 5 0.84 0 29 0 0 29 7 7 39 7 7 62.56 86.53 13.45 0 4 5 Whitelist BRCA-EU 0.99 0.01 0 0 0.88 1 High confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 31 0.05 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 5 27117220 142566044 15 23 344 7 4 2 2 8 0.22 0 32 0 0 32 4 7 44 5 8 62.56 96.59 0.71 4 6 7 Whitelist BRCA-EU 11 0.79 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 38 0.06 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 6 50040060 103458045 1 10 344 2 0 0 1 7 0.3 0.65 10 0 0 10 3 8 15 4 9 62.56 41.82 55.35 0 1 4 Whitelist BRCA-EU 0.62 0.86 0 0 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 13 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 7 108549083 153423652 20 24 344 3 8 6 3 4 0.31 0 22 0 0 22 5 7 37 5 7 62.56 71.76 25.6 3 3 2 Whitelist BRCA-EU 0.83 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 44 0.06 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 8 17297986 132094568 1 23 344 4 0 0 1 18 0.04 0.05 21 0 0 21 4 12 22 4 4 62.56 99.12 0.87 3 4 3 Whitelist BRCA-EU 4 0.41 0.16 0 0 0.36 1 Linked to high confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 28 0.04 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 9 457048 105076933 1 10 344 5 0 0 0 5 0 0.48 10 0 0 10 3 7 15 4 4 62.56 54.37 42.53 0 2 1 Whitelist BRCA-EU 2 0.54 0.73 0 0 0.07 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 15 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 10 37337184 112584327 1 5 344 1 1 0 0 3 0.57 0.25 5 0 0 5 3 5 12 4 4 62.56 48.58 47.71 0 2 1 Whitelist BRCA-EU 0.62 0.49 0 0 0.64 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 7 0.01 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 11 62942614 98446662 1 10 344 3 1 0 0 6 0.11 0.05 15 0 0 15 6 11 27 10 10 62.56 48.02 48.09 0 3 4 Whitelist BRCA-EU 5 0.86 0.17 0 0 0.48 1 Linked to low confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 14 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 12 41053641 100777239 1 11 344 1 1 0 0 9 0.57 0.2 10 0 0 10 4 5 11 4 5 62.56 68.55 31.37 0 3 4 Whitelist BRCA-EU 0.87 0.43 0 0 0.64 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 13 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 13 25516120 72410625 1 8 344 2 1 0 0 5 0.3 0.55 6 0 0 6 3 4 8 4 5 62.56 74.88 25.12 0 1 3 Whitelist BRCA-EU 0.68 0.78 0 0 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 11 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 14 24801053 53663407 5 8 344 1 2 2 0 3 0.53 0.88 17 0 0 17 7 15 21 7 7 62.56 27.6 68.69 4 2 3 Whitelist BRCA-EU 0.62 1 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 13 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 15 59922904 101226389 18 20 344 4 7 4 3 2 0.57 0 18 0 0 18 4 6 18 4 6 62.56 99.77 0.13 0 3 4 Whitelist BRCA-EU 0.66 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA With other complex events 38 0.06 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 16 3122189 3134431 1 1 344 1 0 0 0 0 0.39 0.09 1 0.06 NA NA NA NA 5 3 3 62.56 51.36 43.47 0 3 NA Whitelist BRCA-EU 0.62 0.25 0.06 NA 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 2 0 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 17 11652940 12283470 2 2 344 1 1 0 0 0 0.57 0 4 0 0 4 3 4 27 6 7 62.56 90.16 5.28 0 1 0 Whitelist BRCA-EU 0.68 0 0 0 0.64 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 4 0.01 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 18 14572166 24490672 1 1 344 0 1 0 0 0 0.39 0.09 3 0 NA NA NA NA 6 4 5 62.56 41.14 53.16 0 2 3 Whitelist BRCA-EU 0.62 0.25 0 NA 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 2 0 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 19 2559005 43710047 1 13 344 3 0 0 1 9 0.11 0 13 0 0 13 3 8 15 3 4 62.56 74.27 25.56 1 3 4 Whitelist BRCA-EU 0.68 0 0 0 0.48 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 17 0.02 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 20 32025909 32055168 1 1 344 1 0 0 0 0 0.39 0.85 2 0 NA NA NA NA 7 4 5 62.56 99.03 0 0 1 3 Whitelist BRCA-EU 0.62 0.99 0 NA 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 2 0 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 21 19601051 42170266 3 7 344 0 1 1 1 4 0.8 0.01 5 0 0 5 3 5 5 3 5 62.56 30.36 39.93 0 3 2 Whitelist BRCA-EU 4 0.77 0.05 0 0 0.84 1 Linked to high confidence BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA Canonical without polyploidization 10 0.01 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 22 NA NA 0 0 344 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.43 NA NA NA 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 0 0 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234120 X 50213534 147018556 1 3 344 2 1 0 0 0 0.3 0.54 13 0 0 13 7 8 21 13 13 62.56 60.56 39.21 0 2 4 Whitelist BRCA-EU 0.62 0.77 0 0 0.59 1 No BRCA-EU CGP_donor_1234120 BRCA 0.39 2.94 Breast-LobularCA NA 6 0.01 stopgain,17_7578382_C_G,CN:3 5 BRCA-EU DO218269 CGP_donor_1234120 female alive C50.4 radiation therapy unknown 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 1 NA NA 0 0 149 0 0 0 0 0 NA 0 NA NA NA NA NA NA 9 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 2 119489302 183533826 1 1 149 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 66.44 73.56 26.33 0 2 4 Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 3 85270590 86634714 3 4 149 1 1 0 1 1 0.8 1 2 0 0 NA NA NA 12 4 5 66.44 96.94 0 0 6 12 Whitelist BRCA-EU 0.68 1 0 0 0.84 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 4 NA NA 0 0 149 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 5 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 6 8393291 16499670 13 17 149 5 4 1 3 4 0.44 0 28 0 0 28 3 4 32 3 4 66.44 99.85 0 3 14 17 Whitelist BRCA-EU 18 0.62 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA With other complex events 30 0.1 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 7 37201530 147378535 25 27 149 4 9 5 7 2 0.5 0 44 0 0 44 4 7 45 4 5 66.44 86.23 11.22 7 6 3 Whitelist BRCA-EU 0.84 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA With other complex events 52 0.17 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 8 38069892 56753283 3 7 149 2 0 1 0 4 0.3 0.02 11 0 0 11 0 3 15 0 3 66.44 67.64 28.84 0 2 4 Whitelist BRCA-EU 11 0.62 0.09 0 0 0.59 1 Linked to low confidence BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA With other complex events 10 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 9 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 10 NA NA 0 0 149 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.21 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 11 63368164 108986358 20 33 149 5 3 7 5 13 0.66 0 37 0 0 37 5 7 40 5 7 66.44 99.57 0 0 4 7 Whitelist BRCA-EU 0.87 0 0 0 0.74 1 Low confidence BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA With other complex events 53 0.18 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 12 NA NA 0 0 149 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 11 10 10 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.3 0 NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 13 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 14 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 15 NA NA 0 0 149 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.33 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 16 83764286 83781918 1 2 149 1 0 0 0 1 0.39 0.45 2 NA NA NA NA NA NA NA NA 66.44 58.29 41.39 0 2 3 Whitelist BRCA-EU 0.54 0.69 NA NA 0.59 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 17 28224402 49284268 3 3 149 1 0 1 1 0 0.8 0.3 2 0 0 NA NA NA 4 4 4 66.44 42.98 57.02 0 2 4 Whitelist BRCA-EU 0.87 0.55 0 0 0.84 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 18 19776092 47210113 9 11 149 2 0 3 4 2 0.27 0 15 0 0 15 7 8 26 9 10 66.44 32.61 62.77 0 2 4 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA With other complex events 20 0.07 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 19 NA NA 0 0 149 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 20 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 21 NA NA 0 0 149 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 22 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234121 X NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234121 BRCA 0.4 3.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:2 3 BRCA-EU DO218502 CGP_donor_1234121 female alive C50.5 radiation therapy unknown 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 1 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 2 3892443 238924020 10 16 83 3 2 2 3 6 0.94 0 26 0 0 26 26 26 26 26 26 22.8 45.18 51.95 0 1 2 Whitelist BRCA-EU 0.79 0 0 0 0.96 1 High confidence BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA Canonical without polyploidization 26 0.16 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 3 191288247 191613125 1 1 83 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 22.8 0.16 99.72 0 1 2 Whitelist BRCA-EU 0.62 0.11 NA NA 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 4 NA NA 0 0 83 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.87 NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 5 166497857 166610894 1 1 83 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 22.8 0.06 99.81 0 1 2 Whitelist BRCA-EU 0.62 0.2 NA NA 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 6 NA NA 0 0 83 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.73 NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 7 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 8 131733080 131848289 1 1 83 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 22.8 0 99.99 0 2 NA Whitelist BRCA-EU 0.62 0.32 NA NA 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 9 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 10 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 11 60702782 76620693 26 27 83 9 3 6 8 1 0.36 0 11 0 0 11 3 5 17 7 7 22.8 36.42 63.06 1 2 3 Whitelist BRCA-EU 0.68 0 0 0 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 53 0.32 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 12 124252748 124310374 1 1 83 1 0 0 0 0 0.39 0.6 2 0 NA NA NA NA 5 3 3 22.8 3.63 96.29 0 2 4 Whitelist BRCA-EU 0.62 0.81 0 NA 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 13 43550621 73332841 1 7 83 1 0 2 0 4 0.3 0 8 0 0 8 8 8 17 17 17 22.8 31.95 68.05 0 1 2 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 10 0.06 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 14 21765367 70394123 2 6 83 0 1 0 1 4 0.57 0 3 0 0 NA NA NA 7 7 7 22.8 48.02 51.07 0 2 1 Whitelist BRCA-EU 13 0.93 0.01 0 0 0.64 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 8 0.05 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 15 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 16 NA NA 0 0 83 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.09 0 NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 17 6411986 12684293 2 2 83 0 1 0 1 0 0.57 0 11 0 0 11 7 11 20 9 9 22.8 36.35 59.2 0 1 0 Whitelist BRCA-EU 0.68 0 0 0 0.64 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 18 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 19 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 20 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 21 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 22 NA NA 0 0 83 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.5 NA NA NA 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234122 X 151150388 151244185 1 1 83 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 22.8 0.06 99.71 0 1 2 Whitelist BRCA-EU 0.62 0.32 NA NA 0.59 1 No BRCA-EU CGP_donor_1234122 BRCA 0.7 1.77 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218698 CGP_donor_1234122 female alive C50.1 radiation therapy unknown 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 1 101766772 111649270 5 9 29 0 2 1 2 4 0.53 0 15 0 0 15 10 13 18 10 13 16.69 76.84 23.16 9 1 4 Whitelist BRCA-EU 0.97 0 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA Before polyploidization 14 0.24 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 2 182818410 203984903 1 2 29 1 0 1 0 0 0.57 0.09 1 0 0 NA NA NA NA NA NA 16.69 0 99.89 6 2 NA Whitelist BRCA-EU 0.68 0.25 0 0 0.64 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 4 0.07 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 3 NA NA 0 0 29 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.7 NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 5 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 6 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 7 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 8 90126335 111420408 2 2 29 0 0 1 1 0 0.57 0.18 1 0 0 NA NA NA NA NA NA 16.69 0.17 99.82 1 2 NA Whitelist BRCA-EU 0.68 0.4 0 0 0.64 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 4 0.07 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 10 65298928 90587244 2 4 29 0 0 1 1 2 0.57 0 4 0 0 4 0 3 4 0 3 16.69 0.56 99.26 19 2 0 Whitelist BRCA-EU 0.68 0.01 0 0 0.64 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 6 0.1 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 11 38669275 38708489 2 2 29 0 0 1 1 0 0.57 0.39 1 NA 0 NA NA NA NA NA NA 16.69 0 99.57 0 2 NA Whitelist BRCA-EU 0.68 0.64 NA 0 0.64 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 4 0.07 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 12 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 22 NA NA 0 0 29 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234123 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234123 BRCA 0.35 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217844 CGP_donor_1234123 female alive C50.2/C50.4 radiation therapy unknown 47 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 1 16353677 153794553 17 17 95 2 2 7 6 0 0.18 0 24 0 0 24 7 13 26 7 13 68.58 93.35 3.68 0 1 2 Whitelist BRCA-EU 0.62 0.01 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA With other complex events 34 0.18 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 2 23018733 86416994 12 12 95 3 1 3 5 0 0.45 0.09 9 0 0 9 7 9 11 7 7 68.58 0.59 99.29 0 2 3 Whitelist BRCA-EU 0.68 0.25 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA Canonical without polyploidization 24 0.13 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 3 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 4 119669067 140882672 6 10 95 5 1 0 0 4 0.01 0.06 5 0 0 5 3 3 7 3 4 68.58 95.13 4.85 0 3 4 Whitelist BRCA-EU 0.54 0.2 0 0 0.19 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 16 0.08 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 5 78142043 78158769 1 1 95 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 68.58 99.88 0 0 3 NA Whitelist BRCA-EU 0.62 0.12 NA NA 0.59 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 6 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 7 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 8 NA NA 0 0 95 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 9 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 10 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 11 NA NA 0 0 95 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.58 NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 12 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 13 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 14 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 15 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 16 NA NA 0 0 95 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.15 0 NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 17 36804652 65070726 26 32 95 5 5 7 9 6 0.64 0 49 0 0 49 5 8 58 5 8 68.58 28.62 66.13 0 3 4 Whitelist BRCA-EU 0.95 0 0 0 0.71 1 Low confidence BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA With other complex events 58 0.31 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 18 NA NA 0 0 95 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 19 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 20 14054448 51465273 8 8 95 2 3 1 2 0 0.8 0 7 0 0 7 7 7 7 7 7 68.58 99.02 0 0 4 3 Whitelist BRCA-EU 0.87 0.01 0 0 0.84 1 High confidence BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA After polyploidization 16 0.08 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 21 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 22 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234124 X 37270704 37337116 1 1 95 0 1 0 0 0 0.39 0.64 2 NA NA NA NA NA 5 3 3 68.58 99.77 0 0 4 5 Whitelist BRCA-EU 0.62 0.85 NA NA 0.59 1 No BRCA-EU CGP_donor_1234124 BRCA 0.59 3 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218060 CGP_donor_1234124 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 1 37777141 144911276 1 1 28 1 0 0 0 0 0.39 1 3 NA NA NA NA NA 5 5 5 7.27 4.54 92.17 0 2 4 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 2 0.04 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 3 98870279 98925754 1 1 28 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 5 5 7.27 31.57 68.38 0 1 2 Whitelist BRCA-EU 0.62 0.9 NA NA 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 2 0.04 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 5 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 7 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 8 114365959 120234935 1 2 28 0 2 0 0 0 0.11 0.65 4 NA 0 4 3 4 5 3 3 7.27 4.01 95.98 0 3 2 Whitelist BRCA-EU 0.54 0.86 NA 0 0.48 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 4 0.07 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 13 111992082 112019152 1 1 28 1 0 0 0 0 0.39 0.63 2 NA NA NA NA NA NA NA NA 7.27 0.02 99.83 0 1 2 Whitelist BRCA-EU 0.62 0.84 NA NA 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 2 0.04 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 16 7915152 13893794 1 1 28 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 7.27 48.89 50.71 0 2 3 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 2 0.04 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 17 41410381 52002431 2 2 28 0 1 1 0 0 0.57 0 4 0 0 4 4 4 19 9 9 7.27 59.89 35.66 0 2 3 Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 4 0.07 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 19 3350521 15239262 3 4 28 1 0 0 2 1 0.3 0 5 0 0 5 4 5 16 4 6 7.27 36.8 55.66 0 2 3 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 7 0.12 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 20 52102636 60397306 1 5 28 1 0 0 0 4 0.39 0 7 0 0 7 6 7 9 7 7 7.27 13.48 85.55 0 1 2 Whitelist BRCA-EU 0.68 0 0 0 0.59 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 6 0.11 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1234129 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1234129 BRCA 0.64 1.99 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218059 CGP_donor_1234129 female alive C50.4 radiation therapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 1 810187 225230350 1 12 249 5 6 0 1 0 0.03 0.48 16 0 0 16 5 13 18 5 5 42.11 26.43 73.57 0 2 3 Whitelist BRCA-EU 0.45 0.72 0 0 0.36 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 24 0.05 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 2 180276094 180293733 3 5 249 1 1 1 0 2 0.8 0.65 2 0 0 NA NA NA 11 6 6 42.11 12.15 87.75 0 1 2 Whitelist BRCA-EU 0.68 0.86 0 0 0.84 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 3 45212587 76474176 8 8 249 2 1 2 3 0 0.8 0.01 5 0 0 5 3 4 18 3 5 42.11 50.64 49.24 0 1 2 Whitelist BRCA-EU 0.87 0.06 0 0 0.84 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 16 0.03 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 4 57932328 158974417 5 24 249 1 0 2 2 19 0.53 0 19 0 0 19 6 11 24 6 8 42.11 46.78 53.2 0 3 1 Whitelist BRCA-EU 18 0.87 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA With other complex events 29 0.06 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 5 65996591 180364194 2 4 249 0 2 1 1 0 0.57 0.6 12 0 0 12 5 7 15 8 8 42.11 33.14 66.74 0 2 3 Whitelist BRCA-EU 0.68 0.82 0 0 0.64 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 6 151792236 152568813 3 3 249 0 1 1 1 0 0.8 0.51 5 0 0 5 3 5 19 7 7 42.11 77.15 22.58 0 1 2 Whitelist BRCA-EU 0.87 0.75 0 0 0.84 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 7 26231170 132496542 2 8 249 0 0 2 2 4 0.26 0.58 14 0 0 14 5 8 15 5 6 42.11 37.02 62.76 0 2 3 Whitelist BRCA-EU 0.87 0.8 0 0 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 8 73051289 146104524 1 7 249 0 5 0 0 2 0 0.08 11 0 0 11 5 9 15 5 5 42.11 54.17 45.65 0 7 6 Whitelist BRCA-EU 0.47 0.23 0 0 0.07 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 9 120006532 128118338 1 3 249 1 1 0 0 1 0.57 0.03 2 0 0 NA NA NA 5 4 4 42.11 29.16 70.68 0 2 3 Whitelist BRCA-EU 0.87 0.11 0 0 0.64 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 10 20842502 53970426 1 11 249 2 1 0 0 8 0.3 0 6 0 0 6 3 6 10 4 4 42.11 37.67 62.16 0 1 2 Whitelist BRCA-EU 18_4 0.74 0 0 0 0.59 1 Linked to high confidence BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA With other complex events 14 0.03 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 11 23039247 117135877 1 6 249 1 4 0 0 1 0.04 0.55 7 0 0 7 4 7 9 4 4 42.11 56.36 43.21 0 1 2 Whitelist BRCA-EU 0.54 0.77 0 0 0.36 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 11 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 12 6952348 74100780 1 4 249 1 3 0 0 0 0.11 0.76 4 0 0 4 4 4 7 6 7 42.11 18 81.92 0 2 3 Whitelist BRCA-EU 0.54 0.93 0 0 0.48 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 13 20566869 94021481 1 3 249 1 1 0 1 0 0.8 0.29 5 0 0 5 5 5 7 7 7 42.11 36.48 60.12 0 2 1 Whitelist BRCA-EU 0.87 0.54 0 0 0.84 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 14 61293590 61382383 1 1 249 0 1 0 0 0 0.39 0.71 2 0 NA NA NA NA 6 3 3 42.11 75.64 20.65 0 4 5 Whitelist BRCA-EU 0.62 0.9 0 NA 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 15 20107833 74599485 1 3 249 1 2 0 0 0 0.3 0.17 3 0 0 NA NA NA NA NA NA 42.11 0.16 99.74 0 2 3 Whitelist BRCA-EU 0.62 0.39 0 0 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 16 16094493 16151981 1 1 249 0 1 0 0 0 0.39 0.43 2 0 NA NA NA NA 5 3 3 42.11 71.12 28.79 0 2 4 Whitelist BRCA-EU 0.62 0.68 0 NA 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 17 10979397 67572890 1 3 249 1 1 0 0 1 0.57 0.23 5 0 0 5 3 5 7 4 7 42.11 64.27 31.3 0 2 3 Whitelist BRCA-EU 0.62 0.47 0 0 0.64 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 18 47340927 64019671 12 29 249 2 3 3 4 17 0.88 0 9 0 0 9 7 7 14 8 8 42.11 20.26 79.71 0 1 2 Whitelist BRCA-EU 4 0.74 0 0 0 0.91 1 High confidence BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA Canonical without polyploidization 41 0.08 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 19 36890976 37154121 5 5 249 1 3 1 0 0 0.28 0 3 0 0 NA NA NA 6 4 4 42.11 27.68 72.14 0 2 1 Whitelist BRCA-EU 0.62 0.01 0 0 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 20 NA NA 0 0 249 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.16 NA NA NA 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 21 22867069 23423145 1 1 249 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 42.11 1.16 76.2 0 2 3 Whitelist BRCA-EU 0.62 0.93 NA NA 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 22 29194310 29487330 1 1 249 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 42.11 99.43 0.57 0 1 2 Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333047 X 9021389 9040111 1 1 249 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 42.11 99.77 0 0 0 1 Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1333047 BRCA 0.39 1.98 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218212 CGP_donor_1333047 female alive C50.9 other therapy 67 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 1 27281384 27315547 2 2 178 0 0 1 1 0 0.57 0.4 3 0 0 NA NA NA 10 7 7 24.35 40.42 56.37 0 2 1 Whitelist BRCA-EU 0.68 0.65 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 2 10826855 231490170 1 10 178 6 2 1 0 1 0.03 0.59 16 0 0 16 11 16 16 11 11 24.35 27.83 72.07 1 1 2 Whitelist BRCA-EU 0.54 0.81 0 0 0.33 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 19 0.05 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 3 44739721 196448894 1 4 178 1 2 0 0 1 0.3 0.03 5 0 0 5 3 5 6 4 4 24.35 17.01 82.85 0 3 2 Whitelist BRCA-EU 0.68 0.1 0 0 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 7 0.02 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 4 22856554 121362620 1 6 178 6 0 0 0 0 0 0.88 14 0 0 14 11 14 15 11 11 24.35 2.84 97.15 0 2 1 Whitelist BRCA-EU 0.04 1 0 0 0.03 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 12 0.03 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 5 17033864 150129239 1 7 178 5 2 0 0 0 0.02 1 9 0 0 9 3 9 12 5 5 24.35 4.62 95.25 0 2 1 Whitelist BRCA-EU 0.41 1 0 0 0.33 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 14 0.04 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 6 26748666 26759546 1 1 178 1 0 0 0 0 0.39 0.34 1 0 NA NA NA NA NA NA NA 24.35 20.94 78.92 0 2 NA Whitelist BRCA-EU 0.62 0.59 0 NA 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 7 5407183 45768077 1 5 178 2 0 1 0 2 0.3 0.87 4 0 0 4 0 3 6 3 3 24.35 25.32 74.45 0 1 2 Whitelist BRCA-EU 0.93 1 0 0 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 8 0.02 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 8 21512544 21608817 3 3 178 2 1 0 0 0 0.3 0.17 3 0 0 NA NA NA 9 3 3 24.35 82.14 17.75 0 1 0 Whitelist BRCA-EU 0.62 0.39 0 0 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 9 12999665 19849437 1 2 178 2 0 0 0 0 0.11 0.85 3 0 0 NA NA NA 8 6 6 24.35 4.1 95.19 0 2 1 Whitelist BRCA-EU 0.54 0.98 0 0 0.48 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 10 22371460 79703001 1 5 178 2 1 0 0 2 0.3 0.72 6 0 0 6 5 6 7 5 5 24.35 5.52 94.3 0 2 1 Whitelist BRCA-EU 4 0.62 0.9 0 0 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 8 0.02 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 11 11734243 116683433 1 7 178 5 0 0 0 2 0 0.72 8 0 0 8 8 8 9 9 9 24.35 0.31 99.27 0 1 2 Whitelist BRCA-EU 0.47 0.9 0 0 0.07 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 12 0.03 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 12 19486370 19504159 2 2 178 0 0 1 1 0 0.57 0.03 4 0 0 4 4 4 14 5 5 24.35 24.04 75.87 0 1 2 Whitelist BRCA-EU 0.68 0.11 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 13 41489453 67817353 20 20 178 4 5 6 5 0 0.94 0 9 0 0 9 9 9 20 20 20 24.35 33.02 66.98 0 2 1 Whitelist BRCA-EU 0.96 0 0 0 0.96 1 High confidence BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA Canonical without polyploidization 40 0.11 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 14 68006436 100602099 1 2 178 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 5 24.35 30.36 68.72 0 1 2 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 15 34109924 84788388 1 2 178 1 1 0 0 0 0.57 0.25 4 NA 0 4 3 4 5 3 3 24.35 5.49 94.51 0 2 1 Whitelist BRCA-EU 0.68 0.49 NA 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 16 10167554 10185322 2 2 178 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 24.35 42.53 57.38 0 2 NA Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 17 NA NA 0 0 178 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 0 NA NA 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 18 9880334 9902155 1 1 178 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 24.35 0 99.96 0 2 NA Whitelist BRCA-EU 0.62 0.26 NA NA 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 19 2894516 12898785 1 3 178 2 0 1 0 0 0.3 0.17 1 0 0 NA NA NA NA NA NA 24.35 0 98.44 0 2 NA Whitelist BRCA-EU 0.62 0.38 0 0 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 20 39897342 55627769 1 3 178 1 1 0 0 1 0.57 0.8 5 0 0 5 3 5 6 3 3 24.35 32.28 66.75 0 3 1 Whitelist BRCA-EU 0.62 0.95 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 21 30019809 39006416 1 2 178 1 1 0 0 0 0.57 0.18 4 0 0 4 3 4 5 3 3 24.35 0.72 76.64 0 2 1 Whitelist BRCA-EU 0.68 0.39 0 0 0.64 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 22 46944317 46958833 1 1 178 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 24.35 100 0 0 1 NA Whitelist BRCA-EU 0.62 0.9 NA NA 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1333048 X 64132064 64146996 1 1 178 1 0 0 0 0 0.39 0.39 1 0 NA NA NA NA 7 4 4 24.35 62.48 37.29 0 2 NA Whitelist BRCA-EU 0.62 0.64 0 NA 0.59 1 No BRCA-EU CGP_donor_1333048 BRCA 0.54 2.02 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218419 CGP_donor_1333048 female alive C50.9 other therapy 51 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 1 16151906 240388192 1 7 161 3 1 0 0 3 0.11 0.88 11 0 0 11 6 11 11 6 6 36.96 53.59 46.41 0 2 1 Whitelist BRCA-EU 0.62 1 0 0 0.48 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 11 0.03 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 2 167215273 179453980 8 8 161 2 2 2 2 0 1 0.12 11 0 0 11 9 10 21 10 12 36.96 34.94 64.96 0 1 3 Whitelist BRCA-EU 1 0.3 0 0 1 1 High confidence BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA Canonical without polyploidization 16 0.05 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 3 43080512 108616486 3 3 161 0 1 2 0 0 0.3 1 6 0 0 6 4 6 11 5 5 36.96 63.12 33.69 0 1 2 Whitelist BRCA-EU 0.62 1 0 0 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 4 14423743 177817040 1 2 161 1 0 0 1 0 0.57 0.53 5 0 0 5 3 5 5 3 3 36.96 0.02 99.96 0 2 1 Whitelist BRCA-EU 0.68 0.76 0 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 5 44297996 99270693 1 2 161 1 1 0 0 0 0.57 0.41 4 0 0 4 3 4 8 6 6 36.96 2.83 97.05 0 2 1 Whitelist BRCA-EU 0.68 0.66 0 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 6 67698159 108912401 6 6 161 2 2 2 0 0 0.57 0.03 1 0 0 NA NA NA 6 6 6 36.96 61.04 35.38 0 1 NA Whitelist BRCA-EU 0.68 0.11 0 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 12 0.04 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 7 6453171 114310460 1 4 161 2 0 1 0 1 0.3 0.38 7 0 0 7 4 5 11 6 6 36.96 33.89 65.89 0 2 1 Whitelist BRCA-EU 0.54 0.63 0 0 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 7 0.02 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 8 27725247 123416867 1 11 161 2 2 0 1 6 0.53 0.03 14 0 0 14 5 7 15 5 7 36.96 77.64 22.35 0 3 2 Whitelist BRCA-EU 0.87 0.11 0 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 16 0.05 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 9 130600969 136370164 1 1 161 1 0 0 0 0 0.39 0.54 2 0 NA NA NA NA NA NA NA 36.96 4.09 95.21 0 1 2 Whitelist BRCA-EU 0.62 0.77 0 NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 10 101575272 101587732 1 1 161 1 0 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 36.96 11.87 87.96 0 2 NA Whitelist BRCA-EU 0.62 0.7 0 NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 11 68314464 85167264 12 19 161 4 2 5 1 7 0.34 0 36 0 0 36 4 9 42 6 6 36.96 58.05 38.49 1 8 9 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA With other complex events 31 0.1 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 12 109711858 109731392 1 1 161 1 0 0 0 0 0.39 0.71 1 0.06 NA NA NA NA NA NA NA 36.96 14.66 85.26 0 2 NA Whitelist BRCA-EU 0.62 0.9 0.06 NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 13 NA NA 0 0 161 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 0 NA NA 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 14 21807667 77453451 1 2 161 2 0 0 0 0 0.11 0.82 2 0 0 NA NA NA NA NA NA 36.96 57.79 41.3 0 1 2 Whitelist BRCA-EU 0.54 0.96 0 0 0.48 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 15 33769897 41926282 1 2 161 1 1 0 0 0 0.57 0.63 4 NA 0 4 3 4 6 3 3 36.96 4.08 95.82 0 2 1 Whitelist BRCA-EU 0.68 0.85 NA 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 16 47252890 49891584 2 4 161 0 1 0 1 2 0.57 0 9 0 0 9 5 9 15 5 9 36.96 45.11 54.78 0 2 3 Whitelist BRCA-EU 8 0.68 0.02 0 0 0.64 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 17 NA NA 0 0 161 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.33 NA NA NA 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 18 64575303 64661984 1 1 161 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 6 4 4 36.96 71.43 28.53 0 2 3 Whitelist BRCA-EU 0.62 0.02 0 NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 19 43994023 44022845 1 1 161 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 36.96 0 99.83 0 2 NA Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 20 NA NA 0 0 161 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.51 NA NA NA 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 21 25359831 25373737 1 1 161 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 36.96 45.92 31.74 0 1 NA Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 22 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337214 X NA NA 0 0 161 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.08 NA NA NA 1 No BRCA-EU CGP_donor_1337214 BRCA 0.63 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218150 CGP_donor_1337214 female alive C50.9 radiation therapy unknown 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 1 40030347 244668955 1 2 143 0 1 1 0 0 0.57 0.02 4 0 0 4 0 3 8 0 0 74.84 64.56 32.47 2 2 4 Whitelist BRCA-EU 0.68 0.08 0 0 0.64 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 2 1350806 222426006 1 4 143 0 1 2 0 1 0.3 0.03 7 0 0 7 3 7 9 3 3 74.84 95.47 4.42 8 4 5 Whitelist BRCA-EU 0.54 0.12 0 0 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 3 96463766 189847765 1 3 143 2 1 0 0 0 0.3 0.05 7 0 0 7 3 3 12 3 4 74.84 92.08 4.75 2 3 4 Whitelist BRCA-EU 0.62 0.16 0 0 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 4 72563150 74458424 1 4 143 1 0 0 2 1 0.3 0.74 6 0 0 6 3 5 11 3 3 74.84 99.97 0 0 7 4 Whitelist BRCA-EU 0.54 0.91 0 0 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 5 NA NA 0 0 143 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.04 NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 6 70454169 71060292 1 1 143 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 74.84 99.85 0 0 3 NA Whitelist BRCA-EU 0.62 0.06 NA NA 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 7 69400344 87969248 1 2 143 0 2 0 0 0 0.11 0.09 3 0 0 NA NA NA 5 4 5 74.84 95.05 4.73 0 4 2 Whitelist BRCA-EU 0.54 0.25 0 0 0.48 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 8 NA NA 0 0 143 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.05 NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 9 103066177 140628488 1 2 143 0 2 0 0 0 0.11 0.38 2 0.01 0 NA NA NA 5 3 3 74.84 63.81 33.34 1 3 4 Whitelist BRCA-EU 0.54 0.63 0.01 0 0.48 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 10 70936403 134960838 1 2 143 0 2 0 0 0 0.11 0.23 3 0 0 NA NA NA NA NA NA 74.84 99.84 0 0 4 6 Whitelist BRCA-EU 0.54 0.46 0 0 0.48 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 11 712704 77789504 7 7 143 2 3 1 1 0 0.67 0 16 0 0 16 5 7 25 5 5 74.84 65.06 34.38 5 4 6 Whitelist BRCA-EU 0.77 0.02 0 0 0.74 0 Low confidence BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA With other complex events 14 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 12 26045555 28373301 2 3 143 1 1 0 0 1 0.57 0.69 4 0 0 4 4 4 6 4 4 74.84 79.94 19.98 0 2 5 Whitelist BRCA-EU 0.62 0.89 0 0 0.64 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 13 29064435 31237881 2 2 143 0 0 1 1 0 0.57 1 2 0 0 NA NA NA NA NA NA 74.84 1.9 98.1 0 2 4 Whitelist BRCA-EU 0.68 1 0 0 0.64 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 14 NA NA 0 0 143 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 15 NA NA 0 0 143 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.69 NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 16 78665563 79682957 1 1 143 0 1 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 74.84 99.9 0 0 5 NA Whitelist BRCA-EU 0.62 0.53 0 NA 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 17 29313383 46309227 14 23 143 3 5 3 3 9 0.84 0 29 0 0 29 4 6 49 4 6 74.84 52.24 42.34 0 2 10 Whitelist BRCA-EU 1 0 0 0 0.88 0 Low confidence BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA With other complex events 37 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 18 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 19 13013137 15240323 1 1 143 1 0 0 0 0 0.39 0.76 2 NA NA NA NA NA 6 5 6 74.84 99.83 0 0 1 4 Whitelist BRCA-EU 0.62 0.93 NA NA 0.59 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 20 36736390 62072020 8 12 143 3 3 1 1 4 0.57 0 14 0 0 14 3 6 30 5 10 74.84 54.87 36.66 4 8 7 Whitelist BRCA-EU 0.93 0 0 0 0.64 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 20 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 21 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 22 35888336 37287515 8 14 143 2 2 2 2 6 1 0 8 0 0 8 3 5 16 3 4 74.84 5.12 93.51 0 4 10 Whitelist BRCA-EU 0.81 0 0 0 1 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 22 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337217 X 83047545 100123183 1 2 143 0 2 0 0 0 0.11 0.05 3 NA 0 NA NA NA 4 3 4 74.84 85.91 10.7 0 3 2 Whitelist BRCA-EU 0.54 0.17 NA 0 0.48 0 No BRCA-EU CGP_donor_1337217 BRCA 0.29 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 5 BRCA-EU DO218796 CGP_donor_1337217 female alive chemotherapy stable disease 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 1 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 3 NA NA 0 0 19 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.63 NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 4 43269747 43938607 1 1 19 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.14 0.35 99.64 0 1 2 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 2 0.05 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 7 69512458 90055382 2 2 19 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA NA NA NA 13.14 48.16 51.72 0 2 3 Whitelist BRCA-EU 0.68 0.07 0 0 0.64 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 4 0.11 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 8 694767 64435493 2 2 19 1 0 0 1 0 0.57 0 6 0 0.05 6 5 6 9 5 5 13.14 64.76 34.88 0 2 1 Whitelist BRCA-EU 0.68 0.01 0 0.05 0.64 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 4 0.11 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 11 2277567 121475609 4 4 19 1 1 1 1 0 1 0.01 1 0.1 0 NA NA NA NA NA NA 13.14 0 99.44 0 2 NA Whitelist BRCA-EU 1 0.05 0.11 0 1 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 8 0.21 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 13 30546891 75206173 1 1 19 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 13.14 38.78 60.96 0 1 2 Whitelist BRCA-EU 0.62 0.1 NA NA 0.59 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 2 0.05 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 15 NA NA 0 0 19 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.06 NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 16 NA NA 0 0 19 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.25 NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337218 X NA NA 0 0 19 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.49 NA NA NA 0 No BRCA-EU CGP_donor_1337218 BRCA 0.5 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217934 CGP_donor_1337218 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337220 1 NA NA 0 0 46 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.8 NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 2 62990679 68694788 1 1 46 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 3 3 18.53 10.28 89.62 0 1 2 Whitelist BRCA-EU 0.62 0.68 NA NA 0.59 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 3 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 4 NA NA 0 0 46 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.62 NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 5 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 6 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 7 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 8 35834771 43182359 6 16 46 1 2 1 2 10 0.88 0 24 0 0 24 3 3 33 4 4 18.53 71.64 24.93 0 4 10 Whitelist BRCA-EU 0.62 0 0 0 0.91 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 22 0.24 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 9 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 11 60734477 70720476 13 29 46 3 5 3 2 16 0.69 0 19 0 0 19 4 6 23 4 4 18.53 54.5 45.08 0 3 1 Whitelist BRCA-EU 0.74 0 0 0 0.77 0 Low confidence BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA With other complex events 42 0.46 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 14 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 15 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 16 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 18 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337220 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337220 BRCA 0.51 2.07 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217786 CGP_donor_1337220 female deceased C50.1 radiation therapy unknown 86 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337222 1 NA NA 0 0 23 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.9 NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 2 72135354 72278692 1 2 23 0 1 0 0 1 0.39 1 2 NA NA NA NA NA NA NA NA 18.9 70.19 29.71 0 1 2 Whitelist BRCA-EU 0.68 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 3 0.07 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 3 51985595 53193861 1 1 23 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.9 1.04 98.91 0 2 NA Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 2 0.04 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 4 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 5 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 6 NA NA 0 0 23 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.86 NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 7 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 8 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 9 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 10 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 11 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 12 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 14 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 15 NA NA 0 0 23 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.32 NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 16 NA NA 0 0 23 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.31 NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 17 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 18 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 19 5982144 53477754 13 14 23 5 3 2 3 1 0.69 0 22 0 0 22 19 22 23 20 20 18.9 89.88 9.95 0 2 1 Whitelist BRCA-EU 0.9 0 0 0 0.77 1 High confidence BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA Canonical without polyploidization 27 0.59 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337222 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337222 BRCA 0.31 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 2 BRCA-EU DO218205 CGP_donor_1337222 female alive C50.9 chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 1 45555836 239312459 1 10 318 2 2 1 0 5 0.53 0.01 18 0 0 18 8 8 20 8 8 67.86 98.66 1.34 0 4 5 Whitelist BRCA-EU 0.68 0.04 0 0 0.64 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 2 34087168 122328575 1 2 318 0 0 1 1 0 0.57 0 6 0 0 6 4 4 8 5 5 67.86 74.25 25.62 0 2 3 Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 3 NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 4 56252143 56620232 1 1 318 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 10 5 5 67.86 33.4 66.52 0 2 3 Whitelist BRCA-EU 0.62 0 0 NA 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 5 13124436 176062086 1 7 318 0 2 1 0 4 0.3 0.04 12 0 0 12 4 7 12 4 4 67.86 15.98 81.33 1 2 4 Whitelist BRCA-EU 0.77 0.13 0 0 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 6 8992264 9064929 2 2 318 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 19 6 9 67.86 88.13 9.05 0 3 1 Whitelist BRCA-EU 0.68 0.26 0 0 0.64 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 7 51125608 138726024 1 3 318 0 2 0 0 1 0.11 0 5 NA 0 5 3 5 6 4 4 67.86 99.78 0 0 4 3 Whitelist BRCA-EU 0.62 0 NA 0 0.48 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 8 16880955 18365960 5 5 318 1 1 1 2 0 0.9 0.8 12 0 0 12 3 5 22 5 6 67.86 83.04 13.55 0 6 11 Whitelist BRCA-EU 0.93 0.95 0 0 0.92 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 9 NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 10 76016429 95343437 27 89 318 8 4 9 6 62 0.53 0 107 0 0 107 4 6 114 4 6 67.86 64.75 35.07 6 2 17 Whitelist BRCA-EU 0.62 0 0 0 0.64 0 Low confidence BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA With other complex events 116 0.18 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 11 115229754 117965648 1 5 318 0 0 0 1 4 0.39 0.59 2 0 0 NA NA NA 4 0 0 67.86 3.15 96.42 0 2 7 Whitelist BRCA-EU 0.68 0.81 0 0 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 12 31323707 81063192 4 4 318 0 2 1 1 0 0.57 0.23 7 0 0 7 3 7 8 4 8 67.86 48.43 47.6 3 4 2 Whitelist BRCA-EU 0.68 0.47 0 0 0.64 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 13 19820566 35483844 1 10 318 0 1 1 0 8 0.57 0.54 11 0 0 11 3 6 12 3 3 67.86 30.81 68.93 1 4 5 Whitelist BRCA-EU 17 0.96 0.77 0 0 0.64 0 Linked to low confidence BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA With other complex events 12 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 14 NA NA 0 0 318 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.17 0 NA NA 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 15 94636392 100772414 67 127 318 19 14 14 20 60 0.61 0 134 0 0 134 3 4 136 3 4 67.86 100 0 1 49 76 Whitelist BRCA-EU 1 0.96 0 0 0 0.68 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 194 0.31 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 16 3449305 5563419 1 1 318 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 13 4 4 67.86 47.01 48.47 0 7 8 Whitelist BRCA-EU 0.62 0.02 NA NA 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 17 48154795 54905796 8 13 318 2 0 2 4 5 0.26 0 14 0 0 14 6 6 49 6 8 67.86 63.28 36.71 1 6 5 Whitelist BRCA-EU 0.68 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA With other complex events 21 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 18 35722151 49683026 1 5 318 0 2 0 2 1 0.26 0.49 11 0 0 11 3 4 13 3 4 67.86 99.96 0 3 4 3 Whitelist BRCA-EU 0.68 0.73 0 0 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 19 NA NA 0 0 318 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 8 4 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.77 NA NA NA 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 20 18748595 20689447 1 2 318 1 0 0 0 1 0.39 0.12 3 0 NA NA NA NA 12 0 3 67.86 99.03 0 3 3 4 Whitelist BRCA-EU 0.54 0.3 0 NA 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 3 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 21 41393313 41404481 1 1 318 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 4 67.86 69.94 0.02 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 22 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337223 X 10040463 129288602 1 3 318 1 1 1 0 0 0.8 0 5 0 0 5 3 5 8 5 8 67.86 96.59 0.03 2 3 2 Whitelist BRCA-EU 0.87 0.01 0 0 0.84 0 No BRCA-EU CGP_donor_1337223 BRCA 0.48 3.45 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 BRCA-EU DO218428 CGP_donor_1337223 female alive C50.1 no treatment 84 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 1 147121037 226598450 26 26 53 6 6 8 6 0 0.93 0 31 0 0 31 7 9 41 9 9 23.19 35.89 63.79 0 4 6 Whitelist BRCA-EU 0.96 0 0 0 0.95 1 High confidence BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA With other complex events 52 0.49 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 2 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 3 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 4 67180444 170066444 1 2 53 1 1 0 0 0 0.57 0.58 3 NA 0 NA NA NA NA NA NA 23.19 0.08 99.92 8 2 1 Whitelist BRCA-EU 0.68 0.81 NA 0 0.64 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 4 0.04 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 5 149612597 149736948 1 1 53 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 23.19 99.85 0 0 3 4 Whitelist BRCA-EU 0.62 0.5 NA NA 0.59 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 6 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 7 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 8 102134616 129238957 1 2 53 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 23.19 99.99 0 0 3 4 Whitelist BRCA-EU 0.54 1 NA 0 0.48 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 4 0.04 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 9 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 10 45687161 46006061 1 1 53 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 23.19 0.24 99.6 0 2 3 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 11 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 12 50602704 54854751 3 3 53 2 1 0 0 0 0.3 0.74 3 0 0 NA NA NA NA NA NA 23.19 2.92 97 0 2 1 Whitelist BRCA-EU 0.62 0.91 0 0 0.59 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 6 0.06 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 13 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 14 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 15 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 16 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 17 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 18 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 19 5673576 21753985 10 10 53 2 5 1 2 0 0.31 0 22 0 0 22 4 9 24 4 9 23.19 35.8 64.02 1 3 4 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA With other complex events 20 0.19 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 20 15729398 15743403 1 1 53 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.19 99.01 0.02 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337225 X NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337225 BRCA 0.47 2.32 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217787 CGP_donor_1337225 female C50.5 no treatment 89 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 1 41613153 240778773 23 128 473 5 8 2 8 105 0.23 0 59 0 0 59 21 24 59 21 34 80.06 95.27 4.73 1 3 4 Whitelist BRCA-EU 2_3_6 0.93 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 151 0.16 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 2 26938396 230264706 40 150 473 6 13 12 9 110 0.39 0 86 0 0 86 12 20 90 12 14 80.06 63.84 36.06 0 3 2 Whitelist BRCA-EU 1_3_6 0.81 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 190 0.2 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 3 88027440 192058995 2 40 473 0 1 0 1 38 0.57 0 24 0 0 24 12 24 25 13 25 80.06 96.85 0 0 3 4 Whitelist BRCA-EU 1_2_6 0.73 0.02 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 42 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 4 NA NA 0 0 473 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 5 NA NA 0 0 473 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 6 35204768 167887451 31 157 473 7 7 9 8 126 0.95 0 89 0 0 89 12 46 102 12 12 80.06 54.88 42.12 0 2 3 Whitelist BRCA-EU 1_2_3 0.99 0 0 0 0.96 1 High confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 188 0.2 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 7 56802592 57636116 1 3 473 0 1 0 0 2 0.39 0 1 0 0 NA NA NA 11 5 6 80.06 98.76 1.01 0 5 NA Whitelist BRCA-EU 11 0.87 0 0 0 0.59 1 Linked to low confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 4 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 8 22199172 37080649 3 5 473 1 0 1 1 2 0.8 0.01 5 0 0 5 0 3 16 4 4 80.06 77.76 18.82 0 2 7 Whitelist BRCA-EU 0.68 0.04 0 0 0.84 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 9 87951079 108336047 4 6 473 2 0 1 1 2 0.57 0 9 0 0 9 4 4 39 6 8 80.06 92.92 4.53 3 1 2 Whitelist BRCA-EU 0.68 0 0 0 0.64 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 10 42502102 123920853 10 11 473 3 4 3 0 1 0.31 0.06 15 0 0 15 8 10 15 8 10 80.06 99.82 0 2 3 4 Whitelist BRCA-EU 0.62 0.19 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 21 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 11 364948 79470446 21 48 473 5 4 5 7 27 0.82 0 69 0 0 69 5 6 70 5 6 80.06 47 49.51 0 4 5 Whitelist BRCA-EU 0.68 0 0 0 0.87 1 Low confidence BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA With other complex events 69 0.07 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 12 NA NA 0 0 473 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 13 NA NA 0 0 473 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 14 24428779 24463833 1 1 473 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 80.06 99.09 0 0 4 NA Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 15 60180802 61643786 4 4 473 1 1 1 1 0 1 0.32 4 0 0 4 3 4 10 4 8 80.06 99.85 0 16 3 4 Whitelist BRCA-EU 1 0.58 0 0 1 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 16 50176214 77608909 5 5 473 3 0 1 1 0 0.28 0.89 21 0 0 21 11 11 25 12 12 80.06 95.48 0 2 3 1 Whitelist BRCA-EU 0.62 1 0 0 0.59 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 17 3609019 17728122 1 4 473 0 1 0 0 3 0.39 0.06 7 0.05 0 7 3 4 12 5 7 80.06 89.11 5.58 1 1 3 Whitelist BRCA-EU 0.68 0.19 0.05 0 0.59 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 18 NA NA 0 0 473 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 14 13 13 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.24 0 NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 19 NA NA 0 0 473 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 22 6 9 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 0 NA NA 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 20 42707779 54947979 3 3 473 1 0 1 1 0 0.8 0.02 4 0 0 4 4 4 6 5 5 80.06 99.02 0 0 4 5 Whitelist BRCA-EU 0.87 0.07 0 0 0.84 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 21 15645746 40028590 1 2 473 0 0 0 1 1 0.39 0.14 3 NA NA NA NA NA 4 4 4 80.06 16.87 60.78 0 5 2 Whitelist BRCA-EU 0.68 0.33 NA NA 0.59 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 3 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 22 41610036 46694266 1 2 473 1 0 0 0 1 0.39 1 4 0 NA 4 4 4 8 8 8 80.06 73.63 26.37 0 2 4 Whitelist BRCA-EU 0.68 1 0 NA 0.59 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 3 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337226 X 95122340 124573792 5 5 473 1 1 1 2 0 0.9 0 7 0 0 7 7 7 9 9 9 80.06 75.24 21.39 0 3 2 Whitelist BRCA-EU 0.93 0 0 0 0.92 1 No BRCA-EU CGP_donor_1337226 BRCA 0.7 3.48 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 4 BRCA-EU DO217987 CGP_donor_1337226 female alive C50.9 chemotherapy unknown 44 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337231 1 227864992 247779692 16 26 213 4 3 4 5 10 0.92 0 24 0 0 24 7 14 34 7 7 70.33 47.96 48.68 2 5 4 Whitelist BRCA-EU 19 0.96 0 0 0 0.94 1 High confidence BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA With other complex events 42 0.1 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 2 154280609 210202462 3 4 213 1 1 1 0 1 0.8 0 4 0 0 4 4 4 5 5 5 70.33 98.41 1.48 0 2 3 Whitelist BRCA-EU 0.68 0 0 0 0.84 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 3 35834260 35877340 1 1 213 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 6 3 3 70.33 70.58 26.27 3 2 3 Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 4 151455008 176061352 1 2 213 1 0 1 0 0 0.57 0.05 2 0 0 NA NA NA 5 3 5 70.33 99.8 0.19 0 2 3 Whitelist BRCA-EU 0.68 0.17 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 5 17025754 17110561 2 2 213 0 0 1 1 0 0.57 0.67 1 0 0 NA NA NA NA NA NA 70.33 97.33 0 0 4 NA Whitelist BRCA-EU 0.68 0.87 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 6 76040116 112690149 4 8 213 2 1 1 0 4 0.57 0 4 0 0 4 3 4 20 11 11 70.33 72.52 27.33 0 2 1 Whitelist BRCA-EU 1 0.01 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 7 69430244 78642476 1 2 213 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 5 4 5 70.33 98.96 0.81 0 3 4 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 8 37758778 43530647 3 5 213 0 1 1 1 2 0.8 0 10 0 0 10 3 4 35 5 8 70.33 96.58 0 0 6 4 Whitelist BRCA-EU 0.68 0.02 0 0 0.84 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 9 73011782 140301664 11 17 213 5 2 3 1 6 0.36 0 20 0 0 20 7 9 34 7 11 70.33 93.43 3.48 0 4 2 Whitelist BRCA-EU 0.87 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA With other complex events 28 0.07 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 10 35080758 134648804 2 5 213 1 1 0 0 3 0.57 0.25 6 0 0 6 3 4 7 3 4 70.33 96.15 0.44 0 3 1 Whitelist BRCA-EU 0.68 0.49 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 11 2020871 105572582 48 52 213 14 10 10 14 4 0.72 0 67 0 0 67 8 8 72 8 8 70.33 37.59 58.31 5 2 4 Whitelist BRCA-EU 0.67 0 0 0 0.8 1 High confidence BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA With other complex events 100 0.23 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 12 34572727 133356868 14 15 213 4 3 2 5 1 0.7 0.07 17 0 0 17 10 17 18 10 18 70.33 81.43 18.12 3 4 3 Whitelist BRCA-EU 0.93 0.21 0 0 0.78 1 High confidence BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA With other complex events 29 0.07 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 13 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 14 NA NA 0 0 213 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.07 NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 15 NA NA 0 0 213 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.12 NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 16 82715413 87658248 1 1 213 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 10 4 6 70.33 49.18 46.05 0 2 5 Whitelist BRCA-EU 0.62 0.17 NA NA 0.59 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 17 41379818 41396377 1 1 213 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 70.33 42.88 57.09 0 2 NA Whitelist BRCA-EU 0.62 0.12 NA NA 0.59 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 18 11309320 39661707 1 3 213 0 0 1 0 2 0.39 0.39 5 NA 0 5 3 5 5 3 3 70.33 72.6 22.75 0 3 1 Whitelist BRCA-EU 0.87 0.64 NA 0 0.59 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 19 44287113 54175478 1 8 213 0 2 0 1 5 0.3 0 9 0 0 9 6 6 23 6 10 70.33 80.9 11.83 0 2 3 Whitelist BRCA-EU 1 0.62 0 0 0 0.59 1 Linked to high confidence BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA Canonical without polyploidization 11 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 20 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 21 NA NA 0 0 213 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 22 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337231 X 31965404 144782637 5 6 213 2 2 1 0 1 0.53 0.88 15 0 0 15 8 15 19 9 9 70.33 25.22 74.55 0 2 3 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1337231 BRCA 0.74 3 Breast-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:2 4 BRCA-EU DO218828 CGP_donor_1337231 female deceased C50.9 chemotherapy unknown 50 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1337236 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 22 23029851 23090566 1 1 1 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 10.9 0 100 0 2 NA Whitelist BRCA-EU 0.62 0.05 NA NA 0.59 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 2 1 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337236 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337236 BRCA 0.37 2.12 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218827 CGP_donor_1337236 female alive C50.4 chemotherapy unknown 49 NA NA Smoking history not documented NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 1 NA NA 0 0 2 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.03 NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 3 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.03 NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337240 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337240 BRCA 0.68 2.02 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO220820 CGP_donor_1337240 female C50.5 other therapy 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 1 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 2 15500784 47777965 1 1 21 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 27.41 13.27 86.61 0 1 2 Whitelist BRCA-EU 0.62 0 0 NA 0.59 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 2 0.05 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 3 119269841 119324994 1 1 21 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 27.41 0.03 99.92 0 1 2 Whitelist BRCA-EU 0.62 0.4 NA NA 0.59 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 2 0.05 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 4 133506665 133517099 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.41 0.01 99.99 0 1 2 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 2 0.05 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 10 69005328 128836738 2 4 21 0 0 1 1 2 0.57 0 3 0 0 NA NA NA NA NA NA 27.41 0.36 99.45 0 2 1 Whitelist BRCA-EU 1 0.01 0 0 0.64 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 6 0.14 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 11 106305557 116063835 2 2 21 0 0 1 1 0 0.57 0.07 1 0 0 NA NA NA NA NA NA 27.41 99.57 0 0 3 NA Whitelist BRCA-EU 0.68 0.21 0 0 0.64 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 4 0.1 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 12 NA NA 0 0 21 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.5 NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 17 NA NA 0 0 21 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.28 NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 18 NA NA 0 0 21 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.28 NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1337241 X 18792228 94059328 1 4 21 0 0 1 1 2 0.57 0.02 3 NA 0 NA NA NA NA NA NA 27.41 99.78 0 0 3 2 Whitelist BRCA-EU 1 0.08 NA 0 0.64 0 No BRCA-EU CGP_donor_1337241 BRCA 0.86 2.26 Breast-AdenoCA NA 6 0.14 NA 2 BRCA-EU DO218388 CGP_donor_1337241 female alive C50.6 other therapy 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 1 65274493 242324249 1 7 144 2 0 0 0 5 0.11 0.16 9 0 0 9 4 4 14 5 8 89.1 100 0 0 5 3 Whitelist BRCA-EU 0.68 0.37 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 9 0.03 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 2 26557621 125163820 2 2 144 2 0 0 0 0 0.11 0.45 4 0 0 4 0 3 10 5 5 89.1 95.45 4.45 0 2 3 Whitelist BRCA-EU 0.54 0.7 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 3 NA NA 0 0 144 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.33 0 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 4 64347641 79656931 1 1 144 0 1 0 0 0 0.39 0.74 2 0 0 NA NA NA 8 7 7 89.1 79.65 20.34 0 4 5 Whitelist BRCA-EU 0.62 0.91 0 0 0.59 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 5 55570319 79663389 2 2 144 1 0 1 0 0 0.57 0.3 3 0 0 NA NA NA NA NA NA 89.1 86.55 13.32 0 4 2 Whitelist BRCA-EU 0.68 0.55 0 0 0.64 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 6 NA NA 0 0 144 0 0 0 0 0 NA 0.48 NA 0.56 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.73 0.56 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 7 92624001 130997545 1 2 144 2 0 0 0 0 0.11 0.58 6 0 0 6 3 6 9 4 5 89.1 91.42 8.36 0 3 4 Whitelist BRCA-EU 0.54 0.8 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 8 64439253 140141189 2 9 144 0 2 0 0 7 0.11 0 15 0 0 15 3 8 22 4 6 89.1 95.95 0 0 9 11 Whitelist BRCA-EU 0.97 0 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 11 0.04 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 9 33386544 33397310 1 1 144 1 0 0 0 0 0.39 0.83 2 0.01 NA NA NA NA 9 3 5 89.1 90.63 8.64 0 3 5 Whitelist BRCA-EU 0.62 0.97 0.01 NA 0.59 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 10 86628914 117916588 1 3 144 2 1 0 0 0 0.3 0.16 2 0 0 NA NA NA 6 3 3 89.1 81.87 17.96 0 4 6 Whitelist BRCA-EU 0.62 0.37 0 0 0.59 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 11 NA NA 0 0 144 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.89 0 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 12 24512471 87621313 1 6 144 2 0 0 0 4 0.11 0.03 4 0 0 4 3 4 8 3 3 89.1 99.92 0 0 4 3 Whitelist BRCA-EU 0.54 0.1 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 8 0.03 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 13 23594111 56296457 1 7 144 2 0 0 0 5 0.11 0 6 0 0 6 3 6 10 4 4 89.1 79.64 20.36 0 2 4 Whitelist BRCA-EU 0.77 0.02 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 9 0.03 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 14 60783113 91728198 1 4 144 2 0 0 0 2 0.11 0.81 4 0 0 4 4 4 5 5 5 89.1 99.09 0 0 3 4 Whitelist BRCA-EU 0.68 0.95 0 0 0.48 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 15 NA NA 0 0 144 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 0 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 16 NA NA 0 0 144 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 0 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 17 7015563 19865832 2 2 144 1 0 0 1 0 0.57 0.29 3 0 0 NA NA NA 5 3 4 89.1 84.17 15.83 0 4 2 Whitelist BRCA-EU 0.68 0.54 0 0 0.64 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 18 53571612 60132654 1 1 144 0 1 0 0 0 0.39 0.29 2 0 NA NA NA NA NA NA NA 89.1 99.96 0 0 4 6 Whitelist BRCA-EU 0.62 0.54 0 NA 0.59 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 19 NA NA 0 0 144 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.62 0 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 20 62364099 62379742 1 1 144 1 0 0 0 0 0.39 0.24 1 0 NA NA NA NA 5 0 3 89.1 98.95 0 0 9 NA Whitelist BRCA-EU 0.62 0.48 0 NA 0.59 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 21 NA NA 0 0 144 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 22 NA NA 0 0 144 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.89 NA NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347723 X NA NA 0 0 144 0 0 0 0 0 NA 0.56 NA 0.14 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.79 0.14 NA NA 0 No BRCA-EU CGP_donor_1347723 BRCA 0.48 4.22 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218656 CGP_donor_1347723 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 1 240827589 241099288 1 1 155 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 16.24 41.89 58.11 0 3 NA Whitelist BRCA-EU 0.62 0.02 NA NA 0.59 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 2 184195288 205612598 1 2 155 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA 7 7 7 16.24 0.85 99.05 0 1 2 Whitelist BRCA-EU 0.54 0 NA 0 0.48 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 3 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 4 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 5 NA NA 0 0 155 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.08 NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 6 NA NA 0 0 155 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.25 0 NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 7 1295015 158613922 112 130 155 28 25 29 30 18 0.92 0 62 0 0 62 43 62 64 43 43 16.24 56.76 43.01 4 2 3 Whitelist BRCA-EU 0.95 0 0 0 0.94 1 High confidence BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA Canonical without polyploidization 242 0.78 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 8 NA NA 0 0 155 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.03 NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 9 NA NA 0 0 155 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 0 NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 10 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 11 NA NA 0 0 155 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.05 NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 12 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 13 NA NA 0 0 155 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.21 NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 14 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 15 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 16 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 17 19300122 32788812 1 1 155 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 16.24 82.96 17.04 0 2 3 Whitelist BRCA-EU 0.62 0.95 NA NA 0.59 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 18 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 19 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 20 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 21 NA NA 0 0 155 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 0 NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 22 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347731 X 14029456 14264567 2 2 155 0 0 1 1 0 0.57 0.85 1 0 0 NA NA NA 5 5 5 16.24 5.19 94.58 0 2 NA Whitelist BRCA-EU 0.68 0.99 0 0 0.64 1 No BRCA-EU CGP_donor_1347731 BRCA 0.84 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217788 CGP_donor_1347731 female radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 1 221700044 232053721 4 7 230 2 0 0 2 3 0.26 0.54 11 0 0 11 5 8 21 8 8 15.71 40.15 59.85 0 3 4 Whitelist BRCA-EU 15 0.77 0.77 0 0 0.59 0 Linked to high confidence BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA With other complex events 11 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 2 NA NA 0 0 230 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 3 25050231 162503837 7 13 230 3 3 1 0 6 0.28 0.9 11 0 0 11 9 11 13 10 13 15.71 31.84 65.02 0 1 2 Whitelist BRCA-EU 8 0.62 1 0 0 0.59 0 Linked to low confidence BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA Canonical without polyploidization 20 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA False positive; manually removed BRCA-EU::CGP_donor_1347742 4 55636085 55981913 1 1 230 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 15.71 16.18 83.81 1 2 NA Whitelist BRCA-EU 0.62 0 NA NA 0.59 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 5 NA NA 0 0 230 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 6 3449945 26077843 1 2 230 0 2 0 0 0 0.11 0 1 NA 0.01 NA NA NA NA NA NA 15.71 0 99.86 0 2 NA Whitelist BRCA-EU 0.54 0 NA 0.01 0.48 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 7 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 8 31533581 34500724 5 6 230 3 1 0 1 1 0.28 0.88 8 0 0 8 7 8 14 7 7 15.71 21.28 78.71 0 1 0 Whitelist BRCA-EU 0.62 1 0 0 0.59 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 9 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 10 NA NA 0 0 230 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 11 47467645 49670623 1 4 230 0 1 0 1 2 0.57 0.75 5 0 0 5 4 5 7 4 6 15.71 12.95 86.49 0 1 2 Whitelist BRCA-EU 0.68 0.92 0 0 0.64 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 12 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 13 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 14 28909864 42732595 13 15 230 2 4 3 4 2 0.84 0 16 0 0 16 4 9 24 5 9 15.71 59.35 39.74 3 3 4 Whitelist BRCA-EU 0.93 0 0 0 0.88 0 Low confidence BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA With other complex events 28 0.06 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 15 66537420 102369380 54 66 230 14 12 13 15 12 0.95 0 110 0 0 110 7 7 143 7 7 15.71 41.15 58.84 11 2 3 Whitelist BRCA-EU 1 0.99 0 0 0 0.96 0 High confidence BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA With other complex events 120 0.26 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 16 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 17 29361754 67397898 35 49 230 11 9 6 9 14 0.69 0 68 0 0 68 4 8 82 5 5 15.71 91.96 3.45 11 4 11 Whitelist BRCA-EU 3_15 0.87 0 0 0 0.77 0 Low confidence BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA With other complex events 84 0.18 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 18 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 19 1420656 39968015 1 3 230 1 2 0 0 0 0.3 0.64 4 0.53 0.14 4 4 4 5 5 5 15.71 0.63 99.2 0 2 3 Whitelist BRCA-EU 0.62 0.85 0.53 0.14 0.59 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 20 NA NA 0 0 230 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.49 NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 21 NA NA 0 0 230 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.77 NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 22 NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347742 X NA NA 0 0 230 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1347742 BRCA 0.52 2.12 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 BRCA-EU DO218651 CGP_donor_1347742 female other therapy 38 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1347751 1 1174539 247054567 1 37 828 2 33 0 0 2 0 0.01 50 0 0 50 38 50 51 38 38 18.21 1.87 98.13 0 3 2 Whitelist BRCA-EU 0 0.03 0 0 0 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 72 0.04 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 2 11684173 217099835 2 6 828 0 6 0 0 0 0 0.71 56 0 0 56 30 56 71 30 30 18.21 2.03 97.86 0 2 3 Whitelist BRCA-EU 0.04 0.9 0 0 0.03 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 12 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 3 2964392 195733210 1 21 828 1 15 1 2 2 0 0 27 0 0 27 9 25 27 9 9 18.21 44.7 55.25 3 2 3 Whitelist BRCA-EU 0 0 0 0 0 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 40 0.02 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 4 39447460 141907056 2 4 828 0 4 0 0 0 0.01 0 13 0 0 13 11 13 24 17 19 18.21 1.32 98.65 0 2 3 Whitelist BRCA-EU 0.21 0 0 0 0.16 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 8 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 5 43955540 44793186 3 3 828 0 3 0 0 0 0.03 0.01 5 0 0 5 0 4 44 7 9 18.21 1.33 98.55 0 2 3 Whitelist BRCA-EU 0.41 0.04 0 0 0.33 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 6 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 6 152309653 152506752 2 2 828 0 2 0 0 0 0.11 0.38 3 0 0 NA NA NA 27 27 27 18.21 0.45 99.4 0 2 3 Whitelist BRCA-EU 0.54 0.63 0 0 0.48 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 4 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 7 63018209 154939154 1 16 828 0 13 0 1 2 0 0 20 0 0 20 16 20 21 17 17 18.21 0.72 99.04 0 2 3 Whitelist BRCA-EU 0 0 0 0 0 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 30 0.02 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 8 30557729 121251839 28 31 828 8 6 8 6 3 0.9 0.03 41 0 0 41 11 20 46 11 20 18.21 57.79 42.1 11 3 2 Whitelist BRCA-EU 0.93 0.12 0 0 0.93 1 High confidence BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA With other complex events 59 0.04 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 9 1126285 125671728 1 14 828 2 5 0 0 7 0.02 0.04 10 0 0 10 7 10 11 8 8 18.21 79.15 20.24 0 1 2 Whitelist BRCA-EU 11 0.41 0.14 0 0 0.33 1 Linked to high confidence BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA Canonical without polyploidization 21 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 10 8078107 8138500 2 2 828 0 2 0 0 0 0.11 0.36 6 0 0 6 3 4 23 7 8 18.21 0.19 99.62 0 3 1 Whitelist BRCA-EU 0.54 0.61 0 0 0.48 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 4 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 11 67012799 101615430 204 212 828 45 64 47 48 8 0.21 0 175 0 0 175 18 38 193 18 20 18.21 47.89 48.37 0 5 6 Whitelist BRCA-EU 18_9 0.62 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA With other complex events 416 0.25 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 12 69081233 69279870 2 2 828 0 2 0 0 0 0.11 0.22 4 0 0 4 3 4 29 14 14 18.21 1.68 98.24 0 3 2 Whitelist BRCA-EU 0.54 0.45 0 0 0.48 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 4 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 13 30115214 95607099 1 11 828 0 11 0 0 0 0 0.07 14 0 0 14 6 14 17 7 7 18.21 0.67 98.69 0 2 3 Whitelist BRCA-EU 0 0.21 0 0 0 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 22 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 14 100542829 100833657 3 3 828 0 3 0 0 0 0.03 0.62 6 0 0 6 0 4 26 19 20 18.21 1.96 97.12 0 2 3 Whitelist BRCA-EU 0.41 0.83 0 0 0.33 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 6 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 15 34326314 93601501 1 14 828 0 14 0 0 0 0 0.24 19 0 0 19 13 19 20 14 14 18.21 28.84 71.06 0 3 2 Whitelist BRCA-EU 0 0.48 0 0 0 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 28 0.02 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 16 1073804 87928916 1 10 828 0 9 1 0 0 0 0.45 19 0 0 19 10 19 20 11 11 18.21 54.66 40.35 0 2 1 Whitelist BRCA-EU 0.01 0.69 0 0 0.01 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 20 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 17 79964962 80047617 2 3 828 0 2 0 0 1 0.11 0.39 3 0 0 NA NA NA 18 8 8 18.21 41.13 54.44 0 2 5 Whitelist BRCA-EU 0.62 0.64 0 0 0.48 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 5 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 18 20621968 77903678 15 16 828 3 2 4 6 1 0.51 0.1 16 0 0 16 11 16 17 11 11 18.21 28.6 71.2 4 2 1 Whitelist BRCA-EU 0.68 0.27 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA Canonical without polyploidization 31 0.02 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 19 3035388 56097984 2 4 828 0 2 1 1 0 0.57 0.17 20 0 0 20 7 12 24 9 17 18.21 7.26 92.57 0 2 3 Whitelist BRCA-EU 0.68 0.38 0 0 0.64 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 8 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 20 11282201 60847010 1 5 828 0 5 0 0 0 0 0.03 8 0 0 8 8 8 11 9 9 18.21 0.35 98.65 0 2 3 Whitelist BRCA-EU 0.1 0.11 0 0 0.07 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 10 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 21 35227093 36252135 8 8 828 1 7 0 0 0 0 0.52 13 0 0 13 0 7 14 0 3 18.21 2.1 75.25 0 5 7 Whitelist BRCA-EU 0.06 0.76 0 0 0.04 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 16 0.01 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 22 23509428 46442089 1 3 828 0 3 0 0 0 0.03 0.15 6 0 0 6 6 6 7 7 7 18.21 99.68 0.32 0 1 2 Whitelist BRCA-EU 0.41 0.35 0 0 0.33 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 6 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347751 X 66906315 67054751 2 2 828 0 2 0 0 0 0.11 0.34 2 0 0 NA NA NA 29 12 14 18.21 5.49 94.14 0 2 4 Whitelist BRCA-EU 0.54 0.59 0 0 0.48 1 No BRCA-EU CGP_donor_1347751 BRCA 0.9 1.96 Breast-AdenoCA NA 4 0 NA 0 BRCA-EU DO218168 CGP_donor_1347751 female deceased chemotherapy complete response 51 NA 0 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 1 13998865 164737069 1 3 114 1 0 0 1 1 0.57 0.11 4 0.08 0.01 4 4 4 6 5 5 77.1 94.38 5.62 0 4 6 Whitelist BRCA-EU 0.62 0.29 0.08 0.01 0.64 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 5 0.02 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 2 18030650 144747582 6 19 114 1 2 2 1 13 0.88 0 17 0 0 17 7 11 19 7 11 77.1 72.1 27.81 0 4 2 Whitelist BRCA-EU 6_8_13 0.93 0 0 0 0.91 1 High confidence BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA With other complex events 25 0.11 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 3 111697816 175315809 1 2 114 0 0 0 1 1 0.39 0.2 1 NA NA NA NA NA NA NA NA 77.1 63.73 36.24 0 5 NA Whitelist BRCA-EU 0.68 0.42 NA NA 0.59 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 3 0.01 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 4 NA NA 0 0 114 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.13 NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 5 121858765 145262175 4 4 114 0 0 2 2 0 0.26 1 5 0 0 5 5 5 7 7 7 77.1 84.36 15.52 0 2 4 Whitelist BRCA-EU 0.62 1 0 0 0.59 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 8 0.04 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 6 99814201 149683677 3 18 114 0 2 1 0 15 0.3 0 10 0 0 10 10 10 17 12 15 77.1 61.06 38.69 0 2 4 Whitelist BRCA-EU 2_8 0.87 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA Before polyploidization 21 0.09 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 7 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 8 11620647 85317947 5 27 114 1 0 2 2 22 0.53 0 25 0 0 25 9 11 26 9 11 77.1 94.5 5.49 0 4 2 Whitelist BRCA-EU 2_6_10_13 0.7 0 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA With other complex events 32 0.14 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 9 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 10 47144724 120650614 22 32 114 0 4 8 10 10 0.01 0 33 0 0 33 12 21 42 12 12 77.1 51.68 44.91 0 2 4 Whitelist BRCA-EU 0.46 0 0 0 0.24 1 High confidence BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA With other complex events 54 0.24 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 11 9716075 10044104 1 1 114 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 77.1 99.57 0 0 3 4 Whitelist BRCA-EU 0.62 0.74 NA NA 0.59 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 2 0.01 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 12 NA NA 0 0 114 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.15 0 NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 13 72316685 73246809 1 10 114 1 0 0 1 8 0.57 0 10 0 0 10 8 9 11 8 9 77.1 68.45 31.55 0 4 2 Whitelist BRCA-EU 2_8 0.96 0.01 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA Before polyploidization 12 0.05 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 14 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 15 24643289 24816157 1 1 114 0 1 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 77.1 97.28 2.72 0 5 NA Whitelist BRCA-EU 0.62 0.33 0 NA 0.59 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 2 0.01 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 16 NA NA 0 0 114 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 17 19928172 20495690 1 1 114 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 11 5 5 77.1 73.17 22.38 0 10 NA Whitelist BRCA-EU 0.62 0 0 NA 0.59 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 2 0.01 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 18 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 19 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 20 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 21 NA NA 0 0 114 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.65 NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 22 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1347756 X NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1347756 BRCA 0.37 3.69 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218167 CGP_donor_1347756 female deceased other therapy disease progression 47 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353426 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 19 3748390 6350451 2 5 7 0 1 1 0 3 0.57 0 8 0 0 8 0 7 12 3 5 83.07 84.38 8.34 0 2 3 Whitelist BRCA-EU 20 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 7 0.5 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 20 18634093 24566092 1 5 7 0 1 0 1 3 0.57 0 8 0 0 8 5 5 10 6 6 83.07 58.04 34.77 0 4 2 Whitelist BRCA-EU 0.62 0 0 0 0.64 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 7 0.5 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353426 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353426 BRCA 0.22 3.34 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218506 CGP_donor_1353426 female alive chemotherapy unknown 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 1 194600186 226332495 1 3 267 1 1 0 0 1 0.57 0 4 0 0 4 3 4 10 4 4 55.65 63.94 36.06 0 4 3 Whitelist BRCA-EU 0.62 0.02 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 2 29612237 216118880 1 5 267 0 2 1 0 2 0.3 0 9 0 0 9 4 5 14 4 6 55.65 36.14 63.76 0 2 3 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 3 35493158 68042933 1 3 267 1 1 1 0 0 0.8 0.19 5 0 0 5 5 5 12 5 5 55.65 80.35 19.6 0 2 1 Whitelist BRCA-EU 0.87 0.41 0 0 0.84 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 4 20249209 76099019 16 16 267 4 4 4 4 0 1 0.04 28 0 0 28 12 21 34 12 14 55.65 60.11 36.85 0 2 3 Whitelist BRCA-EU 1 0.13 0 0 1 0 High confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA With other complex events 32 0.06 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 5 112844490 180014178 16 43 267 4 5 3 4 27 0.92 0 47 0 0 47 19 23 59 19 23 55.65 75.36 21.85 0 3 4 Whitelist BRCA-EU 14 0.93 0 0 0 0.94 0 High confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA With other complex events 59 0.11 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 6 100548524 101591934 3 9 267 0 2 2 2 3 0.57 0 11 0 0 11 7 7 43 7 10 55.65 75.66 21.5 5 1 2 Whitelist BRCA-EU 0.62 0 0 0 0.64 0 Linked to low confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA Canonical without polyploidization 15 0.03 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA False positive; manually removed BRCA-EU::CGP_donor_1353427 7 52996256 55214181 1 1 267 0 1 0 0 0 0.39 0.28 1 0 NA NA NA NA 6 4 5 55.65 24.23 73.22 2 3 NA Whitelist BRCA-EU 0.62 0.52 0 NA 0.59 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 8 24504414 115953978 4 11 267 0 1 1 2 7 0.57 0.03 13 0 0 13 3 7 22 4 7 55.65 80.87 19.12 2 9 3 Whitelist BRCA-EU 0.98 0.1 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 9 NA NA 0 0 267 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 10 9142443 92352593 30 34 267 6 9 7 8 4 0.88 0 30 0 0 30 5 18 32 5 6 55.65 82.86 13.69 33 3 4 Whitelist BRCA-EU 6 0.87 0 0 0 0.91 0 Low confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA With other complex events 64 0.12 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 11 43911891 49523847 2 3 267 1 1 0 0 1 0.57 0.14 4 0 0 4 4 4 7 7 7 55.65 42.37 54.17 0 2 3 Whitelist BRCA-EU 0.62 0.34 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 12 34421929 39789925 4 4 267 2 1 0 1 0 0.57 0.31 7 0 0 7 7 7 17 12 12 55.65 96.26 0 0 4 3 Whitelist BRCA-EU 0.68 0.56 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 13 19588462 34821835 1 4 267 1 0 1 1 1 0.8 0.18 5 0 0 5 5 5 6 6 6 55.65 71.24 25.91 0 1 2 Whitelist BRCA-EU 1 0.4 0 0 0.84 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 14 41756381 106200525 12 37 267 2 3 4 3 25 0.88 0 39 0 0 39 26 37 44 30 31 55.65 5.28 91.02 0 2 3 Whitelist BRCA-EU 5 0.88 0 0 0 0.91 0 High confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA Canonical without polyploidization 49 0.09 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 15 65632569 65918297 1 2 267 1 0 0 0 1 0.39 0.57 3 0 NA NA NA NA 7 3 5 55.65 18.2 81.7 0 1 3 Whitelist BRCA-EU 0.54 0.8 0 NA 0.59 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 16 NA NA 0 0 267 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 9 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.32 NA NA NA 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 17 30795695 44125802 6 12 267 2 1 1 2 6 0.88 0 16 0 0 16 4 9 20 4 6 55.65 63.84 31.73 0 2 5 Whitelist BRCA-EU 0.68 0 0 0 0.91 0 Low confidence BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 18 57250182 57307033 2 2 267 1 0 0 1 0 0.57 0.34 2 0 0 NA NA NA 5 3 3 55.65 48.18 47.17 0 1 2 Whitelist BRCA-EU 0.68 0.59 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 19 NA NA 0 0 267 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 20 20985421 50369991 1 3 267 1 0 0 1 1 0.57 0.67 2 0 0 NA NA NA 4 3 3 55.65 98.92 0 0 3 5 Whitelist BRCA-EU 0.87 0.87 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 21 NA NA 0 0 267 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 22 NA NA 0 0 267 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 NA NA NA 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353427 X 12209235 76071674 1 7 267 1 1 0 0 5 0.57 1 4 0 0 4 3 4 7 3 5 55.65 40.8 59.2 0 2 3 Whitelist BRCA-EU 0.77 1 0 0 0.64 0 No BRCA-EU CGP_donor_1353427 BRCA 0.29 2.76 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:2 4 BRCA-EU DO218709 CGP_donor_1353427 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 1 51262983 230781288 1 21 266 3 5 1 0 12 0.09 0.07 21 0 0 21 5 12 21 5 7 34.19 62.26 37.74 22 4 3 Whitelist BRCA-EU 11_4_X 0.54 0.2 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 30 0.06 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 2 4213463 239950315 1 25 266 6 7 2 1 9 0.09 0.05 20 0 0 20 4 11 20 4 7 34.19 93.58 6.33 22 3 4 Whitelist BRCA-EU 1_3 0.62 0.15 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 41 0.08 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 3 11132192 187999428 1 17 266 4 4 1 0 8 0.13 0.03 9 0 0 9 5 8 11 6 6 34.19 24.61 75.27 2 2 4 Whitelist BRCA-EU 12 0.62 0.11 0 0 0.55 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 26 0.05 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 4 656520 175209866 1 12 266 3 6 0 0 3 0.01 0.71 13 0 0 13 8 10 14 8 10 34.19 8.6 91.22 7 2 3 Whitelist BRCA-EU 1 0.54 0.9 0 0 0.21 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 21 0.04 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 5 88095799 88110734 2 2 266 0 0 1 1 0 0.57 0.8 1 0 0 NA NA NA 5 3 5 34.19 0.14 99.73 0 2 NA Whitelist BRCA-EU 0.68 0.95 0 0 0.64 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 6 32633265 145532067 1 8 266 1 5 0 0 2 0.01 0.9 8 0 0 8 3 5 9 3 5 34.19 49.11 50.75 3 3 2 Whitelist BRCA-EU 0.21 1 0 0 0.19 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 14 0.03 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 7 25768443 143181395 1 14 266 2 5 0 0 7 0.02 0.08 15 0 0 15 4 6 17 4 6 34.19 88.48 11.49 12 4 5 Whitelist BRCA-EU 1_3 0.62 0.22 0 0 0.33 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 21 0.04 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 8 13207571 80558114 1 4 266 3 1 0 0 0 0.11 0.07 4 0 0 4 3 4 6 3 6 34.19 13.7 86.29 0 2 0 Whitelist BRCA-EU 0.54 0.21 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 9 7982073 123684654 1 6 266 1 3 0 1 1 0.28 0.53 9 0 0 9 7 9 10 8 10 34.19 11.07 88.23 3 2 4 Whitelist BRCA-EU 0.54 0.76 0 0 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 11 0.02 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 10 16357745 37595706 2 3 266 1 0 1 0 1 0.57 0.18 4 0 0 4 3 4 10 3 6 34.19 93.06 6.77 5 4 5 Whitelist BRCA-EU 0.62 0.4 0 0 0.64 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 11 3924104 111750456 1 12 266 2 8 0 0 2 0 0.3 20 0 0 20 6 16 21 7 17 34.19 1.22 98.36 7 2 4 Whitelist BRCA-EU 1 0.04 0.55 0 0 0.04 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 22 0.04 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 12 1693173 101999586 1 10 266 3 3 0 0 4 0.11 1 12 0 0 12 7 9 16 7 9 34.19 40.6 59.32 9 2 1 Whitelist BRCA-EU 3 0.68 1 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 16 0.03 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 13 21150224 21196318 1 1 266 1 0 0 0 0 0.39 0.61 2 0 NA NA NA NA 6 3 4 34.19 53.34 46.66 0 0 2 Whitelist BRCA-EU 0.62 0.83 0 NA 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 14 28249686 28275778 2 2 266 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 13 4 4 34.19 13.16 85.96 0 0 2 Whitelist BRCA-EU 0.68 0.01 0 0 0.64 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 15 27123643 27173796 1 1 266 0 1 0 0 0 0.39 0.26 1 0 0 NA NA NA NA NA NA 34.19 0 99.89 0 2 NA Whitelist BRCA-EU 0.62 0.5 0 0 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 16 20019582 47270382 1 2 266 1 1 0 0 0 0.57 0.85 2 0 0 NA NA NA 4 3 3 34.19 14.18 85.7 0 1 2 Whitelist BRCA-EU 0.68 0.98 0 0 0.64 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 17 19206268 74306196 1 5 266 0 2 0 0 3 0.11 0.45 6 0 0 6 3 6 6 3 6 34.19 29.04 70.94 5 5 2 Whitelist BRCA-EU X 0.45 0.69 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 18 48619974 48704753 1 1 266 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 34.19 0 99.96 0 2 NA Whitelist BRCA-EU 0.62 0.32 NA NA 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 19 12740279 13311725 2 2 266 0 2 0 0 0 0.11 0.26 4 0 0 4 0 3 5 0 0 34.19 0.97 97.91 0 2 3 Whitelist BRCA-EU 0.54 0.5 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 20 15212232 15656029 2 2 266 2 0 0 0 0 0.11 0.03 4 0 0 4 0 3 7 4 4 34.19 98.58 0.46 4 1 2 Whitelist BRCA-EU 0.54 0.12 0 0 0.48 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 21 14569618 20677798 2 5 266 1 0 1 0 3 0.57 0.01 9 0 0 9 3 6 10 4 7 34.19 11.19 58.54 0 0 2 Whitelist BRCA-EU 0.68 0.03 0 0 0.64 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 22 21448717 21461144 1 1 266 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 34.19 0 100 0 2 NA Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353428 X 6630360 122028303 1 10 266 2 3 1 0 4 0.34 0.78 8 0 0 8 4 6 11 5 7 34.19 1.08 98.69 2 2 3 Whitelist BRCA-EU 1 0.62 0.94 0 0 0.59 0 No BRCA-EU CGP_donor_1353428 BRCA 0.7 2.52 Breast-AdenoCA NA 16 0.03 NA 2 BRCA-EU DO220823 CGP_donor_1353428 female alive radiation therapy unknown 82 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353429 1 4239492 120478390 1 4 83 1 1 0 0 2 0.57 0.68 6 0.2 0.03 6 6 6 8 8 8 89.77 100 0 0 3 4 Whitelist BRCA-EU 2 0.68 0.88 0.2 0.03 0.64 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 6 0.04 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 2 96077913 99683605 4 6 83 2 0 1 1 2 0.57 0.23 9 0 0 9 6 9 13 8 13 89.77 93.74 3.57 2 2 3 Whitelist BRCA-EU 1 0.93 0.47 0 0 0.64 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 10 0.06 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 3 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 4 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 5 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 6 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 7 NA NA 0 0 83 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.58 NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 8 22728682 56379069 16 31 83 3 3 4 6 15 0.68 0 45 0 0 45 4 5 48 4 5 89.77 77.05 19.53 6 8 16 Whitelist BRCA-EU 0.62 0 0 0 0.76 0 Low confidence BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA With other complex events 47 0.28 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 9 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 10 NA NA 0 0 83 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.41 NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 11 39761387 78170654 21 36 83 3 5 7 6 15 0.64 0 55 0 0 55 4 5 60 4 5 89.77 45.62 50.92 13 6 8 Whitelist BRCA-EU 0.64 0 0 0 0.72 0 Low confidence BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA With other complex events 57 0.34 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 12 115183500 117580056 1 4 83 2 0 0 0 2 0.11 0.6 7 0 0 7 6 7 8 6 6 89.77 98.79 1.13 0 2 4 Whitelist BRCA-EU 0.68 0.81 0 0 0.48 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 6 0.04 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 13 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 14 22417021 22625427 1 2 83 0 0 1 0 1 0.39 1 3 NA NA NA NA NA 10 3 4 89.77 79.28 4.81 0 2 3 Whitelist BRCA-EU 0.68 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 3 0.02 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 15 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 16 NA NA 0 0 83 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.9 NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 17 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 18 33652936 74019038 1 2 83 0 0 0 1 1 0.39 0.49 3 NA NA NA NA NA 5 5 5 89.77 99.56 0.41 0 4 2 Whitelist BRCA-EU 0.68 0.73 NA NA 0.59 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 3 0.02 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 19 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 20 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 21 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 22 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 0 0 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353429 X 2366659 2399103 1 1 83 0 1 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 89.77 96.61 0 0 4 NA Whitelist BRCA-EU 0.62 0.95 NA NA 0.59 0 No BRCA-EU CGP_donor_1353429 BRCA 0.27 4.13 Breast-LobularCA NA 2 0.01 NA 4 BRCA-EU DO218062 CGP_donor_1353429 female deceased radiation therapy unknown 76 NA 0 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA EU 0 0 BRCA-EU::CGP_donor_1353434 1 215614552 222810908 3 3 291 0 0 2 1 0 0.3 0.51 3 0 0 NA NA NA 27 15 15 52.04 54.73 42.3 0 5 6 Whitelist BRCA-EU 0.62 0.75 0 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 2 139329169 229311022 2 3 291 1 1 0 0 1 0.57 0.34 10 0 0 10 7 10 23 7 7 52.04 26.31 70.99 0 3 4 Whitelist BRCA-EU 0.87 0.59 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 3 4348327 180122843 1 10 291 1 2 0 0 7 0.3 0.65 23 0 0 23 13 18 23 13 13 52.04 74.13 25.75 0 6 7 Whitelist BRCA-EU 0.68 0.86 0 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 4 60055635 137193613 18 25 291 4 5 5 4 7 0.97 0 42 0 0 42 9 9 50 9 9 52.04 19.25 80.51 0 2 5 Whitelist BRCA-EU 0.74 0.02 0 0 0.98 1 High confidence BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA With other complex events 43 0.07 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 5 53341903 168054637 1 2 291 0 1 0 1 0 0.57 0 2 NA 0 NA NA NA NA NA NA 52.04 51.76 48.11 0 2 3 Whitelist BRCA-EU 0.68 0 NA 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 6 104620681 144195202 10 10 291 4 4 0 2 0 0.22 0 5 0 0 5 5 5 19 7 8 52.04 68.57 31.29 2 3 4 Whitelist BRCA-EU 0.62 0.01 0 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 7 81985835 150500113 1 7 291 3 3 0 0 1 0.11 1 8 0 0 8 6 8 12 7 10 52.04 65.55 34.23 0 4 2 Whitelist BRCA-EU 0.54 1 0 0 0.48 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 8 41354665 138193202 3 8 291 0 2 0 1 5 0.3 0.01 27 0 0 27 5 10 29 5 10 52.04 71.75 28.25 0 8 9 Whitelist BRCA-EU 18 0.54 0.05 0 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 9 28293725 100939714 1 3 291 2 1 0 0 0 0.3 0.23 7 0 0 7 3 6 11 5 5 52.04 78.5 21.36 0 2 3 Whitelist BRCA-EU 0.62 0.46 0 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 10 68844762 119811669 2 2 291 0 0 1 1 0 0.57 0.26 3 0 0 NA NA NA 12 12 12 52.04 21.04 78.8 0 3 2 Whitelist BRCA-EU 0.68 0.51 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 11 15792864 34594279 2 2 291 0 1 0 1 0 0.57 0.48 12 0 0 12 5 9 16 5 7 52.04 48.53 51.04 1 4 2 Whitelist BRCA-EU 0.68 0.73 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 12 12029908 100315219 1 3 291 2 1 0 0 0 0.3 0 4 0.02 0 4 4 4 6 4 4 52.04 99.91 0.01 0 3 4 Whitelist BRCA-EU 0.62 0.02 0.02 0 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 13 95887161 104716957 1 4 291 1 1 0 0 2 0.57 0.42 4 0 0 4 4 4 8 6 6 52.04 11.27 88.73 0 2 4 Whitelist BRCA-EU 0.62 0.67 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 14 38208122 38233100 2 2 291 0 0 1 1 0 0.57 0.74 3 0 0 NA NA NA 10 6 7 52.04 61.27 35.21 0 3 4 Whitelist BRCA-EU 0.68 0.91 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 15 28941386 52345122 16 16 291 5 1 4 6 0 0.32 0 14 0 0 14 5 14 16 5 16 52.04 50.79 49.04 0 2 3 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA With other complex events 32 0.05 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 16 54924999 63331715 2 4 291 1 1 0 0 2 0.57 0.27 1 0 0 NA NA NA 4 3 4 52.04 56.64 43.25 0 2 NA Whitelist BRCA-EU 13 0.54 0.51 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 17 NA NA 0 0 291 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA 10 3 7 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.99 0 NA NA 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 18 3883153 56577093 5 6 291 0 2 2 1 1 0.53 0.02 12 0 0 12 5 8 12 5 8 52.04 1.77 98.19 3 2 4 Whitelist BRCA-EU 0.93 0.07 0 0 0.64 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 19 NA NA 0 0 291 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 0 NA NA 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 20 8904083 14408957 1 3 291 3 0 0 0 0 0.03 0.04 1 0 0 NA NA NA 4 3 3 52.04 98.9 0 0 4 NA Whitelist BRCA-EU 0.41 0.13 0 0 0.33 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 21 36165386 36243758 1 1 291 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 6 3 4 52.04 46.25 31.1 0 1 3 Whitelist BRCA-EU 0.62 0.81 NA NA 0.59 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 22 NA NA 0 0 291 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.81 NA NA NA 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1353434 X 100431897 124341462 2 2 291 2 0 0 0 0 0.11 1 3 0 0 NA NA NA 12 10 10 52.04 33.83 65.94 0 2 1 Whitelist BRCA-EU 0.54 1 0 0 0.48 1 No BRCA-EU CGP_donor_1353434 BRCA 0.5 2.94 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 4 BRCA-EU DO218684 CGP_donor_1353434 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 1 NA NA 0 0 203 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 2 143479926 239003903 17 43 203 9 2 2 4 26 0.05 0 7 0 0 7 7 7 11 8 8 39.11 9.93 89.97 0 1 2 Whitelist BRCA-EU 3 0.62 0 0 0 0.48 1 High confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA Canonical without polyploidization 60 0.15 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 3 11137338 196396672 22 42 203 5 4 5 8 20 0.65 0 22 0 0 22 9 22 24 9 9 39.11 24.53 75.35 0 2 3 Whitelist BRCA-EU 2 0.87 0 0 0 0.73 1 High confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA With other complex events 64 0.16 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 4 NA NA 0 0 203 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 5 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 6 2192497 33282947 14 42 203 3 4 4 3 28 0.96 0 33 0 0 33 4 6 39 6 6 39.11 24.08 72.93 3 2 3 Whitelist BRCA-EU 14_20_9 0.85 0 0 0 0.98 1 Low confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA With other complex events 56 0.14 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 7 82119803 152023011 1 12 203 1 0 0 1 10 0.57 0.35 6 0 0 6 3 5 8 5 7 39.11 96 3.77 0 3 2 Whitelist BRCA-EU 2 0.93 0.6 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA With other complex events 14 0.03 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 8 NA NA 0 0 203 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 9 18053450 78248433 2 10 203 1 1 0 0 8 0.57 0 6 0 0 6 4 6 30 8 10 39.11 17.71 82.13 0 2 1 Whitelist BRCA-EU 20_6 0.96 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA Canonical without polyploidization 12 0.03 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 10 16134914 26009524 2 2 203 0 0 1 1 0 0.57 0.09 1 0.12 0 NA NA NA NA NA NA 39.11 0.19 99.63 0 2 NA Whitelist BRCA-EU 0.68 0.25 0.12 0 0.64 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 11 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 12 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 13 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 14 84761805 88311296 3 8 203 2 0 0 1 5 0.3 0 7 0 0 7 7 7 9 9 9 39.11 2.32 96.76 0 2 1 Whitelist BRCA-EU 20_6 0.62 0.01 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA Canonical without polyploidization 11 0.03 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 15 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 16 NA NA 0 0 203 0 0 0 0 0 NA 0.83 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.97 NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 17 36225698 77635571 1 1 203 1 0 0 0 0 0.39 0.39 3 NA NA NA NA NA 4 4 4 39.11 95.57 0 0 3 1 Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 18 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 19 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 20 13487327 62399711 27 63 203 5 6 8 8 36 0.8 0 59 0 0 59 9 10 60 9 10 39.11 46.13 52.89 0 2 4 Whitelist BRCA-EU 14_6 0.65 0 0 0 0.84 1 High confidence BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA With other complex events 90 0.22 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 21 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 22 NA NA 0 0 203 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364028 X 97144592 97172985 1 1 203 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 39.11 0.79 98.98 0 2 NA Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1364028 BRCA 0.68 2.2 Breast-AdenoCA NA 2 0 NA 2 BRCA-EU DO218254 CGP_donor_1364028 female alive C50.4 radiation therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 8 9293466 32402177 1 1 3 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 9.22 15.79 84.2 0 1 2 Whitelist BRCA-EU 0.62 0.34 NA NA 0.59 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 2 0.33 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 12 128108997 129032643 1 1 3 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 9.22 0.69 99.23 0 2 3 Whitelist BRCA-EU 0.62 0.33 NA NA 0.59 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 2 0.33 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 17 26708094 30887439 1 1 3 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 9.22 85.4 14.6 0 2 3 Whitelist BRCA-EU 0.62 0.23 NA NA 0.59 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 2 0.33 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364029 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1364029 BRCA 0.64 2.07 Breast-DCIS NA 0 0 NA 2 BRCA-EU DO218478 CGP_donor_1364029 female alive C50.4 radiation therapy unknown 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 1 1118222 78228584 2 4 529 2 0 1 1 0 0.57 0 7 0.26 0 7 5 7 12 9 9 65.59 44.88 52.1 0 2 3 Whitelist BRCA-EU 0.68 0 0.26 0 0.64 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 8 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 2 2226914 240877127 1 5 529 5 0 0 0 0 0 0 12 0 0 12 7 12 13 7 13 65.59 99.89 0.02 0 4 3 Whitelist BRCA-EU 0.1 0 0 0 0.07 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 10 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 3 132552596 181241474 3 3 529 1 0 1 1 0 0.8 0 8 0 0 8 4 8 16 7 8 65.59 52.79 47.09 1 4 3 Whitelist BRCA-EU 0.87 0 0 0 0.84 1 Linked to low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 6 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 4 10572157 187339577 1 6 529 3 0 1 1 1 0.28 0 15 0 0 15 6 8 16 7 7 65.59 65.12 32.42 0 2 3 Whitelist BRCA-EU 0.54 0 0 0 0.59 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 11 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 5 154600947 177590689 1 8 529 1 1 0 0 6 0.57 0 6 0 0 6 4 6 7 5 5 65.59 99.83 0.01 1 3 4 Whitelist BRCA-EU 15_20 0.68 0 0 0 0.64 1 Linked to low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA After polyploidization 10 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 6 57399664 170784376 47 80 529 13 13 10 11 33 0.9 0 94 0 0 94 7 14 103 7 9 65.59 53.96 45.8 8 2 3 Whitelist BRCA-EU 17_20 0.66 0 0 0 0.92 1 High confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 127 0.12 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 7 94323289 158670701 25 29 529 7 6 6 6 4 0.99 0 50 0 0 50 5 9 56 6 6 65.59 60.82 36.4 0 4 5 Whitelist BRCA-EU 16_20 1 0.01 0 0 1 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 54 0.05 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 8 14121698 32262262 6 6 529 2 1 1 2 0 0.88 0 9 0 0 9 3 9 52 5 10 65.59 96.57 0.01 6 1 4 Whitelist BRCA-EU 0.93 0.01 0 0 0.91 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 12 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 9 17470135 34867650 7 7 529 3 3 0 1 0 0.28 0.01 5 0 0 5 3 4 40 6 7 65.59 53.64 43.26 0 3 2 Whitelist BRCA-EU 0.62 0.04 0 0 0.59 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 14 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 10 74137063 96621191 16 41 529 4 3 6 3 25 0.68 0 56 0 0 56 5 5 69 5 5 65.59 77.06 19.09 12 3 8 Whitelist BRCA-EU 0.62 0 0 0 0.76 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 57 0.05 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 11 32528936 85324051 26 28 529 5 4 8 9 2 0.45 0.01 25 0 0 25 6 14 35 6 9 65.59 35.87 63.71 9 2 3 Whitelist BRCA-EU 3 0.62 0.03 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 54 0.05 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 12 38404016 75256147 32 58 529 6 7 7 12 26 0.43 0 86 0 0 86 4 5 94 6 6 65.59 96.06 0.05 11 3 4 Whitelist BRCA-EU 10 0.68 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 90 0.09 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 13 69277093 114427555 10 10 529 4 1 2 3 0 0.57 0.4 12 0 0 12 12 12 18 12 12 65.59 4.82 94.53 4 1 2 Whitelist BRCA-EU 0.68 0.65 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA Canonical without polyploidization 20 0.02 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 14 38796189 50735944 7 10 529 0 4 1 2 3 0.17 0.53 13 0 0 13 3 6 22 4 7 65.59 54.86 41.43 0 4 2 Whitelist BRCA-EU 0.62 0.76 0 0 0.59 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 17 0.02 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 15 31008365 57097215 18 19 529 7 4 4 3 1 0.57 0.01 23 0 0 23 5 14 31 7 19 65.59 99.04 0.86 0 3 4 Whitelist BRCA-EU 0.62 0.03 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 37 0.03 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 16 54538858 83487717 21 23 529 3 4 7 7 2 0.49 0 20 0 0 20 5 11 37 11 11 65.59 95.48 0 1 4 3 Whitelist BRCA-EU 7 0.68 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 44 0.04 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 17 15573740 80067670 1 27 529 4 2 0 1 20 0.17 0 27 0 0 27 5 5 28 5 5 65.59 64.42 31.13 1 2 3 Whitelist BRCA-EU 20_6 0.62 0 0 0 0.59 1 Linked to high confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 34 0.03 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 18 8130584 63766775 1 4 529 4 0 0 0 0 0.01 0.02 7 0.01 0 7 5 7 11 5 5 65.59 99.45 0.51 1 3 2 Whitelist BRCA-EU 0.21 0.09 0.01 0 0.16 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 8 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 19 NA NA 0 0 529 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.07 NA NA NA 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 0 0 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 20 23008810 61019046 19 29 529 4 5 3 7 10 0.61 0 44 0 0 44 5 8 52 5 6 65.59 43.14 49.47 12 2 7 Whitelist BRCA-EU 17_5_6 0.68 0 0 0 0.68 1 Low confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 48 0.05 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 21 19481412 46289658 1 6 529 1 3 0 0 2 0.11 1 12 0 0 12 7 9 13 7 7 65.59 61.05 9.23 2 3 4 Whitelist BRCA-EU 0.54 1 0 0 0.48 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 10 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 22 33198998 43984307 2 11 529 1 0 0 1 9 0.57 0 14 0 0 14 4 4 28 5 5 65.59 89.78 9.84 0 4 2 Whitelist BRCA-EU 6 0.87 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA With other complex events 13 0.01 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1364033 X 117716570 117753520 1 1 529 0 0 0 1 0 0.39 0 2 0 NA NA NA NA 5 3 3 65.59 46.86 49.76 0 1 2 Whitelist BRCA-EU 0.62 0 0 NA 0.59 1 No BRCA-EU CGP_donor_1364033 BRCA 0.32 3.04 Breast-AdenoCA NA 2 0 NA 25 BRCA-EU DO217907 CGP_donor_1364033 female alive C50.4 other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374616 1 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 2 140684743 151867962 1 1 144 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.41 0 99.91 2 2 NA Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 3 149533512 196009872 20 29 144 4 7 5 4 9 0.75 0 39 0 0 39 11 39 42 11 11 26.41 44.92 51.93 0 2 1 Whitelist BRCA-EU X 0.8 0 0 0 0.83 1 High confidence BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA With other complex events 49 0.17 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 4 130912884 131094293 1 1 144 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.41 0 99.99 0 2 NA Whitelist BRCA-EU 0.62 0.01 NA NA 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 5 44337255 44866631 2 2 144 0 0 1 1 0 0.57 0.04 2 NA 0 NA NA NA 4 3 3 26.41 0.56 99.32 0 2 3 Whitelist BRCA-EU 0.68 0.13 NA 0 0.64 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 6 126738473 126821159 1 1 144 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.41 0 99.76 0 2 NA Whitelist BRCA-EU 0.62 0.01 NA NA 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 7 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 8 41958285 66532612 9 13 144 2 1 3 3 4 0.75 0 19 0 0 19 19 19 32 23 23 26.41 92.16 7.73 0 3 2 Whitelist BRCA-EU X 0.99 0 0 0 0.83 1 High confidence BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA Canonical without polyploidization 22 0.08 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 9 15857937 16426935 1 1 144 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 26.41 29.28 70.58 0 1 2 Whitelist BRCA-EU 0.62 0.33 NA NA 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 10 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 11 65259613 107911894 1 5 144 2 0 0 0 3 0.11 1 8 0 0 8 4 4 11 7 7 26.41 49.31 46.79 0 1 2 Whitelist BRCA-EU 0.62 1 0 0 0.48 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 12 115486437 118202319 3 5 144 0 1 1 1 2 0.8 0.33 4 0 0 4 4 4 11 5 11 26.41 37.87 58.45 0 1 2 Whitelist BRCA-EU 13 0.93 0.58 0 0 0.84 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 8 0.03 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 13 75367254 101955240 1 11 144 2 0 2 1 6 0.53 0 13 0 0 13 8 9 18 8 9 26.41 66.31 33.69 0 1 2 Whitelist BRCA-EU 0.87 0 0 0 0.64 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 16 0.06 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 14 68754085 69966445 1 1 144 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 4 26.41 1.48 79.14 0 2 3 Whitelist BRCA-EU 0.62 0.34 NA NA 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 15 NA NA 0 0 144 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.42 NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 16 NA NA 0 0 144 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.81 NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 17 46038267 79606798 3 8 144 0 1 1 1 5 0.8 0 6 0 0 6 4 6 19 5 10 26.41 70.32 29.68 0 2 3 Whitelist BRCA-EU 0.87 0 0 0 0.84 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 11 0.04 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 18 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 19 34372322 59071044 13 17 144 5 2 2 4 4 0.56 0 31 0 0 31 5 8 37 5 8 26.41 58.03 41.43 0 4 2 Whitelist BRCA-EU X 0.62 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA With other complex events 30 0.1 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 20 NA NA 0 0 144 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.63 NA NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 21 NA NA 0 0 144 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 11 6 6 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 0 NA NA 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 22 49773435 51043972 1 4 144 0 0 2 1 1 0.3 0.01 5 0 0 5 3 4 9 3 3 26.41 99.27 0.22 0 5 2 Whitelist BRCA-EU 0.68 0.04 0 0 0.59 1 No BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374616 X 3867520 67168967 4 20 144 0 2 1 1 16 0.57 0 26 0 0 26 10 10 32 14 14 26.41 91.9 7.87 0 1 2 Whitelist BRCA-EU 0.54 0 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1374616 BRCA 0.5 1.95 Breast-AdenoCA With other complex events 24 0.08 frameshift_deletion,17_7579470_-_C,CN:2 2 BRCA-EU DO218404 CGP_donor_1374616 female deceased C50.4 other therapy complete response 55 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 0 BRCA-EU::CGP_donor_1374617 1 112053543 248836624 18 24 85 3 3 6 6 6 0.57 0 44 0 0 44 10 22 49 10 11 14.05 63.01 33.84 0 4 3 Whitelist BRCA-EU 3_8 0.93 0 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA With other complex events 42 0.25 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 2 39651129 42809829 1 1 85 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 14.05 1.3 98.6 0 2 3 Whitelist BRCA-EU 0.62 0.05 NA NA 0.59 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 3 160434199 161100669 1 16 85 1 0 1 0 14 0.57 0 7 0 0 7 7 7 7 7 7 14.05 0.3 99.58 0 2 1 Whitelist BRCA-EU 8 0.79 0 0 0 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA Canonical without polyploidization 18 0.11 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 4 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 5 3582348 85001879 1 6 85 1 0 1 0 4 0.57 0.02 2 0.07 0.04 NA NA NA 6 6 6 14.05 4.61 95.25 0 1 2 Whitelist BRCA-EU 8 0.62 0.08 0.07 0.04 0.64 1 Linked to high confidence BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA With other complex events 8 0.05 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 6 142532891 153504521 1 1 85 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 14.05 6.41 93.45 0 1 2 Whitelist BRCA-EU 0.62 0.2 NA NA 0.59 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 7 NA NA 0 0 85 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.25 NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 8 809654 92053762 8 30 85 3 1 1 3 22 0.57 0 23 0 0 23 11 23 27 12 25 14.05 63.11 33.47 0 1 2 Whitelist BRCA-EU 3 0.93 0 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA With other complex events 38 0.22 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 9 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 10 11806340 11895380 1 1 85 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 6 6 14.05 21.65 78.17 0 2 3 Whitelist BRCA-EU 0.62 0.03 0 NA 0.59 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 11 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 12 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 13 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 14 37629154 38256665 1 2 85 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 3 14.05 0.58 98.5 0 3 2 Whitelist BRCA-EU 0.54 1 NA 0 0.48 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 15 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 16 48296750 52072994 1 3 85 1 0 0 0 2 0.39 0 2 0 0 NA NA NA 6 6 6 14.05 36.54 63.36 0 1 2 Whitelist BRCA-EU 0.87 0 0 0 0.59 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 17 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 18 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 19 28611450 30836186 1 1 85 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.05 3.76 88.94 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 20 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 21 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 22 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374617 X NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374617 BRCA 0.5 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218611 CGP_donor_1374617 female alive C50.3 chemotherapy complete response 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 1 NA NA 0 0 51 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.4 NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 2 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 3 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 4 92456391 92490478 1 1 51 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 29.64 0.02 99.96 0 1 2 Whitelist BRCA-EU 0.62 0.81 NA NA 0.59 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 5 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 7 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 8 NA NA 0 0 51 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 10 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 11 26862299 100822979 23 28 51 5 10 4 4 5 0.23 0 39 0 0 39 36 39 41 36 36 29.64 41.49 55.04 7 1 2 Whitelist BRCA-EU 19 0.62 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA Canonical without polyploidization 51 0.5 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 14 28112043 76435431 10 10 51 2 2 3 3 0 0.94 0 17 0 0 17 8 17 18 8 8 29.64 39.04 60.04 11 2 1 Whitelist BRCA-EU 0.96 0 0 0 0.96 1 High confidence BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA With other complex events 20 0.2 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 15 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 16 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 17 15908987 17799554 1 1 51 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA 8 5 8 29.64 90.67 4.89 0 1 2 Whitelist BRCA-EU 0.62 0.37 NA NA 0.59 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 19 293047 16895004 1 6 51 0 0 0 1 5 0.39 0 5 0.28 0.28 5 5 5 7 6 6 29.64 9.95 89.88 0 2 1 Whitelist BRCA-EU 11 0.93 0 0.28 0.28 0.59 1 Linked to high confidence BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA Canonical without polyploidization 7 0.07 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1374618 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1374618 BRCA 0.62 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218831 CGP_donor_1374618 female alive C50.2 other therapy disease progression 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 1 248271088 249172233 3 3 82 0 1 2 0 0 0.3 0.41 1 0 0 NA NA NA NA NA NA 20.23 42 57.97 0 2 NA Whitelist BRCA-EU 0.62 0.66 0 0 0.59 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 6 0.04 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 2 213818309 214251778 2 2 82 0 2 0 0 0 0.11 0.16 1 0 0 NA NA NA NA NA NA 20.23 0.18 99.73 0 3 NA Whitelist BRCA-EU 0.54 0.37 0 0 0.48 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 3 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 4 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 5 66307170 180674011 17 17 82 5 7 3 2 0 0.32 0 32 0 0 32 6 17 33 7 7 20.23 55.62 44.25 0 2 3 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA With other complex events 34 0.21 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 6 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 7 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 8 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 9 79470368 79858644 1 1 82 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 4 20.23 0.27 96.62 0 2 3 Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 10 35197608 36253486 1 1 82 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 20.23 0 99.82 0 2 NA Whitelist BRCA-EU 0.62 0.41 NA NA 0.59 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 11 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 12 49536825 125542894 6 6 82 2 0 2 2 0 0.57 0.11 9 0 0 9 9 9 10 9 9 20.23 18.5 81.42 0 2 1 Whitelist BRCA-EU 0.68 0.28 0 0 0.64 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 12 0.07 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 13 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 14 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 16 51856069 69324699 39 39 82 8 7 14 10 0 0.4 0 19 0 0 19 5 10 22 5 11 20.23 47.13 52.76 1 1 2 Whitelist BRCA-EU 0.63 0 0 0 0.6 0 Low confidence BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA With other complex events 78 0.48 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 17 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 18 9193256 11488747 1 1 82 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 20.23 2.94 97.02 0 1 2 Whitelist BRCA-EU 0.62 0.9 NA NA 0.59 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 19 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 20 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 22 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397086 X NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397086 BRCA 0.59 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218347 CGP_donor_1397086 female alive no treatment 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 1 27719485 28835197 1 1 16 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 2.57 0.45 99.55 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 2 0.06 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 3 173590603 174351578 1 1 16 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 2.57 0.38 99.48 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 2 0.06 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 5 56141249 179216352 11 11 16 4 3 2 2 0 0.8 0 7 0 0 7 7 7 7 7 7 2.57 7.2 92.67 1 2 1 Whitelist BRCA-EU 0.87 0 0 0 0.84 1 High confidence BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA Canonical without polyploidization 22 0.69 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 16 NA NA 0 0 16 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.6 NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 17 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 19 44893617 44974676 1 1 16 0 0 0 1 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 2.57 0 99.83 0 2 NA Whitelist BRCA-EU 0.62 0.52 NA NA 0.59 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 2 0.06 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 22 NA NA 0 0 16 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.39 NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397088 X NA NA 0 0 16 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.79 NA NA NA 1 No BRCA-EU CGP_donor_1397088 BRCA 0.65 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218770 CGP_donor_1397088 female alive chemotherapy complete response 52 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 1 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 2 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 3 4365807 88334064 31 34 160 10 4 10 7 3 0.36 0 56 0 0 56 11 14 58 11 14 77.32 88.71 8.25 5 3 4 Whitelist BRCA-EU 6 0.68 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA With other complex events 65 0.2 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 4 NA NA 0 0 160 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 5 10796083 37374061 10 12 160 2 1 4 3 2 0.57 0.07 16 0 0 16 3 6 20 3 4 77.32 99.88 0 0 5 4 Whitelist BRCA-EU 0.68 0.21 0 0 0.64 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 22 0.07 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 6 38510448 42541219 7 10 160 3 2 0 2 3 0.44 0 12 0 0 12 5 12 50 6 6 77.32 53.3 43.87 6 3 1 Whitelist BRCA-EU 0.62 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA With other complex events 17 0.05 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 7 142633724 143183318 1 1 160 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 77.32 99.78 0 0 4 5 Whitelist BRCA-EU 0.62 0.01 NA NA 0.59 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 8 NA NA 0 0 160 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.02 NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 9 16569701 16829265 2 8 160 0 0 1 1 6 0.57 0 7 0 0 7 3 5 18 3 5 77.32 81.15 18.68 0 9 3 Whitelist BRCA-EU 0.62 0 0 0 0.64 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 10 0.03 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 10 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 11 NA NA 0 0 160 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.5 NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 12 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 13 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 14 37788175 38095963 1 1 160 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA 5 3 3 77.32 19.61 76.69 0 2 3 Whitelist BRCA-EU 0.62 0.49 NA NA 0.59 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 15 NA NA 0 0 160 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.34 NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 16 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 17 7817380 20103793 9 31 160 1 2 3 3 22 0.75 0 27 0 0 27 3 4 37 4 6 77.32 52.08 43.48 1 2 1 Whitelist BRCA-EU 6 0.63 0 0 0 0.83 1 Linked to low confidence BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA With other complex events 40 0.12 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 18 23774186 24221440 1 2 160 0 0 1 0 1 0.39 0.33 1 0 NA NA NA NA 7 6 7 77.32 75.67 19.69 0 1 NA Whitelist BRCA-EU 0.68 0.58 0 NA 0.59 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 3 0.01 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 19 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 20 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 21 16987432 25695444 5 5 160 2 1 1 1 0 0.9 0 9 0 0 9 5 9 24 5 5 77.32 46.77 30.58 0 3 2 Whitelist BRCA-EU 0.93 0 0 0 0.92 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 10 0.03 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 22 25396028 26010940 3 3 160 1 1 1 0 0 0.8 0 4 0 0 4 0 3 32 4 5 77.32 64.63 24.26 0 4 3 Whitelist BRCA-EU 0.87 0 0 0 0.84 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397260 X 127611009 127635339 1 1 160 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 77.32 99.77 0 0 4 NA Whitelist BRCA-EU 0.62 0.03 NA NA 0.59 1 No BRCA-EU CGP_donor_1397260 BRCA 0.41 3.03 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218605 CGP_donor_1397260 female alive chemotherapy unknown 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 5 NA NA 0 0 10 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.72 NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 6 15977035 48169967 7 7 10 1 0 3 3 0 0.28 0 8 0 0 8 3 6 11 3 3 28.76 96.73 0 1 4 3 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 14 0.7 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 15 97344146 98044523 1 1 10 0 0 1 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 28.76 0 99.82 0 2 NA Whitelist BRCA-EU 0.62 0.49 NA NA 0.59 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 2 0.1 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397261 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397261 BRCA 0.75 2.17 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO220824 CGP_donor_1397261 female alive chemotherapy unknown 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 1 42397122 165508066 1 2 235 0 1 0 1 0 0.57 0 3 NA 0 NA NA NA 5 0 4 87.86 90.59 6.44 0 2 3 Whitelist BRCA-EU 0.68 0 NA 0 0.64 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 4 0.01 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 2 NA NA 0 0 235 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 3 19789999 172742141 2 6 235 1 3 0 0 2 0.11 0.05 6 0 0 6 5 6 10 7 7 87.86 99.97 0 2 4 3 Whitelist BRCA-EU 0.54 0.17 0 0 0.48 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 10 0.02 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 4 1732199 2847113 1 1 235 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 87.86 99.4 0.58 0 2 3 Whitelist BRCA-EU 0.62 0 NA NA 0.59 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 2 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 5 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 6 NA NA 0 0 235 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 7 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 8 141507171 141606750 1 1 235 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 14 3 4 87.86 95.15 1.42 0 5 6 Whitelist BRCA-EU 0.62 1 0 NA 0.59 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 2 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 9 1026203 36225240 9 23 235 1 0 4 4 14 0.13 0 32 0 0 32 4 4 38 4 4 87.86 99.75 0.11 0 11 6 Whitelist BRCA-EU 0.26 0 0 0 0.55 0 Low confidence BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA With other complex events 32 0.07 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 10 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 11 NA NA 0 0 235 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 12 30388748 78339897 27 61 235 8 8 5 6 34 0.8 0 64 0 0 64 3 5 77 10 10 87.86 99.56 0.36 3 5 4 Whitelist BRCA-EU 0.62 0 0 0 0.84 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 88 0.19 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 13 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 14 106348075 106376922 1 1 235 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA 5 4 5 87.86 96.3 0 0 4 NA Whitelist BRCA-EU 0.62 0.04 NA NA 0.59 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 2 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 15 45190744 45281200 1 1 235 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 87.86 95.1 0 0 3 NA Whitelist BRCA-EU 0.62 0.1 NA NA 0.59 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 2 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 16 937916 47287050 13 24 235 3 3 3 4 11 0.97 0 14 0 0 14 4 9 31 5 9 87.86 84.6 10.88 0 5 6 Whitelist BRCA-EU 0.76 0 0 0 0.98 0 Low confidence BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA With other complex events 37 0.08 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 17 1009336 47506989 1 23 235 3 0 2 1 17 0.34 0 13 0 0 13 4 6 14 4 4 87.86 87.89 7.66 0 2 3 Whitelist BRCA-EU 0.68 0 0 0 0.59 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 29 0.06 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 18 NA NA 0 0 235 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.09 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 19 NA NA 0 0 235 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.26 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 20 43024445 61292598 25 68 235 5 4 8 8 43 0.56 0 64 0 0 64 4 6 69 4 4 87.86 85.49 13.54 2 16 26 Whitelist BRCA-EU 0.73 0 0 0 0.64 0 Low confidence BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA With other complex events 93 0.2 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 21 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 22 NA NA 0 0 235 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.77 NA NA NA 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 0 0 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397262 X 41488122 137758483 5 5 235 1 0 2 2 0 0.53 0.3 15 0 0 15 6 9 17 6 7 87.86 86.34 10.28 0 4 2 Whitelist BRCA-EU 0.68 0.54 0 0 0.64 0 No BRCA-EU CGP_donor_1397262 BRCA 0.19 3.34 Breast-AdenoCA NA 10 0.02 NA 0 BRCA-EU DO217887 CGP_donor_1397262 female chemotherapy unknown NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 1 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.23 NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397263 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397263 BRCA 0.63 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218174 CGP_donor_1397263 female alive no treatment 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.35 NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 7 65857572 75716637 1 1 2 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 17.74 99.78 0 0 3 NA Whitelist BRCA-EU 0.62 0.27 NA NA 0.59 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 2 0.5 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 16 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.17 NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397264 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397264 BRCA 0.61 2.21 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218408 CGP_donor_1397264 female alive chemotherapy unknown 42 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 3 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 6 NA NA 0 0 27 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 0 NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 8 6519247 106752938 1 15 27 1 0 0 0 14 0.39 0 1 0 0 NA NA NA NA NA NA 9.67 0 99.99 0 2 NA Whitelist BRCA-EU 0.93 0 0 0 0.59 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 16 0.3 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 12 47942208 77453722 1 7 27 1 1 0 0 5 0.57 0 2 0 0 NA NA NA 4 4 4 9.67 23.49 76.43 0 1 2 Whitelist BRCA-EU 0.62 0 0 0 0.64 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 9 0.17 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 14 NA NA 0 0 27 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.17 NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 17 18843278 21714120 1 1 27 0 0 1 0 0 0.39 0.04 1 NA NA NA NA NA 5 5 5 9.67 16.18 79.37 0 1 NA Whitelist BRCA-EU 0.62 0.13 NA NA 0.59 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 2 0.04 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 19 NA NA 0 0 27 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.66 NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397277 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397277 BRCA 0.39 1.97 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218457 CGP_donor_1397277 female alive C50.4 chemotherapy complete response 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 1 118786735 229640451 1 8 340 0 5 0 0 3 0 0.31 6 0 0 6 3 4 12 6 6 38.94 42.1 57.89 0 5 2 Whitelist BRCA-EU 0.06 0.56 0 0 0.07 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 13 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 2 22430768 219287015 1 12 340 0 9 0 0 3 0 0.7 23 0 0 23 9 21 26 9 13 38.94 23.57 76.33 1 2 3 Whitelist BRCA-EU 0 0.89 0 0 0 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 21 0.03 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 3 16551373 174457913 1 8 340 1 5 2 0 0 0.07 0.52 17 0 0 17 8 12 18 8 12 38.94 37.48 59.35 0 2 3 Whitelist BRCA-EU 0.54 0.76 0 0 0.48 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 16 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 4 57050999 113668713 1 7 340 1 5 0 0 1 0.01 0.91 11 0 0 11 11 11 21 12 16 38.94 55.42 42.1 0 2 3 Whitelist BRCA-EU 0.41 1 0 0 0.19 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 13 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 5 3098253 179517961 1 7 340 1 1 0 0 5 0.57 0.57 10 0 0 10 3 5 11 3 6 38.94 85.61 11.69 0 1 3 Whitelist BRCA-EU 6 0.96 0.8 0 0 0.64 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 9 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 6 4537599 51815201 1 6 340 0 4 1 0 1 0.04 1 9 0 0 9 7 9 16 11 11 38.94 15.53 84.32 0 2 3 Whitelist BRCA-EU 0.54 1 0 0 0.36 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 11 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 7 5041125 108355553 1 10 340 2 6 0 0 2 0.01 0.02 16 0 0 16 16 16 25 19 25 38.94 1.61 98.17 1 2 3 Whitelist BRCA-EU 0.18 0.07 0 0 0.16 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 18 0.03 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 8 36028735 142305374 40 43 340 9 12 10 9 3 0.9 0 72 0 0 72 6 12 76 6 8 38.94 95.35 1.23 0 6 5 Whitelist BRCA-EU 0.96 0 0 0 0.92 0 Low confidence BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA With other complex events 83 0.12 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 9 107321608 138347470 1 5 340 1 4 0 0 0 0.04 0.67 6 0 0 6 4 6 14 6 6 38.94 33.04 64.41 0 2 3 Whitelist BRCA-EU 0.45 0.88 0 0 0.36 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 10 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 10 1636150 21147771 2 3 340 0 1 1 0 1 0.57 0.24 7 0 0 7 3 7 16 10 10 38.94 15.48 84.34 0 2 3 Whitelist BRCA-EU 0.87 0.48 0 0 0.64 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 5 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 11 128835208 129138378 2 3 340 1 1 0 0 1 0.57 0.8 3 0 0 NA NA NA 16 10 10 38.94 14.22 85.35 0 3 4 Whitelist BRCA-EU 0.87 0.95 0 0 0.64 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 5 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 12 20774381 21376367 1 1 340 0 1 0 0 0 0.39 0.25 2 0 NA NA NA NA 8 5 5 38.94 71.92 24.34 0 2 3 Whitelist BRCA-EU 0.62 0.49 0 NA 0.59 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 2 0 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 13 NA NA 0 0 340 0 0 0 0 0 NA 0.77 NA 0 NA NA NA NA 17 8 9 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 0 NA NA 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 0 0 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 14 22945721 46525917 1 4 340 1 2 0 0 1 0.3 0.53 3 0 0 NA NA NA 5 3 3 38.94 49.3 34.78 0 2 3 Whitelist BRCA-EU 0.68 0.76 0 0 0.59 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 7 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 15 33060156 81482186 1 9 340 0 6 0 0 3 0 0.13 13 0 0 13 8 13 14 9 9 38.94 33.34 66.54 0 2 3 Whitelist BRCA-EU 0.15 0.33 0 0 0.03 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 15 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 16 5819550 66339860 1 2 340 1 1 0 0 0 0.57 0.01 3 NA 0.04 NA NA NA 5 5 5 38.94 55.62 39.86 1 2 3 Whitelist BRCA-EU 0.68 0.05 NA 0.04 0.64 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 4 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 17 55797493 58810084 1 2 340 0 2 0 0 0 0.11 0.09 2 0 0 NA NA NA 4 3 3 38.94 27.35 68.21 0 2 3 Whitelist BRCA-EU 0.54 0.25 0 0 0.48 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 4 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 18 8898838 55435585 1 4 340 0 3 0 0 1 0.03 0.87 7 0 0 7 4 7 8 5 5 38.94 42.56 57.41 0 2 1 Whitelist BRCA-EU 0.54 1 0 0 0.33 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 7 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 19 1710637 41908419 1 8 340 0 5 1 1 1 0.04 0.23 14 0 0 14 6 6 17 8 8 38.94 38.93 60.9 0 2 3 Whitelist BRCA-EU 0.54 0.47 0 0 0.38 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 15 0.02 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 20 24618052 32376565 1 2 340 0 2 0 0 0 0.11 0.85 4 0 0 4 4 4 6 6 6 38.94 36.35 55.12 0 2 3 Whitelist BRCA-EU 0.54 0.99 0 0 0.48 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 4 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 21 36226696 36242779 1 1 340 0 1 0 0 0 0.39 0.62 1 0 NA NA NA NA 4 0 3 38.94 0.02 77.34 0 2 NA Whitelist BRCA-EU 0.62 0.83 0 NA 0.59 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 2 0 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 22 32016439 43299408 1 4 340 1 3 0 0 0 0.11 0.13 3 0 0 NA NA NA 4 3 3 38.94 44.11 55.89 0 2 3 Whitelist BRCA-EU 0.54 0.32 0 0 0.48 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 8 0.01 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397278 X 12671854 155005826 1 12 340 0 6 0 0 6 0 0.62 9 0 0 9 7 9 14 7 7 38.94 60.81 39.01 1 2 1 Whitelist BRCA-EU 7 0.04 0.83 0 0 0.03 0 No BRCA-EU CGP_donor_1397278 BRCA 0.42 2.02 Breast-AdenoCA NA 18 0.03 stopgain,17_7579529_T_C,CN:1 1 BRCA-EU DO218669 CGP_donor_1397278 female alive C50.2 no treatment 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 17 21559476 21833887 3 3 5 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 6.27 29.85 70.15 0 1 2 Whitelist BRCA-EU 0.87 0 0 0 0.84 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 6 0.6 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397279 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397279 BRCA 0.7 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:1 2 BRCA-EU DO217800 CGP_donor_1397279 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.17 NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397281 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397281 BRCA 0.71 2.24 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217953 CGP_donor_1397281 female alive C50.4 chemotherapy complete response 43 NA NA Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 1 64274863 103554606 2 2 91 0 0 1 1 0 0.57 0.85 4 0 0 4 4 4 8 5 5 26.57 51.34 48.63 2 1 2 Whitelist BRCA-EU 0.68 0.98 0 0 0.64 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 4 0.02 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 2 7020042 224061832 1 5 91 3 2 0 0 0 0.14 0.45 10 0 0 10 7 10 11 7 7 26.57 1.32 98.59 15 2 1 Whitelist BRCA-EU 0.62 0.69 0 0 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 10 0.05 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 3 763757 27175998 7 7 91 2 1 2 2 0 0.93 0.04 8 0 0 8 8 8 17 9 9 26.57 3.29 96.66 5 1 2 Whitelist BRCA-EU 0.96 0.13 0 0 0.95 1 High confidence BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA Canonical without polyploidization 14 0.08 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 4 175679532 176247612 2 2 91 0 0 1 1 0 0.57 0.09 2 NA 0 NA NA NA NA NA NA 26.57 99.9 0 0 0 1 Whitelist BRCA-EU 0.68 0.25 NA 0 0.64 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 4 0.02 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 5 163529606 164165704 1 1 91 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 26.57 0.35 99.53 1 2 3 Whitelist BRCA-EU 0.62 0.16 NA NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 6 30355822 33369738 1 1 91 0 1 0 0 0 0.39 0.66 2 0 NA NA NA NA 4 3 3 26.57 67.87 31.99 0 2 3 Whitelist BRCA-EU 0.62 0.87 0 NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 7 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 8 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 9 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 10 63336248 105982577 1 2 91 0 2 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 26.57 1.13 98.68 1 2 3 Whitelist BRCA-EU 0.54 0.69 NA 0 0.48 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 4 0.02 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 11 47517073 81666277 1 5 91 0 0 2 0 3 0.11 0.32 7 0 0 7 3 4 7 3 4 26.57 40.62 58.96 3 2 1 Whitelist BRCA-EU 17 0.68 0.57 0 0 0.48 1 Linked to high confidence BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA With other complex events 7 0.04 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 12 64476342 102495318 1 4 91 1 2 0 1 0 0.57 1 6 0 0 6 4 6 9 5 5 26.57 47.46 52.46 2 2 3 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 8 0.04 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 13 19917049 22379119 3 3 91 1 1 1 0 0 0.8 0.14 5 0 0 5 3 5 13 6 8 26.57 86.75 10.11 0 1 2 Whitelist BRCA-EU 0.87 0.33 0 0 0.84 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 6 0.03 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 14 95196844 106824449 1 2 91 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA 6 5 6 26.57 95.79 0.93 3 2 3 Whitelist BRCA-EU 0.68 1 NA 0 0.64 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 4 0.02 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 15 79326236 79732927 1 1 91 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 26.57 0.4 99.51 0 2 3 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 16 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 17 6803218 63783380 31 33 91 10 7 4 10 2 0.36 0 48 0 0 48 8 14 52 9 9 26.57 78.92 21.08 20 3 2 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA With other complex events 64 0.35 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 18 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 19 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 20 NA NA 0 0 91 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 21 16358846 16727719 1 1 91 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.57 0.77 76.59 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 22 43004647 43210097 1 1 91 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.57 0.4 99.6 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397282 X 71044629 71351571 1 1 91 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 26.57 0.2 99.57 0 2 3 Whitelist BRCA-EU 0.62 0.25 NA NA 0.59 1 No BRCA-EU CGP_donor_1397282 BRCA 0.35 1.93 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218176 CGP_donor_1397282 female alive C50.2 chemotherapy complete response 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 3 NA NA 0 0 10 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 6 NA NA 0 0 10 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 0 NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 8 29912585 30769464 1 1 10 0 1 0 0 0 0.39 0.09 3 NA NA NA NA NA 6 3 4 15.82 96.57 0 0 1 3 Whitelist BRCA-EU 0.62 0.25 NA NA 0.59 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 2 0.1 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 13 22162251 22479547 1 1 10 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 6 6 15.82 78.47 21.53 0 1 2 Whitelist BRCA-EU 0.62 0 0 NA 0.59 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 2 0.1 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1397284 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1397284 BRCA 0.77 2.02 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218621 CGP_donor_1397284 female alive C50 radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 1 12564655 82668874 1 2 91 0 0 0 1 1 0.39 0.05 1 NA NA NA NA NA NA NA NA 24.36 41.67 58.33 0 2 NA Whitelist BRCA-EU 0.68 0.16 NA NA 0.59 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 3 0.02 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 2 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 3 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 4 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 5 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 6 34298680 40481488 3 13 91 0 1 0 2 10 0.3 0 4 0 0 4 4 4 8 8 8 24.36 68.81 31.05 0 1 2 Whitelist BRCA-EU 11 0.68 0 0 0 0.59 0 Linked to low confidence BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA Canonical without polyploidization 16 0.09 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 7 NA NA 0 0 91 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.48 NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 8 34589948 42947632 3 6 91 1 0 1 1 3 0.8 0.05 8 0 0 8 7 8 12 9 9 24.36 92.13 4.25 0 2 1 Whitelist BRCA-EU 0.68 0.17 0 0 0.84 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 9 0.05 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 9 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 10 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 11 67115970 94692580 52 65 91 9 18 11 14 13 0.32 0 72 0 0 72 6 6 74 6 6 24.36 56.22 40.02 4 8 4 Whitelist BRCA-EU 6 0.62 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA With other complex events 117 0.64 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 12 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 13 88264527 90001335 2 2 91 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 24.36 37.96 61.91 0 2 NA Whitelist BRCA-EU 0.68 1 0 0 0.64 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 14 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 15 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 16 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 17 17302511 63104345 1 1 91 1 0 0 0 0 0.39 0.1 1 0 NA NA NA NA NA NA NA 24.36 21.29 78.69 0 2 NA Whitelist BRCA-EU 0.62 0.27 0 NA 0.59 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 18 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 19 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 20 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 21 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 22 38945668 40728857 1 1 91 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.36 3.48 96.52 0 1 2 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1425260 X NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1425260 BRCA 0.8 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217952 CGP_donor_1425260 female no treatment NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 1 180438577 183487656 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 6 6 10.39 40.5 59.5 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 11 5 9 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 11 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 4 133426490 136183986 1 1 22 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 14 12 13 10.39 1.65 98.34 0 1 2 Whitelist BRCA-EU 0.62 0.86 NA NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 5 55568195 56161644 1 1 22 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA 9 3 5 10.39 0.54 96.79 0 1 2 Whitelist BRCA-EU 0.62 0.86 NA NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 6 108189935 109861688 1 1 22 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 4 4 10.39 63.33 33.69 0 0 1 Whitelist BRCA-EU 0.62 0.34 NA NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 7 158925698 158956516 1 1 22 0 0 0 1 0 0.39 0.11 1 0 NA NA NA NA 11 5 5 10.39 0.18 99.68 0 2 NA Whitelist BRCA-EU 0.62 0.29 0 NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 10 25583071 37632211 2 2 22 0 0 1 1 0 0.57 0.27 1 NA 0 NA NA NA NA NA NA 10.39 0 99.82 0 2 NA Whitelist BRCA-EU 0.68 0.51 NA 0 0.64 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 4 0.09 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 11 NA NA 0 0 22 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 10 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.07 0 NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 12 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 13 73397463 75860403 1 1 22 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 10.39 2.14 97 0 1 2 Whitelist BRCA-EU 0.62 0.77 NA NA 0.59 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 21 NA NA 0 0 22 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.47 NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 22 NA NA 0 0 22 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.47 NA NA NA 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451422 X 1457012 44224510 1 3 22 1 0 0 1 1 0.57 0.1 1 NA 0 NA NA NA NA NA NA 10.39 0 99.77 0 2 NA Whitelist BRCA-EU 0.87 0.26 NA 0 0.64 0 No BRCA-EU CGP_donor_1451422 BRCA 0.57 1.96 Breast-LobularCA NA 5 0.11 NA 2 BRCA-EU DO218488 CGP_donor_1451422 female alive chemotherapy unknown 48 NA NA Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 1 5565031 32201359 1 1 52 1 0 0 0 0 0.39 0.6 2 0 NA NA NA NA 7 5 5 83.26 89.31 10.69 0 2 4 Whitelist BRCA-EU 0.62 0.82 0 NA 0.59 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 2 0.02 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 2 NA NA 0 0 52 0 0 0 0 0 NA 0.45 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.69 0.02 NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 3 24683852 78903367 1 1 52 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 83.26 72.58 27.38 0 2 4 Whitelist BRCA-EU 0.62 0.51 NA NA 0.59 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 2 0.02 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 4 119632229 148810766 1 2 52 0 0 1 1 0 0.57 0.78 1 0 0 NA NA NA NA NA NA 83.26 99.78 0 0 3 NA Whitelist BRCA-EU 0.68 0.93 0 0 0.64 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 4 0.04 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 5 NA NA 0 0 52 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.93 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 6 79673105 87898001 1 1 52 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 83.26 95.04 4.81 0 2 3 Whitelist BRCA-EU 0.62 0.62 NA NA 0.59 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 2 0.02 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 7 64342985 86562149 1 2 52 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 83.26 99.76 0 0 4 NA Whitelist BRCA-EU 0.68 1 NA 0 0.64 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 4 0.04 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 8 NA NA 0 0 52 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.41 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 9 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 10 35613824 122432054 1 2 52 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 83.26 99.82 0 0 4 NA Whitelist BRCA-EU 0.68 1 NA 0 0.64 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 4 0.04 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 11 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 12 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 13 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 14 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 16 52961205 60316423 1 1 52 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA 6 3 6 83.26 41.49 53.98 0 2 6 Whitelist BRCA-EU 0.62 0.86 NA NA 0.59 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 2 0.02 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 17 17901920 60667439 19 19 52 4 2 6 7 0 0.38 0 37 0 0 37 6 11 40 6 12 83.26 69.07 26.5 0 4 5 Whitelist BRCA-EU 0.62 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS With other complex events 38 0.37 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 19 NA NA 0 0 52 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.52 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 22 NA NA 0 0 52 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.71 NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451426 X NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451426 BRCA 0.42 3.49 Breast-DCIS NA 0 0 NA 4 BRCA-EU DO220825 CGP_donor_1451426 female alive chemotherapy unknown 40 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-DCIS BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 1 75144890 104591726 1 1 39 1 0 0 0 0 0.39 0.23 2 0.01 NA NA NA NA 5 3 3 80.22 85.15 11.81 0 2 3 Whitelist BRCA-EU 0.62 0.46 0.01 NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 2 NA NA 0 0 39 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.79 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 3 NA NA 0 0 39 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.76 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 4 23515430 28683585 2 2 39 0 0 1 1 0 0.57 0.74 2 NA 0 NA NA NA 5 3 4 80.22 27.31 70.32 0 3 4 Whitelist BRCA-EU 0.68 0.91 NA 0 0.64 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 4 0.05 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 5 135585322 135866679 1 1 39 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 5 5 5 80.22 97.32 0 0 3 4 Whitelist BRCA-EU 0.62 0.12 0 NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 6 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 7 131345902 156650212 2 2 39 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 8 3 3 80.22 94.88 4.89 0 3 NA Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 4 0.05 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 8 NA NA 0 0 39 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.9 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 9 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 10 113879564 113898238 1 1 39 0 0 1 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 80.22 99.82 0 0 4 NA Whitelist BRCA-EU 0.62 0.27 NA NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 11 133629247 133643402 1 1 39 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 80.22 99.57 0 0 4 NA Whitelist BRCA-EU 0.62 0.68 NA NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 12 11983734 29549860 1 1 39 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 7 3 7 80.22 64.79 35.2 0 2 4 Whitelist BRCA-EU 0.62 0.68 NA NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 16 NA NA 0 0 39 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.52 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 17 NA NA 0 0 39 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.53 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 18 NA NA 0 0 39 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.52 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 19 3309563 3415867 1 1 39 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 80.22 99.68 0 0 4 NA Whitelist BRCA-EU 0.62 0 0 NA 0.59 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 2 0.03 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 20 36065021 36262299 2 2 39 0 0 1 1 0 0.57 0.2 1 NA 0 NA NA NA NA NA NA 80.22 99.07 0 0 4 NA Whitelist BRCA-EU 0.68 0.43 NA 0 0.64 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 4 0.05 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 21 NA NA 0 0 39 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.23 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1451427 X NA NA 0 0 39 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.69 NA NA NA 0 No BRCA-EU CGP_donor_1451427 BRCA 0.46 3.21 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218489 CGP_donor_1451427 female no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 1 25119400 27027895 2 12 331 0 1 0 1 10 0.57 0 3 0 0 NA NA NA 34 6 8 73.07 86.17 13.81 0 4 5 Whitelist BRCA-EU 1 0 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 14 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 2 81350895 234457223 4 10 331 2 1 1 0 6 0.57 0.23 14 0 0 14 7 12 23 8 16 73.07 95.2 4.69 0 4 2 Whitelist BRCA-EU 0.68 0.47 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 14 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA False positive; manually removed BRCA-EU::CGP_donor_1475200 3 5314284 59718173 4 8 331 1 1 1 1 4 1 0.04 12 0 0 12 3 7 25 4 7 73.07 87.9 9.04 0 4 1 Whitelist BRCA-EU 0.87 0.14 0 0 1 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 12 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 4 18193195 156811790 3 21 331 0 1 1 1 18 0.8 0.03 10 0 0 10 3 6 15 3 6 73.07 82.03 17.87 1 4 5 Whitelist BRCA-EU 0.95 0.1 0 0 0.84 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 24 0.04 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 5 93968127 134905646 3 3 331 1 1 0 1 0 0.8 0.91 7 0 0 7 3 5 13 3 5 73.07 99.86 0 0 3 1 Whitelist BRCA-EU 0.87 1 0 0 0.84 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 6 16058789 41282014 7 14 331 2 2 1 2 7 0.93 0 17 0 0 17 5 7 24 6 7 73.07 35.27 64.58 0 3 4 Whitelist BRCA-EU 0.81 0 0 0 0.95 0 Low confidence BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA With other complex events 21 0.03 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 7 38541052 142832525 2 2 331 0 0 1 1 0 0.57 0.9 10 0 0 10 5 5 19 5 9 73.07 97.44 0.01 0 4 5 Whitelist BRCA-EU 0.68 1 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 8 65423224 137617892 2 2 331 0 1 0 1 0 0.57 0.03 21 0 0 21 4 5 35 5 5 73.07 86.38 10.11 0 6 7 Whitelist BRCA-EU 0.68 0.12 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 9 100704810 106499539 2 9 331 0 1 0 1 7 0.57 0.09 4 0 0 4 4 4 13 4 4 73.07 87.26 12.04 0 3 5 Whitelist BRCA-EU 0.85 0.25 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 11 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 10 37204571 129573489 1 10 331 3 1 0 0 6 0.11 0.79 10 0 0 10 6 9 13 6 9 73.07 79.89 16.47 0 3 2 Whitelist BRCA-EU 6_7 0.86 0.94 0 0 0.48 0 Linked to low confidence BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA Canonical without polyploidization 14 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 11 2177218 35310402 1 3 331 0 2 0 0 1 0.11 0.3 5 0 0 5 3 3 12 3 4 73.07 42.81 56.77 0 4 2 Whitelist BRCA-EU 0.62 0.54 0 0 0.48 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 12 96871574 99237098 2 2 331 0 1 1 0 0 0.57 0 3 0 0 NA NA NA 33 5 10 73.07 86.76 9.56 0 7 8 Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 13 56751840 114234166 1 2 331 1 1 0 0 0 0.57 0.13 3 0 0 NA NA NA 6 5 5 73.07 0.36 98.83 0 2 3 Whitelist BRCA-EU 0.68 0.32 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 14 38335158 38348920 1 1 331 1 0 0 0 0 0.39 0.35 1 0 NA NA NA NA 5 0 0 73.07 64.74 34.34 0 6 NA Whitelist BRCA-EU 0.62 0.6 0 NA 0.59 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 2 0 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 15 44565948 99409510 1 9 331 1 2 0 0 6 0.3 0.31 9 0 0 9 4 9 14 4 8 73.07 82.72 12.38 0 4 5 Whitelist BRCA-EU 6 0.85 0.57 0 0 0.59 0 Linked to low confidence BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA With other complex events 12 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 16 14695853 68773145 1 3 331 2 0 0 0 1 0.11 0.73 7 0 0 7 3 5 14 3 7 73.07 60.72 34.74 0 3 4 Whitelist BRCA-EU 0.62 0.91 0 0 0.48 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 17 37892349 71093909 1 12 331 2 4 0 1 5 0.17 0.01 16 0 0 16 3 10 19 4 10 73.07 87.17 12.79 0 8 6 Whitelist BRCA-EU 0.62 0.03 0 0 0.59 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 19 0.03 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 18 26469652 26605930 1 1 331 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 4 3 3 73.07 99.96 0 0 4 6 Whitelist BRCA-EU 0.62 0.47 0 NA 0.59 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 2 0 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 19 13795174 36336167 1 2 331 1 1 0 0 0 0.57 0.16 5 0 0 5 0 3 15 5 8 73.07 92.72 0 0 5 3 Whitelist BRCA-EU 0.68 0.37 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 20 31383649 46560717 1 3 331 2 0 0 0 1 0.11 0.85 5 0 0 5 4 5 7 4 4 73.07 52.33 40.57 0 4 5 Whitelist BRCA-EU 0.41 0.98 0 0 0.48 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 21 21848431 24146811 2 2 331 1 1 0 0 0 0.57 0.61 1 0 0 NA NA NA NA NA NA 73.07 75.8 1.55 0 3 NA Whitelist BRCA-EU 0.68 0.82 0 0 0.64 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 22 43333493 43533110 1 2 331 0 1 0 0 1 0.39 0.6 3 0 NA NA NA NA 5 4 4 73.07 84.85 15.15 0 2 4 Whitelist BRCA-EU 0.54 0.82 0 NA 0.59 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 3 0 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475200 X 25909260 142610858 1 6 331 4 0 1 0 1 0.04 0.31 12 0 0 12 5 12 15 6 15 73.07 39.25 57.36 0 2 4 Whitelist BRCA-EU 0.54 0.56 0 0 0.36 0 No BRCA-EU CGP_donor_1475200 BRCA 0.6 3.69 Breast-AdenoCA NA 11 0.02 NA 4 BRCA-EU DO218333 CGP_donor_1475200 female alive chemotherapy unknown 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 1 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 2 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 3 NA NA 0 0 45 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.62 NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 4 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 5 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 6 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 7 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 8 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 9 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 10 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 11 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 12 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 13 81313916 114454357 6 17 45 0 1 3 2 11 0.34 0 26 0 0 26 5 5 31 5 8 8.86 69.51 29.86 0 6 1 Whitelist BRCA-EU 0.93 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA With other complex events 23 0.26 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 14 100743671 105780915 6 8 45 2 1 2 1 2 0.88 0 7 0 0 7 0 5 24 7 12 8.86 63.97 35.71 0 6 3 Whitelist BRCA-EU 0.87 0 0 0 0.91 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 14 0.16 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 16 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 17 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 19 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475201 X NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1475201 BRCA 0.76 2.06 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218553 CGP_donor_1475201 female alive chemotherapy unknown 59 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 1 80341830 241765599 10 31 217 1 2 6 1 21 0.08 0 27 0 0 27 14 18 33 14 18 79.83 97.03 0 0 6 5 Whitelist BRCA-EU 0.68 0 0 0 0.48 1 High confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA With other complex events 41 0.09 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 2 NA NA 0 0 217 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 3 4105086 194006757 31 58 217 15 7 6 3 27 0.02 0 48 0 0 48 7 21 49 7 8 79.83 67.29 29.57 5 4 3 Whitelist BRCA-EU 19 0.48 0 0 0 0.31 1 High confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA With other complex events 89 0.21 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 4 44897680 94849273 12 28 217 3 2 4 3 16 0.88 0 5 0 0 5 4 5 13 6 6 79.83 97.62 0 0 3 4 Whitelist BRCA-EU 1 0.9 0 0 0 0.91 1 Low confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA After polyploidization 40 0.09 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 5 NA NA 0 0 217 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 6 152153801 152222783 1 1 217 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 79.83 99.85 0 0 3 4 Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 7 8316244 16409139 12 12 217 0 3 5 4 0 0.2 0 13 0 0 13 9 13 26 10 15 79.83 71.71 24.96 2 3 4 Whitelist BRCA-EU 0.62 0.01 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA After polyploidization 24 0.06 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 8 36138915 47711286 2 2 217 0 2 0 0 0 0.11 0.06 3 0 0 NA NA NA 6 3 3 79.83 96.36 0 5 1 4 Whitelist BRCA-EU 0.54 0.19 0 0 0.48 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 9 NA NA 0 0 217 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.02 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 10 NA NA 0 0 217 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 11 71587582 77220560 1 2 217 0 1 1 0 0 0.57 0.02 5 NA 0 5 5 5 8 8 8 79.83 50.15 46.38 0 2 4 Whitelist BRCA-EU 0.68 0.06 NA 0 0.64 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 12 89302895 108838113 17 17 217 3 5 6 3 0 0.66 0 29 0 0 29 5 6 40 5 7 79.83 77.36 22.56 11 8 10 Whitelist BRCA-EU 0.77 0 0 0 0.74 1 Low confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA With other complex events 34 0.08 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 13 NA NA 0 0 217 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.04 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 14 45268024 45366881 1 1 217 0 1 0 0 0 0.39 0.17 1 0 NA NA NA NA NA NA NA 79.83 21.68 77.41 0 2 NA Whitelist BRCA-EU 0.62 0.39 0 NA 0.59 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 15 NA NA 0 0 217 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.13 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 16 NA NA 0 0 217 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.12 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 17 46521066 46716709 1 1 217 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 79.83 68.22 27.33 0 6 7 Whitelist BRCA-EU 0.62 0.33 NA NA 0.59 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 18 NA NA 0 0 217 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.12 NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 19 4796337 21735946 7 32 217 3 6 3 2 18 0.46 0 16 0 0 16 6 9 28 7 7 79.83 87.81 4.91 0 6 5 Whitelist BRCA-EU 3 0.92 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA With other complex events 46 0.11 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 20 6160961 7214437 2 2 217 0 0 1 1 0 0.57 0.24 5 0 0 5 3 5 13 3 7 79.83 92.97 0 2 5 6 Whitelist BRCA-EU 0.68 0.48 0 0 0.64 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 21 NA NA 0 0 217 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 22 29113792 29279763 1 1 217 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 79.83 100 0 0 3 6 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1475202 X 136156908 148684615 1 3 217 1 0 1 0 1 0.57 0.28 2 0 0 NA NA NA 5 3 3 79.83 99.77 0 0 4 5 Whitelist BRCA-EU 0.87 0.52 0 0 0.64 1 No BRCA-EU CGP_donor_1475202 BRCA 0.87 3.64 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 BRCA-EU DO220828 CGP_donor_1475202 female alive chemotherapy unknown 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 1 NA NA 0 0 161 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 2 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 3 24341426 76090407 19 29 161 6 3 5 5 10 0.8 0 13 0 0 13 7 7 20 8 8 58.53 23.84 76.03 0 1 2 Whitelist BRCA-EU 7 0.8 0 0 0 0.84 1 High confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA With other complex events 48 0.15 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 4 170093198 170117095 1 1 161 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 4 4 58.53 95.67 4.13 0 3 4 Whitelist BRCA-EU 0.62 0.05 NA NA 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 5 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 6 54249633 158650931 1 8 161 3 0 0 2 3 0.14 0.74 11 0 0 11 5 5 13 5 6 58.53 24.96 74.86 0 2 1 Whitelist BRCA-EU 0.87 0.91 0 0 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 13 0.04 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 7 88812878 106064288 2 12 161 2 0 0 0 10 0.11 0.08 8 0 0 8 5 7 8 5 7 58.53 95.92 3.84 0 3 2 Whitelist BRCA-EU 3 0.62 0.22 0 0 0.48 1 Linked to high confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA Canonical without polyploidization 14 0.04 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 8 36316585 58193474 9 28 161 2 1 3 3 19 0.75 0 24 0 0 24 5 5 31 5 5 58.53 70.71 25.87 0 4 8 Whitelist BRCA-EU 11 0.54 0 0 0 0.83 1 Low confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA With other complex events 37 0.11 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 9 NA NA 0 0 161 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.09 NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 10 27542360 37757254 1 1 161 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 58.53 99.83 0 0 3 NA Whitelist BRCA-EU 0.62 0.04 NA NA 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 11 57620337 81529411 20 40 161 7 6 4 3 20 0.57 0 53 0 0 53 5 7 58 5 7 58.53 6.16 93.42 6 8 2 Whitelist BRCA-EU 8 0.81 0 0 0 0.64 1 Low confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA With other complex events 60 0.19 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 12 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 13 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 14 37444009 62292108 7 8 161 1 4 2 0 1 0.17 0.01 12 0 0 12 12 12 15 13 13 58.53 80.41 0.88 0 3 4 Whitelist BRCA-EU 0.62 0.03 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA After polyploidization 15 0.05 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 15 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 16 57046331 57776210 1 1 161 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 58.53 99.1 0.81 1 2 3 Whitelist BRCA-EU 0.62 0.33 NA NA 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 17 NA NA 0 0 161 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.59 NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 18 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 19 3614406 5021855 1 4 161 2 0 0 1 1 0.3 0.56 4 0 0 4 4 4 4 4 4 58.53 92.56 7.27 0 2 3 Whitelist BRCA-EU 0.68 0.79 0 0 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 7 0.02 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 20 7490391 60291793 12 13 161 0 4 4 4 1 0.26 0 31 0 0 31 8 8 32 8 8 58.53 86.86 12.69 0 8 9 Whitelist BRCA-EU 0.68 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA With other complex events 25 0.08 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 21 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 0 0 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 22 42095632 46901299 1 1 161 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA 7 3 3 58.53 100 0 0 1 3 Whitelist BRCA-EU 0.62 0.69 NA NA 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503014 X 7454579 7895967 1 1 161 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 58.53 0 99.77 0 2 NA Whitelist BRCA-EU 0.62 0.03 NA NA 0.59 1 No BRCA-EU CGP_donor_1503014 BRCA 0.48 2.97 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-EU DO218573 CGP_donor_1503014 female alive chemotherapy unknown 48 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 1 88581267 154459561 1 2 72 1 1 0 0 0 0.57 1 7 0 0 7 4 7 11 4 9 27.63 61.21 38.79 0 2 3 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 2 242435116 242649395 2 2 72 0 0 1 1 0 0.57 0.28 4 0 0 4 4 4 5 5 5 27.63 0.08 99.82 0 1 2 Whitelist BRCA-EU 0.68 0.53 0 0 0.64 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 3 88713175 180368925 1 2 72 0 0 0 1 1 0.39 0.49 4 NA NA 4 4 4 5 5 5 27.63 26.05 70.78 0 1 2 Whitelist BRCA-EU 0.68 0.73 NA NA 0.59 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 3 0.02 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 4 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 5 NA NA 0 0 72 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.33 NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 6 70321603 92182155 8 9 72 2 2 2 2 1 1 0 13 0 0 13 13 13 21 15 15 27.63 55.43 44.44 0 1 2 Whitelist BRCA-EU 0.97 0 0 0 1 1 High confidence BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA Canonical without polyploidization 17 0.12 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 7 145885262 145914285 1 1 72 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 27.63 0 99.77 0 2 NA Whitelist BRCA-EU 0.62 0.41 NA NA 0.59 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 8 34241653 38525420 2 2 72 1 1 0 0 0 0.57 0 4 0 0 4 0 3 13 4 4 27.63 95.69 0.75 0 2 3 Whitelist BRCA-EU 0.68 0.02 0 0 0.64 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 9 80206146 80336454 1 1 72 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 27.63 29.32 70.01 0 2 3 Whitelist BRCA-EU 0.62 0.76 NA NA 0.59 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 10 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 11 67121530 83614852 7 7 72 1 1 3 2 0 0.67 0.02 14 0 0 14 5 12 16 5 12 27.63 46.36 53.24 0 4 3 Whitelist BRCA-EU 0.77 0.08 0 0 0.74 1 Low confidence BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA With other complex events 14 0.1 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 12 NA NA 0 0 72 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.51 NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 13 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 14 36845600 40271766 4 5 72 0 1 1 2 1 0.57 0 2 0 0 NA NA NA 15 5 8 27.63 76.17 22.92 0 3 4 Whitelist BRCA-EU 0.93 0 0 0 0.64 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 9 0.06 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 15 57724305 67640218 4 4 72 1 2 0 1 0 0.57 0 6 0 0 6 6 6 19 12 12 27.63 40.95 59.05 0 3 4 Whitelist BRCA-EU 0.68 0 0 0 0.64 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 8 0.06 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 16 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 17 NA NA 0 0 72 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.69 NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 18 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 19 947943 45638640 1 2 72 0 2 0 0 0 0.11 0.65 4 NA 0.04 4 3 4 5 3 5 27.63 0.39 99.44 0 2 3 Whitelist BRCA-EU 0.54 0.86 NA 0.04 0.48 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 20 21878692 34475246 1 1 72 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.63 79.02 19.99 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 21 NA NA 0 0 72 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.81 NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503016 X 32481304 32544625 1 1 72 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 27.63 28.05 71.72 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1503016 BRCA 0.54 2.1 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217865 CGP_donor_1503016 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 8 NA NA 0 0 3 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.04 NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 16 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0 NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503017 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503017 BRCA 0.45 2.03 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218072 CGP_donor_1503017 female alive chemotherapy unknown 38 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 1 NA NA 0 0 23 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.9 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 2 NA NA 0 0 23 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.9 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 3 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 4 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 5 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 6 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 7 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 8 NA NA 0 0 23 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.58 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 9 83959278 84097159 1 1 23 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA 4 3 3 92.49 92.74 6.52 0 3 4 Whitelist BRCA-EU 0.62 0.46 NA NA 0.59 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 2 0.04 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 10 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 11 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 12 100546480 100667453 1 1 23 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 4 4 92.49 99.92 0 0 3 4 Whitelist BRCA-EU 0.62 0.25 NA NA 0.59 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 2 0.04 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 14 106550914 106924779 1 1 23 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 92.49 99.6 0 0 5 NA Whitelist BRCA-EU 0.62 0.37 NA NA 0.59 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 2 0.04 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 16 NA NA 0 0 23 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.71 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 17 10765442 29120694 5 5 23 1 1 2 1 0 0.9 0 18 0 0 18 8 9 24 8 9 92.49 64.92 30.01 0 2 0 Whitelist BRCA-EU 0.93 0 0 0 0.92 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 10 0.22 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 18 NA NA 0 0 23 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.32 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 19 NA NA 0 0 23 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.62 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 22 NA NA 0 0 23 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.11 NA NA NA 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 0 0 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503019 X 139352798 139991446 1 1 23 0 0 0 1 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 92.49 99.77 0 0 3 4 Whitelist BRCA-EU 0.62 0.58 NA NA 0.59 0 No BRCA-EU CGP_donor_1503019 BRCA 0.4 3.89 Breast-AdenoCA NA 2 0.04 NA 4 BRCA-EU DO218560 CGP_donor_1503019 female alive chemotherapy unknown 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 1 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 2 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 3 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 4 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 5 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 6 316116 362979 1 1 45 0 0 0 1 0 0.39 0.75 1 NA NA NA NA NA NA NA NA 14.6 99.85 0 0 1 NA Whitelist BRCA-EU 0.62 0.92 NA NA 0.59 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 7 23638008 149260298 25 33 45 3 5 8 9 8 0.3 0 34 0 0 34 13 17 36 15 19 14.6 93.71 6.06 0 2 3 Whitelist BRCA-EU 0.87 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA With other complex events 58 0.64 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 8 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 9 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 10 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 11 44127671 44388750 1 1 45 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.6 0 99.57 0 2 NA Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 12 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 13 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 14 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 16 NA NA 0 0 45 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 0 NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 17 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 19 NA NA 0 0 45 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.81 NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 22 46506589 47232351 1 1 45 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 4 14.6 88.89 0 0 0 1 Whitelist BRCA-EU 0.62 0.07 NA NA 0.59 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503020 X NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503020 BRCA 0.74 1.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218384 CGP_donor_1503020 female alive chemotherapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 2 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 5 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 8 40007998 68152217 4 5 25 1 0 2 1 1 0.57 0 3 0 0 NA NA NA 10 6 9 11.31 99.99 0 0 4 5 Whitelist BRCA-EU 0.68 0 0 0 0.64 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 9 0.18 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 11 23297029 116832258 1 4 25 2 0 1 1 0 0.57 0.03 4 0 0 4 3 4 5 3 3 11.31 49.44 50.13 0 2 1 Whitelist BRCA-EU 0.68 0.1 0 0 0.64 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 8 0.16 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 12 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 16 46993430 84786026 8 11 25 1 1 2 4 3 0.39 0 9 0 0 9 6 7 12 7 8 11.31 99.89 0 0 1 4 Whitelist BRCA-EU 0.74 0 0 0 0.59 0 Low confidence BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA Before polyploidization 19 0.38 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503021 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503021 BRCA 0.67 2.05 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218583 CGP_donor_1503021 female alive chemotherapy unknown 63 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 1 59848042 59983686 1 1 19 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 10.07 42.59 57.41 0 1 2 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 4 NA NA 0 0 19 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.12 NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 8 128277684 128576730 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.07 0.2 99.79 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 10 89600002 90520173 1 1 19 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 10.07 0.68 99.14 0 1 2 Whitelist BRCA-EU 0.62 0.81 NA NA 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 11 100449488 125497268 1 1 19 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 10.07 18.55 81.01 0 1 2 Whitelist BRCA-EU 0.62 0.81 NA NA 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 12 52351391 53238623 1 3 19 2 0 0 0 1 0.11 0.01 4 0 0 4 4 4 5 5 5 10.07 1.28 98.64 0 1 2 Whitelist BRCA-EU 0.62 0.05 0 0 0.48 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 5 0.13 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 17 16116699 16203971 1 1 19 0 0 1 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 10.07 99.98 0 0 1 NA Whitelist BRCA-EU 0.62 0.25 NA NA 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 2 0.05 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 21 36949247 39766953 1 5 19 0 1 0 0 4 0.39 0 6 0 0 6 6 6 9 9 9 10.07 10.98 66.37 0 1 2 Whitelist BRCA-EU 0.68 0 0 0 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 6 0.16 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 0 0 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503140 X 109448944 109527979 3 3 19 2 1 0 0 0 0.3 0.01 4 0 0 4 4 4 5 5 5 10.07 0.05 99.73 1 1 2 Whitelist BRCA-EU 0.62 0.06 0 0 0.59 0 No BRCA-EU CGP_donor_1503140 BRCA 0.44 1.97 Breast-LobularCA NA 6 0.16 NA 2 BRCA-EU DO218377 CGP_donor_1503140 female alive other therapy 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-LobularCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 1 225810537 235530436 3 3 180 1 0 1 1 0 0.8 0.49 6 0 0 6 6 6 17 11 11 32.09 27.92 72.08 0 2 3 Whitelist BRCA-EU 0.87 0.73 0 0 0.84 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 2 135246921 229746618 2 3 180 1 0 1 0 1 0.57 0.06 1 0 0 NA NA NA 7 7 7 32.09 1.34 98.55 11 2 NA Whitelist BRCA-EU 0.62 0.18 0 0 0.64 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 3 175252560 194564990 2 4 180 0 1 1 2 0 0.57 0.24 8 0 0 8 7 8 12 7 7 32.09 47.26 49.59 2 2 1 Whitelist BRCA-EU 0.68 0.48 0 0 0.64 1 Linked to low confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA Canonical without polyploidization 8 0.02 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 4 31802737 183234503 5 8 180 0 1 2 2 3 0.53 0.76 8 0 0 8 8 8 9 9 9 32.09 5.39 94.59 0 1 2 Whitelist BRCA-EU 0.62 0.93 0 0 0.64 1 High confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA Canonical without polyploidization 13 0.04 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 5 2040289 5090811 1 1 180 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 32.09 1.69 98.17 0 1 2 Whitelist BRCA-EU 0.62 0 NA NA 0.59 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 6 3658692 44465119 21 26 180 4 5 6 6 5 0.91 0 18 0 0 18 6 9 20 6 6 32.09 30.19 69.66 0 3 4 Whitelist BRCA-EU 3 0.82 0 0 0 0.94 1 Low confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA With other complex events 47 0.13 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 7 NA NA 0 0 180 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.01 NA NA NA 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 8 36031131 90557044 8 11 180 2 4 1 1 3 0.39 0 19 0 0 19 4 7 29 8 8 32.09 95.92 0.66 0 3 4 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 Low confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA With other complex events 19 0.05 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 9 39057376 124602440 1 2 180 2 0 0 0 0 0.11 0.05 2 NA 0 NA NA NA NA NA NA 32.09 33.44 63.43 0 1 2 Whitelist BRCA-EU 0.54 0.17 NA 0 0.48 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 10 55871053 56354101 1 1 180 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 32.09 0.67 99.15 1 2 NA Whitelist BRCA-EU 0.62 0.21 NA NA 0.59 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 11 50025978 132761947 2 7 180 0 1 3 2 1 0.34 0.01 18 0 0 18 5 5 22 6 6 32.09 47.41 52.51 0 1 2 Whitelist BRCA-EU 0.62 0.03 0 0 0.59 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 13 0.04 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 12 17551560 41491454 1 2 180 0 1 0 1 0 0.57 0.05 3 0 0 NA NA NA NA NA NA 32.09 0.69 99.23 0 2 3 Whitelist BRCA-EU 0.68 0.17 0 0 0.64 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 13 57920742 114632856 6 7 180 0 1 3 2 1 0.34 0 12 0 0 12 11 12 19 11 11 32.09 66.07 33.46 0 1 2 Whitelist BRCA-EU 0.62 0 0 0 0.59 1 High confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA Canonical without polyploidization 13 0.04 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 14 32137072 105354274 1 3 180 1 0 0 1 1 0.57 1 3 0 0 NA NA NA NA NA NA 32.09 0 99.08 0 2 1 Whitelist BRCA-EU 0.87 1 0 0 0.64 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 15 51839362 77279909 1 2 180 1 1 0 0 0 0.57 0.5 4 0 0 4 3 4 5 3 3 32.09 99.55 0.35 0 1 0 Whitelist BRCA-EU 0.68 0.74 0 0 0.64 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 16 27220921 69834320 1 2 180 0 1 1 0 0 0.57 1 4 0 0 4 4 4 6 5 5 32.09 11 88.9 0 2 3 Whitelist BRCA-EU 0.68 1 0 0 0.64 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 17 NA NA 0 0 180 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.85 NA NA NA 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 18 69800075 70019054 1 1 180 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 32.09 0.28 99.68 0 1 2 Whitelist BRCA-EU 0.62 0.26 NA NA 0.59 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 19 6471749 14092495 5 15 180 1 2 1 1 10 0.9 0 7 0 0 7 7 7 16 14 14 32.09 23.23 76.6 0 2 1 Whitelist BRCA-EU 0.93 0 0 0 0.92 1 High confidence BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA Canonical without polyploidization 20 0.06 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 20 1860728 2112183 3 3 180 0 1 1 1 0 0.8 0 3 0 0 NA NA NA 14 7 7 32.09 43.04 55.97 0 2 3 Whitelist BRCA-EU 0.87 0 0 0 0.84 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 21 NA NA 0 0 180 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 22 17755289 17877222 1 2 180 0 0 1 0 1 0.39 0.17 1 NA NA NA NA NA NA NA NA 32.09 65.01 34.99 0 2 NA Whitelist BRCA-EU 0.68 0.38 NA NA 0.59 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 3 0.01 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503150 X 93422133 135067337 1 4 180 2 0 0 0 2 0.11 0.06 5 0 0 5 4 5 15 11 11 32.09 87.94 12.06 0 1 2 Whitelist BRCA-EU 0.54 0.18 0 0 0.48 1 No BRCA-EU CGP_donor_1503150 BRCA 0.82 1.98 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-EU DO217931 CGP_donor_1503150 female alive chemotherapy unknown 58 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 1 NA NA 0 0 66 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.73 NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 2 11061969 12226857 1 1 66 1 0 0 0 0 0.39 0.66 2 0.01 NA NA NA NA NA NA NA 29.61 0.48 99.43 0 1 2 Whitelist BRCA-EU 0.62 0.87 0.01 NA 0.59 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 3 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 4 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 5 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 6 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 7 NA NA 0 0 66 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.51 NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 8 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 9 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 10 8980824 9301372 1 1 66 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 29.61 0.24 99.59 0 2 3 Whitelist BRCA-EU 0.62 0.63 NA NA 0.59 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 11 62861548 75560049 5 9 66 2 0 2 1 4 0.53 0 12 0 0 12 4 9 19 5 5 29.61 49.11 50.46 7 1 2 Whitelist BRCA-EU 0.85 0 0 0 0.64 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 14 0.11 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 12 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 13 25726824 26348849 2 2 66 0 0 1 1 0 0.57 0 4 0 0 4 4 4 20 7 7 29.61 8.71 91.29 0 3 6 Whitelist BRCA-EU 0.68 0 0 0 0.64 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 14 37987092 39752022 1 1 66 0 1 0 0 0 0.39 0.47 2 0 NA NA NA NA NA NA NA 29.61 1.64 97.44 0 2 3 Whitelist BRCA-EU 0.62 0.71 0 NA 0.59 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 15 23149223 92319473 19 19 66 2 9 5 3 0 0.11 0 40 0 0 40 14 16 42 14 14 29.61 93.27 1.85 0 3 1 Whitelist BRCA-EU 0.54 0 0 0 0.48 1 High confidence BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA With other complex events 38 0.29 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 16 NA NA 0 0 66 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 0.89 NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 17 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA 1 NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 18 29916751 30513524 1 1 66 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.61 0.76 99.2 0 2 3 Whitelist BRCA-EU 0.62 1 NA NA 0.59 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 19 5116767 20267647 1 2 66 0 1 0 1 0 0.57 0.37 5 NA 0 5 5 5 8 7 7 29.61 16.07 83.76 0 2 3 Whitelist BRCA-EU 0.68 0.63 NA 0 0.64 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 20 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 22 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-EU NA NA NA NA NA 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 0 0 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-EU::CGP_donor_1503156 X 83389712 126757650 1 3 66 1 2 0 0 0 0.3 1 6 0 0 6 4 6 9 7 7 29.61 2.24 97.54 0 2 3 Whitelist BRCA-EU 0.62 1 0 0 0.59 1 No BRCA-EU CGP_donor_1503156 BRCA 0.54 1.82 Breast-AdenoCA NA 6 0.05 NA 2 BRCA-EU DO218159 CGP_donor_1503156 female alive chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA EU 0 NA BRCA-UK::CGP_donor_1069291 1 161502976 209894829 2 4 277 1 1 0 0 2 0.57 0 16 0 0 16 3 5 45 8 8 51.57 76.51 23.48 0 4 2 Whitelist BRCA-UK 0.62 0 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 2 30546371 228922869 1 11 277 1 10 0 0 0 0 0.13 22 0 0 22 9 9 23 10 10 51.57 79.89 17.41 0 2 1 Whitelist BRCA-UK 0 0.32 0 0 0 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 3 25369698 171364498 1 14 277 3 7 0 0 4 0 0.55 24 0 0 24 9 24 26 9 9 51.57 18.05 81.91 0 2 1 Whitelist BRCA-UK 16_4 0.62 0.78 0 0 0.14 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 4 8422642 148091142 1 8 277 0 3 0 0 5 0.03 0.63 13 0 0 13 6 6 18 10 10 51.57 55.96 43.83 0 2 3 Whitelist BRCA-UK 0.62 0.84 0 0 0.33 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 5 3967851 147451120 1 9 277 2 5 0 0 2 0.02 0.71 15 0 0 15 9 13 17 10 14 51.57 84.43 12.91 0 2 1 Whitelist BRCA-UK 0.54 0.9 0 0 0.33 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 6 47829394 48193168 2 2 277 0 0 1 1 0 0.57 0.16 1 0 0 NA NA NA 16 8 8 51.57 5.74 94.01 0 2 NA Whitelist BRCA-UK 0.68 0.37 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 7 17807891 62028895 1 4 277 1 1 0 0 2 0.57 0.89 12 0 0 12 7 12 16 7 7 51.57 60.64 36.81 0 2 3 Whitelist BRCA-UK 10 1 1 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 8 128546599 128727823 2 2 277 0 1 0 1 0 0.57 0.13 4 0 0 4 0 3 25 5 5 51.57 57.97 41.75 0 5 6 Whitelist BRCA-UK 0.68 0.32 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 9 5708472 139764150 1 8 277 0 7 0 0 1 0 0.64 15 0 0 15 6 15 16 6 6 51.57 29.37 69.93 0 2 3 Whitelist BRCA-UK 0.06 0.85 0 0 0.01 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 10 5583614 134866370 1 16 277 2 4 1 2 7 0.55 0 30 0 0 30 9 19 31 9 9 51.57 46.16 53.66 0 2 1 Whitelist BRCA-UK 7 0.79 0 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 25 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 11 78334627 127318439 1 4 277 1 3 0 0 0 0.11 0.57 5 0 0 5 3 5 13 6 6 51.57 49.33 50.25 0 3 2 Whitelist BRCA-UK 0.54 0.79 0 0 0.48 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 12 15004910 63096553 1 3 277 1 1 0 0 1 0.57 0.78 8 0 0 8 5 8 12 6 6 51.57 67.62 32.3 0 2 1 Whitelist BRCA-UK 0.87 0.93 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 13 48912733 48936155 1 1 277 0 1 0 0 0 0.39 0.18 2 0 NA NA NA NA 4 4 4 51.57 62.89 37.11 0 1 2 Whitelist BRCA-UK 0.62 0.4 0 NA 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 14 23497943 75621029 1 8 277 0 8 0 0 0 0 0.08 14 0 0 14 10 14 17 10 10 51.57 91.58 7.51 0 2 1 Whitelist BRCA-UK 0.01 0.23 0 0 0 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 15 NA NA 0 0 277 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.7 0 NA NA 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 16 12168327 88358523 1 12 277 1 4 1 1 5 0.28 0 24 0 0 24 8 16 26 8 8 51.57 24.77 75.12 1 3 4 Whitelist BRCA-UK 3 0.62 0 0 0 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 17 80830799 81088593 2 2 277 1 0 1 0 0 0.57 0.01 2 0 0 NA NA NA 14 7 7 51.57 94.01 5.85 0 2 3 Whitelist BRCA-UK 0.68 0.06 0 0 0.64 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 18 32272466 32830617 1 1 277 0 1 0 0 0 0.39 0.85 2 0 NA NA NA NA 8 3 4 51.57 7.24 86.97 0 2 3 Whitelist BRCA-UK 0.62 0.99 0 NA 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 19 19431368 58793854 1 2 277 0 2 0 0 0 0.11 0.19 5 NA 0 5 5 5 8 8 8 51.57 37.86 61.4 0 2 1 Whitelist BRCA-UK 0.54 0.41 NA 0 0.48 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 20 19843318 19981963 1 1 277 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 51.57 0.22 98.79 0 2 3 Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 21 NA NA 0 0 277 0 0 0 0 0 NA 0.4 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.65 0 NA NA 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 22 21327130 21339548 1 1 277 0 0 0 1 0 0.39 0.58 1 NA NA NA NA NA 4 3 3 51.57 42.48 57.52 0 2 NA Whitelist BRCA-UK 0.62 0.8 NA NA 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1069291 X 2974521 77121074 1 5 277 1 2 0 0 2 0.3 0.05 3 0 0 NA NA NA 4 3 4 51.57 34.24 65.53 0 2 0 Whitelist BRCA-UK 3 0.93 0.17 0 0 0.59 0 No BRCA-UK CGP_donor_1069291 BRCA 0.46 1.81 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 BRCA-UK DO1001 CGP_donor_1069291 female other therapy 41 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 1 22122753 211638884 1 11 249 4 4 0 1 2 0.13 0.81 11 0 0 11 5 11 13 5 5 30.68 17.84 82.16 0 2 1 Whitelist BRCA-UK 0.68 0.96 0 0 0.55 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 20 0.04 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 2 10003868 20609343 1 1 249 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA NA NA NA 30.68 4.36 95.53 0 2 3 Whitelist BRCA-UK 0.62 0.09 0 NA 0.59 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 3 113624433 185086633 1 5 249 4 0 1 0 0 0.04 0.21 10 0 0 10 9 10 12 9 9 30.68 9.81 90.07 0 2 1 Whitelist BRCA-UK 0.45 0.44 0 0 0.36 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 4 21782110 172431183 1 6 249 2 0 1 0 3 0.3 0.1 4 0 0 4 3 4 5 3 3 30.68 0.02 99.96 0 2 1 Whitelist BRCA-UK 0.62 0.26 0 0 0.59 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 9 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 5 165962406 173638667 5 5 249 1 1 2 1 0 0.9 0.9 9 0 0 9 5 5 13 5 8 30.68 57.91 41.97 7 3 4 Whitelist BRCA-UK 0.93 1 0 0 0.92 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 6 65175120 68525092 1 5 249 0 1 1 1 2 0.8 1 4 0 0 4 4 4 6 6 6 30.68 85.14 14.72 0 1 2 Whitelist BRCA-UK 0.68 1 0 0 0.84 0 Linked to low confidence BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA Canonical without polyploidization 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 7 2525615 57789460 1 5 249 2 1 0 0 2 0.3 0.26 2 0 0 NA NA NA 4 4 4 30.68 0.52 99.26 0 1 2 Whitelist BRCA-UK 0.93 0.5 0 0 0.59 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 8 31373451 72632912 39 47 249 9 7 11 12 8 0.68 0 60 0 0 60 4 13 65 4 13 30.68 95.55 0.69 13 3 4 Whitelist BRCA-UK 6 0.62 0 0 0 0.76 0 Low confidence BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA With other complex events 86 0.17 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 9 2171950 136961683 1 6 249 4 2 0 0 0 0.06 0.74 10 0 0 10 6 10 11 7 7 30.68 0.1 99.2 0 2 1 Whitelist BRCA-UK 0.54 0.91 0 0 0.48 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 10 17464930 97184502 6 6 249 1 1 2 2 0 0.88 0.55 12 0 0 12 6 10 13 6 6 30.68 52.18 47.64 0 2 3 Whitelist BRCA-UK 0.93 0.77 0 0 0.91 0 Low confidence BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA With other complex events 12 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 11 20541575 31318224 8 8 249 3 3 1 1 0 0.57 0 1 0 0 NA NA NA 15 3 3 30.68 81.9 17.67 2 2 NA Whitelist BRCA-UK 0.68 0.02 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 16 0.03 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 12 13536846 127640814 1 5 249 1 0 1 1 2 0.8 0.23 1 0 0 NA NA NA NA NA NA 30.68 0.02 99.9 0 2 NA Whitelist BRCA-UK 0.68 0.46 0 0 0.84 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 13 54977262 67772054 2 4 249 2 1 0 1 0 0.57 0.38 9 0 0 9 6 9 11 7 11 30.68 83.28 16.72 0 1 3 Whitelist BRCA-UK 0.68 0.63 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 14 63094074 105541855 2 2 249 1 0 1 0 0 0.57 0.86 4 0 0 4 4 4 7 5 5 30.68 39.64 59.45 0 1 2 Whitelist BRCA-UK 0.68 0.99 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 15 27615153 79111927 1 4 249 3 0 0 0 1 0.03 0.08 6 0 0 6 4 5 9 4 5 30.68 40.78 59.09 0 2 3 Whitelist BRCA-UK 0.54 0.22 0 0 0.33 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 16 6840446 6852675 2 2 249 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 5 3 3 30.68 0.03 99.96 0 2 NA Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 17 47678958 65524289 1 5 249 1 2 0 0 2 0.3 0.56 4 0 0 4 3 4 7 3 5 30.68 79.42 20.56 0 3 4 Whitelist BRCA-UK 0.93 0.78 0 0 0.59 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 18 25809650 54080838 2 6 249 2 0 0 0 4 0.11 0 7 0 0 7 3 5 15 3 5 30.68 41.22 54.13 0 1 2 Whitelist BRCA-UK 13 0.62 0.02 0 0 0.48 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 19 56548951 56561085 1 1 249 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA NA NA NA 30.68 0.02 99.81 0 1 2 Whitelist BRCA-UK 0.62 0.96 0 NA 0.59 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 20 NA NA 0 0 249 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.75 NA NA NA 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 21 21559100 35033429 1 2 249 1 1 0 0 0 0.57 1 2 0 0 NA NA NA NA NA NA 30.68 0.05 77.58 0 1 2 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 22 NA NA 0 0 249 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.93 NA NA NA 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114881 X 62829196 62870306 1 2 249 0 1 0 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 30.68 6.56 93.21 0 2 NA Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114881 BRCA 0.77 1.96 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO1002 CGP_donor_1114881 female alive other therapy unknown 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 1 33153018 217311130 1 12 175 4 3 0 0 5 0.06 0.02 17 0 0 17 4 5 34 4 9 40.02 16.08 83.91 0 2 3 Whitelist BRCA-UK 0.54 0.07 0 0 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 19 0.05 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 2 180461418 194851499 1 2 175 1 1 0 0 0 0.57 0.89 2 0 0 NA NA NA 24 6 10 40.02 47.12 52.79 0 1 2 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 3 42187976 186880408 1 9 175 0 2 1 0 6 0.3 0 39 0 0 39 6 6 57 7 15 40.02 47.72 52.05 1 2 1 Whitelist BRCA-UK 6 0.68 0.02 0 0 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 12 0.03 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 4 121651496 122489039 1 2 175 1 0 1 0 0 0.57 0.88 1 0 0 NA NA NA 6 3 3 40.02 99.86 0.13 0 1 NA Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 5 71400379 178119483 1 4 175 0 2 0 0 2 0.11 0.35 14 0 0 14 4 4 22 5 6 40.02 57.52 39.65 2 1 2 Whitelist BRCA-UK 0.54 0.6 0 0 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 6 0.02 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 6 9212604 55261253 4 10 175 1 1 1 1 6 1 0 48 0 0 48 5 11 62 5 6 40.02 24.38 75.48 0 2 5 Whitelist BRCA-UK 3 0.62 0 0 0 1 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 14 0.04 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 7 32681407 152008688 1 5 175 2 2 0 0 1 0.26 0.4 15 0 0 15 3 5 24 5 6 40.02 36.17 63.59 0 1 2 Whitelist BRCA-UK 0.62 0.64 0 0 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 9 0.03 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 8 58557042 143439235 1 5 175 0 3 0 1 1 0.11 0.61 53 0 0 53 4 10 53 4 10 40.02 52.66 47.33 0 2 3 Whitelist BRCA-UK 0.62 0.82 0 0 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 9 0.03 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 9 15200077 77019000 2 2 175 0 0 1 1 0 0.57 0.85 4 0 0 4 4 4 35 8 14 40.02 38.99 60.82 0 1 2 Whitelist BRCA-UK 0.68 0.98 0 0 0.64 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 10 39098466 131059629 1 4 175 0 2 0 1 1 0.3 0.36 8 0 0 8 3 7 9 3 4 40.02 65.03 34.79 0 1 3 Whitelist BRCA-UK 0.62 0.62 0 0 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 11 2593873 28785817 1 2 175 2 0 0 0 0 0.11 0.28 1 0 0.01 NA NA NA 11 4 6 40.02 8.42 88.04 0 2 NA Whitelist BRCA-UK 0.54 0.52 0 0.01 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 12 44887154 52152699 2 2 175 2 0 0 0 0 0.11 0.47 3 0 0 NA NA NA 16 5 5 40.02 73.27 26.71 0 1 3 Whitelist BRCA-UK 0.54 0.72 0 0 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 13 64632915 97991954 1 3 175 1 0 0 1 1 0.57 0.4 9 0 0 9 4 5 23 7 9 40.02 67.5 32.5 0 3 4 Whitelist BRCA-UK 0.62 0.65 0 0 0.64 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 5 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 14 NA NA 0 0 175 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.63 NA NA NA 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 15 42726547 42764034 1 1 175 0 1 0 0 0 0.39 0.64 1 NA NA NA NA NA NA NA NA 40.02 57.88 42.05 0 1 NA Whitelist BRCA-UK 0.62 0.85 NA NA 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 16 70674038 70809417 1 1 175 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 9 5 7 40.02 1.12 98.78 0 2 4 Whitelist BRCA-UK 0.62 0.59 NA NA 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 17 NA NA 0 0 175 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 15 5 7 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.59 NA NA NA 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 18 20892665 46133984 1 2 175 0 2 0 0 0 0.11 0.81 3 0 0 NA NA NA 6 3 5 40.02 31.32 68.62 0 2 3 Whitelist BRCA-UK 0.54 0.96 0 0 0.48 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 19 NA NA 0 0 175 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA 18 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.65 NA NA NA 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 20 NA NA 0 0 175 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.68 0 NA NA 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 21 10735279 10750450 1 1 175 0 0 0 1 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 40.02 1.79 66.51 0 2 NA Whitelist BRCA-UK 0.62 0.9 NA NA 0.59 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 22 NA NA 0 0 175 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114929 X 16111483 35865641 1 2 175 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 4 3 4 40.02 4.5 95.39 0 2 3 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1114929 BRCA 0.38 1.86 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7573998_-_CT,CN:1 1 BRCA-UK DO1003 CGP_donor_1114929 female alive C50.4 chemotherapy unknown 34 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 2 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 3 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 7 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 8 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 12 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 15 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.82 NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 16 8249679 22198632 7 9 33 3 1 2 1 2 0.67 0 20 0 0 20 4 6 57 5 7 80.06 76.11 19.36 0 2 5 Whitelist BRCA-UK 0.97 0 0 0 0.74 0 Low confidence BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS With other complex events 16 0.24 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 20 50194338 60443301 4 9 33 0 2 1 1 5 0.57 0 18 0 0 18 4 9 24 4 4 80.06 92.13 0.7 0 7 6 Whitelist BRCA-UK 0.54 0 0 0 0.64 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 13 0.2 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 22 32147537 32160609 1 1 33 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 3 5 80.06 26.96 61.93 0 0 2 Whitelist BRCA-UK 0.62 0.58 NA NA 0.59 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 2 0.03 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1114930 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1114930 BRCA 0.56 3.33 Breast-DCIS NA 0 0 NA 4 BRCA-UK DO1000 CGP_donor_1114930 female alive other therapy 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-DCIS BRCA UK 0 NA BRCA-UK::CGP_donor_1167078 1 42415554 228960881 1 18 179 6 1 1 1 9 0.04 0 18 0 0 18 5 11 26 6 6 82.32 97.92 2.08 1 3 4 Whitelist BRCA-UK 0.41 0 0 0 0.4 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 27 0.08 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 2 33485767 228562590 1 13 179 5 4 1 1 2 0.2 0.18 20 0 0 20 5 11 21 5 11 82.32 99.89 0.01 10 3 1 Whitelist BRCA-UK 0.68 0.39 0 0 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 24 0.07 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 3 14900766 103424575 1 4 179 2 0 0 0 2 0.11 0.24 3 0 0 NA NA NA 5 5 5 82.32 99.97 0 0 4 3 Whitelist BRCA-UK 0.68 0.48 0 0 0.48 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 4 104666955 149462415 1 4 179 3 0 0 0 1 0.03 0.37 5 0 0 5 3 5 11 3 5 82.32 99.79 0.01 0 5 2 Whitelist BRCA-UK 0.21 0.62 0 0 0.33 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 5 103278912 103297652 2 2 179 1 1 0 0 0 0.57 0.64 1 0 0 NA NA NA NA NA NA 82.32 99.86 0 0 4 NA Whitelist BRCA-UK 0.68 0.85 0 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 6 7561109 7583051 1 1 179 1 0 0 0 0 0.39 0.75 2 0 NA NA NA NA 9 5 5 82.32 68.56 28.61 0 3 4 Whitelist BRCA-UK 0.62 0.92 0 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 7 48626147 151416250 1 4 179 1 0 1 0 2 0.57 0.62 5 0 0 5 3 3 9 4 7 82.32 99.73 0.02 0 3 2 Whitelist BRCA-UK 10 0.68 0.83 0 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 8 32393216 58655899 2 2 179 0 0 1 1 0 0.57 1 7 0 0 7 4 4 17 4 4 82.32 77.87 22.13 0 6 7 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 9 29605014 128618253 1 5 179 2 0 0 0 3 0.11 0.44 5 0 0 5 4 5 7 5 5 82.32 99.29 0.01 0 3 4 Whitelist BRCA-UK 1 0.62 0.69 0 0 0.48 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 10 10496117 123991300 2 7 179 0 1 1 0 5 0.57 0 14 0 0 14 5 7 15 5 7 82.32 96.19 0 2 4 3 Whitelist BRCA-UK 0.77 0 0 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 9 0.03 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 11 9446172 9465085 1 1 179 0 1 0 0 0 0.39 0.15 2 0.71 NA NA NA NA 8 4 4 82.32 35.02 60.77 0 2 3 Whitelist BRCA-UK 0.62 0.36 0.71 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 12 52673594 52689465 1 1 179 0 0 1 0 0 0.39 0.86 1 0 NA NA NA NA 6 4 5 82.32 81.91 18 0 3 NA Whitelist BRCA-UK 0.62 0.99 0 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 13 19455665 111290198 1 6 179 1 2 0 1 2 0.57 0.14 8 0 0 8 5 8 8 5 5 82.32 18.11 81.89 0 2 1 Whitelist BRCA-UK 0.62 0.34 0 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 10 0.03 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 14 22231945 22243999 1 1 179 1 0 0 0 0 0.39 0.67 2 0 NA NA NA NA 8 3 3 82.32 51.25 47.83 0 3 4 Whitelist BRCA-UK 0.62 0.87 0 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 15 24670953 24685389 1 1 179 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 5 4 5 82.32 99.51 0 0 4 NA Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 16 NA NA 0 0 179 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.36 0 NA NA 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 17 NA NA 0 0 179 0 0 0 0 0 NA 0.35 NA 0 NA NA NA NA 11 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.6 0 NA NA 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 18 60852286 60984733 1 1 179 0 1 0 0 0 0.39 0.35 2 0 NA NA NA NA 4 3 4 82.32 99.96 0 0 3 5 Whitelist BRCA-UK 0.62 0.6 0 NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 19 NA NA 0 0 179 0 0 0 0 0 NA 0.78 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.94 0 NA NA 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 20 2392728 44111692 1 6 179 0 2 0 0 4 0.11 0.01 7 0 0 7 3 5 7 3 3 82.32 99.03 0 0 4 7 Whitelist BRCA-UK 0.93 0.03 0 0 0.48 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 8 0.02 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 21 16327433 34836229 1 3 179 1 1 0 0 1 0.57 0.49 4 NA 0 4 3 4 6 3 6 82.32 70.54 0.05 0 4 2 Whitelist BRCA-UK 0.87 0.73 NA 0 0.64 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 22 35674583 49531958 1 1 179 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 82.32 61.88 27.01 0 2 4 Whitelist BRCA-UK 0.62 0.9 NA NA 0.59 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167078 X 10339789 110243211 1 10 179 1 1 1 1 6 1 0.12 11 0 0 11 3 5 12 3 5 82.32 99.76 0.01 0 3 4 Whitelist BRCA-UK 0.96 0.3 0 0 1 0 No BRCA-UK CGP_donor_1167078 BRCA 0.59 3.84 Breast-AdenoCA NA 14 0.04 NA 4 BRCA-UK DO1004 CGP_donor_1167078 female deceased other therapy 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1167079 1 66812267 66925414 2 2 258 0 2 0 0 0 0.11 0 4 0 0 4 0 3 37 8 8 48.99 40.56 59.44 0 2 6 Whitelist BRCA-UK 0.54 0 0 0 0.48 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 2 22066890 30353463 2 2 258 0 0 1 1 0 0.57 0.74 1 0 0 NA NA NA 12 6 6 48.99 26.78 70.51 0 2 NA Whitelist BRCA-UK 0.68 0.91 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 3 63913913 189552623 4 15 258 0 1 1 2 11 0.57 0.04 10 0 0 10 4 10 16 5 5 48.99 65.79 31.06 0 3 4 Whitelist BRCA-UK 6 0.85 0.13 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 19 0.04 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 4 48302178 146126990 1 5 258 1 2 0 0 2 0.3 0.71 5 0 0 5 3 5 7 4 4 48.99 41.91 58.05 0 2 1 Whitelist BRCA-UK 0.45 0.9 0 0 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 5 32376344 96222148 1 3 258 0 2 0 0 1 0.11 0.05 5 0 0 5 4 5 10 6 8 48.99 60.13 39.75 0 1 2 Whitelist BRCA-UK 0.41 0.17 0 0 0.48 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 5 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 6 6984465 157517645 1 15 258 0 10 0 0 5 0 0.36 13 0 0 13 10 13 14 10 14 48.99 15.18 84.66 0 2 3 Whitelist BRCA-UK 0.13 0.61 0 0 0 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 25 0.05 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 7 68523257 156773398 1 12 258 1 3 1 1 6 0.57 0.1 12 0 0 12 3 9 15 5 9 48.99 1.65 98.12 3 2 3 Whitelist BRCA-UK 0.93 0.26 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 18 0.03 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 8 30240215 132259975 1 5 258 2 1 0 0 2 0.3 0.32 6 0 0 6 3 6 9 3 3 48.99 67.1 28.31 0 3 4 Whitelist BRCA-UK 0.93 0.57 0 0 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 9 464977 91359295 1 10 258 1 1 0 1 7 0.8 0.2 6 0 0 6 3 6 7 3 7 48.99 81.14 16.28 0 1 2 Whitelist BRCA-UK X 0.86 0.42 0 0 0.84 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 13 0.03 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 10 856950 126675301 1 13 258 2 2 0 1 8 0.53 0.23 9 0 0 9 6 9 10 6 6 48.99 34.34 62.31 5 3 2 Whitelist BRCA-UK 15 0.68 0.47 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 18 0.03 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 11 46201298 126691796 1 7 258 1 3 1 0 2 0.28 0.03 14 0 0 14 5 11 19 5 5 48.99 83.2 16.37 0 3 2 Whitelist BRCA-UK 0.62 0.1 0 0 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 12 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 12 NA NA 0 0 258 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 13 49015337 49029878 1 1 258 0 1 0 0 0 0.39 0.23 1 0 NA NA NA NA NA NA NA 48.99 88.94 11.06 0 1 NA Whitelist BRCA-UK 0.62 0.47 0 NA 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 14 33426375 65621181 2 2 258 0 0 1 1 0 0.57 0.86 3 0 0 NA NA NA 8 4 8 48.99 92.44 7.43 0 1 2 Whitelist BRCA-UK 0.68 0.99 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 15 89452907 90998398 1 2 258 0 2 0 0 0 0.11 0.34 4 0 0 4 4 4 7 5 5 48.99 57.27 37.83 0 2 3 Whitelist BRCA-UK 0.54 0.59 0 0 0.48 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 16 7845180 78997753 1 2 258 1 1 0 0 0 0.57 0.56 3 0 0 NA NA NA 4 0 3 48.99 75.58 19.41 0 1 2 Whitelist BRCA-UK 0.68 0.79 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 17 21068040 74489609 1 7 258 0 3 0 0 4 0.03 0.12 4 0 0 4 3 4 4 3 3 48.99 49.98 50.02 0 2 1 Whitelist BRCA-UK X 0.77 0.31 0 0 0.33 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 10 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 18 39279437 40953599 1 1 258 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 48.99 3.8 96.17 0 2 3 Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 19 40136717 48610411 1 2 258 1 1 0 0 0 0.57 0.04 4 0 0 4 3 4 5 3 3 48.99 12.44 87.38 0 2 1 Whitelist BRCA-UK 0.68 0.14 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 20 9185033 45806302 1 4 258 1 1 0 0 2 0.57 0.28 3 0 0 NA NA NA 8 8 8 48.99 93.07 5.96 0 1 2 Whitelist BRCA-UK 0.62 0.52 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 6 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 21 28540876 47978859 1 6 258 2 0 1 1 2 0.57 0.04 2 0 0 NA NA NA NA NA NA 48.99 0.6 76.44 0 1 2 Whitelist BRCA-UK 0.68 0.14 0 0 0.64 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 10 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 22 43200208 43211626 1 1 258 1 0 0 0 0 0.39 0.56 1 0 NA NA NA NA 5 3 5 48.99 42.23 57.77 0 2 NA Whitelist BRCA-UK 0.62 0.78 0 NA 0.59 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1167079 X 67647518 150410373 1 6 258 0 2 0 0 4 0.11 0.09 4 0 0 4 4 4 5 5 5 48.99 69.35 30.42 0 1 2 Whitelist BRCA-UK 0.68 0.25 0 0 0.48 0 No BRCA-UK CGP_donor_1167079 BRCA 0.51 1.83 Breast-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO1005 CGP_donor_1167079 female alive other therapy 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 1 63616590 107970985 2 4 98 0 0 1 1 2 0.57 0.26 9 0 0 9 8 9 20 12 12 94.62 96.89 0 0 5 6 Whitelist BRCA-UK 0.68 0.5 0 0 0.64 1 Linked to high confidence BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA After polyploidization 6 0.03 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 2 NA NA 0 0 98 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.2 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 3 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 4 NA NA 0 0 98 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.06 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 5 81925457 135300603 40 42 98 13 10 10 7 2 0.61 0 63 0 0 63 7 20 75 7 20 94.62 99.99 0 1 10 11 Whitelist BRCA-UK 1 0.85 0 0 0 0.69 1 High confidence BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA With other complex events 82 0.42 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 6 73250550 75526928 1 2 98 1 0 0 0 1 0.39 0.09 3 0 NA NA NA NA 9 3 3 94.62 97.16 0 0 4 5 Whitelist BRCA-UK 0.68 0.24 0 NA 0.59 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 3 0.02 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 7 NA NA 0 0 98 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.4 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 8 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 9 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 10 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 11 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 12 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 13 NA NA 0 0 98 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.51 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 14 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 16 NA NA 0 0 98 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.59 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 17 17733931 53140363 5 8 98 2 1 0 2 3 0.53 0 13 0 0 13 4 5 25 4 5 94.62 95.56 0 0 5 6 Whitelist BRCA-UK 0.87 0 0 0 0.64 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 13 0.07 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 18 NA NA 0 0 98 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.41 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 19 NA NA 0 0 98 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 20 24116036 55592291 11 15 98 2 3 3 3 4 0.97 0 26 0 0 26 4 6 27 4 6 94.62 92.87 0 0 9 7 Whitelist BRCA-UK 0.99 0 0 0 0.98 1 Low confidence BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA With other complex events 26 0.13 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 21 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 22 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187030 X NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187030 BRCA 0.54 6.22 Breast-AdenoCA NA 0 0 NA 6 BRCA-UK DO1007 CGP_donor_1187030 female alive other therapy 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187031 1 11664705 153660392 1 9 89 1 4 1 1 2 0.28 0.07 20 0 0 20 3 6 24 3 7 44.44 91.15 0 1 5 4 Whitelist BRCA-UK 0.68 0.21 0 0 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 16 0.09 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 2 28574021 242612800 1 6 89 4 2 0 0 0 0.06 0.7 11 0 0 11 3 4 11 3 4 44.44 37.28 60.04 0 2 4 Whitelist BRCA-UK 0.54 0.9 0 0 0.48 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 12 0.07 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 3 93734387 197569406 1 5 89 1 1 0 1 2 0.8 0.41 11 0 0 11 4 6 11 4 4 44.44 49.49 47.22 0 3 2 Whitelist BRCA-UK X 0.68 0.65 0 0 0.84 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 8 0.04 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 4 186539997 186589077 1 1 89 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 44.44 0.03 97.61 0 2 4 Whitelist BRCA-UK 0.62 0.11 NA NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 5 106771532 106827340 1 1 89 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 7 3 4 44.44 25.64 71.66 0 1 2 Whitelist BRCA-UK 0.62 0.15 NA NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 6 3264055 157610253 1 7 89 0 3 0 2 2 0.14 0.5 11 0 0 11 9 10 12 9 10 44.44 99.85 0 0 4 6 Whitelist BRCA-UK 0.77 0.74 0 0 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 12 0.07 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 7 99895066 127463712 7 7 89 3 1 0 3 0 0.28 0 18 0 0 18 13 18 32 13 19 44.44 88.92 10.85 0 4 2 Whitelist BRCA-UK 0.62 0 0 0 0.59 1 High confidence BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA Before polyploidization 14 0.08 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 8 128538428 128776430 2 2 89 0 2 0 0 0 0.11 0.14 3 0 0 NA NA NA 10 4 4 44.44 93.54 2.91 0 4 7 Whitelist BRCA-UK 0.54 0.33 0 0 0.48 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 4 0.02 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 9 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 0 0 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 10 96785732 126417371 1 2 89 1 1 0 0 0 0.57 0.44 4 NA 0 4 3 4 6 3 3 44.44 28.07 68.51 0 2 0 Whitelist BRCA-UK 0.68 0.69 NA 0 0.64 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 4 0.02 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 11 129270866 129332375 1 1 89 1 0 0 0 0 0.39 0.8 2 0 NA NA NA NA 15 3 3 44.44 40.72 55.35 0 0 2 Whitelist BRCA-UK 0.62 0.95 0 NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 12 26311839 125465609 1 2 89 0 2 0 0 0 0.11 0.8 6 NA 0 6 3 5 7 3 3 44.44 45.84 50.36 0 3 2 Whitelist BRCA-UK 0.54 0.95 NA 0 0.48 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 4 0.02 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 13 20349388 20655758 1 1 89 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 44.44 0 85.85 0 2 NA Whitelist BRCA-UK 0.62 0.63 NA NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 14 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 0 0 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 15 78465312 78591822 1 1 89 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 44.44 84.49 0 0 4 6 Whitelist BRCA-UK 0.62 1 NA NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 16 4783836 66876532 1 2 89 1 0 0 1 0 0.57 0.52 7 0 0 7 3 4 8 3 4 44.44 31.73 63.75 0 2 1 Whitelist BRCA-UK 0.68 0.76 0 0 0.64 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 4 0.02 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 17 NA NA 0 0 89 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.91 NA NA NA 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 0 0 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 18 NA NA 0 0 89 0 0 0 0 0 NA 1 NA NA NA NA NA NA 8 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 0 0 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 19 29978893 30000513 1 1 89 0 0 0 1 0 0.39 0.01 1 0 NA NA NA NA 8 4 4 44.44 91.61 0.85 0 6 NA Whitelist BRCA-UK 0.62 0.04 0 NA 0.59 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 2 0.01 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 20 15430553 56101771 1 3 89 0 2 0 0 1 0.11 0.44 9 NA 0 9 3 5 9 3 3 44.44 40.65 27.74 0 3 2 Whitelist BRCA-UK 0.62 0.69 NA 0 0.48 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 5 0.03 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 21 34713853 40512310 1 2 89 1 1 0 0 0 0.57 0.1 2 0 0 NA NA NA NA NA NA 44.44 70.29 0 0 4 6 Whitelist BRCA-UK 0.68 0.26 0 0 0.64 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 4 0.02 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 22 22931637 38880234 1 3 89 0 3 0 0 0 0.03 0.02 6 0 0 6 5 6 8 5 7 44.44 1.38 63.73 0 2 5 Whitelist BRCA-UK 0.41 0.09 0 0 0.33 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 6 0.03 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187031 X 1633968 150956558 2 4 89 1 0 1 0 2 0.57 0.46 10 0 0 10 9 10 11 9 11 44.44 51.84 43.83 0 1 2 Whitelist BRCA-UK 0.68 0.7 0 0 0.64 1 No BRCA-UK CGP_donor_1187031 BRCA 0.36 2.92 Breast-AdenoCA NA 6 0.03 stopgain,17_7579528_T_C,CN:2 2 BRCA-UK DO1008 CGP_donor_1187031 female deceased chemotherapy disease progression 58 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1187033 1 152063989 220374452 1 5 228 1 1 0 0 3 0.57 0 6 0 0 6 5 6 11 5 5 28.32 5.32 94.68 0 2 1 Whitelist BRCA-UK 3 0.68 0.02 0 0 0.64 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 7 0.02 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 2 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 3 16746837 84964010 3 3 228 1 0 1 1 0 0.8 0 4 0 0 4 4 4 33 7 7 28.32 87.01 9.84 5 1 2 Whitelist BRCA-UK 0.87 0 0 0 0.84 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 4 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 5 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 6 152281832 152471430 1 1 228 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 28.32 0.22 99.65 0 1 2 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 7 NA NA 0 0 228 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 8 47338546 74952612 1 2 228 0 0 1 0 1 0.39 0.05 2 0 NA NA NA NA 4 4 4 28.32 29.38 70.61 0 1 2 Whitelist BRCA-UK 0.68 0.16 0 NA 0.59 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 3 0.01 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 9 17517806 130978055 15 16 228 4 4 4 3 1 0.98 0 13 0 0 13 13 13 15 15 15 28.32 67.27 32.52 0 2 1 Whitelist BRCA-UK 0.95 0 0 0 0.99 1 High confidence BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA Canonical without polyploidization 31 0.07 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 10 47401503 71861121 2 6 228 0 0 2 2 2 0.26 0.27 13 0 0 13 3 5 28 3 4 28.32 68.51 28.17 0 1 3 Whitelist BRCA-UK 0.62 0.51 0 0 0.59 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 10 0.02 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 11 70563305 74965328 1 2 228 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 10 7 7 28.32 52.4 43.67 0 1 2 Whitelist BRCA-UK 0.54 0.01 NA 0 0.48 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 12 14425084 25928588 8 10 228 2 2 2 2 2 1 0.03 8 0 0 8 6 8 18 9 12 28.32 37.03 62.89 0 1 2 Whitelist BRCA-UK 0.86 0.1 0 0 1 1 Low confidence BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA Canonical without polyploidization 18 0.04 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 13 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 14 31353299 48162303 1 2 228 0 1 0 1 0 0.57 0.57 5 0 0 5 3 5 8 4 4 28.32 16.13 82.96 0 3 2 Whitelist BRCA-UK 0.68 0.79 0 0 0.64 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 15 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 16 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 17 38442067 79276431 84 114 228 20 22 23 19 30 0.92 0 116 0 0 116 5 5 138 7 7 28.32 78.16 17.4 8 4 5 Whitelist BRCA-UK 0.88 0 0 0 0.94 1 Low confidence BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA With other complex events 198 0.43 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 18 22506198 23800358 2 2 228 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 17 8 8 28.32 85.13 10.22 0 1 2 Whitelist BRCA-UK 0.68 0.05 0 0 0.64 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 19 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 20 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 21 18531210 42344561 6 7 228 1 1 1 3 1 0.57 0.01 10 0 0 10 10 10 11 11 11 28.32 24.08 53.27 0 1 2 Whitelist BRCA-UK 0.77 0.04 0 0 0.64 1 High confidence BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA Canonical without polyploidization 13 0.03 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 22 NA NA 0 0 228 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1187033 X 110086374 110115501 1 1 228 1 0 0 0 0 0.39 0.76 1 0 NA NA NA NA 11 11 11 28.32 86.8 9.81 0 2 NA Whitelist BRCA-UK 0.62 0.93 0 NA 0.59 1 No BRCA-UK CGP_donor_1187033 BRCA 0.59 1.81 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO1009 CGP_donor_1187033 female alive other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 1 867507 6802748 2 2 803 0 0 0 2 0 0.11 0 2 0 0 NA NA NA 16 3 5 86.57 100 0 0 4 5 Whitelist BRCA-UK 0.54 0 0 0 0.48 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 4 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 2 122442175 191880486 10 17 803 5 2 1 2 7 0.31 0 26 0 0 26 6 8 36 6 8 86.57 99.67 0.22 0 3 4 Whitelist BRCA-UK 4_8 0.68 0 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 27 0.02 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 3 73607514 78348970 16 39 803 1 5 6 4 23 0.32 0 31 0 0 31 3 3 57 4 4 86.57 96.81 0.04 14 4 3 Whitelist BRCA-UK 12_8 0.62 0 0 0 0.59 1 Linked to low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 55 0.03 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 4 53118926 163564696 52 106 803 14 11 15 12 54 0.86 0 115 0 0 115 6 11 136 6 11 86.57 97.37 0.05 27 4 6 Whitelist BRCA-UK 5_8 0.99 0 0 0 0.9 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 158 0.1 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 5 77648424 175567950 7 12 803 1 2 2 2 5 0.93 0.08 9 0 0 9 6 9 38 9 16 86.57 99.43 0.45 2 3 4 Whitelist BRCA-UK 12_4 0.68 0.23 0 0 0.95 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA After polyploidization 19 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 6 88241210 163838908 4 17 803 0 3 1 0 13 0.11 0 13 0 0 13 6 10 15 6 12 86.57 95.06 4.8 18 3 4 Whitelist BRCA-UK 0.62 0 0 0 0.48 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 21 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 7 75587775 134670401 5 14 803 1 1 1 2 9 0.9 0 9 0 0 9 5 5 15 6 9 86.57 68.39 29.05 0 2 4 Whitelist BRCA-UK 12_5_8 0.81 0 0 0 0.92 1 Linked to low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 19 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 8 13736456 132773372 50 164 803 12 14 11 13 114 0.94 0 155 0 0 155 6 6 160 6 7 86.57 95.45 0.58 22 9 8 Whitelist BRCA-UK 11_12_2_4_5_7 0.93 0 0 0 0.96 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 214 0.13 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 9 9274106 10276022 3 3 803 3 0 0 0 0 0.03 0 8 0 0 8 4 8 19 5 5 86.57 80.62 18.67 0 1 2 Whitelist BRCA-UK 0.41 0 0 0 0.33 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 6 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 10 800474 27783066 20 65 803 8 1 7 4 45 0.11 0 50 0 0 50 4 6 85 4 6 86.57 99.82 0 14 8 4 Whitelist BRCA-UK 4 0.91 0 0 0 0.48 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 85 0.05 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 11 66056632 80789772 21 96 803 9 3 3 6 75 0.19 0 75 0 0 75 5 5 83 5 5 86.57 51.42 48.15 12 2 4 Whitelist BRCA-UK 12_8 0.93 0 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 117 0.07 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 12 24474408 110217685 24 154 803 13 5 2 4 130 0.01 0 123 0 0 123 7 7 125 7 7 86.57 95.9 0 51 3 4 Whitelist BRCA-UK 11_5_7_8 0.87 0 0 0 0.18 1 Linked to low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 178 0.11 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 13 21462094 68307040 3 4 803 1 0 2 0 1 0.3 0 4 0 0 4 4 4 4 4 4 86.57 100 0 4 3 4 Whitelist BRCA-UK 0.68 0 0 0 0.59 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 7 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 14 55920194 64622041 1 3 803 0 1 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 86.57 99.09 0 0 3 NA Whitelist BRCA-UK 0.87 0 0 0 0.84 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 6 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 15 23857895 93182602 1 3 803 1 1 0 0 1 0.57 0 4 NA 0 4 3 4 5 3 3 86.57 99.86 0 4 4 3 Whitelist BRCA-UK 0.87 0 NA 0 0.64 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 5 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 16 387173 58305656 4 5 803 1 2 0 1 1 0.57 0.02 7 0 0 7 4 5 12 5 9 86.57 77.04 18.44 0 4 3 Whitelist BRCA-UK 0.62 0.08 0 0 0.64 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 9 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 17 3461209 47355978 1 14 803 3 1 1 0 9 0.28 0.38 24 0 0 24 4 7 25 4 5 86.57 89.21 5.24 1 4 5 Whitelist BRCA-UK 12 0.98 0.63 0 0 0.59 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 19 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 18 23395907 63717763 3 3 803 0 2 1 0 0 0.3 0 5 0 0 5 5 5 5 5 5 86.57 99.96 0 0 3 4 Whitelist BRCA-UK 0.62 0 0 0 0.59 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 6 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 19 37120019 37368501 1 1 803 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 11 5 5 86.57 61.96 30.77 0 2 3 Whitelist BRCA-UK 0.62 0.17 0 NA 0.59 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 20 54681398 60982304 4 13 803 2 1 0 1 9 0.57 0 18 0 0 18 4 7 70 4 7 86.57 92.57 0.34 6 10 7 Whitelist BRCA-UK 8 0.8 0 0 0 0.64 1 Linked to low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 17 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 21 10850512 47974458 25 51 803 7 6 8 4 26 0.71 0 52 0 0 52 3 9 52 3 4 86.57 76.98 0.16 3 9 14 Whitelist BRCA-UK 6_8 0.8 0 0 0 0.78 1 Linked to low confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 76 0.05 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 22 46697938 46745560 1 1 803 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 86.57 0.09 99.91 0 1 2 Whitelist BRCA-UK 0.62 0.01 NA NA 0.59 1 No BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199104 X 30692107 137148702 3 15 803 2 1 2 1 9 0.88 0.11 25 0 0 25 7 12 34 7 8 86.57 85.09 11.52 4 3 2 Whitelist BRCA-UK 4 0.73 0.28 0 0 0.91 1 High confidence BRCA-UK CGP_donor_1199104 BRCA 0.53 3.83 Breast-AdenoCA With other complex events 21 0.01 NA 3 BRCA-UK DO1018 CGP_donor_1199104 female other therapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 1 7883677 218951309 1 23 416 6 6 0 0 11 0.01 0.1 24 0 0 24 6 9 27 6 10 70.66 88.47 8.56 0 4 3 Whitelist BRCA-UK 2_6 0.62 0.27 0 0 0.16 1 Linked to high confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 35 0.04 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 2 31207852 222689715 2 17 416 0 0 1 1 15 0.57 0.66 25 0 0 25 7 13 29 7 7 70.66 74.74 25.16 0 3 4 Whitelist BRCA-UK 1_5 0.93 0.87 0 0 0.64 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 19 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 3 71396733 176902794 1 10 416 3 4 0 0 3 0.06 0.01 12 0 0 12 6 6 14 7 9 70.66 73.25 26.72 0 3 4 Whitelist BRCA-UK 5 0.41 0.04 0 0 0.48 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 17 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 4 17594981 115549931 1 7 416 1 4 0 0 2 0.04 0.02 10 0 0 10 4 9 16 4 4 70.66 72.25 25.18 0 5 4 Whitelist BRCA-UK 6 0.41 0.07 0 0 0.36 1 Linked to high confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 12 0.01 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 5 55448216 154163003 4 8 416 2 0 0 2 4 0.26 1 5 0 0 5 5 5 13 6 6 70.66 75.42 21.92 0 1 2 Whitelist BRCA-UK 0.54 1 0 0 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 12 0.01 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 6 124809960 139777060 80 91 416 14 25 21 20 11 0.38 0 80 0 0 80 9 10 103 9 10 70.66 80.98 18.78 180 7 8 Whitelist BRCA-UK 1 0.62 0 0 0 0.59 1 High confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 171 0.21 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 7 1301874 3104304 2 18 416 0 1 0 1 16 0.57 0 11 0 0 11 3 6 25 6 18 70.66 99.82 0 0 4 6 Whitelist BRCA-UK 12 0.93 0 0 0 0.64 1 Linked to low confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 20 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 8 37561045 121196885 1 11 416 2 3 0 0 6 0.14 0.74 15 0 0 15 4 11 18 4 11 70.66 55.13 44.75 0 4 2 Whitelist BRCA-UK 6 0.62 0.91 0 0 0.59 1 Linked to high confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 16 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 9 91022050 91036714 1 1 416 1 0 0 0 0 0.39 0.21 1 0 NA NA NA NA 5 4 4 70.66 96.89 0 0 3 NA Whitelist BRCA-UK 0.62 0.43 0 NA 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 10 26610763 124184315 1 10 416 2 4 0 0 4 0.06 0.73 10 0 0 10 8 10 12 8 8 70.66 99.82 0 0 4 3 Whitelist BRCA-UK 0.41 0.9 0 0 0.48 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 16 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 11 127558427 131668626 2 2 416 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA 23 8 8 70.66 54.91 44.67 0 2 NA Whitelist BRCA-UK 0.68 0.96 0 0 0.64 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 12 1812499 12002882 13 31 416 3 5 1 4 18 0.44 0 17 0 0 17 5 17 35 8 8 70.66 88.89 11.03 10 5 4 Whitelist BRCA-UK 0.82 0 0 0 0.64 1 Low confidence BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA With other complex events 44 0.05 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 13 20325562 95473033 1 4 416 1 1 0 0 2 0.57 0.01 5 0 0 5 3 4 5 3 4 70.66 66.1 33.9 0 1 3 Whitelist BRCA-UK 0.54 0.03 0 0 0.64 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 14 NA NA 0 0 416 0 0 0 0 0 NA 0.32 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.57 0 NA NA 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 15 40327066 40343584 1 1 416 0 1 0 0 0 0.39 0.05 2 0 NA NA NA NA 4 4 4 70.66 20.24 79.76 0 2 3 Whitelist BRCA-UK 0.62 0.17 0 NA 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 16 31473769 31489531 1 1 416 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 17 6 8 70.66 62.55 31.88 0 3 NA Whitelist BRCA-UK 0.62 0.02 0 NA 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 17 4795925 79278647 1 2 416 0 1 0 1 0 0.57 0.13 6 0 0 6 5 6 6 5 6 70.66 28.18 67.04 0 2 3 Whitelist BRCA-UK 0.68 0.32 0 0 0.64 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 18 1594179 48721085 1 6 416 2 3 0 0 1 0.14 0.45 10 0 0 10 4 7 12 4 7 70.66 99.99 0 0 4 3 Whitelist BRCA-UK 0.54 0.69 0 0 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 19 1862542 58323259 1 11 416 1 6 0 0 4 0 0.21 12 0 0 12 6 10 12 6 10 70.66 38.15 60.31 0 3 2 Whitelist BRCA-UK 2 0.41 0.44 0 0 0.09 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 18 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 20 61408649 61483517 1 1 416 1 0 0 0 0 0.39 0.17 2 0 NA NA NA NA 12 4 7 70.66 66.56 25.76 0 2 3 Whitelist BRCA-UK 0.62 0.39 0 NA 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 21 28723533 28953936 1 1 416 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 3 70.66 77.35 0 0 4 5 Whitelist BRCA-UK 0.62 0.21 NA NA 0.59 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 22 23546693 44520322 1 4 416 1 3 0 0 0 0.11 0.82 6 0 0 6 3 4 8 3 5 70.66 61.61 38.39 0 3 4 Whitelist BRCA-UK 0.54 0.96 0 0 0.48 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199129 X 10581844 128830263 1 9 416 4 2 0 0 3 0.06 0.58 17 0 0 17 5 15 18 6 6 70.66 90.46 6.26 0 3 4 Whitelist BRCA-UK 0.62 0.8 0 0 0.48 1 No BRCA-UK CGP_donor_1199129 BRCA 0.56 2.88 Breast-AdenoCA NA 15 0.02 frameshift_deletion,17_7578263_-_G,CN:2 2 BRCA-UK DO1020 CGP_donor_1199129 female chemotherapy unknown 33 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 1 51279134 51399659 3 3 240 3 0 0 0 0 0.03 0.04 5 0 0 5 0 3 39 5 5 73.02 99.98 0.02 0 0 3 Whitelist BRCA-UK 0.41 0.14 0 0 0.33 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 2 198792481 219039144 3 8 240 0 1 0 2 5 0.3 0.35 8 0 0 8 4 4 27 11 11 73.02 98.78 1.13 0 3 4 Whitelist BRCA-UK 0.62 0.6 0 0 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 3 164963316 165719150 2 2 240 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 13 4 4 73.02 99.82 0.06 0 3 NA Whitelist BRCA-UK 0.68 0.18 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 4 74792822 102226977 2 4 240 2 0 1 1 0 0.57 0.52 11 0 0 11 4 7 23 5 5 73.02 74.84 24.94 0 4 3 Whitelist BRCA-UK 0.68 0.76 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 5 4252249 120757573 1 3 240 0 2 0 0 1 0.11 0 3 NA 0.06 NA NA NA NA NA NA 73.02 21.77 75.56 0 2 3 Whitelist BRCA-UK 0.62 0 NA 0.06 0.48 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 6 122875212 123110114 2 2 240 1 0 1 0 0 0.57 0 6 0 0 6 3 6 43 11 15 73.02 80.43 19.43 0 4 2 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 7 5508930 157129771 1 10 240 4 2 0 0 4 0.06 0.48 14 0 0 14 6 8 15 6 8 73.02 97.14 0.13 0 3 2 Whitelist BRCA-UK 0.68 0.72 0 0 0.48 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 8 41127422 122943006 14 21 240 4 2 4 4 7 0.84 0 33 0 0 33 4 6 45 5 6 73.02 96.58 0 5 7 6 Whitelist BRCA-UK 0.95 0 0 0 0.88 0 Low confidence BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA With other complex events 35 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 9 84314429 137184047 1 3 240 1 2 0 0 0 0.3 0.03 6 0 0 6 5 6 9 5 5 73.02 99.71 0.15 0 3 4 Whitelist BRCA-UK 0.62 0.11 0 0 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 10 66649449 82644192 2 4 240 0 0 1 1 2 0.57 0.54 6 0 0 6 4 6 14 4 4 73.02 56.71 39.28 1 4 3 Whitelist BRCA-UK 0.62 0.77 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 11 20841951 105869758 1 12 240 5 4 1 0 2 0.08 0.76 17 0 0 17 5 11 18 5 8 73.02 64.4 32.01 2 3 4 Whitelist BRCA-UK 0.62 0.92 0 0 0.48 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 12 14868471 121854753 1 9 240 2 4 1 0 2 0.17 0.88 13 0 0 13 3 5 14 3 5 73.02 96.24 0.02 0 3 4 Whitelist BRCA-UK 0.54 1 0 0 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 13 NA NA 0 0 240 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.99 0 NA NA 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 14 105786010 105815224 1 1 240 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA 4 4 4 73.02 10.44 88.65 0 1 NA Whitelist BRCA-UK 0.62 0.26 NA NA 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 15 84792741 84829517 1 1 240 0 0 0 1 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 73.02 0.04 99.82 0 2 3 Whitelist BRCA-UK 0.62 0.21 NA NA 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 16 46655181 79014676 1 4 240 2 2 0 0 0 0.26 0.43 9 0 0 9 5 9 10 5 5 73.02 86.88 13.03 0 2 3 Whitelist BRCA-UK 0.62 0.68 0 0 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 17 39599856 76320043 1 6 240 0 3 1 0 2 0.11 0.16 9 0 0 9 4 5 13 4 5 73.02 68.22 27.34 0 5 3 Whitelist BRCA-UK 0.62 0.37 0 0 0.48 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 18 13065039 60957981 1 2 240 1 1 0 0 0 0.57 0.23 3 0.04 0 NA NA NA 5 3 3 73.02 80.46 19.51 0 2 3 Whitelist BRCA-UK 0.68 0.46 0.04 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 19 831618 58208210 11 13 240 2 1 4 4 2 0.48 0 34 0 0 34 5 5 35 5 6 73.02 71.22 27.05 4 3 5 Whitelist BRCA-UK 0.62 0 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA With other complex events 24 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 20 7022155 10972661 1 1 240 0 1 0 0 0 0.39 0.82 1 0.73 NA NA NA NA NA NA NA 73.02 99.03 0 0 3 NA Whitelist BRCA-UK 0.62 0.96 0.73 NA 0.59 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 21 38614457 45266413 1 2 240 0 2 0 0 0 0.11 0.77 4 NA 0 4 4 4 7 5 7 73.02 29.66 47.7 0 2 3 Whitelist BRCA-UK 0.54 0.93 NA 0 0.48 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 22 23545032 38442585 1 2 240 1 1 0 0 0 0.57 0.38 3 0 0 NA NA NA NA NA NA 73.02 100 0 0 3 5 Whitelist BRCA-UK 0.68 0.63 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199131 X 24410099 24569636 2 4 240 0 0 1 1 2 0.57 0.24 4 0 0 4 0 3 19 3 4 73.02 58.72 37.89 0 2 3 Whitelist BRCA-UK 7 0.68 0.47 0 0 0.64 0 No BRCA-UK CGP_donor_1199131 BRCA 0.48 3.16 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 BRCA-UK DO1010 CGP_donor_1199131 female other therapy 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 1 158747229 197873674 4 4 249 0 1 2 1 0 0.57 0.2 4 0 0 4 0 3 19 4 5 74.91 83.1 16.89 0 6 7 Whitelist BRCA-UK 0.68 0.42 0 0 0.64 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 8 0.02 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 2 60651040 239571845 1 12 249 4 0 2 1 5 0.17 0.05 9 0 0 9 5 7 13 6 8 74.91 70.49 29.4 0 4 2 Whitelist BRCA-UK 0.62 0.17 0 0 0.59 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 19 0.04 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 3 1404739 179146781 3 4 249 2 0 1 0 1 0.3 0.21 11 0 0 11 4 6 13 4 7 74.91 89.41 7.5 0 3 2 Whitelist BRCA-UK 0.62 0.44 0 0 0.59 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 7 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 4 57762154 152864604 1 14 249 4 1 0 0 9 0.04 0.2 8 0 0 8 3 5 8 3 4 74.91 99.78 0.01 0 3 4 Whitelist BRCA-UK 2_8 0.62 0.43 0 0 0.36 1 Linked to high confidence BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA With other complex events 19 0.04 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 5 36498607 167874691 3 7 249 2 2 1 1 1 0.88 0.9 6 0 0 6 3 5 6 3 5 74.91 63.94 35.93 0 5 2 Whitelist BRCA-UK 0.77 1 0 0 0.91 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 13 0.03 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 6 NA NA 0 0 249 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.89 0 NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 7 43571145 46723270 6 6 249 1 1 2 2 0 0.88 0 1 0 0 NA NA NA 6 3 6 74.91 99.77 0 0 4 NA Whitelist BRCA-UK 0.93 0 0 0 0.91 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 12 0.02 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 8 53301916 73691310 8 8 249 2 2 2 2 0 1 0 15 0 0 15 15 15 29 15 18 74.91 99.99 0 0 8 6 Whitelist BRCA-UK 1 0 0 0 1 1 High confidence BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA After polyploidization 16 0.03 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 9 NA NA 0 0 249 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.75 0 NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 10 61519855 126103642 2 3 249 0 0 1 1 1 0.57 0.65 2 0 0 NA NA NA 7 4 6 74.91 76.6 23.23 0 2 4 Whitelist BRCA-UK 0.87 0.86 0 0 0.64 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 11 49405195 57910518 2 2 249 0 0 1 1 0 0.57 0.55 1 0 0 NA NA NA 4 0 0 74.91 28.89 70.55 0 4 NA Whitelist BRCA-UK 0.68 0.77 0 0 0.64 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 12 13391385 68416780 1 5 249 1 0 1 0 3 0.57 0.65 3 0 0 NA NA NA 10 5 5 74.91 80.12 19.8 0 4 5 Whitelist BRCA-UK 8 0.62 0.86 0 0 0.64 1 Linked to high confidence BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA With other complex events 7 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 13 26103998 87809335 5 5 249 1 1 1 2 0 0.9 0.38 5 0 0 5 5 5 5 5 5 74.91 76.49 23.51 0 4 2 Whitelist BRCA-UK 0.93 0.63 0 0 0.92 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 10 0.02 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 14 25548096 36210827 1 1 249 0 0 1 0 0 0.39 0.71 2 0 NA NA NA NA 5 4 4 74.91 46.81 49.49 0 2 4 Whitelist BRCA-UK 0.62 0.9 0 NA 0.59 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 2 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 15 NA NA 0 0 249 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.3 0 NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 16 NA NA 0 0 249 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.89 0 NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 17 48242019 59964315 1 4 249 2 0 0 0 2 0.11 0.11 6 0 0 6 3 4 10 4 4 74.91 81.32 18.68 0 8 2 Whitelist BRCA-UK 0.68 0.29 0 0 0.48 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 18 66004659 70682881 1 1 249 1 0 0 0 0 0.39 0.32 2 0 0 NA NA NA 5 3 5 74.91 83.15 16.82 0 3 4 Whitelist BRCA-UK 0.62 0.58 0 0 0.59 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 2 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 19 NA NA 0 0 249 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.49 NA NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 20 10788467 38427231 1 2 249 1 0 0 1 0 0.57 0.19 1 NA 0 NA NA NA NA NA NA 74.91 99.02 0 0 4 NA Whitelist BRCA-UK 0.68 0.41 NA 0 0.64 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 21 NA NA 0 0 249 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 22 50789747 50802700 1 1 249 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 74.91 99.02 0 0 4 NA Whitelist BRCA-UK 0.62 1 NA NA 0.59 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 2 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199137 X NA NA 0 0 249 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA 7 6 7 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.79 0 NA NA 1 No BRCA-UK CGP_donor_1199137 BRCA 0.66 3.91 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1011 CGP_donor_1199137 female other therapy 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 1 217357432 229030470 4 6 426 1 1 1 1 2 1 0.93 8 0 0 8 5 7 33 5 6 65.33 63.97 35.87 0 4 9 Whitelist BRCA-UK 0.68 1 0 0 1 0 Linked to low confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA After polyploidization 10 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 2 16077672 242757221 16 31 426 4 2 4 6 15 0.57 0.08 30 0 0 30 5 7 31 5 7 65.33 64.02 33.2 0 4 3 Whitelist BRCA-UK 1 0.93 0.23 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA With other complex events 47 0.06 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 3 44425923 90280177 36 36 426 14 8 8 6 0 0.26 0 23 0 0 23 14 17 39 14 17 65.33 92.6 4.25 0 1 3 Whitelist BRCA-UK 0.62 0 0 0 0.59 0 High confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA Canonical without polyploidization 72 0.08 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 4 89325214 181614013 1 9 426 5 0 2 1 1 0.07 0.33 11 0 0 11 6 11 17 6 6 65.33 48.68 51.28 0 1 2 Whitelist BRCA-UK 0.62 0.58 0 0 0.48 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 17 0.02 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 5 11405026 77964649 4 6 426 0 1 2 1 2 0.57 0.19 13 0 0 13 6 8 16 9 9 65.33 44.06 55.82 0 4 2 Whitelist BRCA-UK 0.93 0.42 0 0 0.64 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 10 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 6 146079326 157043927 3 8 426 1 1 1 0 5 0.8 0.26 11 0 0 11 8 11 23 9 9 65.33 57.02 42.84 0 3 4 Whitelist BRCA-UK 0.87 0.5 0 0 0.84 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 11 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1199138 7 56048999 132467614 1 5 426 2 0 0 0 3 0.11 0.16 7 0 0 7 3 7 7 3 3 65.33 74.04 23.38 0 4 3 Whitelist BRCA-UK 0.68 0.37 0 0 0.48 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 7 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 8 106917395 143420924 15 17 426 4 3 4 4 2 0.98 0 24 0 0 24 4 7 38 5 6 65.33 83.3 13.28 0 7 8 Whitelist BRCA-UK 0.99 0.01 0 0 0.99 0 Low confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA With other complex events 32 0.04 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 9 29350930 29396321 2 2 426 0 0 1 1 0 0.57 0.21 2 0 0 NA NA NA 12 3 3 65.33 65.9 30.98 0 1 4 Whitelist BRCA-UK 0.68 0.44 0 0 0.64 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 4 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 10 19839647 117021195 1 18 426 4 0 0 0 14 0.01 0.1 11 0 0 11 5 8 13 5 5 65.33 96.31 0 0 4 3 Whitelist BRCA-UK 3 0.54 0.27 0 0 0.16 0 Linked to high confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA With other complex events 22 0.03 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 11 64326051 80060406 23 35 426 6 7 3 7 12 0.6 0 56 0 0 56 5 5 69 10 10 65.33 24.44 71.49 2 19 25 Whitelist BRCA-UK 0.98 0 0 0 0.67 0 Low confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA With other complex events 58 0.07 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 12 NA NA 0 0 426 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.13 0 NA NA 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 13 44735591 46127956 1 16 426 1 0 1 1 13 0.8 0.11 6 0 0 6 3 5 10 4 4 65.33 29.8 70.2 0 2 1 Whitelist BRCA-UK 4 0.87 0.28 0 0 0.84 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 19 0.02 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 14 NA NA 0 0 426 0 0 0 0 0 NA 0.41 NA 0 NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.65 0 NA NA 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 15 63478160 78289705 1 16 426 3 0 1 1 11 0.28 0 5 0 0 5 3 5 10 3 7 65.33 68.9 30.97 0 3 1 Whitelist BRCA-UK 10_3 0.62 0 0 0 0.59 0 Linked to high confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA Canonical without polyploidization 21 0.02 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 16 10983660 11108556 1 1 426 1 0 0 0 0 0.39 0.37 2 0 NA NA NA NA NA NA NA 65.33 99.77 0.14 0 2 4 Whitelist BRCA-UK 0.62 0.62 0 NA 0.59 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 2 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 17 17774715 19749001 4 6 426 0 1 1 2 2 0.57 0 11 0 0 11 3 4 26 3 4 65.33 77.38 17.38 0 4 6 Whitelist BRCA-UK 11 0.62 0 0 0 0.64 0 Linked to low confidence BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA With other complex events 10 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 18 31126563 53139900 1 2 426 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 4 3 4 65.33 72.55 27.42 0 2 5 Whitelist BRCA-UK 0.54 1 0 0 0.48 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 4 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 19 13465586 28689853 1 2 426 2 0 0 0 0 0.11 0.05 4 0 0 4 4 4 6 5 6 65.33 92.39 0.29 0 2 4 Whitelist BRCA-UK 0.54 0.17 0 0 0.48 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 4 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 20 31578827 32099541 1 3 426 2 0 0 0 1 0.11 0.87 3 0 0 NA NA NA 7 4 4 65.33 98.12 1.67 0 2 6 Whitelist BRCA-UK 0.41 1 0 0 0.48 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 21 NA NA 0 0 426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 0 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 22 50219332 50235538 1 1 426 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 65.33 100 0 0 4 NA Whitelist BRCA-UK 0.62 0.21 NA NA 0.59 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 2 0 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1199138 X 36473637 86066163 2 4 426 0 1 1 0 2 0.57 0.38 7 0 0 7 0 6 14 4 8 65.33 98.83 0.68 0 1 2 Whitelist BRCA-UK 1 0.63 0 0 0.64 0 No BRCA-UK CGP_donor_1199138 BRCA 0.72 3.18 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-UK DO1012 CGP_donor_1199138 female other therapy 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 1 26522430 42300442 3 8 192 1 0 1 1 5 0.8 0 4 0 0 4 4 4 22 7 9 27.9 39.01 57.77 5 2 3 Whitelist BRCA-UK 0.68 0 0 0 0.84 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 11 0.03 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 2 494378 148426165 1 20 192 1 2 2 0 15 0.53 0.15 16 0 0 16 5 7 18 5 7 27.9 22.75 74.56 2 2 3 Whitelist BRCA-UK 1 0.91 0.35 0 0 0.64 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 25 0.07 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 3 3536437 158590135 10 13 192 4 0 4 2 3 0.22 0.05 34 0 0 34 5 6 36 5 6 27.9 48.77 48.17 0 4 2 Whitelist BRCA-UK 0.68 0.15 0 0 0.59 0 Low confidence BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA With other complex events 23 0.06 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 4 53307836 100323926 27 28 192 7 6 7 7 1 0.99 0 46 0 0 46 5 5 49 5 5 27.9 11.7 85.72 0 5 2 Whitelist BRCA-UK 0.98 0 0 0 1 0 Low confidence BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA With other complex events 55 0.14 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 5 41995005 89258804 1 6 192 1 1 0 1 3 0.8 0.18 2 0 0 NA NA NA NA NA NA 27.9 58.66 41.22 0 1 2 Whitelist BRCA-UK 2 0.93 0.39 0 0 0.84 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 9 0.02 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 6 NA NA 0 0 192 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 7 54980299 129629873 2 9 192 2 0 1 1 5 0.57 0.15 7 0 0 7 5 7 12 7 11 27.9 45.67 51 4 4 3 Whitelist BRCA-UK 0.85 0.35 0 0 0.64 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 8 39134563 39169453 2 2 192 0 0 0 2 0 0.11 0.01 2 0 0 NA NA NA 12 5 8 27.9 66.08 30.5 2 1 2 Whitelist BRCA-UK 0.54 0.06 0 0 0.48 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 9 NA NA 0 0 192 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 10 NA NA 0 0 192 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 7 4 7 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.13 NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 11 62330683 65170602 5 5 192 2 1 1 1 0 0.9 0 5 0 0 5 3 5 35 5 8 27.9 57.35 39.02 0 4 3 Whitelist BRCA-UK 0.93 0 0 0 0.92 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 10 0.03 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 12 40426462 40489752 1 1 192 1 0 0 0 0 0.39 0.23 1 0 NA NA NA NA 4 4 4 27.9 36.23 63.69 0 2 NA Whitelist BRCA-UK 0.62 0.46 0 NA 0.59 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 13 NA NA 0 0 192 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.21 NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 14 31249224 43197371 9 10 192 3 0 2 4 1 0.27 0 8 0 0 8 4 5 11 4 4 27.9 4.1 79.99 0 2 3 Whitelist BRCA-UK 0.62 0 0 0 0.59 0 Low confidence BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA With other complex events 19 0.05 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 15 NA NA 0 0 192 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.21 NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 16 69731339 69758628 1 1 192 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 27.9 0 95.48 0 2 NA Whitelist BRCA-UK 0.62 0.5 NA NA 0.59 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 17 37487284 49969375 2 7 192 0 0 3 3 1 0.11 0 13 0 0 13 3 5 17 3 5 27.9 24.46 70.28 2 1 18 Whitelist BRCA-UK 0.62 0.01 0 0 0.48 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 18 22888673 66857435 1 3 192 0 0 2 0 1 0.11 0.5 1 NA 0 NA NA NA NA NA NA 27.9 2.51 97.46 0 2 NA Whitelist BRCA-UK 0.62 0.74 NA 0 0.48 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 5 0.01 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 19 20947091 38069794 1 6 192 0 1 1 0 4 0.57 0.06 7 0 0 7 0 4 8 3 4 27.9 5.42 87.31 0 2 3 Whitelist BRCA-UK 2 0.93 0.19 0 0 0.64 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 8 0.02 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 20 NA NA 0 0 192 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.33 NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 21 33945059 39632736 1 1 192 0 0 0 1 0 0.39 0.51 2 NA NA NA NA NA 5 4 5 27.9 67.7 9.65 0 1 2 Whitelist BRCA-UK 0.62 0.75 NA NA 0.59 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 22 NA NA 0 0 192 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230722 X NA NA 0 0 192 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.01 NA NA NA 0 No BRCA-UK CGP_donor_1230722 BRCA 0.27 2.38 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579345_-_CAAGAAGCCCAGA,CN:2 4 BRCA-UK DO1013 CGP_donor_1230722 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 2 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 3 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 7 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 8 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 10 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 12 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 17 6272054 47320751 28 28 33 6 8 9 5 0 0.7 0 30 0 0 30 4 5 33 4 4 2.2 52.29 43.17 2 2 1 Whitelist BRCA-UK 0.81 0 0 0 0.78 0 Low confidence BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA With other complex events 56 0.85 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 21 31670543 32728068 1 1 33 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 2.2 2.2 75.16 0 1 2 Whitelist BRCA-UK 0.62 0.59 NA NA 0.59 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 2 0.03 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230724 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1230724 BRCA 0.53 2 Breast-LobularCA NA 0 0 NA 2 BRCA-UK DO1014 CGP_donor_1230724 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-LobularCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 1 239813421 240054644 1 1 329 0 1 0 0 0 0.39 0 2 0.4 NA NA NA NA 11 3 3 72.72 65.56 31.08 0 5 7 Whitelist BRCA-UK 0.62 0 0.4 NA 0.59 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 2 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 2 98806860 100743118 2 2 329 0 1 1 0 0 0.57 0 4 0 0 4 0 4 6 3 6 72.72 96.54 0.77 0 2 3 Whitelist BRCA-UK 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 4 0.01 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 3 5490495 59153906 4 6 329 1 0 2 1 2 0.57 0.01 11 0 0 11 4 6 14 5 5 72.72 96.85 0 0 3 1 Whitelist BRCA-UK 0.93 0.03 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 10 0.02 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 4 NA NA 0 0 329 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 0 NA NA 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 0 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 5 51047194 59523791 7 36 329 1 3 0 3 29 0.28 0 41 0 0 41 4 4 52 4 5 72.72 97.14 0 3 13 15 Whitelist BRCA-UK 0.64 0 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 43 0.07 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 6 43706906 51676727 2 5 329 0 1 1 0 3 0.57 0 8 0 0 8 5 7 13 5 7 72.72 87.68 9.14 0 2 3 Whitelist BRCA-UK 0.68 0.01 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 7 0.01 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 7 NA NA 0 0 329 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 0 NA NA 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 0 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 8 34576649 60976607 2 5 329 0 2 1 1 1 0.57 0.06 6 0 0 6 3 5 13 3 3 72.72 96.58 0 0 6 3 Whitelist BRCA-UK 0.68 0.18 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 9 0.01 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 9 81244398 81289233 1 1 329 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 4 5 72.72 91.59 5.83 0 2 3 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 2 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 10 47617342 116127677 1 6 329 1 0 0 1 4 0.57 0.11 9 0 0 9 6 7 11 6 6 72.72 90.71 5.94 0 2 3 Whitelist BRCA-UK 0.93 0.29 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 8 0.01 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 11 67452292 70016346 2 10 329 1 0 1 0 8 0.57 0 15 0 0 15 3 4 31 5 6 72.72 79.42 20.16 2 14 20 Whitelist BRCA-UK 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 12 0.02 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 12 39789055 71175213 9 22 329 3 2 3 1 13 0.75 0 29 0 0 29 4 6 33 4 6 72.72 36.83 59.19 11 7 8 Whitelist BRCA-UK 0.68 0 0 0 0.83 1 Low confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 31 0.05 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 13 33627141 81483301 6 12 329 0 3 1 2 6 0.34 0.01 13 0 0 13 4 9 25 5 12 72.72 6.43 93.57 0 4 2 Whitelist BRCA-UK 16 0.93 0.04 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 18 0.03 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 14 NA NA 0 0 329 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 0 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 15 NA NA 0 0 329 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 0 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 16 2388599 19726671 21 22 329 7 5 3 6 1 0.64 0 37 0 0 37 8 11 63 8 11 72.72 57.28 38.25 3 4 8 Whitelist BRCA-UK 0.76 0 0 0 0.72 1 High confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 43 0.07 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 17 37232274 80621815 55 78 329 15 13 14 13 23 0.98 0 116 0 0 116 8 8 120 8 8 72.72 42.36 52.49 0 2 5 Whitelist BRCA-UK 18 1 0 0 0 0.99 1 High confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 133 0.2 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 18 2681027 74577801 1 27 329 3 0 1 2 21 0.34 0 39 0 0 39 6 7 45 6 7 72.72 91.99 3.01 2 4 5 Whitelist BRCA-UK 0.84 0 0 0 0.59 1 Linked to high confidence BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA With other complex events 33 0.05 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 19 18555351 28300401 10 39 329 3 2 3 2 29 0.94 0 47 0 0 47 3 6 58 5 6 72.72 56.61 35.85 3 7 14 Whitelist BRCA-UK 0.68 0 0 0 0.96 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 49 0.07 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 20 NA NA 0 0 329 0 0 0 0 0 NA 0.57 NA 0 NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.79 0 NA NA 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 0 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 21 44806064 44951745 1 1 329 0 1 0 0 0 0.39 0.61 2 0 NA NA NA NA 6 3 5 72.72 77.35 0 0 6 7 Whitelist BRCA-UK 0.62 0.82 0 NA 0.59 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 2 0 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 22 26698536 47784266 4 16 329 1 0 1 2 12 0.57 0 23 0 0 23 4 8 27 4 5 72.72 75.8 12.47 6 2 1 Whitelist BRCA-UK 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 20 0.03 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230728 X 25323511 114754692 4 11 329 2 0 1 1 7 0.57 0.9 10 0 0 10 3 7 13 5 7 72.72 33.88 62.74 0 2 3 Whitelist BRCA-UK 0.74 1 0 0 0.64 1 No BRCA-UK CGP_donor_1230728 BRCA 0.27 3.5 Breast-AdenoCA NA 15 0.02 NA 7 BRCA-UK DO1015 CGP_donor_1230728 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 1 52686225 58856084 10 10 107 3 2 2 3 0 0.94 0 10 0 0 10 4 7 13 4 8 39.64 39.36 57.6 12 2 1 Whitelist BRCA-UK 0.96 0 0 0 0.96 1 Low confidence BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA With other complex events 20 0.09 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 2 144963829 151323931 1 2 107 1 1 0 0 0 0.57 0.01 3 NA 0 NA NA NA NA NA NA 39.64 0.01 99.89 4 2 3 Whitelist BRCA-UK 0.68 0.04 NA 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 3 75567150 77492243 1 5 107 0 1 1 0 3 0.57 0.71 7 0 0 7 0 3 10 0 3 39.64 39.22 57.72 0 4 1 Whitelist BRCA-UK 0.62 0.9 0 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 7 0.03 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 4 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 5 NA NA 0 0 107 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.21 NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 6 109552399 109631814 3 3 107 1 0 1 1 0 0.8 0.69 3 0 0 NA NA NA 5 3 3 39.64 1.18 98.66 1 2 1 Whitelist BRCA-UK 0.87 0.89 0 0 0.84 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 6 0.03 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 7 50471157 50552256 1 1 107 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 39.64 0 99.78 0 2 NA Whitelist BRCA-UK 0.62 0.12 NA NA 0.59 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 8 124048179 128424963 5 5 107 1 0 2 2 0 0.53 0 7 0 0 7 5 5 20 7 8 39.64 80.13 19.86 8 1 3 Whitelist BRCA-UK 0.68 0.01 0 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 10 0.05 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 9 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 10 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 11 NA NA 0 0 107 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.2 NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 12 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 13 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 14 54690231 74842594 2 4 107 0 0 1 1 2 0.57 0 2 0 0 NA NA NA 18 11 12 39.64 81.23 15.06 0 1 2 Whitelist BRCA-UK 0.62 0 0 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 6 0.03 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 15 26474340 77801410 1 7 107 0 1 2 0 4 0.3 0.01 7 0 0 7 3 3 9 4 4 39.64 73.29 26.58 8 2 3 Whitelist BRCA-UK 0.68 0.05 0 0 0.59 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 10 0.05 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 16 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 17 28019227 37958591 6 8 107 1 3 1 1 2 0.57 0 6 0 0 6 0 3 13 3 3 39.64 95.57 0 10 1 6 Whitelist BRCA-UK 0.87 0 0 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 14 0.07 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 18 NA NA 0 0 107 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.77 NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 19 8613441 20173982 3 3 107 0 1 1 1 0 0.8 0.16 1 0 0 NA NA NA NA NA NA 39.64 0 99.83 3 2 NA Whitelist BRCA-UK 0.87 0.37 0 0 0.84 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 6 0.03 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 20 6325435 58598408 1 2 107 1 1 0 0 0 0.57 1 6 NA 0 6 4 6 7 5 5 39.64 5.15 93.86 2 2 1 Whitelist BRCA-UK 0.68 1 NA 0 0.64 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 21 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 22 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230729 X 108395802 120251740 15 15 107 3 3 5 4 0 0.87 0 7 0 0 7 7 7 10 10 10 39.64 44.07 55.7 0 1 2 Whitelist BRCA-UK 0.93 0 0 0 0.9 1 High confidence BRCA-UK CGP_donor_1230729 BRCA 0.52 1.7 Breast-AdenoCA Canonical without polyploidization 30 0.14 NA 2 BRCA-UK DO1016 CGP_donor_1230729 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1230778 1 30154115 107830373 26 31 182 8 9 4 5 5 0.45 0 44 0 0 44 5 10 65 5 10 67.01 75.29 21.74 0 2 4 Whitelist BRCA-UK 0.7 0 0 0 0.64 1 Low confidence BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA With other complex events 57 0.16 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 2 40643037 141133868 1 2 182 0 2 0 0 0 0.11 0 5 0.02 0 5 3 3 6 3 4 67.01 97.33 0 0 3 4 Whitelist BRCA-UK 0.54 0.01 0.02 0 0.48 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 3 3724651 176370147 1 2 182 0 2 0 0 0 0.11 0 5 NA 0.04 5 3 5 6 3 3 67.01 0.55 96.36 0 2 4 Whitelist BRCA-UK 0.54 0 NA 0.04 0.48 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 4 48516722 91179385 1 2 182 1 1 0 0 0 0.57 0.01 5 0 0 5 3 3 7 3 4 67.01 64.81 32.81 0 3 5 Whitelist BRCA-UK 0.68 0.05 0 0 0.64 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 5 NA NA 0 0 182 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 6 5750165 170904138 54 57 182 11 13 15 15 3 0.85 0 54 0 0 54 12 13 55 12 13 67.01 59.8 37.21 0 2 4 Whitelist BRCA-UK 0.93 0 0 0 0.89 1 High confidence BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA With other complex events 111 0.3 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 7 28317120 155089764 2 2 182 0 0 2 0 0 0.11 0.51 5 0 0 5 0 4 10 5 5 67.01 94.91 2.34 0 4 2 Whitelist BRCA-UK 0.54 0.75 0 0 0.48 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 8 109756018 141756035 4 10 182 3 0 0 1 6 0.11 0 13 0 0 13 3 6 26 4 8 67.01 28.55 71.44 0 2 3 Whitelist BRCA-UK 0.62 0.02 0 0 0.48 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 14 0.04 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 9 31975245 32023398 1 1 182 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 67.01 22.67 77.2 0 0 2 Whitelist BRCA-UK 0.62 0.32 NA NA 0.59 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 10 99340982 130768296 3 13 182 2 0 1 0 10 0.3 0.03 14 0 0 14 4 5 20 5 5 67.01 83.27 13.3 1 2 4 Whitelist BRCA-UK 0.68 0.11 0 0 0.59 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 16 0.04 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 11 43615594 121225811 1 3 182 1 2 0 0 0 0.3 0.05 6 0 0 6 3 5 7 3 3 67.01 99.23 0.21 0 4 2 Whitelist BRCA-UK 0.62 0.17 0 0 0.59 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 12 NA NA 0 0 182 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.06 NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 13 48782545 63626731 3 3 182 1 0 1 1 0 0.8 0.68 4 0 0 4 3 4 14 5 6 67.01 64.86 32.36 0 0 1 Whitelist BRCA-UK 0.87 0.88 0 0 0.84 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 14 37087268 60780085 1 3 182 0 3 0 0 0 0.03 1 6 0 0 6 5 6 11 5 9 67.01 96.29 0 0 6 8 Whitelist BRCA-UK 0.41 1 0 0 0.33 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 6 0.02 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 15 NA NA 0 0 182 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 16 NA NA 0 0 182 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 17 NA NA 0 0 182 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.27 NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 18 68280799 68750276 1 1 182 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 4 67.01 20.29 75.06 0 2 3 Whitelist BRCA-UK 0.62 0.27 NA NA 0.59 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 2 0.01 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 19 NA NA 0 0 182 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.52 NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 20 NA NA 0 0 182 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 21 17917866 45953174 1 7 182 1 0 1 1 4 0.8 0 8 0 0 8 3 6 9 3 6 67.01 76.15 0 0 6 9 Whitelist BRCA-UK 1 0.68 0 0 0 0.84 1 Linked to low confidence BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA With other complex events 10 0.03 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 22 NA NA 0 0 182 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230778 X NA NA 0 0 182 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.01 NA NA NA 1 No BRCA-UK CGP_donor_1230778 BRCA 0.24 3.39 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO1017 CGP_donor_1230778 female deceased C50.412 surgery unknown 49 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 1 10186027 116894133 3 11 502 1 1 2 2 5 0.88 0.02 32 0 0 32 11 15 85 11 15 47.82 80.56 19.41 0 3 4 Whitelist BRCA-UK 0.98 0.08 0 0 0.91 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 False positive; manually removed BRCA-UK::CGP_donor_1230785 2 2703128 76418672 9 11 502 2 4 2 1 2 0.55 0.38 25 0 0 25 6 8 50 6 11 47.82 81.01 16.3 0 3 4 Whitelist BRCA-UK 0.87 0.63 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA With other complex events 20 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 3 124060341 197545584 4 5 502 1 0 1 2 1 0.57 0.01 14 0 0 14 5 7 18 5 7 47.82 9.31 90.57 0 2 5 Whitelist BRCA-UK 0.68 0.05 0 0 0.64 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 4 9884750 10132318 3 3 502 1 0 1 1 0 0.8 0.06 4 0 0 4 3 4 22 4 7 47.82 4.2 95.78 0 4 1 Whitelist BRCA-UK 0.87 0.19 0 0 0.84 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 5 17186253 113918417 1 10 502 2 3 1 1 3 0.67 0 10 0 0 10 3 6 15 3 4 47.82 32.19 65.14 0 3 2 Whitelist BRCA-UK 3 0.96 0 0 0 0.74 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 6 13316067 161857376 1 47 502 1 5 2 0 39 0.07 0 41 0 0 41 8 13 43 8 13 47.82 59.39 40.45 0 3 2 Whitelist BRCA-UK 14_7 0.54 0 0 0 0.48 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 55 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 7 13714514 99103349 5 49 502 0 1 1 3 44 0.28 0 32 0 0 32 5 10 38 5 10 47.82 86.14 13.63 0 3 2 Whitelist BRCA-UK 14_6 0.68 0 0 0 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 54 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 8 37570235 43431428 5 8 502 1 2 0 2 3 0.53 0 13 0 0 13 3 4 66 4 6 47.82 96.16 0 0 3 4 Whitelist BRCA-UK 0.87 0 0 0 0.64 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 9 86395269 130844230 3 7 502 0 1 2 0 4 0.3 0.82 15 0 0 15 4 7 28 4 7 47.82 63.32 36.52 0 1 2 Whitelist BRCA-UK 1 0.62 0.96 0 0 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 10 112450592 112648435 2 2 502 0 1 0 1 0 0.57 0 3 0 0 NA NA NA 41 6 10 47.82 88.97 7.69 0 3 5 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 11 34191460 34683496 6 8 502 0 3 1 2 2 0.34 0 12 0 0 12 0 5 56 4 7 47.82 51.03 45.88 0 8 1 Whitelist BRCA-UK 0.54 0 0 0 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 12 11673629 12061641 2 2 502 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 45 4 9 47.82 20.6 79.32 0 2 3 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 13 75483346 75646621 2 2 502 0 0 1 1 0 0.57 0.81 4 0 0 4 4 4 23 7 7 47.82 27.6 72.4 0 1 2 Whitelist BRCA-UK 0.68 0.95 0 0 0.64 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 14 26989383 95106882 2 41 502 3 1 2 0 35 0.34 0 34 0 0 34 12 12 42 12 12 47.82 46.97 49.32 0 2 1 Whitelist BRCA-UK 6_7 0.93 0 0 0 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 47 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 15 50648128 91471632 1 12 502 0 4 0 0 8 0.01 0.89 13 0 0 13 8 10 15 9 11 47.82 2.64 97.23 0 2 3 Whitelist BRCA-UK 22 0.68 1 0 0 0.16 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 16 85365772 86019270 1 2 502 0 2 0 0 0 0.11 0.02 3 0.01 0 NA NA NA 11 3 7 47.82 21 73.86 0 1 2 Whitelist BRCA-UK 0.54 0.07 0.01 0 0.48 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 17 7265226 7277676 1 1 502 0 1 0 0 0 0.39 0.58 2 0 NA NA NA NA 15 6 7 47.82 25.51 70.04 0 2 3 Whitelist BRCA-UK 0.62 0.8 0 NA 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 18 9472058 60123856 1 3 502 0 3 0 0 0 0.03 0 6 0.01 0 6 3 6 7 3 7 47.82 1.22 98.74 0 2 4 Whitelist BRCA-UK 0.41 0.01 0.01 0 0.33 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 19 3396170 46398177 1 8 502 2 3 0 0 3 0.14 0.75 6 0 0 6 3 4 6 3 4 47.82 99.83 0 0 3 5 Whitelist BRCA-UK 15 0.62 0.91 0 0 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 20 3153356 48734252 1 9 502 2 1 1 1 4 0.9 0.35 14 0 0 14 8 9 19 8 8 47.82 65.73 27.27 0 2 3 Whitelist BRCA-UK 3 0.68 0.6 0 0 0.92 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 21 34716212 34830110 1 1 502 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA 5 3 5 47.82 76.47 0 0 5 NA Whitelist BRCA-UK 0.62 0.77 NA NA 0.59 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 22 28291849 43099731 1 7 502 0 4 0 0 3 0.01 0.68 8 0 0 8 8 8 9 9 9 47.82 2.99 97.01 0 2 3 Whitelist BRCA-UK 15 0.62 0.88 0 0 0.16 0 No BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1230785 X 108712192 124865542 12 19 502 5 3 2 2 7 0.57 0 23 0 0 23 5 6 65 7 8 47.82 43.43 53.1 5 6 8 Whitelist BRCA-UK 0.87 0 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1230785 BRCA 0.35 2.71 Breast-AdenoCA With other complex events 31 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 BRCA-UK DO52538 CGP_donor_1230785 female deceased C50.912 radiation therapy unknown 59 NA 0 Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1309223 1 28338545 205145609 1 4 112 3 0 0 1 0 0.11 0.22 7 0 0 7 6 7 8 7 7 48.3 58.53 41.47 0 1 2 Whitelist BRCA-UK 0.54 0.45 0 0 0.48 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 8 0.04 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 2 27611595 236749712 1 4 112 2 2 0 0 0 0.26 0.5 9 0 0 9 5 9 9 5 5 48.3 1.07 98.82 1 2 1 Whitelist BRCA-UK 0.62 0.74 0 0 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 8 0.04 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 3 NA NA 0 0 112 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.1 NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 4 11284695 54768609 1 2 112 0 2 0 0 0 0.11 0.25 5 0.03 0 5 3 5 7 3 3 48.3 69.42 28.22 0 2 1 Whitelist BRCA-UK 0.54 0.5 0.04 0 0.48 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 5 42568462 42681470 1 1 112 0 1 0 0 0 0.39 0.85 2 0 NA NA NA NA 6 3 6 48.3 39.12 58.21 0 2 3 Whitelist BRCA-UK 0.62 0.98 0 NA 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 6 NA NA 0 0 112 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.89 0 NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 7 25792588 133399071 1 1 112 0 0 0 1 0 0.39 0.53 1 0 0 NA NA NA NA NA NA 48.3 0 99.78 0 2 NA Whitelist BRCA-UK 0.62 0.76 0 0 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 8 NA NA 0 0 112 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 9 21876686 21989495 1 1 112 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 3 5 48.3 15.74 83.55 0 0 2 Whitelist BRCA-UK 0.62 0.33 NA NA 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 10 33363753 37167927 5 7 112 1 3 1 0 2 0.28 0 18 0 0 18 5 16 28 5 5 48.3 96.04 0 2 5 4 Whitelist BRCA-UK 0.77 0 0 0 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 12 0.05 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 11 33707574 102514680 1 4 112 2 1 0 0 1 0.3 0.11 7 0 0 7 3 7 10 4 4 48.3 65.41 34.16 0 1 2 Whitelist BRCA-UK 0.54 0.28 0 0 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 7 0.03 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 12 1682273 5309460 2 3 112 1 0 1 0 1 0.57 0 4 0 0 4 0 3 15 3 4 48.3 95.31 0 0 8 9 Whitelist BRCA-UK 0.87 0 0 0 0.64 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 5 0.02 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 13 20209038 76077114 1 2 112 0 1 1 0 0 0.57 0.44 8 0 0 8 6 8 10 7 7 48.3 29.03 70.97 0 2 1 Whitelist BRCA-UK 0.68 0.69 0 0 0.64 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 14 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 15 63026491 86585065 1 2 112 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA 4 3 3 48.3 45.52 54.48 0 2 3 Whitelist BRCA-UK 0.68 1 NA 0 0.64 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 16 NA NA 0 0 112 0 0 0 0 0 NA 0.55 NA 0.02 NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.77 0.02 NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 17 4941975 78946883 1 5 112 2 0 1 0 2 0.3 0.23 9 0.09 0 9 4 4 9 4 4 48.3 84.11 11.46 0 3 2 Whitelist BRCA-UK 0.93 0.47 0.09 0 0.59 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 8 0.04 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 18 NA NA 0 0 112 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.93 NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 19 NA NA 0 0 112 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 20 34688486 34709968 2 2 112 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 5 0 0 48.3 42.43 50.56 0 2 NA Whitelist BRCA-UK 0.68 0.02 0 0 0.64 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 21 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 22 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1309223 X 4845499 75434513 1 7 112 2 1 2 0 2 0.53 0.01 14 0 0 14 4 11 15 5 5 48.3 93.98 5.79 0 1 2 Whitelist BRCA-UK 0.62 0.06 0 0 0.64 0 No BRCA-UK CGP_donor_1309223 BRCA 0.47 1.75 Breast-AdenoCA NA 12 0.05 frameshift_deletion,17_7576863_-_A,CN:2 1 BRCA-UK DO52539 CGP_donor_1309223 female chemotherapy complete response 39 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1310131 1 79357813 85521750 3 3 256 0 2 1 0 0 0.3 0 6 0 0 6 3 3 62 6 6 48.1 80.96 16.06 0 1 2 Whitelist BRCA-UK 0.62 0 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 2 78034042 187450046 1 7 256 4 1 0 0 2 0.04 0.17 12 0 0 12 4 5 13 4 5 48.1 97.24 0.08 0 3 1 Whitelist BRCA-UK 0.47 0.39 0 0 0.36 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 3 150849912 194612460 2 3 256 0 0 1 1 1 0.57 0.03 1 0 0 NA NA NA 8 3 3 48.1 26.46 70.47 0 2 NA Whitelist BRCA-UK 0.62 0.1 0 0 0.64 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 4 91433370 169783480 1 5 256 2 1 0 0 2 0.3 0.13 6 0 0 6 3 6 12 3 6 48.1 22.2 77.78 0 2 1 Whitelist BRCA-UK 0.62 0.33 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 5 66331509 180211648 1 4 256 4 0 0 0 0 0.01 0.24 8 0 0 8 5 8 10 5 5 48.1 25.59 71.72 0 2 1 Whitelist BRCA-UK 0.21 0.48 0 0 0.16 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 6 8229953 120121677 1 3 256 2 1 0 0 0 0.3 0.79 10 0 0 10 7 10 16 8 15 48.1 88.34 11.51 0 3 2 Whitelist BRCA-UK 0.62 0.95 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 7 3587352 140555720 1 6 256 5 1 0 0 0 0.01 0.68 16 0 0 16 6 7 21 6 8 48.1 99.78 0 0 4 3 Whitelist BRCA-UK 0.25 0.88 0 0 0.19 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 8 37059484 62040279 6 9 256 1 0 4 1 3 0.11 0 35 0 0 35 5 9 47 6 7 48.1 73.69 22.69 0 2 4 Whitelist BRCA-UK 0.54 0 0 0 0.48 0 Low confidence BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA With other complex events 15 0.03 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 9 6440094 128052549 1 5 256 2 1 0 0 2 0.3 1 14 0 0 14 3 6 14 3 6 48.1 33.57 63.35 0 2 4 Whitelist BRCA-UK 0.62 1 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 10 630271 128162262 6 12 256 3 1 0 2 6 0.34 0 42 0 0 42 3 7 43 3 4 48.1 41.23 55.33 1 10 5 Whitelist BRCA-UK 18 1 0 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 18 0.04 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 11 19602433 110154645 1 11 256 9 2 0 0 0 0 0.07 20 0 0 20 5 6 27 5 7 48.1 78.7 20.88 0 4 7 Whitelist BRCA-UK 0.02 0.22 0 0 0.02 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 22 0.04 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 12 32649793 99329002 1 4 256 2 0 1 1 0 0.57 0.08 3 0 0 NA NA NA 4 3 3 48.1 5.57 94.35 0 2 1 Whitelist BRCA-UK 0.68 0.22 0 0 0.64 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 13 30127108 114265222 1 8 256 4 0 1 0 3 0.04 0.3 12 0 0 12 3 4 13 3 5 48.1 33.22 66 0 6 1 Whitelist BRCA-UK 0.62 0.55 0 0 0.36 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 13 0.03 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 14 35282606 105979526 1 5 256 3 1 0 0 1 0.11 0.72 7 0 0 7 3 6 10 3 3 48.1 12.1 86.99 0 2 4 Whitelist BRCA-UK 0.45 0.9 0 0 0.48 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 9 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 15 NA NA 0 0 256 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.05 NA NA NA 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 16 1528190 78901485 1 4 256 1 2 0 0 1 0.3 0.43 7 0 0 7 3 4 9 3 4 48.1 37.85 57.59 0 1 2 Whitelist BRCA-UK 0.54 0.68 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 17 816680 54154675 1 4 256 2 0 1 0 1 0.3 0.7 11 0 0 11 4 5 12 4 4 48.1 61.49 34.04 0 2 3 Whitelist BRCA-UK 0.68 0.89 0 0 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 18 32716990 73412159 1 4 256 2 0 0 0 2 0.11 0.7 4 0.01 0 4 4 4 7 5 5 48.1 19.73 75.63 0 1 2 Whitelist BRCA-UK 0.62 0.89 0.01 0 0.48 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 19 4122729 24192337 2 5 256 0 0 1 1 3 0.57 0 6 0 0 6 0 3 8 0 3 48.1 16.76 75.62 0 2 6 Whitelist BRCA-UK 0.93 0.01 0 0 0.64 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 20 14865695 15295724 3 3 256 3 0 0 0 0 0.03 0.08 2 0 0 NA NA NA 5 4 5 48.1 75.47 23.55 0 0 3 Whitelist BRCA-UK 0.41 0.22 0 0 0.33 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 21 NA NA 0 0 256 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 22 18123754 18253995 1 1 256 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 48.1 36.29 63.71 0 1 NA Whitelist BRCA-UK 0.62 0.63 NA NA 0.59 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1310131 X 7085304 138956133 1 5 256 5 0 0 0 0 0 0.11 5 0 0 5 3 5 6 3 6 48.1 0.25 96.37 0 2 1 Whitelist BRCA-UK 0.1 0.29 0 0 0.07 0 No BRCA-UK CGP_donor_1310131 BRCA 0.22 2.91 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-UK DO52540 CGP_donor_1310131 female deceased C50.2 chemotherapy complete response 52 NA 0 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 0 BRCA-UK::CGP_donor_1337235 1 37722217 226050219 1 4 116 0 4 0 0 0 0.01 0.22 11 0 0 11 6 8 12 6 6 51.41 89.65 7.07 0 2 3 Whitelist BRCA-UK 0.21 0.46 0 0 0.16 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 2 37295981 213724389 1 6 116 0 4 1 1 0 0.11 0.24 8 0 0 8 5 8 9 5 5 51.41 4.11 95.77 0 2 1 Whitelist BRCA-UK 0.54 0.48 0 0 0.48 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 3 172082724 181282693 1 3 116 1 2 0 0 0 0.3 0.07 6 0 0 6 6 6 8 7 7 51.41 44.9 51.95 0 2 3 Whitelist BRCA-UK 0.62 0.2 0 0 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 4 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 5 61479841 93776063 3 6 116 1 2 1 2 0 0.88 0 9 0 0 9 5 9 33 6 9 51.41 89.77 7.4 0 1 2 Whitelist BRCA-UK 0.93 0 0 0 0.91 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 6 20103900 21513321 2 2 116 0 1 1 0 0 0.57 0.17 5 0 0 5 3 5 8 4 4 51.41 64.13 33.03 0 2 3 Whitelist BRCA-UK 0.68 0.38 0 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 7 141951940 154886371 3 3 116 0 2 1 0 0 0.3 0.03 11 0 0 11 4 5 20 4 5 51.41 51 46.45 0 2 1 Whitelist BRCA-UK 0.62 0.12 0 0 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 8 14255763 117661509 1 3 116 1 2 0 0 0 0.3 0.29 3 0.01 0 NA NA NA NA NA NA 51.41 0.55 99.44 0 2 3 Whitelist BRCA-UK 0.62 0.54 0.01 0 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 9 13810404 14962380 4 4 116 1 0 1 2 0 0.57 0.47 5 0 0 5 5 5 7 7 7 51.41 98.29 1.01 0 1 2 Whitelist BRCA-UK 0.68 0.71 0 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 10 88398440 88831858 2 2 116 1 1 0 0 0 0.57 0.26 3 0 0 NA NA NA 9 4 4 51.41 1.81 98.02 0 2 3 Whitelist BRCA-UK 0.68 0.5 0 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 11 17489408 47547069 13 13 116 3 5 2 3 0 0.69 0 20 0 0 20 8 20 34 8 8 51.41 16.28 79.83 0 2 1 Whitelist BRCA-UK 0.8 0 0 0 0.77 1 High confidence BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA With other complex events 26 0.11 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 12 6828051 6848732 2 2 116 1 1 0 0 0 0.57 0.12 3 0 0 NA NA NA 8 5 5 51.41 24.93 71.39 0 4 3 Whitelist BRCA-UK 0.68 0.31 0 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 13 94066002 94161757 2 2 116 0 0 1 1 0 0.57 0.8 1 0 0 NA NA NA NA NA NA 51.41 100 0 0 1 NA Whitelist BRCA-UK 0.68 0.95 0 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 14 103108426 103536076 1 1 116 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 51.41 99.09 0 0 0 1 Whitelist BRCA-UK 0.62 0.52 NA NA 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 15 64949277 65548079 1 1 116 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 51.41 99.84 0 0 1 3 Whitelist BRCA-UK 0.62 0.63 NA NA 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 16 28988857 64306271 1 2 116 0 2 0 0 0 0.11 0.77 3 NA 0 NA NA NA 4 3 3 51.41 57.76 37.33 0 1 2 Whitelist BRCA-UK 0.54 0.93 NA 0 0.48 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 17 26682913 27540127 3 3 116 0 1 1 1 0 0.8 0.04 4 0 0 4 0 3 12 4 6 51.41 76.26 22.52 0 1 2 Whitelist BRCA-UK 0.87 0.13 0 0 0.84 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 18 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 19 49716945 50197283 1 1 116 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 51.41 41.9 50.82 0 2 3 Whitelist BRCA-UK 0.62 0.91 NA NA 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 20 45300221 45311719 1 1 116 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 51.41 0 99.02 0 2 NA Whitelist BRCA-UK 0.62 0.76 NA NA 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 21 38643166 39173863 1 3 116 0 0 1 2 0 0.3 0.05 4 0 0 4 3 4 5 3 3 51.41 69.98 0.31 0 2 1 Whitelist BRCA-UK 0.62 0.17 0 0 0.59 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 22 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1337235 X 31256437 112067132 1 2 116 1 1 0 0 0 0.57 0.13 3 NA 0 NA NA NA NA NA NA 51.41 0.53 99.24 0 2 1 Whitelist BRCA-UK 0.68 0.33 NA 0 0.64 1 No BRCA-UK CGP_donor_1337235 BRCA 0.64 1.6 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:1 2 BRCA-UK DO52542 CGP_donor_1337235 female alive C50 chemotherapy unknown 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 1 35632869 103544091 1 13 173 2 1 1 1 8 0.9 0.05 4 0 0 4 3 4 13 5 10 48.21 46.5 50.53 0 2 1 Whitelist BRCA-UK 0.9 0.15 0 0 0.92 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 18 0.05 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 2 146257863 227776482 6 9 173 1 2 2 1 3 0.88 0 9 0 0 9 6 6 15 6 10 48.21 39.67 57.65 0 2 1 Whitelist BRCA-UK 0.68 0.01 0 0 0.91 0 Low confidence BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA Canonical without polyploidization 15 0.04 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 3 176181336 177828820 2 2 173 0 1 0 1 0 0.57 0.1 3 0 0 NA NA NA 6 4 4 48.21 50.31 46.65 0 3 2 Whitelist BRCA-UK 0.68 0.26 0 0 0.64 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 4 NA NA 0 0 173 0 0 0 0 0 NA 0.65 NA 0 NA NA NA NA 13 10 10 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.86 0 NA NA 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 5 45998480 109726472 1 6 173 1 0 1 0 4 0.57 0.75 4 0 0 4 4 4 8 8 8 48.21 81.71 15.57 0 1 2 Whitelist BRCA-UK 2 0.62 0.92 0 0 0.64 0 Linked to low confidence BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA Canonical without polyploidization 8 0.02 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 6 75925863 163929828 1 8 173 4 2 1 0 1 0.17 0.01 14 0 0 14 5 6 21 6 6 48.21 56.62 43.25 0 2 3 Whitelist BRCA-UK 0.54 0.03 0 0 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 15 0.04 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 7 57429394 145352338 2 2 173 1 1 0 0 0 0.57 1 4 0 0 4 3 4 8 6 6 48.21 32.15 64.94 0 2 1 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 8 NA NA 0 0 173 0 0 0 0 0 NA 0.49 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.73 0 NA NA 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 9 21723643 21975441 1 1 173 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 3 3 48.21 67.57 31.73 0 0 1 Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 10 4584845 12473666 1 4 173 0 0 1 1 2 0.57 0.02 1 0 0 NA NA NA 6 0 3 48.21 71.17 25.42 0 2 NA Whitelist BRCA-UK 0.68 0.07 0 0 0.64 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 6 0.02 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 11 65080606 123348876 2 2 173 0 1 1 0 0 0.57 0.07 4 0 0 4 0 4 4 0 4 48.21 22.14 77.44 0 2 1 Whitelist BRCA-UK 0.68 0.21 0 0 0.64 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 12 56046700 76435599 2 2 173 0 1 1 0 0 0.57 0.28 3 0 0 NA NA NA 10 9 9 48.21 46.37 53.55 0 1 2 Whitelist BRCA-UK 0.68 0.52 0 0 0.64 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 13 60687701 60724327 1 1 173 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 48.21 77.01 8.83 0 1 NA Whitelist BRCA-UK 0.62 0.33 NA NA 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 14 NA NA 0 0 173 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 15 39311199 91344276 1 6 173 3 0 0 0 3 0.03 0.03 8 0 0 8 6 8 10 7 10 48.21 32.27 52.32 2 2 3 Whitelist BRCA-UK 2 0.54 0.11 0 0 0.33 0 Linked to low confidence BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA Canonical without polyploidization 9 0.03 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 16 85159500 85185893 1 1 173 0 1 0 0 0 0.39 0.64 2 NA NA NA NA NA NA NA NA 48.21 99.88 0.03 0 1 2 Whitelist BRCA-UK 0.62 0.85 NA NA 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 17 43126429 76701661 1 2 173 0 1 0 0 1 0.39 0.48 4 0 0 4 4 4 5 5 5 48.21 58.78 41.21 0 1 2 Whitelist BRCA-UK 0.68 0.72 0 0 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 3 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 18 NA NA 0 0 173 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.59 NA NA NA 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 19 40033520 40052358 1 1 173 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA NA NA NA 48.21 35.17 64.66 0 2 NA Whitelist BRCA-UK 0.62 0.37 0 NA 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 20 3488123 60830397 1 4 173 2 0 0 0 2 0.11 0.43 3 0.01 0.01 NA NA NA 5 5 5 48.21 9.93 89.1 0 1 2 Whitelist BRCA-UK 0.68 0.68 0.01 0.01 0.48 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 6 0.02 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 21 36170738 36203137 1 1 173 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA NA NA NA 48.21 0 77.35 0 2 NA Whitelist BRCA-UK 0.62 0.37 0 NA 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 22 36675217 41820730 1 2 173 0 2 0 0 0 0.11 0.46 1 0 0 NA NA NA NA NA NA 48.21 0 76.22 0 2 NA Whitelist BRCA-UK 0.54 0.71 0 0 0.48 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347720 X 56037993 80735001 1 4 173 2 0 1 0 1 0.3 0.6 3 0 0 NA NA NA 4 4 4 48.21 48.5 48.12 0 2 1 Whitelist BRCA-UK 0.62 0.82 0 0 0.59 0 No BRCA-UK CGP_donor_1347720 BRCA 0.37 1.59 Breast-AdenoCA NA 7 0.02 stopgain,17_7578263_A_G,CN:1 2 BRCA-UK DO52543 CGP_donor_1347720 female alive chemotherapy unknown 56 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 1 69242796 249143618 3 8 245 1 0 3 2 2 0.34 1 19 0 0 19 4 7 21 4 4 86.84 91.11 0 0 8 19 Whitelist BRCA-UK 0.62 1 0 0 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 14 0.03 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 2 205740 193686237 1 8 245 1 2 1 2 2 0.88 0.01 10 0 0 10 4 8 11 4 6 86.84 97.26 0 0 6 3 Whitelist BRCA-UK 0.68 0.03 0 0 0.91 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 14 0.03 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 3 NA NA 0 0 245 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 NA NA NA 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 4 109302194 109323810 1 1 245 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 86.84 97.62 0 0 5 NA Whitelist BRCA-UK 0.62 0 NA NA 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 5 4353988 106930098 1 3 245 1 1 0 0 1 0.57 0.01 6 0 0 6 3 5 7 3 3 86.84 97.33 0 0 4 3 Whitelist BRCA-UK 0.62 0.05 0 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 6 20736125 163934391 3 8 245 4 0 1 1 2 0.11 0.06 25 0 0 25 4 4 26 4 5 86.84 99.63 0.07 1 9 19 Whitelist BRCA-UK 0.54 0.18 0 0 0.48 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 14 0.03 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 7 125333829 139301854 2 4 245 0 1 2 1 0 0.57 0.32 6 0 0 6 4 6 10 4 6 86.84 99.73 0.04 0 4 6 Whitelist BRCA-UK 0.68 0.57 0 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 8 0.02 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 8 54710029 141665225 2 5 245 2 0 1 1 1 0.57 0.46 10 0 0 10 4 5 17 6 7 86.84 93.17 3.3 0 8 2 Whitelist BRCA-UK 0.68 0.71 0 0 0.64 0 Linked to low confidence BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA With other complex events 9 0.02 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 9 23722920 29534915 1 2 245 2 0 0 0 0 0.11 0.03 3 NA 0 NA NA NA 6 0 3 86.84 99.82 0 0 6 7 Whitelist BRCA-UK 0.54 0.11 NA 0 0.48 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 10 26233735 26246120 1 1 245 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 6 0 3 86.84 96.65 0 0 7 NA Whitelist BRCA-UK 0.62 0 NA NA 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 11 40331639 40386465 1 1 245 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 86.84 99.57 0 0 3 NA Whitelist BRCA-UK 0.62 0.01 NA NA 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 12 8262550 101948733 1 4 245 0 1 1 0 2 0.57 0.02 2 0.01 0 NA NA NA NA NA NA 86.84 96.26 0 0 3 7 Whitelist BRCA-UK 0.68 0.09 0.01 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 13 25444057 108478748 22 26 245 6 7 4 5 4 0.82 0 41 0 0 41 4 6 42 4 6 86.84 85.82 0 0 3 17 Whitelist BRCA-UK 8 0.92 0 0 0 0.86 0 Low confidence BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA With other complex events 48 0.1 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 14 75540835 75639312 2 2 245 2 0 0 0 0 0.11 0.03 1 NA 0 NA NA NA NA NA NA 86.84 84.09 0 0 3 NA Whitelist BRCA-UK 0.54 0.1 NA 0 0.48 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 15 56644800 57964129 2 2 245 0 0 1 1 0 0.57 0.17 1 0 0 NA NA NA NA NA NA 86.84 84.49 0 0 4 NA Whitelist BRCA-UK 0.68 0.39 0 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 16 87885609 89515238 1 2 245 1 1 0 0 0 0.57 0.23 3 0 0 NA NA NA 6 4 6 86.84 94.55 0 0 4 5 Whitelist BRCA-UK 0.68 0.46 0 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 17 8626670 8654855 1 1 245 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 86.84 95.54 0 0 5 NA Whitelist BRCA-UK 0.62 0.68 NA NA 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 18 43753748 44019011 1 1 245 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 8 5 5 86.84 99.96 0 0 4 5 Whitelist BRCA-UK 0.62 0.21 NA NA 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 19 712477 38656509 102 102 245 31 27 21 23 0 0.51 0 36 0 0 36 5 7 37 5 7 86.84 90.75 0 8 6 8 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA With other complex events 204 0.42 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 20 20303557 52570030 1 4 245 1 1 0 0 2 0.57 0.82 4 0 0 4 3 4 6 3 3 86.84 92.95 0 0 6 3 Whitelist BRCA-UK 0.62 0.96 0 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 21 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 22 32182492 32363338 2 2 245 0 0 1 1 0 0.57 1 3 NA 0 NA NA NA 4 0 0 86.84 76.22 0 0 6 8 Whitelist BRCA-UK 0.68 1 NA 0 0.64 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347737 X 46896410 138119925 1 3 245 2 0 0 1 0 0.3 0.01 2 0 0 NA NA NA NA NA NA 86.84 0.1 99.68 1 2 4 Whitelist BRCA-UK 0.62 0.05 0 0 0.59 0 No BRCA-UK CGP_donor_1347737 BRCA 0.59 5.63 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO52544 CGP_donor_1347737 female chemotherapy unknown 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 1 242909803 243048073 1 1 36 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA 6 3 3 73.87 97.03 0 0 6 8 Whitelist BRCA-UK 0.62 0.62 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 2 104636511 104829910 2 2 36 0 0 1 1 0 0.57 0.54 2 0 0 NA NA NA 5 5 5 73.87 99.88 0 0 4 5 Whitelist BRCA-UK 0.68 0.77 0 0 0.64 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 3 103694800 184410665 11 11 36 4 2 2 3 0 0.8 0 18 0 0 18 8 8 24 8 10 73.87 96.84 0 1 5 7 Whitelist BRCA-UK 0.87 0 0 0 0.84 1 High confidence BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA With other complex events 22 0.31 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 4 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 5 NA NA 0 0 36 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.9 NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 6 12952460 112797641 1 2 36 1 1 0 0 0 0.57 1 5 NA 0.02 5 5 5 8 6 6 73.87 97.29 0 0 6 5 Whitelist BRCA-UK 0.68 1 NA 0.02 0.64 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 7 16636680 17312465 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 73.87 99.78 0 0 4 5 Whitelist BRCA-UK 0.62 1 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 8 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 9 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 10 129490003 130057977 1 1 36 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA 7 3 4 73.87 96.14 0.42 0 2 4 Whitelist BRCA-UK 0.62 0.88 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 11 34462626 99811832 1 2 36 0 2 0 0 0 0.11 0.23 8 0 0 8 3 5 9 3 5 73.87 96.67 0 0 4 3 Whitelist BRCA-UK 0.54 0.47 0 0 0.48 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 12 16009164 121790485 1 3 36 0 3 0 0 0 0.03 0.24 8 0 0 8 7 8 9 7 7 73.87 99.92 0 0 3 4 Whitelist BRCA-UK 0.41 0.47 0 0 0.33 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 6 0.08 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 13 48935222 49008937 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 73.87 100 0 0 0 4 Whitelist BRCA-UK 0.62 1 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 15 64092559 64680163 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 73.87 0.57 94.55 0 2 3 Whitelist BRCA-UK 0.62 1 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 17 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 19 53128796 57941459 1 3 36 0 3 0 0 0 0.03 0.03 6 0 0 6 5 6 8 5 5 73.87 99.62 0 0 4 5 Whitelist BRCA-UK 0.41 0.12 0 0 0.33 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 6 0.08 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 20 1862523 2051546 1 1 36 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA 4 4 4 73.87 92.69 0 0 4 5 Whitelist BRCA-UK 0.62 0.77 NA NA 0.59 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347739 X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1347739 BRCA 0.32 3.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 BRCA-UK DO52545 CGP_donor_1347739 female radiation therapy unknown 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 1 35695011 87315087 5 11 551 2 1 2 0 6 0.53 0 19 0 0 19 5 12 77 9 16 29.67 59.18 40.82 0 2 3 Whitelist BRCA-UK 0.87 0 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 16 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 2 16140959 86264765 1 7 551 4 1 0 0 2 0.04 0.22 8 0 0 8 5 6 10 5 7 29.67 6.5 93.39 0 2 4 Whitelist BRCA-UK 0.41 0.45 0 0 0.36 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 12 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 3 46484048 180876957 1 14 551 5 1 1 1 6 0.11 0.93 14 0 0 14 3 6 16 3 8 29.67 3.73 96.1 0 2 4 Whitelist BRCA-UK 4 0.62 1 0 0 0.48 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 22 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 4 72170221 95721900 2 10 551 1 0 1 0 8 0.57 0.01 9 0 0 9 7 9 40 9 23 29.67 32.64 67.33 0 4 2 Whitelist BRCA-UK 0.62 0.03 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 12 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 5 53351695 54181704 3 3 551 0 3 0 0 0 0.03 0.06 4 0 0 4 4 4 11 5 5 29.67 36.37 63.51 0 2 4 Whitelist BRCA-UK 0.41 0.2 0 0 0.33 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 6 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 6 22611379 97921915 3 27 551 0 0 3 0 24 0.03 0 30 0 0 30 7 8 56 7 10 29.67 29.09 70.77 0 2 4 Whitelist BRCA-UK 1_8 0.84 0 0 0 0.33 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 30 0.03 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1347745 7 2552181 117327223 1 14 551 4 1 0 0 9 0.04 1 12 0 0 12 4 9 22 5 11 29.67 24.98 74.8 0 2 4 Whitelist BRCA-UK 1_6 0.68 1 0 0 0.36 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 19 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 8 2126333 142042839 1 17 551 5 3 0 0 9 0.03 0 30 0 0 30 9 10 33 9 10 29.67 96.45 0.13 0 3 2 Whitelist BRCA-UK 21 0.41 0.01 0 0 0.33 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 25 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 9 NA NA 0 0 551 0 0 0 0 0 NA 0.27 NA 0 NA NA NA NA 14 4 13 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.51 0 NA NA 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 10 43811883 134073174 1 8 551 1 3 0 1 3 0.28 0.15 10 0 0 10 3 6 10 3 3 29.67 1.56 98.25 0 2 4 Whitelist BRCA-UK 0.87 0.36 0 0 0.59 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 13 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 11 3044140 99240651 1 8 551 3 1 0 1 3 0.28 0.09 12 0 0 12 4 5 13 4 5 29.67 13.5 83.04 0 2 3 Whitelist BRCA-UK 21 0.62 0.24 0 0 0.59 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 13 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 12 45394892 45409667 1 1 551 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 12 6 7 29.67 18.64 81.28 0 2 4 Whitelist BRCA-UK 0.62 0.06 0 NA 0.59 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 13 58361866 94196894 1 3 551 2 0 0 0 1 0.11 0.03 5 0 0 5 3 5 5 3 3 29.67 0.13 99.87 0 2 1 Whitelist BRCA-UK 0.62 0.12 0 0 0.48 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 5 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 14 24184226 64980803 1 2 551 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 8 3 4 29.67 15.29 83.8 0 0 1 Whitelist BRCA-UK 0.54 0.02 0 0 0.48 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 4 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 15 100378697 100396910 1 1 551 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 6 3 4 29.67 0.01 95.08 0 2 NA Whitelist BRCA-UK 0.62 0.06 0 NA 0.59 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 16 6992438 15708773 1 5 551 3 0 0 0 2 0.03 0.69 10 0 0 10 4 6 19 9 13 29.67 48.73 50.14 0 2 3 Whitelist BRCA-UK 0.62 0.89 0 0 0.33 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 8 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 17 31652032 75375925 2 16 551 0 1 1 2 12 0.57 0 37 0 0 37 7 13 46 7 7 29.67 92.91 2.65 0 1 2 Whitelist BRCA-UK 1 0.79 0 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 20 0.02 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 18 34825724 47119600 1 2 551 1 1 0 0 0 0.57 0.79 7 0 0 7 3 7 18 4 7 29.67 66.89 33.08 0 2 3 Whitelist BRCA-UK 0.68 0.94 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 4 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 19 6678578 6774842 2 2 551 0 1 0 1 0 0.57 0 4 0 0 4 3 4 42 7 11 29.67 15.74 76.98 0 3 1 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 4 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 20 37147669 54302316 1 3 551 2 1 0 0 0 0.3 0.08 7 0 0 7 5 6 19 6 7 29.67 99 0.02 0 3 2 Whitelist BRCA-UK 0.62 0.22 0 0 0.59 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 6 0.01 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 21 15985713 41374391 1 18 551 4 2 3 1 8 0.57 0 27 0 0 27 5 12 31 5 6 29.67 77.3 0.06 0 3 4 Whitelist BRCA-UK 8 0.64 0 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 28 0.03 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 22 24550410 42615811 1 3 551 1 0 1 0 1 0.57 0.55 4 0 0 4 3 4 6 3 5 29.67 3.19 96.81 0 2 3 Whitelist BRCA-UK 0.87 0.78 0 0 0.64 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 5 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347745 X NA NA 0 0 551 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA 20 5 8 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.68 0 NA NA 0 No BRCA-UK CGP_donor_1347745 BRCA 0.24 2.41 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 BRCA-UK DO52546 CGP_donor_1347745 female other therapy 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 1 248270026 248396875 1 1 35 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 6 3 6 46.51 41.54 55.15 0 1 NA Whitelist BRCA-UK 0.62 1 NA NA 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 2 150768400 183987305 5 5 35 2 1 1 1 0 0.9 0.01 8 0 0 8 3 5 11 3 7 46.51 99.3 0.58 0 3 2 Whitelist BRCA-UK 0.93 0.04 0 0 0.92 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 10 0.14 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 3 86954137 87178637 2 2 35 0 0 1 1 0 0.57 1 2 NA 0 NA NA NA NA NA NA 46.51 0.11 96.37 0 1 2 Whitelist BRCA-UK 0.68 1 NA 0 0.64 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 4 99988126 140430073 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 46.51 21.16 78.83 0 1 2 Whitelist BRCA-UK 0.62 1 NA NA 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 5 4425817 166950333 1 5 35 2 0 1 0 2 0.3 0.02 7 0 0 7 4 5 7 4 5 46.51 72.03 24.83 2 3 1 Whitelist BRCA-UK 0.62 0.08 0 0 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 8 0.11 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 6 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 8 61726497 61741191 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 46.51 99.99 0 0 3 NA Whitelist BRCA-UK 0.62 1 NA NA 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 9 28956786 29165216 1 1 35 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 0 3 46.51 76.95 20.37 0 3 NA Whitelist BRCA-UK 0.62 1 NA NA 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 10 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 11 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 13 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 14 37521914 37831800 3 3 35 1 0 1 1 0 0.8 0.02 5 0 0 5 3 5 6 3 4 46.51 66.4 14.9 0 3 1 Whitelist BRCA-UK 0.87 0.09 0 0 0.84 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 6 0.09 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 15 75314547 96648369 1 4 35 1 0 0 2 1 0.3 0.02 3 0 0 NA NA NA 5 3 3 46.51 28.72 55.59 0 2 3 Whitelist BRCA-UK 0.54 0.07 0 0 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 7 0.1 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 19 NA NA 0 0 35 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.75 NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 21 17199681 28780606 1 1 35 0 1 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 46.51 0 2.48 0 2 NA Whitelist BRCA-UK 0.62 0.6 NA NA 0.59 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1347813 X 70861671 132474745 1 3 35 1 1 0 1 0 0.8 0.26 4 0 0 4 4 4 5 5 5 46.51 15.15 84.62 0 1 2 Whitelist BRCA-UK 0.87 0.5 0 0 0.84 0 No BRCA-UK CGP_donor_1347813 BRCA 0.27 2.31 Breast-AdenoCA NA 6 0.09 nonsynonymous_SNV,17_7577153_A_C,CN:2 2 BRCA-UK DO52547 CGP_donor_1347813 female other therapy NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 1 NA NA 0 0 276 0 0 0 0 0 NA 0 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 2 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 3 134692089 136270339 4 4 276 0 1 1 2 0 0.57 0.08 6 0 0 6 5 6 29 10 10 68.49 63.3 33.55 0 2 5 Whitelist BRCA-UK 0.68 0.22 0 0 0.64 1 Linked to high confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA With other complex events 8 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 4 183729295 186138441 1 2 276 0 0 1 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 68.49 99.78 0 0 3 4 Whitelist BRCA-UK 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 5 164714637 176162291 1 4 276 2 0 0 0 2 0.11 0.02 4 0 0 4 4 4 6 5 5 68.49 99.6 0.27 0 2 3 Whitelist BRCA-UK 11 0.68 0.07 0 0 0.48 1 Linked to high confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA Canonical without polyploidization 6 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 6 52987086 144067232 1 2 276 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 68.49 0.93 98.94 5 1 2 Whitelist BRCA-UK 0.54 0 NA 0 0.48 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 7 154499666 154571384 1 1 276 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA 7 4 4 68.49 99.78 0 0 5 6 Whitelist BRCA-UK 0.62 0.34 0 NA 0.59 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 8 137941793 138598612 1 1 276 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 68.49 99.89 0 0 4 5 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 9 77800927 139754035 103 113 276 33 28 21 21 10 0.26 0 130 0 0 130 5 8 135 5 8 68.49 28.93 67.97 4 8 2 Whitelist BRCA-UK 11_17 0.67 0 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA With other complex events 216 0.39 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 10 6930033 52299947 23 23 276 5 3 6 9 0 0.35 0 40 0 0 40 6 10 45 6 6 68.49 34.19 62.38 0 4 2 Whitelist BRCA-UK 0.62 0 0 0 0.59 1 Low confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA With other complex events 46 0.08 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 11 65669076 121347315 42 49 276 11 8 13 10 7 0.74 0 59 0 0 59 34 40 63 34 34 68.49 33.2 66.25 4 3 2 Whitelist BRCA-UK 5_9 0.62 0 0 0 0.82 1 High confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA With other complex events 91 0.16 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 12 30891352 41402048 1 4 276 1 0 1 0 2 0.57 0.01 7 0 0 7 5 7 8 6 6 68.49 96.13 0.13 15 3 4 Whitelist BRCA-UK 0.54 0.03 0 0 0.64 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 13 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 14 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 15 30027396 46766066 5 11 276 0 1 2 2 6 0.53 0.03 10 0 0 10 10 10 11 10 11 68.49 100 0 0 4 5 Whitelist BRCA-UK 3 0.68 0.1 0 0 0.64 1 High confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA After polyploidization 16 0.03 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 16 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 17 27282661 72008912 8 25 276 3 1 2 2 17 0.8 0 34 0 0 34 5 8 38 7 8 68.49 39.06 56.5 6 5 4 Whitelist BRCA-UK 9 0.68 0 0 0 0.84 1 Low confidence BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA With other complex events 33 0.06 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 18 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 19 28323168 28372233 1 1 276 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 68.49 99.68 0 0 3 NA Whitelist BRCA-UK 0.62 0.16 NA NA 0.59 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 20 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 21 41748119 47276643 1 2 276 2 0 0 0 0 0.11 0.78 3 NA 0 NA NA NA 5 5 5 68.49 22.41 53.47 0 1 2 Whitelist BRCA-UK 0.54 0.94 NA 0 0.48 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 22 NA NA 0 0 276 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353431 X 66375306 66509568 1 1 276 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 3 5 68.49 98.98 0.79 0 2 3 Whitelist BRCA-UK 0.62 0.02 NA NA 0.59 1 No BRCA-UK CGP_donor_1353431 BRCA 0.51 3.26 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_C_A,CN:2 3 BRCA-UK DO52548 CGP_donor_1353431 female alive chemotherapy unknown 41 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 1 115079115 118157067 5 6 185 1 3 1 0 1 0.28 0.1 15 0 0 15 0 3 48 12 12 52.59 74.03 25.97 1 8 22 Whitelist BRCA-UK 0.68 0.26 0 0 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 11 0.03 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 2 8376144 214084874 1 5 185 1 1 1 0 2 0.8 0.05 9 0 0 9 3 9 11 3 3 52.59 97.27 0.01 3 4 3 Whitelist BRCA-UK 0.93 0.15 0 0 0.84 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 8 0.02 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 3 143077850 153849871 2 2 185 0 0 1 1 0 0.57 0.19 2 0 0 NA NA NA 14 9 9 52.59 90.27 6.67 0 3 4 Whitelist BRCA-UK 0.68 0.41 0 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 4 1761066 1771766 1 1 185 0 1 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 52.59 61.29 38.5 0 3 NA Whitelist BRCA-UK 0.62 0.05 0 NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 5 149980671 149999502 1 1 185 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 7 4 4 52.59 29.47 70.4 0 1 2 Whitelist BRCA-UK 0.62 0.03 NA NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 6 279119 16681815 15 16 185 2 6 3 4 1 0.51 0 25 0 0 25 3 7 39 4 7 52.59 96.98 0 44 8 7 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 31 0.08 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 7 66614925 72946330 2 4 185 3 1 0 0 0 0.11 0.51 5 0 0 5 5 5 22 5 5 52.59 59.93 39.92 7 5 4 Whitelist BRCA-UK 0.54 0.75 0 0 0.48 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 8 0.02 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 8 110091847 124348619 2 3 185 1 0 0 1 1 0.57 0.13 6 0 0 6 4 5 22 5 5 52.59 67.14 29.44 0 5 7 Whitelist BRCA-UK 0.62 0.32 0 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 5 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 9 81930646 97226536 1 2 185 0 2 0 0 0 0.11 0.05 1 NA 0 NA NA NA NA NA NA 52.59 0 99.85 0 2 NA Whitelist BRCA-UK 0.54 0.17 NA 0 0.48 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 10 68748905 68764923 1 1 185 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 3 52.59 69.54 30.29 0 3 4 Whitelist BRCA-UK 0.62 0.17 NA NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 11 57883853 105414478 15 30 185 4 3 3 5 15 0.87 0 45 0 0 45 4 6 52 4 10 52.59 37.14 62.44 1 4 2 Whitelist BRCA-UK 0.93 0 0 0 0.9 0 Low confidence BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA With other complex events 45 0.12 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 12 128677391 128749569 1 1 185 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 52.59 0.05 99.86 0 2 3 Whitelist BRCA-UK 0.62 0.02 NA NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 13 NA NA 0 0 185 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.09 NA NA NA 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 14 59861131 100809267 1 2 185 1 1 0 0 0 0.57 0.14 4 NA 0 4 3 4 5 3 3 52.59 23.98 75.11 0 2 1 Whitelist BRCA-UK 0.68 0.33 NA 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 15 NA NA 0 0 185 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 16 89420594 89512698 1 1 185 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 52.59 98.98 0 0 3 NA Whitelist BRCA-UK 0.62 0.2 NA NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 17 42037836 42393892 1 1 185 0 1 0 0 0 0.39 0.36 2 0 NA NA NA NA 11 4 4 52.59 81.44 13.5 0 3 5 Whitelist BRCA-UK 0.62 0.61 0 NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 18 20297595 48213819 6 6 185 1 1 1 3 0 0.57 0.04 12 0 0 12 5 7 14 5 7 52.59 7.18 92.78 0 2 4 Whitelist BRCA-UK 0.68 0.13 0 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 12 0.03 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 19 13717917 21195119 3 4 185 1 1 1 0 1 0.8 0 15 0 0 15 3 5 22 4 4 52.59 68.44 31.39 0 8 2 Whitelist BRCA-UK 1 0.01 0 0 0.84 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 7 0.02 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 20 34182540 35338513 8 8 185 1 5 1 1 0 0.11 0 13 0 0 13 4 5 19 4 4 52.59 52.33 40.59 0 1 8 Whitelist BRCA-UK 0.54 0 0 0 0.48 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 16 0.04 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 21 21997355 27457446 1 2 185 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 5 52.59 77.13 0.22 0 4 2 Whitelist BRCA-UK 0.54 1 NA 0 0.48 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 22 36227395 36375527 1 1 185 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 52.59 99.02 0 0 3 NA Whitelist BRCA-UK 0.62 0.91 NA NA 0.59 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1353432 X 13651460 42199493 5 18 185 1 2 0 2 13 0.53 0 25 0 0 25 6 9 31 6 7 52.59 17.54 82.26 5 4 7 Whitelist BRCA-UK 0.99 0 0 0 0.64 0 No BRCA-UK CGP_donor_1353432 BRCA 0.89 3.18 Breast-AdenoCA NA 23 0.06 stopgain,17_7578263_A_G,CN:3 2 BRCA-UK DO52549 CGP_donor_1353432 female alive chemotherapy unknown 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 1 8061875 245884972 1 23 324 8 4 0 1 10 0.01 1 29 0 0 29 5 9 30 5 8 64.65 87.99 12 0 4 6 Whitelist BRCA-UK 0.13 1 0 0 0.16 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 36 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 2 63752965 64615547 2 4 324 0 2 0 0 2 0.11 0 5 0 0 5 3 4 52 6 7 64.65 68.98 30.91 0 11 5 Whitelist BRCA-UK 3 0.68 0 0 0 0.48 0 Linked to low confidence BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA After polyploidization 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 3 157158956 178255600 6 8 324 0 3 1 2 2 0.34 0.01 16 0 0 16 5 7 41 5 10 64.65 62.75 34.08 2 5 7 Whitelist BRCA-UK 0.62 0.05 0 0 0.59 0 Low confidence BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA With other complex events 14 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 4 12795262 186605592 1 19 324 7 8 0 0 4 0 0.32 32 0 0 32 5 8 34 5 8 64.65 61.68 35.95 1 2 3 Whitelist BRCA-UK 7 0.41 0.57 0 0 0.07 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 34 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 5 41483645 177716603 1 6 324 3 3 0 0 0 0.11 0.03 9 0 0 9 4 5 11 4 5 64.65 41.96 57.92 1 1 2 Whitelist BRCA-UK 0.54 0.11 0 0 0.48 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 6 85129042 132194042 2 8 324 1 0 0 1 6 0.57 0 14 0 0 14 4 8 39 4 5 64.65 75.73 21.05 0 4 5 Whitelist BRCA-UK 1 0.87 0 0 0 0.64 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 7 12818714 151007012 1 14 324 5 4 0 2 3 0.15 0.62 26 0 0 26 6 9 27 6 6 64.65 65.62 34.16 0 1 3 Whitelist BRCA-UK 0.62 0.84 0 0 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 25 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 8 109873224 110959417 3 4 324 0 2 1 0 1 0.3 0 3 0 0 NA NA NA 42 5 8 64.65 89.31 7.27 0 8 10 Whitelist BRCA-UK 0.68 0.02 0 0 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 9 386251 109735871 1 8 324 1 1 0 1 5 0.8 0.47 13 0 0 13 4 6 16 5 6 64.65 76.71 20.21 0 3 4 Whitelist BRCA-UK 0.87 0.72 0 0 0.84 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 10 21434993 129780447 1 8 324 4 1 1 0 2 0.11 0.89 14 0 0 14 3 4 18 3 4 64.65 81.79 14.78 0 3 1 Whitelist BRCA-UK 0.62 1 0 0 0.48 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 11 11060583 81279902 1 8 324 2 2 0 1 3 0.53 0.35 11 0 0 11 6 11 13 6 6 64.65 60.64 35.89 0 3 2 Whitelist BRCA-UK 1 0.61 0 0 0.64 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 12 290096 103088739 1 8 324 3 1 0 1 3 0.28 0.69 14 0 0 14 4 6 17 4 6 64.65 64.75 35.17 0 1 2 Whitelist BRCA-UK 0.87 0.89 0 0 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 13 42172851 96932723 1 3 324 1 1 1 0 0 0.8 0.88 3 0 0 NA NA NA 9 4 5 64.65 34.15 63.07 0 2 4 Whitelist BRCA-UK 0.87 1 0 0 0.84 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 14 35827682 102847019 1 4 324 1 3 0 0 0 0.11 0.26 9 0 0 9 4 7 12 4 10 64.65 55.41 40.88 0 3 2 Whitelist BRCA-UK 0.54 0.5 0 0 0.48 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 15 77277704 101827228 1 4 324 0 3 0 0 1 0.03 0.61 10 0 0 10 3 5 15 3 4 64.65 77.52 17.6 0 4 5 Whitelist BRCA-UK 0.54 0.83 0 0 0.33 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 16 19233000 72604301 1 9 324 3 3 0 1 2 0.28 0.39 11 0 0 11 3 4 13 3 4 64.65 95.48 0 0 3 5 Whitelist BRCA-UK 0.62 0.63 0 0 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 17 5897614 27734772 2 6 324 1 1 1 1 2 1 0 14 0 0 14 3 4 29 3 5 64.65 42.94 52.61 0 3 7 Whitelist BRCA-UK 0.93 0 0 0 1 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 18 67484074 71819288 1 2 324 1 1 0 0 0 0.57 0.49 4 0 0 4 3 4 7 3 3 64.65 26.43 73.53 0 2 1 Whitelist BRCA-UK 0.68 0.73 0 0 0.64 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 19 NA NA 0 0 324 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 15 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.04 0 NA NA 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 20 13617590 51818711 1 6 324 1 2 0 0 3 0.3 0.08 6 0 0 6 4 6 9 4 4 64.65 65.06 34.4 0 3 4 Whitelist BRCA-UK 0.68 0.23 0 0 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 21 34862907 34879233 1 1 324 0 0 0 1 0 0.39 0.61 1 0 NA NA NA NA 5 0 3 64.65 27.56 49.79 0 3 NA Whitelist BRCA-UK 0.62 0.82 0 NA 0.59 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 22 38989273 41596968 2 2 324 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 7 7 7 64.65 100 0 0 4 NA Whitelist BRCA-UK 0.68 0.03 0 0 0.64 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363963 X 31238746 128372657 1 2 324 1 1 0 0 0 0.57 0 2 0 0 NA NA NA 4 4 4 64.65 73.29 23.33 0 1 2 Whitelist BRCA-UK 0.68 0.01 0 0 0.64 0 No BRCA-UK CGP_donor_1363963 BRCA 0.18 2.98 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 1 BRCA-UK DO52550 CGP_donor_1363963 female alive C50.9 other therapy 46 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 1 18099948 235386627 1 32 330 4 11 0 0 17 0 0.01 34 0 0 34 10 12 38 10 10 53.53 73.37 23.66 0 4 3 Whitelist BRCA-UK 12_14_2_8 0.41 0.04 0 0 0.01 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 47 0.07 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 2 39603518 216873053 1 20 330 5 4 1 2 8 0.34 0.16 20 0 0 20 6 8 26 7 9 53.53 79.8 17.49 0 3 4 Whitelist BRCA-UK 0.54 0.37 0 0 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 32 0.05 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 3 68740658 98649320 4 5 330 3 0 1 0 1 0.11 0.67 10 0 0 10 3 5 34 6 6 53.53 51.44 45.38 0 1 2 Whitelist BRCA-UK 0.62 0.87 0 0 0.48 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 9 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 4 37966879 70145707 2 3 330 0 0 1 1 1 0.57 0.91 7 0 0 7 3 4 22 6 8 53.53 39.66 57.89 0 3 4 Whitelist BRCA-UK 0.62 1 0 0 0.64 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 5 57413616 155558178 1 8 330 1 5 0 0 2 0.01 0.05 8 0 0 8 5 8 13 5 5 53.53 25.61 71.72 0 2 3 Whitelist BRCA-UK 0.54 0.17 0 0 0.19 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 14 0.02 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 6 1294127 81299474 1 10 330 1 5 0 0 4 0.01 0.82 17 0 0 17 7 11 21 7 11 53.53 57.06 40.12 0 3 4 Whitelist BRCA-UK 0.54 0.96 0 0 0.19 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 16 0.02 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 7 30963947 152651497 1 15 330 0 9 0 0 6 0 0.02 21 0 0 21 6 7 25 6 9 53.53 80.15 17.3 0 3 4 Whitelist BRCA-UK 11_2 0.12 0.08 0 0 0 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 24 0.04 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 8 71179052 135610541 1 7 330 0 4 0 0 3 0.01 0.13 12 0 0 12 6 9 19 6 9 53.53 73.41 26.48 0 6 5 Whitelist BRCA-UK 14 0.54 0.32 0 0 0.16 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 11 0.02 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 9 118836702 119192423 2 2 330 0 0 1 1 0 0.57 0.57 1 0 0 NA NA NA 12 4 4 53.53 68.63 30.67 0 2 NA Whitelist BRCA-UK 0.68 0.79 0 0 0.64 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 10 20876645 21764807 2 2 330 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 27 6 6 53.53 65.79 30.76 0 6 7 Whitelist BRCA-UK 0.54 0.01 0 0 0.48 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 11 55966916 128220242 1 7 330 1 2 0 0 4 0.3 0.3 8 0 0 8 8 8 11 9 9 53.53 15.53 80.68 0 2 3 Whitelist BRCA-UK 7 0.77 0.54 0 0 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 12 566657 122788031 1 17 330 3 5 2 0 7 0.16 0.07 21 0 0 21 6 9 21 6 6 53.53 33.46 62.24 0 5 6 Whitelist BRCA-UK 1 0.59 0.2 0 0 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 27 0.04 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 13 24638608 24666884 1 1 330 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 8 3 3 53.53 58.08 41.92 0 3 4 Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 14 19471745 33853659 3 9 330 0 1 2 0 6 0.3 0 17 0 0 17 5 5 31 10 13 53.53 78.32 20.77 0 3 4 Whitelist BRCA-UK 1 0.62 0 0 0 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 15 63063770 93427758 1 6 330 0 2 0 0 4 0.11 0.74 6 0 0 6 4 6 12 5 6 53.53 29.52 65.7 0 2 3 Whitelist BRCA-UK 8 0.68 0.91 0 0 0.48 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 8 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 16 8762035 27960468 2 6 330 0 2 0 0 4 0.11 0 6 0 0 6 3 6 17 4 6 53.53 55.79 39.42 0 3 4 Whitelist BRCA-UK 2 0.62 0 0 0 0.48 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 8 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 17 29118623 79825362 1 4 330 0 3 0 0 1 0.03 0.12 7 0 0 7 7 7 7 7 7 53.53 16.78 83.22 0 2 3 Whitelist BRCA-UK 0.54 0.31 0 0 0.33 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 18 2845527 2855965 1 1 330 1 0 0 0 0 0.39 0.23 1 0.22 NA NA NA NA 4 0 3 53.53 94.9 0 0 4 NA Whitelist BRCA-UK 0.62 0.47 0.22 NA 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 19 7181706 59087312 1 12 330 2 4 2 0 4 0.26 0 18 0 0 18 5 6 19 5 7 53.53 98.06 1.7 0 3 4 Whitelist BRCA-UK 8 0.68 0 0 0 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 20 0.03 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 20 90322 60896365 1 11 330 0 6 1 0 4 0 0.01 15 0 0 15 4 5 16 4 5 53.53 76.04 16.89 0 3 4 Whitelist BRCA-UK 0.41 0.03 0 0 0.09 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 18 0.03 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 21 19540420 19554538 1 1 330 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 53.53 53.78 23.26 0 4 NA Whitelist BRCA-UK 0.62 1 0 NA 0.59 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 22 24215006 25317511 2 2 330 0 0 1 1 0 0.57 0.8 2 0 0 NA NA NA 5 5 5 53.53 0.27 99.73 0 2 3 Whitelist BRCA-UK 0.68 0.95 0 0 0.64 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363965 X 16226471 112183212 1 6 330 1 0 1 1 3 0.8 0.61 3 0 0 NA NA NA 8 5 6 53.53 27.39 72.38 0 2 3 Whitelist BRCA-UK 1 0.68 0.83 0 0 0.84 0 No BRCA-UK CGP_donor_1363965 BRCA 0.28 2.9 Breast-AdenoCA NA 9 0.01 NA 2 BRCA-UK DO52551 CGP_donor_1363965 female alive C50.9 other therapy 36 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 1 20593050 248597403 1 39 680 2 12 2 1 22 0 0 59 0 0 59 8 9 59 8 9 50.12 48.6 47.93 6 4 2 Whitelist BRCA-UK 10_15_2_4 0.02 0.02 0 0 0.02 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 56 0.04 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 2 24204828 232125014 1 38 680 1 9 1 1 26 0 0 52 0 0 52 13 18 58 13 13 50.12 67.04 30.22 0 3 2 Whitelist BRCA-UK 1_16_4_7_9 0.62 0 0 0 0.06 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 50 0.04 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 3 84135983 108939365 2 5 680 1 1 0 0 3 0.57 0 11 0 0 11 5 8 52 9 11 50.12 38.76 58.08 6 2 3 Whitelist BRCA-UK 15 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 7 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 4 46814412 190722755 2 26 680 1 0 1 2 22 0.57 0.05 25 0 0 25 10 14 35 10 10 50.12 44.3 53.25 1 2 1 Whitelist BRCA-UK 1_2 1 0.15 0 0 0.64 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 30 0.02 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 5 2422288 164394854 1 22 680 3 7 1 2 9 0.09 0.81 29 0 0 29 8 15 31 8 17 50.12 74.82 22.51 0 3 2 Whitelist BRCA-UK 10_6 0.62 0.96 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 35 0.03 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 6 36900445 168143782 1 18 680 0 5 2 3 8 0.16 0.04 21 0 0 21 5 5 33 5 9 50.12 74.64 25.19 0 3 2 Whitelist BRCA-UK 3 0.62 0.15 0 0 0.59 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 28 0.02 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 7 27659585 152414312 1 20 680 1 6 0 1 12 0.01 0.15 23 0 0 23 9 12 26 9 12 50.12 77.98 19.42 0 3 4 Whitelist BRCA-UK 10_2_6 0.68 0.35 0 0 0.21 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 28 0.02 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 8 2570153 144678331 1 26 680 3 7 3 0 13 0.05 0.05 22 0 0 22 4 6 22 4 6 50.12 58.9 37.68 0 3 4 Whitelist BRCA-UK 14_2_3_6 0.54 0.17 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 39 0.03 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 9 8324435 130965084 1 12 680 0 5 2 0 5 0.02 0.62 22 0 0 22 5 8 27 10 10 50.12 63.45 35.85 1 3 4 Whitelist BRCA-UK 2 0.45 0.83 0 0 0.33 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 19 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 10 15925151 65636395 1 6 680 0 2 0 0 4 0.11 1 14 0 0 14 7 14 22 7 16 50.12 62.22 34.25 1 3 4 Whitelist BRCA-UK 15_7 0.68 1 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 8 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 11 43297033 45227289 2 3 680 0 2 0 0 1 0.11 0.27 4 0 0 4 0 3 20 4 5 50.12 46.5 53.07 0 2 3 Whitelist BRCA-UK 0.62 0.52 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 5 0 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 12 82571868 99035707 1 3 680 0 3 0 0 0 0.03 0 3 0 0 NA NA NA 6 5 5 50.12 2.63 97.29 0 2 3 Whitelist BRCA-UK 0.41 0 0 0 0.33 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 6 0 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 13 NA NA 0 0 680 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 13 4 7 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.03 0 NA NA 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 0 0 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 14 19046168 100653097 1 17 680 1 3 0 0 13 0.11 0.66 10 0 0 10 5 10 12 5 12 50.12 22.17 74.28 0 2 4 Whitelist BRCA-UK 15_20 0.77 0.87 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 21 0.02 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 15 49453754 101270859 1 24 680 2 6 0 1 15 0.03 0 20 0 0 20 6 10 25 6 6 50.12 60.65 34.48 0 6 5 Whitelist BRCA-UK 10_14_3 0.68 0 0 0 0.33 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 33 0.02 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 16 19133814 74653923 1 9 680 0 4 0 0 5 0.01 0.4 11 0 0 11 7 11 12 7 11 50.12 36.06 63.62 0 3 2 Whitelist BRCA-UK 2 0.48 0.65 0 0 0.16 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 13 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 17 40110268 47309941 1 4 680 1 2 0 0 1 0.3 0.04 5 0 0 5 4 5 11 4 7 50.12 47.14 52.85 0 3 4 Whitelist BRCA-UK 0.68 0.15 0 0 0.59 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 7 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 18 13730381 68688627 1 8 680 3 2 0 0 3 0.14 0.55 7 0 0 7 3 5 9 3 4 50.12 26.03 69.31 2 2 5 Whitelist BRCA-UK 0.54 0.78 0 0 0.59 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 13 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 19 31677503 32151212 12 24 680 4 2 4 2 12 0.72 0 3 0 0 NA NA NA 17 5 8 50.12 81.95 10.77 0 2 3 Whitelist BRCA-UK 4 0.97 0 0 0 0.8 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 36 0.03 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 20 1630405 49787636 1 9 680 0 6 0 0 3 0 0.69 6 0 0 6 6 6 7 7 7 50.12 99.03 0 0 3 4 Whitelist BRCA-UK 14 0.12 0.89 0 0 0.03 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 15 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 21 10785441 47214482 30 33 680 12 9 4 5 3 0.14 0 36 0 0 36 12 18 36 12 17 50.12 7.79 67.9 0 3 2 Whitelist BRCA-UK 0.54 0 0 0 0.59 1 High confidence BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA With other complex events 63 0.05 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 22 NA NA 0 0 680 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 0 0 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1363969 X 10198403 153946178 1 10 680 4 2 0 0 4 0.06 0 7 0 0 7 3 4 8 3 5 50.12 0.62 96 0 2 3 Whitelist BRCA-UK 14_15 0.86 0 0 0 0.48 1 No BRCA-UK CGP_donor_1363969 BRCA 0.45 2.61 Breast-AdenoCA NA 16 0.01 frameshift_insertion,17_7579405_G_-,CN:2 2 BRCA-UK DO52552 CGP_donor_1363969 female alive C50.9 other therapy 62 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 1 41315045 151823458 3 5 273 1 0 1 1 2 0.8 0.21 8 0 0 8 5 8 20 11 11 45.64 29.65 70.35 0 2 1 Whitelist BRCA-UK 0.68 0.44 0 0 0.84 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 2 3601850 25234626 3 3 273 0 0 1 2 0 0.3 0.08 4 0 0 4 3 4 16 8 9 45.64 31.21 68.68 0 2 3 Whitelist BRCA-UK 0.62 0.23 0 0 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 3 38271667 175231321 2 2 273 0 0 1 1 0 0.57 0.48 4 0 0 4 3 4 7 4 4 45.64 45.39 51.21 1 2 1 Whitelist BRCA-UK 0.68 0.72 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 4 80848150 101321582 2 2 273 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 5 3 3 45.64 99.76 0.03 0 1 NA Whitelist BRCA-UK 0.68 0.05 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 5 118606358 120994724 2 2 273 0 0 1 1 0 0.57 0.32 1 0 0 NA NA NA 10 7 7 45.64 25.75 71.58 0 2 NA Whitelist BRCA-UK 0.68 0.57 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 6 12789227 162322086 1 15 273 2 10 0 0 3 0 0.16 18 0 0 18 13 15 20 13 15 45.64 1.34 98.51 1 2 3 Whitelist BRCA-UK 8 0.13 0.37 0 0 0.01 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 27 0.05 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 7 3491751 32247663 2 4 273 0 0 2 2 0 0.26 0.18 6 0 0 6 3 5 12 5 7 45.64 33.89 65.89 0 2 1 Whitelist BRCA-UK 0.62 0.39 0 0 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 8 19513801 142877712 1 13 273 0 7 0 0 6 0 0.58 6 0 0 6 5 6 8 5 5 45.64 23.85 76.15 2 2 3 Whitelist BRCA-UK 6 0.41 0.8 0 0 0.01 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 9 27471518 131907589 1 5 273 0 2 0 0 3 0.11 0.35 6 0.01 0 6 5 6 8 5 8 45.64 87.38 10.1 0 1 2 Whitelist BRCA-UK 0.93 0.6 0.01 0 0.48 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 10 71445511 101645664 1 7 273 3 3 1 0 0 0.28 1 9 0 0 9 4 9 12 5 5 45.64 35.62 64.21 0 1 2 Whitelist BRCA-UK 0.62 1 0 0 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 11 595275 134017932 1 14 273 1 7 0 1 5 0 0.01 14 0 0 14 5 7 15 5 5 45.64 38.06 61.52 3 2 1 Whitelist BRCA-UK 0.49 0.06 0 0 0.11 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 12 10152317 100526738 1 4 273 0 3 0 0 1 0.03 0.11 8 0 0 8 4 5 10 4 7 45.64 84.94 14.97 1 1 2 Whitelist BRCA-UK 0.54 0.29 0 0 0.33 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 13 42137927 103949239 1 2 273 1 1 0 0 0 0.57 0.18 2 0 0 NA NA NA NA NA NA 45.64 31.1 68.9 0 1 2 Whitelist BRCA-UK 0.68 0.4 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 14 24555791 69149285 1 5 273 0 3 0 1 1 0.11 1 7 0 0 7 3 7 7 3 3 45.64 98.97 0.12 0 1 2 Whitelist BRCA-UK 0.62 1 0 0 0.48 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 15 22497156 81156375 1 8 273 1 4 0 0 3 0.04 0.2 11 0 0 11 4 6 11 4 4 45.64 39.45 60.55 0 2 3 Whitelist BRCA-UK 0.54 0.42 0 0 0.36 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 16 10524566 86181474 1 6 273 0 3 0 0 3 0.03 0.06 5 0 0 5 4 5 6 4 4 45.64 26.05 73.84 2 2 3 Whitelist BRCA-UK 0.62 0.18 0 0 0.33 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 17 3731089 3744645 1 1 273 0 1 0 0 0 0.39 0.13 2 0.22 NA NA NA NA NA NA NA 45.64 99.94 0.04 0 1 2 Whitelist BRCA-UK 0.62 0.32 0.23 NA 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 18 2796867 2810663 1 1 273 0 1 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 45.64 75.39 24.56 0 3 NA Whitelist BRCA-UK 0.62 0.7 0 NA 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 19 10725089 54491960 1 5 273 1 2 0 0 2 0.3 0.51 2 0 0 NA NA NA 4 3 3 45.64 38.89 60.94 3 1 2 Whitelist BRCA-UK 0.93 0.75 0 0 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 20 48219768 60970101 1 2 273 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 5 0 4 45.64 4.64 94.4 0 2 3 Whitelist BRCA-UK 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 21 32899280 32960872 2 2 273 1 0 0 1 0 0.57 0.02 3 0 0 NA NA NA 9 5 5 45.64 0.76 76.59 0 2 1 Whitelist BRCA-UK 0.68 0.08 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 22 19797781 38526661 1 4 273 1 1 0 0 2 0.57 0 1 0 0 NA NA NA NA NA NA 45.64 0.02 99.98 0 2 NA Whitelist BRCA-UK 1 0.01 0 0 0.64 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1374619 X 56166758 149862345 1 3 273 0 2 0 1 0 0.3 0.21 5 0 0 5 5 5 5 5 5 45.64 99.62 0.15 0 1 2 Whitelist BRCA-UK 0.62 0.44 0 0 0.59 0 No BRCA-UK CGP_donor_1374619 BRCA 0.38 1.62 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52553 CGP_donor_1374619 female alive C50.4 chemotherapy complete response 30 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 1 213294031 229731679 2 4 341 0 1 1 2 0 0.57 0.01 2 0 0 NA NA NA 24 7 7 40.88 27.03 72.96 0 2 3 Whitelist BRCA-UK 0.68 0.05 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 8 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 2 63449062 83490235 4 4 341 0 1 2 1 0 0.57 0.02 5 0 0 5 3 5 31 9 13 40.88 34.8 65.1 0 2 3 Whitelist BRCA-UK 0.68 0.08 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 8 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 3 7876202 196628059 1 15 341 1 13 0 0 1 0 0.52 20 0 0 20 8 9 21 9 9 40.88 14.49 85.48 0 2 3 Whitelist BRCA-UK 0 0.76 0 0 0 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 29 0.04 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 4 19585947 184107233 1 11 341 4 4 0 0 3 0.05 0.06 7 0 0 7 7 7 7 7 7 40.88 75.63 22 1 1 2 Whitelist BRCA-UK 0.68 0.2 0 0 0.46 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 19 0.03 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 5 113462182 114938620 2 2 341 0 0 1 1 0 0.57 0.82 3 0 0 NA NA NA 19 12 12 40.88 82.93 14.4 0 1 2 Whitelist BRCA-UK 0.68 0.96 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 6 145473637 146312829 2 2 341 0 0 1 1 0 0.57 0.49 2 0 0 NA NA NA 13 7 7 40.88 19.69 80.17 0 2 3 Whitelist BRCA-UK 0.68 0.74 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 7 6389159 157049440 1 16 341 0 10 0 1 5 0 0.63 15 0 0 15 7 15 16 7 7 40.88 15.09 82.5 0 2 3 Whitelist BRCA-UK 0 0.84 0 0 0 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 27 0.04 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 8 28416833 125849825 3 11 341 1 2 1 2 5 0.88 0.01 15 0 0 15 7 7 26 7 7 40.88 66.17 33.83 0 2 3 Whitelist BRCA-UK 0.62 0.06 0 0 0.91 1 High confidence BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA With other complex events 17 0.02 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 9 139644651 139655933 2 2 341 0 0 1 1 0 0.57 0.58 1 0 0 NA NA NA 10 4 4 40.88 18.73 80.57 0 1 NA Whitelist BRCA-UK 0.68 0.8 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 10 87526071 102598332 2 5 341 1 1 0 0 3 0.57 0.12 5 0 0 5 0 4 9 4 6 40.88 33.99 65.84 0 1 2 Whitelist BRCA-UK 0.68 0.3 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 7 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 11 111468211 118927396 2 2 341 1 0 1 0 0 0.57 0.12 3 0 0 NA NA NA 11 3 8 40.88 54.7 45.21 0 1 2 Whitelist BRCA-UK 0.68 0.31 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 12 1179601 99771099 1 13 341 1 3 1 0 8 0.28 0.44 14 0 0 14 5 7 16 6 8 40.88 71 28.91 0 6 5 Whitelist BRCA-UK 0.68 0.69 0 0 0.59 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 18 0.03 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 13 26769099 110922979 1 13 341 1 3 0 0 9 0.11 0.3 10 0 0 10 8 10 10 8 8 40.88 10.74 89.26 0 2 1 Whitelist BRCA-UK 0.41 0.55 0 0 0.48 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 17 0.02 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 14 70658191 81844145 3 3 341 1 0 1 1 0 0.8 0.88 3 0 0 NA NA NA 5 3 3 40.88 68.65 27.64 0 1 0 Whitelist BRCA-UK 0.87 1 0 0 0.84 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 6 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 15 41041414 100179504 1 6 341 0 5 0 0 1 0 0.51 3 0 0 NA NA NA 5 4 5 40.88 36.29 58.93 0 2 1 Whitelist BRCA-UK 0.25 0.75 0 0 0.07 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 11 0.02 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 16 1633952 85123238 1 14 341 1 8 0 0 5 0 0.01 13 0 0 13 5 13 14 5 5 40.88 3.64 96.27 0 2 3 Whitelist BRCA-UK 0.23 0.03 0 0 0.02 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 23 0.03 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 17 5870515 76721585 1 9 341 0 1 1 2 5 0.57 0.32 11 0 0 11 6 6 12 6 6 40.88 69.98 30.02 0 2 1 Whitelist BRCA-UK 0.68 0.57 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 13 0.02 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 18 10219956 69975975 1 5 341 1 3 0 0 1 0.11 0.24 5 0 0 5 3 5 5 3 5 40.88 48.78 51.19 0 1 2 Whitelist BRCA-UK 0.45 0.47 0 0 0.48 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 9 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 19 19165003 19183348 2 2 341 0 0 1 1 0 0.57 0.33 1 0 0 NA NA NA 10 7 8 40.88 60.18 39.65 0 2 NA Whitelist BRCA-UK 0.68 0.58 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 20 7936311 45047603 1 6 341 1 1 0 1 3 0.8 0.46 7 0 0 7 4 5 9 5 5 40.88 39.85 53.04 0 3 2 Whitelist BRCA-UK 0.68 0.7 0 0 0.84 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 9 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 21 30549138 47963710 1 4 341 0 3 0 0 1 0.03 0.21 2 0 0 NA NA NA NA NA NA 40.88 7.01 70 0 2 3 Whitelist BRCA-UK 0.54 0.43 0 0 0.33 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 7 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 22 30589081 36720705 1 4 341 0 2 0 0 2 0.11 0.31 1 0 0 NA NA NA NA NA NA 40.88 0 98.16 0 2 NA Whitelist BRCA-UK 0.54 0.56 0 0 0.48 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 6 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410205 X 126934090 126964180 2 2 341 0 0 1 1 0 0.57 0.71 1 0 0 NA NA NA 13 13 13 40.88 80.85 15.78 0 1 NA Whitelist BRCA-UK 0.68 0.9 0 0 0.64 1 No BRCA-UK CGP_donor_1410205 BRCA 0.35 1.83 Breast-AdenoCA NA 4 0.01 stopgain,17_7577579_T_G,CN:1 1 BRCA-UK DO52554 CGP_donor_1410205 female alive chemotherapy unknown 46 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 1 98070309 174001374 2 2 543 0 0 1 1 0 0.57 0.23 5 0 0 5 5 5 33 19 29 59.24 16.11 83.89 0 2 3 Whitelist BRCA-UK 0.68 0.47 0 0 0.64 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 2 7281461 220585117 1 23 543 1 7 1 1 13 0.01 0.35 22 0 0 22 6 18 23 6 6 59.24 66.23 33.68 0 2 1 Whitelist BRCA-UK 1_15_22 0.64 0.61 0 0 0.23 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 33 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 3 99171032 143408096 2 4 543 2 0 0 0 2 0.11 0.05 8 0 0 8 4 6 37 7 11 59.24 67.83 28.46 0 2 3 Whitelist BRCA-UK 0.68 0.17 0 0 0.48 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 4 74048710 156409343 1 9 543 1 4 0 0 4 0.04 0.03 7 0 0 7 7 7 9 9 9 59.24 99.76 0.02 0 1 2 Whitelist BRCA-UK 11 0.62 0.12 0 0 0.36 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 5 17846653 125450250 1 10 543 0 5 0 0 5 0 0.03 6 0 0 6 5 6 6 5 6 59.24 99.84 0.03 0 1 2 Whitelist BRCA-UK 6 0.24 0.12 0 0 0.07 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 6 104341980 130925749 2 7 543 0 0 1 1 5 0.57 0.1 11 0 0 11 8 9 33 8 12 59.24 41.83 58.02 0 3 2 Whitelist BRCA-UK 20 0.96 0.27 0 0 0.64 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 7 45363442 132591136 5 14 543 1 2 1 1 9 0.9 0 20 0 0 20 5 14 36 9 16 59.24 52.36 47.41 0 3 2 Whitelist BRCA-UK 10_20_X 0.98 0 0 0 0.92 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 8 27500339 142493805 1 17 543 3 6 0 0 8 0.01 0.77 12 0 0 12 5 12 12 5 5 59.24 88.27 11.22 0 2 4 Whitelist BRCA-UK 11_6 0.62 0.93 0 0 0.21 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 9 138755946 138852958 1 1 543 1 0 0 0 0 0.39 0.66 2 0 NA NA NA NA 10 5 6 59.24 65.76 31.66 0 0 1 Whitelist BRCA-UK 0.62 0.87 0 NA 0.59 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 10 11400691 121923164 1 10 543 1 2 2 1 4 0.88 0.3 24 0 0 24 10 13 30 14 14 59.24 65.03 34.8 2 2 3 Whitelist BRCA-UK 7 0.68 0.55 0 0 0.91 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 16 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 11 2846968 112273249 1 28 543 4 15 0 1 8 0 0 37 0 0 37 9 21 43 9 9 59.24 41.01 54.79 0 2 3 Whitelist BRCA-UK 4_8_X 0.07 0 0 0 0 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 48 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 12 972252 79594700 5 7 543 3 2 0 0 2 0.14 0.84 11 0 0 11 7 7 14 10 10 59.24 55.71 44.28 0 2 1 Whitelist BRCA-UK 0.54 0.98 0 0 0.59 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1410210 13 73702293 74231939 2 4 543 0 2 0 0 2 0.11 0.16 4 0 0 4 0 3 13 4 4 59.24 46.14 53.86 0 2 4 Whitelist BRCA-UK 5 0.68 0.36 0 0 0.48 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 14 53683541 71848768 1 7 543 1 1 0 0 5 0.57 0.46 6 0 0 6 5 6 12 5 5 59.24 88.94 11.06 0 1 2 Whitelist BRCA-UK 17 0.54 0.7 0 0 0.64 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 15 49738728 90927312 1 6 543 0 2 1 1 2 0.57 0.51 5 0 0 5 5 5 5 5 5 59.24 99.82 0.06 0 1 2 Whitelist BRCA-UK 2 0.68 0.76 0 0 0.64 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 16 30665654 89444896 1 9 543 1 3 0 0 5 0.11 0.89 8 0 0 8 3 8 8 3 3 59.24 73.53 25.38 0 1 2 Whitelist BRCA-UK 2 0.85 1 0 0 0.48 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 17 65573630 68368848 1 4 543 0 2 0 0 2 0.11 0.69 4 0 0 4 4 4 7 7 7 59.24 94 5.99 0 1 2 Whitelist BRCA-UK 14 0.54 0.89 0 0 0.48 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 18 2406006 52410421 1 7 543 0 3 0 0 4 0.03 0.89 6 0 0 6 3 6 9 5 9 59.24 0.05 99.89 0 2 3 Whitelist BRCA-UK 20 0.62 1 0 0 0.33 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 19 33316747 44651410 2 4 543 0 0 1 1 2 0.57 0 6 0 0 6 3 6 9 4 4 59.24 43.62 56.21 0 2 1 Whitelist BRCA-UK 6 1 0.01 0 0 0.64 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 20 4514157 60882758 1 17 543 2 7 0 0 8 0 0 11 0 0 11 9 11 12 10 10 59.24 1.85 90.63 0 2 3 Whitelist BRCA-UK 6_7 0.54 0 0 0 0.08 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 21 NA NA 0 0 543 0 0 0 0 0 NA 0.7 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.89 0 NA NA 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 22 19178913 43266974 1 7 543 0 3 0 0 4 0.03 0.07 6 0 0 6 6 6 7 7 7 59.24 0.44 99.56 0 2 3 Whitelist BRCA-UK 2_X 0.68 0.22 0 0 0.33 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1410210 X 2605722 149833497 1 22 543 3 6 0 0 13 0.01 0.38 29 0 0 29 12 16 30 12 12 59.24 63.48 36.29 0 2 1 Whitelist BRCA-UK 11_22_6_7 0.54 0.63 0 0 0.21 0 No BRCA-UK CGP_donor_1410210 BRCA 0.66 1.56 Breast-AdenoCA NA 31 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 1 BRCA-UK DO52555 CGP_donor_1410210 female alive chemotherapy unknown 68 NA NA Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 1 55377611 236035236 1 9 172 5 0 0 0 4 0 0.89 11 0 0 11 4 6 13 4 6 52.25 84.63 12.33 0 3 4 Whitelist BRCA-UK 0.41 1 0 0 0.07 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 2 43215452 226617228 1 5 172 2 2 0 0 1 0.26 0.17 8 0 0 8 5 5 8 5 5 52.25 99.89 0 0 4 5 Whitelist BRCA-UK 0.62 0.38 0 0 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 3 NA NA 0 0 172 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 4 90112870 181353776 1 3 172 2 1 0 0 0 0.3 0.02 8 0 0 8 3 7 9 3 7 52.25 99.97 0.02 0 4 3 Whitelist BRCA-UK 0.62 0.08 0 0 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 5 45802537 45813617 1 2 172 0 1 0 0 1 0.39 0.03 3 0 NA NA NA NA 7 3 3 52.25 4.47 92.7 2 2 3 Whitelist BRCA-UK 0.68 0.1 0 NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 6 549963 68719877 1 6 172 4 1 0 0 1 0.04 0.63 6 0 0 6 3 3 7 3 3 52.25 99.86 0 0 4 5 Whitelist BRCA-UK 0.25 0.84 0 0 0.36 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 7 11209002 142700733 1 8 172 2 2 0 0 4 0.26 1 8 0 0 8 4 7 9 4 5 52.25 78.03 21.74 0 2 3 Whitelist BRCA-UK 0.62 1 0 0 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 8 35579179 56673383 2 5 172 1 1 0 0 3 0.57 0.39 4 0 0 4 0 3 13 3 3 52.25 75.76 24.24 5 3 4 Whitelist BRCA-UK 0.68 0.63 0 0 0.64 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 9 5223228 77786635 1 10 172 2 1 2 1 4 0.88 0 23 0 0 23 6 6 25 7 7 52.25 36.31 62.99 0 2 3 Whitelist BRCA-UK 0.86 0.02 0 0 0.91 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 16 0.05 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 10 38477858 113556804 1 5 172 3 1 0 0 1 0.11 1 8 0 0 8 6 8 11 6 6 52.25 38.59 61.3 0 2 4 Whitelist BRCA-UK 0.62 1 0 0 0.48 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 11 17223612 79005643 1 13 172 3 2 1 0 7 0.34 0 12 0 0 12 3 7 16 3 7 52.25 13.04 82.41 0 7 2 Whitelist BRCA-UK 9 0.8 0 0 0 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 19 0.06 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 12 5519258 24071782 15 27 172 3 2 4 6 12 0.51 0 39 0 0 39 4 5 47 4 7 52.25 94.47 1.79 2 7 8 Whitelist BRCA-UK 0.62 0 0 0 0.64 0 Low confidence BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA With other complex events 42 0.12 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 13 111098922 111160752 1 1 172 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 4 52.25 0.05 97.17 0 1 2 Whitelist BRCA-UK 0.62 0.12 NA NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 14 64097092 67509579 1 2 172 2 0 0 0 0 0.11 0.19 3 NA 0 NA NA NA NA NA NA 52.25 0.1 98.99 0 2 1 Whitelist BRCA-UK 0.54 0.4 NA 0 0.48 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 15 99424961 100024255 1 1 172 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 52.25 0.58 99.32 0 2 4 Whitelist BRCA-UK 0.62 0.49 NA NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 16 48512302 48581953 1 1 172 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 8 3 4 52.25 60.16 39.75 0 3 NA Whitelist BRCA-UK 0.62 0 0 NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 17 NA NA 0 0 172 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.96 0 NA NA 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 18 3843709 70263364 1 3 172 0 1 0 1 1 0.57 1 7 0 0 7 5 7 8 5 5 52.25 94.55 0 0 4 5 Whitelist BRCA-UK 0.62 1 0 0 0.64 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 19 NA NA 0 0 172 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 8 3 5 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.08 0 NA NA 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 20 NA NA 0 0 172 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.68 0 NA NA 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 21 36183548 36480380 1 1 172 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 7 3 3 52.25 77.35 0 0 1 3 Whitelist BRCA-UK 0.62 0.72 NA NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 22 42975119 42989441 1 1 172 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 52.25 0.03 99.97 0 1 2 Whitelist BRCA-UK 0.62 0.9 NA NA 0.59 0 No BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1456607 X 144433858 145805852 9 9 172 3 2 2 2 0 0.95 0 8 0 0 8 6 8 21 8 21 52.25 5.06 94.71 0 0 2 Whitelist BRCA-UK 0.97 0 0 0 0.97 0 Low confidence BRCA-UK CGP_donor_1456607 BRCA 0.57 3.21 Breast-AdenoCA Canonical without polyploidization 18 0.05 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 BRCA-UK DO52556 CGP_donor_1456607 female alive C50.2 chemotherapy complete response 56 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 1 10490749 235139579 1 13 366 5 2 0 1 5 0.07 0.21 18 0 0 18 4 13 19 4 6 45.43 53.91 46.09 0 2 3 Whitelist BRCA-UK 0.54 0.43 0 0 0.48 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 21 0.03 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 2 115347185 132797926 3 3 366 2 1 0 0 0 0.3 0.4 4 0 0 4 4 4 27 19 19 45.43 19.05 80.83 0 1 2 Whitelist BRCA-UK 0.62 0.64 0 0 0.59 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 6 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 3 128599014 194875398 2 8 366 2 0 1 1 4 0.57 0.15 16 0 0 16 5 8 27 8 10 45.43 70.56 29.28 0 2 3 Whitelist BRCA-UK 4 0.62 0.35 0 0 0.64 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 12 0.02 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 4 19561889 181450628 1 20 366 10 0 0 1 9 0 0.75 23 0 0 23 7 23 23 7 7 45.43 73.31 24.13 0 1 2 Whitelist BRCA-UK 13_3 0.04 0.92 0 0 0 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 31 0.04 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 5 31416901 59923452 4 8 366 1 0 2 1 4 0.57 0.13 10 0 0 10 10 10 28 10 10 45.43 82.67 14.62 0 1 2 Whitelist BRCA-UK 12 0.62 0.32 0 0 0.64 0 Linked to low confidence BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA Canonical without polyploidization 12 0.02 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1472394 6 4012667 165902670 4 7 366 0 0 2 2 3 0.26 0.23 11 0 0 11 11 11 11 11 11 45.43 0.31 96.48 1 2 1 Whitelist BRCA-UK 14 0.77 0.46 0 0 0.59 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 11 0.02 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1472394 7 124391822 128944410 5 5 366 1 0 2 2 0 0.53 0.91 2 0 0 NA NA NA 13 13 13 45.43 3.57 96.2 0 1 2 Whitelist BRCA-UK 0.68 1 0 0 0.64 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 10 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 8 103318329 103487369 3 3 366 1 0 1 1 0 0.8 0 3 0 0 NA NA NA 33 6 6 45.43 78.05 21.94 0 3 1 Whitelist BRCA-UK 0.87 0.01 0 0 0.84 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 6 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 9 91708842 91785104 1 1 366 1 0 0 0 0 0.39 0.04 1 0 NA NA NA NA NA NA NA 45.43 46.9 52.94 0 1 NA Whitelist BRCA-UK 0.62 0.15 0 NA 0.59 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 2 0 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 10 13725724 98143500 1 11 366 5 3 0 0 3 0.03 0.53 8 0 0 8 5 8 12 7 7 45.43 89.36 10.46 0 2 1 Whitelist BRCA-UK 0.49 0.76 0 0 0.33 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 19 0.03 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 11 22556697 111968889 1 11 366 7 1 0 0 3 0 0.03 6 0 0 6 6 6 7 7 7 45.43 0.13 99.31 0 1 2 Whitelist BRCA-UK 3 0.1 0.12 0 0 0.04 0 Linked to low confidence BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA Canonical without polyploidization 19 0.03 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 12 47550216 98458711 13 21 366 2 4 4 3 8 0.84 0 5 0 0 5 5 5 12 8 8 45.43 75.38 24.54 1 2 1 Whitelist BRCA-UK 11 0.89 0 0 0 0.88 0 Low confidence BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA Canonical without polyploidization 34 0.05 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 13 36695786 97964894 1 18 366 3 1 1 1 12 0.57 0.04 7 0 0 7 5 7 7 5 5 45.43 17.62 82.38 0 2 1 Whitelist BRCA-UK 14_4 0.68 0.15 0 0 0.64 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 24 0.03 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 14 38341626 81002029 1 7 366 3 0 0 0 4 0.03 0.1 7 0 0 7 7 7 8 7 7 45.43 73.7 25.39 0 1 0 Whitelist BRCA-UK 6 0.77 0.26 0 0 0.33 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 10 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 15 36422827 101724956 1 5 366 4 0 0 0 1 0.01 1 10 0 0 10 5 6 11 5 6 45.43 21.22 78.65 0 1 0 Whitelist BRCA-UK 0.45 1 0 0 0.16 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 9 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 16 53313418 83518301 4 4 366 2 1 0 1 0 0.57 0.74 3 0 0 NA NA NA 8 6 6 45.43 89.66 10.25 0 1 0 Whitelist BRCA-UK 0.68 0.91 0 0 0.64 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 8 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 17 57277423 61923401 1 2 366 2 0 0 0 0 0.11 0.75 4 0 0 4 4 4 6 5 5 45.43 79.72 20.28 0 0 1 Whitelist BRCA-UK 0.54 0.91 0 0 0.48 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 4 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 18 13237359 51004881 1 4 366 2 0 0 0 2 0.11 1 4 0 0 4 3 4 6 3 3 45.43 88.66 6.7 0 1 0 Whitelist BRCA-UK 13 0.68 1 0 0 0.48 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 6 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 19 1851557 9764981 1 2 366 2 0 0 0 0 0.11 0.45 4 0 0 4 4 4 6 6 6 45.43 2.87 96.96 0 1 2 Whitelist BRCA-UK 0.54 0.69 0 0 0.48 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 4 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 20 8149889 48968352 1 14 366 5 3 0 3 3 0.2 0 20 0 0 20 9 9 20 9 9 45.43 17.9 74.37 0 2 1 Whitelist BRCA-UK 0.68 0.02 0 0 0.59 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 25 0.03 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 21 27741407 48071299 1 5 366 4 1 0 0 0 0.04 0.05 9 0 0 9 6 8 13 7 9 45.43 13.75 63.48 0 2 0 Whitelist BRCA-UK 0.45 0.16 0 0 0.36 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 10 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 22 NA NA 0 0 366 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 0 0 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472394 X 31947917 32449009 2 2 366 2 0 0 0 0 0.11 0.34 2 0 0 NA NA NA 17 7 7 45.43 32.48 67.29 0 1 2 Whitelist BRCA-UK 0.54 0.59 0 0 0.48 0 No BRCA-UK CGP_donor_1472394 BRCA 0.7 1.76 Breast-AdenoCA NA 4 0.01 NA 1 BRCA-UK DO52557 CGP_donor_1472394 female alive chemotherapy unknown 41 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 1 11549495 53121206 1 6 132 1 1 1 0 3 0.8 0.63 15 0 0 15 6 12 19 9 9 64.38 88.58 11.4 0 4 2 Whitelist BRCA-UK 0.93 0.84 0 0 0.84 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 2 5631272 181793522 1 7 132 0 6 1 0 0 0 0.75 14 0 0 14 4 6 19 5 7 64.38 74.79 25.11 3 4 3 Whitelist BRCA-UK 0.13 0.92 0 0 0.09 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 3 NA NA 0 0 132 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.01 NA NA NA 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 4 961770 140451424 1 4 132 1 1 0 0 2 0.57 0.11 9 0.46 0.04 9 3 6 10 3 6 64.38 88.54 9.04 0 3 2 Whitelist BRCA-UK 0.54 0.29 0.46 0.04 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 5 161143076 169493045 14 14 132 4 3 3 4 0 0.96 0 15 0 0 15 10 14 21 10 18 64.38 99.88 0 3 4 5 Whitelist BRCA-UK 0.98 0.01 0 0 0.98 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 28 0.11 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA False positive; manually removed BRCA-UK::CGP_donor_1472395 6 18204595 123376909 1 11 132 1 4 0 1 5 0.11 0.07 11 0 0 11 7 7 14 9 9 64.38 61.08 35.97 0 4 2 Whitelist BRCA-UK 0.62 0.2 0 0 0.48 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 7 16109404 17255305 1 1 132 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 7 4 6 64.38 36.51 60.41 0 3 4 Whitelist BRCA-UK 0.62 0.16 NA NA 0.59 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 8 38869863 39026597 1 1 132 0 1 0 0 0 0.39 0.69 2 0 NA NA NA NA 8 3 4 64.38 79.92 20.08 0 3 5 Whitelist BRCA-UK 0.62 0.89 0 NA 0.59 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 9 126120211 126476380 2 3 132 1 0 0 1 1 0.57 0.5 3 NA 0 NA NA NA 6 4 6 64.38 24.39 74.92 0 3 2 Whitelist BRCA-UK 0.87 0.74 NA 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 10 38453757 89733903 10 10 132 3 3 1 3 0 0.75 0.02 27 0 0 27 15 17 30 15 15 64.38 55.31 41.26 0 4 2 Whitelist BRCA-UK 0.86 0.08 0 0 0.83 0 High confidence BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA With other complex events 20 0.08 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 11 2913866 127984324 1 4 132 0 1 0 1 2 0.57 0.21 7 0 0 7 4 7 11 6 7 64.38 78.31 21.38 0 4 6 Whitelist BRCA-UK 0.62 0.44 0 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 12 30878393 31040846 1 1 132 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 5 3 3 64.38 99.92 0 0 3 4 Whitelist BRCA-UK 0.62 0.76 NA NA 0.59 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 13 113188578 113355920 1 1 132 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 64.38 0.15 85.7 0 2 3 Whitelist BRCA-UK 0.62 0.59 NA NA 0.59 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 14 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 15 28701023 57607104 20 21 132 5 5 3 7 1 0.66 0 20 0 0 20 5 10 21 5 11 64.38 5.59 78.91 0 2 3 Whitelist BRCA-UK 0.89 0 0 0 0.74 0 Low confidence BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA With other complex events 41 0.16 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 16 1452106 87716543 1 7 132 1 2 1 0 3 0.57 0.09 4 0.01 0 4 3 4 4 3 4 64.38 61.11 38.79 0 2 3 Whitelist BRCA-UK 6 0.96 0.25 0.01 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 17 8489672 8560546 2 2 132 0 1 1 0 0 0.57 0.78 3 0.01 0 NA NA NA 4 4 4 64.38 45 54.35 0 2 3 Whitelist BRCA-UK 0.68 0.94 0.01 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 18 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 19 17669170 46264723 1 2 132 1 1 0 0 0 0.57 0.75 4 NA 0 4 3 4 5 3 3 64.38 99.83 0 0 4 3 Whitelist BRCA-UK 0.68 0.91 NA 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 20 34465554 53445808 1 2 132 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 64.38 96.83 2.2 0 3 2 Whitelist BRCA-UK 0.68 1 NA 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 21 NA NA 0 0 132 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 NA NA NA 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 22 25761539 41247663 1 10 132 1 1 0 0 8 0.57 0 13 0 0 13 4 8 18 5 8 64.38 72.86 3.36 0 3 5 Whitelist BRCA-UK 1_2 0.68 0 0 0 0.64 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1472395 X 64631859 68120751 3 3 132 0 1 1 1 0 0.8 0.32 3 0 0 NA NA NA 15 4 4 64.38 92.86 3.77 0 2 6 Whitelist BRCA-UK 0.87 0.57 0 0 0.84 0 No BRCA-UK CGP_donor_1472395 BRCA 0.5 3.23 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577507_G_T,CN:2 3 BRCA-UK DO52558 CGP_donor_1472395 female alive C50 chemotherapy complete response 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 1 16044097 244582817 1 13 278 5 3 0 1 4 0.09 1 20 0 0 20 6 10 23 6 10 56.98 85.27 14.72 0 3 4 Whitelist BRCA-UK 0.62 1 0 0 0.48 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 2 7684454 232784139 1 16 278 4 8 0 0 4 0 1 25 0 0 25 5 7 25 5 7 56.98 75.44 21.87 0 3 2 Whitelist BRCA-UK 0.41 1 0 0 0.08 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 28 0.05 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 3 11922432 87612537 2 5 278 2 2 0 0 1 0.26 0.41 9 0 0 9 4 6 20 4 7 56.98 42.83 57.04 0 2 4 Whitelist BRCA-UK 0.68 0.66 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 4 77745768 157268649 2 3 278 0 0 1 1 1 0.57 0.47 11 0 0 11 5 11 17 5 5 56.98 65.78 34.13 0 2 3 Whitelist BRCA-UK 0.87 0.71 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 5 31823357 125880711 1 7 278 2 2 1 0 2 0.53 0.17 11 0 0 11 4 5 15 4 6 56.98 55.87 43.99 0 2 1 Whitelist BRCA-UK 1 0.96 0.39 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 6 118851515 120068059 2 2 278 1 1 0 0 0 0.57 0.01 6 0 0 6 3 4 20 7 7 56.98 58.79 40.96 0 2 3 Whitelist BRCA-UK 0.68 0.04 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 7 70246018 97628499 3 3 278 0 3 0 0 0 0.03 0.01 10 0 0 10 3 7 36 4 7 56.98 52.65 47.12 0 4 3 Whitelist BRCA-UK 0.41 0.03 0 0 0.33 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 8 125852261 128738644 3 5 278 1 2 0 0 2 0.3 0.01 7 0 0 7 0 3 21 5 5 56.98 99.62 0.37 0 8 4 Whitelist BRCA-UK 0.62 0.06 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 9 14115986 130141817 1 6 278 4 0 0 0 2 0.01 0.64 6 0 0 6 5 6 10 5 5 56.98 99.72 0.18 0 3 2 Whitelist BRCA-UK 0.54 0.85 0 0 0.16 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 10 24748004 24901461 2 2 278 0 0 1 1 0 0.57 0.2 3 0 0 NA NA NA 9 5 7 56.98 0.4 99.28 0 2 1 Whitelist BRCA-UK 0.68 0.42 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 11 95253904 95503648 2 2 278 0 0 1 1 0 0.57 0.09 2 0 0 NA NA NA 13 3 7 56.98 64.24 35.33 0 2 4 Whitelist BRCA-UK 0.68 0.24 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 12 10989127 99543005 1 9 278 3 1 1 0 4 0.28 0.78 7 0 0 7 4 6 7 4 4 56.98 81.8 18.19 0 2 3 Whitelist BRCA-UK 0.62 0.93 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 13 27989786 101124343 1 6 278 2 2 0 1 1 0.53 0.62 9 0 0 9 4 6 12 5 7 56.98 37.28 62.72 0 2 3 Whitelist BRCA-UK 0.62 0.83 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 14 47319773 104041801 1 3 278 2 1 0 0 0 0.3 0.3 2 0 0 NA NA NA NA NA NA 56.98 31.89 67.2 0 1 2 Whitelist BRCA-UK 0.62 0.54 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 15 86006150 86070553 2 2 278 0 0 1 1 0 0.57 0.58 4 0 0 4 3 4 11 3 9 56.98 23.53 76.39 0 1 3 Whitelist BRCA-UK 0.68 0.8 0 0 0.64 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 16 12194427 48421992 1 2 278 2 0 0 0 0 0.11 0.35 3 0 0 NA NA NA 12 6 7 56.98 88.61 10.76 0 2 3 Whitelist BRCA-UK 0.54 0.6 0 0 0.48 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 17 280062 57920937 1 3 278 2 1 0 0 0 0.3 0.58 4 0 0 4 4 4 8 5 5 56.98 23.58 76.42 0 1 2 Whitelist BRCA-UK 0.62 0.8 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 18 2574904 57247508 1 5 278 0 3 1 0 1 0.11 0.71 7 0 0 7 6 7 12 6 10 56.98 44.16 55.83 0 2 3 Whitelist BRCA-UK 0.45 0.9 0 0 0.48 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 19 2509496 43332150 1 4 278 2 1 0 0 1 0.3 0.51 5 0 0 5 4 5 7 5 5 56.98 41.88 57.95 0 2 4 Whitelist BRCA-UK 0.68 0.75 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 20 8475832 52430202 1 8 278 3 3 0 0 2 0.11 0.21 10 0 0 10 4 5 10 4 5 56.98 35.92 63.12 0 2 4 Whitelist BRCA-UK 2 0.68 0.44 0 0 0.48 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 21 19200761 37179720 1 3 278 3 0 0 0 0 0.03 0.59 5 0 0 5 3 4 7 3 5 56.98 37.06 40.3 0 2 0 Whitelist BRCA-UK 0.41 0.81 0 0 0.33 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 22 18377691 50775577 1 5 278 3 2 0 0 0 0.14 0.39 7 0 0 7 0 3 9 4 4 56.98 87.83 0.03 0 3 4 Whitelist BRCA-UK 0.62 0.64 0 0 0.59 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1503143 X 7086901 7158137 2 2 278 2 0 0 0 0 0.11 0.05 1 0 0 NA NA NA 5 3 3 56.98 43.04 56.96 0 2 NA Whitelist BRCA-UK 0.54 0.17 0 0 0.48 0 No BRCA-UK CGP_donor_1503143 BRCA 0.76 2.68 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_A_C,CN:2 3 BRCA-UK DO52559 CGP_donor_1503143 female alive combined chemo+radiation therapy complete response 42 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 1 42291869 242712131 1 2 372 1 0 0 1 0 0.57 0 2 0.1 0 NA NA NA NA NA NA 59.71 99.68 0 0 3 53 Whitelist BRCA-UK 0.68 0 0.1 0 0.64 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 2 56978797 57016285 2 3 372 0 0 1 1 1 0.57 0.09 2 0 0 NA NA NA 13 13 13 59.71 99.58 0.31 0 2 3 Whitelist BRCA-UK 0.62 0.25 0 0 0.64 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 3 30716493 182760875 1 7 372 4 1 0 0 2 0.04 0 11 0 0 11 6 6 12 7 7 59.71 52.87 43.93 0 1 2 Whitelist BRCA-UK 0.41 0 0 0 0.36 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 4 13216178 189389975 2 8 372 0 2 0 0 6 0.11 0.12 25 0 0 25 7 8 26 8 8 59.71 78.76 21.13 0 3 4 Whitelist BRCA-UK 0.87 0.3 0 0 0.48 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 10 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 5 8536697 26007444 1 1 372 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 59.71 11.29 88.56 0 1 2 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 6 947294 169801583 171 190 372 49 42 40 40 19 0.73 0 224 0 0 224 14 19 225 14 19 59.71 59.84 40.01 3 2 4 Whitelist BRCA-UK 0.9 0 0 0 0.81 1 High confidence BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA With other complex events 361 0.49 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 7 11965500 41086991 1 2 372 2 0 0 0 0 0.11 0 4 0 0 4 3 4 5 3 5 59.71 99.74 0.04 0 4 2 Whitelist BRCA-UK 0.54 0 0 0 0.48 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 8 13447845 144298822 1 11 372 7 1 1 0 2 0 0.29 23 0 0 23 6 8 24 6 8 59.71 96.02 0.01 0 4 7 Whitelist BRCA-UK 0.17 0.53 0 0 0.11 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 20 0.03 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 9 4256540 29177994 12 12 372 3 3 3 3 0 1 0.11 22 0 0 22 4 7 28 5 7 59.71 99.56 0.27 0 3 1 Whitelist BRCA-UK 1 0.28 0 0 1 1 Low confidence BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA With other complex events 24 0.03 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 10 930780 17574149 3 3 372 0 1 1 1 0 0.8 0 4 0 0 4 3 4 12 6 6 59.71 30.03 66.53 2 6 4 Whitelist BRCA-UK 0.87 0.02 0 0 0.84 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 11 50688679 96052133 13 19 372 2 1 5 5 6 0.27 0.05 21 0 0 21 3 9 21 3 3 59.71 3.52 92.34 0 2 7 Whitelist BRCA-UK 4 0.62 0.16 0 0 0.59 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 32 0.04 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 12 17064462 27430583 25 42 372 8 7 7 3 17 0.5 0 24 0 0 24 4 4 28 5 5 59.71 4.51 95.41 0 2 49 Whitelist BRCA-UK 6 0.9 0 0 0 0.64 1 Low confidence BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA With other complex events 67 0.09 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 13 35735798 102440372 1 5 372 2 0 1 0 2 0.3 0.06 7 0 0 7 4 4 7 4 4 59.71 99.88 0 0 3 4 Whitelist BRCA-UK 0.62 0.19 0 0 0.59 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 8 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 14 NA NA 0 0 372 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.01 NA NA NA 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 15 26239138 48996279 1 2 372 2 0 0 0 0 0.11 0 6 NA 0 6 6 6 9 9 9 59.71 11.2 88.67 0 2 3 Whitelist BRCA-UK 0.54 0.02 NA 0 0.48 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 16 NA NA 0 0 372 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 10 6 9 0 0 0 0 0 0 Whitelist BRCA-UK NA 1 0 NA NA 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 17 78111563 78146905 1 1 372 1 0 0 0 0 0.39 0.15 1 0 NA NA NA NA 11 7 7 59.71 77.66 17.89 0 3 NA Whitelist BRCA-UK 0.62 0.34 0 NA 0.59 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 18 45358955 45378271 2 2 372 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 14 7 7 59.71 28.57 66.78 0 2 NA Whitelist BRCA-UK 0.68 1 0 0 0.64 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 19 5512025 20261729 3 3 372 0 1 1 1 0 0.8 0.13 3 0 0 NA NA NA NA NA NA 59.71 0.02 99.6 0 2 4 Whitelist BRCA-UK 0.87 0.32 0 0 0.84 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 20 57736678 57769253 1 2 372 1 0 1 0 0 0.57 0.37 1 0 0 NA NA NA NA NA NA 59.71 98.97 0.06 0 3 NA Whitelist BRCA-UK 0.68 0.62 0 0 0.64 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 21 NA NA 0 0 372 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 22 17368179 17429692 1 1 372 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 59.71 88.89 0 0 3 4 Whitelist BRCA-UK 0.62 0.34 NA NA 0.59 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 2 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1606179 X NA NA 0 0 372 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA NA NA NA NA 1 No BRCA-UK CGP_donor_1606179 BRCA 0.52 2.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-UK DO52560 CGP_donor_1606179 female alive C50.8 other therapy complete response 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 1 154387036 165898515 26 111 372 6 6 7 7 85 0.98 0 63 0 0 63 4 7 73 4 4 80.45 96.88 0.06 0 20 28 Whitelist BRCA-UK 21 0.68 0 0 0 0.99 1 Low confidence BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA With other complex events 137 0.18 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 2 9047201 63014731 1 2 372 1 1 0 0 0 0.57 0 2 0.01 0 NA NA NA 4 3 3 80.45 99.9 0 0 4 7 Whitelist BRCA-UK 0.68 0 0.01 0 0.64 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 3 59062733 186799036 1 2 372 0 2 0 0 0 0.11 0 4 0 0 4 3 4 5 3 5 80.45 99.49 0 0 4 6 Whitelist BRCA-UK 0.54 0 0 0 0.48 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 4 72088 55816167 1 5 372 1 2 0 1 1 0.57 0 12 0 0 12 4 6 12 4 6 80.45 99.79 0 0 5 7 Whitelist BRCA-UK 0.68 0.01 0 0 0.64 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 5 52625826 106613725 3 3 372 1 0 1 1 0 0.8 1 1 0 0 NA NA NA 29 13 13 80.45 26.52 70.77 6 2 NA Whitelist BRCA-UK 0.87 1 0 0 0.84 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 6 779867 1584032 1 1 372 0 0 1 0 0 0.39 0 3 NA NA NA NA NA 9 3 4 80.45 96.85 0 0 4 5 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 7 NA NA 0 0 372 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 0 NA NA 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 8 38681577 41303238 12 21 372 3 2 3 4 9 0.88 0.08 26 0 0 26 3 6 31 3 4 80.45 70.17 26.4 8 4 8 Whitelist BRCA-UK 0.89 0.22 0 0 0.91 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 33 0.04 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 9 90647653 91012491 1 1 372 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 3 80.45 75.55 24.3 0 4 6 Whitelist BRCA-UK 0.62 0.01 0 NA 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 10 52168169 80708134 5 7 372 2 0 1 2 2 0.53 0.71 8 0 0 8 3 4 13 3 4 80.45 65.12 34.66 4 5 7 Whitelist BRCA-UK 21 0.96 0.9 0 0 0.64 1 Linked to high confidence BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA With other complex events 12 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 11 81652440 123908136 3 7 372 1 1 1 3 1 0.57 0.71 6 0 0 6 5 6 17 11 11 80.45 99.63 0 1 4 3 Whitelist BRCA-UK 0.62 0.9 0 0 0.64 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 12 397435 2107683 3 59 372 0 1 2 0 56 0.3 0 23 0 0 23 3 4 36 4 4 80.45 99.98 0 5 23 24 Whitelist BRCA-UK 21 0.99 0 0 0 0.59 1 Linked to high confidence BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA With other complex events 62 0.08 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 13 NA NA 0 0 372 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.03 0 NA NA 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 14 53749971 53784990 1 1 372 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 80.45 2.83 81.25 0 0 2 Whitelist BRCA-UK 0.62 0 NA NA 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 15 NA NA 0 0 372 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0 NA NA NA 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 16 1818927 2156548 1 1 372 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 80.45 99.91 0 0 6 8 Whitelist BRCA-UK 0.62 0.01 NA NA 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 17 3744688 4206009 1 1 372 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 80.45 99.99 0 0 3 5 Whitelist BRCA-UK 0.62 0.01 NA NA 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 18 26857826 32981462 5 5 372 1 1 1 2 0 0.9 1 3 0 0 NA NA NA 5 3 3 80.45 99.96 0 0 4 6 Whitelist BRCA-UK 0.93 1 0 0 0.92 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 19 31876753 35712890 3 8 372 0 0 1 2 5 0.3 0 13 0 0 13 4 6 23 5 5 80.45 56.46 43.37 0 2 5 Whitelist BRCA-UK 0.62 0.02 0 0 0.59 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 20 NA NA 0 0 372 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.03 NA NA NA 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 21 10701912 45821258 55 147 372 15 13 18 9 92 0.38 0 112 0 0 112 7 7 112 7 7 80.45 34.21 36.19 1 7 12 Whitelist BRCA-UK 0.92 0 0 0 0.59 1 High confidence BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA With other complex events 202 0.27 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 22 49958422 50028556 2 3 372 0 1 0 1 1 0.57 0 3 0 0 NA NA NA 31 3 4 80.45 82.4 16.14 0 14 495 Whitelist BRCA-UK 0.62 0 0 0 0.64 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1654385 X 20168443 85204951 1 4 372 1 1 1 0 1 0.8 0 11 0 0 11 3 4 12 3 5 80.45 96.61 0 0 5 6 Whitelist BRCA-UK 0.68 0.01 0 0 0.84 1 No BRCA-UK CGP_donor_1654385 BRCA 0.72 4.42 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:3 4 BRCA-UK DO52561 CGP_donor_1654385 female other therapy 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 1 35101528 48512693 6 6 368 3 3 0 0 0 0.11 0.44 11 0 0 11 5 11 41 6 6 54.49 83.36 13.3 0 4 3 Whitelist BRCA-UK 0.54 0.69 0 0 0.48 1 Low confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 12 0.02 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 2 102310161 225180735 37 55 368 11 6 9 11 18 0.61 0 78 0 0 78 6 12 85 7 12 54.49 63.07 34.24 0 4 3 Whitelist BRCA-UK 1_10 0.97 0 0 0 0.69 1 Low confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 92 0.12 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 3 149211059 149287301 2 2 368 1 1 0 0 0 0.57 0.02 2 0 0 NA NA NA 13 3 6 54.49 50.22 49.66 0 4 5 Whitelist BRCA-UK 0.68 0.09 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 4 70530170 71513109 2 2 368 0 1 1 0 0 0.57 0 3 0 0 NA NA NA 6 0 3 54.49 25.56 71.8 0 2 3 Whitelist BRCA-UK 0.68 0 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 5 28386068 38607621 11 16 368 2 2 4 3 5 0.8 0.2 17 0 0 17 6 6 25 6 6 54.49 66.1 31.23 0 3 4 Whitelist BRCA-UK 0.95 0.42 0 0 0.84 1 Low confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 27 0.04 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 6 158623761 158637101 2 2 368 0 1 1 0 0 0.57 0.01 1 0 0 NA NA NA 7 7 7 54.49 99.86 0 0 3 NA Whitelist BRCA-UK 0.68 0.05 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 7 6667186 125829634 1 9 368 6 3 0 0 0 0.01 0.02 15 0 0 15 5 15 15 5 5 54.49 98.05 1.72 0 3 2 Whitelist BRCA-UK 0.28 0.08 0 0 0.21 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 18 0.02 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 8 80892483 86215416 2 2 368 0 1 1 0 0 0.57 0.34 4 0 0 4 0 4 19 5 6 54.49 96.58 0 0 4 3 Whitelist BRCA-UK 0.68 0.59 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 9 2482272 87525150 1 5 368 3 0 0 0 2 0.03 0.02 6 0 0 6 5 6 7 6 6 54.49 33.46 63.96 0 3 4 Whitelist BRCA-UK 0.62 0.08 0 0 0.33 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 8 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 10 290666 86528975 18 34 368 4 6 3 5 16 0.77 0 52 0 0 52 5 7 63 5 7 54.49 50.15 46.5 0 8 10 Whitelist BRCA-UK 2 0.97 0 0 0 0.84 1 Low confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 52 0.07 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 11 84794672 114100835 1 4 368 2 2 0 0 0 0.26 0 5 0 0 5 3 5 5 3 5 54.49 99.6 0.33 0 3 1 Whitelist BRCA-UK 0.62 0.02 0 0 0.59 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 8 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 12 52240971 107248205 20 21 368 2 6 6 6 1 0.49 0 22 0 0 22 8 12 43 8 13 54.49 51.22 44.99 0 2 3 Whitelist BRCA-UK 0.66 0 0 0 0.64 1 High confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 41 0.06 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 13 47794558 47827354 2 2 368 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 54.49 99.99 0.01 0 3 NA Whitelist BRCA-UK 0.68 0.04 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 14 32038817 105480337 1 5 368 4 1 0 0 0 0.04 0.1 12 0 0 12 4 12 13 5 5 54.49 3.15 95.94 0 2 1 Whitelist BRCA-UK 0.45 0.27 0 0 0.36 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 10 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 15 40624770 91501359 3 3 368 1 1 0 1 0 0.8 0.05 1 0 0 NA NA NA NA NA NA 54.49 0.75 99.15 0 2 NA Whitelist BRCA-UK 0.87 0.17 0 0 0.84 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 16 51788674 52382645 1 1 368 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA 6 3 3 54.49 21.35 74.11 0 2 NA Whitelist BRCA-UK 0.62 0.09 NA NA 0.59 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 2 0 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 17 424593 20104085 12 12 368 2 4 4 2 0 0.72 0.07 25 0 0 25 11 25 29 13 13 54.49 82.47 13.1 0 2 1 Whitelist BRCA-UK 0.83 0.21 0 0 0.8 1 High confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 24 0.03 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 18 67695480 69258623 3 3 368 0 1 1 1 0 0.8 0.26 5 0 0 5 3 5 10 4 5 54.49 35.74 64.23 0 4 2 Whitelist BRCA-UK 0.87 0.5 0 0 0.84 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 19 16148559 47684132 1 8 368 4 2 0 0 2 0.06 0.18 16 0 0 16 6 11 16 6 6 54.49 15.87 76.85 1 2 3 Whitelist BRCA-UK 0.41 0.4 0 0 0.48 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 14 0.02 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 20 51747623 53193453 7 8 368 1 0 5 1 1 0.04 0 18 0 0 18 3 5 24 3 5 54.49 13.99 85.04 0 8 16 Whitelist BRCA-UK 0.54 0 0 0 0.38 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 15 0.02 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 21 NA NA 0 0 368 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-UK NA 0.85 NA NA NA 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 0 0 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 22 41508739 50255621 2 2 368 0 1 0 1 0 0.57 0.63 2 0 0 NA NA NA NA NA NA 54.49 0.33 97.96 0 2 8 Whitelist BRCA-UK 0.68 0.84 0 0 0.64 1 No BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-UK::CGP_donor_1701345 X 47359209 62646302 14 19 368 7 5 2 0 5 0.04 0 33 0 0 33 4 8 53 4 8 54.49 24.83 71.8 0 2 1 Whitelist BRCA-UK 10_2 0.62 0 0 0 0.41 1 Low confidence BRCA-UK CGP_donor_1701345 BRCA 0.43 2.84 Breast-AdenoCA With other complex events 33 0.04 NA 3 BRCA-UK DO52562 CGP_donor_1701345 female alive C50.5 chemotherapy unknown 49 NA NA Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Breast-AdenoCA BRCA UK 0 NA BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 1 37390229 190370478 8 23 742 1 3 3 1 15 0.57 0.01 35 0 0 35 12 23 62 12 12 41.34 49.31 50.68 0 2 1 Whitelist BRCA-US 18_3 0.9 0.03 0 0 0.64 1 High confidence BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA With other complex events 31 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 2 46410064 66979496 3 12 742 1 2 0 0 9 0.3 0.02 9 0 0 9 3 5 49 6 10 41.34 26.68 73.21 0 3 2 Whitelist BRCA-US 1_X 0.68 0.07 0 0 0.59 1 Linked to high confidence BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA With other complex events 15 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 3 112462046 195019171 3 19 742 1 1 1 0 16 0.8 0.11 14 0 0 14 6 14 31 6 9 41.34 50.9 46.03 0 1 2 Whitelist BRCA-US 20_4 0.87 0.29 0 0 0.84 1 Linked to high confidence BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA With other complex events 22 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 4 109456663 169218724 2 4 742 0 0 2 2 0 0.26 1 11 0 0 11 5 11 25 11 12 41.34 59.69 40.2 0 1 2 Whitelist BRCA-US 0.62 1 0 0 0.59 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 8 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 5 5235976 159720787 1 19 742 3 4 0 2 10 0.27 0.06 21 0 0 21 9 16 23 9 9 41.34 91.96 5.37 0 1 2 Whitelist BRCA-US 6_8 0.62 0.18 0 0 0.59 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 28 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 6 1871034 168166718 1 57 742 4 11 1 1 40 0 0 47 0 0 47 11 25 48 11 15 41.34 35.16 64.7 0 3 2 Whitelist BRCA-US 10_18_3_5_7_9 0.54 0 0 0 0.07 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 74 0.05 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 7 12804785 147710050 1 30 742 1 6 1 0 22 0.01 0.01 44 0 0 44 9 17 51 9 10 41.34 41.01 58.76 0 3 2 Whitelist BRCA-US 10_11_12_20_6_9 0.68 0.05 0 0 0.21 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 38 0.03 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 8 58610813 141628750 1 22 742 3 5 0 0 14 0.03 0.18 12 0 0 12 6 8 21 6 8 41.34 27.99 71.85 0 2 3 Whitelist BRCA-US 10_16_4_5 0.68 0.4 0 0 0.33 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 30 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 9 1011854 128924973 1 22 742 3 7 0 0 12 0 0.57 27 0 0 27 8 23 30 8 8 41.34 41.35 58.48 0 3 2 Whitelist BRCA-US 11_7 0.22 0.79 0 0 0.14 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 32 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 10 53388358 118553566 3 6 742 0 1 1 1 3 0.8 0.48 14 0 0 14 6 14 26 6 6 41.34 68.08 31.75 0 2 1 Whitelist BRCA-US 7 0.93 0.73 0 0 0.84 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 9 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 11 8956771 130101571 1 22 742 0 9 0 0 13 0 0.79 24 0 0 24 15 15 24 15 20 41.34 30.47 69.1 0 2 3 Whitelist BRCA-US 13_15_20_7_9 0.08 0.95 0 0 0 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 31 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 12 8551694 125253036 1 24 742 3 13 1 1 6 0 0.66 31 0 0 31 13 31 31 13 13 41.34 38.4 60.85 1 2 3 Whitelist BRCA-US 7 0.02 0.87 0 0 0.01 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 42 0.03 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 13 26931051 109631661 1 11 742 0 4 0 0 7 0.01 0.42 10 0 0 10 7 10 12 9 12 41.34 61.83 38.17 0 1 2 Whitelist BRCA-US 11_4 0.49 0.67 0 0 0.16 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 15 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 14 56467043 77107381 2 4 742 0 0 1 1 2 0.57 0.92 7 0 0 7 5 7 19 11 11 41.34 7.97 91.11 0 2 1 Whitelist BRCA-US 1 1 1 0 0 0.64 1 Linked to high confidence BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA Canonical without polyploidization 6 0 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 15 59419044 77860747 1 6 742 0 4 0 0 2 0.01 0.02 6 0 0 6 6 6 13 10 10 41.34 73.45 26.46 0 2 3 Whitelist BRCA-US 11 0.54 0.1 0 0 0.16 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 10 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 16 30408080 80958009 1 5 742 0 4 0 0 1 0.01 0.91 7 0 0 7 7 7 11 9 9 41.34 10.68 89.28 0 2 3 Whitelist BRCA-US 0.45 1 0 0 0.16 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 9 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 17 7564505 56539923 1 9 742 2 7 0 0 0 0 0.73 23 0 0 23 9 14 27 9 10 41.34 39.95 54.22 0 2 1 Whitelist BRCA-US 0.12 0.91 0 0 0.08 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 18 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 18 3550118 39564908 1 19 742 1 6 1 0 11 0.01 0 21 0 0 21 5 5 26 5 7 41.34 39.63 54.89 0 3 2 Whitelist BRCA-US 1_6 0.62 0 0 0 0.21 1 Linked to high confidence BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA With other complex events 27 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 19 7540530 12815036 1 2 742 0 2 0 0 0 0.11 0 2 0 0 NA NA NA 17 3 5 41.34 41.96 50.64 0 2 3 Whitelist BRCA-US 0.54 0 0 0 0.48 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 4 0 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 20 11724482 45813711 1 18 742 1 4 0 0 13 0.04 0 13 0 0 13 6 8 15 6 9 41.34 13.49 85.55 0 2 3 Whitelist BRCA-US 3_7 0.62 0 0 0 0.36 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 23 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 21 18301501 38211721 1 5 742 0 5 0 0 0 0 0.06 12 0 0 12 12 12 13 13 13 41.34 6.7 70.65 0 2 3 Whitelist BRCA-US 0.1 0.19 0 0 0.07 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 10 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 22 24799162 50917237 1 12 742 2 4 0 0 6 0.06 0.01 12 0 0 12 4 7 16 5 7 41.34 12.39 86.86 0 2 1 Whitelist BRCA-US 5_6 0.54 0.03 0 0 0.48 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 18 0.01 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::05506f4c-e701-4a9d-ae06-97f066aade43 X 13529426 153637236 1 16 742 2 6 0 0 8 0.01 0.31 14 0 0 14 7 14 19 7 7 41.34 30.37 69.4 0 2 1 Whitelist BRCA-US 15_7 0.54 0.57 0 0 0.16 1 No BRCA-US 05506f4c-e701-4a9d-ae06-97f066aade43 BRCA 0.66 1.78 Breast-AdenoCA NA 24 0.02 NA 1 BRCA-US DO2783 TCGA-AN-A0AT 05506f4c-e701-4a9d-ae06-97f066aade43 female alive C50.9 62 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 1 104802401 247397708 1 3 257 2 1 0 0 0 0.3 0 4 0 0 4 4 4 5 5 5 23.36 1.39 98.61 0 1 2 Whitelist BRCA-US 0.62 0 0 0 0.59 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 6 0.01 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 2 190987208 191510474 1 1 257 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 23.36 0.22 99.68 0 1 2 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 3 36209435 190323857 36 43 257 10 7 10 9 7 0.88 0 37 0 0 37 37 37 38 38 38 23.36 64.14 32.72 0 1 2 Whitelist BRCA-US 18 0.96 0 0 0 0.91 1 High confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA Canonical without polyploidization 79 0.15 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 4 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 5 NA NA 0 0 257 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 6 NA NA 0 0 257 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 7 6161338 57778540 19 48 257 6 3 5 5 29 0.8 0 42 0 0 42 9 13 43 9 13 23.36 30.86 66.33 12 2 1 Whitelist BRCA-US 8 0.87 0 0 0 0.84 1 High confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA With other complex events 67 0.13 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 8 33053387 75087727 25 53 257 6 6 5 8 28 0.86 0 36 0 0 36 9 9 40 10 10 23.36 99.5 0.5 49 4 5 Whitelist BRCA-US 7 0.91 0 0 0 0.9 1 High confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA With other complex events 78 0.15 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 9 118103186 125102530 2 3 257 0 1 0 1 1 0.57 0.52 5 0 0 5 5 5 13 12 12 23.36 19.97 79.87 0 2 1 Whitelist BRCA-US 0.62 0.76 0 0 0.64 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 5 0.01 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 10 NA NA 0 0 257 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 11 29259457 41898334 1 1 257 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 23.36 30.88 68.56 0 1 2 Whitelist BRCA-US 0.62 0.01 NA NA 0.59 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 12 22079238 133021689 23 32 257 2 4 9 8 9 0.13 0 28 0 0 28 13 28 28 13 13 23.36 71.84 27.46 0 2 1 Whitelist BRCA-US 0.62 0 0 0 0.54 1 High confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA With other complex events 55 0.11 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 13 NA NA 0 0 257 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 14 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 15 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 16 NA NA 0 0 257 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA 8 0 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.68 0 NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 17 25508004 62998961 40 49 257 9 8 14 9 9 0.53 0 41 0 0 41 4 5 41 4 5 23.36 71.62 23.92 4 1 3 Whitelist BRCA-US 0.68 0 0 0 0.64 1 Low confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA With other complex events 89 0.17 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 18 11570704 36396526 3 9 257 0 1 1 1 6 0.8 0.24 6 0 0 6 6 6 8 8 8 23.36 16.15 83.82 0 1 2 Whitelist BRCA-US 3 0.85 0.48 0 0 0.84 1 Linked to high confidence BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA Canonical without polyploidization 12 0.02 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 19 NA NA 0 0 257 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 20 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 21 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a 22 NA NA 0 0 257 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::084c6aec-94f7-4090-8f3f-59fa9e89721a X NA NA 0 0 257 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 0 NA NA 1 No BRCA-US 084c6aec-94f7-4090-8f3f-59fa9e89721a BRCA 0.88 1.98 Breast-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 BRCA-US DO3958 TCGA-A2-A0D1 084c6aec-94f7-4090-8f3f-59fa9e89721a female alive C50.9 76 NA 786 NA Included Breast-AdenoCA BRCA US 0 25.86 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 1 1177876 186668388 1 8 151 1 1 0 0 6 0.57 1 9 0 0 9 5 6 11 5 6 54.43 65.35 34.65 0 6 2 Whitelist BRCA-US 12 0.87 1 0 0 0.64 0 Linked to low confidence BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA With other complex events 10 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 2 206583456 209302620 4 4 151 2 1 0 1 0 0.57 0.24 7 0 0 7 4 6 26 7 8 54.43 94.39 2.66 2 3 4 Whitelist BRCA-US 0.68 0.48 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 8 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 3 NA NA 0 0 151 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.13 0 NA NA 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 4 41377065 41512384 1 1 151 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 54.43 0.07 99.71 0 2 4 Whitelist BRCA-US 0.62 0.01 NA NA 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 5 136722827 140108497 1 2 151 2 0 0 0 0 0.11 0.18 3 0 0 NA NA NA 7 3 4 54.43 40.65 56.67 0 2 1 Whitelist BRCA-US 0.54 0.39 0 0 0.48 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 6 21506096 168262871 1 4 151 2 2 0 0 0 0.26 0.09 8 0 0 8 3 8 8 3 8 54.43 85.4 14.46 0 2 3 Whitelist BRCA-US 0.62 0.24 0 0 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 8 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 7 19206893 124229002 1 5 151 1 2 1 1 0 0.9 0.47 14 0 0 14 5 11 15 6 12 54.43 97.45 0 0 5 4 Whitelist BRCA-US 0.93 0.71 0 0 0.92 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 10 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 8 3871563 4425255 2 2 151 2 0 0 0 0 0.11 1 4 0.07 0 4 3 4 14 4 4 54.43 99.45 0.55 0 2 1 Whitelist BRCA-US 0.54 1 0.07 0 0.48 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 9 133580380 133661228 1 2 151 0 1 0 1 0 0.57 0.29 3 0 0 NA NA NA 8 4 6 54.43 44.13 52.76 0 1 2 Whitelist BRCA-US 0.68 0.54 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 10 5376350 130575397 1 4 151 1 2 1 0 0 0.57 1 7 0 0 7 3 4 7 3 4 54.43 82.7 13.57 0 3 8 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 8 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 11 55401990 57702467 2 5 151 0 1 1 0 3 0.57 0.44 4 0 0 4 4 4 9 7 9 54.43 99.57 0 0 3 4 Whitelist BRCA-US 2 0.68 0.68 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 12 3255392 12445504 37 42 151 11 9 8 9 5 0.92 0 56 0 0 56 6 9 58 7 7 54.43 24.73 71.3 5 6 4 Whitelist BRCA-US 1 1 0 0 0 0.94 0 Low confidence BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA With other complex events 79 0.26 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 13 50619687 50646860 1 1 151 0 0 0 1 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 54.43 56.05 29.8 0 4 NA Whitelist BRCA-US 0.62 0.21 NA NA 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 14 NA NA 0 0 151 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.85 NA NA NA 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 15 88163620 88185667 1 1 151 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 54.43 0 84.46 0 2 NA Whitelist BRCA-US 0.62 0.33 NA NA 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 16 3816937 54704681 1 1 151 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 54.43 0.71 99.19 0 1 2 Whitelist BRCA-US 0.62 0.42 NA NA 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 17 1014114 61222089 4 4 151 1 1 2 0 0 0.57 0 16 0 0 16 3 8 21 4 9 54.43 34.49 61.07 1 2 4 Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 8 0.03 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 18 NA NA 0 0 151 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 NA NA NA 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 19 9237253 9259604 1 1 151 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA 4 4 4 54.43 66.75 33.08 0 3 NA Whitelist BRCA-US 0.62 0.93 NA NA 0.59 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 20 NA NA 0 0 151 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 21 NA NA 0 0 151 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 22 44308328 49626981 1 2 151 0 0 1 1 0 0.57 0.27 2 0 0 NA NA NA 5 5 5 54.43 17.13 59.09 0 2 3 Whitelist BRCA-US 0.68 0.51 0 0 0.64 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::08da7c4c-3067-4bcf-9d7a-78566df72e69 X 27610077 52587569 1 3 151 1 0 1 1 0 0.8 0.26 2 0 0 NA NA NA 4 3 4 54.43 3.26 93.35 0 2 3 Whitelist BRCA-US 0.87 0.5 0 0 0.84 0 No BRCA-US 08da7c4c-3067-4bcf-9d7a-78566df72e69 BRCA 0.63 3.03 Breast-AdenoCA NA 6 0.02 frameshift_deletion,17_7577031_-_T,CN:2 2 BRCA-US DO3482 TCGA-B6-A0RE 08da7c4c-3067-4bcf-9d7a-78566df72e69 female alive C50.9 61 NA 6435 NA Included Breast-AdenoCA BRCA US 0 211.68 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 1 228804143 235377735 2 2 190 0 2 0 0 0 0.11 0.28 5 0 0 5 4 5 28 8 15 79.43 100 0 0 7 8 Whitelist BRCA-US 0.54 0.52 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 2 2290333 134740187 1 6 190 0 3 0 1 2 0.11 0.01 9 0 0 9 6 9 12 7 7 79.43 40.45 56.58 0 3 4 Whitelist BRCA-US 0.62 0.03 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 3 66886295 67218357 4 4 190 0 2 1 1 0 0.57 0.89 5 0 0 5 3 5 25 13 13 79.43 99.97 0 0 4 6 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 4 1842909 186389860 1 10 190 0 10 0 0 0 0 1 19 0 0 19 5 13 20 5 13 79.43 97.45 0 0 4 6 Whitelist BRCA-US 0 1 0 0 0 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 5 129575878 180014243 2 6 190 1 0 1 0 4 0.57 0.76 11 0 0 11 4 6 24 5 7 79.43 99.82 0.06 0 3 4 Whitelist BRCA-US 0.68 0.93 0 0 0.64 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 6 46081806 46359549 4 4 190 0 1 1 2 0 0.57 0.03 4 0 0 4 3 4 30 5 12 79.43 41.02 58.85 0 5 3 Whitelist BRCA-US 0.68 0.11 0 0 0.64 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 7 5595556 157499690 1 10 190 3 5 0 0 2 0.03 1 18 0 0 18 5 9 19 5 5 79.43 99.67 0.11 0 4 6 Whitelist BRCA-US 0.3 1 0 0 0.33 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 8 28068350 48961471 12 13 190 2 6 1 3 1 0.2 0 21 0 0 21 4 7 39 5 5 79.43 93.79 2.79 1 8 2 Whitelist BRCA-US 0.54 0 0 0 0.59 0 Low confidence BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA With other complex events 25 0.07 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 9 5756418 127456889 1 6 190 0 2 0 1 3 0.3 1 8 0 0 8 3 4 10 3 5 79.43 22.75 76.58 0 2 0 Whitelist BRCA-US 13 0.93 1 0 0 0.59 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 10 57005350 110116841 1 6 190 3 3 0 0 0 0.11 0.49 15 0 0 15 5 9 16 5 9 79.43 99.41 0.41 0 3 4 Whitelist BRCA-US 0.54 0.73 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 11 3566318 133756704 1 6 190 0 6 0 0 0 0 0.49 14 0 0 14 4 8 15 5 8 79.43 99.57 0 0 3 5 Whitelist BRCA-US 0.04 0.73 0 0 0.03 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 12 26270427 104952384 3 4 190 1 1 1 0 1 0.8 0.61 14 0 0 14 4 6 17 4 4 79.43 99.92 0 0 6 4 Whitelist BRCA-US 0.68 0.82 0 0 0.84 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 13 22649859 85475709 1 4 190 0 4 0 0 0 0.01 1 6 0 0 6 6 6 9 7 9 79.43 100 0 0 4 6 Whitelist BRCA-US 0.21 1 0 0 0.16 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 14 29089310 106407505 1 7 190 1 6 0 0 0 0 0.67 11 0 0 11 3 6 15 5 10 79.43 96.22 0.04 0 4 6 Whitelist BRCA-US 0.13 0.88 0 0 0.09 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 15 44409238 89630169 1 3 190 0 3 0 0 0 0.03 0.5 6 0 0 6 3 6 7 3 7 79.43 99.9 0 0 4 6 Whitelist BRCA-US 0.41 0.75 0 0 0.33 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 16 131551 85695079 1 7 190 2 3 0 0 2 0.14 0.18 10 0 0 10 4 8 10 4 8 79.43 39.88 60.03 0 2 4 Whitelist BRCA-US 0.77 0.39 0 0 0.59 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 17 21169554 78282255 1 7 190 1 3 0 0 3 0.11 0.37 13 0 0 13 4 5 14 4 4 79.43 64.44 30.03 1 3 4 Whitelist BRCA-US 0.62 0.62 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 18 47524237 48027255 2 2 190 0 2 0 0 0 0.11 0.11 3 0 0 NA NA NA 15 3 12 79.43 94.87 0 0 3 4 Whitelist BRCA-US 0.54 0.28 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 19 35025697 54705352 2 4 190 0 0 1 1 2 0.57 0.28 10 0 0 10 8 10 12 8 11 79.43 84.95 14.87 0 6 4 Whitelist BRCA-US 0.62 0.53 0 0 0.64 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 20 8797556 60575526 1 6 190 0 1 1 1 3 0.8 0.31 8 0 0 8 4 8 9 4 4 79.43 63.26 29.63 1 3 4 Whitelist BRCA-US 2 0.93 0.56 0 0 0.84 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 21 34800121 47309100 1 3 190 0 3 0 0 0 0.03 0.51 4 0 0 4 3 4 6 4 6 79.43 75.65 0 0 3 4 Whitelist BRCA-US 0.41 0.75 0 0 0.33 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 22 17560222 50753504 1 6 190 2 0 0 0 4 0.11 0.03 5 0 0 5 3 5 5 3 5 79.43 26.35 61.47 0 2 3 Whitelist BRCA-US 0.62 0.1 0 0 0.48 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0a2a3529-f645-4967-9a58-89ee20b8bb62 X 40272223 145616333 1 3 190 0 3 0 0 0 0.03 0.03 6 0 0 6 5 6 7 5 7 79.43 99.77 0 0 4 6 Whitelist BRCA-US 0.41 0.11 0 0 0.33 0 No BRCA-US 0a2a3529-f645-4967-9a58-89ee20b8bb62 BRCA 0.66 3.57 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 6 BRCA-US DO2629 TCGA-E2-A15E 0a2a3529-f645-4967-9a58-89ee20b8bb62 female alive C50.9 40 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 1 755344 72678036 50 85 487 18 7 14 11 35 0.16 0 43 0 0 43 5 7 50 5 7 17.75 70.14 26.89 0 1 2 Whitelist BRCA-US 14 0.62 0 0 0 0.59 1 Low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 135 0.14 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 2 53592888 134155482 1 3 487 0 0 1 0 2 0.39 0 1 NA 0 NA NA NA NA NA NA 17.75 0 99.9 0 2 NA Whitelist BRCA-US 0.62 0 NA 0 0.59 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 3 NA NA 0 0 487 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 4 NA NA 0 0 487 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 5 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 6 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 7 NA NA 0 0 487 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 8 22116077 140133049 22 37 487 7 3 6 6 15 0.65 0 21 0 0 21 4 5 32 8 8 17.75 27.73 72.26 11 1 3 Whitelist BRCA-US 1_14 0.87 0 0 0 0.73 1 Low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 59 0.06 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 9 NA NA 0 0 487 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 10 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 11 67403366 89463830 12 56 487 4 1 3 4 44 0.57 0 47 0 0 47 5 9 49 5 9 17.75 50.49 49.08 1 3 4 Whitelist BRCA-US 0.87 0 0 0 0.64 1 Low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 68 0.07 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 12 6603538 25009802 15 26 487 4 2 3 6 11 0.51 0.04 14 0 0 14 9 13 16 9 14 17.75 20.28 79.64 30 3 1 Whitelist BRCA-US 0.63 0.14 0 0 0.64 1 High confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA Canonical without polyploidization 41 0.04 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 13 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 14 39530849 45584134 4 30 487 2 1 1 0 26 0.57 0 12 0 0 12 5 12 14 5 14 17.75 34.01 62.28 0 3 1 Whitelist BRCA-US 1 0.66 0 0 0 0.64 1 Linked to low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 34 0.03 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 15 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 16 6943226 18119641 1 2 487 0 1 1 0 0 0.57 0 5 NA 0 5 3 5 7 4 4 17.75 9.64 90.27 1 2 3 Whitelist BRCA-US 0.68 0 NA 0 0.64 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 17 31395557 80441361 137 206 487 37 36 31 33 69 0.88 0 179 0 0 179 6 14 182 6 12 17.75 57.76 41.31 25 4 3 Whitelist BRCA-US 11_14 0.74 0 0 0 0.91 1 Low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 343 0.35 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 18 NA NA 0 0 487 0 0 0 0 0 NA 0.89 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 19 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 20 2672158 18490675 22 23 487 6 3 8 5 1 0.5 0 13 0 0 13 5 6 17 6 6 17.75 52.25 40.67 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.64 1 Low confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 45 0.05 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 21 NA NA 0 0 487 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 22 41987981 47918869 1 8 487 3 1 0 2 2 0.34 0.09 8 0 0 8 8 8 9 9 9 17.75 7.85 92.15 0 1 2 Whitelist BRCA-US 0.62 0.25 0 0 0.59 1 No BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA NA 14 0.01 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0bc5744c-5fa3-45bb-87d0-70a02068b392 X 15557457 38830595 31 32 487 4 5 10 12 1 0.12 0 40 0 0 40 8 18 52 8 18 17.75 45.48 54.29 9 2 3 Whitelist BRCA-US 0.54 0.01 0 0 0.53 1 High confidence BRCA-US 0bc5744c-5fa3-45bb-87d0-70a02068b392 BRCA 0.43 2.16 Breast-AdenoCA With other complex events 63 0.06 NA 2 BRCA-US DO1257 TCGA-BH-A0DG 0bc5744c-5fa3-45bb-87d0-70a02068b392 female alive C50.9 30 NA 713 NA Included Breast-AdenoCA BRCA US 0 23.45 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 1 867874 2285858 13 18 552 3 2 3 5 5 0.69 0 5 0 0 5 3 5 50 10 10 44.43 35.58 64.42 7 2 1 Whitelist BRCA-US 3 0.87 0.02 0 0 0.77 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 31 0.03 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 2 148693129 153533243 2 2 552 0 2 0 0 0 0.11 0.36 4 0 0 4 3 4 32 11 11 44.43 29.3 68.02 0 3 2 Whitelist BRCA-US 0.54 0.61 0 0 0.48 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 3 4014626 181407638 1 38 552 2 14 1 0 21 0 0 43 0 0 43 8 8 45 8 8 44.43 82.08 17.74 4 3 5 Whitelist BRCA-US 10_17 0.02 0.01 0 0 0 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 55 0.05 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 4 11282887 106840681 1 5 552 0 3 0 0 2 0.03 0 7 0 0 7 6 7 12 10 10 44.43 43.29 56.69 0 1 2 Whitelist BRCA-US 0.45 0 0 0 0.33 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 5 24520 120779185 70 81 552 17 12 19 22 11 0.39 0 97 0 0 97 6 15 100 9 15 44.43 90.02 7.31 23 3 5 Whitelist BRCA-US 10_6_X 0.81 0 0 0 0.59 1 Low confidence BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA With other complex events 151 0.14 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 6 53464511 167310326 2 15 552 2 0 2 2 9 0.57 0.13 15 0 0 15 15 15 20 19 19 44.43 14.3 85.45 0 2 3 Whitelist BRCA-US 8 0.85 0.32 0 0 0.64 1 Linked to low confidence BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA Canonical without polyploidization 21 0.02 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 7 86407856 94510980 2 2 552 1 0 1 0 0 0.57 0.71 3 0 0 NA NA NA 19 5 5 44.43 9.87 89.9 0 2 3 Whitelist BRCA-US 0.68 0.9 0 0 0.64 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 8 29495349 126511825 2 11 552 1 0 1 2 7 0.57 0.44 20 0 0 20 8 20 26 8 8 44.43 85.61 14.38 0 4 3 Whitelist BRCA-US 6 0.87 0.69 0 0 0.64 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 15 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 9 22106165 71517553 2 3 552 0 0 1 1 1 0.57 0.38 7 0 0 7 5 7 18 7 7 44.43 45.89 53.96 0 2 1 Whitelist BRCA-US 0.62 0.63 0 0 0.64 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 5 0 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 10 14391438 105152622 1 18 552 0 7 0 0 11 0 0.54 17 0 0 17 15 17 21 15 15 44.43 34.5 65.29 0 2 3 Whitelist BRCA-US 3_6 0.62 0.77 0 0 0.01 1 Linked to low confidence BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA Canonical without polyploidization 25 0.02 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 11 94603398 99698794 4 4 552 0 3 0 1 0 0.11 1 9 0 0 9 3 5 29 6 8 44.43 45.9 53.67 0 5 6 Whitelist BRCA-US 0.54 1 0 0 0.48 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 12 13277524 119364440 1 14 552 4 4 0 0 6 0.05 0.27 11 0 0 11 7 11 12 7 7 44.43 17.29 82.63 1 2 3 Whitelist BRCA-US 16_9 0.54 0.51 0 0 0.46 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 22 0.02 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 13 20332079 103772053 1 10 552 2 3 0 0 5 0.14 0.41 11 0 0 11 4 7 12 4 5 44.43 39.01 60.99 0 3 2 Whitelist BRCA-US 6 0.62 0.66 0 0 0.59 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 15 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 14 26311076 102907727 1 7 552 0 4 0 0 3 0.01 0.02 9 0 0 9 5 7 9 5 5 44.43 20.69 78.39 0 2 1 Whitelist BRCA-US 0.62 0.08 0 0 0.16 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 15 20301678 95945364 1 14 552 3 2 0 1 8 0.34 0.8 15 0 0 15 4 14 15 4 4 44.43 82.11 13.01 0 3 2 Whitelist BRCA-US 3 0.54 0.95 0 0 0.59 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 20 0.02 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 16 695403 88774415 1 12 552 0 3 0 1 8 0.11 0.69 10 0 0 10 7 10 10 7 7 44.43 3.15 92.09 1 2 3 Whitelist BRCA-US 12_X 0.41 0.89 0 0 0.48 1 Linked to high confidence BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA Canonical without polyploidization 16 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 17 17662500 59054235 1 8 552 3 2 0 0 3 0.14 0.79 9 0 0 9 5 9 10 5 10 44.43 99.21 0.77 0 2 3 Whitelist BRCA-US 0.68 0.94 0 0 0.59 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 13 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 18 48689219 55357304 2 4 552 0 0 1 1 2 0.57 0.51 8 0 0 8 6 8 23 20 20 44.43 61.2 33.99 0 3 2 Whitelist BRCA-US 22 0.62 0.75 0 0 0.64 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 19 5095422 6361196 2 2 552 0 2 0 0 0 0.11 0.45 4 0 0 4 3 4 11 6 6 44.43 13.32 79.41 0 3 2 Whitelist BRCA-US 0.54 0.69 0 0 0.48 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 20 1755666 43533962 1 6 552 1 2 0 1 2 0.57 0.66 6 0 0 6 4 5 11 4 4 44.43 83.5 9.38 0 1 4 Whitelist BRCA-US 4 0.62 0.87 0 0 0.64 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 10 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 21 34545904 45207893 1 6 552 1 4 0 0 1 0.04 0.56 8 0 0 8 8 8 11 11 11 44.43 0.4 77.28 0 2 3 Whitelist BRCA-US 0.54 0.78 0 0 0.36 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c 22 30225731 42768139 1 7 552 1 5 0 0 1 0.01 0.05 12 0 0 12 7 12 19 8 8 44.43 34.57 65.43 0 3 2 Whitelist BRCA-US 0.13 0.15 0 0 0.19 1 No BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA NA 13 0.01 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::0dca98b0-f43e-45b6-9a02-00092c78678c X 96927939 148453406 22 25 552 4 5 7 6 3 0.82 0 37 0 0 37 23 37 59 25 25 44.43 66.12 33.65 15 2 3 Whitelist BRCA-US 16 0.96 0.01 0 0 0.86 1 High confidence BRCA-US 0dca98b0-f43e-45b6-9a02-00092c78678c BRCA 0.76 2.13 Breast-AdenoCA Canonical without polyploidization 47 0.04 frameshift_deletion,17_7579360_-_GAAAC,CN:1 2 BRCA-US DO1249 TCGA-D8-A27H 0dca98b0-f43e-45b6-9a02-00092c78678c female alive C50.9 72 NA 19 NA Included Breast-AdenoCA BRCA US 0 0.62 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 1 105443708 174017574 1 4 357 2 0 0 1 1 0.3 0 10 0 0 10 4 6 16 4 6 66.66 95.86 1.17 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 7 0.01 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 2 101384536 110934429 2 2 357 0 1 1 0 0 0.57 0 3 0 0 NA NA NA 13 8 8 66.66 79.45 20.44 0 2 3 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 3 95813661 124485880 46 111 357 13 9 13 11 65 0.81 0 94 0 0 94 6 10 132 8 8 66.66 39.58 60.31 0 2 3 Whitelist BRCA-US 0.78 0 0 0 0.85 1 Low confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 157 0.22 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 4 NA NA 0 0 357 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 10 10 10 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 0 NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 5 178613257 179920594 1 1 357 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 3 66.66 99.88 0 0 3 4 Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 6 71335682 87123000 8 9 357 1 2 1 4 1 0.39 0.91 16 0 0 16 4 7 28 7 7 66.66 51.77 45.39 3 3 4 Whitelist BRCA-US 0.62 1 0 0 0.59 1 Low confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 17 0.02 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 7 133696295 133739003 1 1 357 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 5 5 66.66 0.39 97.06 0 1 2 Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 8 12544987 12591208 1 1 357 1 0 0 0 0 0.39 0 2 0.02 NA NA NA NA 6 4 4 66.66 96.44 0.14 0 2 3 Whitelist BRCA-US 0.62 0 0.02 NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 9 107320851 107333323 1 1 357 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 66.66 73.66 23.26 0 3 NA Whitelist BRCA-US 0.62 0.01 NA NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 10 NA NA 0 0 357 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 11 2655443 2688688 1 1 357 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 4 0 0 66.66 52.64 47.3 0 4 NA Whitelist BRCA-US 0.62 0.05 0 NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 12 588242 100462941 1 20 357 1 1 1 2 15 0.9 0.04 15 0 0 15 4 5 17 4 5 66.66 85.69 14.22 0 5 4 Whitelist BRCA-US 17 0.86 0.15 0 0 0.92 1 Linked to low confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 25 0.04 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 13 22046294 33670615 1 2 357 1 0 0 0 1 0.39 0.03 4 0 NA 4 4 4 7 6 6 66.66 17.96 79.26 0 2 3 Whitelist BRCA-US 0.68 0.11 0 NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 3 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 14 NA NA 0 0 357 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.2 0 NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 15 NA NA 0 0 357 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.09 NA NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 16 NA NA 0 0 357 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 17 35714118 65191896 21 71 357 5 7 4 5 50 0.82 0 81 0 0 81 6 9 106 6 12 66.66 58.99 36.58 5 2 6 Whitelist BRCA-US 3 0.62 0 0 0 0.87 1 Low confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 92 0.13 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 18 NA NA 0 0 357 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 19 27865671 58738381 1 15 357 3 3 2 0 7 0.39 0 26 0 0 26 6 12 27 6 12 66.66 51.95 38.57 0 2 4 Whitelist BRCA-US 17 0.73 0 0 0 0.59 1 Linked to low confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 23 0.03 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 20 2418957 62264410 16 54 357 5 5 2 4 38 0.68 0 51 0 0 51 10 12 52 10 14 66.66 81.75 10.87 0 4 2 Whitelist BRCA-US 3 0.87 0 0 0 0.76 1 High confidence BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA With other complex events 70 0.1 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 21 NA NA 0 0 357 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 22 34145627 34203166 1 1 357 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 66.66 0.11 99.89 0 1 2 Whitelist BRCA-US 0.62 0.34 NA NA 0.59 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1174f6e4-ffbe-4e59-a000-8d861c968369 X 26971118 147621514 1 3 357 1 0 1 0 1 0.57 0.55 10 0 0 10 3 7 10 3 4 66.66 96.79 0 0 4 3 Whitelist BRCA-US 0.87 0.77 0 0 0.64 1 No BRCA-US 1174f6e4-ffbe-4e59-a000-8d861c968369 BRCA 0.49 3.26 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-US DO3458 TCGA-AO-A03L 1174f6e4-ffbe-4e59-a000-8d861c968369 female alive C50.9 34 NA 2442 NA Included Breast-AdenoCA BRCA US 0 80.33 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 1 2176612 197481420 3 4 226 0 1 1 1 1 0.8 0.32 14 0 0 14 3 11 26 6 10 48.28 42.1 57.89 0 2 3 Whitelist BRCA-US 0.68 0.57 0 0 0.84 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 2 143372489 197279582 5 5 226 2 0 1 2 0 0.53 0.72 3 0 0 NA NA NA 11 7 7 48.28 30.75 69.15 1 2 1 Whitelist BRCA-US 0.68 0.9 0 0 0.64 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 10 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 3 7452286 89130665 2 6 226 0 2 1 1 2 0.57 0.12 6 0 0 6 3 4 15 8 8 48.28 33.68 66.2 0 2 1 Whitelist BRCA-US 0.62 0.3 0 0 0.64 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 10 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 4 39512243 153683333 1 8 226 3 2 0 0 3 0.14 0.5 14 0 0 14 12 14 16 13 13 48.28 57.32 42.67 0 1 2 Whitelist BRCA-US 0.62 0.75 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 5 6593404 159645517 1 11 226 2 0 1 0 8 0.3 0.89 5 0 0 5 3 5 6 3 3 48.28 73.21 24.13 0 1 2 Whitelist BRCA-US 8 0.74 1 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 14 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 6 14407620 165216840 1 4 226 1 0 1 0 2 0.57 0.67 8 0 0 8 3 8 11 3 3 48.28 27.19 72.58 0 2 3 Whitelist BRCA-US 0.54 0.88 0 0 0.64 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 7 127607934 128189738 1 1 226 0 1 0 0 0 0.39 0.24 2 0 0 NA NA NA 12 4 4 48.28 29.61 67.84 0 2 3 Whitelist BRCA-US 0.62 0.48 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 8 27526076 141170196 1 15 226 1 4 1 2 7 0.39 0.03 15 0 0 15 11 15 15 11 11 48.28 59.84 40.06 0 3 4 Whitelist BRCA-US 0.62 0.12 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 23 0.05 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 9 500497 133558707 1 4 226 1 1 0 0 2 0.57 1 3 0 0 NA NA NA 4 4 4 48.28 70.45 28.85 0 1 2 Whitelist BRCA-US 1 1 0 0 0.64 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 10 102762999 123901833 2 2 226 0 0 1 1 0 0.57 0.53 4 0 0 4 4 4 16 10 15 48.28 67.89 32 0 1 2 Whitelist BRCA-US 0.68 0.76 0 0 0.64 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 11 56544440 126872953 1 5 226 2 1 0 0 2 0.3 0.27 14 0 0 14 7 13 21 7 7 48.28 25.93 70.52 0 2 3 Whitelist BRCA-US 0.62 0.51 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 8 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 12 NA NA 0 0 226 0 0 0 0 0 NA 0.34 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist BRCA-US NA 0.59 0 NA NA 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 13 21114321 106849920 1 6 226 2 2 0 0 2 0.26 0.36 10 0 0 10 6 10 11 7 7 48.28 25.49 74.51 3 2 1 Whitelist BRCA-US 0.54 0.62 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 10 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 14 68707038 74428063 1 2 226 0 2 0 0 0 0.11 0.34 3 0 0 NA NA NA 6 6 6 48.28 71.74 27.35 0 2 1 Whitelist BRCA-US 0.54 0.59 0 0 0.48 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 15 44161553 81277143 1 3 226 2 0 0 0 1 0.11 0.42 6 0 0 6 3 6 7 3 3 48.28 43.9 55.97 0 2 1 Whitelist BRCA-US 0.62 0.67 0 0 0.48 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 5 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 16 NA NA 0 0 226 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.34 0 NA NA 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 17 53806276 62119298 1 2 226 0 2 0 0 0 0.11 0.54 3 0 0 NA NA NA 6 5 5 48.28 73.91 26.09 0 2 1 Whitelist BRCA-US 0.54 0.77 0 0 0.48 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 18 20866210 36450164 1 3 226 2 1 0 0 0 0.3 0.68 6 0 0 6 5 6 9 6 6 48.28 61.92 38.05 0 2 1 Whitelist BRCA-US 0.62 0.88 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 19 12756311 31218049 1 7 226 1 1 1 0 4 0.8 0 10 0 0 10 3 8 14 5 6 48.28 65.01 34.82 0 2 3 Whitelist BRCA-US X 0.77 0 0 0 0.84 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 10 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 20 31026274 57911766 1 6 226 1 2 0 0 3 0.3 0.03 8 0 0 8 4 8 11 5 5 48.28 53.26 45.75 0 2 1 Whitelist BRCA-US 0.62 0.12 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 9 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 21 16806407 38935908 1 4 226 2 1 0 0 1 0.3 0.21 7 0 0 7 5 7 8 5 5 48.28 20.97 56.38 0 2 3 Whitelist BRCA-US 0.62 0.43 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 22 29400131 38697826 1 5 226 1 2 0 0 2 0.3 0 6 0 0 6 3 6 10 5 5 48.28 49.71 50.29 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.59 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 8 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1549dc64-3dab-43fc-96e9-b07d520957e1 X 67411208 98036499 1 2 226 2 0 0 0 0 0.11 1 4 0 0 4 4 4 10 7 7 48.28 75.66 24.11 0 0 1 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US 1549dc64-3dab-43fc-96e9-b07d520957e1 BRCA 0.79 1.68 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 BRCA-US DO1274 TCGA-D8-A27F 1549dc64-3dab-43fc-96e9-b07d520957e1 female alive C50.9 40 NA 106 NA Included Breast-AdenoCA BRCA US 0 3.49 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 1 NA NA 0 0 435 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 2 89221689 142816631 1 2 435 2 0 0 0 0 0.11 0 4 0 0 4 4 4 8 5 5 80.01 99.89 0 0 3 4 Whitelist BRCA-US 0.54 0 0 0 0.48 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 4 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 3 42866139 165489103 1 4 435 1 1 0 0 2 0.57 0 7 0 0 7 6 7 8 6 6 80.01 76.08 20.86 2 4 5 Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 6 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 4 155589998 190789670 9 13 435 1 6 2 0 4 0.03 0.21 14 0 0 14 5 14 18 7 18 80.01 73.45 23.97 15 4 3 Whitelist BRCA-US 17 0.54 0.44 0 0 0.33 0 Low confidence BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA With other complex events 22 0.03 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 5 158651315 158701716 1 1 435 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 80.01 99.84 0 0 3 4 Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 2 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 6 85479294 87468572 1 1 435 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 80.01 96.01 1.16 3 2 3 Whitelist BRCA-US 0.62 0 NA NA 0.59 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 2 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 7 68767995 92676090 2 4 435 1 0 1 0 2 0.57 0 11 0 0 11 4 6 15 5 7 80.01 73.03 24.39 1 3 2 Whitelist BRCA-US 0.68 0.02 0 0 0.64 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 6 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 8 37839350 57247990 1 3 435 1 0 0 1 1 0.57 0 8 0 0 8 4 4 13 4 4 80.01 80.23 16.35 1 6 2 Whitelist BRCA-US 0.87 0.01 0 0 0.64 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 5 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 9 NA NA 0 0 435 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 10 17750424 51581302 1 3 435 1 0 0 1 1 0.57 0 2 0 0 NA NA NA NA NA NA 80.01 99.83 0 2 4 5 Whitelist BRCA-US 0.62 0 0 0 0.64 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 5 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 11 19167099 105816357 46 51 435 13 14 9 10 5 0.69 0 103 0 0 103 5 9 105 5 10 80.01 41.55 55.16 11 7 4 Whitelist BRCA-US 0.97 0 0 0 0.76 0 Low confidence BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA With other complex events 97 0.11 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 12 97454446 97466887 1 1 435 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 4 4 80.01 96.26 0 0 4 5 Whitelist BRCA-US 0.62 0 NA NA 0.59 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 2 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 13 49252644 68873475 6 7 435 2 1 2 1 1 0.88 0.36 9 0 0 9 6 9 12 7 7 80.01 60.5 39.5 0 3 4 Whitelist BRCA-US 0.77 0.61 0 0 0.91 0 Low confidence BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA After polyploidization 13 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 14 23971383 48794055 11 13 435 3 2 3 3 2 0.97 0.02 17 0 0 17 10 13 32 10 13 80.01 84.09 0 0 3 5 Whitelist BRCA-US 0.9 0.07 0 0 0.98 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 24 0.03 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 False positive; manually removed BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 15 NA NA 0 0 435 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 16 85060418 85434899 3 3 435 1 0 1 1 0 0.8 0.55 4 0 0 4 4 4 14 7 7 80.01 99.99 0 1 3 4 Whitelist BRCA-US 0.87 0.78 0 0 0.84 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 6 0.01 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 17 29145267 69232449 255 265 435 71 67 59 58 10 0.6 0 324 0 0 324 5 7 328 5 6 80.01 55.68 39.87 16 4 18 Whitelist BRCA-US 0.79 0 0 0 0.67 0 Low confidence BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA With other complex events 520 0.6 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 18 NA NA 0 0 435 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 19 NA NA 0 0 435 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 20 NA NA 0 0 435 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.04 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 21 NA NA 0 0 435 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 22 NA NA 0 0 435 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::1557183c-aedd-4df6-b98a-3654667f7b69 X 83128661 83165825 1 1 435 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 7 5 7 80.01 89.92 6.69 3 2 3 Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US 1557183c-aedd-4df6-b98a-3654667f7b69 BRCA 0.6 3.86 Breast-AdenoCA NA 2 0 NA 5 BRCA-US DO3188 TCGA-A8-A09I 1557183c-aedd-4df6-b98a-3654667f7b69 female alive C50.9 84 NA 1006 NA Included Breast-AdenoCA BRCA US 0 33.09 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 1 2158692 242947867 1 17 456 9 1 0 0 7 0 0.73 29 0 0 29 8 11 30 8 11 62.7 85.24 11.76 0 2 3 Whitelist BRCA-US 2_4 0 0.9 0 0 0.01 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 27 0.03 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 2 25587490 225396473 1 20 456 15 2 1 0 2 0 0.67 46 0 0 46 11 11 50 11 11 62.7 71.43 25.88 0 4 2 Whitelist BRCA-US 1 0 0.88 0 0 0 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 38 0.04 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 3 3791616 188605871 1 22 456 20 1 1 0 0 0 0.58 45 0 0 45 5 10 47 7 10 62.7 96.53 0.32 0 3 4 Whitelist BRCA-US 0 0.8 0 0 0 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 44 0.05 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 4 1872945 179290053 1 23 456 14 1 0 0 8 0 0.93 43 0 0 43 5 21 44 5 7 62.7 62.29 37.59 0 3 2 Whitelist BRCA-US 0 1 0 0 0 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 38 0.04 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 5 17076431 17161229 2 2 456 1 1 0 0 0 0.57 0.63 4 0 0 4 3 4 33 5 7 62.7 65.14 34.74 0 3 1 Whitelist BRCA-US 0.68 0.84 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 4 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 6 83058098 83127025 2 2 456 0 0 1 1 0 0.57 0.14 3 0 0 NA NA NA 39 6 18 62.7 88.23 8.85 0 2 4 Whitelist BRCA-US 0.68 0.33 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 4 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 7 10674468 156957618 1 12 456 11 0 0 1 0 0 0.41 22 0 0 22 3 8 24 4 9 62.7 96.03 3.74 0 3 4 Whitelist BRCA-US 0 0.65 0 0 0 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 24 0.03 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 8 116460660 116634721 3 3 456 3 0 0 0 0 0.03 0 8 0 0 8 3 5 68 6 10 62.7 76.68 22.95 1 3 1 Whitelist BRCA-US 0.41 0 0 0 0.33 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 6 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 9 5648604 96816555 1 14 456 8 0 0 1 5 0 0.4 15 0 0 15 5 8 18 5 9 62.7 68.5 30.8 0 3 2 Whitelist BRCA-US 19 0.49 0.65 0 0 0.02 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 23 0.03 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 10 6008487 99286612 1 16 456 8 0 1 1 6 0 0.65 23 0 0 23 4 6 29 4 8 62.7 88.84 7.83 0 3 2 Whitelist BRCA-US 0.21 0.86 0 0 0.05 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 26 0.03 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 11 64077552 69517171 2 3 456 1 1 0 0 1 0.57 0.37 5 0 0 5 3 5 33 5 7 62.7 8.71 87.09 0 2 4 Whitelist BRCA-US 0.62 0.63 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 5 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 12 22363601 104910756 1 9 456 6 0 2 0 1 0.01 0.07 20 0 0 20 7 10 20 7 10 62.7 54.49 45.5 0 2 4 Whitelist BRCA-US 0.41 0.22 0 0 0.16 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 17 0.02 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 13 27806529 105554622 1 6 456 4 0 1 0 1 0.04 0.8 11 0 0 11 7 9 16 7 7 62.7 78.15 7.08 0 1 2 Whitelist BRCA-US 0.25 0.95 0 0 0.36 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 11 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 14 NA NA 0 0 456 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 0 NA NA 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 15 80731811 80784536 1 1 456 1 0 0 0 0 0.39 0.47 1 0 NA NA NA NA 18 14 15 62.7 7.6 76.89 0 2 NA Whitelist BRCA-US 0.62 0.72 0 NA 0.59 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 2 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 16 84739687 87516187 2 4 456 0 0 1 1 2 0.57 0 5 0 0 5 3 4 27 5 7 62.7 78.04 16.51 0 4 1 Whitelist BRCA-US 1 1 0 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 6 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 17 1272788 47375704 1 4 456 3 0 0 0 1 0.03 0.08 11 0 0 11 3 4 13 3 5 62.7 23.05 76.93 0 2 1 Whitelist BRCA-US 0.54 0.23 0 0 0.33 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 7 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 18 6674904 48122977 1 10 456 5 1 0 0 4 0.01 0.25 13 0 0 13 8 9 22 8 12 62.7 94.91 0.44 0 3 4 Whitelist BRCA-US X 0.3 0.49 0 0 0.19 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 16 0.02 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 19 15391782 56817622 1 11 456 7 1 0 0 3 0 0 11 0 0 11 5 11 13 5 11 62.7 86.29 13.53 0 4 2 Whitelist BRCA-US 0.13 0 0 0 0.04 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 19 0.02 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 20 19293418 25404560 2 2 456 0 0 1 1 0 0.57 0.05 3 0 0 NA NA NA 15 4 5 62.7 82.12 10.52 0 2 3 Whitelist BRCA-US 0.68 0.17 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 4 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 21 38701101 38723235 2 2 456 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 11 6 6 62.7 27.9 42.39 0 2 4 Whitelist BRCA-US 0.68 0.07 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 4 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 22 29000894 29357719 1 1 456 1 0 0 0 0 0.39 0.67 2 0 NA NA NA NA 7 6 7 62.7 70.93 29.07 0 2 3 Whitelist BRCA-US 0.62 0.87 0 NA 0.59 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 2 0 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::174850b4-5ec2-462b-a890-89bd1716b3c2 X 49723123 53665792 2 4 456 1 0 1 0 2 0.57 0.28 6 0 0 6 6 6 25 8 11 62.7 13.56 83.06 0 2 3 Whitelist BRCA-US 18 0.68 0.53 0 0 0.64 0 No BRCA-US 174850b4-5ec2-462b-a890-89bd1716b3c2 BRCA 0.47 3.02 Breast-AdenoCA NA 6 0.01 stopgain,17_7574003_A_G,CN:2 4 BRCA-US DO44273 TCGA-A2-A3Y0 174850b4-5ec2-462b-a890-89bd1716b3c2 female alive C50.9 57 NA 859 NA Included Breast-AdenoCA BRCA US 0 28.26 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 1 NA NA 0 0 44 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.08 0 NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 2 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 3 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 4 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 5 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 6 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 8 2456699 67762073 11 15 44 2 2 2 5 4 0.48 0 24 0 0 24 12 22 25 12 22 12.69 29.61 66.96 0 1 2 Whitelist BRCA-US 0.62 0 0 0 0.64 1 High confidence BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA With other complex events 26 0.3 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 9 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 11 55159846 80364291 13 15 44 8 3 1 1 2 0.02 0 26 0 0 26 3 6 28 3 6 12.69 56.08 40.42 0 4 8 Whitelist BRCA-US 0.54 0 0 0 0.32 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 28 0.32 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 12 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 16 NA NA 0 0 44 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.29 NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 18 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::17c1d42c-cb84-4655-a4cd-b54bae17ecaf X 69312066 79936375 1 1 44 0 0 1 0 0 0.39 0.73 5 NA NA 5 5 5 6 6 6 12.69 54.1 45.68 0 1 2 Whitelist BRCA-US 0.62 0.9 NA NA 0.59 1 No BRCA-US 17c1d42c-cb84-4655-a4cd-b54bae17ecaf BRCA 0.93 2 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3352 TCGA-E2-A15K 17c1d42c-cb84-4655-a4cd-b54bae17ecaf female alive C50.9 58 NA 34 NA Included Breast-AdenoCA BRCA US 0 1.12 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 1 38685599 189677058 2 7 280 1 2 0 1 3 0.57 0 33 0 0 33 5 7 60 5 9 51.78 81.9 18.1 1 4 3 Whitelist BRCA-US 0.77 0 0 0 0.64 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 2 86679973 237166973 2 5 280 0 0 2 2 1 0.26 0.16 24 0 0 24 4 7 38 5 9 51.78 78.63 18.6 0 3 4 Whitelist BRCA-US 0.68 0.37 0 0 0.59 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 3 89155376 183989183 1 4 280 1 3 0 0 0 0.11 0.35 15 0 0 15 9 13 18 9 13 51.78 65.75 31.09 0 4 5 Whitelist BRCA-US 0.54 0.6 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 4 89059768 169835748 1 5 280 0 5 0 0 0 0 0.02 8 0 0 8 3 6 11 3 5 51.78 0.29 99.5 0 2 4 Whitelist BRCA-US 0.1 0.07 0 0 0.07 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 5 86666487 138741973 4 4 280 1 1 1 1 0 1 0.03 9 0 0 9 7 9 26 8 9 51.78 67.12 32.73 2 2 1 Whitelist BRCA-US 1 0.1 0 0 1 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 6 1006535 165186446 1 7 280 0 5 0 0 2 0 0.8 23 0 0 23 7 10 25 7 7 51.78 80.35 16.48 0 3 4 Whitelist BRCA-US 0.13 0.95 0 0 0.07 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 7 30506994 126944964 1 5 280 0 5 0 0 0 0 0.14 5 0 0 5 3 4 5 3 3 51.78 77.41 20.04 4 3 2 Whitelist BRCA-US 0.1 0.34 0 0 0.07 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 8 91875888 145769969 1 4 280 0 3 0 0 1 0.03 0.28 14 0 0 14 4 9 20 5 9 51.78 92.2 3.85 0 5 6 Whitelist BRCA-US 0.54 0.52 0 0 0.33 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 9 97213776 119808143 1 2 280 0 2 0 0 0 0.11 0.65 7 0 0 7 4 4 10 4 5 51.78 4.21 95.09 0 2 3 Whitelist BRCA-US 0.54 0.86 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 10 7097845 127075875 1 13 280 0 9 1 0 3 0 0.15 18 0 0 18 4 10 22 4 10 51.78 27.16 72.66 0 2 3 Whitelist BRCA-US 0.15 0.35 0 0 0.01 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 11 65200077 65288777 2 2 280 0 2 0 0 0 0.11 0.78 1 0 0 NA NA NA 14 5 8 51.78 61.56 34.98 0 3 NA Whitelist BRCA-US 0.54 0.93 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 12 107647981 119423897 1 2 280 0 2 0 0 0 0.11 0.2 3 0 0 NA NA NA 12 5 7 51.78 65.37 30.89 0 4 3 Whitelist BRCA-US 0.54 0.42 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 13 23608265 101075339 1 4 280 0 4 0 0 0 0.01 0.74 7 0 0 7 5 5 8 6 6 51.78 5.43 94.57 0 2 3 Whitelist BRCA-US 0.21 0.91 0 0 0.16 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 14 21828795 102275183 1 3 280 0 3 0 0 0 0.03 0.12 5 0 0 5 3 5 6 3 3 51.78 0.03 97.18 0 2 3 Whitelist BRCA-US 0.41 0.31 0 0 0.33 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 15 90588944 90602624 1 1 280 0 1 0 0 0 0.39 0.1 2 0 NA NA NA NA 9 3 7 51.78 17.37 77.85 0 2 4 Whitelist BRCA-US 0.62 0.26 0 NA 0.59 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 16 23739942 23780336 1 1 280 0 1 0 0 0 0.39 0.19 1 0 NA NA NA NA 10 6 6 51.78 71.56 28.34 0 4 NA Whitelist BRCA-US 0.62 0.41 0 NA 0.59 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 17 5818162 79357579 1 7 280 0 7 0 0 0 0 0.2 14 0 0 14 5 7 16 5 6 51.78 57.74 37.81 0 3 2 Whitelist BRCA-US 0.02 0.42 0 0 0.01 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 18 45680851 45736097 1 1 280 0 1 0 0 0 0.39 0.46 2 0 NA NA NA NA 6 3 3 51.78 78.61 16.75 0 3 6 Whitelist BRCA-US 0.62 0.7 0 NA 0.59 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 19 7532430 8051196 1 2 280 0 2 0 0 0 0.11 0.83 1 0 0 NA NA NA 6 0 3 51.78 64.6 27.64 0 2 NA Whitelist BRCA-US 0.54 0.97 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 20 3348715 39058099 1 2 280 0 2 0 0 0 0.11 0.3 4 NA 0.04 4 3 4 8 4 5 51.78 92.9 0 0 3 4 Whitelist BRCA-US 0.54 0.55 NA 0.04 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 21 17878284 32893984 1 2 280 0 2 0 0 0 0.11 0.59 4 0 0 4 4 4 8 4 4 51.78 25.9 51.46 0 2 3 Whitelist BRCA-US 0.54 0.81 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 22 20072262 47418944 1 3 280 0 3 0 0 0 0.03 0.15 1 0 0 NA NA NA NA NA NA 51.78 0 100 0 2 NA Whitelist BRCA-US 0.41 0.36 0 0 0.33 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::18eb4dfc-556f-4bf3-a411-4780209ed1e0 X 1507340 104229749 1 5 280 1 3 0 0 1 0.11 0.49 10 0 0 10 3 6 13 3 6 51.78 39.68 56.93 0 2 1 Whitelist BRCA-US 0.45 0.74 0 0 0.48 0 No BRCA-US 18eb4dfc-556f-4bf3-a411-4780209ed1e0 BRCA 0.42 2.75 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:2 3 BRCA-US DO1301 TCGA-BH-A0B3 18eb4dfc-556f-4bf3-a411-4780209ed1e0 female alive C50.9 53 NA 1203 NA Included Breast-AdenoCA BRCA US 0 39.57 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 1 NA NA 0 0 31 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.75 NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 2 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 3 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 4 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 5 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 6 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 7 44622256 75544598 2 2 31 0 0 1 1 0 0.57 0.68 1 NA 0 NA NA NA NA NA NA 52.17 0 99.77 0 2 NA Whitelist BRCA-US 0.68 0.88 NA 0 0.64 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 4 0.06 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 8 36229799 65818630 1 11 31 1 3 0 0 7 0.11 0 15 0 0 15 7 10 17 8 11 52.17 71.44 24.75 0 6 7 Whitelist BRCA-US 0.34 0 0 0 0.48 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 15 0.24 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 9 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 10 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 11 56044654 71036706 7 14 31 1 5 0 1 7 0.04 0 21 0 0 21 0 4 25 3 4 52.17 43.17 53.11 0 4 3 Whitelist BRCA-US 8 0.21 0 0 0 0.38 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 21 0.34 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 13 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 14 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 15 NA NA 0 0 31 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.8 NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 17 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 18 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 19 NA NA 0 0 31 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.7 NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 20 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 22 NA NA 0 0 31 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.56 NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1b703058-e596-45bc-80fe-8b98d545c2e2 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 1b703058-e596-45bc-80fe-8b98d545c2e2 BRCA 0.78 2.99 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO1281 TCGA-AR-A2LK 1b703058-e596-45bc-80fe-8b98d545c2e2 female alive C50.9 62 NA 1304 NA Included Breast-LobularCA BRCA US 0 42.89 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 1 214161940 231274267 71 74 256 18 20 16 17 3 0.92 0 62 0 0 62 11 13 84 11 13 82.64 95.93 4.06 10 3 4 Whitelist BRCA-US 0.89 0 0 0 0.94 1 High confidence BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA With other complex events 145 0.28 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 2 11769340 11839253 3 3 256 1 1 1 0 0 0.8 0.91 2 0 0 NA NA NA 28 5 6 82.64 99.02 0.89 0 6 9 Whitelist BRCA-US 0.87 1 0 0 0.84 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 6 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 3 13449804 191880997 1 6 256 3 3 0 0 0 0.11 0 6 0 0 6 3 6 7 3 3 82.64 99.48 0.49 0 4 2 Whitelist BRCA-US 0.54 0.01 0 0 0.48 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 12 0.02 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 4 78939920 92008293 1 2 256 1 1 0 0 0 0.57 0 4 NA 0 4 3 4 5 3 3 82.64 99.89 0.09 0 4 2 Whitelist BRCA-US 0.68 0 NA 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 5 58040949 58742028 1 1 256 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 6 4 6 82.64 93.26 4.06 0 3 5 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 2 0 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 6 124419945 169580563 8 8 256 2 2 2 2 0 1 0.89 14 0 0 14 9 14 17 9 9 82.64 99.25 0.51 0 4 6 Whitelist BRCA-US 1 1 0 0 1 1 High confidence BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA Before polyploidization 16 0.03 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 7 104732078 104981847 2 2 256 2 0 0 0 0 0.11 0.07 1 0 0 NA NA NA NA NA NA 82.64 99.78 0 0 4 NA Whitelist BRCA-US 0.54 0.21 0 0 0.48 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 8 121349746 145269137 11 13 256 3 4 3 1 2 0.63 0 15 0 0 15 0 3 40 3 5 82.64 73.7 22.73 0 7 16 Whitelist BRCA-US 0.9 0 0 0 0.71 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 24 0.05 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 9 NA NA 0 0 256 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 NA NA NA 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 0 0 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 10 1292591 123470829 1 17 256 4 3 0 1 9 0.17 0.07 26 0 0 26 4 5 27 4 4 82.64 96.47 0 0 3 6 Whitelist BRCA-US 6 0.87 0.21 0 0 0.59 1 Linked to high confidence BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA With other complex events 25 0.05 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 11 15839287 131242333 1 2 256 1 1 0 0 0 0.57 0 6 NA 0 6 3 5 6 3 5 82.64 58.33 37.83 0 6 2 Whitelist BRCA-US 0.68 0.01 NA 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 12 77456320 77754400 1 2 256 1 0 0 0 1 0.39 0.18 1 0 NA NA NA NA 4 4 4 82.64 99.92 0 0 4 NA Whitelist BRCA-US 0.68 0.4 0 NA 0.59 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 3 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 13 73778654 74192187 2 2 256 1 1 0 0 0 0.57 0.23 1 0 0 NA NA NA NA NA NA 82.64 0.52 85.33 0 3 NA Whitelist BRCA-US 0.68 0.46 0 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 14 22888665 106023075 1 2 256 1 1 0 0 0 0.57 0.03 3 NA 0 NA NA NA NA NA NA 82.64 81.29 0 0 4 3 Whitelist BRCA-US 0.68 0.11 NA 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 15 40959844 64492842 1 2 256 0 2 0 0 0 0.11 0.85 4 0 0 4 4 4 5 5 5 82.64 84.59 0 0 3 5 Whitelist BRCA-US 0.54 0.98 0 0 0.48 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 16 NA NA 0 0 256 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.07 NA NA NA 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 0 0 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 17 39627535 40030445 2 2 256 0 2 0 0 0 0.11 1 2 0 0 NA NA NA 5 3 3 82.64 100 0 0 4 5 Whitelist BRCA-US 0.54 1 0 0 0.48 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 18 NA NA 0 0 256 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 0 0 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 19 4418891 10294637 2 2 256 0 0 1 1 0 0.57 1 4 0 0 4 3 4 7 3 5 82.64 98.82 0.47 0 4 6 Whitelist BRCA-US 0.68 1 0 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 20 14150635 30712638 1 4 256 2 2 0 0 0 0.26 0.28 6 0 0 6 6 6 6 6 6 82.64 99.01 0 0 4 5 Whitelist BRCA-US 0.62 0.52 0 0 0.59 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 8 0.02 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 21 17177160 27018496 4 4 256 2 0 2 0 0 0.26 0.25 10 0 0 10 3 5 13 3 4 82.64 77.35 0 7 6 9 Whitelist BRCA-US 0.62 0.49 0 0 0.59 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 8 0.02 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 22 21154519 21237564 1 1 256 0 0 0 1 0 0.39 0.77 2 NA NA NA NA NA 6 3 3 82.64 73.57 2.65 0 3 4 Whitelist BRCA-US 0.62 0.93 NA NA 0.59 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 2 0 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::1d27253f-b036-44e7-a04d-8da5bbf57419 X 82903861 155167900 2 2 256 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 5 3 3 82.64 12.99 86.95 0 2 4 Whitelist BRCA-US 0.68 0.15 0 0 0.64 1 No BRCA-US 1d27253f-b036-44e7-a04d-8da5bbf57419 BRCA 0.72 4.37 Breast-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_G_-,CN:4 4 BRCA-US DO2719 TCGA-E2-A1LK 1d27253f-b036-44e7-a04d-8da5bbf57419 female deceased C50.9 84 266 NA NA Included Breast-AdenoCA BRCA US 1 8.75 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 1 27041355 199939627 1 3 61 0 1 2 0 0 0.3 0.33 8 0 0 8 0 4 10 3 4 53.1 99.86 0.14 0 3 2 Whitelist BRCA-US 0.62 0.59 0 0 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 2 43029528 141917844 1 2 61 1 1 0 0 0 0.57 0.49 5 NA 0 5 3 5 7 3 4 53.1 37.31 59.98 0 2 1 Whitelist BRCA-US 0.68 0.73 NA 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 3 105027716 132104062 2 2 61 0 1 1 0 0 0.57 0.01 6 0 0 6 5 6 14 5 5 53.1 50.59 46.33 0 3 4 Whitelist BRCA-US 0.68 0.04 0 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 4 91844857 91864952 1 1 61 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 53.1 0 99.81 0 2 NA Whitelist BRCA-US 0.62 0.69 NA NA 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 5 NA NA 0 0 61 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 6 NA NA 0 0 61 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.51 NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 7 69698908 112140807 1 4 61 2 2 0 0 0 0.26 0.14 3 0 0 NA NA NA 5 3 3 53.1 99.78 0 0 4 3 Whitelist BRCA-US 0.62 0.34 0 0 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 8 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 8 19951325 145691960 1 2 61 0 1 1 0 0 0.57 1 4 0 0 4 3 4 5 4 4 53.1 99.43 0 0 4 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 9 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 10 5244231 9709446 1 1 61 0 1 0 0 0 0.39 0.36 4 0 NA 4 4 4 8 8 8 53.1 96.65 0 0 3 4 Whitelist BRCA-US 0.62 0.62 0 NA 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 11 91670227 93728885 2 5 61 0 0 1 1 3 0.57 0 7 0 0 7 0 4 21 3 4 53.1 83.89 15.68 1 5 7 Whitelist BRCA-US 3 0.62 0 0 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 12 40387951 99523214 1 2 61 1 0 1 0 0 0.57 0.76 7 0 0 7 4 6 11 4 4 53.1 28 68.26 1 2 4 Whitelist BRCA-US 0.68 0.93 0 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 13 113299080 113309167 1 1 61 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 53.1 25.24 74.76 0 4 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 14 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 16 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 17 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 18 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 19 37541438 37730853 1 1 61 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA 7 5 5 53.1 47.73 45 0 3 4 Whitelist BRCA-US 0.62 0.3 NA NA 0.59 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 20 10838298 45973928 4 4 61 0 1 2 1 0 0.57 0.04 5 0 0 5 4 5 6 4 6 53.1 98.91 0 0 4 5 Whitelist BRCA-US 0.68 0.15 0 0 0.64 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 8 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::20e8106b-1290-4735-abe4-7621e08e3dc8 X 19920456 20139221 1 2 61 2 0 0 0 0 0.11 1 4 0.15 0 4 3 4 5 3 5 53.1 99.76 0.01 0 4 2 Whitelist BRCA-US 0.54 1 0.15 0 0.48 0 No BRCA-US 20e8106b-1290-4735-abe4-7621e08e3dc8 BRCA 0.58 3 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 BRCA-US DO1384 TCGA-BH-A0E0 20e8106b-1290-4735-abe4-7621e08e3dc8 female alive C50.9 38 NA 134 NA Included Breast-AdenoCA BRCA US 0 4.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 1 1652876 1916021 2 2 618 1 0 0 1 0 0.57 0 3 0 0 NA NA NA 14 4 7 90.2 97.02 0 0 4 5 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 2 181721293 233322094 5 7 618 2 1 1 1 2 0.9 0 10 0 0 10 5 10 24 7 11 90.2 97.34 0.06 3 5 3 Whitelist BRCA-US 0.96 0 0 0 0.92 1 Linked to high confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 12 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 3 49458810 79003885 51 55 618 13 10 17 11 4 0.52 0 48 0 0 48 7 13 71 7 13 90.2 99.88 0 20 9 8 Whitelist BRCA-US 0.82 0 0 0 0.64 1 High confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 106 0.09 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 4 103236038 155236188 3 6 618 1 1 1 3 0 0.57 0.01 13 0 0 13 12 13 33 16 16 90.2 99.91 0.06 1 3 4 Whitelist BRCA-US 0.68 0.03 0 0 0.64 1 Linked to high confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA After polyploidization 12 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 5 3996695 20509407 5 6 618 2 2 1 0 1 0.53 0 10 0 0 10 3 6 25 5 5 90.2 97.34 0 0 6 9 Whitelist BRCA-US 0.62 0 0 0 0.64 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 6 12923765 104967173 40 44 618 10 11 10 9 4 0.98 0.02 62 0 0 62 7 12 68 7 12 90.2 99.76 0 4 7 3 Whitelist BRCA-US 4 0.99 0.09 0 0 0.99 1 High confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 84 0.07 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 7 52434693 145134157 7 35 618 1 2 1 3 28 0.67 0 31 0 0 31 4 5 54 10 12 90.2 99.78 0 1 15 8 Whitelist BRCA-US 8_X 0.75 0 0 0 0.74 1 Low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 42 0.03 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 8 63956033 143798717 63 108 618 15 20 12 16 45 0.56 0 150 0 0 150 5 13 224 6 13 90.2 96.58 0 12 10 9 Whitelist BRCA-US 17_X 0.71 0 0 0 0.64 1 Low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 171 0.14 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 9 30724383 136978634 16 21 618 5 3 4 4 5 0.92 0.02 34 0 0 34 4 8 43 5 8 90.2 84.42 12.5 6 6 5 Whitelist BRCA-US 0.95 0.09 0 0 0.94 1 Low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 37 0.03 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 10 68736349 103136101 3 5 618 0 2 1 0 2 0.3 0 6 0 0 6 6 6 20 7 7 90.2 96.4 0 3 5 6 Whitelist BRCA-US 0.62 0.01 0 0 0.59 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 11 24382479 33417199 2 5 618 1 0 1 0 3 0.57 0 6 0 0 6 4 4 13 5 5 90.2 94.89 1.21 0 5 9 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 7 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 12 NA NA 0 0 618 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 13 NA NA 0 0 618 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 14 47113734 83605831 1 1 618 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 90.2 99.09 0 0 3 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 15 NA NA 0 0 618 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 16 5545432 6433605 3 3 618 1 1 1 0 0 0.8 0.62 3 0 0 NA NA NA 16 6 6 90.2 86.55 8.69 0 6 7 Whitelist BRCA-US 0.87 0.83 0 0 0.84 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 6 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 17 29900854 72983271 24 59 618 7 9 3 5 35 0.34 0 77 0 0 77 12 18 105 12 12 90.2 92.79 2 3 6 7 Whitelist BRCA-US 2_4_8_X 0.93 0 0 0 0.59 1 High confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 83 0.07 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 18 1797061 70607438 1 12 618 0 1 2 0 9 0.3 0.8 18 0 0 18 5 9 21 5 6 90.2 88.93 6.42 1 4 3 Whitelist BRCA-US X 0.68 0.95 0 0 0.59 1 Linked to low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 15 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 19 4093655 10661190 6 13 618 1 3 2 0 7 0.34 0 14 0 0 14 3 4 32 3 5 90.2 91.9 0 0 8 15 Whitelist BRCA-US 8 0.68 0 0 0 0.59 1 Linked to low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 19 0.02 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 20 30470367 31487961 1 2 618 0 0 0 2 0 0.11 0.01 2 0 0 NA NA NA 7 3 3 90.2 91.98 0 0 12 13 Whitelist BRCA-US 0.54 0.03 0 0 0.48 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 21 NA NA 0 0 618 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA 8 4 7 0 0 0 0 0 0 Whitelist BRCA-US NA 0.71 NA NA NA 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 22 18097470 47870155 1 6 618 2 0 1 0 3 0.3 0.46 10 0 0 10 4 5 13 4 5 90.2 100 0 0 8 13 Whitelist BRCA-US 0.54 0.7 0 0 0.59 1 No BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA NA 9 0.01 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 X 3683303 142419844 53 94 618 10 13 14 16 41 0.7 0 77 0 0 77 5 7 78 5 7 90.2 39.02 57.55 4 2 6 Whitelist BRCA-US 17_18_8 0.67 0 0 0 0.78 1 Low confidence BRCA-US 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 BRCA 0.7 5.48 Breast-AdenoCA With other complex events 147 0.12 frameshift_deletion,17_7577067_-_TGCGGAGATTCTCTTCCTC,CN:4 5 BRCA-US DO5200 TCGA-BH-A18U 233b02f3-c4f0-4a67-9db5-e68d5cdaccb6 female deceased C50.4 72 1563 NA NA Included Breast-AdenoCA BRCA US 1 51.41 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 1 113501076 116852204 1 2 190 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 31.08 45.47 54.53 0 2 NA Whitelist BRCA-US 0.54 0 0 0 0.48 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 2 NA NA 0 0 190 0 0 0 0 0 NA 0 NA 0.3 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0.3 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 3 NA NA 0 0 190 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.12 0 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 4 NA NA 0 0 190 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.08 0 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 5 65252688 85815560 2 2 190 0 0 1 1 0 0.57 0.46 3 0 0 NA NA NA NA NA NA 31.08 0 99.86 1 2 1 Whitelist BRCA-US 0.68 0.7 0 0 0.64 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 6 NA NA 0 0 190 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 0 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 7 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 8 NA NA 0 0 190 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 9 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 10 NA NA 0 0 190 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.17 0 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 11 71728724 89615555 2 5 190 1 1 0 0 3 0.57 0 7 0 0 7 4 5 23 4 11 31.08 48.97 50.61 0 1 2 Whitelist BRCA-US 17 0.93 0 0 0 0.64 0 Linked to low confidence BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA With other complex events 7 0.02 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 12 NA NA 0 0 190 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 13 NA NA 0 0 190 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 14 NA NA 0 0 190 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.12 NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 15 NA NA 0 0 190 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 16 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 17 11610139 39394274 103 127 190 35 20 27 21 24 0.14 0 128 0 0 128 5 9 129 5 9 31.08 48.55 51.42 10 8 1 Whitelist BRCA-US 0.62 0 0 0 0.58 0 Low confidence BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA With other complex events 230 0.61 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 18 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 19 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 20 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 21 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 22 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::2779fa01-ac93-4e80-a997-3385f72172c3 X NA NA 0 0 190 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.11 0 NA NA 0 No BRCA-US 2779fa01-ac93-4e80-a997-3385f72172c3 BRCA 0.85 2.06 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3140 TCGA-A8-A08S 2779fa01-ac93-4e80-a997-3385f72172c3 female alive C50.9 71 NA 580 NA Included Breast-AdenoCA BRCA US 0 19.08 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 1 8516636 111647232 5 27 116 0 3 1 1 22 0.28 0 12 0 0 12 4 10 19 4 11 83.19 66.84 33.16 1 1 3 Whitelist BRCA-US 10 0.54 0 0 0 0.59 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 32 0.14 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 2 8865754 44420305 2 6 116 1 0 0 1 4 0.57 0.74 8 0 0 8 6 6 8 6 6 83.19 99.9 0 0 3 1 Whitelist BRCA-US 0.62 0.91 0 0 0.64 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 8 0.03 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 3 124743480 190056561 4 26 116 3 0 1 0 22 0.11 0 19 0 0 19 4 9 27 5 11 83.19 82.66 17.24 0 2 3 Whitelist BRCA-US 10 0.68 0 0 0 0.48 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 30 0.13 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 4 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 5 12256203 37377906 1 11 116 0 0 1 1 9 0.57 0 10 0 0 10 3 5 16 3 5 83.19 99.87 0 0 5 7 Whitelist BRCA-US 10 0.68 0.01 0 0 0.64 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 13 0.06 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 6 NA NA 0 0 116 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.16 NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 7 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 8 2201427 2360322 1 1 116 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 83.19 99.99 0 0 4 NA Whitelist BRCA-US 0.62 0.12 NA NA 0.59 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 2 0.01 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 9 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 10 45002072 118566528 1 11 116 2 0 0 0 9 0.11 0 15 0 0 15 6 6 18 6 6 83.19 94.16 5.66 3 2 3 Whitelist BRCA-US 0.62 0 0 0 0.48 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 13 0.06 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 11 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 12 110883997 125280550 7 7 116 1 3 1 2 0 0.67 0.5 10 0 0 10 3 4 11 3 4 83.19 92.23 4.03 1 6 2 Whitelist BRCA-US 0.77 0.75 0 0 0.74 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 14 0.06 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 13 33547693 33559866 1 1 116 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 83.19 29.13 70.87 0 2 NA Whitelist BRCA-US 0.62 0.42 NA NA 0.59 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 2 0.01 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 14 100819629 102872968 3 27 116 1 0 1 1 24 0.8 0 8 0 0 8 3 5 13 4 6 83.19 97.82 1.67 0 4 5 Whitelist BRCA-US 10 0.87 0 0 0 0.84 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 30 0.13 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 16 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 17 50377400 63525147 7 7 116 2 2 1 2 0 0.93 0 14 0 0 14 9 13 21 9 13 83.19 40.82 53.9 1 4 2 Whitelist BRCA-US 0.96 0.01 0 0 0.95 1 High confidence BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA Before polyploidization 14 0.06 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 18 NA NA 0 0 116 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 19 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 20 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 21 36916017 36946798 1 1 116 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 83.19 77.83 0 0 4 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 2 0.01 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 22 NA NA 0 0 116 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 X NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 BRCA 0.31 3.39 Breast-LobularCA NA 0 0 nonsynonymous_SNV,17_7577543_T_C,CN:2 6 BRCA-US DO2647 TCGA-A8-A09X 27b05b15-a44b-45ed-a6e3-e7d1ca488ea9 female deceased C50.9 62 426 NA NA Included Breast-LobularCA BRCA US 1 14.01 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 1 153229764 225437151 16 49 596 4 1 6 5 33 0.32 0 49 0 0 49 9 12 123 29 29 56.5 98.64 1.36 61 6 5 Whitelist BRCA-US 14_22 0.68 0 0 0 0.59 1 High confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA With other complex events 65 0.05 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 2 46086939 46350708 2 2 596 2 0 0 0 0 0.11 0.16 4 0 0 4 3 4 79 10 13 56.5 98.8 1.1 0 3 2 Whitelist BRCA-US 0.54 0.37 0 0 0.48 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 4 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 3 4487143 195190136 1 34 596 28 1 2 2 1 0 1 89 0 0 89 11 15 90 11 12 56.5 67.91 29.03 0 4 3 Whitelist BRCA-US 0 1 0 0 0 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 67 0.06 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 4 1211134 170990779 1 14 596 10 1 0 0 3 0 0 37 0 0 37 7 21 38 8 8 56.5 60.43 39.55 0 2 3 Whitelist BRCA-US X 0.05 0 0 0 0 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 25 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 5 1890854 172550754 1 16 596 9 0 2 2 3 0 0.01 27 0 0 27 19 19 28 19 19 56.5 30.87 66.25 1 2 1 Whitelist BRCA-US 0.34 0.03 0 0 0.09 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 29 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 6 17804332 26249076 2 6 596 2 0 2 2 0 0.57 0.14 15 0 0 15 5 11 47 13 13 56.5 15.85 84.01 0 4 3 Whitelist BRCA-US 0.68 0.34 0 0 0.64 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 12 0.01 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 7 70593181 71739371 2 2 596 1 1 0 0 0 0.57 0.41 2 0 0 NA NA NA 52 10 10 56.5 85.59 11.86 0 3 4 Whitelist BRCA-US 0.68 0.66 0 0 0.64 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 4 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 8 17394507 100542792 1 7 596 7 0 0 0 0 0 0 16 0 0 16 10 16 22 12 12 56.5 3.98 95.92 0 2 1 Whitelist BRCA-US 0.02 0 0 0 0.01 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 14 0.01 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 9 38002140 140385138 24 25 596 4 9 6 5 1 0.51 0 73 0 0 73 21 29 87 21 23 56.5 78.18 21.2 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.64 1 High confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA With other complex events 49 0.04 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 10 23170902 117935907 1 17 596 12 1 0 0 4 0 0.12 26 0 0 26 12 12 33 13 15 56.5 98.53 1.3 0 3 2 Whitelist BRCA-US 12 0 0.3 0 0 0 1 Linked to high confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA With other complex events 30 0.03 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 11 16375267 126235971 1 13 596 10 3 0 0 0 0 0.01 29 0 0 29 7 29 36 9 9 56.5 45.25 54.33 0 2 1 Whitelist BRCA-US 0.02 0.03 0 0 0.01 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 26 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 12 677748 48135242 80 84 596 17 16 29 18 4 0.14 0 161 0 0 161 7 11 203 17 20 56.5 77.8 18.52 2 2 6 Whitelist BRCA-US 10 0.62 0 0 0 0.59 1 High confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA With other complex events 164 0.14 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 13 23906490 101146717 1 10 596 9 1 0 0 0 0 0.03 20 0 0 20 14 20 21 15 15 56.5 1.84 98.16 0 2 1 Whitelist BRCA-US 0.01 0.12 0 0 0.01 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 20 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 14 56204105 67427196 5 32 596 1 1 2 1 27 0.9 0 32 0 0 32 8 19 50 10 10 56.5 47.14 49.15 10 6 5 Whitelist BRCA-US 1_22 0.87 0 0 0 0.92 1 High confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA With other complex events 37 0.03 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 15 76618222 77198841 2 2 596 0 0 1 1 0 0.57 0.9 2 0 0 NA NA NA 33 5 9 56.5 99.09 0.79 0 3 4 Whitelist BRCA-US 0.68 1 0 0 0.64 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 4 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 16 148109 89946753 1 18 596 12 1 2 0 3 0 0.2 39 0 0 39 7 28 40 7 7 56.5 99.19 0.35 0 3 4 Whitelist BRCA-US 0.01 0.43 0 0 0 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 33 0.03 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 17 682611 78798143 1 16 596 10 2 1 1 2 0 0.45 36 0 0 36 19 21 37 19 21 56.5 3.43 96.55 0 2 1 Whitelist BRCA-US 0.21 0.69 0 0 0.05 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 30 0.03 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 18 NA NA 0 0 596 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 19 3006701 18887466 1 11 596 5 3 0 0 3 0.03 0.46 17 0 0 17 13 17 22 13 17 56.5 65.46 34.36 0 3 2 Whitelist BRCA-US 0.54 0.7 0 0 0.33 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 19 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 20 36115629 39768047 2 2 596 1 0 1 0 0 0.57 0.2 1 0 0 NA NA NA 14 5 5 56.5 98.11 0.9 0 3 NA Whitelist BRCA-US 0.68 0.43 0 0 0.64 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 4 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 21 38467696 38569567 1 1 596 0 0 1 0 0 0.39 0.13 3 NA NA NA NA NA 5 5 5 56.5 0.37 76.98 0 2 1 Whitelist BRCA-US 0.62 0.33 NA NA 0.59 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 2 0 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 22 17885241 46307016 1 15 596 5 0 0 0 10 0 0 28 0 0 28 21 22 31 21 22 56.5 86.99 1.9 3 3 4 Whitelist BRCA-US 1 0.62 0 0 0 0.07 1 Linked to high confidence BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA After polyploidization 20 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2a84997d-ccee-4f46-bea2-752534f26416 X 2221350 153108115 1 11 596 9 0 0 0 2 0 0 28 0 0 28 23 23 30 23 23 56.5 6.24 93.53 0 2 1 Whitelist BRCA-US 4 0.02 0.02 0 0 0 1 No BRCA-US 2a84997d-ccee-4f46-bea2-752534f26416 BRCA 0.46 2.83 Breast-AdenoCA NA 20 0.02 stopgain,17_7579415_T_C,CN:2 3 BRCA-US DO2694 TCGA-E2-A1LL 2a84997d-ccee-4f46-bea2-752534f26416 female alive C50.9 73 NA 1014 NA Included Breast-AdenoCA BRCA US 0 33.36 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 1 202357683 216952427 8 18 105 3 5 0 0 10 0.03 0 12 0 0 12 5 11 30 5 6 13.77 96.7 0.29 15 7 8 Whitelist BRCA-US 11 0.68 0 0 0 0.33 0 Low confidence BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA With other complex events 26 0.12 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 2 NA NA 0 0 105 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 3 47119628 51706775 5 5 105 1 1 2 1 0 0.9 0.85 6 0 0 6 6 6 9 9 9 13.77 0.54 99.45 0 1 2 Whitelist BRCA-US 0.93 0.98 0 0 0.92 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 10 0.05 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 4 138331513 138345487 1 1 105 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 13.77 0 99.99 0 2 NA Whitelist BRCA-US 0.62 0.05 NA NA 0.59 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 2 0.01 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 5 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 6 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 7 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 8 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 9 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 10 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 11 68233404 80019931 48 74 105 17 13 10 8 26 0.28 0 57 0 0 57 5 10 65 6 6 13.77 54.38 41.79 3 4 9 Whitelist BRCA-US 0.62 0 0 0 0.59 0 Low confidence BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA With other complex events 122 0.58 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 12 120761424 121657653 1 1 105 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 13.77 1.43 98.49 0 1 NA Whitelist BRCA-US 0.62 0.26 NA NA 0.59 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 2 0.01 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 13 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 14 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 15 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 16 34980616 35152700 1 1 105 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 13.77 48.37 51.3 0 2 NA Whitelist BRCA-US 0.62 0.77 NA NA 0.59 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 2 0.01 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 17 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 18 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 19 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 20 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 21 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e 22 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::2d29a4ac-98e7-4663-9dd6-5681bc32ac2e X NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e BRCA 0.5 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO3500 TCGA-A2-A3KC 2d29a4ac-98e7-4663-9dd6-5681bc32ac2e female alive C50.9 55 NA 363 NA Included Breast-LobularCA BRCA US 0 11.94 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 1 150164066 242610593 11 26 429 1 6 2 2 15 0.15 0 61 0 0 61 7 7 96 7 11 53.35 88.29 11.71 1 4 5 Whitelist BRCA-US 2 0.54 0 0 0 0.59 1 High confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 37 0.04 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 2 42932222 160908996 2 15 429 0 2 1 1 11 0.57 0.3 38 0 0 38 5 6 53 10 10 53.35 84.77 12.55 0 5 4 Whitelist BRCA-US 1_17_18 0.85 0.54 0 0 0.64 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 19 0.02 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 3 23666695 186721584 1 20 429 3 10 1 0 6 0 0.3 30 0 0 30 7 7 32 7 7 53.35 52.58 44.27 0 5 4 Whitelist BRCA-US 1 0.54 0.54 0 0 0.04 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 34 0.04 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 4 38438533 64421073 2 4 429 1 1 0 0 2 0.57 0.01 8 0 0 8 3 5 20 4 6 53.35 7.93 92.05 0 3 2 Whitelist BRCA-US 0.62 0.03 0 0 0.64 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 6 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 5 56684755 57764263 2 4 429 1 1 0 0 2 0.57 0.92 4 0 0 4 0 3 31 5 5 53.35 68 29.35 0 3 4 Whitelist BRCA-US 1 0.62 1 0 0 0.64 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 6 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 6 5315586 152994099 1 15 429 2 8 2 0 3 0.01 0.19 27 0 0 27 4 13 30 4 13 53.35 76.32 20.78 0 5 3 Whitelist BRCA-US 0.21 0.41 0 0 0.16 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 27 0.03 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 7 5248751 135214580 1 15 429 3 6 0 1 5 0.04 0.91 23 0 0 23 5 8 26 5 8 53.35 77.3 22.42 0 3 4 Whitelist BRCA-US 0.54 1 0 0 0.39 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 25 0.03 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 8 74134354 74495112 3 5 429 0 1 1 1 2 0.8 0.01 7 0 0 7 0 3 49 7 12 53.35 82.03 14.45 0 4 1 Whitelist BRCA-US 0.93 0.04 0 0 0.84 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 8 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 9 13161516 13817059 4 4 429 0 4 0 0 0 0.01 0.32 8 0 0 8 0 4 25 7 7 53.35 29.12 70.18 0 2 3 Whitelist BRCA-US 0.21 0.57 0 0 0.16 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 8 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 10 8421238 126684700 3 11 429 0 5 0 1 5 0.01 0.3 14 0 0 14 5 14 14 5 5 53.35 34.27 65.55 0 3 4 Whitelist BRCA-US 7 0.62 0.55 0 0 0.19 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 17 0.02 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 11 34547022 35065164 3 4 429 0 3 0 0 1 0.03 0.03 6 0 0 6 3 4 31 7 7 53.35 51.63 44.3 0 6 3 Whitelist BRCA-US 0.54 0.11 0 0 0.33 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 7 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 12 27880056 131551013 16 24 429 3 5 5 3 8 0.8 0 48 0 0 48 8 33 58 8 11 53.35 82.03 17.4 1 3 2 Whitelist BRCA-US 10 0.68 0 0 0 0.84 1 High confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 40 0.05 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 13 41932149 112209905 1 4 429 1 2 0 0 1 0.3 0.02 9 0 0 9 5 7 10 5 5 53.35 38.97 61.03 0 1 2 Whitelist BRCA-US 0.54 0.07 0 0 0.59 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 7 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 14 51821698 52051595 3 3 429 1 2 0 0 0 0.3 0.89 5 0 0 5 3 5 20 6 15 53.35 15.87 83.51 0 2 4 Whitelist BRCA-US 0.62 1 0 0 0.59 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 6 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 15 33414202 101220659 1 7 429 0 4 0 0 3 0.01 0.3 11 0 0 11 3 6 12 4 6 53.35 53.08 46.81 0 3 4 Whitelist BRCA-US 0.47 0.55 0 0 0.16 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 11 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 16 2293192 84813453 1 10 429 1 4 0 0 5 0.04 0.77 10 0 0 10 5 10 11 5 11 53.35 17.54 82.37 0 2 3 Whitelist BRCA-US 0.54 0.93 0 0 0.36 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 15 0.02 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 17 37013951 76467302 1 6 429 1 2 0 0 3 0.3 0.37 8 0 0 8 4 6 9 5 5 53.35 0.82 99.17 0 2 3 Whitelist BRCA-US 2 0.93 0.62 0 0 0.59 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 9 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 18 23484248 62397918 1 5 429 0 3 1 1 0 0.28 0.55 10 0 0 10 5 8 15 5 8 53.35 14.03 85.93 0 2 3 Whitelist BRCA-US 0.62 0.78 0 0 0.59 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 10 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 19 1056746 56229879 1 15 429 2 4 0 0 9 0.06 0.01 18 0 0 18 4 10 19 4 4 53.35 70.02 29.81 0 3 2 Whitelist BRCA-US 1 0.62 0.06 0 0 0.48 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 21 0.02 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 20 52065260 53260727 2 4 429 0 2 0 0 2 0.11 0 6 0 0 6 3 4 26 5 7 53.35 84.43 14.6 0 5 9 Whitelist BRCA-US 0.54 0 0 0 0.48 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 6 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 21 43213933 43227690 1 1 429 0 1 0 0 0 0.39 0.38 2 0 NA NA NA NA 5 5 5 53.35 0.15 77.13 0 2 3 Whitelist BRCA-US 0.62 0.63 0 NA 0.59 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 22 38310082 46487009 1 5 429 0 2 0 0 3 0.11 0.65 5 0 0 5 3 3 7 3 4 53.35 3.15 96.85 0 4 2 Whitelist BRCA-US 3 0.68 0.86 0 0 0.48 1 No BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA NA 7 0.01 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::324bcba2-f6a4-45a6-807c-215bdffcca21 X 10108104 46019044 1 9 429 1 2 2 2 2 0.93 0.66 16 0 0 16 4 5 25 4 6 53.35 80.13 19.79 0 4 1 Whitelist BRCA-US 12 0.97 0.87 0 0 0.95 1 Linked to high confidence BRCA-US 324bcba2-f6a4-45a6-807c-215bdffcca21 BRCA 0.67 2.85 Breast-AdenoCA With other complex events 16 0.02 stopgain,17_7578263_A_G,CN:2 3 BRCA-US DO2995 TCGA-A2-A0D0 324bcba2-f6a4-45a6-807c-215bdffcca21 female alive C50.9 60 NA 643 NA Included Breast-AdenoCA BRCA US 0 21.15 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 1 150066880 242290225 12 12 83 1 2 3 6 0 0.2 0 21 0 0 21 7 7 35 7 7 57.91 23.43 76.57 0 4 2 Whitelist BRCA-US 0.62 0 0 0 0.59 1 High confidence BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA With other complex events 24 0.14 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 2 109407999 111782094 1 2 83 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 6 3 3 57.91 60.11 37.18 0 4 NA Whitelist BRCA-US 0.68 1 0 0 0.64 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 3 14792212 87661273 1 1 83 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 6 6 6 57.91 40.16 56.62 0 1 2 Whitelist BRCA-US 0.62 0.53 NA NA 0.59 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 4 NA NA 0 0 83 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 5 138119187 138384185 1 1 83 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 3 57.91 71.87 25.47 0 0 1 Whitelist BRCA-US 0.62 0.2 NA NA 0.59 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 6 110139422 115275149 1 2 83 2 0 0 0 0 0.11 0.49 4 0 0 4 4 4 5 5 5 57.91 0.12 99.66 0 1 2 Whitelist BRCA-US 0.54 0.73 0 0 0.48 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 7 NA NA 0 0 83 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.33 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 8 37716795 37732051 1 1 83 0 0 0 1 0 0.39 1 2 NA NA NA NA NA 4 0 0 57.91 29.44 67.14 0 1 6 Whitelist BRCA-US 0.62 1 NA NA 0.59 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 9 77644325 135223041 2 2 83 0 1 0 1 0 0.57 0.26 4 0 0 4 3 4 8 5 5 57.91 49.77 49.53 0 2 1 Whitelist BRCA-US 0.68 0.5 0 0 0.64 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 10 44185270 123630788 3 3 83 2 0 1 0 0 0.3 0.11 5 0 0 5 3 5 7 3 3 57.91 40.71 55.93 0 1 0 Whitelist BRCA-US 0.62 0.28 0 0 0.59 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 11 NA NA 0 0 83 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.95 0 NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 12 121195381 121302192 1 2 83 1 0 1 0 0 0.57 0.44 3 NA 0 NA NA NA 6 3 3 57.91 96.26 0 0 1 0 Whitelist BRCA-US 0.68 0.69 NA 0 0.64 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 13 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 14 NA NA 0 0 83 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 15 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 16 3960976 34686074 2 6 83 1 2 0 1 2 0.57 0 15 0 0 15 7 7 17 7 7 57.91 72.75 22.73 0 2 3 Whitelist BRCA-US 0.62 0 0 0 0.64 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 17 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 18 NA NA 0 0 83 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 19 NA NA 0 0 83 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.46 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 20 NA NA 0 0 83 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.51 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 21 14377605 23692259 4 4 83 1 2 1 0 0 0.57 0 19 0 0 19 3 6 24 5 6 57.91 25.16 52.2 2 2 6 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 22 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::359f12f9-5c41-48a4-85bc-fd7e307bf7d8 X NA NA 0 0 83 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.32 NA NA NA 1 No BRCA-US 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 BRCA 0.68 1.53 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 BRCA-US DO2842 TCGA-EW-A1P8 359f12f9-5c41-48a4-85bc-fd7e307bf7d8 female deceased C50.9 58 239 NA NA Included Breast-AdenoCA BRCA US 1 7.86 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 1 151008031 217829219 1 3 54 0 1 1 1 0 0.8 1 4 0 0 4 3 4 8 3 3 64 41.99 58.01 1 6 5 Whitelist BRCA-US 0.87 1 0 0 0.84 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 2 NA NA 0 0 54 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.24 NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 3 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 4 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 5 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 6 30585470 30860130 1 1 54 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 3 64 99.73 0 1 4 6 Whitelist BRCA-US 0.62 0.63 NA NA 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 7 NA NA 0 0 54 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.62 NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 8 43520760 142734142 1 11 54 3 2 0 0 6 0.14 0 12 0 0 12 4 6 17 4 5 64 96.58 0 14 3 12 Whitelist BRCA-US 0.34 0 0 0 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 16 0.15 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 9 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 10 122641710 122801553 1 1 54 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 64 99.82 0 5 4 5 Whitelist BRCA-US 0.62 0.76 NA NA 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 11 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 12 15264946 15277086 1 1 54 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 6 64 96.13 0 2 3 4 Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 13 85429917 85464081 1 1 54 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 64 0.03 99.97 0 2 3 Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 14 39308326 42343339 1 5 54 1 0 1 0 3 0.57 0.03 5 0 0 5 5 5 8 7 8 64 97.21 0 1 4 5 Whitelist BRCA-US 19 0.62 0.1 0 0 0.64 0 Linked to low confidence BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA After polyploidization 7 0.06 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 16 53234510 89590055 3 3 54 3 0 0 0 0 0.03 0.18 3 0 0 NA NA NA 7 3 3 64 40.85 58.84 1 4 2 Whitelist BRCA-US 0.41 0.39 0 0 0.33 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 17 38960247 59244107 3 4 54 2 0 0 1 1 0.3 0 5 0 0 5 5 5 9 8 8 64 68.22 27.33 5 6 5 Whitelist BRCA-US 0.68 0 0 0 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 18 45432246 45916682 1 1 54 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 64 0.62 99.37 0 2 3 Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 19 28234779 29767781 6 7 54 2 0 2 2 1 0.57 0 7 0 0 7 6 7 28 8 8 64 70.81 21.9 2 4 5 Whitelist BRCA-US 0.68 0 0 0 0.64 0 Low confidence BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA After polyploidization 13 0.12 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::38a8b734-9acc-42f9-b5b7-e51b0dfc6504 X NA NA 0 0 54 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 0 No BRCA-US 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 BRCA 0.73 3.36 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_T_C,CN:2 4 BRCA-US DO4796 TCGA-A8-A092 38a8b734-9acc-42f9-b5b7-e51b0dfc6504 female alive C50.9 48 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 1 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 2 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 3 105542102 189676521 3 6 35 2 0 0 1 3 0.3 0.01 1 0 0 NA NA NA NA NA NA 9.96 0 99.86 0 2 NA Whitelist BRCA-US 0.62 0.05 0 0 0.59 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 9 0.13 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 6 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 8 NA NA 0 0 35 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.89 NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 9 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 11 61157427 61932692 1 3 35 1 0 0 0 2 0.39 0.22 4 NA 0 4 3 4 5 3 5 9.96 0.57 98.99 0 1 2 Whitelist BRCA-US 17 0.87 0.45 NA 0 0.59 1 Linked to high confidence BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA Canonical without polyploidization 4 0.06 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 12 NA NA 0 0 35 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.88 NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 13 NA NA 0 0 35 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.3 NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 14 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 16 48581140 59235905 2 3 35 1 1 0 0 1 0.57 0.07 3 NA 0 NA NA NA 5 3 3 9.96 99.69 0 0 1 6 Whitelist BRCA-US 0.62 0.2 NA 0 0.64 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 5 0.07 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 17 5222718 62920805 10 15 35 2 3 3 2 5 0.94 0 25 0 0 25 7 13 26 8 13 9.96 98.68 1.31 2 1 3 Whitelist BRCA-US 0.93 0 0 0 0.96 1 High confidence BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA With other complex events 25 0.36 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 19 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 X NA NA 0 0 35 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.26 NA NA NA 1 No BRCA-US 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 BRCA 0.43 2.15 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO4719 TCGA-A2-A259 3fc3755d-a3f8-4e2c-813f-ff124f2a75c1 female alive C50.9 70 NA 1286 NA Included Breast-AdenoCA BRCA US 0 42.3 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 1 94026241 145056864 18 37 744 4 6 5 3 19 0.77 0 51 0 0 51 4 6 116 7 11 63.97 74.15 22.83 12 8 3 Whitelist BRCA-US 17_8 0.82 0 0 0 0.84 0 Low confidence BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA With other complex events 55 0.04 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 2 18348976 72718039 3 6 744 1 1 1 0 3 0.8 0.6 24 0 0 24 7 15 58 7 16 63.97 89.19 10.71 0 3 5 Whitelist BRCA-US 0.62 0.81 0 0 0.84 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 3 3385898 154169466 3 10 744 2 0 1 0 7 0.3 0.89 31 0 0 31 7 9 54 7 9 63.97 65.6 34.29 6 4 5 Whitelist BRCA-US 4_7 0.62 1 0 0 0.59 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 False positive; manually removed BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 4 10183 123261413 3 16 744 0 0 2 1 13 0.3 0.83 41 0 0 41 6 8 50 6 8 63.97 28.61 68.82 3 4 2 Whitelist BRCA-US 3 0.62 0.97 0 0 0.59 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 19 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 5 22975535 152913533 4 9 744 1 1 1 1 5 1 0.29 19 0 0 19 5 7 31 5 9 63.97 29.69 70.19 0 2 4 Whitelist BRCA-US 13 0.68 0.53 0 0 1 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 6 6025768 153367099 1 17 744 1 12 1 0 3 0 0.01 26 0 0 26 7 19 29 7 19 63.97 73.46 26.27 0 4 5 Whitelist BRCA-US 2_7 0.03 0.04 0 0 0 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 31 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 7 1396546 142881743 1 22 744 1 9 0 0 12 0 0.46 37 0 0 37 5 9 43 5 9 63.97 54.45 43 0 4 3 Whitelist BRCA-US 12_3_6 0.54 0.71 0 0 0.01 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 8 1680713 143764779 9 22 744 2 5 1 1 13 0.19 0 56 0 0 56 7 8 57 7 8 63.97 79.58 20.42 6 4 3 Whitelist BRCA-US 17 0.89 0.02 0 0 0.59 0 Linked to low confidence BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA With other complex events 31 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 False positive; manually removed BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 9 4015715 134884129 1 21 744 2 9 0 0 10 0 0.85 34 0 0 34 8 15 35 8 15 63.97 35.18 61.71 0 2 4 Whitelist BRCA-US 13_20 0.58 0.98 0 0 0.02 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 10 11671178 21147693 4 10 744 1 1 1 1 6 1 0 13 0 0 13 3 7 54 7 22 63.97 50.54 49.28 0 6 7 Whitelist BRCA-US 18 0.68 0.03 0 0 1 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 11 29518026 43185828 2 2 744 0 0 1 1 0 0.57 0.34 4 0 0 4 4 4 39 6 8 63.97 64.24 35.33 0 2 3 Whitelist BRCA-US 0.68 0.59 0 0 0.64 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 12 9556035 123265893 1 17 744 2 9 0 0 6 0 0.6 33 0 0 33 5 12 36 5 12 63.97 99.81 0.11 0 4 5 Whitelist BRCA-US 11_7 0.25 0.82 0 0 0.02 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 28 0.02 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 13 25976445 101450692 1 14 744 0 6 0 0 8 0 0.55 15 0 0 15 5 11 16 5 7 63.97 54.7 45.3 0 4 2 Whitelist BRCA-US 7_9 0.23 0.77 0 0 0.03 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 20 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 14 28384265 101893735 1 9 744 1 6 0 0 2 0 0.6 20 0 0 20 3 6 25 3 7 63.97 32.44 63.85 2 4 2 Whitelist BRCA-US 0.12 0.81 0 0 0.09 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 16 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 15 44656756 78646824 1 8 744 1 5 0 1 1 0.04 0.06 14 0 0 14 9 11 14 9 11 63.97 55.44 44.47 0 3 6 Whitelist BRCA-US 0.54 0.18 0 0 0.38 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 16 10641774 47135100 1 4 744 0 4 0 0 0 0.01 0.82 12 0 0 12 7 12 22 7 19 63.97 77.61 22.29 0 4 6 Whitelist BRCA-US 0.21 0.96 0 0 0.16 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 17 31874561 36100026 2 15 744 0 1 0 3 11 0.11 0 17 0 0 17 5 5 52 5 7 63.97 66.71 28.26 1 8 6 Whitelist BRCA-US 8 0.73 0 0 0 0.48 0 Linked to low confidence BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA With other complex events 19 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 18 50319241 66911358 3 3 744 1 0 1 1 0 0.8 0.11 6 0 0 6 6 6 36 9 9 63.97 99.96 0 0 3 4 Whitelist BRCA-US 0.87 0.29 0 0 0.84 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 19 2541887 11552300 21 22 744 2 9 5 5 1 0.19 0 30 0 0 30 3 5 52 7 8 63.97 93.72 6.11 5 6 8 Whitelist BRCA-US 0.62 0 0 0 0.59 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 43 0.03 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 20 4240497 61894943 1 13 744 2 6 0 0 5 0.01 0.1 23 0 0 23 10 10 24 10 11 63.97 92.34 6.68 0 6 4 Whitelist BRCA-US 9 0.21 0.26 0 0 0.16 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 21 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 21 46739786 48018021 7 8 744 2 1 2 2 1 0.93 0.02 7 0 0 7 3 5 19 4 6 63.97 76.62 0.57 5 1 2 Whitelist BRCA-US 1 0.07 0 0 0.95 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a 22 17842574 47068969 2 5 744 0 0 1 1 3 0.57 0.01 18 0 0 18 5 8 22 5 8 63.97 72.17 16.72 0 4 5 Whitelist BRCA-US 0.62 0.03 0 0 0.64 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 7 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::441919eb-8c9f-478c-bda3-8de4f8295e8a X 26593355 86426668 2 3 744 0 0 1 1 1 0.57 0.04 7 0 0 7 3 5 21 5 5 63.97 99.76 0.01 0 3 4 Whitelist BRCA-US 0.87 0.13 0 0 0.64 0 No BRCA-US 441919eb-8c9f-478c-bda3-8de4f8295e8a BRCA 0.5 3.35 Breast-AdenoCA NA 5 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 4 BRCA-US DO2055 TCGA-C8-A12L 441919eb-8c9f-478c-bda3-8de4f8295e8a female alive C50.9 67 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 1 14008207 14451476 1 1 320 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 3 4 79.76 87.89 12.11 0 0 2 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 2 86790782 87127821 2 4 320 0 2 0 0 2 0.11 0 2 0 0 NA NA NA 12 3 6 79.76 99.89 0 0 3 5 Whitelist BRCA-US 0.54 0.01 0 0 0.48 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 3 79667212 191335908 103 158 320 18 22 35 28 55 0.09 0 189 0 0 189 8 8 197 8 8 79.76 46.01 53.88 1 4 6 Whitelist BRCA-US 17 0.62 0 0 0 0.48 1 High confidence BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA With other complex events 261 0.41 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 4 9848205 16027958 4 5 320 0 1 1 2 1 0.57 0 7 0 0 7 0 4 12 5 5 79.76 73.37 24.26 0 2 4 Whitelist BRCA-US 0.68 0.02 0 0 0.64 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 9 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 5 44659590 44790911 1 1 320 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 79.76 99.89 0 0 3 5 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 6 1867338 11520901 1 1 320 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 79.76 99.76 0 0 4 5 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 7 NA NA 0 0 320 0 0 0 0 0 NA 0 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 8 13658370 76896511 29 29 320 10 8 5 6 0 0.57 0 54 0 0 54 7 13 57 7 13 79.76 67.1 32.49 0 2 4 Whitelist BRCA-US 0.68 0 0 0 0.64 1 High confidence BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA With other complex events 58 0.09 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 9 NA NA 0 0 320 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 10 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 11 27599795 70669763 4 5 320 1 1 1 1 1 1 0 10 0 0 10 4 8 11 4 4 79.76 96.24 0 0 3 5 Whitelist BRCA-US 0.93 0.03 0 0 1 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 9 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 12 71652097 77261360 1 2 320 0 1 1 0 0 0.57 0.03 4 0 0 4 3 4 13 5 5 79.76 96.09 0.17 0 4 3 Whitelist BRCA-US 0.68 0.12 0 0 0.64 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 13 NA NA 0 0 320 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 14 NA NA 0 0 320 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.34 NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 15 NA NA 0 0 320 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 16 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 17 47241742 74862785 26 41 320 2 4 9 11 15 0.04 0 71 0 0 71 6 7 125 6 7 79.76 56.57 38.98 1 14 12 Whitelist BRCA-US 22_3 0.62 0 0 0 0.43 1 Low confidence BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA With other complex events 67 0.1 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 18 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 19 13499798 19355786 1 2 320 1 0 0 1 0 0.57 0.23 5 NA 0 5 5 5 8 7 8 79.76 32.41 60.21 0 4 2 Whitelist BRCA-US 0.68 0.46 NA 0 0.64 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 20 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 21 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 22 18266499 42732087 1 6 320 0 1 0 1 4 0.57 0 8 0 0 8 5 8 15 6 11 79.76 88.18 0 0 3 5 Whitelist BRCA-US 17 0.62 0 0 0 0.64 1 Linked to low confidence BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA After polyploidization 8 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::44bec761-b603-49c0-8634-f6bfe0319bb1 X 77834294 78177817 2 2 320 0 0 1 1 0 0.57 0 2 NA 0 NA NA NA 4 3 3 79.76 51.33 48.44 0 3 4 Whitelist BRCA-US 0.68 0 NA 0 0.64 1 No BRCA-US 44bec761-b603-49c0-8634-f6bfe0319bb1 BRCA 0.59 3.37 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5626 TCGA-AO-A0JM 44bec761-b603-49c0-8634-f6bfe0319bb1 female alive C50.9 40 NA 1826 NA Included Breast-AdenoCA BRCA US 0 60.07 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 1 35476309 80900916 2 4 165 2 0 1 1 0 0.57 0.03 8 0 0 8 4 8 19 4 5 35.03 85.4 11.27 0 3 4 Whitelist BRCA-US 0.68 0.11 0 0 0.64 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 2 148394397 175079035 5 5 165 1 2 1 1 0 0.9 0.16 1 0 0 NA NA NA NA NA NA 35.03 4.3 95.59 0 2 NA Whitelist BRCA-US 0.93 0.36 0 0 0.92 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 10 0.03 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 3 131733336 175259378 1 2 165 2 0 0 0 0 0.11 0.54 4 0 0 4 3 4 7 3 6 35.03 85.07 14.79 0 3 1 Whitelist BRCA-US 0.54 0.77 0 0 0.48 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 4 43524760 100225228 3 3 165 1 1 0 1 0 0.8 0.64 5 0 0 5 4 5 8 5 5 35.03 37.6 62.19 0 2 3 Whitelist BRCA-US 0.87 0.85 0 0 0.84 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 5 49611501 178595357 1 10 165 4 0 1 1 4 0.11 0.52 11 0 0 11 5 11 12 5 5 35.03 33.02 66.86 0 2 1 Whitelist BRCA-US 0.62 0.76 0 0 0.48 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 16 0.05 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 6 94741710 94768669 1 1 165 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 35.03 47.14 52.71 0 1 2 Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 7 NA NA 0 0 165 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 8 58936288 133056769 2 7 165 1 1 0 0 5 0.57 0 6 0 0 6 3 4 16 4 5 35.03 68.87 31.13 8 6 2 Whitelist BRCA-US 0.77 0 0 0 0.64 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 9 0.03 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 9 13187145 33124877 2 5 165 0 0 1 1 3 0.57 0.01 2 0 0 NA NA NA NA NA NA 35.03 47.69 51.61 0 2 3 Whitelist BRCA-US 0.68 0.03 0 0 0.64 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 7 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 10 145470 132124381 1 5 165 2 0 1 0 2 0.3 0.57 8 0 0 8 5 8 9 6 6 35.03 21.95 77.86 0 2 1 Whitelist BRCA-US 0.62 0.8 0 0 0.59 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 11 10892477 96040611 1 6 165 2 1 1 0 2 0.57 0.03 5 0 0 5 3 5 5 3 3 35.03 0.23 99.34 0 2 1 Whitelist BRCA-US 5 0.93 0.1 0 0 0.64 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 10 0.03 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 12 48581222 95438323 1 3 165 0 2 0 0 1 0.11 0.14 3 0 0 NA NA NA 5 5 5 35.03 20.68 79.24 0 3 2 Whitelist BRCA-US 0.62 0.33 0 0 0.48 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 5 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 13 32476034 96174696 1 4 165 3 0 0 0 1 0.03 0.52 7 0 0 7 5 7 9 5 5 35.03 50.82 49.18 0 1 0 Whitelist BRCA-US 0.54 0.76 0 0 0.33 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 7 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 14 NA NA 0 0 165 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.74 NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 15 NA NA 0 0 165 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.59 NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 16 62966532 69454817 1 1 165 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA NA NA NA 35.03 7.18 92.81 0 1 2 Whitelist BRCA-US 0.62 0.45 0 NA 0.59 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 17 NA NA 0 0 165 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.71 0 NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 18 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 19 47284326 47386937 1 1 165 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 4 3 3 35.03 4.87 94.95 0 2 3 Whitelist BRCA-US 0.62 0.03 0 NA 0.59 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 20 NA NA 0 0 165 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.1 0 NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 21 NA NA 0 0 165 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a 22 NA NA 0 0 165 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::49717f75-0f2d-4e1c-9a12-f1cd7877b80a X 6054518 128866292 4 4 165 1 1 1 1 0 1 0.05 3 0 0 NA NA NA 6 4 4 35.03 8.54 91.23 0 2 1 Whitelist BRCA-US 1 0.16 0 0 1 0 No BRCA-US 49717f75-0f2d-4e1c-9a12-f1cd7877b80a BRCA 0.92 2.14 Breast-AdenoCA NA 8 0.02 NA 2 BRCA-US DO2222 TCGA-AN-A04D 49717f75-0f2d-4e1c-9a12-f1cd7877b80a female alive C50.9 58 NA 52 NA Included Breast-AdenoCA BRCA US 0 1.71 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 1 42305400 49600927 5 6 423 0 2 2 1 1 0.53 0 8 0 0 8 3 5 58 4 7 68.14 68.12 28.58 2 3 6 Whitelist BRCA-US 0.62 0 0 0 0.64 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 2 115111736 198568025 25 63 423 6 6 8 5 38 0.86 0 63 0 0 63 5 9 83 5 6 68.14 78.99 18.06 4 3 5 Whitelist BRCA-US 15_17_8 0.99 0 0 0 0.9 0 Low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA With other complex events 88 0.1 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 3 15861896 184900550 1 19 423 6 2 1 0 10 0.03 0.45 22 0 0 22 8 15 23 8 8 68.14 96.54 0 1 3 4 Whitelist BRCA-US 17_8 0.62 0.69 0 0 0.33 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 28 0.03 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 4 61402560 61522274 2 5 423 1 0 1 0 3 0.57 0.85 5 0 0 5 3 5 27 5 8 68.14 40.7 59.28 2 5 6 Whitelist BRCA-US 8 0.68 0.98 0 0 0.64 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 7 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 5 21141285 106941823 1 7 423 5 0 0 0 2 0 0 10 0 0 10 6 10 14 6 6 68.14 42.26 54.59 0 1 2 Whitelist BRCA-US 0.47 0.01 0 0 0.07 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 12 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 6 95215495 100999723 3 8 423 0 2 1 0 5 0.3 0.84 4 0 0 4 0 3 26 5 7 68.14 96.72 0.45 0 3 1 Whitelist BRCA-US 0.87 0.98 0 0 0.59 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 11 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 7 34456315 155650504 1 11 423 5 1 1 0 4 0.04 0.04 6 0 0 6 3 5 8 3 3 68.14 99.77 0.01 1 3 2 Whitelist BRCA-US 8 0.54 0.14 0 0 0.38 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 18 0.02 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 8 35905735 108901612 5 55 423 1 2 0 2 50 0.53 0 55 0 0 55 6 13 84 6 7 68.14 88.49 8.09 1 3 8 Whitelist BRCA-US 16_2 0.88 0 0 0 0.64 0 Linked to low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA With other complex events 60 0.07 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 9 8785709 103111005 1 7 423 5 1 0 0 1 0.01 0.03 11 0 0 11 3 11 12 3 3 68.14 98.71 0.6 0 3 2 Whitelist BRCA-US 0.13 0.12 0 0 0.19 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 13 0.02 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 10 NA NA 0 0 423 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 11 832952 13425916 1 2 423 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 5 3 3 68.14 97.93 1.64 0 2 3 Whitelist BRCA-US 0.54 0.05 0 0 0.48 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 12 76313405 84839605 4 9 423 2 1 0 1 5 0.57 0.73 5 0 0 5 3 5 14 5 5 68.14 72.25 27.67 0 3 4 Whitelist BRCA-US 0.68 0.91 0 0 0.64 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 13 0.02 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 13 102610322 102622390 1 1 423 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 68.14 86.32 10.91 0 2 NA Whitelist BRCA-US 0.62 0 NA NA 0.59 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 14 24825314 69059375 1 20 423 2 2 0 0 16 0.26 0 21 0 0 21 4 4 29 4 4 68.14 21.34 75.74 4 4 5 Whitelist BRCA-US 0.66 0 0 0 0.59 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 24 0.03 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 15 56597551 99238231 1 6 423 1 1 0 0 4 0.57 0.18 5 0 0 5 5 5 7 7 7 68.14 22.26 77.63 0 2 1 Whitelist BRCA-US 16_2 0.54 0.4 0 0 0.64 0 Linked to low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA Canonical without polyploidization 8 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 16 1378342 30451829 3 12 423 0 3 0 0 9 0.03 0.29 16 0 0 16 5 10 19 5 5 68.14 84.33 11.15 5 3 2 Whitelist BRCA-US 15_8 0.62 0.53 0 0 0.33 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 15 0.02 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 17 2048893 25902797 1 7 423 1 1 1 1 3 1 0.45 6 0 0 6 5 6 14 5 5 68.14 63.2 32.36 1 3 5 Whitelist BRCA-US 2 0.96 0.7 0 0 1 0 Linked to low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA After polyploidization 11 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 18 6714837 10477636 12 26 423 5 3 2 2 14 0.57 0 11 0 0 11 4 5 14 4 5 68.14 57.51 37.77 0 3 4 Whitelist BRCA-US 17_8 0.63 0 0 0 0.64 0 Low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA With other complex events 38 0.04 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 19 27734571 41001824 8 31 423 2 4 2 0 23 0.26 0 36 0 0 36 3 4 45 4 8 68.14 65.68 27.04 6 8 7 Whitelist BRCA-US 16_2_8 0.54 0 0 0 0.59 0 Linked to low confidence BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA With other complex events 39 0.05 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 20 2963175 3446279 2 2 423 1 1 0 0 0 0.57 0.03 4 0 0 4 3 4 16 6 6 68.14 99.1 0.15 0 3 2 Whitelist BRCA-US 0.68 0.11 0 0 0.64 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 21 27375668 38773869 1 2 423 2 0 0 0 0 0.11 0.26 4 NA 0 4 4 4 5 5 5 68.14 77.35 0 0 3 4 Whitelist BRCA-US 0.54 0.5 NA 0 0.48 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a 22 19171234 31111118 5 5 423 1 1 3 0 0 0.28 0.17 10 0 0 10 3 4 15 3 5 68.14 31.84 57.05 0 8 2 Whitelist BRCA-US 0.62 0.39 0 0 0.59 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 10 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4da999a0-ef41-4a0b-b1d1-446b39cc855a X 112983507 124263053 1 4 423 4 0 0 0 0 0.01 0 6 0 0 6 3 6 7 4 4 68.14 0.44 99.34 0 1 2 Whitelist BRCA-US 0.21 0.02 0 0 0.16 0 No BRCA-US 4da999a0-ef41-4a0b-b1d1-446b39cc855a BRCA 0.77 3.16 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7577061_-_CTTT,CN:3 3 BRCA-US DO2551 TCGA-EW-A1PH 4da999a0-ef41-4a0b-b1d1-446b39cc855a female alive C50.9 52 NA 140 NA Included Breast-AdenoCA BRCA US 0 4.61 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 1 NA NA 0 0 59 0 0 0 0 0 NA 0.63 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.84 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 2 234299504 234316757 1 1 59 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA NA NA NA 8.35 0.01 99.9 0 1 2 Whitelist BRCA-US 0.62 0.96 0 NA 0.59 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 3 94529310 94550726 1 2 59 0 0 1 1 0 0.57 0.31 1 0 0 NA NA NA NA NA NA 8.35 0 99.95 0 2 NA Whitelist BRCA-US 0.68 0.55 0 0 0.64 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 4 0.03 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 4 NA NA 0 0 59 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 5 NA NA 0 0 59 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.94 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 6 NA NA 0 0 59 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.81 NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 7 NA NA 0 0 59 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.78 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 8 NA NA 0 0 59 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.31 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 9 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 11 NA NA 0 0 59 0 0 0 0 0 NA 0.35 NA 0.03 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.61 0.03 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 12 NA NA 0 0 59 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.61 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 13 19269444 21299359 2 3 59 0 1 0 1 1 0.57 0.02 3 0 0 NA NA NA 6 6 6 8.35 100 0 0 3 1 Whitelist BRCA-US 0.87 0.07 0 0 0.64 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 5 0.04 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 14 NA NA 0 0 59 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.9 NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 15 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 16 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 17 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 19 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 21 NA NA 0 0 59 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 X NA NA 0 0 59 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.04 0 NA NA 0 No BRCA-US 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 BRCA 0.9 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2096 TCGA-B6-A0X5 4e6edfe6-adcb-4c12-8ff4-38a79f5887e8 female deceased C50.9 61 2097 NA NA Included Breast-AdenoCA BRCA US 1 68.98 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 1 164572675 164683194 1 1 113 1 0 0 0 0 0.39 0.11 1 0 NA NA NA NA 5 3 5 56.77 99.98 0 0 7 NA Whitelist BRCA-US 0.62 0.29 0 NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 2 69856812 71232383 1 2 113 0 1 0 0 1 0.39 0.01 2 NA NA NA NA NA NA NA NA 56.77 99.89 0 0 3 4 Whitelist BRCA-US 0.54 0.03 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 3 176830738 176848536 1 1 113 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 56.77 0 99.85 0 2 NA Whitelist BRCA-US 0.62 0.1 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 4 114289248 114542300 1 1 113 0 0 0 1 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 56.77 99.99 0 0 3 NA Whitelist BRCA-US 0.62 0.04 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 5 265080 742492 2 2 113 2 0 0 0 0 0.11 1 3 0 0 NA NA NA 11 4 5 56.77 23.17 76.71 0 4 5 Whitelist BRCA-US 0.54 1 0 0 0.48 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 6 6520338 168564355 40 40 113 8 12 11 9 0 0.8 0 78 0 0 78 20 27 79 20 27 56.77 97.15 0 2 3 4 Whitelist BRCA-US 0.87 0 0 0 0.84 1 High confidence BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA With other complex events 80 0.35 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 7 94607326 94674859 1 1 113 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 56.77 99.73 0.04 0 2 3 Whitelist BRCA-US 0.62 0.76 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 8 41435083 42112143 6 6 113 3 1 1 1 0 0.57 0 13 0 0 13 0 4 35 3 4 56.77 71.74 24.83 0 17 19 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 9 14166376 14282560 1 1 113 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 56.77 0 99.29 0 2 NA Whitelist BRCA-US 0.62 0.33 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 10 NA NA 0 0 113 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.2 NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 11 129274134 129296049 1 1 113 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 56.77 0.02 99.56 0 1 2 Whitelist BRCA-US 0.62 0.2 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 12 120609911 120641693 1 1 113 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 56.77 0.02 99.89 0 1 2 Whitelist BRCA-US 0.62 0.21 NA NA 0.59 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 13 NA NA 0 0 113 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.41 NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 14 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 15 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 16 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 17 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 18 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 19 27822952 53535690 9 11 113 3 1 4 1 2 0.39 0 24 0 0 24 5 7 24 5 5 56.77 43.09 49.73 0 4 3 Whitelist BRCA-US 0.87 0 0 0 0.59 1 Low confidence BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA With other complex events 20 0.09 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 20 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 21 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 22 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::53886143-c1c6-40e9-88e6-e4e5e0271fc8 X 16428213 98616120 7 7 113 0 2 3 2 0 0.44 0.28 9 0 0 9 6 9 10 7 7 56.77 46.6 53.19 0 3 4 Whitelist BRCA-US 0.68 0.53 0 0 0.64 1 Low confidence BRCA-US 53886143-c1c6-40e9-88e6-e4e5e0271fc8 BRCA 0.54 2.98 Breast-AdenoCA After polyploidization 14 0.06 nonsynonymous_SNV,17_7579355_G_A,CN:3 2 BRCA-US DO44103 TCGA-A2-A3XX 53886143-c1c6-40e9-88e6-e4e5e0271fc8 female alive C50.9 49 NA 1168 NA Included Breast-AdenoCA BRCA US 0 38.42 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 1 72451050 72825898 1 1 252 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 8 3 6 83.31 84.53 15.41 0 4 5 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 2 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 3 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 4 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 5 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 6 62814937 78848211 1 1 252 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 83.31 40.53 59.31 0 2 3 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 7 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 8 47141968 146282239 72 72 252 17 23 16 16 0 0.6 0 129 0 0 129 17 54 136 17 17 83.31 57.26 39.23 0 4 6 Whitelist BRCA-US 0.7 0 0 0 0.67 1 High confidence BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA With other complex events 144 0.29 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 9 32991807 36221834 1 12 252 0 1 0 0 11 0.39 0.33 14 0 0 14 4 5 16 4 5 83.31 76.1 23.2 0 4 7 Whitelist BRCA-US 17 0.83 0.58 0 0 0.59 1 Linked to low confidence BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA With other complex events 13 0.03 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 10 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 11 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 12 100056779 100548446 1 1 252 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 83.31 99.55 0.37 0 2 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 13 NA NA 0 0 252 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 14 NA NA 0 0 252 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 15 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 16 NA NA 0 0 252 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.22 NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 17 27472457 78723957 141 158 252 29 28 42 42 17 0.16 0 232 0 0 232 5 8 235 7 10 83.31 38.19 61.8 0 4 6 Whitelist BRCA-US 0.62 0 0 0 0.59 1 Low confidence BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA With other complex events 299 0.59 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 18 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 19 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 20 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 21 NA NA 0 0 252 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 22 NA NA 0 0 252 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::5580b21a-2cdb-4777-ad79-6e06654144f5 X 35294274 37231617 2 2 252 0 0 1 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 83.31 99.77 0 0 2 3 Whitelist BRCA-US 0.68 0.01 0 0 0.64 1 No BRCA-US 5580b21a-2cdb-4777-ad79-6e06654144f5 BRCA 0.55 3.56 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4473 TCGA-E2-A15H 5580b21a-2cdb-4777-ad79-6e06654144f5 female alive C50.9 38 NA 42 NA Included Breast-AdenoCA BRCA US 0 1.38 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 1 35669387 215888510 91 130 579 25 18 25 23 39 0.7 0 117 0 0 117 6 10 127 8 8 25.31 60.5 39.5 4 2 4 Whitelist BRCA-US 10_13_17 0.62 0 0 0 0.77 1 Low confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA With other complex events 221 0.19 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 2 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 3 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 4 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 5 179530368 179549906 1 2 579 0 0 0 1 1 0.39 0.23 1 0 NA NA NA NA 6 4 6 25.31 1.37 98.51 0 2 NA Whitelist BRCA-US 0.68 0.46 0 NA 0.59 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 3 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 6 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 7 41114649 156524399 2 2 579 1 0 1 0 0 0.57 0 10 0 0 10 5 10 12 6 6 25.31 62.55 37.22 0 1 2 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 8 39166537 40860316 2 2 579 2 0 0 0 0 0.11 0.85 4 0 0 4 3 4 13 4 5 25.31 95.08 1.28 0 3 2 Whitelist BRCA-US 0.54 0.99 0 0 0.48 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 9 8650170 9003574 1 1 579 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 25.31 0.25 99.61 0 1 2 Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 10 109264246 123915303 17 22 579 2 3 5 7 5 0.32 0 16 0 0 16 8 14 28 8 12 25.31 45.8 50.69 0 1 3 Whitelist BRCA-US 1 0.62 0 0 0 0.59 1 High confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA With other complex events 39 0.03 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 11 76728327 84744117 6 16 579 1 1 3 1 10 0.57 0 18 0 0 18 5 8 31 6 9 25.31 47.75 48.44 5 1 4 Whitelist BRCA-US 22 0.68 0.01 0 0 0.64 1 Low confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA With other complex events 22 0.02 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 12 NA NA 0 0 579 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 13 20809449 38507871 15 28 579 3 2 6 4 13 0.51 0 32 0 0 32 6 11 56 8 8 25.31 85.91 14.09 0 4 1 Whitelist BRCA-US 17 0.62 0 0 0 0.64 1 Low confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA With other complex events 43 0.04 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 14 25881480 30045731 4 6 579 2 0 1 1 2 0.57 0.55 10 0 0 10 10 10 14 14 14 25.31 22.47 76.62 0 1 2 Whitelist BRCA-US 0.93 0.78 0 0 0.64 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 10 0.01 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 15 NA NA 0 0 579 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 16 NA NA 0 0 579 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.95 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 17 25885913 74155397 43 90 579 10 15 12 6 47 0.26 0 84 0 0 84 5 9 88 5 6 25.31 75.01 20.54 0 1 2 Whitelist BRCA-US 1_10_13 0.62 0 0 0 0.59 1 Low confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA With other complex events 133 0.11 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 18 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 19 NA NA 0 0 579 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 20 NA NA 0 0 579 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 21 NA NA 0 0 579 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a 22 22420637 33518317 6 20 579 3 1 1 1 14 0.57 0 10 0 0 10 8 10 12 9 9 25.31 98.13 1.87 0 1 4 Whitelist BRCA-US 11 0.54 0 0 0 0.64 1 High confidence BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA Before polyploidization 26 0.02 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::566792ae-f853-4a47-856d-f02cdcfcb18a X NA NA 0 0 579 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.98 0 NA NA 1 No BRCA-US 566792ae-f853-4a47-856d-f02cdcfcb18a BRCA 0.72 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2712 TCGA-A8-A07I 566792ae-f853-4a47-856d-f02cdcfcb18a female alive C50.9 69 NA 426 NA Included Breast-AdenoCA BRCA US 0 14.01 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 1 6551025 243490175 1 8 128 3 0 0 0 5 0.03 0.32 13 0 0 13 8 13 14 8 8 41.39 21.35 78.64 1 3 2 Whitelist BRCA-US 0.62 0.57 0 0 0.33 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 11 0.04 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 2 9203676 43702694 1 5 128 3 0 0 0 2 0.03 0.87 6 0 0 6 6 6 11 8 8 41.39 29.66 70.24 0 2 3 Whitelist BRCA-US 0.62 1 0 0 0.33 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 8 0.03 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 3 161087995 196182155 1 3 128 2 0 0 1 0 0.3 0.86 8 0 0 8 5 8 10 5 5 41.39 40.06 59.8 0 2 1 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 4 9555460 174187313 1 7 128 1 1 0 0 5 0.57 0.02 7 0 0 7 3 6 8 3 3 41.39 30.24 69.25 0 2 3 Whitelist BRCA-US 3 0.77 0.08 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 9 0.04 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 5 60336115 60366424 1 1 128 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 41.39 71.87 25.47 0 0 1 Whitelist BRCA-US 0.62 0.03 NA NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 6 28344073 28742847 1 1 128 1 0 0 0 0 0.39 0.71 2 0 NA NA NA NA 4 4 4 41.39 54.3 45.57 0 1 2 Whitelist BRCA-US 0.62 0.9 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 7 34111522 34125210 1 1 128 1 0 0 0 0 0.39 0.69 2 0 NA NA NA NA 5 5 5 41.39 35.66 64.11 0 1 2 Whitelist BRCA-US 0.62 0.89 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 8 29720238 113949407 1 4 128 1 1 0 0 2 0.57 0.54 6 0 0 6 3 4 11 7 8 41.39 48.64 47.93 0 2 4 Whitelist BRCA-US 0.54 0.77 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 6 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 9 21963413 106853678 1 2 128 1 1 0 0 0 0.57 1 5 0 0 5 3 5 7 4 4 41.39 27.74 71.56 0 2 0 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 10 62980267 124561586 2 3 128 0 0 1 1 1 0.57 0.2 2 0 0 NA NA NA 5 4 4 41.39 69.54 27.06 0 1 2 Whitelist BRCA-US 0.62 0.42 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 5 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 11 65725660 65744805 1 1 128 1 0 0 0 0 0.39 0.53 2 0 NA NA NA NA 5 5 5 41.39 0.02 99.42 0 1 2 Whitelist BRCA-US 0.62 0.76 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 12 46109441 115180434 1 6 128 3 0 0 0 3 0.03 0.05 7 0 0 7 6 7 8 6 6 41.39 50.47 49.45 0 1 2 Whitelist BRCA-US 0.54 0.17 0 0 0.33 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 9 0.04 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 13 57349882 57361453 1 1 128 1 0 0 0 0 0.39 0.81 2 0 NA NA NA NA NA NA NA 41.39 100 0 0 0 1 Whitelist BRCA-US 0.62 0.95 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 14 74005999 74017894 1 1 128 1 0 0 0 0 0.39 0.61 1 0 NA NA NA NA NA NA NA 41.39 99.09 0 0 1 NA Whitelist BRCA-US 0.62 0.82 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 15 85192857 85209183 1 1 128 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 41.39 48.03 51.88 0 2 NA Whitelist BRCA-US 0.62 0.02 0 NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 16 4379414 84279594 1 7 128 1 3 1 1 1 0.57 0.02 7 0 0 7 3 5 8 4 5 41.39 41.92 57.99 0 3 2 Whitelist BRCA-US 0.62 0.09 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 13 0.05 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 17 20826965 52615940 1 2 128 0 1 1 0 0 0.57 0.16 9 0 0 9 5 7 13 5 7 41.39 80.01 14.72 0 3 2 Whitelist BRCA-US 0.68 0.37 0 0 0.64 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 18 46598956 46903232 1 1 128 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 41.39 70.5 29.46 0 0 1 Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 19 42825937 48987191 1 2 128 2 0 0 0 0 0.11 0.04 4 0 0 4 4 4 7 5 5 41.39 58.51 41.07 0 1 2 Whitelist BRCA-US 0.54 0.14 0 0 0.48 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 20 NA NA 0 0 128 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.43 0 NA NA 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 21 NA NA 0 0 128 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 22 35093014 37863907 1 1 128 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 41.39 5.4 94.6 0 1 2 Whitelist BRCA-US 0.62 0.42 NA NA 0.59 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d1d00c6-fcae-479e-ae1e-de76efd41d98 X 105509204 115830602 1 2 128 2 0 0 0 0 0.11 0.31 3 0 0 NA NA NA 4 4 4 41.39 0.46 99.31 0 2 1 Whitelist BRCA-US 0.54 0.56 0 0 0.48 0 No BRCA-US 5d1d00c6-fcae-479e-ae1e-de76efd41d98 BRCA 0.55 1.83 Breast-AdenoCA NA 4 0.02 NA 2 BRCA-US DO3662 TCGA-BH-A0BW 5d1d00c6-fcae-479e-ae1e-de76efd41d98 female alive C50.9 71 NA 355 NA Included Breast-AdenoCA BRCA US 0 11.68 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 1 NA NA 0 0 52 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.19 0 NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 2 63486872 134319027 8 10 52 2 3 2 1 2 0.8 0 5 0 0 5 3 5 5 3 3 16.36 3.46 96.43 31 2 1 Whitelist BRCA-US 0.96 0.02 0 0 0.84 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 18 0.17 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 3 NA NA 0 0 52 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.51 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 4 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 5 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 6 NA NA 0 0 52 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.62 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 8 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 9 NA NA 0 0 52 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.9 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 10 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 11 67511149 70476235 10 17 52 2 3 2 3 7 0.94 0 2 0 0 NA NA NA 5 4 5 16.36 55.06 44.51 17 1 3 Whitelist BRCA-US 0.87 0 0 0 0.96 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 27 0.26 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 12 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 13 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 14 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 16 47859404 50228630 1 8 52 0 1 0 1 6 0.57 0 8 0 0 8 4 4 12 4 4 16.36 59.82 35.74 14 4 7 Whitelist BRCA-US 0.62 0 0 0 0.64 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 10 0.1 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 17 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 19 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5d8ed961-a012-4b6b-bffb-9468d3953646 X NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 5d8ed961-a012-4b6b-bffb-9468d3953646 BRCA 0.63 2.06 Breast-LobularCA NA 0 0 NA 2 BRCA-US DO6144 TCGA-EW-A1J5 5d8ed961-a012-4b6b-bffb-9468d3953646 female alive C50.9 59 NA 227 NA Included Breast-LobularCA BRCA US 0 7.47 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 1 150805216 169752869 16 22 255 4 2 5 5 6 0.68 0 33 0 0 33 4 6 58 10 15 36.4 64.52 35.48 10 7 4 Whitelist BRCA-US 0.89 0 0 0 0.76 1 Low confidence BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA With other complex events 38 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 2 27552862 48872912 2 2 255 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 36.4 0.07 99.84 0 2 NA Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 3 48190231 48353385 2 2 255 0 2 0 0 0 0.11 0.27 1 0 0 NA NA NA 9 9 9 36.4 0.34 99.54 0 2 NA Whitelist BRCA-US 0.54 0.51 0 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 4 19691773 57651659 1 2 255 0 2 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 36.4 80.34 17.3 0 1 2 Whitelist BRCA-US 0.54 0 NA 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 5 79921523 179871607 1 2 255 0 1 0 1 0 0.57 0 4 0 0 4 3 4 7 3 3 36.4 47.86 49.47 0 2 1 Whitelist BRCA-US 0.68 0.01 0 0 0.64 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 6 1919001 110928833 2 4 255 0 2 0 0 2 0.11 0.06 7 0.01 0 7 3 7 8 3 7 36.4 1.38 98.48 0 2 3 Whitelist BRCA-US 0.68 0.19 0.01 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 7 65450386 104629194 1 4 255 0 4 0 0 0 0.01 0 13 0 0 13 4 5 15 4 6 36.4 2.58 97.19 0 2 3 Whitelist BRCA-US 0.21 0.02 0 0 0.16 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 8 128590532 128870312 9 12 255 0 4 3 2 3 0.27 0 8 0 0 8 0 3 37 4 5 36.4 96.48 0.07 0 6 13 Whitelist BRCA-US 0.62 0 0 0 0.59 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 21 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 9 125987528 140416554 1 8 255 0 2 0 0 6 0.11 0.87 2 0 0 NA NA NA NA NA NA 36.4 0.66 99.19 0 2 3 Whitelist BRCA-US X 0.68 1 0 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 10 68422126 88297594 27 28 255 8 5 7 7 1 0.87 0 25 0 0 25 4 11 30 5 11 36.4 32.76 67.06 0 3 4 Whitelist BRCA-US 0.87 0 0 0 0.91 1 Low confidence BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA With other complex events 55 0.11 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 11 659893 65425417 2 8 255 0 3 1 0 4 0.11 0.02 13 0 0 13 7 7 21 8 8 36.4 2.04 97.54 0 3 2 Whitelist BRCA-US 0.28 0.09 0 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 12 9285340 132408504 1 11 255 0 5 0 0 6 0 1 10 0 0 10 7 10 11 7 7 36.4 9.46 86.8 0 2 3 Whitelist BRCA-US 0.34 1 0 0 0.07 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 13 NA NA 0 0 255 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 14 56022801 105584122 1 9 255 1 5 0 0 3 0.01 0.47 10 0 0 10 4 9 11 4 4 36.4 66.63 32.45 0 2 1 Whitelist BRCA-US 0.48 0.71 0 0 0.19 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 15 49154274 91409356 1 5 255 0 3 0 0 2 0.03 0.7 7 0 0 7 5 7 8 5 5 36.4 66.52 33.39 0 2 3 Whitelist BRCA-US 17 0.62 0.9 0 0 0.33 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 16 732837 88811031 1 7 255 1 6 0 0 0 0 0.85 9 0 0 9 4 7 9 4 4 36.4 0.59 99.32 0 2 3 Whitelist BRCA-US 0.13 0.98 0.01 0 0.09 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 17 7681345 46212291 1 9 255 0 6 0 0 3 0 0.08 11 0 0 11 6 11 13 8 8 36.4 23.92 75.26 0 3 2 Whitelist BRCA-US 0.15 0.22 0 0 0.03 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 18 1877119 1987923 1 4 255 0 1 0 1 2 0.57 0.85 1 0 0 NA NA NA 6 3 3 36.4 19.51 75.67 0 5 NA Whitelist BRCA-US 0.68 0.98 0 0 0.64 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 19 12777809 50089120 1 14 255 0 6 0 0 8 0 0 13 0 0 13 3 4 15 3 3 36.4 60.76 31.96 0 5 1 Whitelist BRCA-US 11 0.01 0 0 0 0.03 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 20 3648877 35357784 3 3 255 0 1 1 1 0 0.8 0.01 2 0 0 NA NA NA 7 7 7 36.4 99 0 0 3 4 Whitelist BRCA-US 0.87 0.06 0 0 0.84 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 21 17776708 25908658 1 2 255 2 0 0 0 0 0.11 1 5 0 0 5 4 5 7 4 5 36.4 67.48 2.34 2 2 4 Whitelist BRCA-US 0.54 1 0 0 0.48 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c 22 50278904 50568039 2 2 255 0 1 1 0 0 0.57 0.01 1 0 0 NA NA NA 15 8 8 36.4 8.92 89.64 0 2 NA Whitelist BRCA-US 0.68 0.05 0 0 0.64 1 No BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5dd423e8-feaa-4568-a750-500948c41d6c X 133728817 149525449 10 10 255 3 3 2 2 0 0.94 0 17 0 0 17 10 17 45 11 20 36.4 68.49 31.28 6 2 3 Whitelist BRCA-US 0.96 0 0 0 0.96 1 High confidence BRCA-US 5dd423e8-feaa-4568-a750-500948c41d6c BRCA 0.8 2.15 Breast-AdenoCA With other complex events 20 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 BRCA-US DO4138 TCGA-B6-A0I1 5dd423e8-feaa-4568-a750-500948c41d6c female deceased C50.9 73 2361 NA NA Included Breast-AdenoCA BRCA US 1 77.66 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 1 96603812 211368217 4 4 475 0 2 1 1 0 0.57 0.35 33 0 0 33 6 13 58 15 15 46.38 46.3 53.7 0 3 4 Whitelist BRCA-US 0.68 0.6 0 0 0.64 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 2 2340260 239159179 1 27 475 0 26 0 0 1 0 0.12 47 0 0 47 14 24 48 14 24 46.38 23.53 76.39 0 2 3 Whitelist BRCA-US 0 0.3 0 0 0 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 53 0.06 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 3 72656484 76234754 2 2 475 0 2 0 0 0 0.11 0.37 4 0 0 4 3 4 57 15 15 46.38 40.47 56.47 0 3 2 Whitelist BRCA-US 0.54 0.62 0 0 0.48 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 4 535814 108696900 4 5 475 0 2 1 1 1 0.57 0.08 21 0 0 21 7 21 36 8 8 46.38 75.95 23.95 0 2 1 Whitelist BRCA-US 0.68 0.23 0 0 0.64 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 5 3827801 176614919 1 20 475 1 17 0 0 2 0 0.07 39 0 0 39 28 39 40 28 28 46.38 75.47 21.86 1 2 1 Whitelist BRCA-US 0 0.21 0 0 0 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 38 0.04 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 6 51138158 130462845 2 6 475 0 2 1 1 2 0.57 0.92 22 0 0 22 19 20 44 23 23 46.38 24.42 75.32 0 2 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 7 126371511 130257808 3 6 475 1 2 0 0 3 0.3 0.26 10 0 0 10 4 9 45 18 34 46.38 30.62 69.16 0 3 2 Whitelist BRCA-US 0.93 0.5 0 0 0.59 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 8 105324230 137959409 3 3 475 0 1 1 1 0 0.8 0.4 20 0 0 20 6 7 46 9 9 46.38 96.02 0.05 0 3 4 Whitelist BRCA-US 0.87 0.65 0 0 0.84 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 9 66454886 110368911 6 7 475 2 1 2 1 1 0.88 0.23 14 0 0 14 8 8 24 14 14 46.38 73.72 26.15 0 2 1 Whitelist BRCA-US 0.77 0.47 0 0 0.91 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 False positive; manually removed BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 10 119963813 123303132 2 2 475 0 2 0 0 0 0.11 1 4 0 0 4 0 3 37 9 21 46.38 31.06 64.94 0 2 4 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 11 34123374 49526843 7 8 475 2 5 0 0 1 0.02 0 23 0 0 23 4 5 63 12 12 46.38 96.91 2.66 0 4 5 Whitelist BRCA-US 0.21 0 0 0 0.33 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 12 1602975 124219176 1 15 475 2 12 1 0 0 0 0.45 21 0 0 21 11 21 21 11 11 46.38 3.16 96.76 0 2 3 Whitelist BRCA-US 0.01 0.69 0 0 0 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 30 0.03 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 13 27374782 90659951 15 15 475 3 3 4 5 0 0.87 0.01 14 0 0 14 5 5 25 5 9 46.38 44.49 55.51 0 2 1 Whitelist BRCA-US 0.93 0.04 0 0 0.9 0 Low confidence BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA With other complex events 30 0.03 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 14 32732923 74134194 1 5 475 0 5 0 0 0 0 0.02 8 0 0 8 8 8 9 9 9 46.38 97.8 1.29 0 1 2 Whitelist BRCA-US 0.1 0.07 0 0 0.07 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 15 43723632 62360621 11 11 475 2 7 0 2 0 0.02 0 12 0 0 12 5 5 53 11 11 46.38 66.4 28.72 7 2 1 Whitelist BRCA-US 0.41 0 0 0 0.33 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 22 0.02 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 16 421761 85786009 1 15 475 0 14 0 0 1 0 0.32 17 0 0 17 17 17 17 17 17 46.38 4.02 95.97 0 2 3 Whitelist BRCA-US 0 0.57 0 0 0 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 29 0.03 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 17 26864514 75974296 1 12 475 0 9 0 1 2 0 1 20 0 0 20 7 11 21 7 8 46.38 63.96 35.62 0 2 4 Whitelist BRCA-US 0.01 1 0 0 0.01 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 22 0.02 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 18 30117660 30253119 2 2 475 0 2 0 0 0 0.11 0.78 3 0 0 NA NA NA 18 9 11 46.38 6.62 93.34 0 2 3 Whitelist BRCA-US 0.54 0.93 0 0 0.48 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 19 998026 47861482 1 15 475 0 9 1 0 5 0 0.01 21 0 0 21 8 15 22 8 8 46.38 39.69 53.03 0 2 3 Whitelist BRCA-US 0.04 0.05 0 0 0.01 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 25 0.03 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 20 25612239 58105683 1 7 475 1 6 0 0 0 0 0.43 11 0 0 11 7 11 11 7 7 46.38 98.74 0.29 0 3 4 Whitelist BRCA-US 0.13 0.68 0 0 0.09 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 21 24778158 39822764 1 7 475 0 7 0 0 0 0 0.53 3 0 0 NA NA NA 5 3 3 46.38 9.67 67.68 0 2 3 Whitelist BRCA-US 0.02 0.76 0 0 0.01 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 22 19075891 48921485 1 4 475 0 4 0 0 0 0.01 0.67 8 0 0 8 8 8 9 9 9 46.38 1.23 98.77 0 2 3 Whitelist BRCA-US 0.21 0.87 0 0 0.16 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5ed024e8-d05e-4c65-9441-eda9930ccc82 X 149697583 150167411 2 3 475 1 0 1 0 1 0.57 0.4 6 0 0 6 0 4 48 15 18 46.38 20.74 75.31 0 2 1 Whitelist BRCA-US 0.87 0.65 0 0 0.64 0 No BRCA-US 5ed024e8-d05e-4c65-9441-eda9930ccc82 BRCA 0.38 2.04 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578191_G_A,CN:1 2 BRCA-US DO4359 TCGA-A7-A26G 5ed024e8-d05e-4c65-9441-eda9930ccc82 female alive C50.9 50 NA 210 NA Included Breast-AdenoCA BRCA US 0 6.91 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 1 28931479 239906546 1 11 97 4 1 1 1 4 0.28 0 15 0 0 15 4 4 16 5 7 53.25 55.47 41.26 4 2 1 Whitelist BRCA-US 0.41 0.01 0 0 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 18 0.09 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 2 190598050 190659625 1 1 97 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA 5 3 3 53.25 76.16 23.73 0 0 1 Whitelist BRCA-US 0.62 0.2 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 3 47666958 170232692 1 2 97 2 0 0 0 0 0.11 0.07 4 NA 0 4 4 4 5 5 5 53.25 0.13 99.73 1 1 2 Whitelist BRCA-US 0.54 0.21 NA 0 0.48 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 4 1009202 1821701 1 1 97 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 53.25 99.55 0.43 0 1 2 Whitelist BRCA-US 0.62 0.45 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 5 179056652 179132780 1 1 97 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 5 4 5 53.25 91.17 6.16 0 1 2 Whitelist BRCA-US 0.62 0.97 0 NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 6 27642577 84092516 10 11 97 3 3 3 1 1 0.75 0 22 0 0 22 17 19 31 18 24 53.25 22.19 77.68 0 2 3 Whitelist BRCA-US 0.74 0 0 0 0.83 1 High confidence BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA Canonical without polyploidization 21 0.11 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 7 NA NA 0 0 97 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 8 48814852 48833950 2 2 97 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 12 5 7 53.25 83.64 12.02 0 2 3 Whitelist BRCA-US 0.68 0.02 0 0 0.64 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 9 84866536 84959478 2 2 97 0 0 1 1 0 0.57 0.28 1 0 0 NA NA NA 7 4 4 53.25 85.53 14.12 0 1 NA Whitelist BRCA-US 0.68 0.53 0 0 0.64 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 10 44463235 89722444 1 2 97 1 0 1 0 0 0.57 1 4 0.01 0 4 3 4 9 3 3 53.25 95.03 1.53 0 1 0 Whitelist BRCA-US 0.68 1 0.01 0 0.64 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 11 547697 81527138 1 4 97 2 2 0 0 0 0.26 1 6 0 0 6 4 6 8 6 6 53.25 0.66 98.92 0 2 1 Whitelist BRCA-US 0.62 1 0 0 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 8 0.04 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 12 11864954 12212247 1 1 97 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 53.25 0.26 99.66 0 2 4 Whitelist BRCA-US 0.62 0.26 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 13 94185738 105897440 3 3 97 1 2 0 0 0 0.3 0.15 6 0 0 6 6 6 8 7 7 53.25 80.79 19.21 0 2 3 Whitelist BRCA-US 0.62 0.35 0 0 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 6 0.03 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 14 NA NA 0 0 97 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 15 72206042 72469571 1 1 97 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 53.25 88.77 11.13 0 0 1 Whitelist BRCA-US 0.62 1 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 16 2140768 10864904 1 2 97 2 0 0 0 0 0.11 0.75 4 NA 0 4 4 4 7 7 7 53.25 33.26 62.21 0 1 2 Whitelist BRCA-US 0.54 0.91 NA 0 0.48 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 17 NA NA 0 0 97 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.92 NA NA NA 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 18 43283800 58526947 1 3 97 0 1 0 1 1 0.57 0.05 4 0 0 4 3 4 6 4 4 53.25 14.73 85.23 0 3 2 Whitelist BRCA-US 0.62 0.16 0 0 0.64 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 5 0.03 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 19 1150605 1249427 1 1 97 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 5 5 53.25 2.44 97.37 0 1 2 Whitelist BRCA-US 0.62 0.69 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 20 47702808 47983449 1 1 97 0 1 0 0 0 0.39 0.16 2 0 NA NA NA NA 7 3 3 53.25 57.73 41.51 0 3 5 Whitelist BRCA-US 0.62 0.36 0 NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 21 45364816 45454779 1 2 97 0 1 0 1 0 0.57 0.33 1 NA 0 NA NA NA NA NA NA 53.25 0 70.29 0 2 NA Whitelist BRCA-US 0.68 0.58 NA 0 0.64 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 4 0.02 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 22 50714668 50939061 1 1 97 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 53.25 0.44 98.85 0 0 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 2 0.01 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::5fd9552a-c742-4388-940d-295d1107ae00 X NA NA 0 0 97 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.26 NA NA NA 1 No BRCA-US 5fd9552a-c742-4388-940d-295d1107ae00 BRCA 0.78 1.75 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579321_-_CA,CN:1 2 BRCA-US DO2509 TCGA-AR-A1AY 5fd9552a-c742-4388-940d-295d1107ae00 female alive C50.9 65 NA 615 NA Included Breast-AdenoCA BRCA US 0 20.23 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 1 180649757 180742390 1 1 156 1 0 0 0 0 0.39 0.24 2 0 NA NA NA NA 9 3 7 82.72 100 0 0 4 6 Whitelist BRCA-US 0.62 0.47 0 NA 0.59 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 2 103684535 103728868 2 2 156 0 0 0 2 0 0.11 0.47 4 0 0 4 0 4 15 3 3 82.72 43.02 56.89 0 6 9 Whitelist BRCA-US 0.54 0.71 0 0 0.48 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 3 52349751 136304235 1 4 156 1 1 0 0 2 0.57 0.03 4 0 0 4 3 4 5 3 3 82.72 99.77 0.2 1 3 2 Whitelist BRCA-US 0.68 0.1 0 0 0.64 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 4 186530801 186620440 2 2 156 0 0 1 1 0 0.57 0.2 5 0 0 5 5 5 5 5 5 82.72 99.94 0.03 0 3 2 Whitelist BRCA-US 0.68 0.42 0 0 0.64 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 5 37049904 58712642 1 2 156 2 0 0 0 0 0.11 0.07 4 0 0 4 4 4 5 5 5 82.72 99.64 0.24 0 2 3 Whitelist BRCA-US 0.54 0.2 0 0 0.48 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 6 15744926 16226211 1 1 156 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 82.72 99.83 0 0 6 NA Whitelist BRCA-US 0.62 0.01 NA NA 0.59 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 7 87899365 139556334 1 3 156 2 1 0 0 0 0.3 0.29 4 0 0 4 3 4 9 5 5 82.72 99.92 0.05 0 3 2 Whitelist BRCA-US 0.62 0.53 0 0 0.59 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 8 38109487 141109862 66 77 156 11 15 22 18 11 0.27 0 106 0 0 106 4 5 117 4 5 82.72 96.45 0 16 6 12 Whitelist BRCA-US 0.62 0 0 0 0.59 0 Low confidence BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA With other complex events 143 0.46 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 9 7101017 102960994 18 20 156 4 6 3 5 2 0.77 0 10 0 0 10 4 8 14 5 5 82.72 33.1 66.86 0 4 2 Whitelist BRCA-US 0.68 0 0 0 0.84 0 Low confidence BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA With other complex events 38 0.12 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 10 7936324 125139534 1 2 156 1 1 0 0 0 0.57 0.13 2 0.04 0.04 NA NA NA NA NA NA 82.72 74.48 22.18 0 2 3 Whitelist BRCA-US 0.68 0.32 0.04 0.04 0.64 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 11 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 12 NA NA 0 0 156 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.05 NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 13 43642172 59301776 1 3 156 2 0 0 0 1 0.11 0.38 5 NA 0 5 4 5 6 4 4 82.72 96.37 3.63 0 1 2 Whitelist BRCA-US 0.62 0.63 NA 0 0.48 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 5 0.02 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 14 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 15 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 16 89419694 89486879 1 1 156 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 82.72 98.95 0 0 0 NA Whitelist BRCA-US 0.62 0.7 NA NA 0.59 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 17 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 18 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 19 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 20 NA NA 0 0 156 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.51 NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 21 23721692 23742989 1 1 156 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 16 3 4 82.72 77.76 0 7 0 14 Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 22 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::60df7543-6da5-4c75-943b-5800c1e08234 X NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 60df7543-6da5-4c75-943b-5800c1e08234 BRCA 0.39 3.73 Breast-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 BRCA-US DO3874 TCGA-E2-A14X 60df7543-6da5-4c75-943b-5800c1e08234 female alive C50.9 55 NA 692 NA Included Breast-AdenoCA BRCA US 0 22.76 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 1 149881190 243814704 3 26 909 1 0 0 2 23 0.3 0 36 0 0 36 7 12 51 11 12 36.55 34.57 65.43 0 3 2 Whitelist BRCA-US 13_4_7_9_X 0.62 0 0 0 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 29 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 False positive; manually removed BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 2 10252979 231781039 1 64 909 6 10 1 2 45 0.01 0 38 0 0 38 7 23 41 8 10 36.55 8.87 91.04 0 2 3 Whitelist BRCA-US 1_14_15_17_19_4_7_9 0.71 0 0 0 0.24 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 83 0.05 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 3 39702805 190330615 7 42 909 3 1 2 1 35 0.67 0 40 0 0 40 7 10 61 11 12 36.55 52.05 47.84 0 2 3 Whitelist BRCA-US 15_4_8_9_X 1 0 0 0 0.74 0 High confidence BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA With other complex events 49 0.03 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 4 36731786 170830420 1 41 909 3 6 0 0 32 0.01 0.29 28 0 0 28 9 11 31 9 11 36.55 40.26 59.71 0 2 3 Whitelist BRCA-US 1_2_3_7_8_9 0.62 0.53 0 0 0.21 0 Linked to high confidence BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA With other complex events 50 0.03 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 5 50007495 90666825 3 6 909 1 2 0 0 3 0.3 0.78 8 0 0 8 4 8 37 7 11 36.55 51.59 48.27 0 2 1 Whitelist BRCA-US 15 0.62 0.94 0 0 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 9 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 6 1730813 139089485 5 27 909 2 1 1 1 22 0.9 0.53 21 0 0 21 13 19 29 16 16 36.55 31.78 67.98 0 2 1 Whitelist BRCA-US 1_15_8 0.93 0.76 0 0 0.92 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 32 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 False positive; manually removed BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 7 95697844 156942103 4 11 909 1 1 1 1 7 1 0 18 0 0 18 7 10 42 15 17 36.55 48.81 50.97 0 3 2 Whitelist BRCA-US 1_15 0.62 0.01 0 0 1 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 15 0.01 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 False positive; manually removed BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 8 22900664 128813814 1 29 909 1 3 0 0 25 0.11 0.04 29 0 0 29 13 29 37 21 21 36.55 93.03 6.5 6 3 4 Whitelist BRCA-US 14_17_19_4 0.62 0.14 0 0 0.48 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 33 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 9 31378526 139868176 1 18 909 1 7 0 0 10 0 0.03 21 0 0 21 13 17 24 16 16 36.55 2.04 97.25 0 2 3 Whitelist BRCA-US 1_2 0.16 0.1 0 0 0.04 0 Linked to high confidence BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA Canonical without polyploidization 26 0.01 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 10 4218162 22552918 2 2 909 0 0 1 1 0 0.57 0.63 9 0 0 9 4 7 26 6 10 36.55 61.2 38.63 0 2 3 Whitelist BRCA-US 0.68 0.85 0 0 0.64 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 11 21592391 23640257 2 2 909 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 18 5 6 36.55 43.03 56.55 0 2 NA Whitelist BRCA-US 0.68 0.01 0 0 0.64 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 12 12002725 12212159 3 3 909 0 2 1 0 0 0.3 0.06 7 0 0 7 3 5 28 16 18 36.55 43.12 56.8 0 5 6 Whitelist BRCA-US 0.62 0.18 0 0 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 6 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 13 20691358 100667837 1 21 909 3 2 1 1 14 0.67 1 12 0 0 12 7 9 12 7 7 36.55 44.52 55.48 0 2 1 Whitelist BRCA-US 1_17 0.84 1 0 0 0.74 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 28 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 14 36050123 100826099 1 11 909 2 4 0 0 5 0.06 0.45 8 0 0 8 7 8 13 7 7 36.55 75.17 23.92 0 1 2 Whitelist BRCA-US 0.62 0.69 0 0 0.48 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 17 0.01 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 15 38084470 80918008 1 18 909 0 4 0 0 14 0.01 0.03 11 0 0 11 6 11 12 6 7 36.55 75.89 19.23 0 1 2 Whitelist BRCA-US 14_2_6_7 0.62 0.12 0 0 0.16 0 Linked to high confidence BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA With other complex events 22 0.01 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 16 30557322 57538252 1 5 909 1 1 1 0 2 0.8 0.12 3 0 0 NA NA NA 7 6 6 36.55 12.85 86.15 0 2 1 Whitelist BRCA-US 2 0.93 0.31 0 0 0.84 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 8 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 17 35339299 80044376 1 22 909 0 6 0 0 16 0 0 27 0 0 27 5 12 30 6 7 36.55 48.04 51.96 0 2 3 Whitelist BRCA-US 1_13_7 0.28 0 0 0 0.03 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 28 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 18 4168838 11467992 1 5 909 1 2 0 0 2 0.3 0.68 5 0 0 5 5 5 14 10 10 36.55 8.56 91.4 0 2 3 Whitelist BRCA-US X 0.93 0.88 0 0 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 8 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 19 663441 49460784 1 22 909 2 4 1 0 15 0.17 0 12 0 0 12 5 12 14 5 5 36.55 10.18 89.65 0 2 3 Whitelist BRCA-US 1_2_8 0.21 0 0 0 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 29 0.02 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 20 13856946 13911658 1 1 909 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA 7 3 3 36.55 1.47 90.21 0 2 NA Whitelist BRCA-US 0.62 0.07 0 NA 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 21 21582208 21620836 1 1 909 0 1 0 0 0 0.39 0.76 1 0 NA NA NA NA 7 5 5 36.55 0.38 69.91 0 2 NA Whitelist BRCA-US 0.62 0.93 0 NA 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 22 30767675 30779478 1 1 909 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 17 5 7 36.55 21.2 77.36 0 3 NA Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::65cac997-4d39-4501-85ec-4fcb328a8eb5 X 9604512 99744774 1 17 909 1 4 0 0 12 0.04 0.17 19 0 0 19 5 9 28 7 9 36.55 6.94 92.83 0 2 1 Whitelist BRCA-US 1_18_7 0.68 0.39 0 0 0.36 0 No BRCA-US 65cac997-4d39-4501-85ec-4fcb328a8eb5 BRCA 0.66 1.85 Breast-AdenoCA NA 22 0.01 NA 2 BRCA-US DO44111 TCGA-GM-A3XL 65cac997-4d39-4501-85ec-4fcb328a8eb5 female alive C50.9 49 NA 1717 NA Included Breast-AdenoCA BRCA US 0 56.48 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 1 17352815 234348256 1 14 227 2 5 0 0 7 0.02 0 8 0 0 8 4 6 9 4 6 46.22 20.85 79.15 0 2 3 Whitelist BRCA-US 8 0.49 0.02 0 0 0.33 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 21 0.05 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 2 136473430 137542643 1 2 227 0 2 0 0 0 0.11 0.03 4 0 0 4 3 4 12 4 8 46.22 66.03 33.87 0 1 2 Whitelist BRCA-US 0.54 0.11 0 0 0.48 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 3 52550750 110768257 1 6 227 0 4 0 0 2 0.01 0.07 1 0 0 NA NA NA 4 3 3 46.22 0.68 99.2 0 2 NA Whitelist BRCA-US 0.54 0.21 0 0 0.16 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 10 0.02 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 4 NA NA 0 0 227 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 0 NA NA 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 5 14426753 156908648 1 6 227 0 3 0 0 3 0.03 0.78 5 0 0 5 3 3 6 3 4 46.22 86.3 13.57 0 2 3 Whitelist BRCA-US 0.54 0.94 0 0 0.33 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 9 0.02 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 6 37476301 41341594 1 1 227 1 0 0 0 0 0.39 0.67 1 0 NA NA NA NA 7 3 5 46.22 56.6 40.47 0 2 NA Whitelist BRCA-US 0.62 0.88 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 7 11919098 43525639 1 1 227 1 0 0 0 0 0.39 0.04 4 0 NA 4 4 4 9 5 5 46.22 19.27 80.5 0 1 2 Whitelist BRCA-US 0.62 0.13 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 8 127655333 142568575 6 6 227 1 2 1 2 0 0.88 0 6 0 0 6 4 6 21 6 13 46.22 71.29 28.46 1 3 4 Whitelist BRCA-US 0.93 0 0 0 0.91 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 12 0.03 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 9 11692405 37537655 1 4 227 0 3 0 0 1 0.03 0.06 1 0 0 NA NA NA 4 0 4 46.22 7.47 91.83 0 2 NA Whitelist BRCA-US 0.54 0.18 0 0 0.33 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 7 0.02 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 10 89675364 89733605 1 1 227 1 0 0 0 0 0.39 0.53 2 0 NA NA NA NA 4 3 3 46.22 92.61 7.21 0 0 1 Whitelist BRCA-US 0.62 0.76 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 11 46016453 75358828 1 3 227 0 3 0 0 0 0.03 0.75 2 0 0 NA NA NA 5 3 3 46.22 56.95 42.62 0 1 2 Whitelist BRCA-US 0.41 0.92 0 0 0.33 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 6 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 12 103784395 124928722 1 2 227 1 1 0 0 0 0.57 0.43 8 0 0 8 6 8 13 11 11 46.22 99.81 0.03 0 1 2 Whitelist BRCA-US 0.68 0.68 0 0 0.64 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 13 48903024 48926670 1 1 227 0 1 0 0 0 0.39 0.2 1 0 NA NA NA NA NA NA NA 46.22 78.19 21.81 0 1 NA Whitelist BRCA-US 0.62 0.43 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 14 50303298 50318309 1 1 227 0 1 0 0 0 0.39 0.25 1 0 NA NA NA NA 5 3 3 46.22 1.19 95.1 0 2 NA Whitelist BRCA-US 0.62 0.49 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 15 88993624 89005414 1 1 227 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 4 4 4 46.22 78.97 21.03 0 1 NA Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 16 53342317 53358759 1 1 227 0 1 0 0 0 0.39 0.41 2 0 NA NA NA NA 7 7 7 46.22 0.03 99.87 0 2 4 Whitelist BRCA-US 0.62 0.65 0 NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 17 NA NA 0 0 227 0 0 0 0 0 NA 0.84 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.97 0 NA NA 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 18 41522127 55087779 1 4 227 1 0 0 0 3 0.39 0.01 3 0 0 NA NA NA 9 4 5 46.22 32.03 67.94 0 1 2 Whitelist BRCA-US 0.68 0.03 0 0 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 5 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 19 NA NA 0 0 227 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.46 0 NA NA 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 20 NA NA 0 0 227 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 0 NA NA 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 21 43465390 43479154 1 1 227 0 1 0 0 0 0.39 0.76 1 NA NA NA NA NA NA NA NA 46.22 2.1 68.19 0 2 NA Whitelist BRCA-US 0.62 0.92 NA NA 0.59 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 2 0 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 22 41442678 47363319 1 2 227 0 2 0 0 0 0.11 0.35 3 0 0 NA NA NA 4 0 0 46.22 7.77 92.23 0 2 4 Whitelist BRCA-US 0.54 0.6 0 0 0.48 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6956473b-92e5-4069-a26b-b48e280e76f2 X 53838188 110084453 1 4 227 0 2 0 0 2 0.11 0.55 3 0 0 NA NA NA 5 3 3 46.22 22.28 77.49 0 2 3 Whitelist BRCA-US 0.54 0.77 0 0 0.48 0 No BRCA-US 6956473b-92e5-4069-a26b-b48e280e76f2 BRCA 0.56 1.61 Breast-AdenoCA NA 6 0.01 stopgain,17_7578263_A_G,CN:1 1 BRCA-US DO1954 TCGA-B6-A0RU 6956473b-92e5-4069-a26b-b48e280e76f2 female alive C50.9 40 NA 7067 NA Included Breast-AdenoCA BRCA US 0 232.47 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 1 94274301 226426398 10 18 259 2 2 4 2 8 0.75 0 42 0 0 42 4 6 51 4 8 68.36 96.19 0.21 2 9 7 Whitelist BRCA-US 0.62 0 0 0 0.83 1 Low confidence BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA With other complex events 28 0.05 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 2 32244075 236565934 1 12 259 9 1 0 0 2 0 0.5 20 0 0 20 6 12 22 6 6 68.36 97.32 0 1 4 3 Whitelist BRCA-US 0.01 0.74 0 0 0.01 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 3 85642374 136466786 4 8 259 5 2 0 1 0 0.07 0.33 17 0 0 17 3 9 27 7 7 68.36 54.49 42.36 0 4 3 Whitelist BRCA-US 0.54 0.58 0 0 0.48 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 4 2490284 102263562 1 9 259 7 0 0 0 2 0 0.21 6 0 0 6 3 5 7 3 5 68.36 21.79 78.03 0 2 4 Whitelist BRCA-US 0.02 0.44 0 0 0.01 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 5 12025929 127289328 1 8 259 7 1 0 0 0 0 0.7 17 0 0 17 5 11 20 5 9 68.36 25.91 71.42 0 2 1 Whitelist BRCA-US 0.06 0.9 0 0 0.04 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 6 65582107 163947618 3 8 259 3 2 0 1 2 0.34 0.51 14 0 0 14 5 7 26 8 8 68.36 66.79 29.95 0 2 4 Whitelist BRCA-US 0.68 0.75 0 0 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 7 148410805 148571217 4 8 259 3 0 1 0 4 0.11 0.41 6 0 0 6 4 6 19 6 6 68.36 99.73 0.04 0 2 3 Whitelist BRCA-US 13_22 0.41 0.65 0 0 0.48 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 8 3808642 141636398 1 7 259 3 1 0 1 2 0.28 0.57 12 0 0 12 3 4 13 3 3 68.36 96.55 0.03 5 6 4 Whitelist BRCA-US 0.68 0.8 0 0 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 9 74395243 103191415 1 4 259 4 0 0 0 0 0.01 0.26 6 0 0 6 3 6 9 3 7 68.36 99.28 0.02 0 4 3 Whitelist BRCA-US 0.21 0.5 0 0 0.16 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 10 34570369 129918741 1 5 259 4 0 0 0 1 0.01 0.04 9 0 0 9 4 8 10 4 4 68.36 99.79 0.04 0 3 4 Whitelist BRCA-US 0.45 0.13 0 0 0.16 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 11 34096812 49473079 2 3 259 1 1 0 0 1 0.57 0.55 12 0 0 12 4 4 23 5 5 68.36 42.14 57.29 1 2 12 Whitelist BRCA-US 0.62 0.78 0 0 0.64 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 12 34301684 129538251 1 4 259 2 0 0 0 2 0.11 0.01 1 NA 0 NA NA NA NA NA NA 68.36 99.92 0 0 4 NA Whitelist BRCA-US 0.68 0.05 NA 0 0.48 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 13 33167729 114524122 1 14 259 3 1 0 0 10 0.11 0 8 0 0 8 6 8 9 6 8 68.36 52.58 47.25 0 2 3 Whitelist BRCA-US 0.68 0.02 0 0 0.48 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 14 45581912 97296861 1 3 259 2 1 0 0 0 0.3 0.21 6 0 0 6 3 6 8 4 4 68.36 81.65 3.22 0 3 2 Whitelist BRCA-US 0.62 0.43 0 0 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 15 NA NA 0 0 259 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 16 89403650 89538179 1 1 259 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA 7 3 3 68.36 52.63 46.42 0 2 NA Whitelist BRCA-US 0.62 0.39 NA NA 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 17 36487259 45849232 1 5 259 2 1 0 0 2 0.3 1 5 0 0 5 0 3 10 3 3 68.36 92.84 2.15 1 3 1 Whitelist BRCA-US 0.62 1 0 0 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 18 48572299 64589345 1 3 259 3 0 0 0 0 0.03 0.34 2 0 0 NA NA NA 7 3 3 68.36 95.35 0 0 3 4 Whitelist BRCA-US 0.41 0.59 0 0 0.33 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 19 7866667 39524085 9 9 259 2 1 2 4 0 0.55 0 34 0 0 34 11 14 39 11 11 68.36 82.53 9.87 1 4 6 Whitelist BRCA-US 0.68 0 0 0 0.64 1 High confidence BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 20 19514571 46157270 1 2 259 1 1 0 0 0 0.57 0.39 2 0 0 NA NA NA NA NA NA 68.36 99 0 0 3 4 Whitelist BRCA-US 0.68 0.63 0 0 0.64 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 21 27412502 38802947 1 5 259 4 1 0 0 0 0.04 0.25 8 0 0 8 4 8 9 5 5 68.36 77.35 0 0 4 3 Whitelist BRCA-US 0.45 0.5 0 0 0.36 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 22 48355192 49328608 2 7 259 0 2 0 0 5 0.11 0 6 0 0 6 6 6 13 9 9 68.36 87.43 0 0 4 5 Whitelist BRCA-US 13 0.77 0 0 0 0.48 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::6fa2a667-9c36-4526-8a58-1975e863a806 X 20504743 77014843 1 3 259 2 0 1 0 0 0.3 0.16 10 0 0 10 3 4 24 5 9 68.36 32.54 64.07 1 2 1 Whitelist BRCA-US 0.62 0.36 0 0 0.59 1 No BRCA-US 6fa2a667-9c36-4526-8a58-1975e863a806 BRCA 0.88 3.98 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 BRCA-US DO1328 TCGA-AC-A2BK 6fa2a667-9c36-4526-8a58-1975e863a806 female alive C50.9 78 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 1 145117775 243098983 22 54 403 7 4 6 5 32 0.82 0 57 0 0 57 10 10 66 10 12 22.34 34.93 65.04 8 1 3 Whitelist BRCA-US 17_8 0.87 0 0 0 0.86 1 High confidence BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA With other complex events 76 0.09 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 2 101755104 101980166 1 1 403 0 0 1 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 22.34 0.09 99.79 2 2 3 Whitelist BRCA-US 0.62 0.02 0 NA 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 3 NA NA 0 0 403 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 4 139767102 140004813 1 1 403 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA NA NA NA 22.34 0.12 99.86 0 2 3 Whitelist BRCA-US 0.62 0.1 0 NA 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 5 44467843 44715718 1 1 403 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 5 22.34 0.24 97.09 0 2 3 Whitelist BRCA-US 0.62 0.01 0 NA 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 6 73157203 170141682 1 1 403 1 0 0 0 0 0.39 0.06 2 0 0 NA NA NA NA NA NA 22.34 99.86 0 1 1 3 Whitelist BRCA-US 0.62 0.18 0 0 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 7 NA NA 0 0 403 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 8 31896789 139505359 58 139 403 23 11 13 11 81 0.08 0 58 0 0 58 36 36 62 36 40 22.34 42.88 57.11 1 1 2 Whitelist BRCA-US 1_17 0.77 0 0 0 0.48 1 High confidence BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA Canonical without polyploidization 197 0.24 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 9 NA NA 0 0 403 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 10 84399771 84440568 1 1 403 0 1 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 22.34 0.03 99.79 0 2 3 Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 11 99312639 106194571 1 5 403 0 1 0 0 4 0.39 0.01 3 0 0 NA NA NA 6 6 6 22.34 21.15 78.42 0 1 2 Whitelist BRCA-US 17_8 0.93 0.05 0 0 0.59 1 Linked to high confidence BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA With other complex events 6 0.01 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 12 NA NA 0 0 403 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.53 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 13 NA NA 0 0 403 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 14 NA NA 0 0 403 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.49 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 15 NA NA 0 0 403 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 16 NA NA 0 0 403 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 17 34384789 59566711 21 70 403 4 4 8 5 49 0.56 0 47 0 0 47 5 7 55 5 7 22.34 40.93 54.64 1 4 3 Whitelist BRCA-US 1_8 0.76 0 0 0 0.64 1 Low confidence BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA With other complex events 91 0.11 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 18 NA NA 0 0 403 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 19 58182676 58364508 1 1 403 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 22.34 0.31 98.23 0 3 NA Whitelist BRCA-US 0.62 0.03 NA NA 0.59 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 20 NA NA 0 0 403 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 21 NA NA 0 0 403 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.5 NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 22 NA NA 0 0 403 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 X NA NA 0 0 403 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.96 0 NA NA 1 No BRCA-US 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 BRCA 0.6 1.93 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5249 TCGA-A2-A04X 733a2a0f-b37a-4b81-b49e-3c0f30d1eb37 female alive C50.9 34 NA 1349 NA Included Breast-AdenoCA BRCA US 0 44.38 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 2 233203667 233314442 1 1 2 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 94.78 99.89 0 0 4 NA Whitelist BRCA-US 0.62 0.37 NA NA 0.59 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 2 0.5 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 14 74007049 74039013 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 94.78 99.08 0 0 4 NA Whitelist BRCA-US 0.62 0.19 NA NA 0.59 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 2 0.5 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::74f31744-0aed-4633-beec-4e203315f0b7 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 74f31744-0aed-4633-beec-4e203315f0b7 BRCA 0.8 4.23 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO2503 TCGA-BH-A0DT 74f31744-0aed-4633-beec-4e203315f0b7 female alive C50.9 41 NA 1170 NA Included Breast-AdenoCA BRCA US 0 38.49 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 1 106598933 112813685 1 1 212 0 0 0 1 0 0.39 0 3 NA NA NA NA NA 7 5 6 40.61 77.51 19.52 0 2 3 Whitelist BRCA-US 0.62 0 NA NA 0.59 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 2 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 3 32984474 82175838 11 18 212 2 4 2 3 7 0.8 0 23 0 0 23 5 6 32 5 7 40.61 33.86 62.99 0 2 1 Whitelist BRCA-US 10 0.99 0 0 0 0.84 0 Low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 29 0.07 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 4 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 5 138999815 139247230 1 1 212 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 7 7 7 40.61 0.15 97.19 0 2 NA Whitelist BRCA-US 0.62 0.01 0 NA 0.59 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 6 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 7 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 8 42418912 64651143 3 3 212 0 0 2 1 0 0.3 0.75 5 0 0 5 3 5 17 6 10 40.61 72.35 24.23 5 4 5 Whitelist BRCA-US 0.62 0.92 0 0 0.59 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 9 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 10 54407919 63446307 74 102 212 15 15 19 25 28 0.31 0 109 0 0 109 5 10 113 5 10 40.61 62.92 33.65 0 2 4 Whitelist BRCA-US 3 0.68 0 0 0 0.59 0 Low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 176 0.42 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 11 59935523 67621236 10 17 212 2 1 4 3 7 0.57 0 17 0 0 17 5 8 27 7 10 40.61 68.02 28.33 4 2 4 Whitelist BRCA-US 0.62 0 0 0 0.64 0 Low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 27 0.06 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 12 13061062 110884348 1 7 212 3 0 0 2 2 0.14 0.63 9 0 0 9 7 7 9 7 7 40.61 21.3 75.03 0 1 2 Whitelist BRCA-US 0.62 0.84 0 0 0.59 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 12 0.03 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 13 28926955 102111691 3 6 212 0 2 2 2 0 0.57 0.71 11 0 0 11 3 8 14 5 5 40.61 30.1 69.9 2 2 1 Whitelist BRCA-US 0.68 0.9 0 0 0.64 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 12 0.03 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 14 21299867 63371689 8 18 212 2 2 1 3 10 0.8 0 22 0 0 22 4 7 24 4 7 40.61 93.54 2.75 1 3 6 Whitelist BRCA-US 11 0.68 0 0 0 0.84 0 Low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 26 0.06 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 15 43850675 74214625 1 13 212 0 0 0 2 11 0.11 0 8 0 0 8 3 5 16 3 7 40.61 10.59 89.41 0 1 2 Whitelist BRCA-US 3_10 0.99 0 0 0 0.48 0 Linked to low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 15 0.04 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 16 7383661 8343595 1 2 212 0 1 0 0 1 0.39 0.03 3 0 NA NA NA NA 8 3 6 40.61 72.48 23.05 0 2 3 Whitelist BRCA-US 0.54 0.12 0 NA 0.59 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 3 0.01 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 17 53125513 74215540 5 5 212 1 2 1 1 0 0.9 0.83 11 0 0 11 4 11 12 4 4 40.61 43.58 51.16 1 2 3 Whitelist BRCA-US 0.93 0.97 0 0 0.92 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 18 10558329 21254584 5 8 212 2 2 0 1 3 0.53 0.08 6 0 0 6 3 4 6 3 4 40.61 22.58 72.78 0 1 2 Whitelist BRCA-US 11 0.87 0.23 0 0 0.64 0 Linked to low confidence BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA With other complex events 13 0.03 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 19 4471893 8077914 3 3 212 1 1 0 1 0 0.8 0.32 5 0 0 5 5 5 8 6 6 40.61 40.25 52.47 0 1 2 Whitelist BRCA-US 0.87 0.57 0 0 0.84 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 6 0.01 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 20 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 21 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b 22 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::75113445-d2d6-44a0-866c-c9175e6d214b X NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 75113445-d2d6-44a0-866c-c9175e6d214b BRCA 0.76 2.35 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5347 TCGA-A2-A0D4 75113445-d2d6-44a0-866c-c9175e6d214b female alive C50.9 37 NA 496 NA Included Breast-AdenoCA BRCA US 0 16.32 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 1 31412202 192961867 1 5 106 1 1 1 1 1 1 0.28 9 0 0 9 5 9 10 5 5 21.87 100 0 0 4 3 Whitelist BRCA-US 0.93 0.52 0 0 1 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 9 0.04 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 2 NA NA 0 0 106 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 3 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 4 NA NA 0 0 106 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.05 NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 5 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 6 151869392 152362260 1 1 106 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 21.87 0.29 99.56 0 2 3 Whitelist BRCA-US 0.62 0.09 NA NA 0.59 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 7 151911095 151993349 1 1 106 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 21.87 0 99.77 0 2 NA Whitelist BRCA-US 0.62 0.16 NA NA 0.59 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 8 115905844 118132998 1 1 106 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 21.87 1.52 98.47 0 2 3 Whitelist BRCA-US 0.62 0.15 NA NA 0.59 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 9 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 10 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 11 48231454 78887152 34 69 106 10 8 6 10 35 0.73 0 86 0 0 86 4 6 89 5 7 21.87 77.34 19.19 0 3 16 Whitelist BRCA-US 0.62 0 0 0 0.81 1 Low confidence BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA With other complex events 103 0.49 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 12 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 13 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 14 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 15 NA NA 0 0 106 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 16 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 17 25428583 38145015 12 42 106 2 3 5 2 30 0.57 0 48 0 0 48 7 7 61 7 7 21.87 63.85 30.92 1 30 2 Whitelist BRCA-US 11 0.68 0 0 0 0.64 1 High confidence BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA With other complex events 54 0.25 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 18 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 19 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 20 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 21 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 22 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::784de7ac-8424-42eb-83d4-a1bebaa42b97 X NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 784de7ac-8424-42eb-83d4-a1bebaa42b97 BRCA 0.6 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3037 TCGA-A1-A0SM 784de7ac-8424-42eb-83d4-a1bebaa42b97 male alive C50.9 77 NA 242 NA Included Breast-AdenoCA BRCA US 0 7.96 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 1 117542776 235259849 1 8 172 2 0 0 0 6 0.11 0.89 8 0 0 8 3 7 10 4 4 69.21 56.24 43.76 2 6 4 Whitelist BRCA-US 3 0.87 1 0 0 0.48 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 10 0.03 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 2 134130766 236602441 3 6 172 0 1 1 1 3 0.8 0.21 3 0 0 NA NA NA 8 4 7 69.21 73.27 26.61 0 2 3 Whitelist BRCA-US 8 0.62 0.44 0 0 0.84 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 9 0.03 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 3 71030656 123559127 1 4 172 0 1 1 0 2 0.57 0.55 4 0 0 4 4 4 8 6 8 69.21 96.92 0 1 3 4 Whitelist BRCA-US 1 0.78 0 0 0.64 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 4 22316483 180926915 1 5 172 2 0 0 0 3 0.11 0.12 5 0 0 5 3 3 6 3 4 69.21 48.59 51.4 1 2 3 Whitelist BRCA-US 0.68 0.31 0 0 0.48 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 5 243257 54982012 1 8 172 3 2 1 2 0 0.8 0.75 15 0 0 15 3 7 17 3 7 69.21 92.15 5.18 7 3 1 Whitelist BRCA-US 0.87 0.92 0 0 0.84 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 16 0.05 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 6 84524478 151748862 1 2 172 1 1 0 0 0 0.57 0.34 3 0 0 NA NA NA 4 3 3 69.21 91.63 8.22 4 4 6 Whitelist BRCA-US 0.68 0.59 0 0 0.64 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 7 66989773 153770402 1 2 172 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 7 5 5 69.21 45.84 54.04 3 2 4 Whitelist BRCA-US 0.54 0.05 NA 0 0.48 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 8 107480527 115223161 13 18 172 4 2 4 3 5 0.84 0 32 0 0 32 4 7 50 5 9 69.21 67.14 29.35 19 8 10 Whitelist BRCA-US 0.87 0 0 0 0.88 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 31 0.09 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 9 NA NA 0 0 172 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.38 NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 10 118742588 128883341 3 6 172 1 0 1 1 3 0.8 0.04 4 0 0 4 4 4 10 7 7 69.21 90.89 8.93 0 3 4 Whitelist BRCA-US 0.68 0.14 0 0 0.84 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 9 0.03 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 11 47962555 118630004 1 3 172 3 0 0 0 0 0.03 0.72 3 0 0 NA NA NA 5 5 5 69.21 95.21 4.36 3 4 2 Whitelist BRCA-US 0.41 0.9 0 0 0.33 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 12 34288100 109068735 2 5 172 1 1 0 0 3 0.57 0 5 0 0 5 3 3 19 10 10 69.21 85.96 14.02 0 4 2 Whitelist BRCA-US 8 0.68 0 0 0 0.64 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 13 NA NA 0 0 172 0 0 0 0 0 NA 0.84 NA 0 NA NA NA NA 8 3 6 0 0 0 0 0 0 Whitelist BRCA-US NA 0.97 0 NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 14 34639271 74274781 1 3 172 0 2 0 0 1 0.11 0.01 8 0 0 8 4 6 17 4 6 69.21 91.45 7.64 0 4 5 Whitelist BRCA-US 0.62 0.06 0 0 0.48 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 15 NA NA 0 0 172 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.26 NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 16 NA NA 0 0 172 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.59 NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 17 NA NA 0 0 172 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.59 NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 18 210922 22314826 1 3 172 0 1 0 0 2 0.39 1 2 NA 0.01 NA NA NA NA NA NA 69.21 28.31 71.62 0 2 4 Whitelist BRCA-US 0.62 1 NA 0.01 0.59 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 19 17022672 48380328 1 9 172 4 0 0 0 5 0.01 0 15 0 0 15 8 15 18 8 8 69.21 56.29 35.59 0 3 4 Whitelist BRCA-US 0.48 0 0 0 0.16 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 13 0.04 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 20 35790995 36955244 2 2 172 0 0 1 1 0 0.57 0 4 0 0 4 4 4 12 5 5 69.21 91.62 1.3 0 2 4 Whitelist BRCA-US 0.68 0.02 0 0 0.64 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 21 NA NA 0 0 172 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 22 NA NA 0 0 172 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.9 NA NA NA 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::7861a5f2-8910-4bcb-9c34-f79c5acd6e21 X 99168891 139602506 1 11 172 2 0 2 1 6 0.53 0 12 0 0 12 4 7 16 4 5 69.21 99.76 0.01 1 4 3 Whitelist BRCA-US 19_8 0.62 0.02 0 0 0.64 0 No BRCA-US 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 BRCA 0.54 3.35 Breast-AdenoCA NA 16 0.05 NA 4 BRCA-US DO4185 TCGA-A8-A075 7861a5f2-8910-4bcb-9c34-f79c5acd6e21 female alive C50.9 42 NA 518 NA Included Breast-AdenoCA BRCA US 0 17.04 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 1 24520897 41620524 2 2 222 0 0 1 1 0 0.57 0.26 5 0 0 5 3 5 25 5 7 61.66 86.4 13.6 0 3 4 Whitelist BRCA-US 0.68 0.5 0 0 0.64 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 2 17767847 241528229 1 12 222 3 6 1 1 1 0.11 0.18 31 0 0 31 6 9 34 6 9 61.66 84.23 15.67 0 3 4 Whitelist BRCA-US 0.54 0.4 0 0 0.48 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 23 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 3 5449076 156876693 6 12 222 1 1 2 2 6 0.88 0 44 0 0 44 4 6 57 4 5 61.66 74.07 25.77 1 3 10 Whitelist BRCA-US 0.93 0 0 0 0.91 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 4 6813323 6826896 1 1 222 0 1 0 0 0 0.39 0 2 0.09 NA NA NA NA 6 4 4 61.66 5.27 94.71 0 3 5 Whitelist BRCA-US 0.62 0 0.09 NA 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 5 87809949 116482340 2 4 222 0 0 1 1 2 0.57 0.21 4 0 0 4 0 4 8 4 6 61.66 42.18 55.16 7 2 1 Whitelist BRCA-US 1 0.44 0 0 0.64 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 6 16999823 132689456 1 6 222 0 6 0 0 0 0 0.67 16 0 0 16 5 9 17 5 8 61.66 72.5 24.65 0 3 5 Whitelist BRCA-US 0.04 0.87 0 0 0.03 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 7 2884172 154160282 1 6 222 0 2 2 0 2 0.26 0.55 15 0 0 15 7 15 18 7 18 61.66 98.08 1.69 0 3 4 Whitelist BRCA-US 0.62 0.78 0 0 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 8 2905786 122207030 1 6 222 2 1 1 1 1 0.9 0.01 29 0 0 29 3 8 35 3 8 61.66 96.58 0 0 6 5 Whitelist BRCA-US 0.93 0.04 0 0 0.92 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 9 104707309 120168085 2 2 222 0 1 0 1 0 0.57 0.86 6 0 0 6 5 6 12 8 8 61.66 77.47 21.83 0 3 2 Whitelist BRCA-US 0.68 0.99 0 0 0.64 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 10 29462459 62224583 1 3 222 1 2 0 0 0 0.3 0.87 10 0 0 10 3 5 16 3 6 61.66 28.79 67.8 0 2 6 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 11 8973707 116813661 1 6 222 1 3 0 0 2 0.11 0.63 5 0 0 5 3 4 6 3 4 61.66 52.04 47.53 0 2 4 Whitelist BRCA-US 0.68 0.84 0 0 0.48 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 12 46299994 46363388 2 2 222 1 1 0 0 0 0.57 0.26 2 0 0 NA NA NA 15 4 4 61.66 71.19 25.07 0 4 5 Whitelist BRCA-US 0.68 0.51 0 0 0.64 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 13 NA NA 0 0 222 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.04 NA NA NA 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 14 45714116 71259486 1 3 222 0 3 0 0 0 0.03 0.33 3 0 0 NA NA NA 5 3 3 61.66 0.09 98.99 0 2 4 Whitelist BRCA-US 0.41 0.59 0 0 0.33 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 15 71162145 101652553 1 2 222 0 2 0 0 0 0.11 0.54 3 0 0 NA NA NA 4 3 3 61.66 99.92 0 0 3 500 Whitelist BRCA-US 0.54 0.77 0 0 0.48 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 16 2348367 58699487 1 3 222 0 3 0 0 0 0.03 0.84 9 0 0 9 6 7 11 6 6 61.66 65.12 34.79 0 2 3 Whitelist BRCA-US 0.41 0.97 0 0 0.33 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 17 42173016 42183384 1 1 222 0 1 0 0 0 0.39 0.84 1 0 NA NA NA NA NA NA NA 61.66 42.79 57.19 0 2 NA Whitelist BRCA-US 0.62 0.97 0 NA 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 18 33881421 34078197 1 1 222 0 1 0 0 0 0.39 0.67 2 0 NA NA NA NA 6 3 5 61.66 56.19 43.78 0 4 6 Whitelist BRCA-US 0.62 0.88 0 NA 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 19 13884037 38211408 1 2 222 0 2 0 0 0 0.11 0.01 8 0 0 8 6 8 14 7 13 61.66 15.24 84.59 0 3 2 Whitelist BRCA-US 0.54 0.06 0 0 0.48 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 20 5486071 60710425 1 5 222 0 3 0 0 2 0.03 0.49 6 0 0 6 3 6 7 3 3 61.66 92.34 0 0 3 4 Whitelist BRCA-US 0.45 0.73 0 0 0.33 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 21 26665800 27391139 1 1 222 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 61.66 77.35 0 0 3 5 Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 22 NA NA 0 0 222 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::786e8dbe-442e-4551-87b3-b4c333b04dd4 X 28896109 150228315 3 5 222 0 0 1 2 2 0.3 0.76 19 0 0 19 8 17 20 8 17 61.66 96.56 0.06 0 2 3 Whitelist BRCA-US 0.68 0.92 0 0 0.59 0 No BRCA-US 786e8dbe-442e-4551-87b3-b4c333b04dd4 BRCA 0.61 2.97 Breast-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 BRCA-US DO2897 TCGA-BH-A0WA 786e8dbe-442e-4551-87b3-b4c333b04dd4 female alive C50.9 82 NA 372 NA Included Breast-AdenoCA BRCA US 0 12.24 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 1 205295257 223811605 2 2 455 1 1 0 0 0 0.57 0.08 6 0 0 6 5 6 30 11 12 52.65 30.51 69.49 0 2 1 Whitelist BRCA-US 0.68 0.23 0 0 0.64 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 2 20258342 192000290 1 36 455 1 13 0 1 21 0 0 31 0 0 31 15 28 35 15 15 52.65 36.16 63.75 0 2 3 Whitelist BRCA-US 1_13_3_9 0.41 0.01 0 0 0 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 51 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 3 10605391 178361369 1 28 455 1 11 2 1 13 0 0 38 0 0 38 15 32 38 15 15 52.65 38.81 58.13 0 2 3 Whitelist BRCA-US 10_14_6_9 0.54 0 0 0 0.02 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 43 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 4 11998058 42989650 2 5 455 0 0 1 1 3 0.57 0.45 7 0 0 7 3 5 15 8 8 52.65 66.56 33.42 0 2 1 Whitelist BRCA-US 0.62 0.7 0 0 0.64 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 5 32013009 32480033 4 4 455 1 1 1 1 0 1 1 5 0 0 5 3 5 17 6 6 52.65 89.91 9.95 0 3 4 Whitelist BRCA-US 1 1 0 0 1 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 6 10127538 139006053 1 28 455 1 9 0 0 18 0 0 25 0 0 25 7 11 32 7 11 52.65 36.34 63.52 0 4 3 Whitelist BRCA-US 16_19_2_3_9 0.54 0 0 0 0.01 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 38 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 7 42219760 42289824 1 1 455 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA 16 9 9 52.65 62.1 35.21 0 2 NA Whitelist BRCA-US 0.62 0.07 0 NA 0.59 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 8 68576633 78377102 2 4 455 0 0 1 1 2 0.57 0 3 0 0 NA NA NA 26 11 11 52.65 84.13 12.04 0 3 4 Whitelist BRCA-US 2 1 0 0 0 0.64 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 9 719127 134356972 1 19 455 2 4 1 1 11 0.39 0.14 10 0 0 10 5 10 11 5 5 52.65 13.81 86.06 1 2 3 Whitelist BRCA-US 12_2_3_6 0.72 0.34 0 0 0.59 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 27 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 10 62267222 114875661 1 10 455 0 3 0 0 7 0.03 0.5 6 0 0 6 5 6 13 5 5 52.65 31.25 68.57 0 2 3 Whitelist BRCA-US 3 0.62 0.74 0 0 0.33 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 11 1408377 77037997 1 10 455 1 3 0 1 5 0.28 0.43 13 0 0 13 3 6 17 5 5 52.65 84.15 15.43 0 2 1 Whitelist BRCA-US 2 0.86 0.68 0 0 0.59 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 12 12808529 31430324 1 4 455 0 3 0 1 0 0.11 0.51 14 0 0 14 6 14 19 9 9 52.65 93.01 3.24 0 4 5 Whitelist BRCA-US 0.54 0.75 0 0 0.48 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 13 46228833 110804097 1 7 455 0 3 0 0 4 0.03 0.61 9 0 0 9 7 9 14 8 8 52.65 65.7 34.3 0 2 3 Whitelist BRCA-US 2 0.77 0.82 0 0 0.33 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 14 33114978 103499363 1 17 455 0 6 0 0 11 0 0.04 22 0 0 22 12 22 29 12 12 52.65 62.25 36.84 0 2 1 Whitelist BRCA-US 16_3_6_9 0.62 0.15 0 0 0.03 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 23 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 15 37958626 98093391 2 8 455 0 0 1 1 6 0.57 0.01 17 0 0 17 12 17 19 12 12 52.65 78.29 21.61 0 3 2 Whitelist BRCA-US 0.87 0.06 0 0 0.64 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 16 1760879 85555538 1 13 455 0 6 0 0 7 0 0 18 0 0 18 8 18 22 8 9 52.65 52.44 47.47 0 2 1 Whitelist BRCA-US 14_6 0.54 0.01 0 0 0.03 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 17 5721037 45381042 1 2 455 0 2 0 0 0 0.11 1 4 0 0.03 4 4 4 8 8 8 52.65 69.08 30.9 0 1 2 Whitelist BRCA-US 0.54 1 0 0.03 0.48 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 18 8269020 53676637 1 2 455 0 2 0 0 0 0.11 0.15 7 0 0 7 5 7 8 6 6 52.65 37.94 62.02 0 2 1 Whitelist BRCA-US 0.54 0.35 0 0 0.48 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 19 7906763 47722043 1 6 455 0 1 0 1 4 0.57 0.87 5 0 0 5 5 5 9 8 8 52.65 53.13 37.98 0 2 1 Whitelist BRCA-US 6 0.62 1 0 0 0.64 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 20 48907272 49116672 1 1 455 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA NA NA NA 52.65 98.69 0.33 0 1 2 Whitelist BRCA-US 0.62 0.34 0 NA 0.59 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 21 36219742 45449415 1 2 455 0 2 0 0 0 0.11 0.03 4 0 0 4 4 4 9 7 7 52.65 18.66 57.06 0 2 3 Whitelist BRCA-US 0.54 0.11 0 0 0.48 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a 22 35492114 42381814 1 6 455 1 5 0 0 0 0.01 0.08 8 0 0 8 3 7 9 3 7 52.65 3.62 95.39 0 2 3 Whitelist BRCA-US 0.25 0.22 0 0 0.19 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::790ff5db-b7f3-4946-aaed-305f66b1dd6a X 131792520 150852525 1 6 455 1 2 0 0 3 0.3 0.33 13 0 0 13 6 6 26 14 14 52.65 49.39 50.38 0 3 2 Whitelist BRCA-US 12 0.62 0.59 0 0 0.59 0 No BRCA-US 790ff5db-b7f3-4946-aaed-305f66b1dd6a BRCA 0.54 1.76 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 1 BRCA-US DO4635 TCGA-BH-A0AV 790ff5db-b7f3-4946-aaed-305f66b1dd6a female alive C50.9 52 NA 1180 NA Included Breast-AdenoCA BRCA US 0 38.82 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 1 94431583 157181111 12 13 530 2 8 1 1 1 0.01 0 40 0 0 40 6 11 111 6 14 44.33 94.7 2.28 0 7 3 Whitelist BRCA-US 0.41 0 0 0 0.19 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 25 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 2 182317958 183117227 10 10 530 1 5 2 2 0 0.31 0 11 0 0 11 3 6 99 12 16 44.33 98.48 1.43 0 8 7 Whitelist BRCA-US 0.62 0 0 0 0.59 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 20 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 3 53036583 187618217 2 5 530 1 1 1 1 1 1 0.03 22 0 0 22 5 8 42 11 15 44.33 53.98 42.72 0 4 2 Whitelist BRCA-US 0.93 0.1 0 0 1 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 9 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 4 70947228 71126397 2 4 530 3 1 0 0 0 0.11 0.01 7 0 0 7 3 3 31 6 8 44.33 21.62 78.37 0 8 7 Whitelist BRCA-US 0.54 0.03 0 0 0.48 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 5 95857979 139077957 4 9 530 1 7 0 0 1 0 1 13 0 0 13 4 9 42 5 13 44.33 38.45 58.88 0 2 3 Whitelist BRCA-US 0.12 1 0 0 0.04 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 17 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 6 1759680 160510927 1 16 530 1 11 0 2 2 0 0.03 30 0 0 30 10 18 32 10 18 44.33 16.26 83.61 0 2 3 Whitelist BRCA-US 11 0.06 0.11 0 0 0.01 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 30 0.03 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 7 134895274 135288906 4 4 530 0 2 1 1 0 0.57 0.34 5 0 0 5 0 3 32 7 19 44.33 99.76 0.01 0 4 6 Whitelist BRCA-US 0.68 0.59 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 8 101263920 101601522 4 4 530 1 2 0 1 0 0.57 0.04 6 0 0 6 3 5 49 10 10 44.33 92.27 4.21 0 14 1 Whitelist BRCA-US 0.68 0.13 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 9 35742986 36600081 2 2 530 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 13 4 6 44.33 4.29 95.57 0 4 5 Whitelist BRCA-US 0.54 0 0 0 0.48 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 4 0 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 10 949660 110004864 1 23 530 1 14 0 0 8 0 0.84 31 0 0 31 8 15 32 8 15 44.33 73.49 23.1 0 3 2 Whitelist BRCA-US 0.01 0.97 0 0 0 0 Linked to low confidence BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA With other complex events 38 0.04 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 11 9158465 9546361 2 2 530 0 0 1 1 0 0.57 0.92 4 0 0 4 4 4 45 9 13 44.33 4.96 94.48 0 2 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 4 0 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 12 52089438 52721222 3 3 530 1 2 0 0 0 0.3 0.47 5 0 0 5 0 3 44 10 17 44.33 42.47 57.51 0 1 5 Whitelist BRCA-US 0.62 0.72 0 0 0.59 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 6 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 13 99175332 99402945 6 6 530 2 4 0 0 0 0.06 0.09 4 0 0 4 3 4 12 8 10 44.33 15.58 84.42 0 3 2 Whitelist BRCA-US 0.54 0.26 0 0 0.48 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 12 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 14 23896677 65402631 2 2 530 0 0 1 1 0 0.57 1 12 0 0 12 5 12 23 9 17 44.33 2.43 96.66 0 2 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 4 0 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 15 40935113 95050865 1 8 530 0 6 2 0 0 0.01 0.29 17 0 0 17 7 8 18 7 8 44.33 4.77 95.11 0 2 4 Whitelist BRCA-US 0.21 0.53 0 0 0.16 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 16 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 16 70603186 70707434 2 2 530 0 0 1 1 0 0.57 0.5 2 0 0 NA NA NA 19 5 7 44.33 2.53 97.37 0 2 3 Whitelist BRCA-US 0.68 0.74 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 4 0 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 17 73615291 74195421 3 3 530 0 3 0 0 0 0.03 0 6 0 0 6 0 4 52 7 7 44.33 33.93 66.06 0 5 6 Whitelist BRCA-US 0.41 0 0 0 0.33 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 6 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 18 2545640 60510502 1 4 530 0 4 0 0 0 0.01 0.01 11 0 0 11 4 9 12 5 5 44.33 21.12 74.21 0 2 3 Whitelist BRCA-US 0.21 0.05 0 0 0.16 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 19 16122013 50351369 2 4 530 0 4 0 0 0 0.01 0.01 22 0 0 22 4 9 35 6 10 44.33 54.75 37.97 0 6 4 Whitelist BRCA-US 0.21 0.03 0 0 0.16 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 20 60611742 61048021 3 3 530 0 3 0 0 0 0.03 0.01 3 0 0 NA NA NA 28 11 28 44.33 99.19 0 0 4 5 Whitelist BRCA-US 0.41 0.05 0 0 0.33 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 6 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 21 38958060 45893770 6 12 530 1 3 0 2 6 0.34 0 8 0 0 8 4 6 13 4 6 44.33 70.12 7.23 0 4 5 Whitelist BRCA-US 10 0.93 0.01 0 0 0.59 0 Low confidence BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA With other complex events 18 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 22 24497288 43362993 1 12 530 2 6 1 1 2 0.08 0.01 16 0 0 16 4 6 17 4 6 44.33 6.77 93.23 0 2 3 Whitelist BRCA-US 0.62 0.03 0 0 0.48 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 22 0.02 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::8785012f-f73e-4d68-87cf-1d804af32782 X 23729915 86404048 2 4 530 0 2 1 1 0 0.57 0 11 0 0 11 3 5 16 3 5 44.33 1.68 98.09 0 2 1 Whitelist BRCA-US 0.68 0.02 0 0 0.64 0 No BRCA-US 8785012f-f73e-4d68-87cf-1d804af32782 BRCA 0.56 2.92 Breast-AdenoCA NA 8 0.01 stopgain,17_7578188_A_C,CN:4 2 BRCA-US DO1392 TCGA-A7-A13D 8785012f-f73e-4d68-87cf-1d804af32782 female alive C50.9 46 NA 267 NA Included Breast-AdenoCA BRCA US 0 8.78 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 1 167703887 167839360 4 4 415 0 2 1 1 0 0.57 0 4 0 0 4 0 3 36 12 12 60.31 27.72 72.26 0 2 3 Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 2 74699927 74837998 3 3 415 0 1 1 1 0 0.8 0.21 3 0 0 NA NA NA 35 15 15 60.31 29.15 70.76 0 2 3 Whitelist BRCA-US 0.87 0.44 0 0 0.84 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 3 128843273 128878895 2 2 415 0 0 1 1 0 0.57 0.12 2 0 0 NA NA NA 34 11 11 60.31 40.87 59.08 0 2 3 Whitelist BRCA-US 0.68 0.31 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 4 54189641 185814377 1 4 415 0 4 0 0 0 0.01 0 6 0 0 6 3 5 9 3 5 60.31 84.13 15.86 0 2 1 Whitelist BRCA-US 0.21 0.02 0 0 0.16 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 5 42594570 168302182 1 13 415 3 4 0 2 4 0.27 0.48 15 0 0 15 4 12 17 4 4 60.31 93.58 3.76 0 2 1 Whitelist BRCA-US 0.68 0.72 0 0 0.59 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 22 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 6 31319672 154978796 1 11 415 3 2 1 0 5 0.34 0.68 17 0 0 17 5 9 17 5 9 60.31 88.92 8.18 5 1 2 Whitelist BRCA-US X 0.87 0.88 0 0 0.59 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 7 5212045 148611019 1 16 415 1 6 2 1 6 0.08 1 15 0 0 15 6 10 16 6 10 60.31 22.64 77.14 1 2 3 Whitelist BRCA-US 6 0.46 1 0 0 0.48 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 26 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 8 48216985 50202309 2 5 415 0 1 0 1 3 0.57 0.01 4 0 0 4 4 4 27 6 7 60.31 39.6 60.29 0 2 3 Whitelist BRCA-US 0.62 0.03 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 9 5429410 124906649 1 8 415 1 5 0 0 2 0.01 0.03 11 0 0 11 6 11 12 6 6 60.31 98.97 0.33 0 1 2 Whitelist BRCA-US 11 0.54 0.11 0 0 0.19 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 10 7644933 90178390 1 7 415 1 3 1 0 2 0.28 0.73 7 0 0 7 4 7 11 4 4 60.31 65.42 34.41 3 1 2 Whitelist BRCA-US 0.62 0.9 0 0 0.59 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 11 9463027 124277017 1 20 415 3 7 0 0 10 0 0.03 11 0 0 11 7 11 12 7 7 60.31 42.03 57.54 3 2 1 Whitelist BRCA-US 9 0.54 0.12 0 0 0.14 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 30 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 12 3554181 100098303 1 10 415 4 4 0 0 2 0.05 0.35 19 0 0 19 7 16 20 7 7 60.31 83.16 13.1 0 1 2 Whitelist BRCA-US 0.41 0.61 0 0 0.46 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 13 37889463 113610308 1 3 415 1 1 0 0 1 0.57 0.18 11 0 0 11 3 7 11 3 5 60.31 83.01 16.99 0 3 2 Whitelist BRCA-US 0.87 0.39 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 14 55152770 69000328 2 2 415 0 0 1 1 0 0.57 0.48 6 0 0 6 4 6 9 7 7 60.31 99.03 0.05 0 1 2 Whitelist BRCA-US 0.68 0.73 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 15 48571163 91997394 1 6 415 3 1 0 0 2 0.11 0.88 8 0 0 8 4 8 10 4 4 60.31 52.74 47.16 1 1 2 Whitelist BRCA-US 0.68 1 0 0 0.48 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 16 10866187 10998560 3 3 415 0 1 1 1 0 0.8 0.01 3 0 0 NA NA NA 13 6 8 60.31 98.14 1.5 0 1 3 Whitelist BRCA-US 0.87 0.06 0 0 0.84 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 17 3491150 76396528 1 13 415 2 4 0 0 7 0.06 0.03 11 0 0 11 9 11 11 9 9 60.31 92.45 2.3 0 1 2 Whitelist BRCA-US 0.62 0.12 0 0 0.48 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 18 31937398 60432003 1 8 415 0 2 0 0 6 0.11 0.36 6 0 0 6 4 6 6 4 4 60.31 29.64 70.32 2 2 1 Whitelist BRCA-US 0.68 0.61 0 0 0.48 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 19 2788499 51420171 1 15 415 1 10 0 1 3 0 0 20 0 0 20 11 20 21 11 11 60.31 43.91 55.92 21 2 3 Whitelist BRCA-US 17 0.04 0.01 0 0 0.01 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 27 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 20 48708106 48982439 3 3 415 0 1 1 1 0 0.8 0 3 0 0 NA NA NA 14 5 7 60.31 7.55 85.4 2 2 3 Whitelist BRCA-US 0.87 0.02 0 0 0.84 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 21 18765805 18833829 2 2 415 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 15 4 4 60.31 48.16 29.2 0 7 NA Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e 22 NA NA 0 0 415 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.96 0 NA NA 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::88db1340-e4bf-451a-87c0-6e9168296f5e X 80799876 140484386 1 3 415 2 1 0 0 0 0.3 0.01 5 0 0 5 5 5 12 7 7 60.31 96.91 2.86 0 1 0 Whitelist BRCA-US 0.62 0.06 0 0 0.59 0 No BRCA-US 88db1340-e4bf-451a-87c0-6e9168296f5e BRCA 0.53 1.49 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 1 BRCA-US DO4695 TCGA-EW-A1PB 88db1340-e4bf-451a-87c0-6e9168296f5e female alive C50.9 70 NA 608 NA Included Breast-AdenoCA BRCA US 0 20 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 1 155690011 235116262 3 5 343 1 1 1 0 2 0.8 0.01 12 0 0 12 8 8 21 10 10 51.73 57.88 42.12 7 2 3 Whitelist BRCA-US 0.93 0.05 0 0 0.84 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 8 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 2 4653440 175863031 5 11 343 2 0 1 2 6 0.53 0 24 0 0 24 9 15 30 9 9 51.73 42.78 57.13 12 1 2 Whitelist BRCA-US 0.87 0.01 0 0 0.64 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 16 0.02 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 False positive; manually removed BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 3 108413755 195287400 4 14 343 1 2 1 0 10 0.57 0.14 11 0 0 11 4 7 20 8 12 51.73 75.99 20.84 5 3 2 Whitelist BRCA-US 2_8 0.68 0.33 0 0 0.64 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 18 0.03 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 4 65221322 78418096 1 2 343 1 1 0 0 0 0.57 0 3 0 0 NA NA NA NA NA NA 51.73 95.63 4.33 0 1 2 Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 5 61770683 147746451 3 3 343 1 0 1 1 0 0.8 0.74 4 0 0 4 3 4 12 8 8 51.73 44.92 54.95 3 1 0 Whitelist BRCA-US 0.87 0.91 0 0 0.84 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 6 43335892 113274184 10 12 343 2 2 3 3 2 0.94 0.31 21 0 0 21 11 11 23 12 12 51.73 64.29 35.56 3 3 2 Whitelist BRCA-US 0.68 0.55 0 0 0.96 0 High confidence BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA With other complex events 22 0.03 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 7 73525557 132679620 2 5 343 1 1 0 0 3 0.57 0.63 1 0 0 NA NA NA NA NA NA 51.73 28.18 71.59 2 2 NA Whitelist BRCA-US 0.62 0.84 0 0 0.64 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 7 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 8 2753068 133957766 1 13 343 4 1 1 2 5 0.39 1 11 0 0 11 5 9 11 5 5 51.73 48.82 51.18 5 2 1 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 21 0.03 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 9 939578 92283568 1 4 343 0 0 1 2 1 0.3 0.09 3 0 0 NA NA NA 4 3 3 51.73 11.44 88.4 0 0 1 Whitelist BRCA-US 0.54 0.25 0 0 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 7 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 10 75405629 97266881 1 3 343 2 0 0 0 1 0.11 0.37 6 0 0 6 6 6 17 12 14 51.73 67.64 28.99 0 1 2 Whitelist BRCA-US 0.62 0.62 0 0 0.48 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 11 60711878 119411941 1 6 343 3 0 1 1 1 0.28 0.7 2 0 0 NA NA NA NA NA NA 51.73 78.74 20.83 3 1 2 Whitelist BRCA-US 0.54 0.9 0 0 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 11 0.02 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 12 9289832 75327648 1 4 343 3 1 0 0 0 0.11 0.52 10 0 0 10 5 10 13 6 6 51.73 56.61 43.31 2 2 1 Whitelist BRCA-US 0.54 0.76 0 0 0.48 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 8 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 13 48874448 86721376 1 7 343 4 0 0 0 3 0.01 1 4 0 0 4 3 4 4 3 3 51.73 100 0 0 1 0 Whitelist BRCA-US 0.13 1 0 0 0.16 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 11 0.02 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 14 59623651 98121517 1 5 343 2 2 0 0 1 0.26 0.12 9 0 0 9 5 9 11 6 6 51.73 34.67 64.41 0 1 2 Whitelist BRCA-US 0.62 0.3 0 0 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 9 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 15 34565369 101070446 1 14 343 3 2 0 0 9 0.14 0.02 8 0 0 8 4 8 8 4 4 51.73 92.31 7.59 0 1 2 Whitelist BRCA-US 6 0.68 0.08 0 0 0.59 0 Linked to high confidence BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA With other complex events 19 0.03 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 16 11461457 68990320 1 4 343 3 1 0 0 0 0.11 0.31 7 0 0 7 5 7 8 5 5 51.73 24.75 75.15 1 2 1 Whitelist BRCA-US 0.54 0.57 0 0 0.48 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 8 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 17 40797676 42698544 1 1 343 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 6 4 4 51.73 66.02 28.72 0 1 2 Whitelist BRCA-US 0.62 0.57 0 NA 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 18 2379419 37313336 1 3 343 2 0 0 0 1 0.11 0.74 4 0 0 4 3 4 4 3 4 51.73 32.17 67.8 2 2 0 Whitelist BRCA-US 0.62 0.91 0 0 0.48 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 19 NA NA 0 0 343 0 0 0 0 0 NA 1 NA 0.01 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0.01 NA NA 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 20 31159073 31300990 1 1 343 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA 5 4 4 51.73 53.72 45.31 0 2 3 Whitelist BRCA-US 0.62 0.18 0 NA 0.59 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 21 40951013 41510186 2 2 343 2 0 0 0 0 0.11 0.21 3 0 0 NA NA NA 4 3 4 51.73 70.61 6.74 0 3 1 Whitelist BRCA-US 0.54 0.43 0 0 0.48 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 22 NA NA 0 0 343 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.09 0 NA NA 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8bd68696-5eeb-46d7-9dc6-c39c849029a4 X 12045792 18377263 2 2 343 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 12 6 6 51.73 3.68 96.09 1 2 NA Whitelist BRCA-US 0.68 0.02 0 0 0.64 0 No BRCA-US 8bd68696-5eeb-46d7-9dc6-c39c849029a4 BRCA 0.75 1.87 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO3110 TCGA-A8-A08L 8bd68696-5eeb-46d7-9dc6-c39c849029a4 female deceased C50.9 89 304 NA NA Included Breast-AdenoCA BRCA US 1 10 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 1 70464572 75250321 3 5 500 1 1 1 0 2 0.8 0 7 0 0 7 4 7 30 8 8 68.33 100 0 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.84 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 2 155784315 158514926 3 3 500 2 0 0 1 0 0.3 0.75 5 0 0 5 3 5 45 7 7 68.33 47.46 49.85 0 3 4 Whitelist BRCA-US 0.62 0.91 0 0 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 3 4979331 87053735 8 36 500 1 2 2 3 28 0.8 0 35 0 0 35 5 5 48 5 5 68.33 63.78 33.15 0 4 15 Whitelist BRCA-US 10_4_6 0.87 0.02 0 0 0.84 1 Low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 44 0.04 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 4 39957449 163913725 1 21 500 0 4 1 0 16 0.04 0.15 13 0 0 13 5 5 18 5 8 68.33 59.56 40.42 0 2 3 Whitelist BRCA-US 13_3 0.84 0.35 0 0 0.36 1 Linked to low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 26 0.03 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 5 21403277 21444462 1 1 500 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 4 5 68.33 25.47 71.84 0 3 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 6 66019356 135278033 6 50 500 5 5 1 1 38 0.15 0 57 0 0 57 6 6 77 6 6 68.33 70.27 29.6 3 4 3 Whitelist BRCA-US 12_13_3 0.68 0 0 0 0.59 1 Low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 62 0.06 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 7 39005785 48559752 3 7 500 0 0 1 2 4 0.3 0.69 11 0 0 11 5 11 36 5 8 68.33 99.76 0 0 4 5 Whitelist BRCA-US 0.77 0.89 0 0 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 10 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 8 61853482 136089944 26 63 500 7 7 7 5 37 0.93 0 65 0 0 65 4 7 78 4 7 68.33 63.48 33.1 5 6 17 Whitelist BRCA-US 10_15_3_4_6 0.77 0 0 0 0.95 1 Low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 89 0.09 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 9 125485275 128363075 1 10 500 2 1 1 1 5 0.9 0.1 11 0 0 11 0 3 26 4 4 68.33 18.32 80.97 0 26 8 Whitelist BRCA-US 0.96 0.27 0 0 0.92 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 15 0.02 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 10 37398211 116249333 2 6 500 0 2 1 1 2 0.57 0.34 10 0 0 10 7 9 22 7 9 68.33 96.24 0.04 0 5 4 Whitelist BRCA-US 0.62 0.59 0 0 0.64 1 Linked to low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA After polyploidization 10 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 11 13381081 70874312 1 9 500 2 2 0 0 5 0.26 0.24 15 0 0 15 4 8 42 6 7 68.33 90.44 5.66 0 4 3 Whitelist BRCA-US 0.85 0.48 0 0 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 13 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 12 2943203 96943878 29 54 500 7 3 10 9 25 0.27 0 88 0 0 88 9 10 100 9 12 68.33 85.49 14.5 9 3 4 Whitelist BRCA-US 6 0.68 0 0 0 0.59 1 High confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 83 0.08 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 13 22850041 105164539 1 23 500 3 1 1 1 17 0.57 0.01 23 0 0 23 5 5 25 5 5 68.33 36.35 62.8 13 3 4 Whitelist BRCA-US 12_4_6 0.54 0.03 0 0 0.64 1 Linked to low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 29 0.03 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 14 68556169 106149566 1 2 500 0 2 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 68.33 99.09 0 0 4 5 Whitelist BRCA-US 0.54 0 NA 0 0.48 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 15 32410181 71959926 17 22 500 2 1 5 9 5 0.03 0 34 0 0 34 5 10 41 5 10 68.33 74.5 25.42 0 4 2 Whitelist BRCA-US 0.62 0 0 0 0.33 1 Low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 39 0.04 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 16 6327727 6731231 1 1 500 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 3 3 68.33 43.02 56.94 0 5 7 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 17 55080349 55090907 1 1 500 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 3 4 68.33 93.32 1.32 0 3 5 Whitelist BRCA-US 0.62 0.01 0 NA 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 18 57469680 70037559 3 19 500 0 2 0 1 16 0.3 0 18 0 0 18 4 5 34 4 5 68.33 66.83 33.13 1 4 3 Whitelist BRCA-US 13_6 0.72 0 0 0 0.59 1 Linked to low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 22 0.02 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 19 5671583 17827313 2 4 500 0 1 2 1 0 0.57 0.52 10 0 0 10 4 8 13 4 10 68.33 94.32 5.51 0 4 6 Whitelist BRCA-US 0.68 0.76 0 0 0.64 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 8 0.01 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 20 11131846 59577547 7 15 500 3 2 1 1 8 0.67 0 29 0 0 29 9 11 33 9 9 68.33 78.53 20.42 12 4 2 Whitelist BRCA-US 21 0.99 0 0 0 0.74 1 High confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 22 0.02 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 21 35999819 47786448 29 43 500 11 7 3 8 14 0.21 0 54 0 0 54 5 5 57 5 5 68.33 62.47 14.72 0 4 13 Whitelist BRCA-US 20 0.86 0 0 0 0.59 1 Low confidence BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA With other complex events 72 0.07 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 22 24742697 24876201 1 1 500 0 0 0 1 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 68.33 100 0 0 3 NA Whitelist BRCA-US 0.62 0.55 NA NA 0.59 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::8cf54607-01ce-42b0-9bd9-8627edd9f3b7 X NA NA 0 0 500 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 BRCA 0.55 3.76 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578538_-_T,CN:3 7 BRCA-US DO3804 TCGA-C8-A130 8cf54607-01ce-42b0-9bd9-8627edd9f3b7 female alive C50.9 52 NA 4 NA Included Breast-AdenoCA BRCA US 0 0.13 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 1 112706808 240884130 1 4 137 1 1 0 1 1 0.8 0.08 9 0 0 9 3 4 10 4 4 72.81 50.35 46.55 5 4 5 Whitelist BRCA-US 1 0.22 0 0 0.84 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 2 48997311 144253958 1 2 137 0 2 0 0 0 0.11 0.04 5 0 0 5 3 4 7 3 5 72.81 90.57 9.34 3 3 2 Whitelist BRCA-US 0.54 0.15 0 0 0.48 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 3 24411689 176045097 1 2 137 0 2 0 0 0 0.11 0.01 3 NA 0 NA NA NA NA NA NA 72.81 99.97 0 2 3 4 Whitelist BRCA-US 0.54 0.03 NA 0 0.48 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 4 103229641 108099020 1 2 137 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 72.81 0.21 99.57 8 2 3 Whitelist BRCA-US 0.54 0.04 NA 0 0.48 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 5 59311322 61906233 1 1 137 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 72.81 99.86 0 0 3 4 Whitelist BRCA-US 0.62 0.01 NA NA 0.59 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 6 11657826 66411417 1 5 137 1 1 0 0 3 0.57 0.59 8 0 0 8 6 8 9 6 6 72.81 99.85 0 4 4 3 Whitelist BRCA-US 8 0.93 0.81 0 0 0.64 1 Linked to low confidence BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA After polyploidization 7 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 7 NA NA 0 0 137 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.13 NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 8 27280903 40031251 8 10 137 1 2 3 2 2 0.8 0.07 15 0 0 15 5 9 16 5 9 72.81 76.78 23.08 0 2 3 Whitelist BRCA-US 6 0.86 0.22 0 0 0.84 1 Low confidence BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA With other complex events 18 0.07 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 9 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 10 87322920 113509134 28 30 137 8 10 5 5 2 0.46 0 26 0 0 26 7 21 65 8 21 72.81 70.88 25.7 3 1 3 Whitelist BRCA-US 0.62 0 0 0 0.64 1 High confidence BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA With other complex events 58 0.21 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 11 NA NA 0 0 137 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.09 NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 12 49299061 49596798 1 1 137 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 72.81 99.92 0 0 4 6 Whitelist BRCA-US 0.62 0.27 NA NA 0.59 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 13 NA NA 0 0 137 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.85 NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 14 63409166 67153520 3 5 137 0 0 2 1 2 0.3 0 7 0 0 7 4 4 32 7 7 72.81 87.69 11.4 2 2 7 Whitelist BRCA-US 10 0.68 0 0 0 0.59 1 Linked to high confidence BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA With other complex events 8 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 15 63868447 64284215 1 1 137 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 72.81 100 0 0 3 4 Whitelist BRCA-US 0.62 0.41 NA NA 0.59 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 16 48845994 49631912 4 10 137 0 1 2 1 6 0.57 0 6 0 0 6 0 3 14 3 5 72.81 50.44 44.88 1 2 4 Whitelist BRCA-US 10 0.86 0 0 0 0.64 1 Linked to high confidence BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA With other complex events 14 0.05 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 17 NA NA 0 0 137 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.81 NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 18 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 19 6418149 49427260 1 2 137 1 0 0 1 0 0.57 1 4 NA 0 4 3 4 5 3 3 72.81 99.8 0.02 5 3 2 Whitelist BRCA-US 0.68 1 NA 0 0.64 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 20 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 21 10698073 10772927 1 1 137 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 72.81 77.62 0 0 4 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd 22 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::9435447e-d65f-408b-863b-6576b1d652dd X 63110195 94772482 1 2 137 0 2 0 0 0 0.11 0.05 5 NA 0 5 3 4 6 3 3 72.81 99.7 0.07 1 3 2 Whitelist BRCA-US 0.54 0.16 NA 0 0.48 1 No BRCA-US 9435447e-d65f-408b-863b-6576b1d652dd BRCA 0.63 3.27 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:2 4 BRCA-US DO5808 TCGA-AO-A03N 9435447e-d65f-408b-863b-6576b1d652dd female alive C50.9 59 NA 1645 NA Included Breast-AdenoCA BRCA US 0 54.11 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 1 2149294 249211696 1 18 96 3 2 0 1 12 0.34 0 27 0 0 27 5 5 28 5 8 77.8 99.98 0 2 6 1 Whitelist BRCA-US 0.93 0 0 0 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 24 0.12 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 2 56302571 56783251 1 1 96 0 1 0 0 0 0.39 0.36 1 0 NA NA NA NA NA NA NA 77.8 99.91 0 0 3 NA Whitelist BRCA-US 0.62 0.61 0 NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 3 NA NA 0 0 96 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.2 NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 4 62920906 64017393 1 1 96 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 4 4 77.8 97.65 0 0 1 3 Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 5 27981079 28078727 1 1 96 0 1 0 0 0 0.39 0.29 2 0 NA NA NA NA 4 3 3 77.8 25.47 71.84 0 3 5 Whitelist BRCA-US 0.62 0.53 0 NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 6 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 7 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0.01 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0.01 NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 8 32450661 128918286 1 3 96 0 3 0 0 0 0.03 0.06 11 0 0 11 7 9 12 7 10 77.8 96.58 0 0 5 4 Whitelist BRCA-US 0.41 0.19 0 0 0.33 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 6 0.03 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 9 21177541 22460359 1 1 96 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 9 4 5 77.8 31.73 67.6 0 0 3 Whitelist BRCA-US 0.62 0.81 NA NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 10 NA NA 0 0 96 0 0 0 0 0 NA 0.21 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.44 0 NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 11 76546711 78185513 6 19 96 1 1 2 2 13 0.88 0 7 0 0 7 0 3 14 0 0 77.8 99.44 0 0 44 49 Whitelist BRCA-US 0.62 0 0 0 0.91 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 25 0.13 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 12 11770534 11934043 1 1 96 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 77.8 99.92 0 0 1 3 Whitelist BRCA-US 0.62 0.33 NA NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 13 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 14 22256968 107052080 1 1 96 0 1 0 0 0 0.39 0.77 5 NA 0 5 5 5 7 5 6 77.8 78.99 17.94 0 4 3 Whitelist BRCA-US 0.62 0.93 NA 0 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 16 30465336 72394113 1 2 96 0 1 1 0 0 0.57 0.74 7 0 0 7 3 4 9 3 5 77.8 86.35 8.65 0 3 4 Whitelist BRCA-US 0.68 0.91 0 0 0.64 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 17 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 18 NA NA 0 0 96 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 19 13043653 13191056 2 2 96 0 2 0 0 0 0.11 0.44 2 0 0 NA NA NA 5 3 3 77.8 99.46 0.11 0 3 8 Whitelist BRCA-US 0.54 0.69 0 0 0.48 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 20 15518134 16267828 1 1 96 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 77.8 92.95 0 0 4 6 Whitelist BRCA-US 0.62 0.9 NA NA 0.59 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 21 22056287 22975511 1 2 96 1 1 0 0 0 0.57 0.11 4 0 0 4 3 4 5 3 3 77.8 77.35 0 0 3 1 Whitelist BRCA-US 0.68 0.29 0 0 0.64 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 22 25589752 39242835 1 2 96 1 1 0 0 0 0.57 0.32 4 NA 0 4 3 4 7 3 3 77.8 88.89 0 0 5 3 Whitelist BRCA-US 0.68 0.57 NA 0 0.64 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96312510-c126-485d-8109-ed81844a1dc3 X NA NA 0 0 96 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.26 NA NA NA 0 No BRCA-US 96312510-c126-485d-8109-ed81844a1dc3 BRCA 0.67 3.14 Breast-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 3 BRCA-US DO2323 TCGA-AN-A0G0 96312510-c126-485d-8109-ed81844a1dc3 female alive C50.9 56 NA 16 NA Included Breast-AdenoCA BRCA US 0 0.53 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 1 110122284 120933910 2 11 86 2 1 2 1 5 0.88 0 11 0 0 11 6 6 17 9 9 23.96 51.27 45.69 1 2 4 Whitelist BRCA-US 19 0.87 0 0 0 0.91 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 17 0.1 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 2 NA NA 0 0 86 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 3 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 4 NA NA 0 0 86 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.97 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 5 NA NA 0 0 86 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 6 67391914 81285721 1 5 86 0 1 1 0 3 0.57 0.04 4 0 0 4 4 4 4 4 4 23.96 60.09 39.76 0 1 2 Whitelist BRCA-US 0.93 0.13 0 0 0.64 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 7 0.04 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 7 NA NA 0 0 86 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 8 NA NA 0 0 86 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.23 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 9 NA NA 0 0 86 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.51 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 10 NA NA 0 0 86 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 11 57015730 60790739 2 3 86 0 1 1 0 1 0.57 0 2 0 0 NA NA NA 6 4 6 23.96 56.4 43.17 0 1 2 Whitelist BRCA-US 0.87 0 0 0 0.64 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 5 0.03 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 12 NA NA 0 0 86 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 13 NA NA 0 0 86 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 14 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 15 NA NA 0 0 86 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 16 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 17 NA NA 0 0 86 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 18 NA NA 0 0 86 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 19 2500531 45602766 1 10 86 1 2 0 1 6 0.57 0 9 0 0 9 9 9 12 12 12 23.96 99.83 0 16 3 1 Whitelist BRCA-US 1 0.86 0 0 0 0.64 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 14 0.08 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 20 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 21 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa 22 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::96457ebf-ae88-41f4-97e5-cdc3163418aa X 21369458 21390484 1 1 86 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 23.96 0 99.77 0 2 NA Whitelist BRCA-US 0.62 0.58 NA NA 0.59 0 No BRCA-US 96457ebf-ae88-41f4-97e5-cdc3163418aa BRCA 0.87 2.01 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2114 TCGA-BH-A0H0 96457ebf-ae88-41f4-97e5-cdc3163418aa female alive C50.9 69 NA 461 NA Included Breast-AdenoCA BRCA US 0 15.16 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 1 65323035 241233903 1 2 202 1 1 0 0 0 0.57 0.01 5 0 0 5 3 5 7 3 3 62.06 67.37 29.66 4 3 0 Whitelist BRCA-US 0.68 0.03 0 0 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 2 159664646 172537729 11 12 202 2 3 1 5 1 0.36 0.45 17 0 0 17 11 13 27 12 14 62.06 99.79 0.11 4 3 4 Whitelist BRCA-US 0.62 0.69 0 0 0.59 0 High confidence BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA After polyploidization 23 0.06 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 3 2461216 98452328 1 5 202 0 1 0 1 3 0.57 0.05 6 0.01 0 6 3 4 7 3 4 62.06 23.85 76.03 8 2 4 Whitelist BRCA-US 0.68 0.17 0.01 0.01 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 7 0.02 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 4 36303099 108458117 16 27 202 3 1 6 6 11 0.21 0 41 0 0 41 12 14 48 12 14 62.06 27.9 69.53 8 2 4 Whitelist BRCA-US 11 0.84 0 0 0 0.59 0 High confidence BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA With other complex events 43 0.11 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 5 3372097 172966849 1 6 202 5 0 1 0 0 0.01 0.06 13 0 0 13 7 7 16 7 7 62.06 52.18 45.16 11 2 1 Whitelist BRCA-US 0.25 0.18 0 0 0.19 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 12 0.03 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 6 112981693 157326914 1 6 202 4 0 1 1 0 0.11 0.66 13 0 0 13 3 5 18 3 5 62.06 99.76 0.11 6 5 7 Whitelist BRCA-US 0.54 0.86 0 0 0.48 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 12 0.03 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 7 23643668 106397292 1 3 202 1 1 0 1 0 0.8 0.01 6 0.02 0 6 3 4 7 3 5 62.06 99.78 0 7 3 4 Whitelist BRCA-US 0.87 0.05 0.02 0 0.84 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 8 10687622 16395819 4 4 202 0 1 1 2 0 0.57 0.63 6 0 0 6 4 5 14 4 6 62.06 94.07 2.51 1 2 3 Whitelist BRCA-US 0.68 0.84 0 0 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 8 0.02 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 9 111600596 139352622 1 2 202 1 0 0 1 0 0.57 0.03 7 NA 0 7 5 7 10 5 5 62.06 22.57 74.31 1 4 6 Whitelist BRCA-US 0.68 0.1 NA 0 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 10 110197032 121335390 6 7 202 0 2 2 2 1 0.57 0.5 7 0 0 7 7 7 13 8 8 62.06 73.06 23.52 2 3 2 Whitelist BRCA-US 0.68 0.75 0 0 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 False positive; manually removed BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 11 16582735 78899879 15 26 202 4 3 4 4 11 0.98 0 33 0 0 33 10 13 34 10 14 62.06 30.49 68.96 5 4 2 Whitelist BRCA-US 4 0.92 0 0 0 0.99 0 High confidence BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA With other complex events 41 0.1 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 12 98965423 99113698 1 1 202 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 4 4 62.06 99.92 0 0 3 4 Whitelist BRCA-US 0.62 0.01 NA NA 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 13 NA NA 0 0 202 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.39 NA NA NA 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 14 71951684 103922015 1 3 202 2 0 0 1 0 0.3 0.84 4 0 0 4 0 4 11 5 7 62.06 95.2 3.89 21 3 4 Whitelist BRCA-US 0.62 0.98 0 0 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 15 35125933 35283455 1 1 202 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 7 3 3 62.06 98.95 0.91 0 4 8 Whitelist BRCA-US 0.62 0.41 NA NA 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 16 73555630 74468589 1 2 202 0 0 0 1 1 0.39 0.27 3 0 NA NA NA NA 12 4 8 62.06 72.99 26.91 0 2 3 Whitelist BRCA-US 0.68 0.51 0 NA 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 3 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 17 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 18 24059390 40167434 1 3 202 1 0 0 0 2 0.39 0.67 3 0 0 NA NA NA 7 7 7 62.06 21.56 78.4 1 2 4 Whitelist BRCA-US 21 0.62 0.87 0 0 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 19 46150347 58235382 1 3 202 1 1 0 0 1 0.57 0.3 5 0 0 5 3 5 9 3 4 62.06 98.27 0.91 0 2 4 Whitelist BRCA-US 0.62 0.55 0 0 0.64 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 5 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 20 35943756 60123567 14 14 202 0 4 4 6 0 0.14 0 24 0 0 24 7 9 26 7 9 62.06 97.51 1.53 2 4 6 Whitelist BRCA-US 0.62 0 0 0 0.59 0 High confidence BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA With other complex events 28 0.07 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 21 25157122 37778362 2 7 202 3 1 0 0 3 0.11 0 12 0 0 12 6 8 18 6 6 62.06 61.94 15.42 3 2 4 Whitelist BRCA-US 0.41 0 0 0 0.48 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 11 0.03 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 22 29329466 30229574 1 2 202 0 0 1 0 1 0.39 0.31 3 0 NA NA NA NA 9 3 4 62.06 99.99 0.01 0 2 3 Whitelist BRCA-US 0.68 0.56 0 NA 0.59 0 No BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA NA 3 0.01 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::993103b1-e5a1-4c33-8629-be53ebc41d64 X 29228730 35455689 7 7 202 2 0 2 3 0 0.44 0 15 0 0 15 4 10 46 4 6 62.06 52.33 47.44 11 2 8 Whitelist BRCA-US 0.68 0 0 0 0.64 0 Low confidence BRCA-US 993103b1-e5a1-4c33-8629-be53ebc41d64 BRCA 0.41 3.34 Breast-AdenoCA With other complex events 14 0.03 frameshift_deletion,17_7578222_-_TC,CN:2 4 BRCA-US DO2593 TCGA-A8-A094 993103b1-e5a1-4c33-8629-be53ebc41d64 female alive C50.9 75 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 1 9790782 185567475 1 15 361 3 2 0 1 9 0.34 0.03 8 0 0 8 3 6 16 6 9 32.52 39.6 60.05 0 2 3 Whitelist BRCA-US 17 0.93 0.11 0 0 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 2 124515783 152687591 2 3 361 0 1 0 1 1 0.57 0.85 6 0 0 6 6 6 10 10 10 32.52 17.62 82.28 1 1 2 Whitelist BRCA-US 0.87 0.98 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 3 8619684 170470349 9 11 361 4 0 3 2 2 0.27 0.05 5 0 0 5 5 5 5 5 5 32.52 24.67 75.18 0 2 1 Whitelist BRCA-US 0.62 0.16 0 0 0.59 0 Low confidence BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA Canonical without polyploidization 20 0.03 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 4 40431901 184310426 1 11 361 1 3 0 0 7 0.11 0.83 5 0 0 5 3 3 6 3 4 32.52 25.19 72.12 0 2 1 Whitelist BRCA-US 8 0.62 0.97 0 0 0.48 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 5 21590832 102074076 1 3 361 0 3 0 0 0 0.03 0.06 7 0 0 7 4 7 9 5 5 32.52 69.61 27.55 0 2 1 Whitelist BRCA-US 0.41 0.2 0 0 0.33 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 6 17322307 170070693 1 17 361 1 5 0 0 11 0.01 0.02 8 0 0 8 3 8 9 3 3 32.52 23.04 76.78 0 2 3 Whitelist BRCA-US 8 0.25 0.08 0 0 0.19 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 23 0.03 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 7 128140716 142119333 1 1 361 0 0 0 1 0 0.39 0.41 1 0 0 NA NA NA 8 5 5 32.52 26.35 73.62 0 2 NA Whitelist BRCA-US 0.62 0.66 0 0 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 8 10490268 95467389 1 5 361 0 3 0 0 2 0.03 0.4 8 0 0 8 5 8 12 6 6 32.52 18.47 77.52 0 2 3 Whitelist BRCA-US 0.62 0.65 0 0 0.33 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 9 77975335 115508378 1 7 361 1 1 0 0 5 0.57 0.89 7 0 0 7 3 7 11 3 4 32.52 43.15 54.25 0 1 3 Whitelist BRCA-US 5 0.96 1 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 10 44232847 51575777 3 3 361 0 1 1 1 0 0.8 0.9 5 0 0 5 3 5 10 3 6 32.52 63.32 36.49 0 1 2 Whitelist BRCA-US 0.87 1 0 0 0.84 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 11 33863348 65683514 5 5 361 0 2 1 2 0 0.53 0.08 4 0 0 4 3 4 16 4 4 32.52 43.96 55.9 0 4 2 Whitelist BRCA-US 0.68 0.23 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 12 29725650 32976358 3 3 361 0 3 0 0 0 0.03 0 6 0 0 6 0 3 13 3 3 32.52 83.46 12.55 0 4 2 Whitelist BRCA-US 0.41 0 0 0 0.33 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 13 48883773 49120686 1 1 361 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 4 4 32.52 30.77 69.23 0 0 2 Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 14 66248636 84121557 1 1 361 1 0 0 0 0 0.39 0.88 3 0 NA NA NA NA 4 3 3 32.52 38.29 61.71 0 1 0 Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 15 37043402 90054922 1 3 361 1 1 0 0 1 0.57 1 5 0 0 5 3 3 6 3 3 32.52 57.19 42.72 0 2 0 Whitelist BRCA-US 0.62 1 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 16 4735012 14281770 3 3 361 1 2 0 0 0 0.3 0.03 2 0 0 NA NA NA 6 4 4 32.52 2.06 96.98 0 2 3 Whitelist BRCA-US 0.62 0.11 0 0 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 17 7428609 58230200 1 10 361 2 2 1 0 5 0.53 0.42 9 0 0 9 5 9 10 6 6 32.52 62.51 37.45 0 2 1 Whitelist BRCA-US 0.96 0.67 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 18 873337 12055736 2 2 361 0 0 1 1 0 0.57 0.74 1 0 0 NA NA NA 6 3 3 32.52 43.33 56.65 0 2 NA Whitelist BRCA-US 0.68 0.91 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 19 11023977 16408511 1 2 361 0 2 0 0 0 0.11 0.13 2 0 0 NA NA NA 4 3 3 32.52 13.29 86.54 0 2 4 Whitelist BRCA-US 0.54 0.32 0 0 0.48 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 20 31029861 50297877 1 2 361 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 32.52 0 99.9 0 2 NA Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 21 34332924 34349448 1 1 361 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 32.52 0 77.35 0 2 NA Whitelist BRCA-US 0.62 0.34 NA NA 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 22 18494054 50753672 1 6 361 1 3 1 0 1 0.28 0.08 2 0 0 NA NA NA NA NA NA 32.52 0.15 98.78 0 2 4 Whitelist BRCA-US 0.62 0.23 0 0 0.59 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9938ce5c-e74e-446e-a932-f096f85cc3b1 X 118060013 137284898 1 2 361 0 2 0 0 0 0.11 0.9 2 0 0 NA NA NA NA NA NA 32.52 0.01 99.99 0 2 3 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US 9938ce5c-e74e-446e-a932-f096f85cc3b1 BRCA 0.5 1.84 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579355_G_A,CN:1 1 BRCA-US DO5312 TCGA-AQ-A04J 9938ce5c-e74e-446e-a932-f096f85cc3b1 female alive C50.9 45 NA 160 NA Included Breast-AdenoCA BRCA US 0 5.26 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 1 246311779 246542207 1 1 143 1 0 0 0 0 0.39 0.35 2 0 NA NA NA NA 10 3 4 66.45 99.91 0.09 0 2 5 Whitelist BRCA-US 0.62 0.61 0 NA 0.59 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 2 71255417 71281727 2 2 143 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 13 7 7 66.45 48.85 48.47 0 3 NA Whitelist BRCA-US 0.68 1 0 0 0.64 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 3 118944666 165998674 8 8 143 3 2 2 1 0 0.8 0.51 11 0 0 11 8 11 15 8 8 66.45 38.49 61.39 0 3 2 Whitelist BRCA-US 0.87 0.75 0 0 0.84 1 High confidence BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA Canonical without polyploidization 16 0.06 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 4 NA NA 0 0 143 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.75 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 5 58384958 58638169 1 2 143 2 0 0 0 0 0.11 0.22 3 0 0 NA NA NA 7 3 6 66.45 99.79 0.07 0 2 3 Whitelist BRCA-US 0.54 0.46 0 0 0.48 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 6 20751045 166356238 1 4 143 3 1 0 0 0 0.11 0.86 10 0 0 10 5 9 14 5 5 66.45 99.84 0.02 0 3 2 Whitelist BRCA-US 0.54 0.99 0 0 0.48 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 7 51437672 148924929 1 3 143 0 1 1 1 0 0.8 0.06 7 0 0 7 3 5 10 5 7 66.45 97.45 0 1 4 2 Whitelist BRCA-US 0.87 0.19 0 0 0.84 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 8 156850 142288575 1 8 143 2 2 0 1 3 0.53 0.08 19 0 0 19 5 9 19 5 9 66.45 87.3 9.28 0 3 2 Whitelist BRCA-US 0.62 0.24 0 0 0.64 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 9 NA NA 0 0 143 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 10 NA NA 0 0 143 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.67 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 11 81257796 91119259 1 2 143 1 1 0 0 0 0.57 0.84 3 0 0 NA NA NA 8 4 5 66.45 22.88 76.69 0 3 5 Whitelist BRCA-US 0.68 0.98 0 0 0.64 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 12 93570706 95386943 1 2 143 2 0 0 0 0 0.11 0.32 3 0 0 NA NA NA 8 4 4 66.45 66.18 30.07 0 2 1 Whitelist BRCA-US 0.54 0.57 0 0 0.48 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 13 22617012 47972350 9 11 143 1 1 4 3 2 0.39 0 23 0 0 23 8 13 27 8 8 66.45 53.83 46.17 0 3 2 Whitelist BRCA-US 0.62 0 0 0 0.59 1 High confidence BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA With other complex events 20 0.07 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 14 NA NA 0 0 143 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 15 42650555 93407848 1 4 143 1 1 0 0 2 0.57 0.12 3 0 0 NA NA NA 4 0 3 66.45 99.91 0 0 1 3 Whitelist BRCA-US 0.54 0.31 0 0 0.64 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 16 56114569 87113977 1 1 143 0 1 0 0 0 0.39 0.44 2 0.01 NA NA NA NA 7 3 7 66.45 63.98 31.42 0 2 3 Whitelist BRCA-US 0.62 0.69 0.01 NA 0.59 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 17 NA NA 0 0 143 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 18 NA NA 0 0 143 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.41 NA NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 19 NA NA 0 0 143 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.2 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 20 49265207 49289118 1 1 143 0 0 0 1 0 0.39 1 1 0 NA NA NA NA NA NA NA 66.45 22.15 76.86 0 3 NA Whitelist BRCA-US 0.62 1 0 NA 0.59 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 21 20858732 41590537 1 2 143 2 0 0 0 0 0.11 0.03 3 0 0 NA NA NA 9 6 7 66.45 70.29 7.06 0 3 1 Whitelist BRCA-US 0.54 0.12 0 0 0.48 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d 22 NA NA 0 0 143 0 0 0 0 0 NA 0.24 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.48 0 NA NA 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9d95a65b-e41d-4f93-92d4-99dce29ff40d X 66162374 76147756 2 2 143 0 0 1 1 0 0.57 0.13 1 NA 0 NA NA NA NA NA NA 66.45 27.26 72.51 0 2 NA Whitelist BRCA-US 0.68 0.31 NA 0 0.64 1 No BRCA-US 9d95a65b-e41d-4f93-92d4-99dce29ff40d BRCA 0.72 2.81 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578467_G_T,CN:3 3 BRCA-US DO4080 TCGA-A7-A0CE 9d95a65b-e41d-4f93-92d4-99dce29ff40d female alive C50.9 57 NA 254 NA Included Breast-AdenoCA BRCA US 0 8.36 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 1 2210884 224017648 1 56 864 8 14 1 2 31 0 0 72 0 0 72 10 19 88 10 19 67.75 96.71 0.01 0 4 3 Whitelist BRCA-US 10_13_16_19_6_8 0.62 0 0 0 0.04 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 81 0.05 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 2 88355411 129752399 2 4 864 0 0 1 1 2 0.57 0.07 11 0 0 11 4 8 60 13 20 67.75 80.53 16.71 0 2 3 Whitelist BRCA-US 0.68 0.2 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 3 9745722 194626444 1 46 864 6 16 2 0 22 0 0.06 60 0 0 60 12 14 64 12 13 67.75 56.31 43.57 0 3 2 Whitelist BRCA-US 10_19_4_5_6 0.04 0.19 0 0 0 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 70 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 4 6056130 187601905 1 24 864 3 8 1 1 11 0.02 0.02 24 0 0 24 9 12 25 9 12 67.75 49.57 50.41 0 2 3 Whitelist BRCA-US 1_3 0.54 0.08 0 0 0.32 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 37 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 5 10244050 179437055 1 27 864 1 14 0 1 11 0 0.16 28 0 0 28 11 11 29 11 11 67.75 42.54 57.34 0 2 3 Whitelist BRCA-US 3_8 0.02 0.37 0 0 0 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 43 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 6 6002977 168886719 1 45 864 3 12 2 2 26 0 0.06 53 0 0 53 10 12 55 10 11 67.75 87.53 12.33 0 3 4 Whitelist BRCA-US 1_12_16_17_3_8_X 0.62 0.19 0 0 0.07 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 64 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 7 27995787 139646245 3 14 864 1 0 1 1 11 0.8 0.15 31 0 0 31 15 16 42 15 16 67.75 66.47 30.38 0 3 4 Whitelist BRCA-US 13_X 0.98 0.35 0 0 0.84 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 False positive; manually removed BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 8 6488297 144963441 1 39 864 1 15 0 0 23 0 0 61 0 0 61 7 10 63 7 11 67.75 74.91 21.52 0 4 3 Whitelist BRCA-US 1_12_5_6_7_X 0.12 0 0 0 0 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 55 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 9 13313751 75896160 2 2 864 0 0 1 1 0 0.57 0.48 13 0 0 13 4 6 24 6 8 67.75 53.41 43.51 0 5 1 Whitelist BRCA-US 0.68 0.73 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 10 81006691 123761331 2 6 864 0 0 1 1 4 0.57 0.19 13 0 0 13 13 13 36 18 18 67.75 58.5 38.09 0 2 3 Whitelist BRCA-US 1_15 0.54 0.41 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 8 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 11 57357792 59591035 2 4 864 1 0 1 0 2 0.57 0.26 2 0 0 NA NA NA 37 13 13 67.75 81.85 14.01 0 4 5 Whitelist BRCA-US 17 0.68 0.5 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 12 672188 132675128 1 44 864 1 15 1 0 27 0 0 52 0 0 52 11 11 53 11 11 67.75 56.29 39.82 0 3 7 Whitelist BRCA-US 17_6_8_X 0.2 0 0 0 0 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 61 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 13 83228651 83363455 2 2 864 0 0 1 1 0 0.57 0.93 4 0 0 4 4 4 23 7 7 67.75 79.55 17.67 0 2 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 14 35049022 96687688 1 14 864 0 7 0 0 7 0 0.77 8 0 0 8 4 8 11 6 11 67.75 49.52 49.76 0 2 3 Whitelist BRCA-US 1 0.54 0.93 0 0 0.01 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 21 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 15 31847969 99150170 1 20 864 0 8 0 0 12 0 0.41 20 0 0 20 9 12 22 9 13 67.75 91.54 3.59 0 3 4 Whitelist BRCA-US 10_8_X 0.54 0.65 0 0 0 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 28 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 16 50167299 70710778 1 5 864 2 2 0 0 1 0.26 0.53 6 0 0 6 6 6 22 8 8 67.75 79.53 15.94 0 4 5 Whitelist BRCA-US 0.62 0.76 0 0 0.59 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 17 17125410 72501496 1 21 864 1 7 0 4 9 0.02 0 33 0 0 33 7 14 41 7 10 67.75 73.92 20.68 5 3 4 Whitelist BRCA-US 0.54 0 0 0 0.33 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 33 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 18 21695070 75331191 1 7 864 3 1 0 0 3 0.11 0.75 9 0 0 9 4 8 16 4 9 67.75 92.78 7.18 0 1 2 Whitelist BRCA-US 0.47 0.92 0 0 0.48 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 19 2570979 50976539 1 15 864 1 6 1 0 7 0.01 0.04 18 0 0 18 5 17 23 6 17 67.75 87.29 4.94 0 3 4 Whitelist BRCA-US 1_3 0.62 0.13 0 0 0.21 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 23 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 20 14561367 18137868 2 3 864 1 1 0 0 1 0.57 0 2 0 0 NA NA NA 17 8 8 67.75 99.01 0 0 3 4 Whitelist BRCA-US 0.87 0.01 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 5 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 21 27527471 27552000 1 1 864 0 1 0 0 0 0.39 0.76 2 0 NA NA NA NA 10 8 9 67.75 31.8 45.55 0 2 3 Whitelist BRCA-US 0.62 0.92 0 NA 0.59 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 22 22299723 35521372 1 9 864 0 5 0 0 4 0 0 10 0 0 10 3 8 25 8 8 67.75 88.89 0 0 5 6 Whitelist BRCA-US 0.15 0 0 0 0.07 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 BRCA-US::9f6be944-83de-42ab-8738-f0022f475e61 X 64211866 154270745 5 15 864 1 0 2 2 10 0.53 0.19 28 0 0 28 14 23 43 14 23 67.75 52.51 47.48 0 2 4 Whitelist BRCA-US 12 0.73 0.41 0 0 0.64 0 No BRCA-US 9f6be944-83de-42ab-8738-f0022f475e61 BRCA 0.6 3.26 Breast-AdenoCA NA 20 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:3 5 BRCA-US DO5745 TCGA-GI-A2C9 9f6be944-83de-42ab-8738-f0022f475e61 female alive C50.9 58 NA 711 NA Included Breast-AdenoCA BRCA US 0 23.39 False positive; manually removed BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 1 31254630 243789937 254 351 740 64 65 60 65 97 0.97 0 345 0 0 345 16 19 347 16 19 80.15 76.47 23.53 24 5 2 Whitelist BRCA-US 6 0.99 0 0 0 0.98 1 High confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA With other complex events 605 0.41 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 2 14779558 37469234 2 2 740 0 0 1 1 0 0.57 0 6 0 0 6 6 6 19 7 7 80.15 99.59 0.3 0 2 3 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 3 101507807 101669402 2 2 740 0 0 1 1 0 0.57 0 4 0 0 4 4 4 18 5 10 80.15 85.39 14.57 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 4 181753118 182855726 5 5 740 3 0 1 1 0 0.28 0 7 0 0 7 4 7 34 11 11 80.15 96.79 0.65 0 1 2 Whitelist BRCA-US 0.62 0 0 0 0.59 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 10 0.01 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 5 74688832 80707030 15 15 740 2 3 5 5 0 0.61 0 25 0 0 25 6 11 29 6 11 80.15 44.48 52.61 0 1 2 Whitelist BRCA-US 0.73 0 0 0 0.69 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 30 0.02 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 6 5413201 164420806 102 163 740 23 27 23 29 61 0.79 0 129 0 0 129 6 16 130 6 8 80.15 89.56 10.28 5 4 3 Whitelist BRCA-US 1_11_7 0.85 0 0 0 0.84 1 Low confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA With other complex events 265 0.18 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 7 63694811 105774034 2 13 740 0 2 0 0 11 0.11 0.1 10 0 0 10 10 10 33 15 16 80.15 95.27 1.83 0 3 4 Whitelist BRCA-US 1 0.68 0.27 0 0 0.48 1 Linked to high confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA After polyploidization 15 0.01 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 8 630263 101924704 1 4 740 1 2 0 0 1 0.3 0 11 0 0 11 4 6 14 4 6 80.15 94.38 5.62 0 5 3 Whitelist BRCA-US 0.68 0 0 0 0.59 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 7 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 9 21844042 112515969 8 9 740 0 2 2 4 1 0.26 0 16 0 0 16 5 10 23 5 9 80.15 76.4 20.48 0 3 1 Whitelist BRCA-US 0.62 0 0 0 0.59 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 17 0.01 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 10 27987373 97519976 1 2 740 1 1 0 0 0 0.57 0 4 0 0 4 3 4 7 3 3 80.15 99.59 0.18 0 3 2 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 11 77294848 126487192 12 41 740 4 4 2 2 29 0.72 0 20 0 0 20 10 14 67 10 14 80.15 59.59 36.62 0 1 2 Whitelist BRCA-US 1_6 0.96 0 0 0 0.8 1 High confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA With other complex events 53 0.04 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 12 32653373 32950738 2 2 740 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 13 5 11 80.15 96.06 0.13 0 4 5 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 13 NA NA 0 0 740 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 14 79275118 79417050 2 2 740 0 0 1 1 0 0.57 0.14 3 0 0 NA NA NA 19 8 11 80.15 69.63 26.66 0 3 2 Whitelist BRCA-US 0.68 0.33 0 0 0.64 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 15 40886178 93842445 1 3 740 0 2 0 0 1 0.11 0 5 0 0 5 3 5 8 6 6 80.15 100 0 0 4 3 Whitelist BRCA-US 0.62 0 0 0 0.48 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 5 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 16 74043593 76796294 1 2 740 0 2 0 0 0 0.11 0 4 NA 0 4 3 4 9 4 8 80.15 99.47 0.43 0 3 4 Whitelist BRCA-US 0.54 0 NA 0 0.48 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 4 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 17 80554546 80564833 1 1 740 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 4 4 4 80.15 77.79 21.43 0 4 NA Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 18 3037071 12644210 9 11 740 2 2 2 3 2 0.95 0.14 6 0 0 6 6 6 11 9 11 80.15 95.31 0.03 0 3 4 Whitelist BRCA-US 0.98 0.33 0 0 0.97 1 Low confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA After polyploidization 20 0.01 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 19 12822132 24591286 8 31 740 2 4 0 2 23 0.26 0 27 0 0 27 4 6 31 4 4 80.15 92.17 0.56 0 5 3 Whitelist BRCA-US 1 0.53 0 0 0 0.59 1 Low confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA With other complex events 39 0.03 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 20 14413013 59616664 1 5 740 2 1 0 0 2 0.3 0 5 0 0 5 3 5 5 3 3 80.15 99.02 0 0 4 3 Whitelist BRCA-US 18 0.62 0.02 0 0 0.59 1 Linked to low confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA After polyploidization 8 0.01 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 21 NA NA 0 0 740 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.14 NA NA NA 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 22 NA NA 0 0 740 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.18 NA NA NA 1 No BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::9fefbe7c-f66a-4940-843e-285cb7b392c1 X 115424165 135666891 19 24 740 3 3 7 6 5 0.44 0.09 29 0 0 29 4 7 32 5 7 80.15 99.13 0.68 0 3 5 Whitelist BRCA-US 0.76 0.25 0 0 0.64 1 Low confidence BRCA-US 9fefbe7c-f66a-4940-843e-285cb7b392c1 BRCA 0.83 3.26 Breast-AdenoCA With other complex events 43 0.03 NA 4 BRCA-US DO1291 TCGA-AR-A24Z 9fefbe7c-f66a-4940-843e-285cb7b392c1 female alive C50.9 57 NA 1574 NA Included Breast-AdenoCA BRCA US 0 51.78 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 1 116023995 145085576 3 4 86 0 2 0 1 1 0.3 0.01 9 0 0 9 3 4 21 4 4 45.47 72.09 24.61 0 5 6 Whitelist BRCA-US 0.68 0.04 0 0 0.59 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 7 0.04 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 2 96807777 96836775 2 2 86 0 0 1 1 0 0.57 0.44 1 0 0 NA NA NA 8 3 4 45.47 60.37 36.94 0 3 NA Whitelist BRCA-US 0.68 0.69 0 0 0.64 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 4 0.02 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 3 46271407 51641960 1 2 86 2 0 0 0 0 0.11 0.29 2 0 0 NA NA NA NA NA NA 45.47 2.71 97.15 0 1 2 Whitelist BRCA-US 0.54 0.53 0 0 0.48 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 4 0.02 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 4 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 5 138047070 138161365 1 1 86 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 4 3 3 45.47 70.75 29.12 0 0 1 Whitelist BRCA-US 0.62 0.15 NA NA 0.59 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 6 1818503 41694723 1 2 86 2 0 0 0 0 0.11 0.25 2 NA 0.04 NA NA NA NA NA NA 45.47 0.04 99.72 0 1 2 Whitelist BRCA-US 0.54 0.49 NA 0.04 0.48 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 4 0.02 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 7 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 8 3865771 40365055 1 8 86 1 1 0 1 5 0.8 0.01 10 0 0 10 4 5 12 4 5 45.47 99.99 0 0 1 3 Whitelist BRCA-US 1 0.05 0 0 0.84 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 11 0.06 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 9 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 10 NA NA 0 0 86 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.69 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 11 31747324 43859784 2 4 86 0 0 1 1 2 0.57 0 7 0 0 7 3 7 18 4 4 45.47 34.34 65.23 0 4 1 Whitelist BRCA-US 0.68 0.01 0 0 0.64 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 6 0.03 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 12 58617819 89640811 8 9 86 3 1 2 2 1 0.8 0 21 0 0 21 9 9 32 9 9 45.47 52.46 47.45 0 1 5 Whitelist BRCA-US 0.85 0 0 0 0.84 1 High confidence BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA With other complex events 17 0.1 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 13 NA NA 0 0 86 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 14 NA NA 0 0 86 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.76 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 15 NA NA 0 0 86 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 16 19501850 70574079 1 2 86 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 45.47 4.46 95.45 0 1 2 Whitelist BRCA-US 0.54 1 NA 0 0.48 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 4 0.02 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 17 39261017 57993070 1 2 86 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 45.47 27.34 68.22 0 2 NA Whitelist BRCA-US 0.68 1 NA 0 0.64 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 4 0.02 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 18 NA NA 0 0 86 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 19 8832272 56430379 1 3 86 1 0 0 1 1 0.57 0.09 3 0 0 NA NA NA 4 3 3 45.47 65.49 34.33 0 1 2 Whitelist BRCA-US 0.87 0.25 0 0 0.64 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 5 0.03 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 20 9332788 58455068 1 5 86 1 1 0 0 3 0.57 0 4 0 0 4 0 4 8 3 5 45.47 28.01 71.03 0 1 2 Whitelist BRCA-US 0.93 0 0 0 0.64 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 7 0.04 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 21 17334864 17536658 1 1 86 0 0 1 0 0 0.39 0.28 2 NA NA NA NA NA 7 5 5 45.47 20.06 57.29 0 1 2 Whitelist BRCA-US 0.62 0.53 NA NA 0.59 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b 22 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a482fc4c-ff1d-46a0-a968-7df06422cc4b X NA NA 0 0 86 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.95 NA NA NA 1 No BRCA-US a482fc4c-ff1d-46a0-a968-7df06422cc4b BRCA 0.51 1.84 Breast-LobularCA NA 0 0 nonsynonymous_SNV;stopgain,17_7577539_A_G;17_7579346_T_A,CN:3 4 BRCA-US DO1537 TCGA-B6-A0WX a482fc4c-ff1d-46a0-a968-7df06422cc4b female deceased C50.9 40 639 NA NA Included Breast-LobularCA BRCA US 1 21.02 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 1 177919680 178792719 1 2 76 2 0 0 0 0 0.11 0.28 4 NA 0 4 4 4 6 5 6 77.99 99.73 0.27 0 2 4 Whitelist BRCA-US 0.54 0.53 NA 0 0.48 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 2 NA NA 0 0 76 0 0 0 0 0 NA 0.68 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.88 0 NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 3 71345835 79526571 3 3 76 1 1 0 1 0 0.8 0.82 2 0 0 NA NA NA 6 3 4 77.99 53.52 43.33 0 2 4 Whitelist BRCA-US 0.87 0.96 0 0 0.84 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 4 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 5 152028793 156492349 3 3 76 1 0 1 1 0 0.8 1 4 0 0 4 4 4 7 7 7 77.99 99.88 0 5 3 4 Whitelist BRCA-US 0.87 1 0 0 0.84 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 6 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 7 NA NA 0 0 76 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.41 NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 8 43660717 43696587 2 2 76 0 1 0 1 0 0.57 0.06 2 0 0 NA NA NA NA NA NA 77.99 96.58 0 4 3 4 Whitelist BRCA-US 0.68 0.18 0 0 0.64 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 9 31019648 31227737 1 1 76 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA 6 6 6 77.99 64.25 32.64 0 2 NA Whitelist BRCA-US 0.62 0.93 NA NA 0.59 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 10 98228639 122491007 2 2 76 1 1 0 0 0 0.57 0.09 4 0 0 4 4 4 6 6 6 77.99 96.57 0 1 3 4 Whitelist BRCA-US 0.68 0.25 0 0 0.64 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 11 28062319 128514909 8 18 76 1 2 3 2 10 0.8 0 20 0 0 20 7 8 21 8 8 77.99 42.48 57.09 2 2 4 Whitelist BRCA-US 0.68 0 0 0 0.84 1 High confidence BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA With other complex events 26 0.17 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 12 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 13 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 14 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 15 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 16 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 17 NA NA 0 0 76 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.18 0 NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 18 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 19 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 20 14264312 24862262 4 9 76 1 2 1 0 5 0.57 0 17 0 0 17 4 9 21 4 6 77.99 81.38 11.61 0 4 5 Whitelist BRCA-US 22 0.97 0 0 0 0.64 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 13 0.09 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 21 NA NA 0 0 76 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.48 NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e 22 23402189 34988884 2 7 76 0 1 0 1 5 0.57 0 11 0 0 11 4 5 20 5 5 77.99 99.92 0.08 0 5 9 Whitelist BRCA-US 11 0.68 0 0 0 0.64 1 Linked to high confidence BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA With other complex events 9 0.06 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a8015490-9740-45c9-8bd2-eb6d1beefc2e X NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US a8015490-9740-45c9-8bd2-eb6d1beefc2e BRCA 0.55 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_C_T,CN:2 4 BRCA-US DO4449 TCGA-E2-A152 a8015490-9740-45c9-8bd2-eb6d1beefc2e female alive C50.9 56 NA 588 NA Included Breast-AdenoCA BRCA US 0 19.34 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 1 147408680 212272247 37 39 463 9 9 10 9 2 0.99 0 62 0 0 62 6 9 95 8 10 40.96 40.58 56.14 11 3 4 Whitelist BRCA-US 3 0.98 0 0 0 1 0 Low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 76 0.08 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 2 26459899 233537709 1 14 463 2 10 0 0 2 0 0 14 0 0 14 11 14 15 11 11 40.96 0.9 99.01 12 2 3 Whitelist BRCA-US 11 0.05 0 0 0 0.01 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA Canonical without polyploidization 26 0.03 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 3 29682227 151361518 10 17 463 5 4 1 0 7 0.08 0.47 31 0 0 31 7 13 38 7 17 40.96 83.26 16.32 18 2 3 Whitelist BRCA-US 1 0.54 0.71 0 0 0.48 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 27 0.03 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 False positive; manually removed BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 4 6676170 185591573 1 7 463 1 5 0 0 1 0.01 0 12 0 0 12 5 12 13 5 5 40.96 2.58 97.4 2 2 3 Whitelist BRCA-US 0.13 0 0 0 0.19 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 5 108659861 118357839 3 3 463 0 2 0 1 0 0.3 0.7 6 0 0 6 5 6 32 9 9 40.96 50.22 47.1 0 2 3 Whitelist BRCA-US 0.62 0.9 0 0 0.59 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA Canonical without polyploidization 6 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 6 134899220 141764105 13 14 463 2 1 4 6 1 0.21 0.08 17 0 0 17 7 17 47 7 7 40.96 80.59 19.24 0 4 5 Whitelist BRCA-US 0.62 0.22 0 0 0.59 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 27 0.03 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 False positive; manually removed BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 7 123121252 157394758 6 6 463 0 2 2 2 0 0.57 0.41 9 0 0 9 5 9 25 15 19 40.96 99.76 0.02 0 3 4 Whitelist BRCA-US 0.68 0.66 0 0 0.64 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 8 26941811 100991255 1 9 463 1 6 0 0 2 0 0 9 0 0 9 5 7 10 5 7 40.96 23.7 76.18 2 2 3 Whitelist BRCA-US 0.41 0.01 0 0 0.09 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 9 71455580 141089210 15 16 463 6 2 3 4 1 0.51 0.47 21 0 0 21 11 21 24 14 14 40.96 65.5 34.38 1 2 1 Whitelist BRCA-US 0.79 0.72 0 0 0.64 0 High confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 31 0.03 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 10 104396122 104731991 3 5 463 1 1 0 1 2 0.8 0.66 1 0 0 NA NA NA 27 12 12 40.96 27.02 69.52 0 3 NA Whitelist BRCA-US 6 0.93 0.87 0 0 0.84 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 11 10547187 101046437 25 70 463 6 5 9 5 45 0.63 0 78 0 0 78 5 15 83 5 5 40.96 88.53 7.82 9 1 3 Whitelist BRCA-US 2_5 0.81 0 0 0 0.71 0 Low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 95 0.1 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 12 8758561 101580095 1 4 463 1 3 0 0 0 0.11 0 3 0 0 NA NA NA NA NA NA 40.96 0.42 99.56 5 2 3 Whitelist BRCA-US 0.54 0 0 0 0.48 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 13 22066253 84734551 1 4 463 2 2 0 0 0 0.26 0 2 0 0 NA NA NA NA NA NA 40.96 1.84 98.16 1 0 2 Whitelist BRCA-US 0.62 0.02 0 0 0.59 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 14 98094492 100118766 2 2 463 0 0 1 1 0 0.57 0.69 4 0 0 4 4 4 24 9 9 40.96 33.57 66.04 0 3 4 Whitelist BRCA-US 0.68 0.89 0 0 0.64 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 15 97537971 98638738 2 2 463 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 5 3 3 40.96 1.33 98.67 0 2 1 Whitelist BRCA-US 0.68 0.09 0 0 0.64 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 16 1358837 89802431 1 17 463 3 8 1 0 5 0.01 0.06 21 0 0 21 8 12 21 8 12 40.96 6.19 93.1 0 2 3 Whitelist BRCA-US 0.51 0.19 0 0 0.16 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 29 0.03 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 17 27546652 66832010 4 41 463 1 3 0 0 37 0.11 0 49 0 0 49 4 6 56 5 6 40.96 75.82 19.73 0 1 3 Whitelist BRCA-US 11_19 0.68 0 0 0 0.48 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 45 0.05 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 18 18931410 19962591 3 3 463 0 1 1 1 0 0.8 0.39 3 0 0 NA NA NA 9 5 5 40.96 4.58 90.74 0 2 1 Whitelist BRCA-US 0.87 0.63 0 0 0.84 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 19 13207846 29674953 5 13 463 2 1 1 1 8 0.9 0 12 0 0 12 7 7 25 7 7 40.96 63.16 29.56 2 3 4 Whitelist BRCA-US 11 0.68 0 0 0 0.92 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 18 0.02 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 False positive; manually removed BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 20 6838726 55229628 1 6 463 2 3 1 0 0 0.34 0.42 7 0 0 7 5 7 7 5 5 40.96 98.2 0.83 18 3 4 Whitelist BRCA-US 0.62 0.67 0 0 0.59 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 21 33868022 37112718 1 3 463 0 1 0 0 2 0.39 0.67 2 0 0 NA NA NA NA NA NA 40.96 70.61 6.74 0 1 2 Whitelist BRCA-US 8 0.87 0.87 0 0 0.59 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 22 22811987 46528025 1 12 463 0 3 0 1 8 0.11 0 19 0 0 19 3 4 20 3 3 40.96 12.8 87.2 6 7 3 Whitelist BRCA-US 11 0.62 0.02 0 0 0.48 0 Linked to low confidence BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA With other complex events 16 0.02 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 X 48485276 153232027 1 15 463 1 3 1 1 9 0.57 0.59 18 0 0 18 9 18 18 9 9 40.96 58.21 38.4 1 2 1 Whitelist BRCA-US 5 0.68 0.81 0 0 0.64 0 No BRCA-US a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 BRCA 0.51 2.1 Breast-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578236_T_A,CN:1 2 BRCA-US DO3182 TCGA-C8-A12Q a824b3bd-34d5-4cc1-a92f-f9d6ac0f1814 female alive C50.9 78 NA 2 NA Included Breast-AdenoCA BRCA US 0 0.07 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 1 168958353 179880233 2 2 460 1 0 1 0 0 0.57 0.3 12 0 0 12 3 4 84 6 8 65.18 82.15 14.32 0 2 3 Whitelist BRCA-US 0.68 0.54 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 2 238788263 238894945 2 2 460 0 0 1 1 0 0.57 0.18 4 0 0 4 3 4 84 6 9 65.18 81.93 15.37 0 4 1 Whitelist BRCA-US 0.68 0.39 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 3 41417844 164490641 1 10 460 4 1 1 0 4 0.11 0.01 49 0 0 49 8 14 87 8 10 65.18 72.57 27.42 3 2 3 Whitelist BRCA-US 0.68 0.05 0 0 0.48 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 4 152882789 184110352 1 1 460 0 0 1 0 0 0.39 0.05 3 0 0 NA NA NA 30 4 9 65.18 84.41 13.02 0 1 2 Whitelist BRCA-US 0.62 0.16 0 0 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 5 131216945 131236881 1 1 460 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 24 7 9 65.18 30.62 66.72 0 2 NA Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 6 11059919 157476199 1 7 460 3 2 0 0 2 0.14 0.11 50 0 0 50 6 13 53 7 12 65.18 69.55 30.28 1 3 2 Whitelist BRCA-US 3 0.54 0.3 0 0 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 7 20486849 151834107 1 12 460 2 2 1 1 6 0.88 0.02 65 0 0 65 6 12 72 6 12 65.18 90.63 6.72 0 3 4 Whitelist BRCA-US 0.93 0.07 0 0 0.91 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 8 63227110 131599267 10 14 460 3 2 3 2 4 0.94 0 173 0 0 173 6 8 206 6 9 65.18 96.22 0.36 4 7 8 Whitelist BRCA-US 0.68 0 0 0 0.96 0 Low confidence BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA With other complex events 24 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 9 21959462 21981001 1 1 460 1 0 0 0 0 0.39 0.28 2 0 NA NA NA NA 35 9 11 65.18 51.19 45.7 0 1 2 Whitelist BRCA-US 0.62 0.52 0 NA 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 10 26999933 80622521 1 5 460 1 2 1 1 0 0.9 0.43 15 0 0 15 3 6 25 3 5 65.18 53.23 43.19 0 3 2 Whitelist BRCA-US 0.93 0.68 0 0 0.92 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 11 4953622 116683398 1 8 460 2 2 0 0 4 0.26 0.38 38 0 0 38 5 17 44 7 11 65.18 38.13 58.41 1 2 3 Whitelist BRCA-US 0.62 0.63 0 0 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 12 NA NA 0 0 460 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 28 4 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.19 0 NA NA 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 13 78827924 111031100 1 2 460 1 1 0 0 0 0.57 0.04 6 0 0 6 5 6 13 11 11 65.18 37.16 62.84 0 2 1 Whitelist BRCA-US 0.68 0.14 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 14 30828953 100376768 1 8 460 2 1 0 1 4 0.57 0.69 27 0 0 27 5 5 31 5 5 65.18 42.01 42.08 3 2 1 Whitelist BRCA-US 0.87 0.89 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 15 41844569 91072935 1 4 460 3 1 0 0 0 0.11 0.32 24 0 0 24 4 8 32 7 8 65.18 75.83 19.26 0 1 2 Whitelist BRCA-US 0.54 0.57 0 0 0.48 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 16 21565644 21604085 1 1 460 1 0 0 0 0 0.39 0.88 1 0 NA NA NA NA 16 5 5 65.18 86.77 12.91 0 3 NA Whitelist BRCA-US 0.62 1 0 NA 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 17 NA NA 0 0 460 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 12 3 7 0 0 0 0 0 0 Whitelist BRCA-US NA 0.19 0 NA NA 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 18 32730255 39263051 1 2 460 0 0 0 1 1 0.39 0.15 4 0 NA 4 3 4 13 9 9 65.18 31.89 63.49 0 2 1 Whitelist BRCA-US 0.68 0.35 0 NA 0.59 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 3 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 19 39599427 39903722 2 2 460 0 0 1 1 0 0.57 0.24 3 0 0 NA NA NA 14 6 11 65.18 77.14 15.49 0 3 4 Whitelist BRCA-US 0.68 0.47 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 20 31962446 32208071 1 2 460 2 0 0 0 0 0.11 1 4 0 0 4 3 4 19 5 10 65.18 90.88 1.32 0 2 3 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 21 NA NA 0 0 460 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.64 NA NA NA 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 22 NA NA 0 0 460 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 7 0 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.41 NA NA NA 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::a9b7d7fe-be31-4f71-afee-c1bfdf511888 X 147381416 147412281 2 2 460 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 6 4 4 65.18 93.55 6.23 0 1 2 Whitelist BRCA-US 0.68 0.17 0 0 0.64 0 No BRCA-US a9b7d7fe-be31-4f71-afee-c1bfdf511888 BRCA 0.47 2.76 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 1 BRCA-US DO1559 TCGA-AO-A0J4 a9b7d7fe-be31-4f71-afee-c1bfdf511888 female alive C50.9 41 NA 294 NA Included Breast-AdenoCA BRCA US 0 9.67 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 1 NA NA 0 0 117 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.24 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 2 NA NA 0 0 117 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 3 NA NA 0 0 117 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.35 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 4 NA NA 0 0 117 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.61 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 5 NA NA 0 0 117 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.17 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 6 NA NA 0 0 117 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.89 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 7 NA NA 0 0 117 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.09 NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 8 NA NA 0 0 117 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 13 5 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.04 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 9 NA NA 0 0 117 0 0 0 0 0 NA 0.63 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.84 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 10 NA NA 0 0 117 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 11 60548886 62740955 1 1 117 0 1 0 0 0 0.39 0.12 2 0 NA NA NA NA 5 3 3 9.04 3.61 92.93 0 2 3 Whitelist BRCA-US 0.62 0.31 0 NA 0.59 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 12 NA NA 0 0 117 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.96 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 13 NA NA 0 0 117 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 14 NA NA 0 0 117 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.52 NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 15 NA NA 0 0 117 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 16 31185494 33658067 1 1 117 0 0 1 0 0 0.39 0.77 1 NA NA NA NA NA 4 3 3 9.04 95.48 0 0 4 NA Whitelist BRCA-US 0.62 0.93 NA NA 0.59 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 2 0.01 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 17 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 18 23409571 39483311 11 13 117 3 2 4 2 2 0.8 0 13 0 0 13 13 13 17 16 16 9.04 65.08 34.88 0 2 3 Whitelist BRCA-US 0.9 0 0 0 0.84 1 High confidence BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA Canonical without polyploidization 24 0.1 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 19 NA NA 0 0 117 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 20 NA NA 0 0 117 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 21 NA NA 0 0 117 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.39 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 22 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 X NA NA 0 0 117 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.07 0 NA NA 1 No BRCA-US aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 BRCA 0.77 2.2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO2084 TCGA-BH-A0H6 aeb6a3a6-b57a-4c53-90e6-e833777dd2a1 female alive C50.9 82 NA 747 NA Included Breast-AdenoCA BRCA US 0 24.57 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 1 3498809 247725333 6 31 763 0 1 2 3 25 0.34 0 54 0 0 54 11 11 54 11 11 52.67 69.08 27.95 0 3 2 Whitelist BRCA-US 10_12_18_2_20_3 0.76 0.02 0 0 0.59 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 37 0.02 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 False positive; manually removed BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 2 9334743 209562258 2 23 763 1 2 0 1 19 0.57 0.01 44 0 0 44 7 13 52 7 7 52.67 69.83 27.07 4 3 4 Whitelist BRCA-US 1_10_12_18_3 0.62 0.03 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 27 0.02 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 3 4164393 197488086 1 45 763 2 24 0 0 19 0 0.05 47 0 0 47 7 17 48 7 18 52.67 42.68 54.15 0 7 6 Whitelist BRCA-US 1_12_2_4_7 0 0.16 0 0 0 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 71 0.05 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 4 20141203 160134617 1 11 763 2 6 0 1 2 0.03 0 10 0 0 10 6 10 13 6 6 52.67 63.14 36.63 0 2 3 Whitelist BRCA-US 3 0.34 0 0 0 0.33 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 20 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 5 15637251 171706982 1 24 763 5 13 0 0 6 0 0.12 40 0 0 40 7 11 40 7 11 52.67 30.06 67.27 0 3 2 Whitelist BRCA-US 2_8 0.21 0.3 0 0 0 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 42 0.03 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 6 107054725 113512450 22 24 763 5 6 3 8 2 0.5 0 32 0 0 32 4 4 103 8 11 52.67 92.11 7.66 10 11 13 Whitelist BRCA-US 0.62 0 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 46 0.03 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 7 31636190 151854819 5 18 763 2 1 1 1 13 0.9 0 28 0 0 28 7 11 43 7 11 52.67 74.14 25.63 5 4 3 Whitelist BRCA-US 12_15 0.5 0 0 0 0.92 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 23 0.02 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 False positive; manually removed BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 8 3931231 30860702 4 4 763 0 1 2 1 0 0.57 0.25 7 0 0 7 7 7 29 7 8 52.67 55.17 44.72 0 1 2 Whitelist BRCA-US 0.68 0.49 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 8 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 9 71374858 72890109 7 12 763 3 1 2 1 5 0.67 0.02 6 0 0 6 4 5 34 6 7 52.67 43.96 55.91 0 3 7 Whitelist BRCA-US 0.68 0.08 0 0 0.74 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 19 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 10 84390295 134360315 1 8 763 2 3 0 0 3 0.14 0.8 13 0 0 13 5 13 26 8 14 52.67 56.72 39.33 0 2 3 Whitelist BRCA-US 2 0.87 0.95 0 0 0.59 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 13 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 11 47945498 62620686 2 2 763 0 1 1 0 0 0.57 0.86 4 0 0 4 4 4 29 8 8 52.67 46.04 49.94 0 2 3 Whitelist BRCA-US 0.68 1 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 12 62348764 100607994 2 4 763 0 1 0 1 2 0.57 0.01 5 0 0 5 5 5 38 7 13 52.67 39.33 60.38 0 2 3 Whitelist BRCA-US 7 0.68 0.04 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 6 0 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 13 39492103 102162826 2 4 763 0 1 1 2 0 0.57 0.07 8 0 0 8 3 5 10 3 5 52.67 16.47 83.22 0 2 0 Whitelist BRCA-US 0.68 0.21 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 8 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 14 73298911 75888308 2 3 763 0 0 1 1 1 0.57 0.06 2 0 0 NA NA NA 12 5 6 52.67 17.21 81.88 0 2 4 Whitelist BRCA-US 17 0.87 0.19 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 5 0 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 15 84737922 102193577 1 8 763 0 1 1 1 5 0.8 0.44 7 0 0 7 4 5 10 5 5 52.67 96.02 3.88 0 3 4 Whitelist BRCA-US 7 0.87 0.69 0 0 0.84 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 11 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 16 2501874 90049603 1 29 763 2 10 0 0 17 0 0 41 0 0 41 6 8 42 6 8 52.67 34.37 65.2 0 2 5 Whitelist BRCA-US 1_8 0.1 0 0 0 0.01 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 41 0.03 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 17 3223302 73667231 1 19 763 1 5 0 0 13 0.01 0.03 22 0 0 22 6 11 23 6 6 52.67 58.75 36.82 0 3 2 Whitelist BRCA-US 12 0.21 0.1 0 0 0.19 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 25 0.02 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 18 701058 54131139 1 18 763 2 10 1 0 5 0 0.07 27 0 0 27 7 7 33 7 9 52.67 99.93 0.01 4 4 7 Whitelist BRCA-US 1_2 0.21 0.21 0 0 0.02 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 31 0.02 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 19 10715342 41599543 1 7 763 1 5 0 0 1 0.01 1 11 0 0 11 4 8 13 5 5 52.67 57.73 35 0 3 4 Whitelist BRCA-US 0.47 1 0 0 0.19 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 13 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 20 4240904 56044213 1 16 763 1 4 1 0 10 0.11 0.02 16 0 0 16 5 7 18 7 9 52.67 40.75 52.12 0 2 3 Whitelist BRCA-US 1_10_21 0.62 0.09 0 0 0.48 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 22 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 21 18029493 41296820 1 7 763 1 2 0 0 4 0.3 0.74 6 0 0 6 4 6 8 5 5 52.67 6.42 70.93 0 2 1 Whitelist BRCA-US 20 0.96 0.91 0 0 0.59 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 10 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c 22 23256864 38987318 1 8 763 1 2 0 0 5 0.3 0.06 7 0 0 7 4 5 10 4 7 52.67 70.93 29.07 0 3 2 Whitelist BRCA-US 1_3 1 0.19 0 0 0.59 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 11 0.01 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b094e8b2-8ece-4b36-8025-18073a8b873c X 91099712 99928244 2 2 763 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 16 5 8 52.67 31.35 65.26 0 1 NA Whitelist BRCA-US 0.68 0.18 0 0 0.64 0 No BRCA-US b094e8b2-8ece-4b36-8025-18073a8b873c BRCA 0.82 2.81 Breast-AdenoCA NA 4 0 NA 2 BRCA-US DO1287 TCGA-AO-A124 b094e8b2-8ece-4b36-8025-18073a8b873c female alive C50.9 38 NA 3120 NA Included Breast-AdenoCA BRCA US 0 102.63 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 3 NA NA 0 0 6 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.19 NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 4 NA NA 0 0 6 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.59 NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 7 NA NA 0 0 6 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.53 NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 8 96469148 107864737 1 1 6 0 0 1 0 0 0.39 0.27 3 NA NA NA NA NA 4 4 4 90.64 73.36 26.63 0 2 3 Whitelist BRCA-US 0.62 0.51 NA NA 0.59 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 2 0.17 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 13 NA NA 0 0 6 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.07 NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 14 37726281 37979657 1 1 6 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 90.64 99.08 0 0 4 5 Whitelist BRCA-US 0.62 0.39 NA NA 0.59 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 2 0.17 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b2aac45b-2073-4c7a-adb9-769a4fdcc111 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b2aac45b-2073-4c7a-adb9-769a4fdcc111 BRCA 0.53 3.69 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO1290 TCGA-E9-A1NH b2aac45b-2073-4c7a-adb9-769a4fdcc111 female alive C50.9 71 NA 0 NA Included Breast-AdenoCA BRCA US 0 0 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 1 40038162 232707532 1 6 296 2 0 1 0 3 0.3 0 9 0 0 9 4 9 10 5 5 80.07 99.98 0.02 7 3 4 Whitelist BRCA-US 0.93 0.01 0 0 0.59 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 9 0.02 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 2 9513684 64192182 1 16 296 2 1 1 0 12 0.57 0.46 13 0 0 13 5 13 22 8 15 80.07 80.94 16.38 0 2 3 Whitelist BRCA-US 9 0.79 0.71 0 0 0.64 1 Linked to high confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 20 0.03 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 3 NA NA 0 0 296 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 4 57534255 78929510 1 17 296 2 1 1 0 13 0.57 0.91 11 0 0 11 4 9 14 5 10 80.07 90.99 8.82 0 5 3 Whitelist BRCA-US 20_22 0.68 1 0 0 0.64 1 Linked to high confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 21 0.04 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 5 NA NA 0 0 296 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 6 27405701 119285032 6 8 296 3 0 1 2 2 0.34 0.27 5 0 0 5 3 5 5 3 5 80.07 95.77 1.37 11 4 2 Whitelist BRCA-US 0.62 0.51 0 0 0.59 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 14 0.02 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 7 42063804 42096556 1 1 296 0 0 0 1 0 0.39 0 2 0 NA NA NA NA 6 0 0 80.07 73.63 26.15 0 14 22 Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 8 70930992 88123273 5 13 296 1 1 2 1 8 0.9 0 15 0 0 15 5 7 28 5 5 80.07 71.48 28.52 2 15 4 Whitelist BRCA-US 0.68 0.02 0 0 0.92 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 18 0.03 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 9 86410803 134980826 5 17 296 1 1 3 0 12 0.28 0.01 15 0 0 15 7 10 18 7 11 80.07 86.47 12.78 0 2 3 Whitelist BRCA-US 2 0.87 0.05 0 0 0.59 1 High confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 22 0.04 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 10 6867995 30890977 15 19 296 5 3 4 3 4 0.87 0 27 0 0 27 13 19 33 15 21 80.07 96.52 0 0 7 8 Whitelist BRCA-US 1 0.01 0 0 0.9 1 High confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 34 0.06 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 11 55581976 79948001 15 31 296 3 4 4 4 16 0.98 0 37 0 0 37 4 6 39 4 6 80.07 48.63 47.88 5 2 4 Whitelist BRCA-US 22 0.76 0 0 0 0.99 1 Low confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 46 0.08 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 12 123445141 123719299 1 1 296 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 80.07 99.71 0.2 0 2 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 13 NA NA 0 0 296 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 14 NA NA 0 0 296 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 15 NA NA 0 0 296 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 16 87130871 89108862 2 4 296 0 1 0 1 2 0.57 0.15 6 0 0 6 6 6 13 6 6 80.07 10.23 85.02 0 2 6 Whitelist BRCA-US 1 0.34 0 0 0.64 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 6 0.01 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 17 26793465 79998471 49 66 296 13 12 13 11 17 0.97 0 64 0 0 64 4 7 74 9 9 80.07 60.97 34.48 21 5 7 Whitelist BRCA-US 19 0.99 0 0 0 0.98 1 Low confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 115 0.19 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 18 NA NA 0 0 296 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 19 48961354 58347531 7 9 296 2 3 0 2 2 0.44 0 15 0 0 15 8 8 22 8 8 80.07 92.02 0 0 8 9 Whitelist BRCA-US 0.62 0 0 0 0.64 1 High confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 16 0.03 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 20 4186490 34159090 14 28 296 3 1 6 4 14 0.29 0 19 0 0 19 5 8 20 5 8 80.07 92.89 0 12 3 4 Whitelist BRCA-US 22 0.98 0 0 0 0.59 1 Low confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 42 0.07 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 21 NA NA 0 0 296 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 22 24093006 30283046 3 15 296 0 1 1 1 12 0.8 0 13 0 0 13 7 7 23 7 7 80.07 72.93 27.07 0 4 3 Whitelist BRCA-US 20 0.62 0 0 0 0.84 1 High confidence BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA With other complex events 18 0.03 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b43e41af-1d82-4b5f-b8f1-add0510e6b86 X 21879056 24261690 1 1 296 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 8 3 5 80.07 96.61 0 0 3 4 Whitelist BRCA-US 0.62 0.12 0 NA 0.59 1 No BRCA-US b43e41af-1d82-4b5f-b8f1-add0510e6b86 BRCA 0.72 4.04 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578409_-_CTCACAACCTCCGTCATGTGCTGTGACTG,CN:2 4 BRCA-US DO2539 TCGA-A8-A07B b43e41af-1d82-4b5f-b8f1-add0510e6b86 female alive C50.9 69 NA 1004 NA Included Breast-AdenoCA BRCA US 0 33.03 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 1 146573098 221175673 2 9 518 1 1 0 0 7 0.57 0.02 27 0 0 27 4 9 73 7 12 57.08 79.19 17.84 0 5 3 Whitelist BRCA-US 2 0.54 0.07 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 2 52994113 239449704 1 19 518 1 3 2 0 13 0.34 0.01 49 0 0 49 16 18 61 16 18 57.08 84.68 15.23 0 4 3 Whitelist BRCA-US 15_4 0.62 0.05 0 0 0.59 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 25 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 3 1581420 190300550 1 16 518 0 1 1 2 12 0.57 1 28 0 0 28 4 7 32 4 7 57.08 39.54 60.34 0 5 2 Whitelist BRCA-US 10_12_X 0.95 1 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 20 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 4 36950273 186659118 1 16 518 4 2 1 1 8 0.39 0.86 28 0 0 28 7 9 32 7 11 57.08 80.74 16.88 0 3 6 Whitelist BRCA-US 18_2 0.54 0.99 0 0 0.59 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 24 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 5 10601014 118950193 1 7 518 0 2 1 1 3 0.57 0.04 8 0 0 8 3 5 18 4 9 57.08 28.58 68.76 0 3 4 Whitelist BRCA-US 0.68 0.13 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 6 76324649 88192764 2 2 518 0 0 1 1 0 0.57 0.58 6 0 0 6 3 6 36 6 10 57.08 49.53 47.34 0 2 3 Whitelist BRCA-US 0.68 0.8 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 4 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 7 66135599 95855289 1 3 518 0 2 0 0 1 0.11 0.56 3 0 0 NA NA NA 7 0 3 57.08 62.78 36.99 0 2 3 Whitelist BRCA-US 0.41 0.78 0 0 0.48 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 5 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 8 104921847 108603422 4 5 518 0 1 1 2 1 0.57 0 6 0 0 6 4 6 45 7 7 57.08 74.16 25.72 0 6 7 Whitelist BRCA-US 0.93 0 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 9 4845278 126061906 1 21 518 0 6 0 0 15 0 0.02 27 0 0 27 4 9 32 4 10 57.08 78.99 18.46 0 5 4 Whitelist BRCA-US 10_11 0.58 0.09 0 0 0.03 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 27 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 10 61540502 75608353 1 2 518 0 2 0 0 0 0.11 0.53 10 0 0 10 4 10 20 5 16 57.08 24.15 75.67 0 2 3 Whitelist BRCA-US 0.54 0.76 0 0 0.48 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 4 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 11 1143256 131778845 1 17 518 2 7 1 1 6 0.03 0.3 30 0 0 30 13 24 31 13 13 57.08 38.99 57.55 0 3 2 Whitelist BRCA-US 0.62 0.54 0 0 0.33 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 28 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 12 13881081 132289604 1 19 518 1 5 0 1 12 0.04 0.04 19 0 0 19 7 11 28 7 11 57.08 56.75 39.51 1 4 2 Whitelist BRCA-US 13_X 0.72 0.13 0 0 0.38 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 26 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 13 37442397 93491062 1 10 518 1 2 0 0 7 0.3 0.15 14 0 0 14 5 12 22 5 13 57.08 81.56 18.44 0 2 4 Whitelist BRCA-US 15 0.62 0.35 0 0 0.59 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 14 41190334 51580483 1 4 518 1 1 0 0 2 0.57 0.8 4 0 0 4 3 4 7 3 5 57.08 0.04 99.05 0 2 1 Whitelist BRCA-US 0.62 0.95 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 15 33755967 94821622 2 8 518 1 1 0 0 6 0.57 0.23 16 0 0 16 9 10 22 9 11 57.08 77.65 22.25 0 2 4 Whitelist BRCA-US 13_2 0.68 0.46 0 0 0.64 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 16 8976181 26454747 1 6 518 0 1 1 1 3 0.8 0 10 0 0 10 4 4 23 5 7 57.08 85.13 14.78 0 2 4 Whitelist BRCA-US 0.68 0 0 0 0.84 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 17 6922685 80290664 1 6 518 1 2 0 0 3 0.3 0.34 4 0 0 4 3 4 9 4 5 57.08 8.64 90.24 0 2 4 Whitelist BRCA-US 0.62 0.59 0 0 0.59 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 18 20248444 50278950 3 7 518 0 1 1 1 4 0.8 0 8 0 0 8 7 8 22 7 7 57.08 94.83 0 0 8 7 Whitelist BRCA-US 13_15 0.77 0 0 0 0.84 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 False positive; manually removed BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 19 5622694 7165542 3 4 518 0 1 1 1 1 0.8 0.01 6 0 0 6 4 5 16 5 7 57.08 49.2 43.61 0 3 5 Whitelist BRCA-US 0.68 0.05 0 0 0.84 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 20 1840752 61984644 1 12 518 0 2 0 0 10 0.11 0.09 7 0 0 7 3 5 8 3 4 57.08 52.75 40.19 7 4 2 Whitelist BRCA-US 11_4_X 0.54 0.25 0 0 0.48 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 21 NA NA 0 0 518 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.27 NA NA NA 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a 22 24474599 24492018 1 2 518 0 0 0 1 1 0.39 0 1 0 NA NA NA NA 9 3 7 57.08 89.3 10.7 0 4 NA Whitelist BRCA-US 0.68 0 0 NA 0.59 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 3 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b58ad350-5140-4fa8-bc2c-24bca8395f3a X 7623093 146982746 1 15 518 1 4 0 0 10 0.04 0.84 30 0 0 30 5 8 31 5 8 57.08 59.91 36.93 0 3 4 Whitelist BRCA-US 12 0.73 0.98 0 0 0.36 0 No BRCA-US b58ad350-5140-4fa8-bc2c-24bca8395f3a BRCA 0.65 3.24 Breast-AdenoCA NA 20 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578226_C_T,CN:2 4 BRCA-US DO5696 TCGA-A2-A04T b58ad350-5140-4fa8-bc2c-24bca8395f3a female alive C50.9 62 NA 1950 NA Included Breast-AdenoCA BRCA US 0 64.14 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 2 NA NA 0 0 8 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.34 NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 3 50137735 50345802 1 1 8 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 0.05 0.11 99.77 0 2 4 Whitelist BRCA-US 0.62 0.69 NA NA 0.59 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 2 0.12 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 4 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 14 37825724 38198900 1 1 8 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA 4 3 4 0.05 0.35 95.94 0 2 3 Whitelist BRCA-US 0.62 0.46 NA NA 0.59 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 2 0.12 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 19 49845484 50181543 1 1 8 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 0.05 0 99.83 0 2 NA Whitelist BRCA-US 0.62 0.35 NA NA 0.59 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 2 0.12 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 20 NA NA 0 0 8 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.05 NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df 22 36711977 37064770 1 1 8 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 0.05 0.69 99.31 0 2 3 Whitelist BRCA-US 0.62 0.25 NA NA 0.59 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 2 0.12 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b5b99291-507e-4b68-a039-9a0f571f55df X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US b5b99291-507e-4b68-a039-9a0f571f55df BRCA 0.81 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3158 TCGA-AO-A12H b5b99291-507e-4b68-a039-9a0f571f55df female alive C50.9 69 NA 863 NA Included Breast-AdenoCA BRCA US 0 28.39 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 1 2468572 121208979 54 54 194 19 12 14 9 0 0.27 0 99 0 0 99 8 13 141 8 8 77.47 82.5 14.42 9 3 5 Whitelist BRCA-US 0.62 0 0 0 0.59 1 High confidence BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA With other complex events 108 0.28 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 2 144237516 152594508 2 2 194 0 2 0 0 0 0.11 0.07 5 0 0 5 5 5 21 9 9 77.47 96.85 0.47 0 3 2 Whitelist BRCA-US 0.54 0.2 0 0 0.48 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 3 59665300 60541878 3 3 194 1 1 1 0 0 0.8 1 6 0 0 6 3 6 15 5 5 77.47 99.88 0 0 4 3 Whitelist BRCA-US 0.87 1 0 0 0.84 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 4 976583 166076230 1 8 194 1 2 1 1 3 0.9 0.31 14 0 0 14 5 7 14 5 5 77.47 97.5 0.13 0 3 4 Whitelist BRCA-US 5 0.87 0.56 0 0 0.92 1 Linked to low confidence BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA With other complex events 13 0.03 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 5 8856070 26153658 6 6 194 2 0 2 2 0 0.57 0.55 13 0 0 13 6 8 19 7 8 77.47 81.02 16.32 1 3 4 Whitelist BRCA-US 0.68 0.78 0 0 0.64 1 Low confidence BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA With other complex events 12 0.03 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 6 13988669 116150171 3 6 194 1 1 2 2 0 0.88 0.76 9 0 0 9 8 9 11 8 8 77.47 97.07 0 0 5 6 Whitelist BRCA-US 0.93 0.93 0 0 0.91 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 12 0.03 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 7 73881052 74123614 2 2 194 1 1 0 0 0 0.57 0.11 4 0 0 4 0 3 15 5 5 77.47 97.25 0 0 1 3 Whitelist BRCA-US 0.68 0.28 0 0 0.64 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 8 33494004 36238891 3 3 194 1 0 0 2 0 0.3 0.19 6 0 0 6 0 3 24 5 5 77.47 73.03 23.55 0 2 7 Whitelist BRCA-US 0.62 0.41 0 0 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 9 99614649 140173078 1 3 194 1 1 0 0 1 0.57 0.1 5 NA 0 5 3 4 8 3 3 77.47 99.94 0 0 7 4 Whitelist BRCA-US 0.87 0.26 NA 0 0.64 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 10 27069054 121532574 1 6 194 1 3 1 0 1 0.28 1 10 0 0 10 3 7 14 3 5 77.47 96.57 0 1 3 4 Whitelist BRCA-US 0.68 1 0 0 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 11 0.03 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 11 56347560 102274469 1 3 194 3 0 0 0 0 0.03 0.04 5 0 0 5 3 3 7 3 5 77.47 37.77 61.81 5 2 1 Whitelist BRCA-US 0.41 0.13 0 0 0.33 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 6 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 12 98948108 125948092 1 2 194 2 0 0 0 0 0.11 0.01 3 NA 0 NA NA NA 8 6 8 77.47 99.92 0 0 4 5 Whitelist BRCA-US 0.54 0.05 NA 0 0.48 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 13 103283154 103333751 1 1 194 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 77.47 55 45 0 2 NA Whitelist BRCA-US 0.62 0.38 NA NA 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 14 64129359 106682953 1 4 194 0 2 0 1 1 0.3 0.54 7 0 0 7 7 7 10 8 8 77.47 83.14 1.24 0 4 3 Whitelist BRCA-US 0.54 0.77 0 0 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 15 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 16 28889137 89519730 1 2 194 1 1 0 0 0 0.57 0.5 6 0.18 0 6 4 6 7 4 4 77.47 38.67 55.93 0 2 3 Whitelist BRCA-US 0.68 0.74 0.18 0 0.64 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 17 19783593 77942610 1 4 194 2 1 0 1 0 0.57 0.66 10 0 0 10 5 8 17 5 5 77.47 100 0 0 5 4 Whitelist BRCA-US 0.68 0.86 0 0 0.64 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 8 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 18 6969586 7333451 1 1 194 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA 5 0 3 77.47 95.33 0 0 8 NA Whitelist BRCA-US 0.62 0.21 NA NA 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 19 660428 35897293 1 5 194 4 1 0 0 0 0.04 0.29 18 0 0 18 4 7 24 5 6 77.47 90.21 2.52 3 6 4 Whitelist BRCA-US 0.45 0.53 0 0 0.36 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 10 0.03 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 20 9210464 37145197 1 4 194 1 2 0 0 1 0.3 1 9 0 0 9 4 9 10 5 5 77.47 66.18 32.83 0 2 3 Whitelist BRCA-US 0.54 1 0 0 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 7 0.02 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 21 21571549 21585845 1 1 194 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 77.47 77.5 0 0 4 5 Whitelist BRCA-US 0.62 0.91 NA NA 0.59 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 2 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a 22 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::b97bf89a-7a85-4eef-ae7e-f787aead1f0a X 47008654 54867090 1 2 194 0 1 1 0 0 0.57 0.02 5 0 0 5 0 4 7 3 3 77.47 62.06 34.54 0 4 2 Whitelist BRCA-US 0.68 0.08 0 0 0.64 1 No BRCA-US b97bf89a-7a85-4eef-ae7e-f787aead1f0a BRCA 0.47 3.8 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO5661 TCGA-BH-A1FC b97bf89a-7a85-4eef-ae7e-f787aead1f0a female deceased C50.9 78 3472 NA NA Included Breast-AdenoCA BRCA US 1 114.21 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 1 150239597 180719223 38 41 358 11 12 8 7 3 0.62 0 59 0 0 59 9 9 80 13 13 81.07 82.42 17.54 7 6 4 Whitelist BRCA-US 0.68 0 0 0 0.69 1 High confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA With other complex events 79 0.11 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 2 4509988 88587826 39 89 358 12 8 12 7 50 0.55 0 90 0 0 90 90 90 102 91 92 81.07 99.89 0 6 3 4 Whitelist BRCA-US 19_6 0.54 0 0 0 0.64 1 High confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA After polyploidization 128 0.18 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 3 166105643 176738060 8 9 358 2 1 3 2 1 0.8 0.92 13 0 0 13 5 8 30 8 8 81.07 99.88 0.03 3 7 6 Whitelist BRCA-US 0.97 1 0 0 0.84 1 Low confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA With other complex events 17 0.02 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 4 27841850 139714437 1 6 358 0 4 0 0 2 0.01 0 14 0 0 14 9 14 15 9 9 81.07 99.97 0.01 0 3 4 Whitelist BRCA-US 10 0.54 0 0 0 0.16 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 10 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 5 24890499 27872611 1 1 358 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 7 5 5 81.07 97.33 0 0 5 6 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 6 107014877 166856042 23 72 358 2 5 6 10 49 0.13 0 57 0 0 57 37 41 65 37 41 81.07 99.81 0 4 3 4 Whitelist BRCA-US 2 0.04 0 0 0 0.54 1 High confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA After polyploidization 95 0.13 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 7 NA NA 0 0 358 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 8 34853504 43782703 6 14 358 1 1 1 3 8 0.57 0.63 4 0 0 4 3 4 11 4 4 81.07 96.48 0 2 3 4 Whitelist BRCA-US 0.98 0.84 0 0 0.64 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 20 0.03 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 9 3044820 35929074 2 5 358 0 1 2 1 1 0.57 0.68 12 0 0 12 9 12 22 11 14 81.07 69.93 26.9 0 2 3 Whitelist BRCA-US 0.68 0.88 0 0 0.64 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 9 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 10 8958125 24587595 1 3 358 0 3 0 0 0 0.03 0.06 5 0 0 5 5 5 7 5 5 81.07 57.59 39 0 5 6 Whitelist BRCA-US 0.41 0.18 0 0 0.33 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 11 55564718 67319570 1 3 358 0 3 0 0 0 0.03 0 6 0 0 6 5 6 6 5 5 81.07 58.33 37.47 0 3 4 Whitelist BRCA-US 0.41 0 0 0 0.33 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 12 3872354 79549554 1 5 358 0 5 0 0 0 0 0 11 0 0 11 5 11 12 6 6 81.07 99.92 0 0 4 3 Whitelist BRCA-US 0.1 0.01 0 0 0.07 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 10 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 13 19672951 85436017 1 9 358 0 2 0 0 7 0.11 0.47 4 0 0 4 3 4 4 3 3 81.07 70.72 29.28 0 3 2 Whitelist BRCA-US 0.68 0.71 0 0 0.48 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 11 0.02 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 14 32936197 105369365 1 7 358 0 6 0 0 1 0 0.23 13 0 0 13 10 11 14 11 12 81.07 99.09 0 0 3 4 Whitelist BRCA-US 0.13 0.46 0 0 0.03 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 13 0.02 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 15 NA NA 0 0 358 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.09 NA NA NA 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 16 52843008 60692358 1 2 358 0 0 1 1 0 0.57 0.1 1 0 0 NA NA NA 16 4 4 81.07 99.61 0 0 4 NA Whitelist BRCA-US 0.68 0.26 0 0 0.64 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 4 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 17 61633816 73030254 4 10 358 1 2 0 1 6 0.57 0 15 0 0 15 5 5 45 5 7 81.07 37.33 58.19 6 5 2 Whitelist BRCA-US 0.62 0 0 0 0.64 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 14 0.02 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 18 NA NA 0 0 358 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.04 NA NA NA 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 19 12064068 51987942 1 9 358 1 2 1 0 5 0.57 0.13 13 0 0 13 13 13 15 14 14 81.07 78.7 14.02 0 4 3 Whitelist BRCA-US 2 0.62 0.32 0 0 0.64 1 Linked to high confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA After polyploidization 13 0.02 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 20 16232916 16656241 1 1 358 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 81.07 92.75 0 0 6 NA Whitelist BRCA-US 0.62 0.51 NA NA 0.59 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 21 NA NA 0 0 358 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 22 19004440 50133204 10 16 358 2 2 1 5 6 0.31 0 16 0 0 16 5 16 17 6 6 81.07 33.26 66.74 0 3 2 Whitelist BRCA-US 1_3 0.87 0 0 0 0.59 1 Low confidence BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA With other complex events 26 0.04 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c0892598-1f7b-4f23-9cd8-731f797753d5 X 53600880 57627031 3 6 358 1 0 2 0 3 0.3 0.55 5 0 0 5 4 5 14 7 7 81.07 64.37 32.24 0 3 4 Whitelist BRCA-US 0.93 0.77 0 0 0.59 1 No BRCA-US c0892598-1f7b-4f23-9cd8-731f797753d5 BRCA 0.61 3.55 Breast-AdenoCA NA 9 0.01 NA 4 BRCA-US DO4036 TCGA-A2-A0YG c0892598-1f7b-4f23-9cd8-731f797753d5 female alive C50.9 63 NA 404 NA Included Breast-AdenoCA BRCA US 0 13.29 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 1 106517008 115706698 1 1 397 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 22.95 3.69 96.31 1 1 2 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 2 NA NA 0 0 397 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 3 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 4 NA NA 0 0 397 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 5 NA NA 0 0 397 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 6 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 7 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 8 NA NA 0 0 397 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 8 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.67 0 NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 9 118882797 126857002 1 2 397 0 1 0 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 22.95 0 97.37 0 2 NA Whitelist BRCA-US 0.68 0 NA 0 0.64 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 10 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 11 10924677 42445854 1 3 397 1 1 0 1 0 0.8 0 5 0 0 5 3 5 6 4 4 22.95 20.66 78.91 11 2 1 Whitelist BRCA-US 0.87 0 0 0 0.84 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 12 56913152 101125708 50 124 397 10 13 13 14 74 0.87 0 81 0 0 81 5 8 82 5 9 22.95 71.14 25.12 53 11 9 Whitelist BRCA-US 16_20 0.85 0 0 0 0.91 1 Low confidence BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA With other complex events 174 0.22 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 13 33708275 41626291 1 12 397 2 1 0 0 9 0.3 0.78 7 0 0 7 4 4 7 4 4 22.95 97.56 2.44 0 1 2 Whitelist BRCA-US 20 0.68 0.94 0 0 0.59 1 Linked to low confidence BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA With other complex events 15 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 14 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 15 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 16 5415371 33325043 25 50 397 3 9 6 7 25 0.39 0 38 0 0 38 7 13 41 7 13 22.95 29.69 65.78 26 3 4 Whitelist BRCA-US 12_20 0.82 0 0 0 0.59 1 High confidence BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA With other complex events 75 0.09 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 17 30926374 38439380 27 41 397 6 6 9 6 14 0.8 0 27 0 0 27 3 4 41 5 5 22.95 54.4 45.59 10 9 1 Whitelist BRCA-US 0.81 0 0 0 0.84 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 68 0.09 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 18 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 19 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 20 24138933 61546429 87 196 397 25 20 23 19 109 0.79 0 148 0 0 148 5 7 150 5 7 22.95 57.52 41.52 68 8 4 Whitelist BRCA-US 12_16 0.62 0 0 0 0.84 1 Low confidence BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA With other complex events 283 0.36 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 21 NA NA 0 0 397 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d 22 50235043 51159608 2 14 397 0 3 1 0 10 0.11 0 7 0 0 7 3 7 24 6 11 22.95 51.43 48.29 0 3 4 Whitelist BRCA-US 20 0.68 0 0 0 0.48 1 Linked to low confidence BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA With other complex events 18 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::c364e81c-eb1e-4870-ab37-9c661f5f2e3d X 101972018 102063016 1 1 397 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 22.95 1.8 97.97 1 1 2 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US c364e81c-eb1e-4870-ab37-9c661f5f2e3d BRCA 0.41 2.02 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 4 BRCA-US DO1663 TCGA-AR-A0TX c364e81c-eb1e-4870-ab37-9c661f5f2e3d female alive C50.9 64 NA 15 NA Included Breast-AdenoCA BRCA US 0 0.49 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 1 8031173 227527811 3 10 936 0 1 1 1 7 0.8 0.95 48 0 0 48 5 7 57 5 11 63.63 97.06 2.94 1 3 4 Whitelist BRCA-US 7 0.68 1 0 0 0.84 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 13 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 2 30492069 242512963 1 26 936 2 14 0 0 10 0 0.44 86 0 0 86 8 11 91 8 11 63.63 96.9 3.01 0 3 4 Whitelist BRCA-US 4_7 0 0.69 0 0 0 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 42 0.02 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 3 177415460 178787846 3 4 936 1 0 0 2 1 0.3 0 7 0 0 7 3 5 106 6 12 63.63 61.81 34.87 0 49 82 Whitelist BRCA-US 0.54 0 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 7 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 4 19803347 158797788 2 16 936 0 0 2 0 14 0.11 0.01 67 0 0 67 5 11 84 5 11 63.63 76.79 23.19 0 4 5 Whitelist BRCA-US 2_7 0.54 0.05 0 0 0.48 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 18 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 5 11957267 95790571 1 12 936 2 5 0 0 5 0.02 0.2 33 0 0 33 5 7 50 5 8 63.63 60.13 37.21 0 3 2 Whitelist BRCA-US 6_9 0.54 0.42 0 0 0.33 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 19 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 6 16147315 168229735 1 25 936 2 9 0 0 14 0 0 98 0 0 98 5 8 105 6 8 63.63 72.47 24.47 1 5 8 Whitelist BRCA-US 11_5_7 0.04 0 0 0 0.02 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 36 0.02 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 7 7932046 156250631 1 20 936 3 4 0 0 13 0.06 0.17 48 0 0 48 6 10 50 6 10 63.63 85.61 11.78 0 4 3 Whitelist BRCA-US 1_4_6 0.96 0.38 0 0 0.48 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 27 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 8 66748654 67060703 2 2 936 0 0 1 1 0 0.57 0.04 2 0 0 NA NA NA 49 5 10 63.63 87.62 8.86 0 4 6 Whitelist BRCA-US 0.68 0.13 0 0 0.64 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 9 33886633 125598242 1 7 936 2 3 0 0 2 0.14 0.21 33 0 0 33 5 12 56 7 12 63.63 68.2 29.28 0 6 4 Whitelist BRCA-US 0.54 0.43 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 12 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 10 3783621 72424149 1 8 936 3 3 0 0 2 0.11 0.7 34 0 0 34 6 12 48 6 12 63.63 67.51 29.02 3 4 3 Whitelist BRCA-US 0.68 0.89 0 0 0.48 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 14 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 11 295491 102672483 1 10 936 0 5 0 0 5 0 0.64 49 0 0 49 7 11 51 7 8 63.63 42.89 53.92 0 4 2 Whitelist BRCA-US 6 0.3 0.85 0 0 0.07 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 15 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 12 6053958 93616357 1 15 936 0 4 0 0 11 0.01 0.06 56 0 0 56 4 11 64 4 11 63.63 47.32 48.94 0 4 3 Whitelist BRCA-US 0.68 0.19 0 0 0.16 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 19 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 13 48931885 48965459 1 1 936 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA 7 4 4 63.63 33.35 63.79 0 2 6 Whitelist BRCA-US 0.62 0.06 0 NA 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 14 21202889 103155005 1 14 936 1 7 0 0 6 0 0.85 33 0 0 33 5 10 38 5 10 63.63 57.91 38.45 0 4 2 Whitelist BRCA-US 21 0.49 0.99 0 0 0.04 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 22 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 15 NA NA 0 0 936 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 16 13796323 89824614 1 12 936 3 3 2 0 4 0.39 0.92 23 0 0 23 6 13 23 6 7 63.63 78.68 20.64 0 4 2 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 20 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 17 58717154 80393140 1 14 936 1 2 0 1 10 0.57 0.55 24 0 0 24 3 5 29 3 5 63.63 29.16 70.65 0 7 6 Whitelist BRCA-US 1_9_X 0.9 0.77 0 0 0.64 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 18 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 18 24167824 25591080 1 1 936 0 1 0 0 0 0.39 0 3 0 0 NA NA NA 8 5 5 63.63 38.77 61.19 0 2 3 Whitelist BRCA-US 0.62 0 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 19 13567943 55673357 1 11 936 2 4 0 1 4 0.17 0.08 23 0 0 23 4 5 28 4 4 63.63 89.68 3.04 0 6 7 Whitelist BRCA-US 0.62 0.22 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 18 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 20 2672167 62585126 1 12 936 1 2 0 0 9 0.3 0.5 14 0 0 14 5 7 14 5 5 63.63 64.27 34.98 0 4 2 Whitelist BRCA-US 1_6 0.54 0.74 0 0 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 15 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 21 17560637 27139672 2 2 936 0 0 1 1 0 0.57 0 34 0 0 34 10 13 42 10 13 63.63 57 13.76 0 9 6 Whitelist BRCA-US 0.68 0.01 0 0 0.64 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 4 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 22 29679015 29731006 1 1 936 0 1 0 0 0 0.39 0.03 1 0 NA NA NA NA 4 3 3 63.63 88.87 0.02 0 3 NA Whitelist BRCA-US 0.62 0.12 0 NA 0.59 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 X 67595823 135499616 1 8 936 0 5 0 0 3 0 0.37 17 0 0 17 11 17 33 11 20 63.63 26.05 73.73 0 2 3 Whitelist BRCA-US 0.28 0.62 0 0 0.07 0 No BRCA-US ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 BRCA 0.89 3.26 Breast-AdenoCA NA 13 0.01 frameshift_deletion,17_7579364_-_C,CN:2 2 BRCA-US DO4963 TCGA-A2-A04P ccd4a24b-d8cc-4686-9dee-c98b0c5a8d21 female deceased C50.9 36 548 NA NA Included Breast-AdenoCA BRCA US 1 18.03 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 1 10197061 240751611 1 36 546 6 14 0 1 15 0 0.01 48 0 0 48 10 10 49 10 10 69.24 99.6 0.4 0 4 6 Whitelist BRCA-US 3_7 0.03 0.06 0 0 0.01 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 57 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 2 6059598 203121904 6 17 546 0 2 2 2 11 0.57 0.44 35 0 0 35 6 9 35 6 9 69.24 87.19 12.69 0 5 4 Whitelist BRCA-US 0.87 0.69 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 23 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 3 4264202 194052997 1 27 546 2 10 0 0 15 0 0.27 31 0 0 31 5 7 32 5 5 69.24 88.08 8.77 0 3 4 Whitelist BRCA-US 1_20_8 0.13 0.52 0 0 0.01 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 39 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 4 2826077 167740882 1 13 546 2 4 0 0 7 0.06 0.17 10 0 0 10 4 10 12 5 5 69.24 33.67 63.76 0 2 4 Whitelist BRCA-US 6 0.54 0.38 0 0 0.48 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 5 63910004 127526291 2 8 546 1 0 0 1 6 0.57 0.06 9 0 0 9 4 6 32 5 7 69.24 70.06 27.28 0 4 2 Whitelist BRCA-US 6 0.62 0.19 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 6 72914911 149912519 2 17 546 1 1 0 0 15 0.57 0 35 0 0 35 7 9 55 7 11 69.24 74.25 22.91 0 4 3 Whitelist BRCA-US 2_5 0.87 0 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 7 26783402 109202114 2 8 546 0 1 1 2 4 0.57 0.57 9 0 0 9 5 5 20 7 10 69.24 90.6 9.17 0 4 6 Whitelist BRCA-US 20 0.62 0.79 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 8 6739069 135344822 1 31 546 2 10 0 1 18 0 0.01 38 0 0 38 5 7 39 5 7 69.24 67.21 32.79 0 5 7 Whitelist BRCA-US 3 0.62 0.06 0 0 0.02 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 44 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 9 2831150 134547130 1 25 546 3 8 1 1 12 0.02 0 23 0 0 23 4 12 25 4 4 69.24 92.2 7.1 0 5 4 Whitelist BRCA-US 1_7 0.62 0.02 0 0 0.32 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 38 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 10 12356370 96735367 1 15 546 2 3 0 0 10 0.14 0.76 13 0 0 13 4 6 16 5 6 69.24 76.65 23.17 0 1 2 Whitelist BRCA-US 5_6 0.93 0.92 0 0 0.59 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 11 45898436 116378425 1 11 546 1 5 0 0 5 0.01 0.84 10 0 0 10 3 7 18 4 4 69.24 61.89 34.36 0 4 3 Whitelist BRCA-US 5 0.41 0.98 0 0 0.19 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 12 329064 133417882 1 21 546 1 9 1 0 10 0 0.07 29 0 0 29 10 10 30 10 13 69.24 65.23 34.37 0 4 6 Whitelist BRCA-US 20_8 0.13 0.2 0 0 0.02 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 32 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 13 24769100 32258763 2 4 546 0 0 1 1 2 0.57 0.81 6 0 0 6 3 6 11 4 5 69.24 90.71 9.29 0 4 2 Whitelist BRCA-US 1 0.96 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 14 34699528 79865597 1 10 546 1 3 0 0 6 0.11 1 8 0 0 8 4 5 14 5 5 69.24 77.44 22.14 0 2 3 Whitelist BRCA-US 5 0.96 1 0 0 0.48 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 15 35368036 81048323 3 5 546 2 1 0 0 2 0.3 0.43 6 0 0 6 3 6 10 4 7 69.24 56.01 43.89 0 2 4 Whitelist BRCA-US 0.93 0.68 0 0 0.59 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 16 1406800 85493975 1 14 546 1 2 1 1 9 0.9 0.14 14 0 0 14 4 7 14 4 7 69.24 48.3 47.18 0 3 4 Whitelist BRCA-US 8 0.98 0.34 0 0 0.92 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 17 11802512 67421869 1 8 546 2 4 0 0 2 0.06 0.69 13 0 0 13 3 7 18 5 7 69.24 42.96 57.03 0 2 5 Whitelist BRCA-US 0.54 0.89 0 0 0.48 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 18 42941495 58216137 2 4 546 1 0 1 0 2 0.57 0.35 1 0 0 NA NA NA 6 3 4 69.24 19.7 75.66 0 2 NA Whitelist BRCA-US 0.68 0.61 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 19 14337173 54671968 1 7 546 2 3 0 0 2 0.14 0.64 12 0 0 12 3 7 14 4 7 69.24 56.34 43.49 0 4 2 Whitelist BRCA-US 0.77 0.85 0 0 0.59 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 20 30253204 59314863 1 9 546 1 4 0 0 4 0.04 0.07 12 0 0 12 6 7 19 6 6 69.24 69.7 21.67 0 3 4 Whitelist BRCA-US 3 0.28 0.22 0 0 0.36 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 21 22903252 35868432 1 5 546 0 0 1 1 3 0.57 0.05 9 0 0 9 3 5 17 5 6 69.24 66.02 10.88 0 3 4 Whitelist BRCA-US 1 0.62 0.16 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 22 22086065 22097283 1 1 546 0 1 0 0 0 0.39 0.11 2 0 NA NA NA NA 10 3 6 69.24 62.71 37.29 0 3 6 Whitelist BRCA-US 0.62 0.28 0 NA 0.59 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d2f2560c-ec80-4fea-9474-c47a2e85ea95 X 39859092 42581232 2 2 546 0 0 1 1 0 0.57 0.62 3 0 0 NA NA NA 41 7 16 69.24 59.13 37.33 0 2 3 Whitelist BRCA-US 0.68 0.84 0 0 0.64 0 No BRCA-US d2f2560c-ec80-4fea-9474-c47a2e85ea95 BRCA 0.67 3.45 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BRCA-US DO2252 TCGA-AO-A0J2 d2f2560c-ec80-4fea-9474-c47a2e85ea95 female alive C50.9 41 NA 585 NA Included Breast-AdenoCA BRCA US 0 19.24 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 1 8159480 247557943 1 49 709 16 12 1 2 18 0 0.01 67 0 0 67 5 12 69 5 5 60.78 88.49 8.41 2 3 4 Whitelist BRCA-US 2_6_9 0.15 0.06 0 0 0.01 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 80 0.06 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 2 182905442 238971067 5 8 709 1 2 1 1 3 0.9 0 31 0 0 31 5 5 88 7 10 60.78 90.34 9.58 0 3 4 Whitelist BRCA-US 0.87 0 0 0 0.92 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 13 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 3 39074091 39367902 7 7 709 1 3 2 1 0 0.67 0.83 5 0 0 5 0 5 48 3 6 60.78 64.45 35.52 0 2 4 Whitelist BRCA-US 0.77 0.97 0 0 0.74 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 14 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 4 90878998 135018358 2 8 709 1 1 0 0 6 0.57 0 5 0 0 5 3 5 26 3 6 60.78 46.96 52.82 0 4 2 Whitelist BRCA-US 1 0.62 0.02 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 10 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 5 112191178 115298051 2 2 709 1 1 0 0 0 0.57 0.12 3 0 0 NA NA NA 36 5 6 60.78 69.76 27.16 0 2 3 Whitelist BRCA-US 0.68 0.31 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 4 0 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 6 1587687 158509485 1 28 709 9 7 0 0 12 0 0.43 40 0 0 40 7 10 42 7 10 60.78 44.04 53.02 0 2 3 Whitelist BRCA-US 1 0.16 0.68 0 0 0.05 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 44 0.03 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 7 89983323 158447440 2 13 709 1 0 0 1 11 0.57 0.05 38 0 0 38 6 7 61 7 7 60.78 52.74 44.61 0 5 4 Whitelist BRCA-US 2_9 0.68 0.17 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 15 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 8 67453419 86357134 14 15 709 3 5 3 3 1 0.84 0 20 0 0 20 5 6 94 6 16 60.78 90.63 5.83 1 4 5 Whitelist BRCA-US 0.93 0 0 0 0.88 0 Low confidence BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA With other complex events 29 0.02 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 9 3361891 130382427 1 44 709 7 6 0 1 30 0.01 0 34 0 0 34 5 8 36 5 8 60.78 97.24 0.18 1 4 3 Whitelist BRCA-US 1_2_20_7_8 0.62 0 0 0 0.26 0 Linked to low confidence BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA With other complex events 58 0.04 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 10 822186 132092700 1 25 709 6 7 0 0 12 0 1 23 0 0 23 4 6 23 4 5 60.78 77.36 18.89 0 4 3 Whitelist BRCA-US 0.62 1 0 0 0.14 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 38 0.03 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 11 47447817 102287472 6 15 709 1 1 2 2 9 0.88 0.21 18 0 0 18 4 6 46 4 6 60.78 44.24 51.91 0 3 2 Whitelist BRCA-US 0.99 0.44 0 0 0.91 0 Low confidence BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA With other complex events 21 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 12 68617988 130546256 5 6 709 0 2 1 2 1 0.53 0.86 24 0 0 24 5 6 38 5 6 60.78 58.48 37.15 0 3 2 Whitelist BRCA-US 0.93 0.99 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 11 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 13 67806006 114859073 1 12 709 4 4 1 1 2 0.31 1 22 0 0 22 5 6 27 5 6 60.78 59.87 37.08 0 3 1 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 22 0.02 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 14 42230205 57661101 1 3 709 2 1 0 0 0 0.3 0.05 6 0 0 6 3 4 11 3 7 60.78 0.78 99.22 0 2 0 Whitelist BRCA-US 0.62 0.17 0 0 0.59 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 6 0 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 15 20268724 90330216 1 15 709 0 5 1 0 9 0.01 0.82 11 0 0 11 3 4 11 3 4 60.78 3.54 96.37 0 2 3 Whitelist BRCA-US 6_8 0.54 0.96 0 0 0.19 0 Linked to low confidence BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA With other complex events 21 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 16 78489529 79222223 2 2 709 2 0 0 0 0 0.11 0 6 0 0 6 4 6 46 11 11 60.78 77.67 17.8 0 1 2 Whitelist BRCA-US 0.54 0.01 0 0 0.48 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 4 0 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 17 6124848 80125721 1 26 709 3 4 0 1 18 0.17 0.01 19 0 0 19 4 9 19 4 7 60.78 43.42 55.77 1 3 2 Whitelist BRCA-US 1_2 0.45 0.05 0 0 0.59 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 34 0.02 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 18 55533358 55545392 2 2 709 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 9 5 7 60.78 75.68 19.39 0 3 NA Whitelist BRCA-US 0.68 0.19 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 4 0 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 19 56897639 59057670 4 4 709 0 1 1 2 0 0.57 0 4 0 0 4 3 4 37 5 14 60.78 81 11.51 0 1 2 Whitelist BRCA-US 0.68 0 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 8 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 20 14792624 55573864 2 11 709 2 1 0 1 7 0.57 0 27 0 0 27 5 8 42 7 8 60.78 99.31 0 0 4 5 Whitelist BRCA-US 0.74 0 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 15 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 21 16706105 40939605 1 16 709 0 3 0 1 12 0.11 0 11 0 0 11 4 6 15 4 6 60.78 55.85 21.5 0 3 2 Whitelist BRCA-US 20 0.68 0 0 0 0.48 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 20 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f 22 29862575 30826191 2 3 709 0 1 0 1 1 0.57 0.86 5 0 0 5 0 3 10 4 4 60.78 26.14 62.75 0 4 8 Whitelist BRCA-US 0.87 0.99 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 5 0 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d3d545b3-457f-4389-821f-704cb24aff7f X 30768634 150086913 6 8 709 2 2 2 0 2 0.57 0 11 0 0 11 5 6 15 5 5 60.78 40 56.84 0 2 0 Whitelist BRCA-US 0.87 0 0 0 0.64 0 No BRCA-US d3d545b3-457f-4389-821f-704cb24aff7f BRCA 0.76 3.03 Breast-AdenoCA NA 14 0.01 frameshift_insertion,17_7579359_GA_-,CN:3 3 BRCA-US DO4155 TCGA-AR-A256 d3d545b3-457f-4389-821f-704cb24aff7f female deceased C50.9 45 2854 NA NA Included Breast-AdenoCA BRCA US 1 93.88 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 1 159130013 239596100 1 2 427 0 2 0 0 0 0.11 0 7 0 0 7 4 7 13 6 7 67.43 48.69 48.29 11 4 5 Whitelist BRCA-US 0.54 0 0 0 0.48 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 2 49102608 217896712 1 11 427 3 0 0 3 5 0.11 0 21 0 0 21 4 6 26 4 6 67.43 89.94 7.12 11 3 2 Whitelist BRCA-US 0.62 0.02 0 0 0.48 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 3 103209844 192171404 4 6 427 1 0 2 1 2 0.57 0.64 19 0 0 19 7 14 34 7 7 67.43 95.13 1.72 17 4 5 Whitelist BRCA-US 0.62 0.85 0 0 0.64 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 4 40293818 190601153 1 6 427 3 2 0 0 1 0.14 0.01 7 0 0 7 6 7 7 6 6 67.43 29.81 67.51 11 2 3 Whitelist BRCA-US 0.62 0.03 0 0 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 5 169464130 169577107 1 1 427 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 5 3 3 67.43 11.79 88.08 0 2 NA Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 6 57423175 76896760 13 35 427 2 4 3 4 22 0.84 0 21 0 0 21 6 12 41 7 9 67.43 97.44 2.42 72 4 5 Whitelist BRCA-US 14 0.62 0 0 0 0.88 1 Low confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA With other complex events 48 0.06 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 7 NA NA 0 0 427 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 20 6 7 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 0 NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 8 NA NA 0 0 427 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 11 7 10 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 0 NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 9 17497087 129076121 10 12 427 2 2 2 4 2 0.75 0.53 32 0 0 32 4 5 32 4 5 67.43 44.03 55.82 3 4 2 Whitelist BRCA-US 12 0.68 0.76 0 0 0.83 1 Low confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA With other complex events 22 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 10 NA NA 0 0 427 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 11 1800449 37610887 7 14 427 3 2 1 1 7 0.67 0.57 13 0 0 13 5 5 25 6 8 67.43 74.36 21.95 2 2 3 Whitelist BRCA-US 0.98 0.79 0 0 0.74 1 Low confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA With other complex events 21 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 12 33908610 132258021 10 13 427 2 1 4 3 3 0.57 0.11 14 0 0 14 8 14 14 8 8 67.43 85.53 10.66 20 3 4 Whitelist BRCA-US 0.68 0.28 0 0 0.64 1 High confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA With other complex events 23 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 13 NA NA 0 0 427 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 13 13 13 0 0 0 0 0 0 Whitelist BRCA-US NA 0.53 0 NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 14 20136324 55556440 34 55 427 9 7 9 9 21 0.95 0 76 0 0 76 6 8 82 6 6 67.43 36.24 47.85 16 3 2 Whitelist BRCA-US 6 0.93 0 0 0 0.97 1 Low confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA With other complex events 89 0.1 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 15 77791835 81104881 2 4 427 0 0 2 2 0 0.26 0.18 1 0 0 NA NA NA 7 4 5 67.43 28.66 66.39 0 2 NA Whitelist BRCA-US 0.62 0.4 0 0 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 16 8934445 23614254 3 10 427 1 0 2 0 7 0.3 0 5 0 0 5 3 5 23 3 9 67.43 41.52 53.96 1 4 5 Whitelist BRCA-US 11 0.96 0.01 0 0 0.59 1 Linked to low confidence BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA After polyploidization 13 0.02 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 17 19599977 80954190 55 69 427 17 13 12 13 14 0.78 0 50 0 0 50 3 4 51 3 4 67.43 56.42 38.23 6 3 6 Whitelist BRCA-US 0.73 0 0 0 0.84 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 124 0.15 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 18 NA NA 0 0 427 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 19 4292530 58893626 1 6 427 2 3 0 1 0 0.34 0 14 0 0 14 4 6 22 5 10 67.43 92.22 0.04 17 4 5 Whitelist BRCA-US 0.62 0 0 0 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 20 NA NA 0 0 427 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 21 30687438 30846897 1 1 427 1 0 0 0 0 0.39 0.82 2 NA NA NA NA NA 6 3 5 67.43 68.03 0.53 1 3 4 Whitelist BRCA-US 0.62 0.96 NA NA 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad 22 18605676 18616784 1 1 427 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 67.43 88.89 0 0 3 NA Whitelist BRCA-US 0.62 0.5 NA NA 0.59 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d67cd793-2931-429a-9084-2f3c4c8be7ad X 62042944 68767168 22 26 427 7 5 5 5 4 0.91 0 25 0 0 25 3 4 52 7 7 67.43 95.36 1.23 7 2 7 Whitelist BRCA-US 0.92 0 0 0 0.93 1 No BRCA-US d67cd793-2931-429a-9084-2f3c4c8be7ad BRCA 0.54 3.31 Breast-AdenoCA NA 48 0.06 nonsynonymous_SNV,17_7577580_C_T,CN:2 3 BRCA-US DO3614 TCGA-A2-A0EY d67cd793-2931-429a-9084-2f3c4c8be7ad female alive C50.9 62 NA 485 NA Included Breast-AdenoCA BRCA US 0 15.95 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 1 11893339 216979169 1 6 304 2 2 1 1 0 0.88 0 10 0 0 10 3 9 11 3 5 72.7 89.17 10.83 0 3 2 Whitelist BRCA-US 0.93 0.02 0 0 0.91 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 2 74451168 74466825 1 1 304 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 8 3 3 72.7 96.72 0.58 0 3 NA Whitelist BRCA-US 0.62 0 0 NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 3 19550742 194743878 1 12 304 3 4 1 1 3 0.39 0.11 18 0 0 18 10 11 20 12 12 72.7 68.62 28.25 0 2 3 Whitelist BRCA-US 0.68 0.29 0 0 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 21 0.03 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 4 37039296 186937167 1 7 304 3 1 1 0 2 0.28 0.01 6 0 0 6 3 3 6 3 3 72.7 97.63 0 0 1 0 Whitelist BRCA-US 0.62 0.03 0 0 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 12 0.02 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 5 59695906 176994229 1 5 304 1 3 0 1 0 0.28 0.01 9 0 0 9 3 7 10 3 5 72.7 87.81 12.07 0 2 1 Whitelist BRCA-US 0.62 0.06 0 0 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 10 0.02 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 6 105302877 111874190 27 29 304 9 8 6 4 2 0.53 0 35 0 0 35 4 9 54 7 16 72.7 78.75 21.1 0 4 5 Whitelist BRCA-US 0.68 0 0 0 0.64 1 Low confidence BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA With other complex events 56 0.09 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 7 12120131 113788176 1 7 304 2 4 0 0 1 0.06 0.52 5 0 0 5 3 5 8 4 4 72.7 99.76 0 0 3 4 Whitelist BRCA-US 0.54 0.76 0 0 0.48 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 13 0.02 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 8 37191389 43639589 11 14 304 4 2 2 3 3 0.8 0 17 0 0 17 4 6 36 4 5 72.7 96.53 0.05 0 4 5 Whitelist BRCA-US 12 0.81 0 0 0 0.84 1 Linked to high confidence BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA With other complex events 25 0.04 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 9 112217922 113123826 1 1 304 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 72.7 99.3 0 0 0 1 Whitelist BRCA-US 0.62 0.02 NA NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 10 69510048 69534879 1 1 304 1 0 0 0 0 0.39 0.01 1 0.11 NA NA NA NA 5 3 3 72.7 35.56 61.01 0 2 NA Whitelist BRCA-US 0.62 0.04 0.11 NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 11 62436024 73053815 2 3 304 0 0 1 1 1 0.57 0.68 4 0 0 4 3 4 17 3 5 72.7 73.62 22.91 0 3 4 Whitelist BRCA-US 0.87 0.88 0 0 0.64 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 12 66502753 130003739 11 32 304 1 5 3 2 21 0.36 0 39 0 0 39 7 7 50 7 7 72.7 35.61 60.65 2 3 2 Whitelist BRCA-US 6 0.92 0 0 0 0.59 1 High confidence BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA With other complex events 43 0.07 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 13 65488647 114881095 52 71 304 13 9 17 13 19 0.48 0 93 0 0 93 5 8 93 5 7 72.7 99.19 0.56 24 3 0 Whitelist BRCA-US 12 0.62 0 0 0 0.64 1 Low confidence BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA With other complex events 123 0.2 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 14 44027223 44082826 1 1 304 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 7 3 4 72.7 0.71 95.58 0 1 2 Whitelist BRCA-US 0.62 0.11 NA NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 15 78925524 79629516 1 1 304 0 1 0 0 0 0.39 0.16 2 0 NA NA NA NA 5 4 4 72.7 99.9 0 0 3 4 Whitelist BRCA-US 0.62 0.36 0 NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 16 187603 84630039 1 5 304 1 2 1 0 1 0.57 0.86 14 0 0 14 4 8 15 4 6 72.7 66.92 27.91 0 3 2 Whitelist BRCA-US 0.68 0.99 0 0 0.64 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 9 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 17 33982780 58666276 1 3 304 0 0 0 2 1 0.11 0.16 3 0 0 NA NA NA 5 3 3 72.7 71.49 28.51 0 1 2 Whitelist BRCA-US 0.62 0.36 0 0 0.48 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 5 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 18 NA NA 0 0 304 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.62 0 NA NA 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 19 3984595 4121315 2 2 304 2 0 0 0 0 0.11 0.1 3 0 0 NA NA NA 15 3 5 72.7 53.71 39.01 0 0 1 Whitelist BRCA-US 0.54 0.26 0 0 0.48 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 4 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 20 8696210 50462787 1 5 304 0 2 0 0 3 0.11 1 5 0 0 5 3 3 6 3 4 72.7 98.63 0.38 0 3 1 Whitelist BRCA-US 0.68 1 0 0 0.48 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 7 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 21 27524357 27545539 1 1 304 1 0 0 0 0 0.39 0.28 2 0 NA NA NA NA 4 3 4 72.7 70.29 7.06 0 3 4 Whitelist BRCA-US 0.62 0.53 0 NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 22 30744866 36135037 1 1 304 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 72.7 100 0 0 3 4 Whitelist BRCA-US 0.62 0.81 NA NA 0.59 1 No BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA NA 2 0 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d6f7afc0-1558-43ad-acb1-2b5311ed2264 X 14585295 107478272 1 4 304 1 1 0 0 2 0.57 0.3 7 0 0 7 5 7 18 6 6 72.7 11.55 88.22 0 2 3 Whitelist BRCA-US 12 0.62 0.54 0 0 0.64 1 Linked to high confidence BRCA-US d6f7afc0-1558-43ad-acb1-2b5311ed2264 BRCA 0.27 2.34 Breast-AdenoCA Canonical without polyploidization 6 0.01 NA 2 BRCA-US DO3840 TCGA-GM-A2DF d6f7afc0-1558-43ad-acb1-2b5311ed2264 female alive C50.9 53 NA 1299 NA Included Breast-AdenoCA BRCA US 0 42.73 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 1 205752472 215774932 2 22 453 0 1 0 1 20 0.57 0.01 28 0 0 28 4 6 48 4 5 73.83 96.95 0 1 10 6 Whitelist BRCA-US 0.68 0.05 0 0 0.64 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 24 0.03 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 2 NA NA 0 0 453 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 3 84192337 188616555 1 8 453 1 0 1 2 4 0.57 0.08 10 0 0 10 4 7 13 4 5 73.83 69.58 27.11 1 5 4 Whitelist BRCA-US 0.62 0.23 0 0 0.64 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 12 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 4 NA NA 0 0 453 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 13 5 6 0 0 0 0 0 0 Whitelist BRCA-US NA 0.25 0 NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 5 137988194 138617020 1 1 453 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 7 3 3 73.83 96.59 0.73 0 4 6 Whitelist BRCA-US 0.62 0 0 NA 0.59 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 6 NA NA 0 0 453 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 7 24242187 45612729 1 3 453 0 1 0 1 1 0.57 0 3 0 0 NA NA NA 5 5 5 73.83 97.33 0 0 3 4 Whitelist BRCA-US 0.62 0 0 0 0.64 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 8 78814327 143134735 116 220 453 30 32 29 25 104 0.83 0 214 0 0 214 4 7 216 4 5 73.83 64.54 31.93 59 9 19 Whitelist BRCA-US 12 0.83 0 0 0 0.87 0 Low confidence BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA With other complex events 336 0.37 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 9 3854749 5411305 3 5 453 0 0 2 1 2 0.3 0.33 1 0 0 NA NA NA 8 4 8 73.83 99.99 0 0 4 NA Whitelist BRCA-US 0.62 0.58 0 0 0.59 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 8 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 10 69941743 82591016 3 3 453 2 0 1 0 0 0.3 0 4 0 0 4 3 4 8 3 3 73.83 88.79 7.86 0 4 3 Whitelist BRCA-US 0.62 0.03 0 0 0.59 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 11 NA NA 0 0 453 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 12 61134794 98290462 8 48 453 2 2 2 2 40 1 0 48 0 0 48 5 6 55 5 6 73.83 59.09 37.11 15 6 3 Whitelist BRCA-US 0.95 0 0 0 1 0 Low confidence BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA With other complex events 56 0.06 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 13 NA NA 0 0 453 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 14 NA NA 0 0 453 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 15 NA NA 0 0 453 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 16 788006 2207147 1 3 453 2 0 0 0 1 0.11 0 4 NA 0 4 3 4 6 4 4 73.83 37.52 57.28 0 6 5 Whitelist BRCA-US 0.62 0.02 NA 0 0.48 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 5 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 17 25309656 40138460 78 108 453 25 16 19 18 30 0.51 0 54 0 0 54 3 4 54 3 3 73.83 9.99 85.56 10 2 3 Whitelist BRCA-US 12 0.54 0 0 0 0.64 0 Linked to low confidence BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA With other complex events 186 0.21 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 18 NA NA 0 0 453 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 19 10514524 10793800 1 1 453 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 8 4 5 73.83 91.77 0 0 4 6 Whitelist BRCA-US 0.62 0.14 NA NA 0.59 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 20 NA NA 0 0 453 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.34 0 NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 21 33623864 34055639 1 1 453 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 73.83 77.35 0 0 4 5 Whitelist BRCA-US 0.62 0.17 NA NA 0.59 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 2 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 22 NA NA 0 0 453 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.41 NA NA NA 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 0 0 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d8d7a6c2-6427-4f47-968c-6c3affba4617 X 31649656 51227795 2 4 453 1 1 0 0 2 0.57 0.03 4 0 0 4 4 4 8 6 7 73.83 54.62 41.65 0 2 3 Whitelist BRCA-US 0.68 0.12 0 0 0.64 0 No BRCA-US d8d7a6c2-6427-4f47-968c-6c3affba4617 BRCA 0.62 3.59 Breast-AdenoCA NA 6 0.01 NA 4 BRCA-US DO5012 TCGA-A8-A08B d8d7a6c2-6427-4f47-968c-6c3affba4617 female alive C50.9 52 NA 702 NA Included Breast-AdenoCA BRCA US 0 23.09 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 1 1898876 77522550 10 13 1222 3 3 1 3 3 0.75 0.92 28 0 0 28 5 12 80 10 15 50.01 67.02 29.83 0 2 3 Whitelist BRCA-US 0.9 1 0 0 0.83 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 23 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 2 133905726 139720354 7 11 1222 1 3 1 2 4 0.67 0.41 10 0 0 10 3 6 67 8 10 50.01 56.21 43.64 15 2 4 Whitelist BRCA-US 1 0.62 0.66 0 0 0.74 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 18 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 3 83571470 194744514 11 19 1222 1 1 4 5 8 0.2 0.61 34 0 0 34 7 11 49 7 9 50.01 68.03 31.82 0 4 3 Whitelist BRCA-US 11_9 0.68 0.83 0 0 0.59 0 Linked to high confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA With other complex events 30 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 False positive; manually removed BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 4 44005766 48986870 5 14 1222 1 2 1 1 9 0.9 0.03 4 0 0 4 0 3 16 6 6 50.01 88.57 9.06 0 2 3 Whitelist BRCA-US 11 0.81 0.11 0 0 0.92 0 Linked to high confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA With other complex events 19 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 5 53819527 59730141 2 4 1222 1 3 0 0 0 0.11 0.14 12 0 0 12 5 12 57 9 9 50.01 30.44 69.43 0 2 3 Whitelist BRCA-US 0.54 0.34 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 8 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 6 15838701 146459167 8 28 1222 2 0 4 2 20 0.26 0 70 0 0 70 4 9 83 4 9 50.01 75.29 24.56 4 3 4 Whitelist BRCA-US 17 0.87 0.01 0 0 0.59 0 Low confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA With other complex events 36 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 7 21631744 43351863 2 8 1222 0 0 1 1 6 0.57 0.41 7 0 0 7 3 5 26 6 18 50.01 12.17 87.6 0 2 1 Whitelist BRCA-US 5 0.87 0.66 0 0 0.64 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 10 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 8 6538486 141884919 1 24 1222 1 13 0 1 9 0 0.05 26 0 0 26 6 9 29 6 9 50.01 86.22 13.26 0 2 1 Whitelist BRCA-US 0.04 0.16 0 0 0 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 39 0.02 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 9 100142774 123611055 7 10 1222 3 3 1 0 3 0.28 0.03 12 0 0 12 12 12 41 13 19 50.01 33.82 65.48 0 1 2 Whitelist BRCA-US 0.62 0.12 0 0 0.59 0 Linked to high confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA Canonical without polyploidization 17 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 False positive; manually removed BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 10 1642894 126723909 1 36 1222 4 17 0 2 13 0 0.41 22 0 0 22 5 11 22 5 11 50.01 25.77 74.05 0 2 3 Whitelist BRCA-US 1 0.1 0.66 0 0 0 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 59 0.02 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 11 1073009 116625595 159 176 1222 38 51 33 37 17 0.2 0 139 0 0 139 10 15 142 10 15 50.01 42.9 56.67 5 4 2 Whitelist BRCA-US 3_9 0.62 0 0 0 0.59 0 High confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA With other complex events 335 0.14 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 12 130694228 130764717 2 2 1222 0 0 1 1 0 0.57 0.18 2 0 0 NA NA NA 27 9 9 50.01 82.97 12.94 0 3 4 Whitelist BRCA-US 0.68 0.39 0 0 0.64 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 4 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 13 113613553 114996473 2 2 1222 0 2 0 0 0 0.11 0.01 1 0 0 NA NA NA 15 5 8 50.01 70.89 14.81 0 3 NA Whitelist BRCA-US 0.54 0.03 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 4 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 14 25445910 99447397 9 14 1222 2 4 1 2 5 0.55 0.37 36 0 0 36 9 15 44 9 17 50.01 47.19 36.9 2 2 1 Whitelist BRCA-US 0.68 0.62 0 0 0.64 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 23 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 False positive; manually removed BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 15 64693559 65841361 2 2 1222 0 2 0 0 0 0.11 0.38 3 0 0 NA NA NA 32 5 6 50.01 57.98 26.53 0 2 3 Whitelist BRCA-US 0.54 0.63 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 4 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 16 10160274 11081671 2 2 1222 0 2 0 0 0 0.11 0.42 2 0 0 NA NA NA 24 9 11 50.01 48.55 51.36 0 2 3 Whitelist BRCA-US 0.54 0.67 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 4 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 17 2481365 78698346 1 20 1222 0 16 0 0 4 0 0.18 20 0 0 20 7 16 20 7 16 50.01 27.41 72.58 0 2 3 Whitelist BRCA-US 0 0.4 0 0 0 0 Linked to low confidence BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA With other complex events 36 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 18 22279922 49821731 2 6 1222 0 0 1 1 4 0.57 0.86 6 0 0 6 4 6 15 5 5 50.01 53.04 41.74 0 3 2 Whitelist BRCA-US 0.93 0.99 0 0 0.64 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 8 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 19 3416111 50323883 1 8 1222 1 5 0 1 1 0.04 0.47 2 0 0 NA NA NA NA NA NA 50.01 32.6 67.23 0 1 2 Whitelist BRCA-US 0.54 0.71 0 0 0.38 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 15 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 20 3153659 59059580 1 18 1222 0 3 0 1 14 0.11 0.55 8 0 0 8 4 8 9 4 4 50.01 40.44 58.74 7 2 3 Whitelist BRCA-US 0.99 0.78 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 22 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 21 18600060 27646650 2 3 1222 0 2 0 0 1 0.11 0 10 0 0 10 3 4 15 6 6 50.01 20.84 49.18 0 3 4 Whitelist BRCA-US 0.62 0.01 0 0 0.48 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 5 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a 22 18435856 41662566 1 7 1222 0 4 0 0 3 0.01 0.79 2 0 0 NA NA NA 5 4 5 50.01 21.46 54.76 0 2 3 Whitelist BRCA-US 10 0.62 0.94 0 0 0.16 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 11 0 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::d9dc3b59-613d-469e-8b4f-6c5a557eb26a X 7323507 150791833 1 16 1222 2 9 0 0 5 0 0.01 14 0 0 14 8 14 14 8 8 50.01 9.68 90.09 0 2 1 Whitelist BRCA-US 0.01 0.06 0 0 0.02 0 No BRCA-US d9dc3b59-613d-469e-8b4f-6c5a557eb26a BRCA 0.41 2.07 Breast-AdenoCA NA 27 0.01 stopgain,17_7578239_A_C,CN:3 1 BRCA-US DO2341 TCGA-EW-A3U0 d9dc3b59-613d-469e-8b4f-6c5a557eb26a female alive C50.9 61 NA 229 NA Included Breast-AdenoCA BRCA US 0 7.53 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 1 58265896 204819002 2 25 630 1 8 1 0 15 0 0 48 0 0 48 5 18 104 12 14 47.59 49.22 50.78 0 2 3 Whitelist BRCA-US 15_7_8 0.32 0 0 0 0.05 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 35 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 2 120471988 123616237 2 2 630 0 1 0 1 0 0.57 0.01 2 0 0 NA NA NA 60 15 28 47.59 85.51 14.39 5 3 5 Whitelist BRCA-US 0.68 0.03 0 0 0.64 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 3 82246196 189354805 2 17 630 2 6 0 0 9 0.01 0.35 46 0 0 46 9 11 61 9 11 47.59 52.23 44.71 2 3 4 Whitelist BRCA-US 6_8 0.41 0.6 0 0 0.16 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 4 65776132 131020717 3 6 630 1 0 1 1 3 0.8 0.47 21 0 0 21 4 7 49 13 16 47.59 60.31 37.32 1 4 5 Whitelist BRCA-US 20 0.68 0.72 0 0 0.84 0 Linked to low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 9 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 5 3262330 164768438 1 12 630 0 9 0 0 3 0 0 26 0 0 26 9 11 27 9 11 47.59 26.91 70.41 5 5 2 Whitelist BRCA-US 7 0.01 0 0 0 0 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 6 93474674 108070113 6 23 630 2 2 2 0 17 0.57 0 27 0 0 27 7 14 71 15 24 47.59 40.13 59.74 9 4 3 Whitelist BRCA-US 13_7 0.79 0 0 0 0.64 0 Linked to low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 29 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 False positive; manually removed BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 7 10063721 147714911 1 30 630 2 7 0 1 20 0.01 1 36 0 0 36 7 15 37 7 7 47.59 77.6 19.68 0 3 4 Whitelist BRCA-US 1_19_5_6 0.62 1 0 0 0.19 0 Linked to low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 40 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 8 138302264 144043894 6 8 630 1 2 1 2 2 0.88 0.72 10 0 0 10 4 10 51 14 22 47.59 62.02 34.56 4 2 3 Whitelist BRCA-US 0.62 0.9 0 0 0.91 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 9 9282892 10182081 2 2 630 0 2 0 0 0 0.11 0.05 3 0 0 NA NA NA 25 5 8 47.59 42.77 56.53 0 2 4 Whitelist BRCA-US 0.54 0.16 0 0 0.48 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 10 8113663 12635794 7 8 630 2 2 2 1 1 0.93 0.51 12 0 0 12 4 6 30 5 7 47.59 8.03 88.56 0 4 5 Whitelist BRCA-US 0.87 0.75 0 0 0.95 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 11 69395485 69923067 3 3 630 0 3 0 0 0 0.03 0.03 3 0 0 NA NA NA 26 5 8 47.59 15.82 83.76 0 4 5 Whitelist BRCA-US 0.41 0.11 0 0 0.33 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 12 6511073 132672448 1 15 630 1 10 0 0 4 0 0.02 27 0 0 27 15 19 30 15 19 47.59 20.75 75.51 3 2 3 Whitelist BRCA-US 0.04 0.07 0 0 0 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 13 35528163 62533552 9 27 630 1 4 2 2 18 0.55 0 48 0 0 48 6 10 70 7 7 47.59 86.47 13.53 0 2 1 Whitelist BRCA-US 6 0.68 0 0 0 0.64 0 Low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 36 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 14 37962379 45612754 2 4 630 0 3 0 1 0 0.11 0.73 5 0 0 5 3 4 34 16 17 47.59 96.35 0 1 3 4 Whitelist BRCA-US 0.54 0.91 0 0 0.48 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 15 22324442 89201249 1 7 630 0 5 0 0 2 0 0.22 12 0 0 12 9 12 18 9 9 47.59 25.04 74.8 0 3 2 Whitelist BRCA-US 0.47 0.46 0 0 0.07 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 16 56731428 71830207 2 9 630 0 2 1 1 5 0.57 0.08 17 0 0 17 3 4 38 6 6 47.59 58.33 36.76 0 6 8 Whitelist BRCA-US 7 0.97 0.23 0 0 0.64 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 17 14753198 76302171 44 54 630 11 17 9 7 10 0.17 0 91 0 0 91 6 7 94 6 6 47.59 67.54 27.98 1 4 5 Whitelist BRCA-US 20_7 0.62 0 0 0 0.59 0 Low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 98 0.08 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 18 NA NA 0 0 630 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.28 0 NA NA 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 19 14536061 45590817 1 6 630 0 6 0 0 0 0 0.67 11 0 0 11 6 7 13 7 8 47.59 6.25 85.59 0 2 3 Whitelist BRCA-US 0.04 0.87 0 0 0.03 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 20 34495099 60210989 39 49 630 10 12 9 8 10 0.83 0 75 0 0 75 5 10 93 7 10 47.59 51.47 41.79 6 8 5 Whitelist BRCA-US 17 0.94 0 0 0 0.87 0 Low confidence BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA With other complex events 88 0.07 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 21 24721065 36672706 1 4 630 0 4 0 0 0 0.01 0.72 10 0 0 10 5 5 15 5 8 47.59 53.68 23.67 0 3 4 Whitelist BRCA-US 0.21 0.9 0 0 0.16 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc 22 31922551 47086151 1 4 630 0 4 0 0 0 0.01 1 10 0 0 10 8 10 13 11 13 47.59 2.61 97.39 0 2 3 Whitelist BRCA-US 0.21 1 0 0 0.16 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e4fc0909-f284-4471-866d-d8967b6adcbc X 4881574 145429683 1 25 630 0 13 0 0 12 0 0.47 38 0 0 38 8 14 39 8 14 47.59 47.48 49.14 4 3 2 Whitelist BRCA-US 0 0.71 0 0 0 0 No BRCA-US e4fc0909-f284-4471-866d-d8967b6adcbc BRCA 0.49 2.63 Breast-AdenoCA NA 38 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 BRCA-US DO2455 TCGA-E2-A14P e4fc0909-f284-4471-866d-d8967b6adcbc female alive C50.9 79 NA 487 NA Included Breast-AdenoCA BRCA US 0 16.02 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 1 6989822 186319751 1 10 246 3 0 0 0 7 0.03 0.04 17 0 0 17 4 7 20 5 5 43.13 38.28 61.4 0 2 1 Whitelist BRCA-US 4 0.62 0.15 0 0 0.33 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 2 4640121 176345297 1 8 246 4 0 1 2 1 0.17 0.65 14 0 0 14 5 9 20 8 8 43.13 54.15 45.74 0 1 2 Whitelist BRCA-US 0.62 0.86 0 0 0.59 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 15 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 3 12134683 173310299 1 10 246 5 1 0 0 4 0.01 0.06 19 0 0 19 5 14 29 9 9 43.13 46.35 53.5 0 2 1 Whitelist BRCA-US 0.54 0.19 0 0 0.19 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 16 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 4 24550144 168534679 5 11 246 2 0 1 2 6 0.53 0 42 0 0 42 6 8 45 6 8 43.13 71.43 28.33 4 4 3 Whitelist BRCA-US 6 0.68 0 0 0 0.64 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 16 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 5 22534358 38582448 2 2 246 0 0 1 1 0 0.57 0.6 4 0 0 4 4 4 14 5 6 43.13 58.42 41.45 1 1 2 Whitelist BRCA-US 0.68 0.82 0 0 0.64 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 6 92002216 168390673 1 7 246 2 2 0 0 3 0.26 1 13 0 0 13 5 8 21 5 8 43.13 53.93 43.1 0 1 2 Whitelist BRCA-US 4 0.96 1 0 0 0.59 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 11 0.02 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 7 19309161 99653518 1 6 246 3 0 0 0 3 0.03 0.26 8 0 0 8 5 6 19 6 7 43.13 15.75 84.2 0 4 2 Whitelist BRCA-US 4 0.54 0.5 0 0 0.33 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 9 0.02 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 8 3732503 4826886 1 2 246 2 0 0 0 0 0.11 1 4 0 0 4 4 4 19 5 7 43.13 48.7 47.78 0 0 1 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 9 31630576 33583969 1 2 246 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 8 3 4 43.13 18.2 81.76 0 1 3 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 10 4045551 123155743 1 9 246 6 0 0 1 2 0 0.28 11 0 0 11 4 5 11 4 5 43.13 23.75 75.75 1 1 2 Whitelist BRCA-US 3 0.15 0.53 0 0 0.09 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 16 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 11 73542218 129701752 1 8 246 5 0 0 0 3 0 0.01 23 0 0 23 6 6 35 7 10 43.13 40.45 59.4 0 3 2 Whitelist BRCA-US 0.28 0.04 0 0 0.07 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 13 0.03 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 12 8880746 54954634 1 5 246 3 0 0 0 2 0.03 0.03 9 0 0 9 4 9 17 6 6 43.13 28.75 71.17 0 1 2 Whitelist BRCA-US 6 0.45 0.12 0 0 0.33 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 8 0.02 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 13 NA NA 0 0 246 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.02 NA NA NA 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 14 NA NA 0 0 246 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.1 NA NA NA 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 15 38806819 42433308 1 2 246 2 0 0 0 0 0.11 0.17 2 0 0 NA NA NA NA NA NA 43.13 99.91 0 0 0 1 Whitelist BRCA-US 0.54 0.39 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 16 12086247 12610550 1 2 246 2 0 0 0 0 0.11 0.23 4 0 0 4 3 4 7 4 4 43.13 0.92 98.99 0 1 0 Whitelist BRCA-US 0.54 0.46 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 17 NA NA 0 0 246 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 0 0 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 18 62045102 62689212 5 6 246 0 0 3 2 1 0.14 0.32 4 0 0 4 3 4 4 3 3 43.13 20.1 79.89 0 2 1 Whitelist BRCA-US 0.54 0.57 0 0 0.59 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 11 0.02 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 19 12473978 53466864 1 2 246 2 0 0 0 0 0.11 1 4 0 0 4 4 4 6 5 5 43.13 0.55 99.28 0 1 2 Whitelist BRCA-US 0.54 1 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 20 749085 15097262 1 2 246 2 0 0 0 0 0.11 0.5 2 0.3 0.04 NA NA NA NA NA NA 43.13 0.63 99.26 0 1 2 Whitelist BRCA-US 0.54 0.75 0.3 0.04 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 21 40996376 41065592 1 1 246 1 0 0 0 0 0.39 0.23 2 0 NA NA NA NA 4 3 3 43.13 42.48 34.87 0 1 2 Whitelist BRCA-US 0.62 0.47 0 NA 0.59 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 2 0 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a 22 48583986 48617929 2 5 246 1 1 0 0 3 0.57 0 5 0 0 5 3 4 11 4 9 43.13 33.73 55.16 0 3 1 Whitelist BRCA-US 0.93 0.01 0 0 0.64 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 7 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::e9f4f373-37a5-48ad-a1a0-b0d47820111a X 38591591 48219242 1 2 246 2 0 0 0 0 0.11 0.77 1 0 0 NA NA NA 6 5 5 43.13 51.04 45.81 0 2 NA Whitelist BRCA-US 0.54 0.93 0 0 0.48 0 No BRCA-US e9f4f373-37a5-48ad-a1a0-b0d47820111a BRCA 0.66 1.92 Breast-AdenoCA NA 4 0.01 frameshift_deletion,17_7578218_-_T,CN:2 2 BRCA-US DO4233 TCGA-AO-A0J6 e9f4f373-37a5-48ad-a1a0-b0d47820111a female alive C50.9 61 NA 775 NA Included Breast-AdenoCA BRCA US 0 25.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 1 173240895 180661396 4 7 662 1 1 1 1 3 1 0 9 0 0 9 4 5 74 5 7 77.33 100 0 0 6 4 Whitelist BRCA-US 17 0.77 0 0 0 1 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 11 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 2 8912100 170495188 9 33 662 2 2 2 3 24 0.95 0.53 46 0 0 46 11 21 55 11 11 77.33 97.32 0 2 4 3 Whitelist BRCA-US 1 0.76 0 0 0.97 0 High confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 42 0.03 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 3 143115106 168498933 17 27 662 5 3 6 3 10 0.66 0 43 0 0 43 8 19 87 8 10 77.33 96.86 0 0 5 6 Whitelist BRCA-US 11 0.84 0 0 0 0.74 0 High confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 44 0.03 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 4 17120583 152005197 1 6 662 2 2 0 0 2 0.26 0 8 0 0 8 3 6 9 3 7 77.33 55.18 44.78 0 2 4 Whitelist BRCA-US 0.68 0 0 0 0.59 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 10 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 5 50309848 62318656 7 12 662 1 5 1 0 5 0.04 0.63 20 0 0 20 9 10 42 9 12 77.33 84.11 13.21 7 3 4 Whitelist BRCA-US 0.45 0.84 0 0 0.38 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 19 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 False positive; manually removed BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 6 6754753 166144215 1 25 662 3 9 1 1 11 0.01 0.16 31 0 0 31 8 12 33 8 12 77.33 47.33 52.54 4 3 4 Whitelist BRCA-US 12_17 0.32 0.37 0 0 0.16 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 39 0.03 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 7 49989231 144882103 3 14 662 1 1 2 2 8 0.88 0.73 36 0 0 36 7 18 49 9 9 77.33 97.28 0 5 4 5 Whitelist BRCA-US 15_9 0.81 0.91 0 0 0.91 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 20 0.02 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 False positive; manually removed BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 8 17365292 141599133 1 14 662 1 8 0 0 5 0 0.02 22 0 0 22 4 8 22 4 8 77.33 82.53 14.05 0 5 6 Whitelist BRCA-US 10 0.49 0.08 0 0 0.02 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 23 0.02 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 9 67337170 114567753 2 9 662 1 1 0 0 7 0.57 0.37 11 0 0 11 11 11 16 12 12 77.33 65.57 31.32 0 4 5 Whitelist BRCA-US 11 0.85 0.62 0 0 0.64 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 11 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 10 63277390 93496919 3 3 662 0 1 1 1 0 0.8 0.19 7 0 0 7 5 7 31 8 11 77.33 83.55 12.99 0 3 4 Whitelist BRCA-US 0.87 0.41 0 0 0.84 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 6 0 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 11 55709941 81062381 13 22 662 2 4 3 4 9 0.84 0.03 28 0 0 28 8 15 44 8 8 77.33 51.91 44.01 0 5 4 Whitelist BRCA-US 3 0.68 0.12 0 0 0.88 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 35 0.03 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 False positive; manually removed BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 12 42684995 95367636 2 6 662 0 2 0 0 4 0.11 0.78 10 0 0 10 6 9 26 12 12 77.33 93.49 2.83 0 6 4 Whitelist BRCA-US 20 0.62 0.94 0 0 0.48 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 8 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 13 37775397 48509223 1 4 662 0 4 0 0 0 0.01 0.07 8 0 0 8 8 8 13 11 11 77.33 95.74 4.26 0 3 4 Whitelist BRCA-US 0.21 0.21 0 0 0.16 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA After polyploidization 8 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 14 20532445 36857210 7 10 662 3 1 1 2 3 0.67 0.44 15 0 0 15 5 11 34 9 15 77.33 84.09 0 0 3 4 Whitelist BRCA-US 3 0.68 0.69 0 0 0.74 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 17 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 15 39425396 101227081 37 55 662 11 9 10 7 18 0.81 0 107 0 0 107 8 11 130 8 8 77.33 96.23 3.67 11 3 5 Whitelist BRCA-US 13_14_17_20_7 0.93 0 0 0 0.86 0 High confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 92 0.07 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 16 77930947 86186178 2 4 662 0 0 2 2 0 0.26 0.09 4 0 0 4 3 4 26 10 10 77.33 99.91 0 0 3 4 Whitelist BRCA-US 0.62 0.25 0 0 0.59 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 8 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 17 46099635 77801970 47 65 662 7 15 14 11 18 0.35 0 91 0 0 91 8 8 134 8 8 77.33 63.13 36.87 4 6 5 Whitelist BRCA-US 13_15_2_3_6 0.73 0 0 0 0.59 0 High confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 112 0.08 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 18 18824592 25143491 1 6 662 0 2 0 0 4 0.11 0.03 7 0 0 7 3 7 8 3 7 77.33 58.62 41.34 0 3 4 Whitelist BRCA-US 5 0.54 0.11 0 0 0.48 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 8 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 19 2427192 52463115 1 12 662 0 5 0 2 5 0.02 0.78 17 0 0 17 11 17 18 12 12 77.33 99.83 0 0 4 3 Whitelist BRCA-US 14 0.62 0.93 0 0 0.33 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 19 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 20 2682796 61152782 1 13 662 3 4 0 1 5 0.17 0.79 17 0 0 17 7 9 18 7 9 77.33 99.01 0 0 4 5 Whitelist BRCA-US 12_15 0.68 0.94 0 0 0.59 0 Linked to high confidence BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA With other complex events 21 0.02 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 21 NA NA 0 0 662 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.22 NA NA NA 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae 22 NA NA 0 0 662 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 NA NA NA 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 0 0 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::eadf8482-e60e-4307-adb7-d5c3b9fa6cae X 23895864 129424325 1 5 662 1 3 0 0 1 0.11 0 12 0 0 12 4 10 13 4 5 77.33 77.93 18.69 0 5 2 Whitelist BRCA-US 0.45 0 0 0 0.48 0 No BRCA-US eadf8482-e60e-4307-adb7-d5c3b9fa6cae BRCA 0.65 4.04 Breast-AdenoCA NA 9 0.01 NA 5 BRCA-US DO2706 TCGA-A2-A25B eadf8482-e60e-4307-adb7-d5c3b9fa6cae female alive C50.9 39 NA 258 NA Included Breast-AdenoCA BRCA US 0 8.49 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 1 NA NA 0 0 134 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 2 101448507 195410990 1 3 134 1 2 0 0 0 0.3 0.02 4 0 0 4 3 4 5 3 3 67.14 99.9 0 16 3 1 Whitelist BRCA-US 0.62 0.08 0 0 0.59 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 6 0.02 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 3 79936495 79965583 1 3 134 0 1 0 0 2 0.39 0.17 2 0 0 NA NA NA NA NA NA 67.14 99.88 0 5 4 5 Whitelist BRCA-US 0.87 0.39 0 0 0.59 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 4 0.01 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 4 41363151 188913782 1 2 134 2 0 0 0 0 0.11 0.01 3 NA 0 NA NA NA NA NA NA 67.14 0.01 99.88 10 2 1 Whitelist BRCA-US 0.54 0.04 NA 0 0.48 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 4 0.01 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 5 114679330 118452593 1 1 134 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 67.14 99.88 0 3 4 NA Whitelist BRCA-US 0.62 0.02 NA NA 0.59 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 2 0.01 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 6 NA NA 0 0 134 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.03 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 7 NA NA 0 0 134 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.05 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 8 42881572 135695930 19 32 134 8 3 4 4 13 0.38 0 41 0 0 41 7 7 53 7 8 67.14 65.33 31.16 19 2 8 Whitelist BRCA-US 13 0.62 0 0 0 0.59 1 High confidence BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA With other complex events 51 0.19 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 9 NA NA 0 0 134 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 10 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 11 NA NA 0 0 134 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.26 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 12 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 13 19943737 57122359 4 23 134 1 1 1 1 19 1 0 21 0 0 21 7 8 24 7 7 67.14 80.16 19.84 13 1 2 Whitelist BRCA-US 8 0.71 0 0 0 1 1 High confidence BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA With other complex events 27 0.1 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 14 61286980 67501005 1 2 134 0 0 1 1 0 0.57 0.8 1 NA 0 NA NA NA NA NA NA 67.14 96.29 0 2 4 NA Whitelist BRCA-US 0.68 0.95 NA 0 0.64 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 4 0.01 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 15 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 16 68576136 68777756 1 1 134 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 3 3 67.14 37.95 61.95 0 0 2 Whitelist BRCA-US 0.62 0.81 NA NA 0.59 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 2 0.01 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 17 NA NA 0 0 134 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0.94 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 18 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 19 15120623 57471857 1 5 134 1 1 0 1 2 0.8 0.05 4 0 0 4 3 4 10 3 3 67.14 99.83 0 12 4 3 Whitelist BRCA-US 0.93 0.16 0 0 0.84 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 8 0.03 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 20 NA NA 0 0 134 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 21 32373739 47753333 33 44 134 7 5 11 10 11 0.43 0 45 0 0 45 5 8 51 5 5 67.14 52.85 24.39 4 4 3 Whitelist BRCA-US 8_13 0.62 0 0 0 0.64 1 Low confidence BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA With other complex events 77 0.29 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e 22 NA NA 0 0 134 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 13 8 8 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::ef4cbd38-bc79-4d60-a715-647edd2ebe9e X NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US ef4cbd38-bc79-4d60-a715-647edd2ebe9e BRCA 0.77 3.15 Breast-LobularCA NA 0 0 NA 3 BRCA-US DO4018 TCGA-E2-A1LG ef4cbd38-bc79-4d60-a715-647edd2ebe9e female alive C50.9 50 NA 350 NA Included Breast-LobularCA BRCA US 0 11.51 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 2 170004858 236048230 1 2 16 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA NA NA NA 3.39 0 99.91 0 2 NA Whitelist BRCA-US 0.68 0.34 0 0 0.64 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 4 0.12 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 3 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 7 NA NA 0 0 16 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.44 NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 13 51620609 99202396 1 2 16 0 0 0 1 1 0.39 0 3 0 NA NA NA NA 5 5 5 3.39 2.99 96.83 0 2 1 Whitelist BRCA-US 0.68 0 0 NA 0.59 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 3 0.09 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 17 NA NA 0 0 16 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 20 32863323 38403593 1 3 16 0 0 1 0 2 0.39 0 5 0 0 5 5 5 11 11 11 3.39 12.58 86.35 0 1 2 Whitelist BRCA-US 0.62 0 0 0 0.59 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 4 0.12 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f05d314c-5ec5-4e2a-b785-9a702716f111 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f05d314c-5ec5-4e2a-b785-9a702716f111 BRCA 0.89 2 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO5046 TCGA-E2-A156 f05d314c-5ec5-4e2a-b785-9a702716f111 female alive C50.9 61 NA 481 NA Included Breast-AdenoCA BRCA US 0 15.82 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 1 146473725 244991894 38 45 421 10 9 10 9 7 0.99 0 70 0 0 70 9 10 77 9 13 87.54 95.59 4.41 0 4 3 Whitelist BRCA-US 0.92 0 0 0 1 1 High confidence BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA With other complex events 83 0.1 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 2 142675417 192441340 1 4 421 1 2 0 0 1 0.3 0 7 0 0 7 3 7 11 3 3 87.54 99.02 0.87 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 3 29887979 29985640 1 2 421 0 2 0 0 0 0.11 0 2 0 0 NA NA NA 7 5 5 87.54 99.88 0 0 4 5 Whitelist BRCA-US 0.54 0 0 0 0.48 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 4 NA NA 0 0 421 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 5 83263699 136620879 1 2 421 0 1 1 0 0 0.57 0 5 0 0 5 3 5 7 5 7 87.54 97.18 0 0 3 4 Whitelist BRCA-US 0.68 0 0 0 0.64 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 6 38276863 39745407 3 3 421 1 0 2 0 0 0.3 0 1 0 0 NA NA NA 13 6 6 87.54 39.65 60.2 0 4 NA Whitelist BRCA-US 0.62 0.01 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 7 15178340 156075811 1 7 421 2 3 0 0 2 0.14 0 8 0 0 8 4 8 9 4 9 87.54 99.78 0 0 3 5 Whitelist BRCA-US 1 0.68 0.01 0 0 0.59 1 Linked to high confidence BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA With other complex events 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 8 9070962 98658630 34 46 421 11 5 11 7 12 0.37 0 85 0 0 85 3 7 99 3 6 87.54 96.58 0 7 6 17 Whitelist BRCA-US 1_12 0.62 0 0 0 0.59 1 Linked to high confidence BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA With other complex events 80 0.1 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 9 15466986 33405837 3 3 421 1 1 0 1 0 0.8 0.06 3 0 0 NA NA NA 12 12 12 87.54 74.27 25 0 2 3 Whitelist BRCA-US 0.87 0.18 0 0 0.84 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 10 NA NA 0 0 421 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 11 64649854 90375457 70 78 421 17 19 13 21 8 0.57 0 90 0 0 90 4 8 92 4 8 87.54 99.5 0.07 8 13 3 Whitelist BRCA-US 0.62 0 0 0 0.64 1 Low confidence BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA With other complex events 148 0.18 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 12 689576 131594460 1 6 421 1 2 0 0 3 0.3 0 8 0 0 8 5 7 9 5 5 87.54 99.99 0 0 4 3 Whitelist BRCA-US 0.68 0 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 13 84357529 84695209 1 1 421 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 5 3 3 87.54 65.94 34.06 0 4 NA Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 14 35089300 103819652 1 3 421 1 2 0 0 0 0.3 0 5 0 0 5 3 5 5 3 5 87.54 99.09 0 0 4 5 Whitelist BRCA-US 0.62 0.01 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 15 50482448 50575885 1 1 421 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 87.54 95.03 0.09 0 2 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 16 34284218 34788831 3 3 421 0 0 2 1 0 0.3 0.36 2 0 0 NA NA NA 30 6 7 87.54 72.13 27.86 0 2 4 Whitelist BRCA-US 0.62 0.62 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 17 22038970 67294772 20 39 421 6 5 2 7 19 0.42 0 52 0 0 52 7 10 93 7 10 87.54 94.42 0 0 3 5 Whitelist BRCA-US 0.7 0 0 0 0.63 1 High confidence BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA With other complex events 59 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 18 5441033 63171035 5 7 421 0 0 4 1 2 0.04 0.76 12 0 0 12 5 12 12 5 5 87.54 75.19 20.13 9 3 2 Whitelist BRCA-US 0.47 0.93 0 0 0.36 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 19 17315158 35775111 1 3 421 1 2 0 0 0 0.3 0.08 5 0 0 5 3 5 7 3 7 87.54 99.83 0 0 3 4 Whitelist BRCA-US 0.62 0.22 0 0 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 20 6046983 13783911 5 21 421 0 2 1 2 16 0.53 0 17 0 0 17 4 5 50 4 5 87.54 76.41 22.61 0 2 4 Whitelist BRCA-US 0.46 0 0 0 0.64 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 26 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 21 NA NA 0 0 421 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 22 43381465 44734822 1 1 421 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 87.54 100 0 0 3 4 Whitelist BRCA-US 0.62 0.74 NA NA 0.59 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f0787165-6f58-4d67-b510-928eea2c4882 X 111048097 139458472 1 2 421 0 2 0 0 0 0.11 0 5 0 0 5 3 3 8 3 4 87.54 96.61 0 0 5 2 Whitelist BRCA-US 0.54 0 0 0 0.48 1 No BRCA-US f0787165-6f58-4d67-b510-928eea2c4882 BRCA 0.69 3.99 Breast-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:3 4 BRCA-US DO4766 TCGA-E2-A109 f0787165-6f58-4d67-b510-928eea2c4882 female alive C50.9 64 NA 1172 NA Included Breast-AdenoCA BRCA US 0 38.55 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 1 160014523 221327067 2 3 179 1 0 0 1 1 0.57 0 7 0 0 7 4 7 23 7 8 81.81 99.98 0 0 6 7 Whitelist BRCA-US 0.62 0.01 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 2 16757311 150416613 8 9 179 0 0 4 4 1 0.05 0.18 31 0 0 31 13 13 33 13 13 81.81 97.29 0.03 1 4 5 Whitelist BRCA-US 0.62 0.39 0 0 0.46 1 High confidence BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA With other complex events 17 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 3 74446444 89685225 2 3 179 0 1 0 1 1 0.57 0.3 10 0 0 10 4 7 31 6 9 81.81 95.88 1 0 1 2 Whitelist BRCA-US 0.87 0.55 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 4 171564967 171586699 1 1 179 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 81.81 6.73 90.76 0 1 2 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 5 285404 96104283 1 2 179 1 1 0 0 0 0.57 0.22 4 0 0.02 4 0 3 8 3 3 81.81 97.1 0.24 2 4 7 Whitelist BRCA-US 0.68 0.45 0 0.02 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 6 NA NA 0 0 179 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.01 NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 7 62474285 101131925 11 17 179 2 2 3 4 6 0.8 0 30 0 0 30 18 19 32 19 21 81.81 99.78 0 1 4 3 Whitelist BRCA-US 0.87 0 0 0 0.84 1 High confidence BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA After polyploidization 28 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 8 39231540 40199958 2 2 179 0 0 1 1 0 0.57 0.31 5 0 0 5 3 3 12 3 4 81.81 99.99 0 1 6 4 Whitelist BRCA-US 0.68 0.55 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 9 94389497 94428616 2 2 179 0 0 1 1 0 0.57 0 4 0 0 4 3 4 22 4 6 81.81 96.86 0 6 6 4 Whitelist BRCA-US 0.68 0.01 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 10 42837168 47567873 1 2 179 0 1 1 0 0 0.57 0.29 3 0 0 NA NA NA 13 12 12 81.81 97.8 2.03 1 3 4 Whitelist BRCA-US 0.68 0.53 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 11 NA NA 0 0 179 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist BRCA-US NA 0.21 NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 12 15014157 131294963 8 19 179 2 0 3 3 11 0.39 0 22 0 0 22 6 10 26 6 6 81.81 95.82 3.45 3 3 4 Whitelist BRCA-US 0.81 0 0 0 0.59 1 Low confidence BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA With other complex events 27 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 13 NA NA 0 0 179 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.77 NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 14 22155584 70211328 1 4 179 0 2 0 0 2 0.11 0.83 8 0 0 8 3 4 11 6 6 81.81 84.09 0 0 3 4 Whitelist BRCA-US 0.68 0.97 0 0 0.48 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 15 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 16 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 17 NA NA 0 0 179 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BRCA-US NA 0.85 NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 18 NA NA 0 0 179 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 1 0 NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 19 8753477 29511157 1 6 179 1 2 0 1 2 0.57 0 6 0 0 6 3 4 15 4 5 81.81 68.44 24.28 0 2 5 Whitelist BRCA-US 0.93 0 0 0 0.64 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 20 13317849 13356225 1 1 179 1 0 0 0 0 0.39 0.11 2 0 NA NA NA NA 11 5 5 81.81 91.83 0 0 5 6 Whitelist BRCA-US 0.62 0.29 0 NA 0.59 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 21 NA NA 0 0 179 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.91 NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 22 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f45210d3-9e66-4f5e-bef1-5ee5547cc893 X 64048649 139724918 6 12 179 3 0 1 2 6 0.34 0 19 0 0 19 6 12 31 7 11 81.81 96.27 0.01 1 4 5 Whitelist BRCA-US 0.68 0 0 0 0.59 1 Low confidence BRCA-US f45210d3-9e66-4f5e-bef1-5ee5547cc893 BRCA 0.84 3.82 Breast-AdenoCA With other complex events 18 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:3 3 BRCA-US DO6231 TCGA-EW-A1PC f45210d3-9e66-4f5e-bef1-5ee5547cc893 female alive C50.9 66 NA 187 NA Included Breast-AdenoCA BRCA US 0 6.15 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 1 NA NA 0 0 49 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.4 NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 2 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 3 NA NA 0 0 49 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.5 NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 4 NA NA 0 0 49 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.5 NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 5 57675432 57799577 1 1 49 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 12.34 0.07 99.79 0 2 3 Whitelist BRCA-US 0.62 0.62 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 6 41930650 151992867 1 3 49 1 2 0 0 0 0.3 1 5 0 0 5 3 5 5 3 3 12.34 0.08 99.77 0 2 1 Whitelist BRCA-US 0.62 1 0 0 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 6 0.06 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 7 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 8 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 9 135140470 135151372 1 1 49 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.34 49.59 47.89 0 3 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 10 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 11 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 12 95118441 96694110 1 1 49 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 12.34 1.18 98.74 0 2 3 Whitelist BRCA-US 0.62 0.9 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 13 61103190 61115669 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.34 0 99.86 0 2 NA Whitelist BRCA-US 0.62 1 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 14 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 15 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 16 23561721 25927338 1 1 49 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 8 6 6 12.34 99.89 0 0 3 4 Whitelist BRCA-US 0.62 0.14 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 17 49337625 73767807 23 31 49 6 5 4 8 8 0.68 0 35 0 0 35 5 5 41 5 5 12.34 82.02 12.71 0 5 4 Whitelist BRCA-US 0.68 0 0 0 0.75 0 Low confidence BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA With other complex events 54 0.55 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 18 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 19 36404243 36694208 1 1 49 0 1 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 12.34 0.49 99.34 0 2 3 Whitelist BRCA-US 0.62 0.84 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 20 NA NA 0 0 49 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BRCA-US NA 0 0 NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 21 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea 22 33416676 33471752 1 1 49 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 12.34 99.89 0.11 0 1 2 Whitelist BRCA-US 0.62 0.69 NA NA 0.59 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 2 0.02 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f51af6db-2655-47fb-9ffc-83a503a728ea X NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 0 No BRCA-US f51af6db-2655-47fb-9ffc-83a503a728ea BRCA 0.87 2.04 Breast-AdenoCA NA 0 0 NA 2 BRCA-US DO3412 TCGA-AN-A0XR f51af6db-2655-47fb-9ffc-83a503a728ea female alive C50.9 55 NA 10 NA Included Breast-AdenoCA BRCA US 0 0.33 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 1 35990026 247286436 1 3 320 0 3 0 0 0 0.03 0 7 0 0 7 4 4 8 4 4 26.89 56.71 43.29 0 3 4 Whitelist BRCA-US 0.41 0 0 0 0.33 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 2 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 3 20060433 168725245 2 11 320 1 0 0 1 9 0.57 0.08 13 0 0 13 5 7 14 5 6 26.89 76.47 20.36 0 3 2 Whitelist BRCA-US 0.62 0.22 0 0 0.64 1 Linked to low confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA With other complex events 13 0.02 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 4 140599465 173380457 6 8 320 2 2 1 1 2 0.88 0.02 13 0 0 13 8 13 14 8 8 26.89 26.25 73.52 0 1 4 Whitelist BRCA-US 0.62 0.07 0 0 0.91 1 High confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA Before polyploidization 14 0.02 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 5 64744362 132233192 1 5 320 0 3 0 0 2 0.03 0.02 6 0 0 6 3 6 11 5 5 26.89 2.55 97.32 0 2 3 Whitelist BRCA-US 6 0.45 0.08 0 0 0.33 1 Linked to high confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA With other complex events 8 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 6 15272594 170042856 14 32 320 4 2 5 3 18 0.7 0 41 0 0 41 10 11 43 10 11 26.89 50.06 49.76 0 1 3 Whitelist BRCA-US 0.92 0.01 0 0 0.78 1 High confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA With other complex events 46 0.07 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 7 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 8 129098764 129372224 4 5 320 1 1 1 1 1 1 0 3 0 0 NA NA NA 11 6 6 26.89 59.85 40.14 0 4 5 Whitelist BRCA-US 0.93 0.01 0 0 1 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 9 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 9 16184866 16609861 1 1 320 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 26.89 1.37 98.32 0 1 2 Whitelist BRCA-US 0.62 0.01 NA NA 0.59 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 10 8888793 9301863 2 3 320 0 2 0 0 1 0.11 0.18 5 0 0 5 3 4 18 8 13 26.89 31.33 68.49 0 4 2 Whitelist BRCA-US 0.62 0.4 0 0 0.48 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 5 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 11 59328137 82524424 32 108 320 12 6 8 6 76 0.39 0 77 0 0 77 4 5 88 5 5 26.89 40.43 59.14 1 2 3 Whitelist BRCA-US 3 0.83 0 0 0 0.59 1 Low confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA With other complex events 140 0.22 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 12 6396630 6686113 1 1 320 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 26.89 99.92 0 0 3 4 Whitelist BRCA-US 0.62 0 NA NA 0.59 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 13 NA NA 0 0 320 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0 NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 14 38490615 38606689 1 1 320 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.89 0 99.09 0 2 NA Whitelist BRCA-US 0.62 0.01 NA NA 0.59 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 15 NA NA 0 0 320 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA 0.06 NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 16 NA NA 0 0 320 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist BRCA-US NA 0.63 0 NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 17 26949478 66253676 77 161 320 19 20 21 17 84 0.93 0 81 0 0 81 4 5 90 4 5 26.89 64.02 31.55 7 3 5 Whitelist BRCA-US 3 0.99 0 0 0 0.95 1 Low confidence BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA With other complex events 238 0.37 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 18 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 19 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 20 17604471 48686372 1 4 320 1 1 0 0 2 0.57 1 2 0 0 NA NA NA NA NA NA 26.89 49.59 49.34 0 2 3 Whitelist BRCA-US 0.62 1 0 0 0.64 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 6 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 21 39068470 39080761 1 1 320 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 26.89 0 77.35 0 2 NA Whitelist BRCA-US 0.62 0.42 NA NA 0.59 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 2 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad 22 NA NA 0 0 320 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BRCA-US NA NA NA NA NA 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 0 0 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BRCA-US::f6e1ec78-5ad9-4879-9b7e-262d17b166ad X 55215736 114935312 1 2 320 0 2 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 26.89 1.45 98.32 0 2 NA Whitelist BRCA-US 0.54 0 NA 0 0.48 1 No BRCA-US f6e1ec78-5ad9-4879-9b7e-262d17b166ad BRCA 0.53 2.23 Breast-AdenoCA NA 4 0.01 NA 3 BRCA-US DO2078 TCGA-BH-A18R f6e1ec78-5ad9-4879-9b7e-262d17b166ad female deceased C50.9 50 1142 NA NA Included Breast-AdenoCA BRCA US 1 37.57 BTCA-SG::BTCA_donor_27 1 53639038 224002209 1 2 10 1 1 0 0 0 0.57 0.18 3 NA 0 NA NA NA NA NA NA 24.1 0.12 99.87 0 2 3 Whitelist BTCA-SG 0.68 0.4 NA 0 0.64 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 4 0.2 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 2 45722401 71773675 1 2 10 0 2 0 0 0 0.11 0.2 4 NA 0 4 4 4 5 5 5 24.1 0.15 99.75 0 2 4 Whitelist BTCA-SG 0.54 0.43 NA 0 0.48 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 4 0.2 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 3 172286069 172533432 1 1 10 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 24.1 0.12 99.73 1 2 3 Whitelist BTCA-SG 0.62 0.76 NA NA 0.59 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 2 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 4 66878917 169431349 1 2 10 0 2 0 0 0 0.11 0.14 4 NA 0 4 4 4 6 5 5 24.1 97.63 0 0 1 3 Whitelist BTCA-SG 0.54 0.34 NA 0 0.48 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 4 0.2 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 13 45551070 45983982 1 1 10 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 4 3 3 24.1 1.27 84.57 0 2 3 Whitelist BTCA-SG 0.62 0.54 NA NA 0.59 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 2 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 19 6394363 12277130 1 1 10 0 0 1 0 0 0.39 0.18 3 NA NA NA NA NA 8 4 6 24.1 52.02 47.8 0 2 4 Whitelist BTCA-SG 0.62 0.4 NA NA 0.59 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 2 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 20 21399527 21621866 1 1 10 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 24.1 0.35 98.67 0 2 3 Whitelist BTCA-SG 0.62 0.42 NA NA 0.59 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 2 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_27 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_27 BTCA 0.23 1.84 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 BTCA-SG DO218139 BTCA_donor_27 male deceased C24.0 45 578 NA NA Included Biliary-AdenoCA BTCA SG 1 19.01 BTCA-SG::BTCA_donor_A035 1 3354199 172282365 4 4 80 1 0 2 1 0 0.57 0.83 5 0 0 5 5 5 9 9 9 15 10.77 89.23 0 1 2 Whitelist BTCA-SG 0.68 0.97 0 0 0.64 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 8 0.05 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 2 78139213 78497874 2 2 80 0 0 1 1 0 0.57 0.42 3 0 0 NA NA NA 7 7 7 15 0.32 99.58 1 2 1 Whitelist BTCA-SG 0.68 0.66 0 0 0.64 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 4 0.02 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 3 60472361 60533410 1 1 80 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 15 0.03 99.92 0 1 2 Whitelist BTCA-SG 0.62 0.15 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 4 176000084 176938280 1 1 80 1 0 0 0 0 0.39 0.37 2 0 NA NA NA NA NA NA NA 15 0.49 99.41 0 1 2 Whitelist BTCA-SG 0.62 0.63 0 NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 5 111270004 164396436 1 3 80 3 0 0 0 0 0.03 1 6 0 0 6 6 6 10 10 10 15 10.43 86.91 0 1 2 Whitelist BTCA-SG 0.41 1 0 0 0.33 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 6 0.04 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 6 156423046 156485183 2 2 80 0 0 1 1 0 0.57 0.34 2 0 0 NA NA NA 5 5 5 15 0.45 99.38 0 1 2 Whitelist BTCA-SG 0.68 0.59 0 0 0.64 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 4 0.02 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 7 67775225 153222328 1 4 80 3 1 0 0 0 0.11 0.62 6 0 0 6 3 4 7 3 3 15 99.76 0.02 0 3 1 Whitelist BTCA-SG 0.54 0.83 0 0 0.48 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 8 0.05 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 8 NA NA 0 0 80 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.41 NA NA NA 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 9 21969561 33332343 2 2 80 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 9 8 8 15 76.97 22.33 0 1 NA Whitelist BTCA-SG 0.68 0.02 0 0 0.64 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 4 0.02 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 10 70976286 71043095 1 1 80 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 15 0.05 99.77 0 2 3 Whitelist BTCA-SG 0.62 0.52 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 11 2611961 3589669 1 1 80 1 0 0 0 0 0.39 1 2 0.2 NA NA NA NA NA NA NA 15 0.72 98.85 0 1 2 Whitelist BTCA-SG 0.62 1 0.2 NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 12 6550042 131466444 1 4 80 2 0 2 0 0 0.26 0.43 8 0 0 8 7 8 9 7 7 15 1.86 98.05 0 2 1 Whitelist BTCA-SG 0.62 0.68 0 0 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 8 0.05 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 13 58447186 58798206 1 1 80 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 15 0.3 99.7 0 1 2 Whitelist BTCA-SG 0.62 0.76 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 14 103342956 103945627 5 5 80 2 1 1 1 0 0.9 0 8 0 0 8 6 8 15 13 13 15 1.21 97.87 0 2 1 Whitelist BTCA-SG 0.93 0 0 0 0.92 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 10 0.06 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 15 54552296 54565863 1 1 80 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 15 0.01 99.99 0 1 2 Whitelist BTCA-SG 0.62 0.9 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 16 31296678 78731033 1 3 80 3 0 0 0 0 0.03 0.48 6 0 0 6 6 6 7 7 7 15 0.38 99.52 0 1 2 Whitelist BTCA-SG 0.41 0.72 0 0 0.33 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 6 0.04 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 17 11833751 77154357 1 8 80 2 0 1 0 5 0.3 0 13 0 0 13 6 10 14 6 6 15 53.18 42.39 0 2 3 Whitelist BTCA-SG 0.62 0.01 0 0 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 11 0.07 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 18 47004633 48800087 1 1 80 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 15 99.96 0 0 1 3 Whitelist BTCA-SG 0.62 0.9 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 19 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 20 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 21 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 22 45059741 45242212 1 1 80 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 15 0 100 0 2 NA Whitelist BTCA-SG 0.62 0.49 NA NA 0.59 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 2 0.01 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A035 X 6592847 151097257 1 8 80 6 0 2 0 0 0.01 0.01 12 0 0 12 12 12 13 13 13 15 17.95 81.82 3 1 2 Whitelist BTCA-SG 0.21 0.03 0 0 0.16 0 No BTCA-SG BTCA_donor_A035 BTCA 0.77 2.01 Biliary-AdenoCA NA 16 0.1 NA 2 BTCA-SG DO218351 BTCA_donor_A035 female deceased C22.1 49 167 NA NA Included Biliary-AdenoCA BTCA SG 1 5.49 BTCA-SG::BTCA_donor_A096 1 120690998 248630158 214 215 292 47 56 62 49 1 0.45 0 291 0 0 291 21 25 295 21 25 44.53 96.71 0 70 5 6 Whitelist BTCA-SG 0.68 0 0 0 0.64 1 High confidence BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA With other complex events 429 0.73 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 2 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 3 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 4 20217623 140834701 1 3 292 2 0 0 0 1 0.11 0 4 0 0 4 4 4 5 5 5 44.53 7.21 92.54 0 1 2 Whitelist BTCA-SG 0.62 0 0 0 0.48 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 5 54091086 58712097 1 1 292 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 10 5 8 44.53 9.65 87.66 0 2 5 Whitelist BTCA-SG 0.62 0 NA NA 0.59 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 6 NA NA 0 0 292 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0 NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 7 NA NA 0 0 292 0 0 0 0 0 NA 0 NA NA NA NA NA NA 10 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0 NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 8 103659644 103847721 1 1 292 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 44.53 0.13 99.86 0 2 3 Whitelist BTCA-SG 0.62 0 NA NA 0.59 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 9 29158011 133531709 2 2 292 0 1 0 1 0 0.57 0.37 10 0 0 10 5 8 19 5 7 44.53 25.22 71.7 1 2 3 Whitelist BTCA-SG 0.68 0.62 0 0 0.64 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 10 89141300 118886626 2 2 292 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 6 4 6 44.53 94.88 4.94 0 3 4 Whitelist BTCA-SG 0.68 0.07 0 0 0.64 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 11 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 12 1297595 132243589 26 26 292 8 7 6 5 0 0.86 0 47 0 0 47 6 14 48 6 9 44.53 50.98 48.94 0 2 3 Whitelist BTCA-SG 0.92 0 0 0 0.9 1 Low confidence BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA With other complex events 52 0.09 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 13 48899585 49409864 1 2 292 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 6 5 5 44.53 0.3 96.92 0 0 2 Whitelist BTCA-SG 0.54 0.03 NA 0 0.48 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 14 NA NA 0 0 292 0 0 0 0 0 NA 0.24 NA 0 NA NA NA NA 8 0 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.47 0 NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 15 47440255 47931147 2 2 292 1 0 0 1 0 0.57 0.07 5 0 0 5 5 5 7 7 7 44.53 0.22 99.78 0 3 2 Whitelist BTCA-SG 0.68 0.21 0 0 0.64 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 16 NA NA 0 0 292 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.03 NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 17 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 18 18873445 62863653 7 7 292 3 2 1 1 0 0.67 0.37 16 0 0 16 4 4 18 4 6 44.53 94.86 0 0 1 4 Whitelist BTCA-SG 0.77 0.62 0 0 0.74 1 Low confidence BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA With other complex events 14 0.02 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 19 11882847 38652316 1 1 292 0 0 0 1 0 0.39 1 5 0 0 5 0 3 11 0 3 44.53 40.32 52.4 0 2 3 Whitelist BTCA-SG 0.62 1 0 0 0.59 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 20 51573821 52870600 1 1 292 0 0 1 0 0 0.39 0.02 2 NA NA NA NA NA 8 3 3 44.53 37.85 61.14 0 4 6 Whitelist BTCA-SG 0.62 0.09 NA NA 0.59 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 21 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 22 NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A096 X NA NA 0 0 292 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_A096 BTCA 0.63 2.77 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 BTCA-SG DO218440 BTCA_donor_A096 female deceased C24.0 76 440 NA NA Included Biliary-AdenoCA BTCA SG 1 14.47 BTCA-SG::BTCA_donor_A153 1 218376406 246159643 7 7 116 2 1 2 2 0 0.93 0 8 0 0 8 5 8 21 5 5 76.32 90.19 9.8 0 4 2 Whitelist BTCA-SG 0.96 0 0 0 0.95 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 2 43629930 202804964 1 2 116 1 1 0 0 0 0.57 0.02 4 0 0 4 3 4 5 3 3 76.32 99.83 0.05 0 4 2 Whitelist BTCA-SG 0.68 0.07 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 3 11622416 41993885 2 2 116 0 0 1 1 0 0.57 0.27 3 0 0 NA NA NA 13 4 6 76.32 89.78 10.08 3 4 2 Whitelist BTCA-SG 0.68 0.52 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 4 91809687 188357995 1 3 116 2 1 0 0 0 0.3 0.09 7 0 0 7 3 5 7 3 5 76.32 99.79 0.11 1 3 1 Whitelist BTCA-SG 0.62 0.25 0 0 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 5 130541515 151805083 2 4 116 0 0 1 1 2 0.57 0.17 3 0 0 NA NA NA 7 5 7 76.32 99.88 0 0 4 6 Whitelist BTCA-SG 0.62 0.39 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 6 36165437 108436463 11 12 116 3 2 2 4 1 0.8 0 28 0 0 28 5 10 35 5 10 76.32 9.03 87.78 4 2 4 Whitelist BTCA-SG 0.93 0 0 0 0.84 0 Low confidence BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA With other complex events 23 0.1 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 7 110374345 110411241 1 1 116 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 3 76.32 97.27 0 0 4 6 Whitelist BTCA-SG 0.62 0.26 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 8 NA NA 0 0 116 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.12 NA NA NA 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 9 130866985 130957201 1 1 116 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 6 5 6 76.32 96.88 0 0 3 4 Whitelist BTCA-SG 0.62 0.84 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 10 56900139 57383767 1 1 116 0 0 0 1 0 0.39 0.18 2 NA NA NA NA NA 5 3 3 76.32 99.82 0 0 5 8 Whitelist BTCA-SG 0.62 0.4 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 11 31536787 31794625 2 2 116 2 0 0 0 0 0.11 0.38 1 0 0 NA NA NA 8 3 4 76.32 96.54 0 0 5 NA Whitelist BTCA-SG 0.54 0.63 0 0 0.48 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 12 53960940 78313043 1 3 116 2 1 0 0 0 0.3 0.66 5 0 0 5 3 5 7 3 5 76.32 95.79 4.19 0 4 2 Whitelist BTCA-SG 0.62 0.87 0 0 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 13 NA NA 0 0 116 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.69 NA NA NA 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 14 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 15 67290939 67346955 1 1 116 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 76.32 100 0 0 4 6 Whitelist BTCA-SG 0.62 0.63 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 16 62926302 78625791 1 2 116 1 1 0 0 0 0.57 1 5 0 0 5 3 5 5 3 5 76.32 99.85 0.04 0 4 2 Whitelist BTCA-SG 0.68 1 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 17 37015648 59403227 2 2 116 1 0 0 1 0 0.57 0.25 6 0 0 6 3 6 11 3 4 76.32 59.6 35.97 0 4 6 Whitelist BTCA-SG 0.68 0.49 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 18 10829 34733961 12 12 116 1 5 3 3 0 0.45 0 10 0 0 10 3 6 14 3 3 76.32 31.43 68.56 13 2 4 Whitelist BTCA-SG 0.68 0 0 0 0.64 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 24 0.1 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 19 820612 1457502 1 1 116 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 3 76.32 99.33 0 0 4 8 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 20 NA NA 0 0 116 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 21 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 22 19047944 51176657 5 5 116 0 0 3 2 0 0.14 0 19 0 0 19 5 6 23 7 8 76.32 88.64 0 0 5 7 Whitelist BTCA-SG 0.62 0 0 0 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_A153 X 82468155 138751020 1 1 116 0 0 0 1 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 76.32 1.74 98.26 0 2 NA Whitelist BTCA-SG 0.62 0.12 NA NA 0.59 0 No BTCA-SG BTCA_donor_A153 BTCA 0.42 3.59 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 BTCA-SG DO218695 BTCA_donor_A153 male deceased C24.0 60 360 NA NA Included Biliary-AdenoCA BTCA SG 1 11.84 BTCA-SG::BTCA_donor_B070 1 152201706 162468614 47 48 166 9 14 15 9 1 0.45 0 74 0 0 74 4 5 89 4 5 70.56 74.52 22.5 0 8 7 Whitelist BTCA-SG 0.62 0 0 0 0.64 1 Low confidence BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA With other complex events 95 0.29 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 2 20441798 103903432 1 3 166 1 1 0 0 1 0.57 0 5 NA 0 5 3 5 8 3 3 70.56 99.86 0.05 2 4 2 Whitelist BTCA-SG 0.87 0 NA 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 3 119549123 157678696 6 6 166 2 0 3 1 0 0.34 0.45 13 0 0 13 13 13 33 16 17 70.56 71.96 27.92 1 2 4 Whitelist BTCA-SG 0.62 0.69 0 0 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 4 5784677 5838986 1 1 166 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 70.56 0.05 99.93 0 2 3 Whitelist BTCA-SG 0.62 0 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 5 26340410 99382150 1 3 166 1 2 0 0 0 0.3 0.04 7 0 0 7 4 7 12 6 6 70.56 76.12 23.76 0 2 3 Whitelist BTCA-SG 0.62 0.13 0 0 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 6 62624732 131616233 1 4 166 3 1 0 0 0 0.11 0.14 10 0 0 10 5 8 11 5 5 70.56 3.8 96.05 1 2 3 Whitelist BTCA-SG 0.54 0.33 0 0 0.48 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 7 26791653 27432047 3 3 166 0 1 1 1 0 0.8 1 4 0 0 4 4 4 14 7 7 70.56 99.78 0 1 5 6 Whitelist BTCA-SG 0.87 1 0 0 0.84 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 8 71661312 77696256 1 2 166 0 1 0 1 0 0.57 0.05 3 0 0 NA NA NA 5 5 5 70.56 99.99 0 0 4 5 Whitelist BTCA-SG 0.68 0.17 0 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 9 77216605 77535692 2 2 166 0 0 1 1 0 0.57 0.84 2 0 0 NA NA NA 18 5 5 70.56 80.52 18.77 0 2 3 Whitelist BTCA-SG 0.68 0.98 0 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 10 82315913 104588990 1 1 166 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 70.56 99.83 0 0 1 4 Whitelist BTCA-SG 0.62 0.04 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 11 30908932 30954117 2 2 166 0 1 1 0 0 0.57 0.58 4 0 0 4 0 3 16 3 3 70.56 73.67 25.91 0 1 8 Whitelist BTCA-SG 0.68 0.8 0 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 12 50014770 101990427 1 3 166 0 1 1 1 0 0.8 0.09 4 0 0 4 3 4 6 3 3 70.56 35.44 64.48 1 2 1 Whitelist BTCA-SG 0.87 0.26 0 0 0.84 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 13 50844292 51001851 1 1 166 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 7 3 5 70.56 100 0 0 1 3 Whitelist BTCA-SG 0.62 0.33 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 14 NA NA 0 0 166 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.21 NA NA NA 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 15 NA NA 0 0 166 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.59 NA NA NA 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 16 59147331 59242448 1 1 166 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 70.56 99.91 0 0 3 5 Whitelist BTCA-SG 0.62 0.59 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 17 28045224 28060927 2 2 166 1 0 1 0 0 0.57 0.81 2 0 0 NA NA NA 9 3 4 70.56 98.87 1.12 0 1 2 Whitelist BTCA-SG 0.68 0.95 0 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 18 3932201 20427723 2 2 166 0 0 1 1 0 0.57 0.63 7 0 0 7 4 6 12 6 6 70.56 76.87 23.09 0 2 3 Whitelist BTCA-SG 0.68 0.85 0 0 0.64 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 19 8183835 57827516 25 25 166 5 4 9 7 0 0.5 0 67 0 0 67 8 15 69 8 10 70.56 77.42 21.89 5 3 5 Whitelist BTCA-SG 0.68 0 0 0 0.64 1 High confidence BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA With other complex events 50 0.15 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 20 14683690 14772400 1 1 166 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 70.56 99.69 0 0 4 6 Whitelist BTCA-SG 0.62 0.52 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 21 NA NA 0 0 166 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.9 NA NA NA 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 22 NA NA 0 0 166 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B070 X 138697086 138738567 1 1 166 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 5 5 70.56 47.81 52.19 0 1 2 Whitelist BTCA-SG 0.62 0.08 NA NA 0.59 1 No BTCA-SG BTCA_donor_B070 BTCA 0.56 2.93 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 BTCA-SG DO218550 BTCA_donor_B070 male deceased C24.0 61 456 NA NA Included Biliary-AdenoCA BTCA SG 1 15 BTCA-SG::BTCA_donor_B083 1 175210783 246161909 14 14 112 3 2 7 2 0 0.18 0.01 16 0 0 16 5 6 21 6 7 28.35 36.71 62.97 13 2 1 Whitelist BTCA-SG 0.62 0.04 0 0 0.59 0 Low confidence BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA With other complex events 28 0.12 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 2 59869041 161128043 1 3 112 1 1 1 0 0 0.8 0.17 1 0 0 NA NA NA NA NA NA 28.35 0.95 98.96 0 2 NA Whitelist BTCA-SG 0.87 0.38 0 0 0.84 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 3 59846924 59941203 1 1 112 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 28.35 0.05 99.92 0 1 2 Whitelist BTCA-SG 0.62 0.03 NA NA 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 4 2189376 19547022 2 7 112 1 1 0 0 5 0.57 0.57 9 0 0 9 6 6 16 7 7 28.35 23.32 74.31 0 1 2 Whitelist BTCA-SG 0.54 0.79 0 0 0.64 0 Linked to low confidence BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA Canonical without polyploidization 9 0.04 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 5 58294181 58670036 1 1 112 1 0 0 0 0 0.39 0.17 2 NA 0 NA NA NA 5 5 5 28.35 18.83 81.05 0 1 2 Whitelist BTCA-SG 0.62 0.38 NA 0 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 6 26101041 26114728 1 1 112 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 28.35 0 99.85 0 2 NA Whitelist BTCA-SG 0.62 0.07 NA NA 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 7 108144836 109597049 1 2 112 1 0 0 0 1 0.39 1 4 0 NA 4 0 4 6 0 3 28.35 1.19 98.58 0 1 3 Whitelist BTCA-SG 0.68 1 0 NA 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 8 NA NA 0 0 112 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.16 NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 9 78499051 101460459 1 1 112 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 4 4 4 28.35 47.98 51.88 0 1 2 Whitelist BTCA-SG 0.62 0.58 NA NA 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 10 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 11 67009701 81533568 1 5 112 1 1 0 1 2 0.8 0.25 10 0 0 10 3 4 14 4 4 28.35 85.86 13.71 4 1 2 Whitelist BTCA-SG 0.93 0.5 0 0 0.84 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 12 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 13 NA NA 0 0 112 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.81 NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 14 35121332 87977558 23 23 112 6 1 8 8 0 0.13 0 37 0 0 37 4 9 37 4 6 28.35 92.4 6.69 0 1 3 Whitelist BTCA-SG 0.62 0 0 0 0.54 0 Low confidence BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA With other complex events 46 0.21 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 15 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 16 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 17 10513417 11963355 3 3 112 0 1 1 1 0 0.8 0.55 5 0 0 5 5 5 6 5 5 28.35 27.3 68.22 0 1 0 Whitelist BTCA-SG 0.87 0.78 0 0 0.84 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 18 22541678 77433482 13 14 112 2 6 3 2 1 0.35 0 16 0 0 16 5 5 19 5 5 28.35 63.2 30.5 2 2 1 Whitelist BTCA-SG 0.68 0 0 0 0.59 0 Low confidence BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA With other complex events 27 0.12 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 19 NA NA 0 0 112 0 0 0 0 0 NA 1 NA NA NA NA NA NA 11 4 7 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 20 14111456 15815774 1 2 112 2 0 0 0 0 0.11 0.31 4 0 0 4 4 4 5 5 5 28.35 0.7 98.33 0 1 2 Whitelist BTCA-SG 0.54 0.56 0 0 0.48 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 21 23827133 23854863 1 1 112 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 6 6 28.35 26.42 50.93 0 1 2 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 22 32803334 45752862 6 9 112 1 2 1 2 3 0.88 0 14 0 0 14 4 6 24 7 7 28.35 70.63 18.26 0 2 1 Whitelist BTCA-SG 4 0.68 0 0 0 0.91 0 Low confidence BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA With other complex events 15 0.07 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_B083 X NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_B083 BTCA 0.45 1.9 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 BTCA-SG DO218417 BTCA_donor_B083 female deceased C22.1 53 266 NA NA Included Biliary-AdenoCA BTCA SG 1 8.75 BTCA-SG::BTCA_donor_C080 1 26818306 248193948 1 4 142 4 0 0 0 0 0.01 0.12 11 0 0 11 5 9 11 5 9 57.92 96.74 0.29 3 3 1 Whitelist BTCA-SG 0.21 0.3 0 0 0.16 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 2 164158539 242181368 1 6 142 1 0 1 0 4 0.57 0.88 10 0 0 10 3 6 16 3 7 57.92 76.81 23.09 0 1 3 Whitelist BTCA-SG 8 0.68 1 0 0 0.64 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 3 59750481 195636891 1 4 142 3 0 0 1 0 0.11 0.14 10 0 0 10 5 10 12 5 11 57.92 99.02 0.94 2 3 1 Whitelist BTCA-SG 0.54 0.33 0 0 0.48 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 4 91407944 157141523 1 2 142 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 5 3 3 57.92 0.22 99.77 0 2 0 Whitelist BTCA-SG 0.68 0.03 NA 0 0.64 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 5 1031683 3670005 3 11 142 1 0 1 1 8 0.8 0 15 0.01 0 15 3 3 23 8 9 57.92 3.17 96.71 3 1 8 Whitelist BTCA-SG 0.68 0 0.01 0 0.84 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 6 67710168 124238025 4 11 142 1 1 1 1 7 1 0 19 0 0 19 7 11 28 7 9 57.92 46.5 53.26 9 2 3 Whitelist BTCA-SG 0.74 0 0 0 1 1 High confidence BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA With other complex events 15 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 7 110763941 110782154 1 1 142 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 57.92 98.23 1.55 1 3 NA Whitelist BTCA-SG 0.62 0.13 NA NA 0.59 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 8 12726327 30583626 6 6 142 1 0 2 3 0 0.34 0.08 7 0 0 7 7 7 15 10 10 57.92 77.39 19.19 0 1 2 Whitelist BTCA-SG 0.62 0.23 0 0 0.59 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 9 579419 31993937 6 6 142 1 1 2 2 0 0.88 0.83 11 0 0 11 11 11 11 11 11 57.92 3.03 96.86 1 2 0 Whitelist BTCA-SG 0.93 0.97 0 0 0.91 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 10 NA NA 0 0 142 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.09 NA NA NA 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 11 NA NA 0 0 142 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 10 8 8 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.46 NA NA NA 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 12 15005593 128406118 3 11 142 0 0 2 1 8 0.3 0 18 0 0 18 7 18 21 7 7 57.92 70.11 26.21 3 3 4 Whitelist BTCA-SG 0.62 0.02 0 0 0.59 1 High confidence BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA With other complex events 14 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 13 20442386 73675913 1 6 142 4 0 0 0 2 0.01 0.49 10 0 0 10 4 8 16 5 12 57.92 68.55 28.68 0 2 1 Whitelist BTCA-SG 0.54 0.74 0 0 0.16 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 14 22429630 73744179 17 26 142 3 7 3 4 9 0.47 0 40 0 0 40 4 7 46 4 5 57.92 93.61 2.68 0 8 5 Whitelist BTCA-SG 0.82 0 0 0 0.64 1 Low confidence BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA With other complex events 43 0.15 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 15 95196114 95567145 1 1 142 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 57.92 0.36 99.47 0 1 2 Whitelist BTCA-SG 0.62 1 NA NA 0.59 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 16 59293803 59873481 1 1 142 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 57.92 99.31 0.64 0 2 4 Whitelist BTCA-SG 0.62 0.41 NA NA 0.59 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 17 18810759 50623292 1 2 142 2 0 0 0 0 0.11 0.6 4 NA 0 4 4 4 6 6 6 57.92 83.26 16.74 0 2 4 Whitelist BTCA-SG 0.54 0.81 NA 0 0.48 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 18 19366345 31021768 4 4 142 0 1 3 0 0 0.11 0.11 14 0 0 14 5 11 19 5 6 57.92 18.53 76.82 1 3 2 Whitelist BTCA-SG 0.54 0.28 0 0 0.48 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 19 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 20 NA NA 0 0 142 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.78 NA NA NA 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 21 23745607 32871589 1 2 142 2 0 0 0 0 0.11 0.25 4 NA 0 4 4 4 6 5 6 57.92 50 27.35 0 3 4 Whitelist BTCA-SG 0.54 0.49 NA 0 0.48 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 22 NA NA 0 0 142 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.89 NA NA NA 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_C080 X 31905917 95130075 1 2 142 2 0 0 0 0 0.11 0.33 7 0 0 7 3 5 10 3 5 57.92 56.47 43.3 4 3 1 Whitelist BTCA-SG 0.54 0.58 0 0 0.48 1 No BTCA-SG BTCA_donor_C080 BTCA 0.6 2.79 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 BTCA-SG DO218535 BTCA_donor_C080 female alive C22.1 69 1168 NA NA Included Biliary-AdenoCA BTCA SG 1 38.42 BTCA-SG::BTCA_donor_R149 1 1859098 239795623 1 9 108 3 3 2 1 0 0.75 0.86 23 0.01 0 23 9 11 28 9 9 67.46 98.14 1.86 6 3 4 Whitelist BTCA-SG 0.85 0.99 0.01 0 0.83 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 18 0.08 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 2 9279638 241055015 1 4 108 2 2 0 0 0 0.26 0.22 15 0 0 15 5 6 16 5 5 67.46 85.46 14.44 11 4 2 Whitelist BTCA-SG 0.62 0.45 0 0 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 3 12522223 145725800 1 3 108 1 2 0 0 0 0.3 0.09 11 0 0 11 3 9 13 4 4 67.46 53.01 43.84 2 1 4 Whitelist BTCA-SG 0.62 0.25 0 0 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 4 20123540 160291983 1 3 108 1 2 0 0 0 0.3 0.33 6 0 0 6 3 6 7 3 3 67.46 99.79 0 0 3 4 Whitelist BTCA-SG 0.62 0.58 0 0 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 5 12190219 43943339 3 3 108 0 1 2 0 0 0.3 0.11 14 0 0 14 5 11 26 6 13 67.46 23.65 73.69 0 4 3 Whitelist BTCA-SG 0.62 0.28 0 0 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 6 12567594 162907719 1 7 108 5 1 0 1 0 0.04 0.31 19 0 0 19 4 7 21 5 5 67.46 22.07 75.09 1 2 3 Whitelist BTCA-SG 0.47 0.55 0 0 0.38 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 7 5594318 133800776 1 4 108 1 1 0 0 2 0.57 0.67 4 0.4 0 4 3 4 7 3 3 67.46 99.78 0 9 4 3 Whitelist BTCA-SG 5 0.62 0.87 0.41 0 0.64 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 8 3862034 103805681 1 3 108 0 3 0 0 0 0.03 0.38 4 0.11 0 4 4 4 5 5 5 67.46 99.99 0 1 3 4 Whitelist BTCA-SG 0.41 0.63 0.11 0 0.33 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 9 21177307 34057855 1 2 108 1 1 0 0 0 0.57 0.62 2 0.02 0 NA NA NA 4 3 3 67.46 2.47 97.35 0 0 2 Whitelist BTCA-SG 0.68 0.83 0.02 0 0.64 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 10 NA NA 0 0 108 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 13 4 4 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.49 NA NA NA 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 11 123102265 123206114 1 1 108 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 67.46 99.57 0 2 4 5 Whitelist BTCA-SG 0.62 0.2 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 12 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 13 106528419 106574775 1 1 108 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 7 5 5 67.46 99.81 0.19 2 3 4 Whitelist BTCA-SG 0.62 0.41 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 14 22402704 54099947 29 29 108 5 5 10 9 0 0.41 0 47 0 0 47 4 5 47 4 4 67.46 8.23 90.86 4 20 2 Whitelist BTCA-SG 0.65 0 0 0 0.62 0 Low confidence BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA With other complex events 58 0.27 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 15 NA NA 0 0 108 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.93 NA NA NA 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 16 61499483 79214414 1 3 108 2 1 0 0 0 0.3 0.77 5 0 0 5 3 5 7 3 4 67.46 99.65 0.25 2 3 4 Whitelist BTCA-SG 0.62 0.93 0 0 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 17 14409828 15024918 1 1 108 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 6 3 3 67.46 68.98 26.57 0 0 2 Whitelist BTCA-SG 0.62 0.63 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 18 31619608 31647901 1 1 108 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 67.46 99.96 0 0 3 NA Whitelist BTCA-SG 0.62 0.63 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 19 18259141 19574578 1 1 108 0 0 0 1 0 0.39 0.73 2 NA NA NA NA NA 4 0 3 67.46 61.38 31.35 0 2 3 Whitelist BTCA-SG 0.62 0.9 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 20 14752056 15092575 1 2 108 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 7 3 3 67.46 99.03 0 0 5 1 Whitelist BTCA-SG 0.54 1 NA 0 0.48 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 21 30318309 30382405 1 1 108 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 67.46 0 77.35 1 2 NA Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 22 40775341 49635468 2 2 108 1 0 1 0 0 0.57 0.14 8 0 0 8 4 5 14 5 10 67.46 100 0 0 3 4 Whitelist BTCA-SG 0.68 0.33 0 0 0.64 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_R149 X 6934610 96844027 1 6 108 2 4 0 0 0 0.06 0.82 12 0 0 12 7 9 14 7 9 67.46 4.59 95.41 0 2 3 Whitelist BTCA-SG 0.54 0.96 0 0 0.48 0 No BTCA-SG BTCA_donor_R149 BTCA 0.34 3.04 Biliary-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7577085_T_C,CN:2 3 BTCA-SG DO218227 BTCA_donor_R149 male deceased C24.0 37 475 NA NA Included Biliary-AdenoCA BTCA SG 1 15.62 BTCA-SG::BTCA_donor_Y008 1 236895571 240157477 2 2 48 0 0 1 1 0 0.57 0.59 2 NA 0 NA NA NA NA NA NA 17.06 1.29 98.71 0 1 2 Whitelist BTCA-SG 0.68 0.81 NA 0 0.64 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 2 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 3 NA NA 0 0 48 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.93 NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 4 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 5 NA NA 0 0 48 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.62 NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 6 57495052 76025440 1 5 48 1 2 0 0 2 0.3 0.02 7 0 0 7 4 7 9 5 5 17.06 66.09 33.76 0 2 1 Whitelist BTCA-SG 0.62 0.09 0 0 0.59 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 8 0.08 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 7 NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.76 NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 8 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 9 88648110 88770562 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 17.06 47.36 51.94 0 2 3 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 10 34569395 34770899 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 17.06 21.39 78.43 0 1 2 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 12 26229373 30367890 3 3 48 1 0 1 1 0 0.8 0 8 0 0 8 5 5 15 6 6 17.06 4.65 95.27 1 3 2 Whitelist BTCA-SG 0.87 0 0 0 0.84 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 13 NA NA 0 0 48 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.88 NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 15 22788956 26141943 1 1 48 0 0 0 1 0 0.39 0.15 4 NA NA 4 3 4 11 3 4 17.06 4.32 90.9 0 2 16 Whitelist BTCA-SG 0.62 0.35 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 17 10977119 11612364 1 2 48 1 0 1 0 0 0.57 0.14 2 0 0 NA NA NA 8 5 5 17.06 23.75 71.8 0 1 2 Whitelist BTCA-SG 0.68 0.34 0 0 0.64 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 18 48599903 48649162 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.06 99.96 0 0 0 1 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 19 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 22 21053371 41089205 9 9 48 3 1 2 3 0 0.75 0 12 0 0 12 4 11 20 4 11 17.06 55.89 31.52 0 2 1 Whitelist BTCA-SG 0.85 0 0 0 0.83 0 Low confidence BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA With other complex events 18 0.19 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y008 X NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y008 BTCA 0.48 1.88 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:1 2 BTCA-SG DO217850 BTCA_donor_Y008 female deceased C22.1 65 176 NA NA Included Biliary-AdenoCA BTCA SG 1 5.79 BTCA-SG::BTCA_donor_Y065 1 3546549 210602018 1 2 26 2 0 0 0 0 0.11 0.45 4 0 0 4 4 4 5 5 5 20.69 12.23 87.76 3 1 2 Whitelist BTCA-SG 0.54 0.7 0 0 0.48 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 2 197760340 198178758 1 1 26 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 20.69 0 99.91 0 2 NA Whitelist BTCA-SG 0.62 0.9 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 3 152509318 153321343 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 20.69 0.41 99.54 1 1 2 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 5 24731128 110621548 1 2 26 2 0 0 0 0 0.11 0.22 4 NA 0 4 4 4 7 7 7 20.69 1.4 98.46 0 1 2 Whitelist BTCA-SG 0.54 0.45 NA 0 0.48 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 6 6739876 10054181 2 2 26 0 0 1 1 0 0.57 0.2 4 NA 0 4 4 4 7 7 7 20.69 1.61 98.21 0 1 2 Whitelist BTCA-SG 0.68 0.43 NA 0 0.64 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 7 143611881 146038785 1 2 26 2 0 0 0 0 0.11 0.16 1 0 0 NA NA NA NA NA NA 20.69 0 99.77 1 2 NA Whitelist BTCA-SG 0.54 0.37 0 0 0.48 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 8 85623496 85741457 1 1 26 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA 5 3 3 20.69 70.86 29.13 0 3 NA Whitelist BTCA-SG 0.62 0.63 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 9 21545921 105068227 1 2 26 1 1 0 0 0 0.57 0.27 2 NA 0 NA NA NA NA NA NA 20.69 99.86 0 0 0 1 Whitelist BTCA-SG 0.68 0.51 NA 0 0.64 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 10 81084195 107806923 1 2 26 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 20.69 0.09 99.73 0 1 2 Whitelist BTCA-SG 0.54 0.59 NA 0 0.48 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 11 22947999 23011644 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 20.69 0.05 99.52 0 1 2 Whitelist BTCA-SG 0.62 1 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 12 11521337 55645508 1 3 26 3 0 0 0 0 0.03 0.12 6 0 0 6 3 6 7 4 4 20.69 20.35 79.57 0 1 2 Whitelist BTCA-SG 0.41 0.31 0 0 0.33 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 6 0.12 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 16 78633149 78653441 1 1 26 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA 5 5 5 20.69 0.17 99.72 5 1 2 Whitelist BTCA-SG 0.62 0.75 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 20 14984203 15408736 1 2 26 2 0 0 0 0 0.11 0.11 2 NA 0 NA NA NA NA NA NA 20.69 0.67 98.33 0 1 2 Whitelist BTCA-SG 0.54 0.28 NA 0 0.48 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y065 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y065 BTCA 0.57 1.85 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO217864 BTCA_donor_Y065 male deceased C22.1 63 558 NA NA Included Biliary-AdenoCA BTCA SG 1 18.36 BTCA-SG::BTCA_donor_Y140 1 107584752 202068009 1 2 96 0 0 1 1 0 0.57 0.7 5 0 0 5 3 5 11 5 7 89.28 86.43 10.23 0 4 5 Whitelist BTCA-SG 0.68 0.9 0 0 0.64 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 4 0.02 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 2 234874067 235738429 1 1 96 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 89.28 99.91 0 0 3 4 Whitelist BTCA-SG 0.62 0.03 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 3 60748659 169467805 1 3 96 1 2 0 0 0 0.3 1 7 0 0 7 3 4 8 3 5 89.28 76.52 20.33 0 2 3 Whitelist BTCA-SG 0.62 1 0 0 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 6 0.03 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 4 173053174 173080192 1 1 96 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 89.28 99.9 0 1 4 NA Whitelist BTCA-SG 0.62 0.09 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 5 15376816 147642821 1 3 96 1 1 0 0 1 0.57 0.29 3 NA 0 NA NA NA 6 5 6 89.28 71.2 26.14 3 2 3 Whitelist BTCA-SG 0.62 0.53 NA 0 0.64 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 5 0.03 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 6 NA NA 0 0 96 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.32 NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 7 54973065 55220014 1 3 96 0 0 1 2 0 0.3 0 2 0 0 NA NA NA 12 3 3 89.28 99.78 0 14 49 452 Whitelist BTCA-SG 0.62 0 0 0 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 6 0.03 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 8 NA NA 0 0 96 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 12 4 4 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.36 0 NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 9 16734961 16753132 1 1 96 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 7 4 4 89.28 83.16 14.3 0 1 2 Whitelist BTCA-SG 0.62 0.81 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 10 116032677 116104287 1 1 96 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 89.28 99.82 0 0 4 NA Whitelist BTCA-SG 0.62 0.33 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 11 128469165 128529108 1 1 96 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 89.28 99.44 0 0 4 NA Whitelist BTCA-SG 0.62 0.58 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 12 NA NA 0 0 96 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.84 NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 13 NA NA 0 0 96 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.93 NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 14 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 15 81824776 81835615 1 1 96 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 89.28 99.87 0 0 5 NA Whitelist BTCA-SG 0.62 0.76 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 16 NA NA 0 0 96 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.76 NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 17 608922 43146006 2 8 96 0 0 2 0 6 0.11 0 15 0 0 15 3 5 19 6 6 89.28 71.32 24.24 0 2 3 Whitelist BTCA-SG 19 0.62 0 0 0 0.48 0 Linked to low confidence BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA With other complex events 10 0.05 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 18 23113326 23148872 1 1 96 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 7 4 4 89.28 95.35 0 0 4 5 Whitelist BTCA-SG 0.62 0.76 NA NA 0.59 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 2 0.01 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 19 29068313 56261033 19 21 96 4 1 10 4 2 0.03 0 45 0 0 45 6 7 50 6 11 89.28 76.1 23.73 2 3 5 Whitelist BTCA-SG 0.58 0 0 0 0.33 0 Low confidence BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA With other complex events 40 0.21 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Y140 X NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Y140 BTCA 0.78 3.66 Biliary-AdenoCA NA 0 0 NA 3 BTCA-SG DO218411 BTCA_donor_Y140 female alive C22.1 56 2100 NA NA Included Biliary-AdenoCA BTCA SG 1 69.08 BTCA-SG::BTCA_donor_Z2403 1 152357599 167708812 1 2 17 2 0 0 0 0 0.11 0.04 5 0 0 5 3 5 11 4 5 25.98 8.86 91.14 0 4 2 Whitelist BTCA-SG 0.54 0.14 0 0 0.48 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 4 0.12 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 2 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 1 NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 9 90780892 130857412 1 3 17 1 0 1 1 0 0.8 0.03 9 0 0 9 6 9 9 6 9 25.98 15.84 83.45 0 1 2 Whitelist BTCA-SG 0.87 0.1 0 0 0.84 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 6 0.18 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 10 56374142 67038412 1 1 17 0 0 1 0 0 0.39 0 6 0 0 6 0 3 6 0 3 25.98 0.8 99.02 0 2 6 Whitelist BTCA-SG 0.62 0.01 0 0 0.59 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 2 0.06 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 11 NA NA 0 0 17 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.41 NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 17 7567674 7582011 1 1 17 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 25.98 26.47 68.22 0 0 1 Whitelist BTCA-SG 0.62 0.62 NA NA 0.59 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 2 0.06 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA NA NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 BTCA-SG::BTCA_donor_Z2403 X NA NA 0 0 17 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist BTCA-SG NA 0.81 NA NA NA 0 No BTCA-SG BTCA_donor_Z2403 BTCA 0.48 1.82 Biliary-AdenoCA NA 0 0 NA 2 BTCA-SG DO218491 BTCA_donor_Z2403 female deceased C22.1 76 445 NA NA Included Biliary-AdenoCA BTCA SG 1 14.64 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 1 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 2 NA NA 0 0 47 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.95 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 3 168725045 172192478 9 9 47 1 1 1 6 0 0.04 0 12 0 0 12 3 3 37 4 5 15 51.51 48.38 4 49 35 Whitelist CESC-US 0.48 0 0 0 0.4 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 18 0.19 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 4 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 5 NA NA 0 0 47 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.62 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 6 NA NA 0 0 47 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.76 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 7 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 8 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 9 9307468 9410270 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 3 15 0.14 99.71 0 1 4 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 10 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 11 13242825 87334063 1 3 47 2 0 0 0 1 0.11 0 6 0 0 6 3 6 10 4 4 15 42.11 57.74 0 1 2 Whitelist CESC-US 0.62 0 0 0 0.48 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 5 0.05 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 12 NA NA 0 0 47 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.9 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 13 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 14 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 15 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 17 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 13 4 6 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 19 NA NA 0 0 47 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.06 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 20 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 22 NA NA 0 0 47 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.68 NA NA NA 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 0 0 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00ad0ffe-2105-4829-a495-1c2aceb5bb31 X 141507113 142840111 5 5 47 3 1 1 0 0 0.28 0 5 0 0 5 0 4 8 4 5 15 60.53 36.08 1 2 3 Whitelist CESC-US 0.62 0.01 0 0 0.59 0 No CESC-US 00ad0ffe-2105-4829-a495-1c2aceb5bb31 CESC 0.79 2.21 Cervix-SCC NA 10 0.11 NA 2 CESC-US DO51600 TCGA-EK-A2R9 00ad0ffe-2105-4829-a495-1c2aceb5bb31 female alive C53.9 58 NA 4 NA Included Cervix-SCC CESC US 0 0.13 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 1 NA NA 0 0 168 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.35 0 NA NA 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 0 0 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 2 58323197 219905903 1 6 168 4 0 1 1 0 0.11 1 13 0 0 13 9 13 13 9 9 61.77 99.9 0 5 3 1 Whitelist CESC-US 0.54 1 0 0 0.48 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 12 0.04 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 3 86145642 142669315 1 5 168 1 0 0 1 3 0.57 0.88 5 0 0 5 5 5 9 6 6 61.77 67.26 29.59 2 4 3 Whitelist CESC-US 0.68 1 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 7 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 4 35008787 35041623 2 2 168 1 1 0 0 0 0.57 0.22 2 0 0 NA NA NA 7 3 3 61.77 0.03 99.76 0 2 3 Whitelist CESC-US 0.68 0.45 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 5 9908959 160950643 1 4 168 2 0 1 1 0 0.57 0.2 4 0 0 4 4 4 5 5 5 61.77 99.86 0.02 7 2 3 Whitelist CESC-US 0.68 0.42 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 8 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 6 41153715 132249042 1 5 168 1 2 0 0 2 0.3 0.42 11 0 0 11 5 11 12 5 12 61.77 33.09 64.08 0 2 3 Whitelist CESC-US 0.68 0.66 0 0 0.59 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 8 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 7 53273713 53296132 2 2 168 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 10 0 3 61.77 55.71 44.07 0 3 NA Whitelist CESC-US 0.68 0.06 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 8 6498862 124753660 1 4 168 3 0 0 0 1 0.03 0.86 7 0 0 7 3 4 8 3 3 61.77 67.5 28.44 5 2 4 Whitelist CESC-US 0.54 0.99 0 0 0.33 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 7 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 9 3940656 128687440 1 3 168 3 0 0 0 0 0.03 0.69 8 0 0 8 5 8 9 5 9 61.77 99.63 0.26 0 4 2 Whitelist CESC-US 0.41 0.89 0 0 0.33 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 6 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 10 24488550 113543469 1 2 168 2 0 0 0 0 0.11 0.2 3 0 0 NA NA NA 4 3 3 61.77 27.97 68.68 0 0 1 Whitelist CESC-US 0.54 0.42 0 0 0.48 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 11 8330694 102109565 1 8 168 1 1 1 1 4 1 0 10 0 0 10 4 5 12 5 5 61.77 34.44 61.49 1 1 2 Whitelist CESC-US 2 0.68 0.01 0 0 1 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 12 0.04 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 12 47208673 56550744 7 7 168 1 3 0 3 0 0.28 0.02 6 0 0 6 4 6 8 4 4 61.77 61.85 38 0 3 2 Whitelist CESC-US 0.62 0.07 0 0 0.59 0 Low confidence CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC Canonical without polyploidization 14 0.04 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 13 72293343 72342591 1 1 168 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 4 4 4 61.77 42.01 57.99 0 2 3 Whitelist CESC-US 0.62 0.97 0 NA 0.59 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 2 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 14 44384753 87991133 1 2 168 2 0 0 0 0 0.11 0.82 3 0 0 NA NA NA 4 3 4 61.77 96.29 0 0 4 3 Whitelist CESC-US 0.54 0.96 0 0 0.48 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 15 31879151 51329491 1 2 168 2 0 0 0 0 0.11 0.05 3 0 0 NA NA NA 9 3 3 61.77 49.32 50.68 0 1 2 Whitelist CESC-US 0.54 0.17 0 0 0.48 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 16 20201784 73447598 1 3 168 0 0 2 1 0 0.3 0.09 4 0 0 4 4 4 6 6 6 61.77 66.66 33.03 2 2 3 Whitelist CESC-US 0.62 0.26 0 0 0.59 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 6 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 17 33148 57241551 1 5 168 1 0 1 0 3 0.57 0.14 4 0 0 4 3 4 6 3 3 61.77 78.39 21.61 0 3 2 Whitelist CESC-US 0.62 0.34 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 7 0.02 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 18 NA NA 0 0 168 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.59 NA NA NA 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 0 0 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 19 1125192 51017026 1 6 168 1 0 3 2 0 0.34 0 2 0 0 NA NA NA NA NA NA 61.77 99.71 0.12 1 2 3 Whitelist CESC-US 0.62 0.01 0 0 0.59 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 12 0.04 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 20 8987726 9004735 2 2 168 0 0 1 1 0 0.57 0.42 1 0 0 NA NA NA NA NA NA 61.77 81.72 10.59 0 4 NA Whitelist CESC-US 0.68 0.67 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 21 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 0 0 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 22 36718938 38011373 1 2 168 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 61.77 99.88 0.12 0 3 2 Whitelist CESC-US 0.68 0.02 0 0 0.64 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 4 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::00bca18c-b3d4-45a3-8f19-034cc40449a4 X 108417925 145165287 1 3 168 2 0 0 0 1 0.11 1 5 0 0 5 3 4 11 5 6 61.77 84.86 11.75 2 2 4 Whitelist CESC-US 0.41 1 0 0 0.48 0 No CESC-US 00bca18c-b3d4-45a3-8f19-034cc40449a4 CESC 0.76 2.78 Cervix-SCC NA 5 0.01 NA 3 CESC-US DO48987 TCGA-C5-A2LV 00bca18c-b3d4-45a3-8f19-034cc40449a4 female alive C53.9 36 NA 2234 NA Included Cervix-SCC CESC US 0 73.49 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 1 57930781 58310640 4 17 43 3 0 0 1 13 0.11 0 6 0 0 6 5 6 8 5 8 67.73 100 0 0 3 4 Whitelist CESC-US 0.77 0 0 0 0.48 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 21 0.24 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 2 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 3 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 4 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 5 58398006 93625940 1 2 43 1 0 1 0 0 0.57 0.75 2 0.01 0 NA NA NA 5 3 3 67.73 97.27 0.06 1 2 3 Whitelist CESC-US 0.68 0.92 0.01 0 0.64 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 4 0.05 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 8 114150369 114319875 1 5 43 0 0 1 0 4 0.39 0 2 0 0 NA NA NA NA NA NA 67.73 99.99 0 0 3 4 Whitelist CESC-US 1 0.68 0 0 0 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 6 0.07 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 9 131640537 131670529 1 1 43 0 0 1 0 0 0.39 0.69 1 NA NA NA NA NA NA NA NA 67.73 99.89 0 0 4 NA Whitelist CESC-US 0.62 0.89 NA NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 10 106886639 124385222 1 2 43 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 67.73 99.7 0.11 0 3 2 Whitelist CESC-US 0.68 1 NA 0 0.64 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 4 0.05 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 11 94301468 101672196 1 1 43 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA NA NA NA 67.73 94.11 5.46 0 2 3 Whitelist CESC-US 0.62 0.7 0 NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 12 65284212 65310059 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 67.73 99.9 0.02 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 15 83826887 83875387 1 1 43 0 1 0 0 0 0.39 0.12 1 0 NA NA NA NA 5 5 5 67.73 92.38 2.85 0 3 NA Whitelist CESC-US 0.62 0.3 0 NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 17 5412842 63127819 1 4 43 1 1 1 1 0 1 0.03 4 0 0 4 3 4 5 3 3 67.73 99.72 0.27 0 3 2 Whitelist CESC-US 1 0.11 0 0 1 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 8 0.09 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 18 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 19 52072319 52093715 1 1 43 1 0 0 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 67.73 51.63 41.09 0 6 NA Whitelist CESC-US 0.62 0.8 NA NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 21 42751433 42805680 1 1 43 0 1 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 67.73 0.11 77.24 0 2 4 Whitelist CESC-US 0.62 0.66 NA NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 0 0 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::0809ba8b-4ab6-4f43-934c-c1ccbc014a7e X 146284045 146294250 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 67.73 0 99.78 0 2 NA Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e CESC 0.51 3.04 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO48977 TCGA-EK-A2PK 0809ba8b-4ab6-4f43-934c-c1ccbc014a7e female alive C53.9 43 NA 0 NA Included Cervix-SCC CESC US 0 0 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 1 187536266 192084672 1 2 48 2 0 0 0 0 0.11 0.59 4 NA 0 4 4 4 5 5 5 32.11 0.54 99.46 0 1 2 Whitelist CESC-US 0.54 0.81 NA 0 0.48 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 2 111667246 188130487 1 2 48 2 0 0 0 0 0.11 0.43 4 NA 0 4 4 4 6 5 5 32.11 60.11 37.2 0 0 1 Whitelist CESC-US 0.54 0.68 NA 0 0.48 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 3 52317035 52448396 1 1 48 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 32.11 85.09 14.77 0 1 NA Whitelist CESC-US 0.62 0.93 NA NA 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 4 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 5 22568447 117217996 1 4 48 2 0 0 0 2 0.11 0.54 4 0 0 4 4 4 5 5 5 32.11 36.42 60.48 2 1 2 Whitelist CESC-US 0.54 0.77 0 0 0.48 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 6 0.06 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 6 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 7 3517193 7104445 2 2 48 2 0 0 0 0 0.11 0.33 4 0.62 0 4 3 4 7 4 4 32.11 4.77 95 0 1 0 Whitelist CESC-US 0.54 0.58 0.62 0 0.48 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 8 100852907 139135251 1 2 48 1 1 0 0 0 0.57 0.1 3 0 0 NA NA NA 5 3 3 32.11 28.96 71.03 0 2 1 Whitelist CESC-US 0.68 0.26 0 0 0.64 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 9 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 10 NA NA 0 0 48 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CESC-US NA 0.53 NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 11 27147340 67387943 1 8 48 4 1 1 0 2 0.11 0 13 0 0 13 6 10 15 6 10 32.11 94.57 1.62 0 1 3 Whitelist CESC-US 0.62 0 0 0 0.48 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 14 0.15 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 12 25270241 34010835 1 3 48 2 1 0 0 0 0.3 0 7 0 0 7 7 7 12 11 12 32.11 24.17 72.05 0 2 1 Whitelist CESC-US 0.62 0 0 0 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 6 0.06 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 13 100109667 104603074 1 1 48 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 32.11 3.9 96.1 0 1 2 Whitelist CESC-US 0.62 0.46 NA NA 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 15 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 16 51534268 52335395 1 1 48 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 32.11 0.89 99.07 0 1 2 Whitelist CESC-US 0.62 0.14 NA NA 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 17 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 18 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 19 NA NA 0 0 48 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.48 NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 20 21385701 22150238 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.11 1.21 98.47 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 21 43068745 43224144 2 2 48 0 0 1 1 0 0.57 0.02 6 0 0 6 3 6 7 4 4 32.11 0.28 77.08 0 1 2 Whitelist CESC-US 0.68 0.08 0 0 0.64 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 22 NA NA 0 0 48 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.69 NA NA NA 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 0 0 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::110cd100-5730-4873-9fab-2ae6c8732062 X 126997704 128267338 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.11 99.77 0 0 0 1 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 110cd100-5730-4873-9fab-2ae6c8732062 CESC 0.94 1.74 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO48993 TCGA-C5-A1M8 110cd100-5730-4873-9fab-2ae6c8732062 female alive C53.9 43 NA 919 NA Included Cervix-SCC CESC US 0 30.23 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 1 NA NA 0 0 43 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.63 NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 2 NA NA 0 0 43 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.94 NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 3 NA NA 0 0 43 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.02 0 NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 4 91693709 91866131 1 1 43 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 32.64 99.98 0 0 0 1 Whitelist CESC-US 0.62 0.62 NA NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 5 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 6 41334903 41427750 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 32.64 21.48 78.37 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 7 78378633 78551165 1 1 43 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 32.64 97.29 0 0 0 1 Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 8 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 9 97599881 97637550 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.64 0.03 99.27 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 11 103777705 104411437 3 3 43 1 0 1 1 0 0.8 0 6 0 0 6 4 5 29 6 6 32.64 49.06 50.51 1 28 48 Whitelist CESC-US 0.87 0 0 0 0.84 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 6 0.07 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 13 NA NA 0 0 43 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.07 0 NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 17 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 18 59498453 59549270 1 1 43 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 32.64 0.07 99.9 0 1 2 Whitelist CESC-US 0.62 0.03 0 NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 19 31629353 31725630 1 1 43 0 0 0 1 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 32.64 46.51 53.32 0 3 4 Whitelist CESC-US 0.62 0.8 NA NA 0.59 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::14c65927-b9dd-4ef6-9917-db7bc431ff2f X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 14c65927-b9dd-4ef6-9917-db7bc431ff2f CESC 0.89 1.87 Cervix-SCC NA 0 0 NA 2 CESC-US DO44285 TCGA-C5-A0TN 14c65927-b9dd-4ef6-9917-db7bc431ff2f female deceased C53.9 21 348 NA NA Included Cervix-SCC CESC US 1 11.45 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 1 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.9 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 2 141744894 141862708 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 16.35 18.75 81.14 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 2 0.04 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 3 41251176 143986405 1 2 28 2 0 0 0 0 0.11 1 5 NA 0 5 4 5 6 4 4 16.35 43.86 56.09 0 1 2 Whitelist CESC-US 0.54 1 NA 0 0.48 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 4 0.07 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 4 145440804 145968553 1 2 28 1 0 0 1 0 0.57 0.43 2 NA 0 NA NA NA NA NA NA 16.35 0.28 99.51 2 1 2 Whitelist CESC-US 0.68 0.68 NA 0 0.64 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 4 0.07 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 5 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 6 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 7 88477317 88541886 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 16.35 0 99.77 0 2 NA Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 2 0.04 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 8 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 11 68472689 70337421 2 2 28 0 0 1 1 0 0.57 0.01 4 0 0 4 3 4 10 4 4 16.35 58.8 40.77 4 1 2 Whitelist CESC-US 0.68 0.04 0 0 0.64 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 4 0.07 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 17 6635580 52552822 1 2 28 1 1 0 0 0 0.57 0.17 2 NA 0 NA NA NA NA NA NA 16.35 17.1 82.89 1 1 2 Whitelist CESC-US 0.68 0.39 NA 0 0.64 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 4 0.07 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 19 9062361 15215998 1 3 28 0 0 2 0 1 0.11 0 4 0 0 4 0 3 9 4 5 16.35 58.12 41.7 0 2 3 Whitelist CESC-US 0.62 0 0 0 0.48 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 5 0.09 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 21 NA NA 0 0 28 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.54 NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 22 NA NA 0 0 28 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist CESC-US NA 0.02 0 NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::262311a0-7a10-4934-8fba-11ee581ad738 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 262311a0-7a10-4934-8fba-11ee581ad738 CESC 0.74 1.96 Cervix-SCC NA 0 0 NA 2 CESC-US DO48991 TCGA-C5-A1BF 262311a0-7a10-4934-8fba-11ee581ad738 female deceased C53.9 46 570 NA NA Included Cervix-SCC CESC US 1 18.75 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 3 175097576 184297636 1 3 22 1 1 0 0 1 0.57 0 5 0 0 5 3 5 14 3 4 86 57.42 42.44 0 36 12 Whitelist CESC-US 0.87 0 0 0 0.64 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 5 0.11 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 4 182127873 183358488 1 2 22 2 0 0 0 0 0.11 0.66 3 NA 0 NA NA NA NA NA NA 86 99.75 0.07 0 3 2 Whitelist CESC-US 0.54 0.86 NA 0 0.48 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 4 0.09 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 5 NA NA 0 0 22 0 0 0 0 0 NA 0.05 NA 0.03 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.15 0.03 NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 7 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 10 43038833 43063327 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86 0.02 99.77 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 2 0.05 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 12 61499383 61868587 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86 99.64 0.28 0 2 4 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 2 0.05 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 14 NA NA 0 0 22 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.75 NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 16 48853599 48866883 1 1 22 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 86 99.89 0 0 3 5 Whitelist CESC-US 0.62 0.69 NA NA 0.59 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 2 0.05 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 19 NA NA 0 0 22 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.61 NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 20 14790664 14811855 1 1 22 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 86 99.02 0 0 4 NA Whitelist CESC-US 0.62 0.63 NA NA 0.59 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 2 0.05 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 0 0 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::374f614a-bcd1-4283-ac6f-fc27ddc79987 X 149511168 149596853 1 4 22 0 3 0 1 0 0.11 0.02 6 0 0 6 0 3 6 0 3 86 99.78 0 4 4 6 Whitelist CESC-US 0.54 0.09 0 0 0.48 0 No CESC-US 374f614a-bcd1-4283-ac6f-fc27ddc79987 CESC 0.79 4.04 Cervix-SCC NA 8 0.18 NA 4 CESC-US DO51592 TCGA-C5-A1ML 374f614a-bcd1-4283-ac6f-fc27ddc79987 female deceased C53.9 49 636 NA NA Included Cervix-SCC CESC US 1 20.92 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 1 39457984 210227573 1 3 36 2 1 0 0 0 0.3 0.53 7 0 0 7 7 7 8 8 8 12.7 30.63 69.37 0 3 2 Whitelist CESC-US 0.62 0.76 0 0 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 6 0.08 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 2 226149488 228277377 1 1 36 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 12.7 0.87 99.01 0 1 2 Whitelist CESC-US 0.62 0.62 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 3 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.76 NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 4 74543526 97085547 1 3 36 2 1 0 0 0 0.3 0.3 2 0 0 NA NA NA NA NA NA 12.7 0.03 99.87 0 2 4 Whitelist CESC-US 0.62 0.55 0 0 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 6 0.08 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 5 12279079 12339705 1 1 36 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 12.7 0 99.88 0 2 NA Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 6 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 7 63807689 63891784 2 2 36 0 0 1 1 0 0.57 0.72 4 NA 0 4 4 4 5 5 5 12.7 0.04 99.75 4 1 2 Whitelist CESC-US 0.68 0.9 NA 0 0.64 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 4 0.06 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 8 23754676 23768165 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.7 0.01 99.98 0 2 4 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 10 85766537 115685845 1 2 36 2 0 0 0 0 0.11 0.68 4 NA 0 4 3 4 5 3 3 12.7 22.08 77.75 0 1 0 Whitelist CESC-US 0.54 0.88 NA 0 0.48 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 4 0.06 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 11 34510569 109595467 1 6 36 3 1 1 0 1 0.28 0.01 7 0 0 7 6 7 8 6 6 12.7 34.15 62.38 0 1 2 Whitelist CESC-US 0.68 0.03 0 0 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 11 0.15 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 12 11851533 26468325 1 3 36 3 0 0 0 0 0.03 0.09 6 0 0 6 6 6 7 7 7 12.7 3.71 96.21 3 1 2 Whitelist CESC-US 0.41 0.24 0 0 0.33 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 6 0.08 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 13 25399872 74197900 1 5 36 1 2 1 0 1 0.57 0.01 10 0 0 10 8 10 11 9 9 12.7 1.24 98.76 0 2 1 Whitelist CESC-US 0.93 0.04 0 0 0.64 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 9 0.12 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 15 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 17 57846710 57937769 2 2 36 0 0 1 1 0 0.57 0.25 2 NA 0 NA NA NA NA NA NA 12.7 0.05 99.93 0 2 3 Whitelist CESC-US 0.68 0.5 NA 0 0.64 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 4 0.06 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 18 46981841 61689296 1 1 36 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA 4 4 4 12.7 22.67 77.3 0 1 2 Whitelist CESC-US 0.62 0.84 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 19 42220777 42234737 1 1 36 0 1 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 12.7 0 99.83 0 2 NA Whitelist CESC-US 0.62 0.36 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 20 42705272 42961389 1 1 36 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA 5 3 3 12.7 1.08 97.95 0 2 3 Whitelist CESC-US 0.62 0.77 NA NA 0.59 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 2 0.03 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::61eb08d0-ea01-45e7-884b-ac3d6070172a X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 61eb08d0-ea01-45e7-884b-ac3d6070172a CESC 0.92 2.07 Cervix-AdenoCA NA 0 0 NA 2 CESC-US DO49954 TCGA-EK-A2RL 61eb08d0-ea01-45e7-884b-ac3d6070172a female alive C53.9 32 NA 721 NA Included Cervix-AdenoCA CESC US 0 23.72 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 1 1608960 1627715 1 1 29 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 36.83 0 100 0 2 NA Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 2 0.03 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 2 NA NA 0 0 29 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.75 NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 3 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA 34 5 5 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 5 NA NA 0 0 29 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 18 5 7 0 0 0 0 0 0 Whitelist CESC-US NA 0 0 NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 7 126183385 127280513 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 36.83 99.74 0 0 0 1 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 2 0.03 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 8 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 10 89381860 89993634 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 36.83 99.79 0 0 0 1 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 2 0.03 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 11 NA NA 0 0 29 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.64 NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 12 NA NA 0 0 29 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 9 3 4 0 0 0 0 0 0 Whitelist CESC-US NA 0.05 0 NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 16 NA NA 0 0 29 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.04 0 NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 19 NA NA 0 0 29 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.69 NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::6b74c07a-9932-4a80-8296-9db08d0c6964 X NA NA 0 0 29 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.4 0 NA NA 0 No CESC-US 6b74c07a-9932-4a80-8296-9db08d0c6964 CESC 0.76 1.76 Cervix-SCC NA 0 0 NA 2 CESC-US DO6255 TCGA-EX-A1H5 6b74c07a-9932-4a80-8296-9db08d0c6964 female alive C53.9 58 NA 178 NA Included Cervix-SCC CESC US 0 5.86 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 1 32484937 169301642 1 3 56 1 0 1 1 0 0.8 0.21 5 0 0 5 0 3 7 0 3 22.31 15.2 84.79 14 2 3 Whitelist CESC-US 0.87 0.43 0 0 0.84 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 6 0.05 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 2 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 3 88883690 89900644 1 1 56 0 0 0 1 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 22.31 70.62 26.21 0 1 3 Whitelist CESC-US 0.62 0.4 NA NA 0.59 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 4 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 5 NA NA 0 0 56 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.51 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 6 NA NA 0 0 56 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.93 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 7 55513308 68283468 1 2 56 2 0 0 0 0 0.11 0.12 2 0 0 NA NA NA NA NA NA 22.31 0.07 99.71 0 1 2 Whitelist CESC-US 0.54 0.31 0 0 0.48 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 8 77884007 78217734 1 1 56 1 0 0 0 0 0.39 0.53 2 0 NA NA NA NA NA NA NA 22.31 0.23 99.77 0 1 2 Whitelist CESC-US 0.62 0.76 0 NA 0.59 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 9 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 10 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 11 103165308 103358709 2 4 56 1 1 1 1 0 1 0 6 0 0 6 4 4 13 4 4 22.31 53.2 46.38 1 10 16 Whitelist CESC-US 1 0 0 0 1 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 8 0.07 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 12 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 13 NA NA 0 0 56 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.9 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 14 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 15 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 16 79020048 79081770 1 1 56 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.31 0.07 99.84 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 17 57745486 57884430 1 1 56 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA 6 3 3 22.31 32.26 62.49 0 2 NA Whitelist CESC-US 0.62 0.07 0 NA 0.59 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 18 NA NA 0 0 56 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist CESC-US NA 0.19 NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 19 39183873 39269484 1 1 56 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 7 0 0 22.31 11.88 87.95 0 20 NA Whitelist CESC-US 0.62 0.03 0 NA 0.59 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 20 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 0 0 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7941d1c7-5319-4e8d-a15f-60b61cb68a9b X 93428695 151279775 1 2 56 1 1 0 0 0 0.57 0.06 7 0 0 7 6 7 7 6 6 22.31 21.72 78.06 5 2 3 Whitelist CESC-US 0.68 0.19 0 0 0.64 0 No CESC-US 7941d1c7-5319-4e8d-a15f-60b61cb68a9b CESC 0.4 1.98 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO49009 TCGA-C5-A1BJ 7941d1c7-5319-4e8d-a15f-60b61cb68a9b female alive C53.9 34 NA 4385 NA Included Cervix-SCC CESC US 0 144.24 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 1 10681186 74317452 1 4 138 1 1 0 0 2 0.57 0.43 3 0 0 NA NA NA 5 5 5 48.97 20.69 79.31 1 2 1 Whitelist CESC-US 0.68 0.68 0 0 0.64 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 6 0.02 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 2 34859509 184526022 1 4 138 0 4 0 0 0 0.01 0.22 2 0 0 NA NA NA NA NA NA 48.97 0.21 99.7 3 2 3 Whitelist CESC-US 0.21 0.45 0 0 0.16 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 8 0.03 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 3 6659608 176576257 1 6 138 2 3 0 0 1 0.14 0.62 7 0 0 7 5 7 7 5 5 48.97 91.47 5.39 3 3 4 Whitelist CESC-US 0.62 0.83 0 0 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 11 0.04 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 4 187152295 187625859 1 2 138 2 0 0 0 0 0.11 0.03 4 0 0 4 4 4 5 5 5 48.97 99.98 0 0 0 1 Whitelist CESC-US 0.54 0.1 0 0 0.48 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 4 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 5 65360014 171550228 2 2 138 1 1 0 0 0 0.57 0.48 8 0 0 8 5 8 12 7 10 48.97 16.3 83.56 6 2 1 Whitelist CESC-US 0.68 0.72 0 0 0.64 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 4 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 6 46659231 58507397 16 16 138 3 6 1 6 0 0.21 0 16 0 0 16 10 16 49 11 11 48.97 73.82 23.24 0 2 1 Whitelist CESC-US 0.62 0 0 0 0.59 1 High confidence CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC Canonical without polyploidization 32 0.12 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 7 116989539 157673959 1 2 138 1 1 0 0 0 0.57 0.13 2 0 0 NA NA NA 4 4 4 48.97 10.8 88.97 0 1 2 Whitelist CESC-US 0.68 0.32 0 0 0.64 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 4 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 8 14571367 92705189 1 4 138 2 1 0 0 1 0.3 0.85 3 0 0 NA NA NA 4 4 4 48.97 38.25 61.75 4 2 1 Whitelist CESC-US 0.54 0.98 0 0 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 7 0.03 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 9 107037625 122052417 1 1 138 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 48.97 99.33 0 0 1 NA Whitelist CESC-US 0.62 0.16 NA NA 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 2 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 10 30746169 130622377 4 6 138 1 1 1 1 2 1 0.42 9 0 0 9 5 9 11 5 5 48.97 75.24 21.26 7 1 2 Whitelist CESC-US 0.68 0.67 0 0 1 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 10 0.04 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 11 103638244 134049811 1 2 138 2 0 0 0 0 0.11 0.42 3 0 0 NA NA NA 7 7 7 48.97 9.25 90.32 6 2 1 Whitelist CESC-US 0.54 0.67 0 0 0.48 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 4 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 12 44435964 53757993 5 6 138 1 1 1 2 1 0.9 0 11 0 0 11 4 4 25 5 5 48.97 54.8 41.45 1 4 5 Whitelist CESC-US 0.93 0 0 0 0.92 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 11 0.04 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 13 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 0 0 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 14 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 0 0 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 15 31826726 35878974 1 1 138 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 48.97 0 99.87 0 2 NA Whitelist CESC-US 0.62 0.41 NA NA 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 2 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 16 11885855 11919312 1 1 138 0 1 0 0 0 0.39 0.79 2 0.37 NA NA NA NA 8 4 4 48.97 46.49 53.41 0 3 5 Whitelist CESC-US 0.62 0.94 0.37 NA 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 2 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 17 11994136 31111086 1 3 138 2 1 0 0 0 0.3 1 8 0 0 8 8 8 8 8 8 48.97 26.62 68.95 0 1 2 Whitelist CESC-US 0.62 1 0 0 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 6 0.02 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 18 NA NA 0 0 138 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.52 NA NA NA 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 0 0 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 19 31663493 31703431 1 1 138 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA 6 3 4 48.97 14.12 85.71 0 1 2 Whitelist CESC-US 0.62 0.92 NA NA 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 2 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 20 35497791 35701253 2 3 138 2 0 0 0 1 0.11 0 4 0 0 4 3 4 12 6 6 48.97 88.21 4.67 0 3 2 Whitelist CESC-US 0.41 0 0 0 0.48 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 5 0.02 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 21 NA NA 0 0 138 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 0 0 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 22 NA NA 0 0 138 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 0 0 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::7c93642d-7e05-40f8-b1ef-a014edcfba42 X 43496702 43541697 1 1 138 0 1 0 0 0 0.39 0.17 2 0 NA NA NA NA NA NA NA 48.97 99.74 0.03 0 1 2 Whitelist CESC-US 0.62 0.38 0 NA 0.59 1 No CESC-US 7c93642d-7e05-40f8-b1ef-a014edcfba42 CESC 0.62 1.67 Cervix-SCC NA 2 0.01 NA 1 CESC-US DO51594 TCGA-DG-A2KJ 7c93642d-7e05-40f8-b1ef-a014edcfba42 female alive C53.9 50 NA 1791 NA Included Cervix-SCC CESC US 0 58.91 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 1 54891377 95270481 1 3 117 0 3 0 0 0 0.03 0.73 6 0 0 6 3 6 8 4 4 33.55 42.54 57.46 8 3 2 Whitelist CESC-US 0.41 0.91 0 0 0.33 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 6 0.03 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 2 58119574 230603660 1 5 117 4 0 1 0 0 0.04 1 10 0 0 10 7 7 11 7 7 33.55 40.83 59.07 4 2 1 Whitelist CESC-US 0.45 1 0 0 0.36 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 10 0.04 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 3 NA NA 0 0 117 0 0 0 0 0 NA 0.58 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.81 0 NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 4 NA NA 0 0 117 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.1 NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 5 NA NA 0 0 117 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.05 NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 6 NA NA 0 0 117 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist CESC-US NA 0.05 NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 7 4806944 22260164 1 1 117 1 0 0 0 0 0.39 0 11 0 0 11 5 5 21 5 5 33.55 68.15 31.61 1 4 3 Whitelist CESC-US 0.62 0 0 0 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 8 101797280 101853480 1 1 117 0 1 0 0 0 0.39 0.67 2 0 NA NA NA NA 5 3 3 33.55 11.63 88.36 1 2 3 Whitelist CESC-US 0.62 0.87 0 NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 9 21601190 21662057 1 1 117 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 33.55 0 99.28 0 2 NA Whitelist CESC-US 0.62 1 0 NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 10 53371482 53401721 2 2 117 0 0 1 1 0 0.57 0.26 2 0 0 NA NA NA 8 0 3 33.55 16.03 83.79 0 4 6 Whitelist CESC-US 0.68 0.5 0 0 0.64 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 4 0.02 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 11 43132115 72465892 1 3 117 1 0 1 1 0 0.8 0 7 0 0 7 7 7 19 7 7 33.55 75.51 23.93 0 3 2 Whitelist CESC-US 0.87 0.02 0 0 0.84 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 6 0.03 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 12 NA NA 0 0 117 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.4 NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 13 58371901 74263490 1 2 117 1 1 0 0 0 0.57 0.45 4 NA 0 4 3 4 6 4 4 33.55 35.7 64.3 0 2 1 Whitelist CESC-US 0.68 0.69 NA 0 0.64 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 4 0.02 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 14 23614159 23687917 1 2 117 0 1 0 0 1 0.39 0.79 3 NA NA NA NA NA 5 3 3 33.55 0.21 98.88 0 2 3 Whitelist CESC-US 0.68 0.94 NA NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 3 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 15 NA NA 0 0 117 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.63 NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 16 2810820 88095309 1 4 117 0 2 0 0 2 0.11 0.25 4 0.61 0.09 4 4 4 5 5 5 33.55 0.77 99.14 0 2 3 Whitelist CESC-US 0.68 0.49 0.61 0.09 0.48 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 6 0.03 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 17 14749376 72402496 1 6 117 0 2 0 1 3 0.3 0.01 8 0 0 8 4 6 9 4 6 33.55 26.7 67.9 5 2 3 Whitelist CESC-US 0.54 0.06 0 0 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 9 0.04 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 18 61330040 61373181 1 1 117 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 33.55 0.06 99.91 2 2 6 Whitelist CESC-US 0.62 0.63 NA NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 19 1231798 1270129 1 1 117 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 4 4 4 33.55 43.21 56.62 0 2 3 Whitelist CESC-US 0.62 0.54 NA NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 20 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 21 18922646 26760076 19 20 117 4 3 5 7 1 0.61 0 11 0 0 11 4 5 19 4 4 33.55 42.66 34.69 1 6 7 Whitelist CESC-US 0.86 0 0 0 0.68 0 Low confidence CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC With other complex events 39 0.17 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb 22 17990001 18027899 1 1 117 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 33.55 0.07 99.93 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::8a4da4f0-30f2-497e-8a7c-988fd6b813cb X 44819104 44967596 1 1 117 1 0 0 0 0 0.39 0.53 2 0 NA NA NA NA NA NA NA 33.55 0.1 99.67 2 1 2 Whitelist CESC-US 0.62 0.76 0 NA 0.59 0 No CESC-US 8a4da4f0-30f2-497e-8a7c-988fd6b813cb CESC 0.79 1.97 Cervix-SCC NA 2 0.01 NA 2 CESC-US DO6252 TCGA-C5-A1BN 8a4da4f0-30f2-497e-8a7c-988fd6b813cb female deceased C53.9 26 166 NA NA Included Cervix-SCC CESC US 1 5.46 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 1 212617853 212684925 3 3 58 2 1 0 0 0 0.3 0 3 0 0 NA NA NA 14 5 5 54.6 48.35 48.56 0 1 4 Whitelist CESC-US 0.62 0 0 0 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 6 0.05 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 2 228444716 228511423 1 1 58 1 0 0 0 0 0.39 0.48 1 0 NA NA NA NA 5 3 3 54.6 99.61 0.29 0 3 NA Whitelist CESC-US 0.62 0.73 0 NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 3 143407073 143456598 1 1 58 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 4 4 4 54.6 52.44 44.41 1 2 3 Whitelist CESC-US 0.62 1 0 NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 4 5144260 40478702 1 2 58 2 0 0 0 0 0.11 0.8 4 0.02 0 4 4 4 9 9 9 54.6 2.71 97.07 0 0 2 Whitelist CESC-US 0.54 0.95 0.02 0 0.48 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 5 178360010 178623587 1 1 58 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 5 5 5 54.6 0.15 99.73 0 1 NA Whitelist CESC-US 0.62 1 0 NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 6 27845361 31146967 1 2 58 2 0 0 0 0 0.11 0.4 4 0 0 4 4 4 19 10 19 54.6 99.85 0 0 3 4 Whitelist CESC-US 0.54 0.64 0 0 0.48 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 7 10371412 10490624 1 1 58 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 54.6 0.07 99.67 0 1 2 Whitelist CESC-US 0.62 0.63 NA NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 8 137143658 137785928 2 2 58 2 0 0 0 0 0.11 1 4 0 0 4 0 3 6 4 4 54.6 99.52 0.48 3 3 1 Whitelist CESC-US 0.54 1 0 0 0.48 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 9 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 10 128884416 129179023 1 1 58 0 0 1 0 0 0.39 0.34 1 0 NA NA NA NA NA NA NA 54.6 0.22 99.67 0 1 NA Whitelist CESC-US 0.62 0.59 0 NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 11 80368625 80596301 1 1 58 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 54.6 0.17 99.27 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 12 49268808 49289653 1 1 58 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 54.6 99.98 0 0 3 NA Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 13 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 14 NA NA 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA 12 7 9 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 15 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 16 NA NA 0 0 58 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.87 NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 17 48983292 48994004 1 1 58 1 0 0 0 0 0.39 0.21 1 0 NA NA NA NA 16 13 15 54.6 95.55 0 0 3 NA Whitelist CESC-US 0.62 0.43 0 NA 0.59 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 18 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 19 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 20 NA NA 0 0 58 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist CESC-US NA 0.61 NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 21 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d 22 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 0 0 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::941f75a1-fea4-4539-ba69-60bb11608f6d X 35136375 120368226 1 2 58 2 0 0 0 0 0.11 0.07 6 0 0 6 3 6 11 7 7 54.6 99.16 0.61 1 3 2 Whitelist CESC-US 0.54 0.21 0 0 0.48 0 No CESC-US 941f75a1-fea4-4539-ba69-60bb11608f6d CESC 0.68 2.71 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO6249 TCGA-C5-A1MI 941f75a1-fea4-4539-ba69-60bb11608f6d female deceased C53.9 50 1083 NA NA Included Cervix-SCC CESC US 1 35.62 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 1 38508299 38587778 1 1 14 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.07 0.04 99.95 0 2 8 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 2 0.07 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 2 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 3 60454223 60585981 1 2 14 1 0 0 1 0 0.57 0.26 3 NA 0 NA NA NA 4 3 3 17.07 44.34 52.58 0 1 0 Whitelist CESC-US 0.68 0.5 NA 0 0.64 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 4 0.14 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 4 187406368 187577644 2 2 14 0 0 1 1 0 0.57 0.24 2 NA 0 NA NA NA 5 3 3 17.07 0.19 99.79 0 2 3 Whitelist CESC-US 0.68 0.48 NA 0 0.64 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 4 0.14 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 8 25760013 100104570 1 2 14 1 1 0 0 0 0.57 0.16 2 NA 0 NA NA NA NA NA NA 17.07 0.01 99.98 0 2 3 Whitelist CESC-US 0.68 0.36 NA 0 0.64 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 4 0.14 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 9 29553888 29580067 1 2 14 0 0 1 0 1 0.39 0.1 2 NA NA NA NA NA 4 0 3 17.07 99.89 0 0 3 5 Whitelist CESC-US 0.68 0.27 NA NA 0.59 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 3 0.11 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 13 45995834 111123139 1 4 14 0 1 1 2 0 0.57 0 8 0 0 8 3 6 10 3 3 17.07 100 0 0 3 1 Whitelist CESC-US 0.68 0.01 0 0 0.64 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 8 0.29 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 19 NA NA 0 0 14 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.48 NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab 22 NA NA 0 0 14 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.36 NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::9aa36ac2-8418-4109-a3c1-63ca8742baab X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US 9aa36ac2-8418-4109-a3c1-63ca8742baab CESC 0.86 1.97 Cervix-SCC NA 0 0 NA 2 CESC-US DO49948 TCGA-EK-A2RE 9aa36ac2-8418-4109-a3c1-63ca8742baab female alive C53.9 26 NA 57 NA Included Cervix-SCC CESC US 0 1.88 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 1 24560981 186268873 1 2 44 1 1 0 0 0 0.57 0.58 8 NA 0.06 8 5 6 14 5 10 91.59 99.94 0.06 0 4 3 Whitelist CESC-US 0.68 0.8 NA 0.06 0.64 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 4 0.05 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 2 168793781 208170412 2 2 44 0 0 1 1 0 0.57 0.58 1 NA 0 NA NA NA NA NA NA 91.59 99.89 0 3 4 NA Whitelist CESC-US 0.68 0.81 NA 0 0.64 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 4 0.05 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 3 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 4 186888874 189311312 2 2 44 1 1 0 0 0 0.57 0.03 3 0 0 NA NA NA 7 7 7 91.59 90.07 9.68 0 4 2 Whitelist CESC-US 0.68 0.1 0 0 0.64 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 4 0.05 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 5 NA NA 0 0 44 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.76 NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 6 NA NA 0 0 44 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.91 NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 7 107409645 108942533 2 2 44 0 0 1 1 0 0.57 0.51 2 0 0 NA NA NA NA NA NA 91.59 99.75 0 0 1 3 Whitelist CESC-US 0.68 0.75 0 0 0.64 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 4 0.05 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 8 128972345 129030942 10 10 44 3 7 0 0 0 0 0 14 0 0 14 3 4 18 4 4 91.59 63.96 35.91 0 43 49 Whitelist CESC-US 0.18 0 0 0 0.14 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 20 0.23 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 9 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 11 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 12 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 13 73720375 73768852 1 1 44 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 91.59 100 0 0 4 6 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 2 0.02 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 14 32337385 32414637 2 2 44 0 0 1 1 0 0.57 0.4 1 NA 0 NA NA NA 4 4 4 91.59 84.09 0 0 4 NA Whitelist CESC-US 0.68 0.65 NA 0 0.64 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 4 0.05 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 16 78677276 78751141 1 1 44 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 91.59 99.82 0.08 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 2 0.02 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 17 37845858 37905298 1 1 44 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 91.59 99.87 0 0 4 NA Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 2 0.02 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 18 33748856 77897788 3 3 44 1 0 1 1 0 0.8 0.11 5 0 0 5 5 5 6 6 6 91.59 44.57 55.11 0 2 4 Whitelist CESC-US 0.87 0.29 0 0 0.84 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 6 0.07 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::a3be445a-a592-4073-815b-47ae41f9c4a0 X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US a3be445a-a592-4073-815b-47ae41f9c4a0 CESC 0.77 3.59 Cervix-AdenoCA NA 0 0 NA 3 CESC-US DO49014 TCGA-C5-A1M9 a3be445a-a592-4073-815b-47ae41f9c4a0 female deceased C53.9 46 1065 NA NA Included Cervix-AdenoCA CESC US 1 35.03 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 1 14796503 15137439 4 10 178 1 2 1 0 6 0.57 0 6 0 0 6 6 6 25 7 9 68.02 85.79 14.21 0 2 3 Whitelist CESC-US 0.86 0.01 0 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 14 0.04 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 2 72018846 242432022 1 11 178 3 7 0 1 0 0.02 1 19 0 0 19 9 9 24 9 9 68.02 84.31 15.6 7 4 2 Whitelist CESC-US 0.34 1 0 0 0.27 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 22 0.06 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 3 137703163 169386773 4 6 178 0 1 2 1 2 0.57 0 9 0 0 9 6 9 25 6 11 68.02 83.86 12.99 2 8 9 Whitelist CESC-US 0.54 0.02 0 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 10 0.03 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 4 75503529 176052241 1 5 178 0 2 0 1 2 0.3 0.65 13 0 0 13 3 5 16 3 3 68.02 41.98 58 0 8 2 Whitelist CESC-US 0.93 0.86 0 0 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 8 0.02 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 5 51481203 64494605 5 6 178 1 2 1 1 1 0.9 0.76 13 0 0 13 11 13 22 11 22 68.02 28.62 68.72 0 2 3 Whitelist CESC-US 0.93 0.92 0 0 0.92 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 11 0.03 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 6 56578609 166217189 1 5 178 1 1 1 1 1 1 0.16 7 0 0 7 4 6 8 4 4 68.02 41.52 58.23 3 2 4 Whitelist CESC-US 0.93 0.36 0 0 1 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 9 0.03 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 7 16974942 106749936 1 3 178 0 3 0 0 0 0.03 0.03 7 0.02 0 7 4 7 8 5 5 68.02 36.49 60.81 1 4 2 Whitelist CESC-US 0.41 0.11 0.02 0 0.33 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 6 0.02 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 8 71032302 129424290 1 7 178 0 5 0 1 1 0.01 0.49 10 0 0 10 5 7 16 5 5 68.02 99.99 0 1 3 4 Whitelist CESC-US 0.47 0.74 0 0 0.19 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 13 0.04 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 9 16616376 16701497 1 1 178 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 68.02 97.45 0 0 4 6 Whitelist CESC-US 0.62 0.05 NA NA 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 2 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 10 NA NA 0 0 178 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist CESC-US NA 0.02 NA NA NA 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 0 0 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 11 133072701 134636862 9 17 178 4 1 3 1 8 0.39 0 14 0 0 14 12 12 23 12 12 68.02 66.44 33.27 2 2 3 Whitelist CESC-US 1 0.62 0 0 0 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 26 0.07 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 False positive; manually removed CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 12 45795436 55773867 6 6 178 2 0 3 1 0 0.34 0.48 3 0 0 NA NA NA 11 8 11 68.02 96.26 0 7 4 3 Whitelist CESC-US 0.62 0.72 0 0 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 12 0.03 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 13 57426491 102982819 1 2 178 1 1 0 0 0 0.57 0.1 4 NA 0 4 4 4 5 4 4 68.02 76.9 23.1 3 4 5 Whitelist CESC-US 0.68 0.26 NA 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 4 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 14 29330840 104134562 1 3 178 1 1 0 0 1 0.57 0.67 2 0 0 NA NA NA NA NA NA 68.02 96.29 0 0 3 4 Whitelist CESC-US 0.87 0.87 0 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 5 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 15 86243015 86259014 1 1 178 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 3 68.02 99.91 0 0 4 6 Whitelist CESC-US 0.62 0.27 NA NA 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 2 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 16 NA NA 0 0 178 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 0 0 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 17 35768565 40446221 11 12 178 4 4 1 2 1 0.48 0 37 0 0 37 3 6 45 3 5 68.02 66.93 28.3 4 8 3 Whitelist CESC-US 0.62 0 0 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 23 0.06 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 18 136641 62571773 1 3 178 0 3 0 0 0 0.03 0.64 5 0.43 0.04 5 4 5 6 4 4 68.02 19.74 75.61 2 2 4 Whitelist CESC-US 0.41 0.85 0.43 0.05 0.33 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 6 0.02 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 19 55659455 56889835 1 1 178 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 5 4 4 68.02 71.09 21.63 5 3 5 Whitelist CESC-US 0.62 0.81 NA NA 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 2 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 20 51765572 51795828 1 1 178 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA 5 4 4 68.02 92.9 0 0 3 4 Whitelist CESC-US 0.62 0.81 NA NA 0.59 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 2 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 21 19551763 27905961 1 2 178 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 6 4 6 68.02 76.35 0 0 5 3 Whitelist CESC-US 0.54 1 NA 0 0.48 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 4 0.01 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af 22 NA NA 0 0 178 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 0 0 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::c13215d9-26a8-4c8b-b4fe-5da6aa3222af X 20627213 61734612 2 4 178 0 1 0 1 2 0.57 0.02 9 0 0 9 3 5 22 6 8 68.02 95.65 0.35 3 5 4 Whitelist CESC-US 3 0.68 0.09 0 0 0.64 0 No CESC-US c13215d9-26a8-4c8b-b4fe-5da6aa3222af CESC 0.68 3.49 Cervix-SCC NA 6 0.02 NA 4 CESC-US DO49956 TCGA-EK-A2RM c13215d9-26a8-4c8b-b4fe-5da6aa3222af female alive C53.9 40 NA 50 NA Included Cervix-SCC CESC US 0 1.64 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 1 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 2 133980503 134031042 1 1 48 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 3 3 16.26 20.03 79.86 0 1 2 Whitelist CESC-US 0.62 0.68 NA NA 0.59 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 3 41369531 189847868 1 9 48 6 1 1 1 0 0.04 0.01 18 0 0 18 8 8 20 9 9 16.26 34.46 65.5 1 1 2 Whitelist CESC-US 0.48 0.03 0 0 0.4 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 18 0.19 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 4 NA NA 0 0 48 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.49 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 5 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 6 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 7 128224253 151967625 1 3 48 2 1 0 0 0 0.3 0.04 4 0 0 4 3 4 7 3 3 16.26 0.63 99.14 0 2 1 Whitelist CESC-US 0.62 0.15 0 0 0.59 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 6 0.06 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 8 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 9 94252696 105985504 1 2 48 0 2 0 0 0 0.11 0.44 4 NA 0 4 4 4 5 5 5 16.26 0.26 99.03 0 2 3 Whitelist CESC-US 0.54 0.69 NA 0 0.48 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 4 0.04 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 10 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 11 99887530 102310671 1 4 48 0 0 1 1 2 0.57 0 2 0 0 NA NA NA 5 0 3 16.26 26.56 73.01 0 1 8 Whitelist CESC-US 0.68 0.01 0 0 0.64 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 6 0.06 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 12 NA NA 0 0 48 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.9 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 13 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 14 80529484 80621512 1 1 48 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 3 3 16.26 0.09 99 0 1 2 Whitelist CESC-US 0.62 0.87 NA NA 0.59 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 15 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 16 83447198 83604368 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.26 0.17 99.73 0 1 2 Whitelist CESC-US 0.62 1 NA NA 0.59 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 17 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 18 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 19 NA NA 0 0 48 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.83 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 21 15698147 47079851 14 14 48 3 2 4 5 0 0.7 0 16 0 0 16 14 16 17 14 14 16.26 21.56 56.1 0 2 3 Whitelist CESC-US 0.81 0 0 0 0.78 1 High confidence CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC Canonical without polyploidization 28 0.29 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af 22 NA NA 0 0 48 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.69 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::dfd30f94-19e3-4838-95df-14a3763419af X NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.76 NA NA NA 1 No CESC-US dfd30f94-19e3-4838-95df-14a3763419af CESC 0.66 2.12 Cervix-SCC NA 0 0 NA 2 CESC-US DO6332 TCGA-DS-A0VL dfd30f94-19e3-4838-95df-14a3763419af female alive C53.9 25 NA 81 NA Included Cervix-SCC CESC US 0 2.66 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 1 12059089 12293408 1 1 63 0 1 0 0 0 0.39 0.48 2 NA NA NA NA NA 12 4 4 28.19 52.84 47.16 0 2 3 Whitelist CESC-US 0.62 0.73 NA NA 0.59 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 2 25467822 239303677 1 6 63 4 1 0 0 1 0.04 0.04 18 0 0 18 5 10 18 5 5 28.19 41.96 57.95 9 1 2 Whitelist CESC-US 0.54 0.14 0 0 0.36 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 11 0.09 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 3 60284958 60640984 1 4 63 4 0 0 0 0 0.01 0.8 4 0 0 4 3 4 10 3 3 28.19 39.55 60.34 0 1 0 Whitelist CESC-US 0.21 0.95 0 0 0.16 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 8 0.06 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 4 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 5 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 6 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 7 146687467 146705311 1 1 63 0 0 1 0 0 0.39 0.58 3 0.35 NA NA NA NA 12 7 11 28.19 99.48 0.29 4 1 2 Whitelist CESC-US 0.62 0.8 0.36 NA 0.59 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 8 NA NA 0 0 63 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.63 NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 9 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 10 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 11 103067924 103705651 9 9 63 2 2 2 3 0 0.95 0 13 0 0 13 0 3 32 3 3 28.19 27.02 69.51 2 31 41 Whitelist CESC-US 0.97 0 0 0 0.97 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 18 0.14 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 12 1355930 18234311 1 2 63 1 0 0 0 1 0.39 1 7 NA NA 7 0 3 12 3 4 28.19 13.6 82.56 0 1 2 Whitelist CESC-US 0.54 1 NA NA 0.59 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 3 0.02 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 13 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 14 61930504 62117622 1 1 63 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 28.19 0.17 98.91 0 2 3 Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 15 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 16 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 17 58643106 58669946 1 1 63 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 28.19 0.03 99.95 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 2 0.02 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 18 5056313 8337769 1 3 63 0 0 2 0 1 0.11 0.03 12 0 0 12 4 4 19 4 4 28.19 59 36.39 1 1 8 Whitelist CESC-US 0.62 0.1 0 0 0.48 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 5 0.04 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 19 13535330 14212369 2 2 63 0 1 0 1 0 0.57 0 4 0 0 4 0 3 16 3 4 28.19 78.39 21.43 0 3 12 Whitelist CESC-US 0.68 0 0 0 0.64 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 4 0.03 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 20 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 21 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa 22 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 0 0 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::e733f289-a0ec-478c-aad9-1378ad26ddfa X 2065471 7915791 1 3 63 3 0 0 0 0 0.03 0.01 6 0 0 6 6 6 14 9 14 28.19 82.08 14.54 3 2 3 Whitelist CESC-US 0.41 0.06 0 0 0.33 0 No CESC-US e733f289-a0ec-478c-aad9-1378ad26ddfa CESC 0.64 2.3 Cervix-SCC NA 6 0.05 NA 2 CESC-US DO6314 TCGA-C5-A2LY e733f289-a0ec-478c-aad9-1378ad26ddfa female alive C53.9 30 NA 2383 NA Included Cervix-SCC CESC US 0 78.39 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 1 151719688 220597001 14 16 63 5 4 2 3 2 0.7 0 8 0 0 8 5 5 16 5 5 86.46 86.5 10.52 0 5 3 Whitelist CESC-US 0.95 0 0 0 0.78 0 Low confidence CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC After polyploidization 30 0.24 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 2 195531116 229574391 2 2 63 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 7 7 7 86.46 97.38 0 0 3 4 Whitelist CESC-US 0.68 1 0 0 0.64 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 3 60451007 189020990 1 3 63 1 2 0 0 0 0.3 0.8 3 0 0 NA NA NA 6 3 6 86.46 98.58 1.37 1 3 5 Whitelist CESC-US 0.62 0.95 0 0 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 6 0.05 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 4 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 5 NA NA 0 0 63 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.95 NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 6 NA NA 0 0 63 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CESC-US NA 0.94 NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 7 151839910 152971975 2 2 63 0 0 1 1 0 0.57 0.58 3 0 0 NA NA NA 13 4 5 86.46 96.92 2.86 0 4 3 Whitelist CESC-US 0.68 0.8 0 0 0.64 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 8 27626156 27644426 1 3 63 0 1 0 0 2 0.39 1 3 NA 0 NA NA NA 4 0 3 86.46 81.85 18.14 0 4 5 Whitelist CESC-US 0.62 1 NA 0 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 9 9676712 117175177 1 2 63 2 0 0 0 0 0.11 1 6 NA 0.04 6 3 4 7 3 4 86.46 96.69 0.2 0 3 4 Whitelist CESC-US 0.54 1 NA 0.04 0.48 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 10 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 11 120960636 124866241 1 2 63 0 2 0 0 0 0.11 0.54 3 0.02 0 NA NA NA 7 3 3 86.46 96.81 2.76 0 3 4 Whitelist CESC-US 0.54 0.77 0.02 0 0.48 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 12 100096604 100118687 1 1 63 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 86.46 99.98 0 0 3 NA Whitelist CESC-US 0.62 0.62 NA NA 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 13 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 14 107057375 107081110 1 1 63 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA 4 3 4 86.46 96.96 0 0 5 NA Whitelist CESC-US 0.62 0.9 NA NA 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 15 26186919 72228880 1 3 63 1 1 0 0 1 0.57 0.25 3 NA 0 NA NA NA 4 0 3 86.46 100 0 1 3 4 Whitelist CESC-US 0.87 0.5 NA 0 0.64 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 5 0.04 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 16 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 17 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 18 44203165 45185091 1 1 63 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.46 98.65 1.26 0 2 3 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 19 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 0 0 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 20 52592589 52746076 1 1 63 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA 5 3 5 86.46 93 0 0 3 5 Whitelist CESC-US 0.62 0.36 NA NA 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 21 36176498 36253899 1 1 63 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA 7 4 4 86.46 74.88 2.48 0 3 4 Whitelist CESC-US 0.62 0.77 NA NA 0.59 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 2 0.02 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 22 27549725 50417447 4 5 63 1 1 1 1 1 1 0 6 0 0 6 0 4 7 0 4 86.46 72.28 25.99 0 1 2 Whitelist CESC-US 0.93 0 0 0 1 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 9 0.07 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::eb59cf69-1997-41b9-bf69-69ad7da292a1 X 86817863 105774927 2 2 63 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 11 5 5 86.46 84.12 12.5 0 2 3 Whitelist CESC-US 0.68 0.06 0 0 0.64 0 No CESC-US eb59cf69-1997-41b9-bf69-69ad7da292a1 CESC 0.4 3.41 Cervix-SCC NA 4 0.03 NA 3 CESC-US DO49001 TCGA-C5-A1MQ eb59cf69-1997-41b9-bf69-69ad7da292a1 female alive C53.9 35 NA 17 NA Included Cervix-SCC CESC US 0 0.56 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 1 94023413 94332999 1 1 40 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 4 85.29 96.64 0 0 3 4 Whitelist CESC-US 0.62 0.62 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 2 191872215 192107862 1 1 40 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 4 3 3 85.29 97.31 0 0 0 3 Whitelist CESC-US 0.62 0.5 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 3 2962791 6243753 4 4 40 1 1 1 1 0 1 0 4 0 0 4 3 4 13 4 4 85.29 96.6 0.24 0 4 1 Whitelist CESC-US 1 0 0 0 1 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 8 0.1 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 4 153389289 187864101 1 4 40 2 0 0 0 2 0.11 0.34 6 0 0 6 6 6 9 7 7 85.29 0.68 99.19 0 0 2 Whitelist CESC-US 0.54 0.59 0 0 0.48 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 6 0.08 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 5 34184197 34215875 1 1 40 1 0 0 0 0 0.39 0.32 1 0 NA NA NA NA 5 3 3 85.29 97.33 0 0 11 NA Whitelist CESC-US 0.62 0.57 0 NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 6 88148127 88216915 2 2 40 0 0 1 1 0 0.57 0.73 4 0 0 4 4 4 7 7 7 85.29 99.86 0 0 3 5 Whitelist CESC-US 0.68 0.91 0 0 0.64 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 4 0.05 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 7 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 8 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 9 139416617 140043002 1 2 40 0 2 0 0 0 0.11 0.67 4 NA 0 4 3 4 8 3 4 85.29 97.38 0 0 1 7 Whitelist CESC-US 0.54 0.87 NA 0 0.48 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 4 0.05 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 10 5436713 83573235 1 6 40 2 2 0 0 2 0.26 0 10 0 0 10 4 6 10 4 6 85.29 99.82 0 0 3 1 Whitelist CESC-US 4 0.62 0.01 0 0 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 10 0.12 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 11 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 1 NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 12 NA NA 0 0 40 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CESC-US NA 0.9 NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 13 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 15 86854661 86895099 1 1 40 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 85.29 99.87 0 0 4 6 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 16 11801416 11841547 1 1 40 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 85.29 99.91 0 0 3 NA Whitelist CESC-US 0.62 0.54 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 17 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 18 48547137 48567998 1 1 40 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 7 3 3 85.29 46.95 48.43 0 0 2 Whitelist CESC-US 0.62 0.54 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 20 NA NA 0 0 40 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA 0.44 NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CESC-US NA NA NA NA NA 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 0 0 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 22 22568689 30086748 1 3 40 2 0 0 0 1 0.11 0.01 5 NA 0 5 3 5 6 4 4 85.29 52.34 47.66 0 2 1 Whitelist CESC-US 0.62 0.05 NA 0 0.48 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 5 0.06 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CESC-US::fb66b7f5-22ca-4d4d-97c2-30e6edfff781 X 29297698 29407084 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 85.29 96.54 0.07 0 2 6 Whitelist CESC-US 0.62 1 NA NA 0.59 0 No CESC-US fb66b7f5-22ca-4d4d-97c2-30e6edfff781 CESC 0.45 3.97 Cervix-SCC NA 2 0.02 NA 5 CESC-US DO49880 TCGA-C5-A2LT fb66b7f5-22ca-4d4d-97c2-30e6edfff781 female alive C53.9 38 NA 2226 NA Included Cervix-SCC CESC US 0 73.22 CLLE-ES::1 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.61 NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 6 78688184 118428892 1 1 5 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 6.47 23.22 76.54 0 1 2 Whitelist CLLE-ES 0.62 0.51 NA NA 0.59 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 13 49883810 52299311 1 1 5 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 6.47 2.1 83.75 0 1 2 Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 14 106330471 106471245 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 6.47 0.29 83.9 0 1 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 22 23105063 23235966 1 1 5 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 6.47 0.26 75.97 0 1 2 Whitelist CLLE-ES 0.62 0.18 NA NA 0.59 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::1 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 1 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6350 1 male deceased C91.1 chemotherapy unknown 44 5573 5573 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 183.32 CLLE-ES::10 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 7 NA NA 0 0 6 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.53 NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 11 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.49 NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 13 49866145 52382882 1 1 6 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 5.04 2.19 97.81 0 1 2 Whitelist CLLE-ES 0.62 0.41 NA NA 0.59 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 14 106176336 106376275 1 2 6 2 0 0 0 0 0.11 0 3 0 0 NA NA NA NA NA NA 5.04 0.34 99.05 0 0 1 Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 4 0.33 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 22 23115075 23247170 1 1 6 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 5.04 0.12 99.88 0 2 NA Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::10 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 10 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6362 10 male C91.1 other therapy unknown 70 1178 1178 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.75 CLLE-ES::115 1 NA NA 0 0 6 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.22 NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.49 NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 12 10150948 10191628 1 1 6 0 0 1 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 5.25 0 99.92 0 2 NA Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 17 8112233 11639999 2 2 6 0 0 1 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 5.25 0 99.97 0 2 NA Whitelist CLLE-ES 0.68 0 NA 0 0.64 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 4 0.33 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::115 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 115 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52700 115 male alive C91.1 chemotherapy unknown 62 7174 7174 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 235.99 CLLE-ES::12 1 177162598 180235196 1 1 5 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 5 5 5 0.56 2.3 97.69 0 2 3 Whitelist CLLE-ES 0.62 0.59 NA NA 0.59 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 2 59155392 61892669 1 1 5 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA 5 3 3 0.56 1.28 95.64 0 2 3 Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.55 NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 6 NA NA 0 0 5 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.51 NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 14 106330458 106494135 1 1 5 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 0.56 0 99.2 0 2 NA Whitelist CLLE-ES 0.62 0.04 NA NA 0.59 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::12 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 12 CLLE 0.9 2.01 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6364 12 female alive C91.1 other therapy unknown 59 5535 5535 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 182.07 CLLE-ES::122 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 2 89160441 89185657 1 1 3 0 0 1 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 5 0.07 99.83 1 1 NA Whitelist CLLE-ES 0.62 0.47 NA NA 0.59 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.41 NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 14 NA NA 0 0 3 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.25 NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::122 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 122 CLLE 0.91 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52701 122 male alive C91.1 chemotherapy unknown 57 5908 5908 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 194.34 CLLE-ES::125 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 2 89132285 89159124 1 1 2 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 4.96 0.15 99.76 0 1 NA Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::125 X 2366662 2399101 1 1 2 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 4.96 100 0 0 1 NA Whitelist CLLE-ES 0.62 0.26 NA NA 0.59 0 No CLLE-ES 125 CLLE 0.96 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO7018 125 male alive C91.1 no treatment 60 1288 1288 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 42.37 CLLE-ES::128 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 11 106489591 115109092 1 1 3 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 9.63 6.38 93.18 0 1 2 Whitelist CLLE-ES 0.62 0.33 NA NA 0.59 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 14 106330846 106791006 1 2 3 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 9.63 0.43 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.02 NA 0 0.48 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 4 0.67 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::128 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 128 CLLE 0.91 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6450 128 male alive C91.1 other therapy unknown 45 4450 4450 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.38 CLLE-ES::137 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 14 106329314 106829605 1 2 2 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 5 0.46 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.01 NA 0 0.48 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 4 1 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::137 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 137 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7024 137 male alive C91.1 no treatment 50 9403 9403 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 309.31 CLLE-ES::139 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 13 50255194 51776601 1 1 4 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 5 1.32 98.68 0 1 2 Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 14 106239765 106452671 1 2 4 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 5 0.08 99.08 0 1 2 Whitelist CLLE-ES 0.54 0.03 NA 0 0.48 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 4 0.5 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 22 23199232 23235964 1 1 4 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5 0.07 99.93 0 1 2 Whitelist CLLE-ES 0.62 0.16 NA NA 0.59 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::139 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 139 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52703 139 male alive C91.1 chemotherapy unknown 63 4429 4429 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 145.69 CLLE-ES::141 1 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 2 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 3 47030792 48917744 1 1 31 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 6.16 0.95 98.91 0 1 2 Whitelist CLLE-ES 0.62 0.9 NA NA 0.59 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 2 0.03 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 4 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 5 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 6 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 7 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 8 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 9 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 10 103620203 104177861 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.16 0.41 99.47 0 1 2 Whitelist CLLE-ES 0.62 1 NA NA 0.59 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 2 0.03 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 11 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 12 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 1 NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 13 NA NA 0 0 31 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 0 NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 14 58585303 58802908 1 2 31 1 0 0 0 1 0.39 0 1 0 NA NA NA NA 4 3 4 6.16 1.15 98.85 0 1 NA Whitelist CLLE-ES 0.54 0 0 NA 0.59 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 3 0.05 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 15 37463478 41576134 1 4 31 0 0 0 1 3 0.39 0 3 0 0 NA NA NA 9 9 9 6.16 3.36 96.64 0 2 1 Whitelist CLLE-ES 21 0.62 0 0 0 0.59 1 Linked to high confidence CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL With other complex events 5 0.08 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 17 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 18 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 20 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 21 16368954 25156515 7 16 31 2 0 3 2 9 0.44 0 8 0 0 8 8 8 11 11 11 6.16 3.66 73.7 0 1 2 Whitelist CLLE-ES 0.62 0 0 0 0.64 1 High confidence CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL Canonical without polyploidization 23 0.37 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::141 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 1 No CLLE-ES 141 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6934 141 male deceased C91.1 chemotherapy unknown 68 2698 2698 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::148 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 12 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.33 NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 14 106330072 106370545 1 1 3 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 9.22 0.16 96.29 0 0 2 Whitelist CLLE-ES 0.62 0.25 NA NA 0.59 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 2 0.33 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 22 23223570 23235965 1 1 3 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 9.22 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.13 NA NA 0.59 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 2 0.33 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::148 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 148 CLLE 0.46 2.02 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6946 148 male alive C91.1 other therapy unknown 50 1882 1882 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.91 CLLE-ES::15 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 2 89160410 89326675 1 2 7 2 0 0 0 0 0.11 0.11 3 NA 0 NA NA NA NA NA NA 4.96 0.07 99.84 0 2 1 Whitelist CLLE-ES 0.54 0.29 NA 0 0.48 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 5 NA NA 0 0 7 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.2 NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 14 106329470 106829594 1 3 7 3 0 0 0 0 0.03 0 1 0 0 NA NA NA NA NA NA 4.96 0 99.52 0 2 NA Whitelist CLLE-ES 0.41 0 0 0 0.33 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 6 0.43 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::15 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 15 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6368 15 male alive C91.1 chemotherapy unknown 55 4706 4706 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 154.8 CLLE-ES::151 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 2 89160426 89185673 1 1 6 0 0 1 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 4.96 0.12 99.79 0 1 NA Whitelist CLLE-ES 0.62 0.66 NA NA 0.59 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 10 42437528 42489655 1 1 6 0 0 1 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 4.96 0 99.82 0 2 NA Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 13 50275922 51637386 1 1 6 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 4.96 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.41 NA NA 0.59 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 14 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.06 NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 18 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::151 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 151 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52704 151 male deceased C91.1 no treatment 71 1455 1455 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 47.86 CLLE-ES::157 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 3 6 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 13 49811921 51595337 1 1 2 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 5.03 1.55 98.45 0 1 2 Whitelist CLLE-ES 0.62 0.2 NA NA 0.59 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 14 106325554 106364985 1 1 2 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 5.03 0.16 99.08 0 1 2 Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::157 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 157 CLLE 0.99 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6470 157 male alive C91.1 other therapy unknown 69 1630 1630 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 53.62 CLLE-ES::16 1 158895713 207110372 6 25 82 1 2 2 1 19 0.88 0 8 0 0 8 8 8 9 9 9 9.85 0 99.99 0 1 2 Whitelist CLLE-ES 6 0.87 0 0 0 0.91 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 31 0.19 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 False positive; manually removed CLLE-ES::16 2 231100714 231195000 1 1 82 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 9.85 0 99.9 0 2 NA Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 2 0.01 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 3 66307720 66848199 1 1 82 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 9.85 0 99.95 0 2 NA Whitelist CLLE-ES 0.62 0.11 NA NA 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 2 0.01 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 4 NA NA 0 0 82 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.15 NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 5 NA NA 0 0 82 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.2 NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 6 87781500 137889692 11 36 82 5 2 3 1 25 0.36 0 11 0 0 11 11 11 13 13 13 9.85 1.05 98.8 0 2 1 Whitelist CLLE-ES 1 0.68 0 0 0 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 47 0.29 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 False positive; manually removed CLLE-ES::16 7 NA NA 0 0 82 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.33 NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 8 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 9 NA NA 0 0 82 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.63 NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 10 NA NA 0 0 82 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 0 NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 11 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 12 10764263 13123777 3 5 82 1 1 0 1 2 0.8 0 1 0 0 NA NA NA NA NA NA 9.85 0 99.92 0 2 NA Whitelist CLLE-ES 1 0.93 0 0 0 0.84 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 8 0.05 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 13 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 14 106330469 107178839 1 1 82 1 0 0 0 0 0.39 1 2 NA 0 NA NA NA NA NA NA 9.85 0.79 99.05 0 1 2 Whitelist CLLE-ES 0.62 1 NA 0 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 2 0.01 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 16 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 17 NA NA 0 0 82 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.9 NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 18 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 19 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 20 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 22 23154778 23241802 1 1 82 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 9.85 0.17 99.83 0 1 2 Whitelist CLLE-ES 0.62 0.84 NA NA 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 2 0.01 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::16 X 7804539 7916801 1 1 82 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 9.85 100 0 0 1 NA Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 16 CLLE 0.85 1.99 Lymph-CLL NA 2 0.01 NA 2 CLLE-ES DO6370 16 male alive C91.1 chemotherapy unknown 59 6965 6965 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 229.11 CLLE-ES::166 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 2 89161072 89185672 2 2 8 0 0 1 1 0 0.57 0.14 2 NA 0 NA NA NA NA NA NA 9.22 0.16 96.77 0 1 2 Whitelist CLLE-ES 0.68 0.34 NA 0 0.64 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 4 0.25 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 3 NA NA 0 0 8 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.27 NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 7 52171265 52397547 1 1 8 0 1 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 9.22 0 99.77 0 2 NA Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 2 0.12 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 14 106329511 106471248 1 2 8 2 0 0 0 0 0.11 0.02 1 NA 0 NA NA NA NA NA NA 9.22 0 99.1 0 2 NA Whitelist CLLE-ES 0.54 0.09 NA 0 0.48 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 4 0.25 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 17 NA NA 0 0 8 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.42 NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::166 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 166 CLLE 0.9 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6474 166 male alive C91.1 chemotherapy unknown 66 2596 2596 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.39 CLLE-ES::177 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 3 49348207 59693137 2 2 5 1 0 1 0 0 0.57 0 3 0 0 NA NA NA 9 9 9 2.04 21.38 75.56 0 1 2 Whitelist CLLE-ES 0.68 0.02 0 0 0.64 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 4 0.4 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 6 165891125 165989099 1 1 5 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 2.04 0.06 99.77 0 2 3 Whitelist CLLE-ES 0.62 0.51 NA NA 0.59 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 2 0.2 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 10 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.44 NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 14 NA NA 0 0 5 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.35 NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::177 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 177 CLLE 0.8 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:1 2 CLLE-ES DO52706 177 female alive C91.1 chemotherapy unknown 75 1914 1914 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 62.96 CLLE-ES::179 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 2 89161440 89246826 1 1 2 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 4.98 0 99.91 0 2 NA Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 14 106330463 106351888 1 1 2 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 4.98 0.24 99.07 0 1 2 Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::179 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 179 CLLE 0.94 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52707 179 male alive C91.1 chemotherapy unknown 72 4743 4743 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 156.02 CLLE-ES::181 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 14 106330073 106382688 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 5.31 0.05 84.05 0 1 NA Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 15 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.17 NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::181 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 181 CLLE 0.51 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6492 181 male alive C91.1 other therapy unknown 49 3475 3475 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 114.31 CLLE-ES::188 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 2 16950269 89399352 1 2 7 1 0 0 1 0 0.57 0.11 2 NA 0 NA NA NA NA NA NA 5.19 0.55 96.76 0 1 2 Whitelist CLLE-ES 0.68 0.29 NA 0 0.64 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 13 28314285 51404380 1 3 7 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 5.19 5.07 94.79 0 1 2 Whitelist CLLE-ES 0.87 0.01 0 0 0.84 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 6 0.43 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 14 106330070 106725202 2 2 7 2 0 0 0 0 0.11 0.02 2 NA 0 NA NA NA NA NA NA 5.19 0.37 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.08 NA 0 0.48 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::188 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 188 CLLE 0.98 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6504 188 male deceased C91.1 chemotherapy unknown 68 2543 2543 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 83.65 CLLE-ES::192 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.39 NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 13 NA NA 0 0 3 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.27 NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 14 106329507 107198933 1 1 3 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 0.87 0.99 98.87 0 1 NA Whitelist CLLE-ES 0.62 0.02 NA NA 0.59 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::192 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 192 CLLE 0.93 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6513 192 female alive C91.1 monoclonal antibodies (for liquid tumours) unknown 73 1807 1807 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 59.44 CLLE-ES::199 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 2 89132285 89162702 1 1 9 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 5.2 0.09 99.82 0 1 NA Whitelist CLLE-ES 0.62 0.77 NA NA 0.59 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 3 46306305 48021594 1 1 9 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 5.2 0.87 99.08 0 1 2 Whitelist CLLE-ES 0.62 0.72 NA NA 0.59 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 13 49690974 52431729 1 1 9 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 5.2 2.38 97.62 0 1 2 Whitelist CLLE-ES 0.62 0.51 NA NA 0.59 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 14 106239576 107012959 1 3 9 3 0 0 0 0 0.03 0 1 0 0 NA NA NA NA NA NA 5.2 0.72 98.97 0 1 NA Whitelist CLLE-ES 0.41 0 0 0 0.33 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 6 0.33 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 17 73225973 74853264 1 1 9 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 5.2 2 97.98 0 1 2 Whitelist CLLE-ES 0.62 0.45 NA NA 0.59 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 22 23055679 23235966 1 1 9 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 5.2 1.67 98.33 0 1 2 Whitelist CLLE-ES 0.62 0.27 NA NA 0.59 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::199 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 199 CLLE 0.85 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52708 199 male alive C91.1 other therapy unknown 75 2127 2127 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 69.97 CLLE-ES::2 1 NA NA 0 0 8 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.73 NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 2 89132283 89309474 1 2 8 2 0 0 0 0 0.11 0.02 1 NA 0 NA NA NA 5 5 5 6.12 1.06 96.24 0 1 NA Whitelist CLLE-ES 0.54 0.09 NA 0 0.48 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 4 0.25 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 12 NA NA 0 0 8 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.57 NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 14 106330466 106346892 1 1 8 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 3 3 6.12 0.61 99.39 0 1 2 Whitelist CLLE-ES 0.62 0.09 NA NA 0.59 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 2 0.12 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 21 NA NA 0 0 8 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.26 NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 22 23192830 23241800 1 1 8 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 6.12 0.1 99.9 0 0 2 Whitelist CLLE-ES 0.62 0.25 NA NA 0.59 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 2 0.12 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::2 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 2 CLLE 0.73 2.09 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6351 2 female deceased C91.1 other therapy unknown 59 1976 1976 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 65 CLLE-ES::20 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 3 46581922 49805226 1 1 8 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 8.76 1.63 98.23 0 1 2 Whitelist CLLE-ES 0.62 0.69 NA NA 0.59 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 8 108519850 128772069 1 3 8 0 1 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 8.76 0 99.99 0 2 NA Whitelist CLLE-ES 0.87 0 0 0 0.84 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 6 0.38 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 14 106330846 106354415 1 1 8 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 8.76 0.02 84.06 0 1 2 Whitelist CLLE-ES 0.62 0.09 NA NA 0.59 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::20 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 20 CLLE 0.5 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6378 20 male alive C91.1 chemotherapy unknown 59 3565 3565 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.27 CLLE-ES::23 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.55 NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 11 77177007 117609446 1 1 5 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 7.64 29.95 69.49 0 1 2 Whitelist CLLE-ES 0.62 0.44 NA NA 0.59 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 14 106329468 107178847 3 3 5 2 0 0 1 0 0.3 0 3 0 0 NA NA NA NA NA NA 7.64 0.78 99.06 0 2 1 Whitelist CLLE-ES 0.62 0 0 0 0.59 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 6 0.6 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.32 NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::23 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 23 CLLE 0.96 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6382 23 male alive C91.1 other therapy unknown 57 3929 3929 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 129.24 CLLE-ES::244 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 5 84715700 84973926 1 1 5 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 0.08 0 99.86 0 2 NA Whitelist CLLE-ES 0.62 0.52 NA NA 0.59 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 8 26748764 26769601 1 1 5 0 0 0 1 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 0.08 0 99.99 0 2 NA Whitelist CLLE-ES 0.62 0.46 NA NA 0.59 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 13 50445025 51448202 2 2 5 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 4 3 3 0.08 2.12 97.88 0 1 2 Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::244 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 244 CLLE 0.69 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52709 244 female alive C91.1 chemotherapy unknown 63 6254 6254 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 205.72 CLLE-ES::26 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 13 34068273 55642022 1 1 1 1 0 0 0 0 0.39 0.03 4 NA NA 4 3 4 5 3 3 6.82 18.73 81.27 0 1 0 Whitelist CLLE-ES 0.62 0.12 NA NA 0.59 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 2 1 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::26 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 26 CLLE 0.98 1.91 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6388 26 male deceased C91.1 other therapy unknown 47 3158 3158 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.88 CLLE-ES::277 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 14 106329465 106380229 1 1 1 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 4.28 0.5 98.6 0 2 NA Whitelist CLLE-ES 0.62 0.12 NA NA 0.59 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 2 1 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::277 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 277 CLLE 0.8 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6549 277 female alive C91.1 no treatment 56 3269 3269 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 107.53 CLLE-ES::278 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 11 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.44 NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 14 106240209 106691672 1 2 5 1 0 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 5.65 0.42 98.97 0 1 NA Whitelist CLLE-ES 0.68 0 0 0 0.64 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::278 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 278 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6552 278 male deceased C91.1 no treatment 61 2414 2414 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 79.41 CLLE-ES::282 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 14 106240171 106452670 1 2 3 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 6.98 0.08 99.08 0 1 2 Whitelist CLLE-ES 0.54 0.02 NA 0 0.48 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 4 0.67 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 19 NA NA 0 0 3 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.18 NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::282 X NA NA 0 0 3 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.34 NA NA NA 0 No CLLE-ES 282 CLLE 0.97 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6558 282 female deceased C91.1 no treatment 86 1037 1037 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.11 CLLE-ES::283 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 3 NA NA 0 0 8 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.27 NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 6 58596737 62065669 1 1 8 0 1 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 0.24 0 99.85 0 2 NA Whitelist CLLE-ES 0.62 0.23 NA NA 0.59 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 11 68282846 68411825 1 1 8 1 0 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 0.24 0 99.57 0 2 NA Whitelist CLLE-ES 0.62 0.57 NA NA 0.59 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 12 NA NA 0 0 8 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.57 NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 13 48832667 51859709 2 2 8 2 0 0 0 0 0.11 0 5 0 0 5 0 3 6 0 3 0.24 2.53 97.36 0 1 0 Whitelist CLLE-ES 0.54 0.01 0 0 0.48 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 4 0.25 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 19 NA NA 0 0 8 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.05 NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::283 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 283 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51967 283 female alive C91.1 other therapy unknown 54 6099 6099 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 200.62 CLLE-ES::290 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 2 NA NA 0 0 8 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.34 NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 7 NA NA 0 0 8 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.61 NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 8 29032170 92930490 1 1 8 0 0 0 1 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 4.2 56.23 43.66 0 2 3 Whitelist CLLE-ES 0.62 0.59 NA NA 0.59 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 11 79577725 116065780 1 1 8 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 4.2 27.03 72.42 0 1 2 Whitelist CLLE-ES 0.62 0.57 NA NA 0.59 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 14 106239115 106573232 1 3 8 3 0 0 0 0 0.03 0 2 0 0 NA NA NA 4 0 3 4.2 0.36 99.5 0 1 2 Whitelist CLLE-ES 0.41 0.01 0 0 0.33 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 6 0.38 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::290 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 290 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6561 290 female deceased C91.1 other therapy unknown 63 686 686 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 22.57 CLLE-ES::296 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 2 89132281 89277988 1 1 5 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 9.26 0.14 99.75 0 1 NA Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 2 0.2 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 9 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.06 NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 13 50253874 51644122 1 1 5 0 0 1 0 0 0.39 0 3 NA NA NA NA NA NA NA NA 9.26 1.09 98.91 0 2 1 Whitelist CLLE-ES 0.62 0 NA NA 0.59 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 2 0.2 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 14 106329451 106962931 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 9.26 0 99.76 0 2 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 2 0.2 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::296 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 296 CLLE 0.99 1.97 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 CLLE-ES DO52710 296 male deceased C91.1 chemotherapy unknown 86 1177 1177 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 38.72 CLLE-ES::3 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 13 50551420 51386796 1 1 1 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 0 3 5.01 0.83 99.17 0 0 1 Whitelist CLLE-ES 0.62 0.12 NA NA 0.59 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 2 1 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::3 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 3 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6352 3 male alive C91.1 chemotherapy unknown 45 5327 5327 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 175.23 CLLE-ES::30 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 2 89161076 89185673 1 1 4 0 0 0 1 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 5.25 0 99.9 0 2 NA Whitelist CLLE-ES 0.62 0.13 NA NA 0.59 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 13 47560220 53040166 1 1 4 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 5.25 4.76 95.24 0 1 2 Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 14 106330471 106376271 1 1 4 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 5.25 0.4 99.09 0 1 2 Whitelist CLLE-ES 0.62 0.3 NA NA 0.59 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::30 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 30 CLLE 0.92 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6394 30 male deceased C91.1 other therapy unknown 64 2611 2611 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 85.89 CLLE-ES::306 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.42 NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.36 NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 8 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.34 NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 11 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.33 NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 19 53946046 53983559 1 1 3 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 11.83 0 99.83 0 2 NA Whitelist CLLE-ES 0.62 0.18 NA NA 0.59 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::306 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 306 CLLE 0.98 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6580 306 male deceased C91.1 other therapy unknown 61 1153 1153 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 37.93 CLLE-ES::308 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 9 6539800 6550031 1 1 2 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 4.97 0 99.3 0 2 NA Whitelist CLLE-ES 0.62 0.22 NA NA 0.59 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 14 106329503 106363820 1 1 2 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 4.97 0.68 99.08 0 1 2 Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::308 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 308 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6585 308 male alive C91.1 no treatment 80 3327 3327 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 109.44 CLLE-ES::318 1 NA NA 0 0 7 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.69 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 4 91482428 91528800 1 1 7 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 4.58 0 99.98 0 2 NA Whitelist CLLE-ES 0.62 0.63 NA NA 0.59 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 2 0.14 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 5 NA NA 0 0 7 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.2 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 6 NA NA 0 0 7 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.6 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 11 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.53 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 14 106330469 106452663 1 1 7 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 4 4 4 4.58 0.37 99.47 0 1 2 Whitelist CLLE-ES 0.62 0.42 NA NA 0.59 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 2 0.14 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 15 NA NA 0 0 7 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.06 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 16 NA NA 0 0 7 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.39 NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 19 18791772 21216228 1 1 7 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 4.58 4.1 95.73 0 1 2 Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 2 0.14 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::318 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 318 CLLE 0.96 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6610 318 female alive C91.1 chemotherapy unknown 67 2235 2235 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 73.52 CLLE-ES::32 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 14 106330103 106380221 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 9.22 0 99.1 0 2 NA Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 2 0.5 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 22 23135275 23260337 1 1 2 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 9.22 0.24 99.76 0 1 2 Whitelist CLLE-ES 0.62 0.09 NA NA 0.59 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 2 0.5 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::32 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 32 CLLE 0.81 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6396 32 male deceased C91.1 no treatment 76 2363 2363 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.73 CLLE-ES::33 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 4 121742333 160645479 1 2 8 0 0 1 1 0 0.57 0.1 1 NA 0 NA NA NA NA NA NA 6 0 99.8 0 2 NA Whitelist CLLE-ES 0.68 0.26 NA 0 0.64 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 4 0.25 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 13 50559117 51518790 1 1 8 1 0 0 0 0 0.39 0.24 4 NA NA 4 3 4 5 3 3 6 0.83 99.17 0 1 0 Whitelist CLLE-ES 0.62 0.48 NA NA 0.59 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 2 0.12 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 14 68573349 106357558 1 2 8 2 0 0 0 0 0.11 0.02 3 NA 0 NA NA NA 6 3 5 6 28.82 68.25 1 0 1 Whitelist CLLE-ES 0.54 0.09 NA 0 0.48 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 4 0.25 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 22 23055685 23247169 1 3 8 1 2 0 0 0 0.3 0 3 0 0 NA NA NA 4 0 3 6 1.4 98.6 0 0 1 Whitelist CLLE-ES 0.62 0 0 0 0.59 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 6 0.38 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::33 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 33 CLLE 0.57 1.95 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:2 2 CLLE-ES DO6398 33 male deceased C91.1 chemotherapy unknown 69 3987 3987 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 131.15 CLLE-ES::342 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 2 89132284 89326670 1 1 4 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 13.61 0.12 99.77 0 1 NA Whitelist CLLE-ES 0.62 0.54 NA NA 0.59 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 2 0.25 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 11 75517432 75537027 1 1 4 0 1 0 0 0 0.39 0.01 1 NA 0 NA NA NA NA NA NA 13.61 0 99.57 0 2 NA Whitelist CLLE-ES 0.62 0.05 NA 0 0.59 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 2 0.25 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 14 NA NA 0 0 4 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.3 NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::342 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 342 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6665 342 male alive C91.1 chemotherapy unknown 61 2963 2963 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 97.47 CLLE-ES::343 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 2 89161436 89246817 1 1 9 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 5.26 0.13 99.76 0 1 NA Whitelist CLLE-ES 0.62 0.77 NA NA 0.59 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 3 60568165 60659889 1 1 9 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 5.26 0 99.86 0 2 NA Whitelist CLLE-ES 0.62 0.01 0 NA 0.59 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 13 38876671 51692874 2 4 9 2 0 0 0 2 0.11 0 3 0 0 NA NA NA NA NA NA 5.26 7.62 92.38 0 2 1 Whitelist CLLE-ES 0.68 0 0 0 0.48 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 6 0.33 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 14 106330517 106361379 1 1 9 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 5.26 0.23 99.08 0 1 2 Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::343 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 343 CLLE 0.86 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52711 343 male deceased C91.1 no treatment 60 2698 2698 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 88.75 CLLE-ES::356 1 16362083 16385175 1 1 7 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 8.68 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.26 NA NA 0.59 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 2 89132281 89246820 1 3 7 2 0 0 1 0 0.3 0.02 4 0 0 4 3 4 6 3 6 8.68 37.19 60.1 0 1 2 Whitelist CLLE-ES 0.62 0.07 0 0 0.59 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 6 0.43 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 13 50531226 51491697 1 2 7 1 0 0 0 1 0.39 0.02 1 NA NA NA NA NA NA NA NA 8.68 0 99.88 0 2 NA Whitelist CLLE-ES 0.68 0.09 NA NA 0.59 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 3 0.21 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 14 106330526 107169930 1 1 7 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 8.68 0.78 99.09 0 0 2 Whitelist CLLE-ES 0.62 0.42 NA NA 0.59 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::356 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 356 CLLE 0.95 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7084 356 male deceased C91.1 no treatment 60 1865 1865 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 61.35 CLLE-ES::358 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 2 89132284 89442056 1 2 8 2 0 0 0 0 0.11 0.14 2 NA 0 NA NA NA NA NA NA 5.31 0.08 99.82 0 1 2 Whitelist CLLE-ES 0.54 0.34 NA 0 0.48 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 4 0.25 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 13 41241809 51605263 4 4 8 2 0 1 1 0 0.57 0 5 0 0 5 5 5 5 5 5 5.31 8.94 91.06 0 2 1 Whitelist CLLE-ES 0.68 0 0 0 0.64 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 8 0.5 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 14 106330470 106370542 1 1 8 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 5.31 0 99.09 0 2 NA Whitelist CLLE-ES 0.62 0.46 NA NA 0.59 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 22 23055683 23247169 1 1 8 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 5.31 1.43 98.57 0 1 2 Whitelist CLLE-ES 0.62 0.25 NA NA 0.59 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 2 0.12 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::358 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 358 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6690 358 male deceased C91.1 chemotherapy unknown 80 94 94 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 3.09 CLLE-ES::367 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 13 50513559 51482097 1 1 1 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 5.11 0.84 99.16 0 1 2 Whitelist CLLE-ES 0.62 0.12 NA NA 0.59 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 2 1 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::367 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 367 CLLE 0.79 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7108 367 male alive C91.1 no treatment 63 1868 1868 Current reformed smoker for <= 15 years NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 61.45 CLLE-ES::371 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 11 62555229 62571470 1 1 4 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 0.61 1.61 97.96 0 1 NA Whitelist CLLE-ES 0.62 0.05 NA NA 0.59 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 14 106330467 106351898 1 1 4 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 0.61 0.46 99.05 0 0 NA Whitelist CLLE-ES 0.62 0.3 NA NA 0.59 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 17 NA NA 0 0 4 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.27 NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 22 23135490 23235962 1 1 4 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 4 4 0.61 23.98 64.91 0 1 2 Whitelist CLLE-ES 0.62 0.16 NA NA 0.59 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::371 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 371 CLLE 1 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6695 371 female alive C91.1 chemotherapy unknown 82 2659 2659 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.47 CLLE-ES::372 1 NA NA 0 0 8 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.73 NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 2 89132285 89159120 1 1 8 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 12.61 0 99.89 0 2 NA Whitelist CLLE-ES 0.62 0.34 NA NA 0.59 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 2 0.12 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 5 NA NA 0 0 8 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.65 NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 8 36655425 77999619 1 1 8 0 0 0 1 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 12.61 71.75 28.25 0 2 3 Whitelist CLLE-ES 0.62 0.59 NA NA 0.59 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 2 0.12 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 10 5011453 5040339 1 1 8 0 0 1 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 12.61 0.34 99.48 0 2 NA Whitelist CLLE-ES 0.62 0.56 NA NA 0.59 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 2 0.12 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 14 106330503 106518407 1 2 8 1 0 0 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 12.61 0.18 99.05 0 1 NA Whitelist CLLE-ES 0.68 0.01 NA NA 0.59 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 3 0.19 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 18 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.07 NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::372 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 372 CLLE 1 1.98 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7112 372 male alive C91.1 other therapy unknown 78 3150 3150 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 103.62 CLLE-ES::386 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 2 89160116 89309483 1 1 5 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 6.28 0 99.89 0 2 NA Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 6 906097 116046408 1 3 5 1 0 1 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 6.28 16.62 83.23 0 2 1 Whitelist CLLE-ES 0.87 0 0 0 0.84 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 6 0.6 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::386 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 386 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7124 386 male deceased C91.1 other therapy unknown 86 874 874 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 28.75 CLLE-ES::39 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 2 89161435 89197303 1 1 7 0 0 0 1 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 4.96 0 99.9 0 2 NA Whitelist CLLE-ES 0.62 0.7 NA NA 0.59 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 3 60866863 60939423 1 1 7 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 4.96 0.04 99.79 0 1 2 Whitelist CLLE-ES 0.62 0.64 NA NA 0.59 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 14 106212035 106326412 2 2 7 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 4.96 0.3 98.94 0 1 NA Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::39 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 39 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6402 39 male alive C91.1 other therapy unknown 58 3144 3144 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 103.42 CLLE-ES::393 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 2 89161435 89197303 1 1 3 0 0 0 1 0 0.39 0.23 2 NA NA NA NA NA 4 0 3 0.05 0.05 99.86 0 1 4 Whitelist CLLE-ES 0.62 0.47 NA NA 0.59 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 13 50586024 51555011 1 1 3 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 0.05 0.84 99.16 0 1 2 Whitelist CLLE-ES 0.62 0.27 NA NA 0.59 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 22 23029744 23241806 1 1 3 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 0.05 0.41 99.59 0 1 2 Whitelist CLLE-ES 0.62 0.13 NA NA 0.59 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::393 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 393 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7136 393 female alive C91.1 no treatment 55 3873 3873 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 127.4 CLLE-ES::4 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 13 48679989 74276145 1 2 3 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 0.84 22.22 77.78 0 1 2 Whitelist CLLE-ES 0.54 0.02 NA 0 0.48 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 4 0.67 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 14 106330122 106380231 1 1 3 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 0.84 0.22 99.05 0 1 NA Whitelist CLLE-ES 0.62 0.25 NA NA 0.59 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::4 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 4 CLLE 0.88 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6353 4 female alive C91.1 other therapy unknown 41 4452 4452 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 146.45 CLLE-ES::435 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 2 89161432 89185672 2 2 4 0 0 1 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 4.95 0 99.91 0 2 NA Whitelist CLLE-ES 0.68 0.01 NA 0 0.64 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 4 0.5 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 14 106330464 106791006 1 1 4 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 4.95 0 99.48 0 2 NA Whitelist CLLE-ES 0.62 0.3 NA NA 0.59 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 2 0.25 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::435 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 435 CLLE 1 1.93 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 2 CLLE-ES DO7166 435 male alive C91.1 other therapy unknown 62 1890 1890 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 62.17 CLLE-ES::44 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 2 89161437 89976493 1 1 2 0 0 0 1 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 4.95 0 99.89 0 2 NA Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 14 106330475 106370541 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 4.95 0 99.09 0 2 NA Whitelist CLLE-ES 0.62 0.19 NA NA 0.59 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 2 0.5 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::44 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 44 CLLE 0.95 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6410 44 male deceased C91.1 other therapy unknown 53 2653 2653 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 87.27 CLLE-ES::442 1 95627706 95680034 1 1 4 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 9.44 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.52 NA NA 0.59 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 13 50489915 52753719 1 1 4 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 9.44 1.97 98.03 0 1 2 Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 14 106330469 106452663 1 2 4 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 9.44 0.11 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.03 NA 0 0.48 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 4 0.5 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::442 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 442 CLLE 0.94 1.94 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7172 442 male deceased C91.1 other therapy unknown 61 5473 5473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 180.03 CLLE-ES::467 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 14 22918114 106829594 1 3 3 3 0 0 0 0 0.03 0 3 0 0 NA NA NA 4 4 4 0.02 0.51 99.01 1 1 2 Whitelist CLLE-ES 0.41 0 0 0 0.33 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 6 1 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::467 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 467 CLLE 0.88 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52712 467 female alive C91.1 no treatment 56 4786 4786 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Lymph-CLL CLLE ES 1 157.43 CLLE-ES::473 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 6 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.08 NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 14 106330472 106349770 1 1 4 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 0.02 0 99.08 0 2 NA Whitelist CLLE-ES 0.62 0.3 NA NA 0.59 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 22 27854005 30897262 1 1 4 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 0.02 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.16 NA NA 0.59 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::473 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 473 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52713 473 female alive C91.1 no treatment 50 9075 9075 Current reformed smoker for > 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 298.52 CLLE-ES::477 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 2 89161075 89291928 2 2 7 1 0 0 1 0 0.57 0.11 3 NA 0 NA NA NA NA NA NA 5 0.05 99.86 0 2 1 Whitelist CLLE-ES 0.68 0.29 NA 0 0.64 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 14 106329452 107169933 1 2 7 2 0 0 0 0 0.11 0 4 0 0 4 4 4 5 5 5 5 0.4 84.47 0 1 2 Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 22 23135467 23241799 1 1 7 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 5 0.21 76.01 0 1 2 Whitelist CLLE-ES 0.62 0.23 NA NA 0.59 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::477 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 477 CLLE 0.99 1.97 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7196 477 male alive C91.1 no treatment 74 4665 4665 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 153.45 CLLE-ES::48 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 2 89132286 89160439 1 1 17 1 0 0 0 0 0.39 0.65 1 NA NA NA NA NA 4 4 4 7.81 4.25 95.65 0 1 NA Whitelist CLLE-ES 0.62 0.86 NA NA 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 2 0.06 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 3 NA NA 0 0 17 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 0 NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 6 62413003 62480202 1 1 17 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.81 0 99.85 0 2 NA Whitelist CLLE-ES 0.62 1 NA NA 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 2 0.06 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 7 133015360 133045966 1 1 17 0 1 0 0 0 0.39 0.61 2 NA NA NA NA NA 5 3 3 7.81 0.34 99.43 0 2 3 Whitelist CLLE-ES 0.62 0.82 NA NA 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 2 0.06 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 9 129621853 132554329 1 1 17 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 7.81 0 99.3 0 2 NA Whitelist CLLE-ES 0.62 0.02 NA NA 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 2 0.06 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 14 106329465 106586136 1 2 17 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 7.81 0 99.29 0 2 NA Whitelist CLLE-ES 0.54 0.01 0 0 0.48 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 4 0.12 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 15 42432289 65833672 1 4 17 0 0 0 1 3 0.39 0 1 NA 0 NA NA NA NA NA NA 7.81 0 100 0 2 NA Whitelist CLLE-ES 0.54 0.01 NA 0 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 5 0.15 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 16 NA NA 0 0 17 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.22 NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 17 42486287 42510354 1 1 17 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 7.81 0.03 99.97 0 2 4 Whitelist CLLE-ES 0.62 0.62 NA NA 0.59 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 2 0.06 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::48 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 48 CLLE 0.72 1.96 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6418 48 male deceased C91.1 other therapy unknown 62 2057 2057 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 67.66 CLLE-ES::5 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 2 89132282 89291926 1 2 6 1 1 0 0 0 0.57 0.08 3 NA 0 NA NA NA 5 3 5 9.36 0.2 96.75 0 1 3 Whitelist CLLE-ES 0.68 0.24 NA 0 0.64 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 4 0.33 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 12 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.11 NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 14 106329457 107169931 2 2 6 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 9.36 0.78 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.06 NA 0 0.48 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 4 0.33 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::5 X NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.12 NA NA NA 0 No CLLE-ES 5 CLLE 0.87 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6354 5 male alive C91.1 other therapy unknown 46 4473 4473 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 147.14 CLLE-ES::519 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 6 25045944 58199512 1 1 10 0 0 0 1 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 0.16 0 99.85 0 2 NA Whitelist CLLE-ES 0.62 0.71 NA NA 0.59 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 2 0.1 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 9 NA NA 0 0 10 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.58 NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 14 106330461 106350735 1 1 10 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 0.16 1.8 95.16 0 0 2 Whitelist CLLE-ES 0.62 0.02 NA NA 0.59 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 2 0.1 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 16 NA NA 0 0 10 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.1 NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 20 NA NA 0 0 10 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.01 NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 21 NA NA 0 0 10 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.3 NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 22 22677323 23241802 2 2 10 2 0 0 0 0 0.11 0.01 3 NA 0 NA NA NA 4 0 3 0.16 1.1 98.9 0 0 1 Whitelist CLLE-ES 0.54 0.03 NA 0 0.48 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 4 0.2 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::519 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 519 CLLE 0.98 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52714 519 female alive C91.1 no treatment 70 3808 3808 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 125.26 CLLE-ES::523 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.48 NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 13 46862217 81119444 1 2 5 1 0 0 1 0 0.57 0.01 4 NA 0 4 3 4 5 3 3 1.12 29.74 70.26 0 1 0 Whitelist CLLE-ES 0.68 0.05 NA 0 0.64 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 14 106330470 106382689 1 1 5 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 1.12 0.58 96.3 1 0 2 Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::523 X 65686127 65740824 1 1 5 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 1.12 0.04 99.75 0 2 3 Whitelist CLLE-ES 0.62 0.46 NA NA 0.59 0 No CLLE-ES 523 CLLE 0.98 1.99 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO7214 523 female alive C91.1 chemotherapy unknown 71 3985 3985 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Lymph-CLL CLLE ES 1 131.09 CLLE-ES::56 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 2 57614456 65429110 2 2 4 0 2 0 0 0 0.11 0 4 0 0 4 0 3 6 3 3 0.24 3.02 96.88 0 2 3 Whitelist CLLE-ES 0.54 0.01 0 0 0.48 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 4 0.5 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 14 106329475 106376271 1 1 4 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 0.24 0.04 99.05 0 0 NA Whitelist CLLE-ES 0.62 0.3 NA NA 0.59 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::56 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 56 CLLE 0.97 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6428 56 female deceased C91.1 chemotherapy unknown 78 2483 2483 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 81.68 CLLE-ES::577 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 6 82947053 144774182 1 1 6 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 1.99 36.13 63.72 0 1 2 Whitelist CLLE-ES 0.62 0.56 NA NA 0.59 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 2 0.17 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 13 50623395 50659892 1 1 6 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 1.99 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.41 NA NA 0.59 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 2 0.17 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 14 106330471 106350730 1 1 6 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 1.99 0 99.07 0 2 NA Whitelist CLLE-ES 0.62 0 0 NA 0.59 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 2 0.17 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 22 18955019 20258736 1 1 6 0 0 0 1 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 1.99 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 2 0.17 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::577 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 577 CLLE 0.94 1.98 Lymph-CLL NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:2 2 CLLE-ES DO52716 577 female alive C91.1 other therapy unknown 61 1310 1310 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 43.09 CLLE-ES::58 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 2 89132286 89416835 1 1 5 1 0 0 0 0 0.39 0.36 3 NA NA NA NA NA 6 3 3 5.7 0.15 97.07 0 0 2 Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 9 78042097 78193976 1 1 5 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 5.7 0 99.29 0 2 NA Whitelist CLLE-ES 0.62 0.4 NA NA 0.59 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 11 94959828 115972587 1 1 5 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 5.7 15.56 84 0 1 2 Whitelist CLLE-ES 0.62 0.44 NA NA 0.59 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 13 50020561 51201357 1 1 5 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 5.7 1.03 98.97 0 1 2 Whitelist CLLE-ES 0.62 0.37 NA NA 0.59 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 14 106330469 107062127 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 5.7 0.82 99.05 0 1 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::58 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 58 CLLE 0.89 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52698 58 male alive C91.1 other therapy unknown 49 2018 2018 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 66.38 CLLE-ES::594 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 2 89132285 89495567 1 3 11 3 0 0 0 0 0.03 0.06 2 0 0 NA NA NA NA NA NA 0.16 0.15 99.76 0 1 2 Whitelist CLLE-ES 0.41 0.18 0 0 0.33 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 6 0.27 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 7 25904011 26802436 2 4 11 0 0 0 2 2 0.11 0 3 0 0 NA NA NA 5 5 5 0.16 0.53 99.24 0 2 1 Whitelist CLLE-ES 0.68 0 0 0 0.48 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 6 0.27 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 13 50422991 51450594 1 1 11 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 3 3 0.16 1.82 98.18 0 0 1 Whitelist CLLE-ES 0.62 0.03 NA NA 0.59 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 2 0.09 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 14 106329450 106791008 1 1 11 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 0.16 0.43 99.05 1 1 NA Whitelist CLLE-ES 0.62 0.54 NA NA 0.59 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 2 0.09 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 17 7163262 7575985 1 1 11 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 0.16 0.51 99.49 0 1 2 Whitelist CLLE-ES 0.62 0.5 NA NA 0.59 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 2 0.09 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::594 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 594 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52717 594 female deceased C91.1 chemotherapy unknown 71 2373 2373 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 78.06 CLLE-ES::6 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.61 NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 11 78240937 116776678 1 1 6 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 1.23 28.54 71.02 0 1 2 Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 13 48927800 50661829 1 1 6 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 1.23 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.41 NA NA 0.59 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 14 106331665 106373062 1 2 6 2 0 0 0 0 0.11 0.01 3 NA 0 NA NA NA NA NA NA 1.23 0 99.09 0 2 1 Whitelist CLLE-ES 0.54 0.06 NA 0 0.48 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 4 0.33 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 19 NA NA 0 0 6 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.29 NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 22 23040906 23260337 1 1 6 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 1.23 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::6 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 6 CLLE 0.96 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6898 6 female deceased C91.1 chemotherapy unknown 76 1038 1038 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 34.14 CLLE-ES::628 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 2 NA NA 0 0 6 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.66 NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 4 131594054 133965266 1 1 6 0 0 0 1 0 0.39 0.34 3 NA NA NA NA NA 5 5 5 5.17 1.11 98.86 0 2 1 Whitelist CLLE-ES 0.62 0.59 NA NA 0.59 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 14 106349761 106552283 1 1 6 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 5.17 0.21 99.05 0 1 NA Whitelist CLLE-ES 0.62 0 NA NA 0.59 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 18 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.05 NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 22 23040953 23263576 1 1 6 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 5.17 1.15 98.85 0 2 NA Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::628 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 628 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52718 628 male alive C91.1 chemotherapy unknown 40 3087 3087 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 101.55 CLLE-ES::63 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 11 106417596 116153393 2 2 5 0 0 1 1 0 0.57 0.02 4 NA 0 4 4 4 5 5 5 5.31 5.67 93.9 0 1 2 Whitelist CLLE-ES 0.68 0.08 NA 0 0.64 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 14 106330502 106552287 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 5.31 0 99.26 0 2 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::63 X 147727410 147738816 1 1 5 0 0 1 0 0 0.39 0.02 1 NA 0 NA NA NA NA NA NA 5.31 100 0 0 1 NA Whitelist CLLE-ES 0.62 0.09 NA 0 0.59 0 No CLLE-ES 63 CLLE 0.96 1.95 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO6430 63 male deceased C91.1 other therapy unknown 52 3650 3650 Current reformed smoker for <= 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 120.07 CLLE-ES::64 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.36 NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.32 NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 13 NA NA 0 0 3 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.27 NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 14 NA NA 0 0 3 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.25 NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 18 NA NA 0 0 3 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.22 NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::64 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 64 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6432 64 male alive C91.1 other therapy unknown 65 3787 3787 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 124.57 CLLE-ES::654 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 2 89132276 89162694 2 2 10 2 0 0 0 0 0.11 0.2 1 NA 0 NA NA NA NA NA NA 13.67 0 97.31 0 2 NA Whitelist CLLE-ES 0.54 0.43 NA 0 0.48 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 4 0.2 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 3 NA NA 0 0 10 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.76 NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 5 NA NA 0 0 10 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.32 NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 12 NA NA 0 0 10 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.22 NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 13 29262314 52035639 3 4 10 0 0 2 1 1 0.3 0 3 0 0 NA NA NA NA NA NA 13.67 1.58 98.42 0 2 1 Whitelist CLLE-ES 0.68 0 0 0 0.59 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 7 0.35 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 14 106211510 107169932 1 2 10 2 0 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 13.67 0.79 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.13 NA 0 0.48 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 4 0.2 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::654 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 654 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO7280 654 male alive C91.1 chemotherapy unknown 51 2369 2369 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 77.93 CLLE-ES::661 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 11 90314159 115956802 3 6 9 1 0 1 1 3 0.8 0 8 0 0 8 8 8 9 9 9 6.4 6.5 93.06 0 1 2 Whitelist CLLE-ES 0.62 0 0 0 0.84 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 9 0.5 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 14 106329465 106382692 1 1 9 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 6.4 0 99.1 0 2 NA Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 21 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 22 23154776 23247169 1 1 9 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 6.4 0.18 99.82 0 1 2 Whitelist CLLE-ES 0.62 0.27 NA NA 0.59 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 2 0.11 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::661 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 661 CLLE 0.95 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52719 661 male alive C91.1 chemotherapy unknown 53 3574 3574 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.57 CLLE-ES::677 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 6 392478 74230193 1 2 5 0 0 1 1 0 0.57 0.03 1 NA 0.04 NA NA NA NA NA NA 3.37 0.1 99.76 0 2 NA Whitelist CLLE-ES 0.68 0.12 NA 0.04 0.64 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 14 106176043 106326387 1 1 5 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 3.37 0.22 99.78 0 0 2 Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 15 79220764 79234073 1 1 5 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 3.37 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::677 X 28975284 155163594 1 1 5 0 0 1 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 3.37 18.66 81.27 0 2 NA Whitelist CLLE-ES 0.62 0.46 NA NA 0.59 0 No CLLE-ES 677 CLLE 0.96 2.02 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO52720 677 female alive C91.1 other therapy unknown 61 3034 3034 Current reformed smoker for <= 15 years NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 99.8 CLLE-ES::684 1 95923460 95953372 1 1 3 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 5.48 0 100 0 2 NA Whitelist CLLE-ES 0.62 0.07 NA NA 0.59 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 15 NA NA 0 0 3 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.23 NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 22 22677318 23247173 1 1 3 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 5.48 0.06 99.94 0 1 2 Whitelist CLLE-ES 0.62 0.13 NA NA 0.59 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 2 0.33 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::684 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 684 CLLE 0.86 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7304 684 male alive C91.1 other therapy unknown 59 2113 2113 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 69.51 CLLE-ES::723 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 2 89132282 89533665 2 2 5 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA NA NA NA 9.25 0 99.9 0 2 NA Whitelist CLLE-ES 0.54 0.03 0 0 0.48 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 4 0.4 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 14 106329506 107012938 2 2 5 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 9.25 0.64 96.26 0 0 2 Whitelist CLLE-ES 0.54 0.04 NA 0 0.48 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 4 0.4 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::723 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 723 CLLE 0.53 2.04 Lymph-CLL NA 0 0 NA 4 CLLE-ES DO6742 723 male alive C91.1 chemotherapy unknown 62 5042 5042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 165.86 CLLE-ES::749 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 6 5113706 90449869 1 2 5 1 0 1 0 0 0.57 0.03 2 NA 0 NA NA NA NA NA NA 7.74 50 49.84 0 1 2 Whitelist CLLE-ES 0.68 0.12 NA 0 0.64 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 7 99816115 99943157 1 1 5 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 7.74 0 99.77 0 2 NA Whitelist CLLE-ES 0.62 0.48 NA NA 0.59 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 14 106330517 107210931 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 7.74 0.82 84.05 0 0 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 2 0.2 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::749 X NA NA 0 0 5 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.46 NA NA NA 0 No CLLE-ES 749 CLLE 0.99 1.92 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO7328 749 male C91.1 other therapy unknown 45 1828 1828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 60.13 CLLE-ES::761 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 11 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.39 NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 14 106330842 106382703 1 1 4 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 6.8 0.05 99.05 0 1 NA Whitelist CLLE-ES 0.62 0.03 NA NA 0.59 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 22 23011277 23241800 1 1 4 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 6.8 0.45 99.55 0 1 2 Whitelist CLLE-ES 0.62 0.16 NA NA 0.59 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::761 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 761 CLLE 0.97 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6748 761 male alive C91.1 other therapy unknown 66 3572 3572 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 117.5 CLLE-ES::783 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 2 89132286 89309479 1 1 7 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 0.52 0.12 99.78 0 2 NA Whitelist CLLE-ES 0.62 0.7 NA NA 0.59 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 7 NA NA 0 0 7 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.16 NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 13 28924432 75835830 3 5 7 2 1 0 0 2 0.3 0 4 0 0 4 0 3 4 0 3 0.52 1.21 98.79 0 2 0 Whitelist CLLE-ES 0.68 0 0 0 0.59 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 8 0.57 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 22 22759051 23260345 1 1 7 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 4 3 4 0.52 24.76 64.13 0 0 2 Whitelist CLLE-ES 0.62 0.23 NA NA 0.59 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::783 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 783 CLLE 0.99 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO51992 783 female alive C91.1 other therapy unknown 42 4788 4788 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 157.5 CLLE-ES::785 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 2 89132281 89197303 2 2 6 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA NA NA NA 5.37 0.17 99.72 0 0 2 Whitelist CLLE-ES 0.68 0.05 0 0 0.64 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 4 0.33 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 10 39095490 39126972 1 1 6 0 0 0 1 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 5.37 0 99.76 0 2 NA Whitelist CLLE-ES 0.62 0.49 NA NA 0.59 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 14 106330524 106405610 1 1 6 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 5.37 0 99.12 0 2 NA Whitelist CLLE-ES 0.62 0.39 NA NA 0.59 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 22 23029738 23235965 1 1 6 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 6 3 3 5.37 24.67 64.22 0 1 2 Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::785 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 785 CLLE 0.72 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6754 785 male C91.1 no treatment 40 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 8.03 CLLE-ES::795 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 2 89160770 89291932 2 2 5 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 5 3 5 4.95 0.07 99.84 0 2 0 Whitelist CLLE-ES 0.54 0.03 0 0 0.48 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 14 106330070 106518399 2 2 5 2 0 0 0 0 0.11 0.01 1 NA 0 NA NA NA NA NA NA 4.95 0 99.23 0 2 NA Whitelist CLLE-ES 0.54 0.04 NA 0 0.48 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 4 0.4 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::795 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 795 CLLE 1 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52721 795 male alive C91.1 no treatment 73 1560 1560 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Lymph-CLL CLLE ES 1 51.32 CLLE-ES::802 1 NA NA 0 0 7 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.26 NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 2 89132285 89159124 1 1 7 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 1.25 0.17 96.76 0 1 NA Whitelist CLLE-ES 0.62 0.7 NA NA 0.59 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 4 153206459 153929920 1 1 7 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 1.25 0.38 99.61 0 1 2 Whitelist CLLE-ES 0.62 0.22 NA NA 0.59 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 6 36420679 36732787 1 1 7 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 1.25 0.18 99.67 0 1 2 Whitelist CLLE-ES 0.62 0.6 NA NA 0.59 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 2 0.14 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 14 106330509 107169934 2 2 7 2 0 0 0 0 0.11 0.02 1 NA 0 NA NA NA NA NA NA 1.25 35.31 64.52 0 1 NA Whitelist CLLE-ES 0.54 0.08 NA 0 0.48 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 4 0.29 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 20 NA NA 0 0 7 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.34 NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::802 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 802 CLLE 0.97 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52722 802 female alive C91.1 chemotherapy unknown 82 1729 1729 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 56.88 CLLE-ES::82 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 2 89159120 144325063 1 2 6 2 0 0 0 0 0.11 0.08 3 NA 0 NA NA NA NA NA NA 4.29 0.08 99.83 0 2 1 Whitelist CLLE-ES 0.54 0.24 NA 0 0.48 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 4 0.33 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 3 143105351 143255121 1 1 6 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 4.29 0.08 99.87 0 1 2 Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 2 0.17 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 6 62742309 62874300 1 1 6 1 0 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 4.29 0 99.85 0 2 NA Whitelist CLLE-ES 0.62 0.56 NA NA 0.59 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 2 0.17 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 14 106357570 106829582 1 1 6 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 4.29 0 99.52 0 2 NA Whitelist CLLE-ES 0.62 0.39 NA NA 0.59 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 2 0.17 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 22 23063638 23241799 1 1 6 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 4.29 0.35 99.65 0 1 2 Whitelist CLLE-ES 0.62 0.21 NA NA 0.59 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 2 0.17 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::82 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 82 CLLE 0.98 2.04 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO6434 82 female deceased C91.1 other therapy unknown 45 3407 3407 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 112.07 CLLE-ES::824 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 2 89161432 89246818 1 1 5 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 9.25 0 99.9 0 2 NA Whitelist CLLE-ES 0.62 0.61 NA NA 0.59 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 2 0.2 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 6 NA NA 0 0 5 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.51 NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 14 106329457 107218676 2 2 5 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 9.25 1.02 98.86 0 0 1 Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 4 0.4 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::824 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 824 CLLE 0.97 1.97 Lymph-CLL NA 0 0 NA 3 CLLE-ES DO52724 824 male deceased C91.1 chemotherapy unknown 84 84 84 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 2.76 CLLE-ES::83 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 9 77078981 82542126 1 1 4 0 0 0 1 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 0.86 6.32 92.98 0 2 NA Whitelist CLLE-ES 0.62 0.35 NA NA 0.59 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 13 47930555 65228905 1 1 4 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 0.86 15.02 84.98 0 1 2 Whitelist CLLE-ES 0.62 0.32 NA NA 0.59 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 14 106328572 107218670 2 2 4 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 0.86 0.83 99.05 0 1 2 Whitelist CLLE-ES 0.54 0.03 NA 0 0.48 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 4 0.5 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::83 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 83 CLLE 0.95 1.99 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6436 83 female deceased C91.1 other therapy unknown 55 1927 1927 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 63.39 CLLE-ES::832 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 2 89160768 89246824 1 1 6 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA 5 5 5 0.12 0.1 99.8 0 1 2 Whitelist CLLE-ES 0.62 0.66 NA NA 0.59 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.49 NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 13 49477392 52460076 1 1 6 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 0.12 2.59 97.3 0 1 2 Whitelist CLLE-ES 0.62 0.41 NA NA 0.59 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 2 0.17 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 14 106329512 106494135 2 2 6 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 0.12 0.15 99.05 0 1 2 Whitelist CLLE-ES 0.54 0 0 0 0.48 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 4 0.33 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::832 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 832 CLLE 0.94 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52725 832 female alive C91.1 no treatment 70 3285 3285 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 108.06 CLLE-ES::84 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 14 NA NA 0 0 1 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.12 NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::84 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 84 CLLE 0.54 1.93 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO52699 84 male alive C91.1 chemotherapy unknown 65 6277 6277 Current reformed smoker for > 15 years NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 206.48 CLLE-ES::90 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 3 NA NA 0 0 4 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0.1 NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 6 32633392 32730238 1 1 4 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 0.09 0 99.85 0 2 NA Whitelist CLLE-ES 0.62 0.45 NA NA 0.59 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 2 0.25 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 14 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA 0 NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CLLE-ES::90 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CLLE-ES NA NA NA NA NA 0 No CLLE-ES 90 CLLE 0.95 2 Lymph-CLL NA 0 0 NA 2 CLLE-ES DO6438 90 female alive C91.1 other therapy unknown 57 4277 4277 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Lymph-CLL CLLE ES 1 140.69 CMDI-UK::CGP_donor_1338119 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338119 X NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.16 NA NA NA 0 No CMDI-UK CGP_donor_1338119 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52744 CGP_donor_1338119 female alive D45 other therapy stable disease 54 NA 4383 NA Included Myeloid-MPN CMDI UK 0 144.18 CMDI-UK::CGP_donor_1338650 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 13 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.02 NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 21 36174715 36399879 1 2 3 1 0 0 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 0 0 77.35 0 2 NA Whitelist CMDI-UK 0.68 0 NA NA 0.59 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 3 0.5 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1338650 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1338650 CMDI NA NA Myeloid-MDS NA 0 0 NA 2 CMDI-UK DO52747 CGP_donor_1338650 female deceased C92.00 chemotherapy disease progression 74 365 365 NA Included Myeloid-MDS CMDI UK 1 12.01 CMDI-UK::CGP_donor_1364416 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 12 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.16 NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364416 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364416 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52751 CGP_donor_1364416 male deceased C92.00 chemotherapy stable disease 70 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1364432 1 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 2 NA NA 0 0 68 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.31 NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 3 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 4 41934184 132122432 4 10 68 2 1 1 0 6 0.57 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.76 0 2 NA Whitelist CMDI-UK 0.86 0 0 0 0.64 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 14 0.1 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 5 174618655 177220965 2 8 68 2 0 0 0 6 0.11 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.88 0 2 NA Whitelist CMDI-UK 0.62 0.01 0 0 0.48 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 10 0.07 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 6 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 7 54577864 117424983 16 21 68 7 2 4 3 5 0.32 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.97 0 2 NA Whitelist CMDI-UK 0.66 0 0 0 0.59 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 37 0.27 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 8 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 9 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 10 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 11 NA NA 0 0 68 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.93 NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 12 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 13 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 14 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 16 NA NA 0 0 68 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.28 NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 17 5925451 9316471 1 5 68 0 1 0 1 3 0.57 0 1 0 0 NA NA NA NA NA NA 4.95 0.05 99.93 0 2 NA Whitelist CMDI-UK 0.93 0 0 0 0.64 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 7 0.05 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 18 NA NA 0 0 68 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0 0 NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 19 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 1 NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 20 34539457 34578468 1 2 68 0 0 1 0 1 0.39 0 1 0 NA NA NA NA NA NA NA 4.95 0 99.87 0 2 NA Whitelist CMDI-UK 0.68 0 0 NA 0.59 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 3 0.02 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364432 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364432 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52752 CGP_donor_1364432 male deceased D46 other therapy stable disease 50 5113 5113 NA Included Myeloid-MPN CMDI UK 1 168.19 CMDI-UK::CGP_donor_1364444 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 20 33873189 50771132 1 1 1 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 0.55 26.81 72.64 0 1 2 Whitelist CMDI-UK 0.62 0.09 NA NA 0.59 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 2 1 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1364444 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1364444 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52753 CGP_donor_1364444 female alive D75.81 other therapy stable disease 45 NA 5113 NA Included Myeloid-MPN CMDI UK 0 168.19 CMDI-UK::CGP_donor_1405314 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 12 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.05 NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 13 49643624 50734537 1 1 4 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 0.4 0 100 0 2 NA Whitelist CMDI-UK 0.62 0.32 NA NA 0.59 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 2 0.25 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1405314 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.41 NA NA NA 0 No CMDI-UK CGP_donor_1405314 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52758 CGP_donor_1405314 female alive D45 other therapy stable disease 59 NA 4748 NA Included Myeloid-MPN CMDI UK 0 156.18 CMDI-UK::CGP_donor_1500979 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 2 NA NA 0 0 3 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.08 NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.36 NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1500979 X NA NA 0 0 3 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA 0.04 NA NA NA 0 No CMDI-UK CGP_donor_1500979 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52763 CGP_donor_1500979 male deceased D47.3 other therapy stable disease 59 4748 4748 NA Included Myeloid-MPN CMDI UK 1 156.18 CMDI-UK::CGP_donor_1605283 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 12 121690063 122989898 1 1 1 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 0 0 99.92 0 2 NA Whitelist CMDI-UK 0.62 0.16 NA NA 0.59 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 2 1 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 CMDI-UK::CGP_donor_1605283 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist CMDI-UK NA NA NA NA NA 0 No CMDI-UK CGP_donor_1605283 CMDI NA NA Myeloid-MPN NA 0 0 NA 2 CMDI-UK DO52733 CGP_donor_1605283 female alive D75.81 chemotherapy stable disease 53 NA 4018 NA Included Myeloid-MPN CMDI UK 0 132.17 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 3 5567528 60232262 1 2 7 2 0 0 0 0 0.11 0.08 3 NA 0.02 NA NA NA NA NA NA 4.98 0.22 99.6 0 2 1 Whitelist COAD-US 0.54 0.23 NA 0.02 0.48 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 4 0.29 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 6 148032580 148045933 1 1 7 0 1 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 4.98 0 99.85 0 2 NA Whitelist COAD-US 0.62 0.6 NA NA 0.59 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 2 0.14 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 7 137519325 137593601 1 1 7 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 4.98 0.05 99.73 0 1 2 Whitelist COAD-US 0.62 0.57 NA NA 0.59 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 2 0.14 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 10 65293496 65349829 1 1 7 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 4.98 0.04 99.84 0 1 2 Whitelist COAD-US 0.62 0.52 NA NA 0.59 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 2 0.14 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 11 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.53 NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 16 6506216 6873955 1 1 7 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 4.98 0.41 99.58 0 1 2 Whitelist COAD-US 0.62 0.39 NA NA 0.59 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 2 0.14 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 COAD 0.82 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7822 TCGA-AA-A01V 0cb0dac8-4ce2-444a-b1ae-1550e065b4d9 male alive C18.0 59 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 1 NA NA 0 0 46 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 0 NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 2 142304523 142331405 1 1 46 1 0 0 0 0 0.39 1 1 0.01 NA NA NA NA NA NA NA 4.98 0 99.91 0 2 NA Whitelist COAD-US 0.62 1 0.01 NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 3 60293480 60529896 2 2 46 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 5 5 5 4.98 0.14 99.83 0 1 2 Whitelist COAD-US 0.54 0 0 0 0.48 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 4 NA NA 0 0 46 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.62 NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 5 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 6 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 7 NA NA 0 0 46 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.76 NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 8 126283439 126343672 1 1 46 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 4.98 0 99.9 0 2 NA Whitelist COAD-US 0.62 0.91 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 9 113736847 113866392 1 1 46 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 4.98 0 99.87 0 2 NA Whitelist COAD-US 0.62 0.9 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 10 71966946 72092833 1 1 46 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 4.98 0.09 99.71 0 2 4 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 11 45238577 48455214 1 1 46 0 0 1 0 0 0.39 0.02 1 0 0 NA NA NA NA NA NA 4.98 0 99.57 0 2 NA Whitelist COAD-US 0.62 0.08 0 0 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 12 82885219 82899639 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.98 0 99.92 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 14 106007121 106025120 1 1 46 0 0 1 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 4.98 0.41 83.67 0 1 NA Whitelist COAD-US 0.62 0.86 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 15 NA NA 0 0 46 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.33 0 NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 16 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 17 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 18 36984271 37047248 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.98 0 99.93 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 20 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::268c01b3-d2ce-44c0-a2fe-ea846a1253cc X 7015189 7091953 1 1 46 1 0 0 0 0 0.39 0.5 1 0.01 NA NA NA NA NA NA NA 4.98 100 0 0 1 NA Whitelist COAD-US 0.62 0.75 0.01 NA 0.59 0 No COAD-US 268c01b3-d2ce-44c0-a2fe-ea846a1253cc COAD 0.41 1.93 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8264 TCGA-CA-6717 268c01b3-d2ce-44c0-a2fe-ea846a1253cc male alive C18.2 57 NA 10 NA Included ColoRect-AdenoCA COAD US 0 0.33 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 5 91100838 91150408 1 1 5 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 58.25 99.86 0 0 3 NA Whitelist COAD-US 0.62 0.52 NA NA 0.59 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 2 0.2 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 11 2148277 26265459 1 3 5 2 1 0 0 0 0.3 0 2 0.01 0 NA NA NA NA NA NA 58.25 99.57 0 0 3 5 Whitelist COAD-US 0.62 0.01 0.01 0 0.59 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 6 0.6 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 18 71128937 71174798 1 1 5 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 58.25 0.06 99.91 0 1 2 Whitelist COAD-US 0.62 0.32 NA NA 0.59 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 2 0.2 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::2e386e48-b99b-4806-a3e3-081d72a606e7 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 2e386e48-b99b-4806-a3e3-081d72a606e7 COAD 0.64 2.86 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO8004 TCGA-AA-A01X 2e386e48-b99b-4806-a3e3-081d72a606e7 female alive C18.7 80 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 1 NA NA 0 0 51 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.95 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 2 76213768 161992524 1 3 51 0 0 1 1 1 0.57 0.32 1 0 0 NA NA NA NA NA NA 22.07 99.9 0 0 3 NA Whitelist COAD-US 0.62 0.57 0 0 0.64 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 5 0.05 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 3 168948005 169175983 1 1 51 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 22.07 0.12 99.74 0 1 2 Whitelist COAD-US 0.62 0.81 NA NA 0.59 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 4 94012474 136381345 3 10 51 0 1 2 3 4 0.34 0 8 0 0 8 8 8 11 11 11 22.07 3.45 96.53 0 1 2 Whitelist COAD-US 0.68 0 0 0 0.59 1 High confidence COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA Canonical without polyploidization 16 0.16 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 5 118194133 135497452 2 2 51 0 0 1 1 0 0.57 0.56 2 0 0 NA NA NA 5 3 3 22.07 9.65 87.69 0 1 2 Whitelist COAD-US 0.68 0.79 0 0 0.64 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 6 127429647 128806270 2 2 51 0 0 1 1 0 0.57 0.77 1 NA 0 NA NA NA NA NA NA 22.07 0 99.87 0 2 NA Whitelist COAD-US 0.68 0.93 NA 0 0.64 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 7 NA NA 0 0 51 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.61 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 8 121372092 124496228 1 5 51 1 0 0 0 4 0.39 0.01 2 0 0 NA NA NA NA NA NA 22.07 97.86 2.13 0 2 3 Whitelist COAD-US 4 0.93 0.06 0 0 0.59 1 Linked to high confidence COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA With other complex events 6 0.06 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 10 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 11 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 12 NA NA 0 0 51 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.55 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 13 23484992 80862667 1 1 51 0 1 0 0 0 0.39 0.7 2 NA 0 NA NA NA NA NA NA 22.07 49.82 50.18 0 2 3 Whitelist COAD-US 0.62 0.89 NA 0 0.59 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 15 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 16 6482808 7103914 6 6 51 6 0 0 0 0 0 0 7 0 0 7 4 7 8 4 7 22.07 0.62 99.28 0 1 0 Whitelist COAD-US 0.04 0 0 0 0.03 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 12 0.12 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 17 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 18 13779820 20550689 2 2 51 0 0 1 1 0 0.57 0.16 4 0 0 4 4 4 5 5 5 22.07 92.05 2.84 0 1 2 Whitelist COAD-US 0.68 0.36 0 0 0.64 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 19 57792967 58472190 2 2 51 0 0 1 1 0 0.57 0.27 1 NA 0 NA NA NA NA NA NA 22.07 0 98.72 0 2 NA Whitelist COAD-US 0.68 0.51 NA 0 0.64 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::300fff5a-0f61-402d-b845-3938ba7b1294 X 51723284 51757541 1 1 51 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 4 22.07 7.58 92.19 0 0 2 Whitelist COAD-US 0.62 0.76 NA NA 0.59 1 No COAD-US 300fff5a-0f61-402d-b845-3938ba7b1294 COAD 0.85 2.14 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577575_G_A,CN:1 2 COAD-US DO44093 TCGA-QG-A5YX 300fff5a-0f61-402d-b845-3938ba7b1294 female alive C18.7 61 NA 526 NA Included ColoRect-AdenoCA COAD US 0 17.3 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 1 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 2 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 3 4257198 60146256 1 3 45 1 2 0 0 0 0.3 0.24 4 0 0 4 3 4 5 3 3 4.98 0.15 99.75 10 2 3 Whitelist COAD-US 0.62 0.48 0 0 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 6 0.07 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 4 91967181 178461132 1 4 45 4 0 0 0 0 0.01 0.54 3 0 0 NA NA NA NA NA NA 4.98 0.15 99.67 45 2 1 Whitelist COAD-US 0.21 0.77 0 0 0.16 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 8 0.09 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 5 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 6 118282468 144900363 4 4 45 0 0 1 3 0 0.11 0 1 0 0 NA NA NA NA NA NA 4.98 0 99.85 9 2 NA Whitelist COAD-US 0.54 0.01 0 0 0.48 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 8 0.09 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 7 133256474 154204346 1 3 45 2 1 0 0 0 0.3 0.73 3 0 0 NA NA NA NA NA NA 4.98 0.09 99.68 10 2 3 Whitelist COAD-US 0.62 0.91 0 0 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 6 0.07 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 8 NA NA 0 0 45 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.74 NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 9 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 10 53055937 53237425 1 1 45 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 4.98 0 99.89 7 2 NA Whitelist COAD-US 0.62 0.71 NA NA 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 2 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 11 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 12 34070888 34289395 1 1 45 0 0 0 1 0 0.39 0.47 1 0 NA NA NA NA NA NA NA 4.98 0 99.92 5 2 NA Whitelist COAD-US 0.62 0.71 0 NA 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 2 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 13 49711229 79709199 1 4 45 0 0 1 1 2 0.57 0.02 1 0 0 NA NA NA NA NA NA 4.98 0 85.85 27 2 NA Whitelist COAD-US 0.68 0.08 0 0 0.64 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 6 0.07 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 14 67021108 67039041 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.98 0 84.08 3 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 2 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 16 78898135 79114576 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.98 0 99.62 1 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 2 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 17 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 18 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 19 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 20 14744317 15194874 2 2 45 2 0 0 0 0 0.11 0 5 0 0 5 3 5 5 3 3 4.98 0.57 98.47 1 1 2 Whitelist COAD-US 0.54 0 0 0 0.48 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 4 0.04 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a 22 NA NA 0 0 45 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.27 NA NA NA 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::33e989b9-fac4-47d8-b429-269044ac772a X 128089682 128354215 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.98 100 0 0 1 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 33e989b9-fac4-47d8-b429-269044ac772a COAD 0.73 1.93 ColoRect-AdenoCA NA 2 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578535_G_T,CN:2 2 COAD-US DO8730 TCGA-AA-3977 33e989b9-fac4-47d8-b429-269044ac772a male alive C18.7 65 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 4 156398170 156415490 1 2 6 0 0 1 1 0 0.57 0.06 1 NA 0 NA NA NA NA NA NA 0.03 0 99.99 1 2 NA Whitelist COAD-US 0.68 0.18 NA 0 0.64 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 4 0.33 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.51 NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 12 85044002 85069613 1 1 6 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 0.03 0 99.92 0 2 NA Whitelist COAD-US 0.62 0.49 NA NA 0.59 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 2 0.17 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 17 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.35 NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::36eaf209-c332-4321-b6aa-51a3368ecd79 X 112907895 113433363 1 1 6 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 0.03 0.34 99.44 4 1 2 Whitelist COAD-US 0.62 0.51 NA NA 0.59 0 No COAD-US 36eaf209-c332-4321-b6aa-51a3368ecd79 COAD 0.68 2 ColoRect-AdenoCA NA 2 0.17 NA 2 COAD-US DO8898 TCGA-AA-3555 36eaf209-c332-4321-b6aa-51a3368ecd79 female alive C18.9 81 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 1 51170831 227332840 1 4 95 3 0 0 0 1 0.03 0.7 5 0 0 5 3 4 6 3 4 95.59 99.94 0.04 0 5 2 Whitelist COAD-US 0.21 0.9 0 0 0.33 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 7 0.04 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 2 116052333 206458574 1 3 95 2 0 0 0 1 0.11 0.85 6 0 0 6 5 6 12 5 10 95.59 97.31 0 0 5 4 Whitelist COAD-US 0.62 0.99 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 5 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 3 174456069 174947101 2 2 95 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 15 4 5 95.59 96.35 0.5 0 3 2 Whitelist COAD-US 0.54 0.04 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 4 57067714 110769151 1 2 95 2 0 0 0 0 0.11 0.53 1 0 0 NA NA NA NA NA NA 95.59 99.98 0 0 3 NA Whitelist COAD-US 0.54 0.76 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 5 21173979 101479907 1 6 95 3 3 0 0 0 0.11 1 9 0 0 9 7 9 9 7 7 95.59 99.88 0 0 4 3 Whitelist COAD-US 0.54 1 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 12 0.06 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 6 1668579 162654632 1 2 95 1 0 0 1 0 0.57 0.52 11 0.01 0 11 5 5 11 5 5 95.59 99.85 0.01 0 4 3 Whitelist COAD-US 0.68 0.76 0.01 0 0.64 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 7 29124947 126777078 1 3 95 3 0 0 0 0 0.03 1 6 0 0 6 5 6 6 5 6 95.59 97.42 0 0 5 4 Whitelist COAD-US 0.41 1 0 0 0.33 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 6 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 8 15902287 16032528 1 1 95 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA 8 8 8 95.59 100 0 0 4 5 Whitelist COAD-US 0.62 0.96 0 NA 0.59 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 2 0.01 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 9 14260960 18788223 1 2 95 2 0 0 0 0 0.11 0.59 3 NA 0 NA NA NA 4 3 3 95.59 99.86 0 0 4 3 Whitelist COAD-US 0.54 0.81 NA 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 10 53445770 77673630 1 3 95 3 0 0 0 0 0.03 0.8 6 0 0 6 6 6 7 7 7 95.59 99.82 0 0 3 4 Whitelist COAD-US 0.41 0.95 0 0 0.33 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 6 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 11 NA NA 0 0 95 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 0 NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 12 NA NA 0 0 95 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.58 NA NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 13 35827495 87785665 1 4 95 3 1 0 0 0 0.11 0.57 6 0 0 6 3 4 8 3 3 95.59 97.22 0 0 5 9 Whitelist COAD-US 0.54 0.8 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 8 0.04 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 14 67176728 80179933 1 3 95 2 0 0 0 1 0.11 1 4 NA 0 4 4 4 5 5 5 95.59 98.49 0.59 0 2 3 Whitelist COAD-US 0.62 1 NA 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 5 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 15 25630528 32074737 1 2 95 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 95.59 100 0 0 4 3 Whitelist COAD-US 0.54 1 NA 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 16 78938135 79254967 1 1 95 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 95.59 99.3 0.35 0 2 3 Whitelist COAD-US 0.62 0.91 NA NA 0.59 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 2 0.01 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 17 NA NA 0 0 95 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 18 19675614 35300524 1 3 95 0 3 0 0 0 0.03 0.74 3 0 0 NA NA NA NA NA NA 95.59 99.96 0 0 3 4 Whitelist COAD-US 0.41 0.91 0 0 0.33 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 6 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 19 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 20 14685626 15047995 2 2 95 2 0 0 0 0 0.11 0 6 0 0 6 0 4 11 4 4 95.59 98.95 0 0 7 4 Whitelist COAD-US 0.54 0.02 0 0 0.48 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 4 0.02 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 21 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce 22 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 0 0 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::490eabca-4575-4bd6-9604-6b6e23d069ce X 93774738 149829809 1 3 95 3 0 0 0 0 0.03 0.81 6 0 0 6 6 6 9 9 9 95.59 99.63 0.14 0 2 3 Whitelist COAD-US 0.41 0.96 0 0 0.33 0 No COAD-US 490eabca-4575-4bd6-9604-6b6e23d069ce COAD 0.72 4.02 ColoRect-AdenoCA NA 6 0.03 NA 4 COAD-US DO44086 TCGA-NH-A50T 490eabca-4575-4bd6-9604-6b6e23d069ce female alive C18.5 68 NA 125 NA Included ColoRect-AdenoCA COAD US 0 4.11 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 1 49778532 49898693 2 2 322 2 0 0 0 0 0.11 0.15 3 0 0 NA NA NA 23 15 15 71.25 99.71 0.29 0 3 4 Whitelist COAD-US 0.54 0.35 0 0 0.48 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 2 154779992 213865954 1 3 322 3 0 0 0 0 0.03 0 6 0 0 6 6 6 10 10 10 71.25 99.91 0 0 3 4 Whitelist COAD-US 0.41 0 0 0 0.33 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 6 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 3 60846509 174947345 3 7 322 4 0 1 1 1 0.11 0.91 15 0 0 15 5 9 32 15 15 71.25 53.42 43.45 0 1 2 Whitelist COAD-US 0.62 1 0 0 0.48 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 13 0.02 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 4 91672511 91808621 2 2 322 2 0 0 0 0 0.11 0.18 3 0 0 NA NA NA 13 6 6 71.25 97.41 2.15 0 1 2 Whitelist COAD-US 0.54 0.4 0 0 0.48 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 5 94024388 119687637 2 4 322 0 0 1 1 2 0.57 0.05 8 0 0 8 4 6 34 7 10 71.25 72 27.87 0 4 2 Whitelist COAD-US 8 0.68 0.16 0 0 0.64 1 Linked to high confidence COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA With other complex events 6 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 6 162130895 163002630 3 3 322 1 0 1 1 0 0.8 0.1 6 0 0 6 5 6 17 6 6 71.25 90.15 9.71 0 2 1 Whitelist COAD-US 0.87 0.26 0 0 0.84 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 6 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 7 862136 133957567 1 9 322 8 1 0 0 0 0 0.38 18 0 0 18 7 8 21 7 8 71.25 99.71 0.08 2 3 4 Whitelist COAD-US 0.02 0.63 0 0 0.02 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 18 0.03 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 8 75252026 130197825 77 83 322 25 17 19 16 6 0.47 0 78 0 0 78 7 8 94 7 8 71.25 44.64 51.93 3 6 5 Whitelist COAD-US 0.71 0 0 0 0.64 1 High confidence COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA With other complex events 160 0.25 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 9 NA NA 0 0 322 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 0 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 10 3416561 47660152 15 27 322 5 5 3 2 12 0.61 0 22 0 0 22 18 20 32 18 20 71.25 90.21 9.61 1 3 2 Whitelist COAD-US 11 0.93 0 0 0 0.69 1 High confidence COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA Canonical without polyploidization 42 0.07 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 11 4624293 78623114 2 12 322 0 1 1 0 10 0.57 0.29 11 0 0 11 5 10 17 5 5 71.25 92.06 4.28 0 3 2 Whitelist COAD-US 10 1 0.53 0 0 0.64 1 Linked to high confidence COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA With other complex events 14 0.02 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 12 459013 3180422 3 4 322 2 1 0 0 1 0.3 0.23 4 0.09 0 4 0 3 13 5 5 71.25 3.83 96.15 0 4 5 Whitelist COAD-US 0.68 0.47 0.09 0 0.59 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 7 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 13 47918581 97905416 1 5 322 3 2 0 0 0 0.14 0.65 6 0 0 6 3 3 11 3 3 71.25 100 0 1 6 3 Whitelist COAD-US 0.62 0.86 0 0 0.59 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 10 0.02 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 14 54076607 60807129 2 2 322 1 0 0 1 0 0.57 0.26 4 0 0 4 3 4 9 5 5 71.25 6.49 74.7 1 1 2 Whitelist COAD-US 0.68 0.5 0 0 0.64 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 15 NA NA 0 0 322 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 0 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 16 6597632 83609083 1 6 322 2 0 0 1 3 0.3 0.49 9 0.02 0 9 5 9 12 5 5 71.25 85.62 14.28 0 3 2 Whitelist COAD-US 0.68 0.73 0.02 0 0.59 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 9 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 17 52580998 52593527 1 1 322 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 71.25 79.2 20.77 0 3 NA Whitelist COAD-US 0.62 0.18 NA NA 0.59 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 2 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 18 NA NA 0 0 322 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 0 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 19 8475496 27976857 19 21 322 6 2 5 6 2 0.52 0 18 0 0 18 5 7 25 5 7 71.25 62.22 29.4 2 3 2 Whitelist COAD-US 0.66 0 0 0 0.64 1 Low confidence COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA With other complex events 40 0.06 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 20 14554823 15328621 6 6 322 5 0 0 1 0 0.01 0.08 4 0 0 4 0 3 7 0 3 71.25 98.56 0.45 0 2 0 Whitelist COAD-US 0.25 0.22 0 0 0.19 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 12 0.02 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 21 17516044 17578210 1 1 322 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 4 4 4 71.25 69.87 7.48 0 2 3 Whitelist COAD-US 0.62 0.42 NA NA 0.59 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 2 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 22 NA NA 0 0 322 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 0 0 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::5116e3b4-2bac-40f5-8046-b9c1783faaa5 X 6909218 7046348 2 2 322 2 0 0 0 0 0.11 0.03 3 0 0 NA NA NA 7 7 7 71.25 99.74 0.03 0 3 2 Whitelist COAD-US 0.54 0.11 0 0 0.48 1 No COAD-US 5116e3b4-2bac-40f5-8046-b9c1783faaa5 COAD 0.5 3.09 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7577573_C_G,CN:2 2 COAD-US DO9034 TCGA-A6-3807 5116e3b4-2bac-40f5-8046-b9c1783faaa5 female alive C18.7 53 NA 333 NA Included ColoRect-AdenoCA COAD US 0 10.95 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 2 NA NA 0 0 7 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.01 0 NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 4 NA NA 0 0 7 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.04 NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 7 130312166 133119473 1 1 7 0 1 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 5.35 0 99.77 1 2 NA Whitelist COAD-US 0.62 0.57 NA NA 0.59 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 2 0.14 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 15 NA NA 0 0 7 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.4 NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::58facedb-fcb8-4ecf-8338-2bfa4947acef X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 58facedb-fcb8-4ecf-8338-2bfa4947acef COAD 0.17 1.94 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578475_A_G,CN:2 2 COAD-US DO10172 TCGA-A6-6141 58facedb-fcb8-4ecf-8338-2bfa4947acef male alive C18.9 31 NA 130 NA Included ColoRect-AdenoCA COAD US 0 4.28 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 1 49584156 49936583 3 3 68 3 0 0 0 0 0.03 0.65 5 0 0 5 3 5 7 4 4 5.99 0.09 99.59 0 1 2 Whitelist COAD-US 0.41 0.86 0 0 0.33 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 6 0.04 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 2 154859004 242768559 1 3 68 3 0 0 0 0 0.03 0.66 1 0 0 NA NA NA NA NA NA 5.99 0 99.9 0 2 NA Whitelist COAD-US 0.41 0.87 0 0 0.33 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 6 0.04 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 3 60042243 61131014 3 3 68 3 0 0 0 0 0.03 0.48 4 0 0 4 3 4 5 3 3 5.99 0.33 99.55 0 1 0 Whitelist COAD-US 0.41 0.72 0 0 0.33 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 6 0.04 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 4 91892863 92324663 2 2 68 2 0 0 0 0 0.11 0.22 1 0 0 NA NA NA NA NA NA 5.99 0.16 99.63 0 2 NA Whitelist COAD-US 0.54 0.45 0 0 0.48 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 4 0.03 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 5 104698029 133433277 1 1 68 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 5.99 15.88 83.99 0 1 2 Whitelist COAD-US 0.62 0.32 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 6 1784576 2142004 2 4 68 4 0 0 0 0 0.01 0.02 6 0.01 0 6 3 5 10 6 6 5.99 0.27 99.47 0 2 1 Whitelist COAD-US 0.21 0.08 0.01 0 0.16 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 8 0.06 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 7 3747192 110440994 1 6 68 1 1 0 0 4 0.57 0.18 4 0.02 0 4 3 4 5 3 3 5.99 0.13 99.85 0 2 0 Whitelist COAD-US 0.93 0.4 0.02 0.01 0.64 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 8 0.06 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 8 48794880 48849829 1 1 68 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 5.99 0 99.89 0 2 NA Whitelist COAD-US 0.62 1 0 NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 9 28642291 28777412 1 1 68 0 0 0 1 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 5.99 0 99.84 0 2 NA Whitelist COAD-US 0.62 0.76 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 10 126721633 126778308 1 1 68 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 5.99 0 99.9 0 2 NA Whitelist COAD-US 0.62 0.63 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 11 28129528 28168129 1 1 68 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 5.99 0.1 99.76 0 2 NA Whitelist COAD-US 0.62 0.63 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 12 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 13 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 14 99898349 100008819 1 2 68 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 5.99 0 100 0 2 NA Whitelist COAD-US 0.54 1 NA 0 0.48 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 4 0.03 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 15 NA NA 0 0 68 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.69 NA NA NA 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 16 78527712 79114268 1 3 68 3 0 0 0 0 0.03 0.11 3 0 0 NA NA NA NA NA NA 5.99 0.22 99.68 0 2 1 Whitelist COAD-US 0.41 0.28 0 0 0.33 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 6 0.04 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 17 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 18 36993761 37317309 2 2 68 2 0 0 0 0 0.11 0.11 3 0 0 NA NA NA 4 0 3 5.99 0.41 99.55 0 0 1 Whitelist COAD-US 0.54 0.28 0 0 0.48 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 4 0.03 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 19 39247715 39275679 1 1 68 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.99 0 99.83 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 20 14119709 15343908 2 4 68 4 0 0 0 0 0.01 0.06 4 0 0 4 3 4 5 3 3 5.99 1.94 97.94 0 1 0 Whitelist COAD-US 0.21 0.18 0 0 0.16 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 8 0.06 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 21 27444824 27504369 1 1 68 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 5.99 0 77.35 0 2 NA Whitelist COAD-US 0.62 0.43 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 22 49092543 49290728 1 1 68 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 5.99 0.39 99.61 0 2 3 Whitelist COAD-US 0.62 0.78 NA NA 0.59 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::5e7074a6-5011-4dc5-950c-41365dbc6d09 X 6970785 7040497 2 2 68 2 0 0 0 0 0.11 0.4 1 0.03 0 NA NA NA NA NA NA 5.99 100 0 0 1 NA Whitelist COAD-US 0.54 0.64 0.03 0 0.48 0 No COAD-US 5e7074a6-5011-4dc5-950c-41365dbc6d09 COAD 0.52 1.92 ColoRect-AdenoCA NA 4 0.03 NA 2 COAD-US DO8360 TCGA-AD-6964 5e7074a6-5011-4dc5-950c-41365dbc6d09 male alive C18.2 58 NA 23 NA Included ColoRect-AdenoCA COAD US 0 0.76 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 1 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 2 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 3 60236891 60689650 2 2 74 2 0 0 0 0 0.11 0.25 3 0 0 NA NA NA NA NA NA 23.79 0.21 99.65 0 2 1 Whitelist COAD-US 0.54 0.49 0 0 0.48 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 4 0.03 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 4 85661319 92273555 1 3 74 3 0 0 0 0 0.03 1 1 0 0 NA NA NA NA NA NA 23.79 0 99.8 0 2 NA Whitelist COAD-US 0.41 1 0 0 0.33 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 6 0.04 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 5 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 6 19279359 147813543 1 6 74 0 1 1 2 2 0.57 0.21 3 0 0 NA NA NA 4 3 3 23.79 0.25 99.61 0 2 3 Whitelist COAD-US 0.93 0.44 0 0 0.64 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 10 0.07 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 7 111066967 111117666 1 1 74 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 23.79 99.78 0 0 3 NA Whitelist COAD-US 0.62 0.41 NA NA 0.59 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 2 0.01 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 8 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 9 100741863 100763686 1 1 74 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 23.79 0 99.3 0 2 NA Whitelist COAD-US 0.62 0.62 NA NA 0.59 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 2 0.01 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 10 113906992 115863533 2 2 74 0 0 1 1 0 0.57 1 2 0 0 NA NA NA NA NA NA 23.79 1.44 98.38 0 1 2 Whitelist COAD-US 0.68 1 0 0 0.64 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 4 0.03 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 11 NA NA 0 0 74 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.51 NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 12 84909896 84995952 1 1 74 0 1 0 0 0 0.39 0.09 1 0 NA NA NA NA NA NA NA 23.79 99.92 0 0 3 NA Whitelist COAD-US 0.62 0.24 0 NA 0.59 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 2 0.01 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 13 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 14 89603801 104123000 1 2 74 0 1 0 1 0 0.57 0.51 1 NA 0 NA NA NA NA NA NA 23.79 99.08 0 0 3 NA Whitelist COAD-US 0.68 0.75 NA 0 0.64 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 4 0.03 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 15 NA NA 0 0 74 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.71 NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 16 6523949 6878894 3 3 74 1 0 1 1 0 0.8 0 4 0 0 4 3 4 9 4 4 23.79 0.58 99.41 0 1 0 Whitelist COAD-US 0.87 0.02 0 0 0.84 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 6 0.04 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 17 22158710 65973469 21 21 74 3 6 5 7 0 0.64 0 32 0 0 32 4 5 33 4 5 23.79 26.68 68.86 0 7 2 Whitelist COAD-US 0.76 0 0 0 0.72 0 Low confidence COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA With other complex events 42 0.28 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 18 230669 47446898 3 3 74 0 1 1 1 0 0.8 0.45 6 0 0 6 6 6 7 7 7 23.79 55.3 44.66 0 1 2 Whitelist COAD-US 0.87 0.7 0 0 0.84 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 6 0.04 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 19 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 20 14925418 14992549 2 2 74 2 0 0 0 0 0.11 0.08 2 0 0 NA NA NA 5 5 5 23.79 98.03 0.98 0 2 3 Whitelist COAD-US 0.54 0.22 0 0 0.48 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 4 0.03 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 21 NA NA 0 0 74 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.19 NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b 22 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::6fa41234-9077-4d05-a295-6820f3bedf5b X 96666879 96784614 1 1 74 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 23.79 0 100 0 2 NA Whitelist COAD-US 0.62 0.41 NA NA 0.59 0 No COAD-US 6fa41234-9077-4d05-a295-6820f3bedf5b COAD 0.8 2.22 ColoRect-AdenoCA NA 2 0.01 NA 3 COAD-US DO9226 TCGA-AA-A02O 6fa41234-9077-4d05-a295-6820f3bedf5b male alive C18.4 82 NA 28 NA Included ColoRect-AdenoCA COAD US 0 0.92 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 1 195368000 195449322 1 1 184 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 10 5 5 78.15 69.7 30.3 0 3 4 Whitelist COAD-US 0.62 0.08 0 NA 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 2 101918610 203298749 1 4 184 2 0 0 0 2 0.11 0.11 3 0 0 NA NA NA NA NA NA 78.15 99.9 0 0 3 2 Whitelist COAD-US 0.54 0.28 0 0 0.48 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 3 60666779 174956707 1 10 184 3 0 0 0 7 0.03 0.47 6 0 0 6 6 6 9 9 9 78.15 99.52 0.36 0 2 3 Whitelist COAD-US 7 0.62 0.72 0 0 0.33 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 13 0.04 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 4 91791647 91882101 1 1 184 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 8 3 3 78.15 3.81 93.81 0 1 2 Whitelist COAD-US 0.62 1 0 NA 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 5 103440638 103976533 1 1 184 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA NA NA NA 78.15 99.57 0.3 0 2 3 Whitelist COAD-US 0.62 0.61 0 NA 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 6 28351517 161800031 1 22 184 2 2 1 0 17 0.53 0 5 0 0 5 3 4 8 3 3 78.15 99.72 0.05 0 3 2 Whitelist COAD-US 10 0.94 0 0 0 0.64 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 27 0.07 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 7 11635445 117223039 1 7 184 3 1 0 0 3 0.11 0.87 15 0 0 15 6 8 16 6 8 78.15 97.35 0 0 3 4 Whitelist COAD-US 3 0.77 1 0 0 0.48 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 11 0.03 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 8 8750084 134010432 1 13 184 3 0 0 1 9 0.11 0.06 15 0 0 15 4 9 15 4 6 78.15 99.95 0.04 0 3 4 Whitelist COAD-US 0.68 0.2 0 0 0.48 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 17 0.05 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 9 22504763 27003841 1 2 184 1 0 1 0 0 0.57 0.7 3 0 0 NA NA NA 11 6 7 78.15 99.18 0.1 0 3 4 Whitelist COAD-US 0.68 0.9 0 0 0.64 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 10 19155794 74638780 1 4 184 2 0 0 0 2 0.11 0.37 6 0 0 6 6 6 10 7 7 78.15 51.46 48.38 0 2 3 Whitelist COAD-US 0.68 0.63 0 0 0.48 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 11 36286027 55106614 22 22 184 6 9 4 3 0 0.28 0 38 0 0 38 9 10 70 13 14 78.15 93.46 6.11 2 4 8 Whitelist COAD-US 0.62 0 0 0 0.59 1 High confidence COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA With other complex events 44 0.12 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 12 78680069 78844634 1 3 184 2 0 0 0 1 0.11 0.22 3 0 0 NA NA NA 6 4 4 78.15 59.07 40.84 0 3 2 Whitelist COAD-US 0.41 0.45 0 0 0.48 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 5 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 13 55933177 57042579 3 4 184 0 1 1 1 1 0.8 0 2 0 0 NA NA NA 19 7 7 78.15 99.36 0.51 0 3 7 Whitelist COAD-US 0.68 0 0 0 0.84 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 7 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 14 45431010 45507173 1 1 184 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 7 3 3 78.15 96.25 0.07 0 2 3 Whitelist COAD-US 0.62 0.64 NA NA 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 15 39567735 53848043 3 5 184 0 2 1 0 2 0.3 0 10 0 0 10 7 10 23 8 8 78.15 71.9 28 0 3 4 Whitelist COAD-US 0.68 0 0 0 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 8 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 16 NA NA 0 0 184 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.49 NA NA NA 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 17 7116453 8098462 2 2 184 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 6 3 3 78.15 95.12 0 3 3 1 Whitelist COAD-US 0.68 0.27 0 0 0.64 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 18 NA NA 0 0 184 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 19 NA NA 0 0 184 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist COAD-US NA 0.81 NA NA NA 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 20 14771323 61942268 1 8 184 5 0 0 0 3 0 0.02 15 0 0 15 5 7 16 5 5 78.15 92.35 0.54 0 2 7 Whitelist COAD-US 0.54 0.08 0 0 0.07 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 13 0.04 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 21 17754863 36079622 3 4 184 1 0 1 1 1 0.8 0 10 0 0 10 5 10 14 7 7 78.15 77.35 0 0 4 3 Whitelist COAD-US 0.68 0 0 0 0.84 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 7 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c 22 NA NA 0 0 184 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::74a0264d-1d31-430d-9a88-e7334c8aa96c X 64170238 64333158 3 3 184 2 1 0 0 0 0.3 0.4 1 0 0 NA NA NA NA NA NA 78.15 100 0 0 1 NA Whitelist COAD-US 0.62 0.64 0 0 0.59 1 No COAD-US 74a0264d-1d31-430d-9a88-e7334c8aa96c COAD 0.71 3.06 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7579575_-_G,CN:1 3 COAD-US DO44095 TCGA-A6-A56B 74a0264d-1d31-430d-9a88-e7334c8aa96c male alive C18.7 57 NA 1595 NA Included ColoRect-AdenoCA COAD US 0 52.47 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 1 49231568 49266844 1 1 45 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA 4 3 4 24.39 41.85 58.15 0 2 NA Whitelist COAD-US 0.62 0.5 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 2 142936021 142959054 1 1 45 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 24.39 0 99.89 0 2 NA Whitelist COAD-US 0.62 0.4 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 3 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 4 91405856 91575670 1 1 45 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 24.39 0.09 99.71 0 1 2 Whitelist COAD-US 0.62 0.93 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 5 81789290 147088091 1 5 45 2 1 1 1 0 0.9 0.06 6 0 0 6 5 6 7 5 5 24.39 34.04 65.82 0 2 3 Whitelist COAD-US 0.93 0.19 0 0 0.92 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 10 0.11 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 6 2047084 2160335 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.39 0.07 99.78 0 1 2 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 7 82590985 93085565 2 2 45 0 0 1 1 0 0.57 0.3 1 0 0 NA NA NA NA NA NA 24.39 99.69 0.07 0 3 NA Whitelist COAD-US 0.68 0.55 0 0 0.64 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 8 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 9 26715924 26761427 1 1 45 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 24.39 99.26 0.03 0 2 3 Whitelist COAD-US 0.62 0.89 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 10 53851313 53880031 1 1 45 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 24.39 0 99.89 0 2 NA Whitelist COAD-US 0.62 0.9 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 11 NA NA 0 0 45 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.9 NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 12 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 13 82607771 89256036 2 2 45 0 0 1 1 0 0.57 0.67 1 NA 0 NA NA NA NA NA NA 24.39 99.89 0.11 0 3 NA Whitelist COAD-US 0.68 0.87 NA 0 0.64 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 14 48929890 48970336 1 1 45 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 24.39 0.04 99.05 0 1 2 Whitelist COAD-US 0.62 0.86 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 16 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 17 33094213 37811661 6 6 45 2 0 1 3 0 0.34 0 8 0 0 8 3 4 18 4 4 24.39 6.26 89.3 0 11 2 Whitelist COAD-US 0.62 0 0 0 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 12 0.13 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 19 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 20 14929632 15289027 2 2 45 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 6 4 4 24.39 0.72 98.29 0 0 1 Whitelist COAD-US 0.54 0.21 0 0 0.48 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 21 NA NA 0 0 45 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.68 NA NA NA 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 22 41558403 41641917 1 1 45 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 24.39 0.16 99.84 0 1 2 Whitelist COAD-US 0.62 0.66 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::750770db-53cf-4021-a8c2-5e0ddb97fef5 X 121980267 122114088 1 1 45 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.39 99.91 0.09 0 1 2 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 750770db-53cf-4021-a8c2-5e0ddb97fef5 COAD 0.77 2.12 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8658 TCGA-AA-3994 750770db-53cf-4021-a8c2-5e0ddb97fef5 male alive C18.9 69 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 1 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 2 138281524 200299348 1 2 24 1 1 0 0 0 0.57 0.05 4 0 0 4 3 4 5 3 3 11.3 22.49 77.4 0 2 1 Whitelist COAD-US 0.68 0.15 0 0 0.64 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 4 0.08 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 3 60716779 60971160 1 1 24 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 11.3 0.13 99.75 0 1 2 Whitelist COAD-US 0.62 0.88 NA NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 4 NA NA 0 0 24 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.01 0 NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 5 57376566 58851253 1 1 24 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.3 0.82 99.05 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 6 NA NA 0 0 24 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.86 NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 8 18076352 129008764 1 2 24 2 0 0 0 0 0.11 0.35 2 NA 0.05 NA NA NA NA NA NA 11.3 2.51 97.49 0 1 2 Whitelist COAD-US 0.54 0.6 NA 0.05 0.48 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 4 0.08 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 11 57528896 57552685 1 1 24 0 0 0 1 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 11.3 0.38 99.19 0 2 NA Whitelist COAD-US 0.62 0.56 NA NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 12 NA NA 0 0 24 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.56 NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 13 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 14 NA NA 0 0 24 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist COAD-US NA 0.77 NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 15 57334161 57522657 1 1 24 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 11.3 0.18 99.7 0 1 2 Whitelist COAD-US 0.62 0.74 NA NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 16 68753357 69101453 1 1 24 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 11.3 0.39 99.51 0 1 2 Whitelist COAD-US 0.62 0.72 NA NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 17 49142311 49184629 1 1 24 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 11.3 0.05 99.94 0 1 2 Whitelist COAD-US 0.62 0 0 NA 0.59 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 2 0.04 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::790266bc-c252-43f4-85d1-1b06ee529cf8 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 790266bc-c252-43f4-85d1-1b06ee529cf8 COAD 0.39 2.1 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO44092 TCGA-A6-A566 790266bc-c252-43f4-85d1-1b06ee529cf8 female deceased C18.6 55 758 NA NA Included ColoRect-AdenoCA COAD US 1 24.93 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 1 3364193 39331910 10 10 68 3 1 3 3 0 0.75 0 1 0 0 NA NA NA NA NA NA 21.79 0 100 0 2 NA Whitelist COAD-US 0.86 0.01 0 0 0.83 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 20 0.15 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 2 NA NA 0 0 68 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.15 NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 3 125756522 129274310 1 1 68 0 0 1 0 0 0.39 0.09 3 NA NA NA NA NA NA NA NA 21.79 0.78 99.17 0 2 3 Whitelist COAD-US 0.62 0.25 NA NA 0.59 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 4 NA NA 0 0 68 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 0 NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 5 59167681 60254119 1 5 68 4 1 0 0 0 0.04 0.32 8 0 0 8 6 8 9 7 7 21.79 0.33 99.53 0 2 1 Whitelist COAD-US 0.45 0.57 0 0 0.36 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 6 101057734 101108651 1 1 68 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 21.79 0 99.85 0 2 NA Whitelist COAD-US 0.62 0.69 NA NA 0.59 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 7 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 8 12422567 12476039 1 1 68 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 21.79 96.58 0 0 1 NA Whitelist COAD-US 0.62 0.81 NA NA 0.59 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 9 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 10 107606551 110198382 2 2 68 1 1 0 0 0 0.57 0.56 1 0 0 NA NA NA NA NA NA 21.79 0 99.84 0 2 NA Whitelist COAD-US 0.68 0.78 0 0 0.64 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 11 30702282 109262954 6 6 68 1 1 2 2 0 0.88 0.14 8 0 0 8 8 8 9 9 9 21.79 4.23 95.35 0 1 2 Whitelist COAD-US 0.93 0.33 0 0 0.91 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 12 0.09 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 12 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 13 NA NA 0 0 68 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.55 NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 14 92337164 98105547 2 2 68 0 0 1 1 0 0.57 0.17 1 0 0 NA NA NA 4 4 4 21.79 49.3 49.78 0 1 NA Whitelist COAD-US 0.68 0.38 0 0 0.64 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 16 6406126 6927873 3 3 68 3 0 0 0 0 0.03 0 6 0 0 6 5 6 15 5 6 21.79 50.91 44.56 0 1 0 Whitelist COAD-US 0.41 0 0 0 0.33 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 17 20636894 25534531 2 2 68 0 1 0 1 0 0.57 0.04 2 0 0 NA NA NA NA NA NA 21.79 99.89 0 0 1 3 Whitelist COAD-US 0.68 0.13 0 0 0.64 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 19 10312695 42852031 1 2 68 2 0 0 0 0 0.11 0.39 1 NA 0 NA NA NA NA NA NA 21.79 0 99.83 2 2 NA Whitelist COAD-US 0.54 0.63 NA 0 0.48 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 20 14742058 15411459 7 7 68 7 0 0 0 0 0 0 10 0 0 10 4 9 11 4 5 21.79 98.71 0.31 0 1 2 Whitelist COAD-US 0.02 0 0 0 0.01 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 14 0.1 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 21 NA NA 0 0 68 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.79 NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7b47489f-c3cc-4388-b5d7-c7c02790a5f6 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 COAD 0.53 2.07 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 COAD-US DO9700 TCGA-AA-3956 7b47489f-c3cc-4388-b5d7-c7c02790a5f6 male alive C18.0 65 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 1 153045319 153068831 2 2 170 2 0 0 0 0 0.11 0.08 3 0 0 NA NA NA 11 10 11 36.38 42.31 54.72 0 3 2 Whitelist COAD-US 0.54 0.24 0 0 0.48 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 2 43615678 64237004 6 6 170 1 1 2 2 0 0.88 0.33 5 0 0 5 5 5 15 15 15 36.38 37.44 59.86 2 2 1 Whitelist COAD-US 0.93 0.58 0 0 0.91 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 3 104010925 142060855 4 4 170 2 0 1 1 0 0.57 0.88 3 0 0 NA NA NA NA NA NA 36.38 0.01 99.87 0 2 1 Whitelist COAD-US 0.68 1 0 0 0.64 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 4 43543906 150263030 1 5 170 5 0 0 0 0 0 0.54 5 0 0 5 5 5 6 6 6 36.38 21.3 78.69 0 2 1 Whitelist COAD-US 0.1 0.77 0 0 0.07 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 5 43284704 138939685 1 6 170 5 0 0 0 1 0 1 3 0 0 NA NA NA NA NA NA 36.38 0.04 99.84 0 2 1 Whitelist COAD-US 0.25 1 0 0 0.07 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 6 51887712 117239128 2 2 170 0 1 0 1 0 0.57 1 1 0 0 NA NA NA 7 7 7 36.38 0.23 99.59 0 2 NA Whitelist COAD-US 0.68 1 0 0 0.64 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 7 11930179 130577258 1 3 170 3 0 0 0 0 0.03 0.23 4 0 0 4 4 4 6 6 6 36.38 95.9 3.82 0 2 3 Whitelist COAD-US 0.41 0.46 0 0 0.33 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 8 35686035 56475743 4 5 170 1 0 1 2 1 0.57 0.6 6 0 0 6 6 6 6 6 6 36.38 30.25 65.73 0 1 2 Whitelist COAD-US 0.93 0.81 0 0 0.64 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 9 158416 107336171 1 3 170 2 0 0 1 0 0.3 0.43 8 0 0 8 8 8 8 8 8 36.38 2.76 94.72 0 1 2 Whitelist COAD-US 0.62 0.67 0 0 0.59 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 10 35658952 89700001 1 4 170 2 0 2 0 0 0.26 0.2 7 0 0 7 5 5 7 5 5 36.38 42.43 57.35 0 1 2 Whitelist COAD-US 0.62 0.42 0 0 0.59 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 11 24587264 77217999 10 18 170 5 2 2 1 8 0.31 0 7 0 0 7 7 7 11 11 11 36.38 26.2 73.38 0 2 1 Whitelist COAD-US 16_17 0.87 0 0 0 0.59 1 High confidence COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA Canonical without polyploidization 28 0.08 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 12 12498555 123717970 1 5 170 2 0 1 1 1 0.57 0.36 2 0 0 NA NA NA NA NA NA 36.38 24.75 71.46 0 1 2 Whitelist COAD-US 0.93 0.62 0 0 0.64 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 13 55738965 55753959 2 2 170 0 0 1 1 0 0.57 0.09 2 0 0 NA NA NA 7 4 6 36.38 93.32 6.68 0 3 4 Whitelist COAD-US 0.68 0.25 0 0 0.64 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 14 60698297 106855701 2 6 170 2 0 0 0 4 0.11 0.26 2 0 0 NA NA NA 5 5 5 36.38 29.76 69.78 0 1 2 Whitelist COAD-US 11 0.54 0.51 0 0 0.48 1 Linked to high confidence COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA With other complex events 8 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 15 67352452 67400749 1 1 170 1 0 0 0 0 0.39 0.81 1 0 NA NA NA NA NA NA NA 36.38 99.87 0 0 1 NA Whitelist COAD-US 0.62 0.96 0 NA 0.59 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 16 6213112 6590912 2 4 170 3 1 0 0 0 0.11 0 5 0 0 5 5 5 14 7 9 36.38 0.81 99.18 0 2 1 Whitelist COAD-US 0.54 0 0 0 0.48 1 Linked to high confidence COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA Canonical without polyploidization 8 0.02 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 17 18897943 41926223 3 7 170 1 0 1 1 4 0.8 0 5 0 0 5 5 5 15 9 9 36.38 30.45 69.53 0 2 1 Whitelist COAD-US 11 0.62 0.01 0 0 0.84 1 Linked to high confidence COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA Canonical without polyploidization 10 0.03 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 18 64742891 64802300 1 1 170 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 36.38 99.94 0 0 1 NA Whitelist COAD-US 0.62 0.26 NA NA 0.59 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 19 NA NA 0 0 170 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist COAD-US NA 0.93 NA NA NA 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 20 13946673 16259476 1 7 170 5 2 0 0 0 0.02 0.01 9 0 0 9 6 7 9 6 6 36.38 98.26 0.76 0 3 2 Whitelist COAD-US 0.41 0.05 0 0 0.33 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 21 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 22 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::7d8eab0a-e6c8-4449-9ebf-50c41db94a06 X 60114 143495852 1 8 170 5 2 0 1 0 0.07 0.86 10 0 0 10 8 10 11 9 9 36.38 51.06 48.67 0 2 3 Whitelist COAD-US 0.54 0.99 0 0 0.48 1 No COAD-US 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 COAD 0.7 2.02 ColoRect-AdenoCA NA 16 0.05 nonsynonymous_SNV,17_7578496_C_A,CN:2 2 COAD-US DO9788 TCGA-A6-2681 7d8eab0a-e6c8-4449-9ebf-50c41db94a06 female alive C18.9 73 NA 552 NA Included ColoRect-AdenoCA COAD US 0 18.16 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 1 NA NA 0 0 96 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.03 NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 2 225114384 242999441 12 12 96 3 3 3 3 0 1 0 25 0 0 25 23 25 34 24 32 20.38 93.22 6.69 0 2 3 Whitelist COAD-US 1 0 0 0 1 1 High confidence COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA Canonical without polyploidization 24 0.12 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 3 NA NA 0 0 96 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.2 NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 4 110377459 189112406 14 28 96 5 4 4 1 14 0.46 0 31 0 0 31 31 31 34 34 34 20.38 30.99 68.97 0 1 2 Whitelist COAD-US 0.9 0 0 0 0.64 1 High confidence COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA Canonical without polyploidization 42 0.22 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 5 NA NA 0 0 96 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.33 NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 6 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 7 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 8 34398944 47088423 4 12 96 0 1 1 2 8 0.57 0 13 0 0 13 3 5 20 3 6 20.38 95.58 0.66 0 1 4 Whitelist COAD-US 0.93 0 0 0 0.64 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 16 0.08 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 9 12712856 35693388 1 2 96 2 0 0 0 0 0.11 0.79 4 0 0 4 4 4 5 5 5 20.38 10.64 89.19 0 1 2 Whitelist COAD-US 0.54 0.94 0 0 0.48 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 10 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 11 2153042 2262723 1 1 96 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 20.38 0.08 99.49 0 2 3 Whitelist COAD-US 0.62 0.33 NA NA 0.59 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 12 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 13 71286567 75021025 3 4 96 1 1 0 1 1 0.8 0 10 0 0 10 4 4 16 4 5 20.38 6.71 92.67 0 5 3 Whitelist COAD-US 0.68 0 0 0 0.84 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 14 NA NA 0 0 96 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist COAD-US NA 0.63 NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 16 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 17 73414851 73426393 1 1 96 0 1 0 0 0 0.39 1 3 NA NA NA NA NA 4 3 3 20.38 95.56 0 0 3 5 Whitelist COAD-US 0.62 1 NA NA 0.59 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 18 NA NA 0 0 96 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 11 11 11 0 0 0 0 0 0 Whitelist COAD-US NA 0 0 NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 19 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 20 21306241 23913863 1 2 96 0 0 0 1 1 0.39 0 3 0 0 NA NA NA 12 4 6 20.38 57.19 35.72 0 3 2 Whitelist COAD-US 0.68 0 0 0 0.59 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 X 38970399 51838789 1 4 96 0 0 1 0 3 0.39 0 3 0 0 NA NA NA 14 14 14 20.38 6.56 93.21 0 1 2 Whitelist COAD-US 1 0 0 0 0.59 1 No COAD-US 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 COAD 0.88 2.09 ColoRect-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 COAD-US DO9106 TCGA-AA-A01S 84e34cf2-b3bb-4a1a-8fb7-6c2c604c4008 female alive C18.7 47 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::857a5889-19e7-4208-8362-f1377c408037 1 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 2 83148836 88206983 1 1 47 0 1 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 35.49 0 99.91 0 2 NA Whitelist COAD-US 0.62 0.95 NA NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 3 54085845 54250619 1 1 47 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 35.49 0 99.87 0 2 NA Whitelist COAD-US 0.62 0.93 NA NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 4 71167638 168390263 1 2 47 1 1 0 0 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 35.49 99.78 0.2 0 1 2 Whitelist COAD-US 0.68 0.93 NA 0 0.64 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 5 131028933 176779559 1 2 47 1 1 0 0 0 0.57 0.77 4 NA 0 4 3 4 5 3 3 35.49 0.27 99.61 0 2 1 Whitelist COAD-US 0.68 0.93 NA 0 0.64 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 6 NA NA 0 0 47 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.76 NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 7 NA NA 0 0 47 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.76 NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 8 40059852 43576406 1 1 47 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 35.49 29.4 67.18 0 2 3 Whitelist COAD-US 0.62 0.91 NA NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 9 127527972 127752044 1 1 47 0 1 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 35.49 7.51 91.79 0 2 NA Whitelist COAD-US 0.62 0.9 NA NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 10 170347 37518119 16 16 47 0 7 5 4 0 0.09 0 20 0 0 20 7 20 24 7 7 35.49 82.36 13.9 0 2 3 Whitelist COAD-US 0.54 0 0 0 0.48 1 High confidence COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA With other complex events 32 0.34 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 11 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 12 16785543 16971328 1 1 47 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 35.49 16.37 83.61 0 2 NA Whitelist COAD-US 0.62 0 0 NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 13 75460391 75592395 1 1 47 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 35.49 99.13 0 0 3 NA Whitelist COAD-US 0.62 0.88 NA NA 0.59 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 14 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 15 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 17 21833371 46772954 1 2 47 1 1 0 0 0 0.57 0.36 1 NA 0 NA NA NA NA NA NA 35.49 26.46 73.49 0 2 NA Whitelist COAD-US 0.68 0.62 NA 0 0.64 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 19 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 20 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::857a5889-19e7-4208-8362-f1377c408037 X NA NA 0 0 47 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.55 NA NA NA 1 No COAD-US 857a5889-19e7-4208-8362-f1377c408037 COAD 0.73 1.75 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44087 TCGA-A6-A567 857a5889-19e7-4208-8362-f1377c408037 male deceased C18.7 56 1881 NA NA Included ColoRect-AdenoCA COAD US 1 61.88 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 1 63705692 192145531 1 3 47 1 1 0 0 1 0.57 0.27 3 0 0 NA NA NA NA NA NA 84.16 100 0 0 3 5 Whitelist COAD-US 0.62 0.51 0 0 0.64 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 5 0.05 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 2 142438621 142456214 1 1 47 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.16 97.31 0 0 4 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 2 0.02 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 3 60048360 71016778 1 4 47 3 1 0 0 0 0.11 0.38 6 0 0 6 6 6 7 7 7 84.16 99.88 0 0 1 3 Whitelist COAD-US 0.54 0.63 0 0 0.48 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 8 0.09 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 4 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 5 95555553 179939564 1 3 47 2 1 0 0 0 0.3 0.01 5 0 0 5 3 5 5 3 5 84.16 97.59 2.29 0 3 1 Whitelist COAD-US 0.62 0.04 0 0 0.59 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 6 0.06 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 6 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 7 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 8 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 9 108068151 139642918 1 2 47 1 1 0 0 0 0.57 0.01 4 0 0 4 3 4 5 3 3 84.16 99.3 0 0 3 1 Whitelist COAD-US 0.68 0.05 0 0 0.64 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 4 0.04 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 10 76818000 117827653 4 4 47 2 0 1 1 0 0.57 0.06 5 0 0 5 5 5 5 5 5 84.16 99.82 0 0 3 1 Whitelist COAD-US 0.68 0.19 0 0 0.64 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 8 0.09 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 11 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 12 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 13 27518323 74076884 1 2 47 0 2 0 0 0 0.11 0.68 4 NA 0 4 3 4 5 3 3 84.16 100 0 0 4 6 Whitelist COAD-US 0.54 0.88 NA 0 0.48 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 4 0.04 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 14 57203252 87587613 3 3 47 1 0 1 1 0 0.8 0.18 2 0 0 NA NA NA NA NA NA 84.16 98.65 0.43 0 2 4 Whitelist COAD-US 0.87 0.4 0 0 0.84 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 6 0.06 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 15 NA NA 0 0 47 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.63 NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 17 33524896 33549253 2 2 47 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 6 3 3 84.16 68.22 27.34 0 4 NA Whitelist COAD-US 0.68 0.04 0 0 0.64 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 4 0.04 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 19 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 20 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 21 NA NA 0 0 47 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.69 NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 22 31156208 31204557 1 1 47 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 84.16 0.09 99.91 0 1 2 Whitelist COAD-US 0.62 0.68 NA NA 0.59 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 2 0.02 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::9f45a227-1fd5-478c-a194-4a5c61b68cc3 X NA NA 0 0 47 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.76 NA NA NA 0 No COAD-US 9f45a227-1fd5-478c-a194-4a5c61b68cc3 COAD 0.62 3.32 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO219106 TCGA-QG-A5YW 9f45a227-1fd5-478c-a194-4a5c61b68cc3 female alive C18.0 55 NA 399 NA Included ColoRect-AdenoCA COAD US 0 13.12 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 1 49716450 240028146 1 5 134 2 1 1 0 1 0.57 0.52 11 0 0 11 4 11 12 4 4 21.82 40 60 0 3 2 Whitelist COAD-US 0.68 0.76 0 0 0.64 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 9 0.03 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 2 NA NA 0 0 134 0 0 0 0 0 NA 0.21 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.44 0 NA NA 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 3 17469216 98138020 2 6 134 3 1 0 0 2 0.11 0 13 0 0 13 4 7 21 4 5 21.82 24.72 75.14 0 2 1 Whitelist COAD-US 0.62 0.02 0 0 0.48 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 10 0.04 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 4 27415092 138809429 1 2 134 2 0 0 0 0 0.11 0.61 2 0 0 NA NA NA 5 5 5 21.82 26.68 73.31 0 1 2 Whitelist COAD-US 0.54 0.82 0 0 0.48 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 4 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 5 59571235 161942404 1 5 134 2 1 0 0 2 0.3 0.21 3 0 0 NA NA NA 6 3 3 21.82 7.08 92.8 0 2 1 Whitelist COAD-US 0.62 0.44 0 0 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 8 0.03 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 6 161443441 163524884 1 1 134 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA 5 3 3 21.82 2 97.86 0 1 2 Whitelist COAD-US 0.62 0.61 0 NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 7 28041345 30521525 2 2 134 0 0 1 1 0 0.57 0.44 3 0 0 NA NA NA 11 3 7 21.82 36.42 60.87 0 4 5 Whitelist COAD-US 0.68 0.69 0 0 0.64 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 4 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 8 25396733 55140651 1 4 134 0 2 1 0 1 0.3 0.03 6 0 0 6 0 6 10 4 9 21.82 81.84 14.21 0 2 3 Whitelist COAD-US 0.68 0.1 0 0 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 7 0.03 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 9 NA NA 0 0 134 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.4 NA NA NA 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 10 2958161 90473402 1 4 134 0 2 0 1 1 0.3 1 5 0 0 5 3 5 6 3 3 21.82 4.97 94.85 0 2 1 Whitelist COAD-US 0.68 1 0 0 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 7 0.03 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 11 78892582 78905325 1 1 134 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 21.82 1.6 97.84 0 2 NA Whitelist COAD-US 0.62 0.45 NA NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 12 65999 158589 1 1 134 1 0 0 0 0 0.39 0.54 1 NA NA NA NA NA 4 4 4 21.82 8.55 91.43 0 2 NA Whitelist COAD-US 0.62 0.77 NA NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 13 48884846 112603944 1 2 134 1 1 0 0 0 0.57 0.01 9 0 0 9 4 5 15 4 5 21.82 59.11 40.89 4 2 3 Whitelist COAD-US 0.68 0.03 0 0 0.64 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 4 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 14 67226216 84297417 1 2 134 0 2 0 0 0 0.11 0.8 2 0 0 NA NA NA NA NA NA 21.82 0.08 99 0 2 3 Whitelist COAD-US 0.54 0.95 0 0 0.48 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 4 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 15 87572635 87587556 1 1 134 0 0 1 0 0 0.39 0.43 1 0 0 NA NA NA NA NA NA 21.82 0.04 99.86 0 2 NA Whitelist COAD-US 0.62 0.68 0 0 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 16 6368297 6872570 2 2 134 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 15 5 5 21.82 1.23 98.68 0 1 0 Whitelist COAD-US 0.54 0.05 0 0 0.48 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 4 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 17 52797912 52824396 1 1 134 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.82 5.69 94.31 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 18 19877003 20893519 1 2 134 0 0 0 1 1 0.39 0.01 3 0 NA NA NA NA 8 4 4 21.82 73.61 20.62 0 3 2 Whitelist COAD-US 0.68 0.05 0 NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 3 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 19 13572429 13603515 1 1 134 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.82 0.05 99.77 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 2 0.01 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 20 9765751 58838108 1 5 134 1 1 0 1 2 0.8 0.01 7 0 0 7 3 4 7 3 4 21.82 47.57 51.44 0 2 1 Whitelist COAD-US 0.68 0.04 0 0 0.84 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 8 0.03 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 21 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 22 NA NA 0 0 134 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a06c09a8-0951-49f4-a765-5147bbcae109 X 7342669 100275330 1 3 134 0 2 0 0 1 0.11 0.17 5 NA 0 5 5 5 6 6 6 21.82 59.47 40.53 0 2 1 Whitelist COAD-US 0.62 0.38 NA 0 0.48 0 No COAD-US a06c09a8-0951-49f4-a765-5147bbcae109 COAD 0.86 2.12 ColoRect-AdenoCA NA 5 0.02 NA 2 COAD-US DO7831 TCGA-AA-3664 a06c09a8-0951-49f4-a765-5147bbcae109 male alive C18.2 74 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 1 49138295 49167690 1 1 19 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.9 42.45 57.55 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 2 0.05 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 3 60230143 60322143 1 1 19 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA NA NA NA 17.9 0.05 99.92 0 1 2 Whitelist COAD-US 0.62 0.34 0 NA 0.59 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 2 0.05 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 4 91072857 91109985 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.9 0.02 99.78 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 2 0.05 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 5 58474254 58489934 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.9 0.01 99.86 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 2 0.05 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 16 6573501 6856847 3 3 19 1 0 1 1 0 0.8 0 4 0 0 4 3 4 15 4 7 17.9 2.09 97.9 0 2 1 Whitelist COAD-US 0.87 0 0 0 0.84 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 6 0.16 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 20 14676403 15023093 3 3 19 3 0 0 0 0 0.03 0.01 3 0 0 NA NA NA 4 0 3 17.9 98.85 0.09 0 1 2 Whitelist COAD-US 0.41 0.04 0 0 0.33 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 6 0.16 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a435fdf4-a89a-499e-9006-cbb5693eab26 X NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US a435fdf4-a89a-499e-9006-cbb5693eab26 COAD 0.75 2.18 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO7858 TCGA-AA-A02Y a435fdf4-a89a-499e-9006-cbb5693eab26 male alive C18.0 73 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 1 NA NA 0 0 134 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist COAD-US NA 0.22 0 NA NA 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 2 82367223 230760439 1 6 134 4 1 0 1 0 0.11 0.12 5 0 0 5 4 5 6 4 4 53.4 44.16 55.74 2 2 3 Whitelist COAD-US 0.54 0.3 0 0 0.48 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 3 113667982 196047432 1 3 134 3 0 0 0 0 0.03 0.17 3 0 0 NA NA NA 4 4 4 53.4 96.94 0 0 4 3 Whitelist COAD-US 0.41 0.39 0 0 0.33 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 4 123887297 187708603 1 3 134 1 2 0 0 0 0.3 0.39 3 0 0 NA NA NA NA NA NA 53.4 0.07 99.82 0 2 1 Whitelist COAD-US 0.62 0.63 0 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 5 5424747 42429134 1 6 134 4 0 0 1 1 0.04 0.59 12 0 0 12 7 7 14 7 7 53.4 99.76 0.11 0 3 4 Whitelist COAD-US 0.54 0.81 0 0 0.36 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 6 44460983 88163494 3 4 134 1 0 2 0 1 0.3 0.15 6 0 0 6 3 4 9 3 4 53.4 10.02 87.12 0 6 2 Whitelist COAD-US 0.68 0.34 0 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 7 39647779 158482174 1 6 134 6 0 0 0 0 0 1 7 0 0 7 7 7 9 7 7 53.4 99.78 0 0 4 3 Whitelist COAD-US 0.04 1 0 0 0.03 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 8 38896665 141956910 1 5 134 3 1 0 1 0 0.28 0.43 12 0 0 12 12 12 13 12 12 53.4 68.08 31.78 0 2 3 Whitelist COAD-US 0.62 0.68 0 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 9 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 10 4459777 93753340 4 7 134 2 0 2 0 3 0.26 0.06 15 0 0 15 14 15 16 15 15 53.4 65.8 30.72 0 3 4 Whitelist COAD-US 0.77 0.18 0 0 0.59 1 High confidence COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA After polyploidization 11 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 11 89922423 89942808 1 1 134 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 53.4 0 99.57 0 2 NA Whitelist COAD-US 0.62 0.26 NA NA 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 12 NA NA 0 0 134 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.26 NA NA NA 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 13 57370501 114305254 1 5 134 3 1 1 0 0 0.28 0.15 5 0 0 5 4 5 9 6 6 53.4 99.25 0 0 5 6 Whitelist COAD-US 0.62 0.34 0 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 14 29374113 103116926 1 4 134 3 1 0 0 0 0.11 1 5 0 0 5 3 5 6 3 4 53.4 0.15 96.14 0 2 1 Whitelist COAD-US 0.54 1 0 0 0.48 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 15 63897757 64437157 1 1 134 1 0 0 0 0 0.39 0.79 2 NA NA NA NA NA 6 5 5 53.4 1.76 98.15 0 1 2 Whitelist COAD-US 0.62 0.94 NA NA 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 16 3570505 30491276 1 6 134 6 0 0 0 0 0 0.18 7 0 0 7 6 7 8 7 7 53.4 66.9 33.06 0 1 2 Whitelist COAD-US 0.04 0.39 0 0 0.03 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 17 6664257 51785038 1 3 134 2 0 1 0 0 0.3 0.79 5 0.1 0 5 5 5 5 5 5 53.4 0.62 99.38 0 2 1 Whitelist COAD-US 0.62 0.94 0.1 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 18 19213364 22646969 1 8 134 1 0 1 1 5 0.8 0 6 0 0 6 3 6 10 3 5 53.4 78.67 16.41 0 3 4 Whitelist COAD-US 21 0.87 0.02 0 0 0.84 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 19 10935657 15467488 1 2 134 2 0 0 0 0 0.11 0.05 4 0 0 4 4 4 11 7 8 53.4 52.53 45.95 0 2 3 Whitelist COAD-US 0.54 0.16 0 0 0.48 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 20 14829070 32595832 1 3 134 3 0 0 0 0 0.03 0.22 3 0 0 NA NA NA 6 3 4 53.4 99.03 0 0 4 3 Whitelist COAD-US 0.41 0.45 0 0 0.33 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 21 29868231 46722538 4 8 134 2 2 0 0 4 0.26 0 18 0 0 18 5 11 20 5 5 53.4 70.83 6.52 0 3 4 Whitelist COAD-US 0.62 0 0 0 0.59 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e 22 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::a512701f-88bb-4b05-8c94-fd285b9dd13e X 7447213 41704382 1 2 134 1 1 0 0 0 0.57 1 4 0 0 4 4 4 4 4 4 53.4 5.43 94.57 0 1 2 Whitelist COAD-US 0.68 1 0 0 0.64 1 No COAD-US a512701f-88bb-4b05-8c94-fd285b9dd13e COAD 0.8 2.77 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579361_C_A,CN:2 3 COAD-US DO9042 TCGA-AA-3666 a512701f-88bb-4b05-8c94-fd285b9dd13e male deceased C18.9 68 61 NA NA Included ColoRect-AdenoCA COAD US 1 2.01 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 1 4906911 246471750 1 24 154 1 6 0 0 17 0 0 9 0 0 9 5 9 9 5 5 16.83 0.08 99.92 0 2 1 Whitelist COAD-US 3_5_7 0.68 0 0 0 0.09 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 31 0.1 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 2 187349443 187487355 2 2 154 2 0 0 0 0 0.11 0.15 4 0 0 4 3 4 24 18 18 16.83 0.64 99.24 0 1 0 Whitelist COAD-US 0.54 0.34 0 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 3 3465278 174784574 1 16 154 8 0 0 0 8 0 0.06 9 0 0 9 6 6 10 6 6 16.83 0.5 99.37 0 1 2 Whitelist COAD-US 1 0.21 0.18 0 0 0 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 24 0.08 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 4 178420713 180301884 3 3 154 1 2 0 0 0 0.3 0.05 3 0 0 NA NA NA 19 8 8 16.83 1.47 98.52 0 2 3 Whitelist COAD-US 0.62 0.16 0 0 0.59 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 5 58280145 129435613 1 7 154 4 0 0 0 3 0.01 0.18 10 0 0 10 7 10 11 7 7 16.83 0.08 99.76 0 2 1 Whitelist COAD-US 1 0.02 0.4 0 0 0.16 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 11 0.04 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 6 143382542 143440159 2 2 154 0 0 1 1 0 0.57 0.61 2 0 0 NA NA NA 7 5 5 16.83 0.14 99.71 0 2 3 Whitelist COAD-US 0.68 0.82 0 0 0.64 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 7 3499849 146680702 1 11 154 4 1 0 0 6 0.04 0.29 8 0 0 8 7 8 8 7 7 16.83 62.41 37.37 0 2 1 Whitelist COAD-US 1 0.62 0.53 0 0 0.36 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 16 0.05 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 8 90260863 90398709 2 2 154 2 0 0 0 0 0.11 0.14 4 0 0 4 3 4 17 6 6 16.83 96.58 0 0 4 3 Whitelist COAD-US 0.54 0.33 0 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 9 28617463 109153585 1 3 154 3 0 0 0 0 0.03 0.53 4 0 0 4 4 4 5 5 5 16.83 0.16 99.13 0 1 2 Whitelist COAD-US 0.41 0.76 0 0 0.33 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 10 53391356 77631134 1 2 154 2 0 0 0 0 0.11 0.33 3 0 0 NA NA NA NA NA NA 16.83 0.33 99.49 0 2 1 Whitelist COAD-US 0.54 0.58 0 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 11 2070805 110507244 1 8 154 1 1 0 1 5 0.8 0.7 6 0.03 0 6 3 6 7 3 3 16.83 40.5 59.07 1 2 3 Whitelist COAD-US 1_5 0.87 0.9 0.03 0 0.84 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 11 0.04 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 12 58099904 58192120 2 2 154 0 0 1 1 0 0.57 0.13 1 NA 0 NA NA NA NA NA NA 16.83 99.92 0 0 3 NA Whitelist COAD-US 0.68 0.32 NA 0 0.64 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 13 NA NA 0 0 154 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.4 NA NA NA 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 14 43981628 67793248 1 2 154 2 0 0 0 0 0.11 0.64 4 0 0 4 4 4 7 7 7 16.83 1.8 94.5 0 1 2 Whitelist COAD-US 0.54 0.85 0 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 15 NA NA 0 0 154 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.7 NA NA NA 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 16 78284975 78723843 1 2 154 2 0 0 0 0 0.11 0.45 2 NA 0 NA NA NA NA NA NA 16.83 0.14 99.85 0 1 2 Whitelist COAD-US 0.54 0.69 NA 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 17 27854435 56456136 1 4 154 1 1 1 0 1 0.8 0.61 5 0 0 5 3 5 7 5 7 16.83 7.4 87.53 0 2 3 Whitelist COAD-US 0.68 0.83 0 0 0.84 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 7 0.02 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 18 NA NA 0 0 154 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.95 NA NA NA 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 19 NA NA 0 0 154 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.63 NA NA NA 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 20 14473962 15338672 4 4 154 4 0 0 0 0 0.01 0 9 0 0 9 3 6 14 3 8 16.83 91.16 0.64 0 1 2 Whitelist COAD-US 0.21 0 0 0 0.16 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 8 0.03 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 21 32323994 33149786 1 1 154 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.83 1.72 75.64 0 1 2 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 22 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::bfb07784-693b-4c25-874e-4ad6e04a5d46 X 7005023 7285510 2 2 154 2 0 0 0 0 0.11 0.58 2 0 0 NA NA NA 12 8 8 16.83 0.78 99 0 1 2 Whitelist COAD-US 0.54 0.8 0 0 0.48 0 No COAD-US bfb07784-693b-4c25-874e-4ad6e04a5d46 COAD 0.58 2.21 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577036_-_G,CN:2 3 COAD-US DO9732 TCGA-AA-3529 bfb07784-693b-4c25-874e-4ad6e04a5d46 female deceased C18.7 78 0 NA NA Included ColoRect-AdenoCA COAD US 1 0 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 1 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 2 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 3 5163978 5220402 1 1 18 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 89.94 99.97 0 0 3 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 4 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 5 NA NA 0 0 18 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist COAD-US NA 0.56 NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 6 112654148 131279704 1 1 18 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 89.94 99.86 0 0 4 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 7 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 8 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 9 2971071 3209145 1 1 18 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA 4 4 4 89.94 99.33 0 0 4 6 Whitelist COAD-US 0.62 0.75 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 11 2093845 2276001 1 1 18 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA 12 7 8 89.94 99.57 0 0 4 6 Whitelist COAD-US 0.62 0.8 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 12 NA NA 0 0 18 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist COAD-US NA 0.16 NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 13 NA NA 0 0 18 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist COAD-US NA 0.71 NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 15 90795806 90903835 1 1 18 0 1 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 89.94 99.86 0 0 4 6 Whitelist COAD-US 0.62 0.64 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 16 1916531 6738719 1 3 18 2 1 0 0 0 0.3 0.01 7 0 0 7 3 5 8 3 4 89.94 99.65 0.24 0 2 4 Whitelist COAD-US 0.62 0.05 0 0 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 6 0.17 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 20 14670089 37228489 1 2 18 2 0 0 0 0 0.11 0.06 6 NA 0 6 3 5 7 3 3 89.94 92.81 0 0 5 3 Whitelist COAD-US 0.54 0.18 NA 0 0.48 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 4 0.11 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 21 19913599 22002250 1 1 18 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 89.94 4.34 73.49 0 1 2 Whitelist COAD-US 0.62 0.42 NA NA 0.59 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::c83d38fc-e011-4f75-a100-96513611f3e9 X 1959036 35109574 1 2 18 2 0 0 0 0 0.11 0.23 2 NA 0.02 NA NA NA NA NA NA 89.94 99.73 0.04 0 2 4 Whitelist COAD-US 0.54 0.46 NA 0.02 0.48 0 No COAD-US c83d38fc-e011-4f75-a100-96513611f3e9 COAD 0.56 3.79 ColoRect-AdenoCA NA 4 0.11 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO44088 TCGA-QG-A5YV c83d38fc-e011-4f75-a100-96513611f3e9 female alive C18.7 64 NA 821 NA Included ColoRect-AdenoCA COAD US 0 27.01 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 1 59140844 185672762 1 4 52 1 2 0 0 1 0.3 0.06 3 0 0 NA NA NA NA NA NA 7.12 0.07 99.93 0 2 4 Whitelist COAD-US 0.54 0.19 0 0 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 7 0.07 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 2 138499940 142787125 1 2 52 1 0 1 0 0 0.57 0.32 4 NA 0 4 0 4 4 0 4 7.12 0.18 99.73 0 2 1 Whitelist COAD-US 0.68 0.57 NA 0 0.64 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 3 4292992 105452583 1 7 52 4 1 1 0 1 0.11 0.09 5 0 0 5 0 4 6 3 5 7.12 0.36 99.61 0 1 2 Whitelist COAD-US 0.62 0.25 0 0 0.48 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 13 0.12 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 4 48369632 183969335 1 4 52 4 0 0 0 0 0.01 0.4 5 0 0 5 5 5 5 5 5 7.12 0.69 99.09 0 2 1 Whitelist COAD-US 0.21 0.64 0 0 0.16 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 8 0.08 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 5 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 6 NA NA 0 0 52 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.62 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 8 136348581 137457541 1 1 52 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 6 3 6 7.12 96.42 0.04 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 9 114088827 114155212 1 1 52 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.12 0 97.59 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 10 44431000 68484454 1 5 52 5 0 0 0 0 0 0.01 4 0 0 4 4 4 5 5 5 7.12 0.33 99.44 0 1 2 Whitelist COAD-US 0.1 0.04 0 0 0.07 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 10 0.1 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 11 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 12 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 13 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 14 83059888 96975330 1 2 52 2 0 0 0 0 0.11 0.22 2 0 0 NA NA NA 5 3 3 7.12 1.19 96.01 0 1 2 Whitelist COAD-US 0.54 0.46 0 0 0.48 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 4 0.04 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 15 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 16 6669644 78844492 1 3 52 3 0 0 0 0 0.03 0.16 4 0 0 4 3 4 5 3 3 7.12 7.53 92.38 0 2 1 Whitelist COAD-US 0.41 0.37 0 0 0.33 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 6 0.06 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 17 57788712 57909661 1 1 52 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.12 0 100 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 18 69129652 69168792 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.12 0.05 99.94 0 0 2 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 2 0.02 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 19 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 21 NA NA 0 0 52 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.33 NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::ca22edd4-eb7c-4677-84aa-6f0354459a19 X 88859116 153280412 1 3 52 0 2 1 0 0 0.3 0.33 5 0 0 5 4 5 6 5 5 7.12 37.91 62.09 0 2 3 Whitelist COAD-US 0.62 0.59 0 0 0.59 0 No COAD-US ca22edd4-eb7c-4677-84aa-6f0354459a19 COAD 0.56 2.07 ColoRect-AdenoCA NA 6 0.06 NA 2 COAD-US DO8858 TCGA-AA-A00R ca22edd4-eb7c-4677-84aa-6f0354459a19 female alive C18.0 64 NA 30 NA Included ColoRect-AdenoCA COAD US 0 0.99 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 1 NA NA 0 0 73 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.15 NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 2 NA NA 0 0 73 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 8 9 0 0 0 0 0 0 Whitelist COAD-US NA 0.01 0 NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 3 39776907 107701411 1 4 73 0 4 0 0 0 0.01 0.82 2 0 0 NA NA NA NA NA NA 25.27 0.19 99.65 0 2 3 Whitelist COAD-US 0.21 0.96 0 0 0.16 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 4 12889839 133910642 1 4 73 1 3 0 0 0 0.11 1 3 0 0 NA NA NA NA NA NA 25.27 0.01 99.98 0 2 3 Whitelist COAD-US 0.54 1 0 0 0.48 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 5 157785757 157818831 1 1 73 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 25.27 0 97.31 0 2 NA Whitelist COAD-US 0.62 0.25 NA NA 0.59 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 6 31359991 31453764 1 1 73 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 25.27 0.05 99.8 0 2 3 Whitelist COAD-US 0.62 0.32 NA NA 0.59 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 7 8652815 98049889 1 2 73 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 25.27 0 99.77 0 2 NA Whitelist COAD-US 0.54 1 0 0 0.48 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 8 55707365 117308561 1 2 73 0 2 0 0 0 0.11 1 3 0 0 NA NA NA 6 4 4 25.27 25.45 74.54 0 2 3 Whitelist COAD-US 0.54 1 0 0 0.48 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 9 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 10 114900843 115104672 2 2 73 1 0 1 0 0 0.57 0.39 2 0 0 NA NA NA 6 3 5 25.27 0.28 99.54 0 3 4 Whitelist COAD-US 0.68 0.64 0 0 0.64 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 11 2175487 126371282 1 4 73 1 3 0 0 0 0.11 0.58 6 0 0 6 5 6 7 5 5 25.27 0.31 99.26 0 2 3 Whitelist COAD-US 0.54 0.81 0 0 0.48 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 12 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 13 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 14 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 15 31220683 59401481 1 2 73 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 25.27 99.9 0 0 0 1 Whitelist COAD-US 0.54 1 NA 0 0.48 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 16 686887 8361265 1 4 73 1 2 0 1 0 0.57 0.13 5 0 0 5 3 5 5 3 3 25.27 0.44 99.47 0 2 1 Whitelist COAD-US 0.68 0.32 0 0 0.64 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 17 29755964 52225944 6 14 73 1 0 2 3 8 0.34 0 10 0 0 10 10 10 14 14 14 25.27 54.55 45.43 0 1 2 Whitelist COAD-US 0.68 0 0 0 0.59 1 High confidence COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA Canonical without polyploidization 20 0.14 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 18 5986794 35455161 9 11 73 2 1 3 3 2 0.75 0 18 0 0 18 7 7 19 7 7 25.27 80.49 14.55 0 1 2 Whitelist COAD-US 0.87 0 0 0 0.83 1 High confidence COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA With other complex events 20 0.14 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 19 16027309 16173753 1 1 73 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.27 0.25 99.33 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 20 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 21 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d 22 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d3b7ada6-5395-4212-a921-8e97c92b605d X 7242993 125124905 1 2 73 1 1 0 0 0 0.57 0.59 3 NA 0.04 NA NA NA NA NA NA 25.27 99.98 0.02 0 1 2 Whitelist COAD-US 0.68 0.81 NA 0.04 0.64 1 No COAD-US d3b7ada6-5395-4212-a921-8e97c92b605d COAD 0.61 1.85 ColoRect-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 COAD-US DO44094 TCGA-NH-A50V d3b7ada6-5395-4212-a921-8e97c92b605d male alive C18.0 69 NA 154 NA Included ColoRect-AdenoCA COAD US 0 5.07 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 1 71724515 108453200 5 18 181 1 2 1 1 13 0.9 0 26 0 0 26 4 9 28 4 8 93.18 99.43 0.57 0 4 5 Whitelist COAD-US 7 0.99 0 0 0 0.92 0 Linked to low confidence COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA With other complex events 23 0.06 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 2 62959536 80869021 1 2 181 2 0 0 0 0 0.11 0.06 4 0 0 4 4 4 11 5 5 93.18 99.72 0.19 0 2 3 Whitelist COAD-US 0.54 0.18 0 0 0.48 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 3 104062409 195529410 1 4 181 4 0 0 0 0 0.01 0.01 8 0 0 8 6 8 9 7 9 93.18 99.84 0.03 0 4 3 Whitelist COAD-US 0.21 0.04 0 0 0.16 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 8 0.02 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 4 15516678 20416468 2 2 181 0 0 1 1 0 0.57 0.07 4 0 0 4 4 4 13 7 7 93.18 99.64 0.16 0 1 3 Whitelist COAD-US 0.68 0.21 0 0 0.64 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 5 58948568 104208118 1 4 181 4 0 0 0 0 0.01 0.02 4 0 0 4 4 4 5 5 5 93.18 99.75 0.14 0 2 3 Whitelist COAD-US 0.21 0.08 0 0 0.16 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 8 0.02 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 6 57343264 162671265 1 5 181 2 2 0 0 1 0.26 0.08 6 0 0 6 4 6 7 5 5 93.18 99.78 0.09 0 4 5 Whitelist COAD-US 0.62 0.23 0 0 0.59 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 9 0.02 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 7 81604311 155367371 53 60 181 21 11 12 9 7 0.09 0 71 0 0 71 5 9 81 5 9 93.18 97.24 0 0 6 8 Whitelist COAD-US 0.54 0 0 0 0.48 0 Low confidence COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA With other complex events 113 0.31 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 8 90393666 114985680 1 3 181 3 0 0 0 0 0.03 0.04 6 0 0 6 4 6 7 4 4 93.18 99.99 0 0 4 5 Whitelist COAD-US 0.41 0.14 0 0 0.33 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 6 0.02 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 9 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 10 82639041 118673841 1 4 181 2 1 0 0 1 0.3 0.29 6 0 0 6 3 4 7 3 3 93.18 99.82 0 0 1 4 Whitelist COAD-US 0.68 0.53 0 0 0.59 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 7 0.02 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 11 104017554 116711790 1 2 181 0 0 1 1 0 0.57 0.02 4 NA 0 4 3 4 5 3 3 93.18 99.44 0 0 3 2 Whitelist COAD-US 0.68 0.08 NA 0 0.64 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 12 64128791 64462866 1 1 181 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA 4 4 4 93.18 99.6 0.38 0 2 3 Whitelist COAD-US 0.62 0.36 NA NA 0.59 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 2 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 13 19541475 97747877 13 15 181 2 6 2 3 2 0.35 0 22 0 0 22 5 5 22 5 5 93.18 100 0 0 4 8 Whitelist COAD-US 0.68 0 0 0 0.59 0 Low confidence COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA With other complex events 28 0.08 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 14 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 15 NA NA 0 0 181 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.2 NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 16 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 17 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 18 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 19 19470134 28682329 1 2 181 2 0 0 0 0 0.11 0.78 2 0 0 NA NA NA 7 5 5 93.18 98.71 0.83 0 2 3 Whitelist COAD-US 0.54 0.94 0 0 0.48 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 20 14773713 15151704 2 2 181 2 0 0 0 0 0.11 0.12 7 0 0 7 3 5 16 3 5 93.18 92.28 0 0 7 4 Whitelist COAD-US 0.54 0.3 0 0 0.48 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 21 NA NA 0 0 181 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.91 NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf 22 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA NA 0 0 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::d8e9ea52-ff28-4626-baa3-71350fd53ddf X 74956302 87154653 5 9 181 1 2 1 1 4 0.9 0 10 0 0 10 3 3 26 3 3 93.18 95.29 1.33 0 7 2 Whitelist COAD-US 7 0.85 0 0 0 0.92 0 Linked to low confidence COAD-US d8e9ea52-ff28-4626-baa3-71350fd53ddf COAD 0.5 3.72 ColoRect-AdenoCA With other complex events 14 0.04 frameshift_deletion,17_7577558_-_G,CN:3 3 COAD-US DO44091 TCGA-AY-A54L d8e9ea52-ff28-4626-baa3-71350fd53ddf female alive C18.3 74 NA 158 NA Included ColoRect-AdenoCA COAD US 0 5.2 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 1 15337929 15348295 1 1 153 0 1 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 46.62 48.28 48.75 0 2 NA Whitelist COAD-US 0.62 0.02 0 NA 0.59 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 2 142408522 186989800 1 2 153 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 46.62 99.86 0.03 0 2 3 Whitelist COAD-US 0.54 0.01 NA 0 0.48 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 3 17258736 175553304 1 6 153 3 1 0 0 2 0.11 0.34 3 0 0 NA NA NA 5 3 3 46.62 99.64 0.22 0 3 2 Whitelist COAD-US 0.54 0.59 0 0 0.48 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 4 91965155 91988570 2 2 153 2 0 0 0 0 0.11 0.2 1 0 0 NA NA NA 6 5 5 46.62 28.59 71.39 0 2 NA Whitelist COAD-US 0.54 0.42 0 0 0.48 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 5 24112171 24149429 1 1 153 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 3 5 46.62 76.55 20.78 0 3 4 Whitelist COAD-US 0.62 0.03 NA NA 0.59 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 6 221993 169360831 63 63 153 22 15 14 12 0 0.31 0 87 0 0 87 23 36 88 23 36 46.62 32.55 64.53 0 2 3 Whitelist COAD-US 0.62 0 0 0 0.59 1 High confidence COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA With other complex events 126 0.41 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 7 109828801 110553176 2 2 153 2 0 0 0 0 0.11 1 5 0 0 5 5 5 7 5 5 46.62 97.45 0 0 4 3 Whitelist COAD-US 0.54 1 0 0 0.48 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 8 36669140 50619306 1 4 153 1 0 1 1 1 0.8 0.2 7 0 0 7 5 7 8 6 8 46.62 99.85 0.03 0 3 1 Whitelist COAD-US 0.68 0.42 0 0 0.84 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 9 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 10 61765194 65693278 2 4 153 0 1 1 2 0 0.57 1 4 0 0 4 4 4 9 5 5 46.62 0.15 99.67 0 2 3 Whitelist COAD-US 0.68 1 0 0 0.64 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 11 55401532 56647507 2 3 153 1 0 1 0 1 0.57 0.13 4 NA 0 4 3 4 4 3 3 46.62 58.33 37.83 0 3 2 Whitelist COAD-US 0.87 0.32 NA 0 0.64 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 12 NA NA 0 0 153 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.17 NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 13 71307703 75738289 1 2 153 1 0 0 1 0 0.57 0.5 1 0 0 NA NA NA NA NA NA 46.62 100 0 0 4 NA Whitelist COAD-US 0.68 0.74 0 0 0.64 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 14 37931883 37959766 1 1 153 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 46.62 0.03 99.06 0 1 2 Whitelist COAD-US 0.62 0.26 NA NA 0.59 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 15 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 16 6158511 85767876 1 3 153 2 0 0 1 0 0.3 1 6 0 0 6 4 6 7 4 4 46.62 1.04 98.87 0 1 2 Whitelist COAD-US 0.62 1 0 0 0.59 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 17 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 18 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 19 12946273 41119452 1 2 153 1 0 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 46.62 99.83 0 0 3 NA Whitelist COAD-US 0.68 1 0 0 0.64 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 20 14703448 15072248 5 5 153 5 0 0 0 0 0 0 5 0 0 5 0 3 27 4 4 46.62 88.67 4.23 0 8 5 Whitelist COAD-US 0.1 0 0 0 0.07 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 21 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe 22 NA NA 0 0 153 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.68 NA NA NA 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dca004bf-9c14-45a1-b186-ab3759f6c7fe X 7019272 7932538 1 2 153 2 0 0 0 0 0.11 0.03 1 NA 0 NA NA NA NA NA NA 46.62 0 100 0 2 NA Whitelist COAD-US 0.54 0.1 NA 0 0.48 1 No COAD-US dca004bf-9c14-45a1-b186-ab3759f6c7fe COAD 0.62 2.64 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 COAD-US DO8047 TCGA-AA-3685 dca004bf-9c14-45a1-b186-ab3759f6c7fe male alive C18.9 69 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.52 NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 6 2030368 80371021 1 2 4 1 0 1 0 0 0.57 0.02 1 NA 0.04 NA NA NA NA NA NA 10.02 0 99.76 0 2 NA Whitelist COAD-US 0.68 0.08 NA 0.04 0.64 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 4 0.5 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 16 78604337 78617640 1 1 4 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 10.02 0 99.91 0 2 NA Whitelist COAD-US 0.62 0.27 NA NA 0.59 0 No COAD-US dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 COAD 0.19 2.1 ColoRect-AdenoCA NA 2 0.25 NA 2 COAD-US DO44090 TCGA-A6-A565 dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 female deceased C18.4 34 494 NA NA Included ColoRect-AdenoCA COAD US 1 16.25 COAD-US::dd7a53ee-cb08-40c4-9935-51d1ca17e9e8 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 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Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 4 93568528 93582929 1 1 4 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 40.6 0 99.99 0 2 NA Whitelist COAD-US 0.62 0.48 NA NA 0.59 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 2 0.25 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 10 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.39 NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 11 2126425 2289250 1 1 4 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 40.6 0.12 99.45 0 2 3 Whitelist COAD-US 0.62 0.39 NA NA 0.59 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 2 0.25 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 16 69741294 69762118 1 1 4 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 40.6 0 99.88 0 2 NA Whitelist COAD-US 0.62 0.27 NA NA 0.59 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 2 0.25 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df228c56-89ac-4122-93b3-6c0740c4ec09 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df228c56-89ac-4122-93b3-6c0740c4ec09 COAD 0.77 2.42 ColoRect-AdenoCA NA 0 0 NA 3 COAD-US DO9940 TCGA-AA-3534 df228c56-89ac-4122-93b3-6c0740c4ec09 female alive C18.2 78 NA 0 NA Included ColoRect-AdenoCA COAD US 0 0 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 1 188397945 188449645 1 1 27 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 15.91 0.02 99.98 0 2 3 Whitelist COAD-US 0.62 0.9 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 2 14770287 224022916 1 4 27 1 2 0 0 1 0.3 0.28 2 0.5 0 NA NA NA NA NA NA 15.91 67.77 32.12 29 2 3 Whitelist COAD-US 0.62 0.52 0.5 0 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 7 0.13 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 3 76282797 174908705 1 3 27 1 1 0 0 1 0.57 0.43 3 NA 0 NA NA NA NA NA NA 15.91 0.02 99.84 22 2 1 Whitelist COAD-US 0.87 0.68 NA 0 0.64 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 5 0.09 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 4 48599169 123368430 1 2 27 1 0 1 0 0 0.57 0.1 1 0 0 NA NA NA NA NA NA 15.91 20.73 79.02 9 2 NA Whitelist COAD-US 0.68 0.27 0 0 0.64 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 4 0.07 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 5 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 6 101726078 163191708 1 2 27 1 1 0 0 0 0.57 0.68 4 NA 0 4 3 4 4 3 3 15.91 21.75 78.1 13 3 2 Whitelist COAD-US 0.68 0.88 NA 0 0.64 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 4 0.07 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 8 66691946 66712017 1 2 27 1 0 0 0 1 0.39 0.16 1 NA NA NA NA NA NA NA NA 15.91 54.43 45.56 6 3 NA Whitelist COAD-US 0.54 0.36 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 3 0.06 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 9 NA NA 0 0 27 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.53 NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 10 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 11 79621368 79632897 1 1 27 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.91 0 99.57 0 2 NA Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 14 79866297 79993026 1 1 27 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 15.91 0.12 98.97 0 1 2 Whitelist COAD-US 0.62 0.8 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 15 44998002 45008069 1 1 27 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 15.91 0 99.89 0 2 NA Whitelist COAD-US 0.62 0.76 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 16 78644126 78688499 2 2 27 2 0 0 0 0 0.11 0.16 4 NA 0 4 3 4 5 3 3 15.91 0.05 99.85 0 1 0 Whitelist COAD-US 0.54 0.37 NA 0 0.48 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 4 0.07 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 18 70138557 70151996 1 1 27 0 1 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 15.91 0 99.96 6 2 NA Whitelist COAD-US 0.62 0.37 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 20 14859312 15069970 1 1 27 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 15.91 0 99.02 1 2 NA Whitelist COAD-US 0.62 0.69 NA NA 0.59 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c X NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c COAD 0.47 2.02 ColoRect-AdenoCA NA 0 0 stopgain;stopgain,17_7578212_A_G;17_7579406_T_G,CN:2 2 COAD-US DO7801 TCGA-CA-6718 df5ab6cc-6f68-4b6b-95e2-954c6b57ba9c male alive C18.9 46 NA 3 NA Included ColoRect-AdenoCA COAD US 0 0.1 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 1 172752975 174379146 1 1 20 0 1 0 0 0 0.39 0.2 2 0 NA NA NA NA 6 5 6 5.52 0.65 96.1 0 2 3 Whitelist COAD-US 0.62 0.43 0 NA 0.59 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 2 NA NA 0 0 20 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist COAD-US NA 0.23 0 NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 3 77646125 77657321 1 1 20 0 1 0 0 0 0.39 0.65 2 NA NA NA NA NA 6 3 3 5.52 0.37 99.58 0 2 5 Whitelist COAD-US 0.62 0.86 NA NA 0.59 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 4 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 7 6393754 6460488 1 1 20 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 5.52 1.88 98.07 0 0 2 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 10 26543913 26592680 1 1 20 0 1 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 5.52 0 99.78 2 2 NA Whitelist COAD-US 0.62 0.47 NA NA 0.59 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 13 92556518 93009619 1 2 20 1 0 0 1 0 0.57 0.03 4 0 0 4 0 3 5 0 3 5.52 0.39 85.45 6 0 2 Whitelist COAD-US 0.68 0.11 0 0 0.64 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 4 0.1 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 16 6187530 6544322 1 1 20 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 5.52 0.39 99.51 0 2 3 Whitelist COAD-US 0.62 0.67 NA NA 0.59 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 20 14610644 15119493 1 2 20 2 0 0 0 0 0.11 0.07 1 NA 0 NA NA NA NA NA NA 5.52 0 99.87 0 2 NA Whitelist COAD-US 0.54 0.2 NA 0 0.48 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 4 0.1 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 22 NA NA 0 0 20 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.44 NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e457344d-76fb-46bf-b362-61a6e811d131 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US e457344d-76fb-46bf-b362-61a6e811d131 COAD 0.48 1.94 ColoRect-AdenoCA NA 0 0 NA 2 COAD-US DO9876 TCGA-AA-A00N e457344d-76fb-46bf-b362-61a6e811d131 male deceased C18.0 75 122 NA NA Included ColoRect-AdenoCA COAD US 1 4.01 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 1 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 2 77524205 142238656 1 4 94 3 1 0 0 0 0.11 0.35 6 0 0 6 3 6 7 3 3 46.13 99.75 0.15 0 3 2 Whitelist COAD-US 0.54 0.61 0 0 0.48 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 3 41397602 93652241 1 2 94 1 0 1 0 0 0.57 0.84 2 0 0 NA NA NA NA NA NA 46.13 0.12 99.76 0 1 2 Whitelist COAD-US 0.68 0.98 0 0 0.64 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 4 91130072 91253097 1 1 94 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 46.13 99.89 0 0 3 4 Whitelist COAD-US 0.62 0.08 NA NA 0.59 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 5 NA NA 0 0 94 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.11 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 6 25348753 163191609 1 3 94 3 0 0 0 0 0.03 0.38 6 0 0 6 3 6 7 4 4 46.13 0.23 99.62 0 1 2 Whitelist COAD-US 0.41 0.63 0 0 0.33 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 7 87603799 133193674 1 3 94 3 0 0 0 0 0.03 0.49 6 0 0 6 6 6 7 7 7 46.13 99.78 0 0 3 4 Whitelist COAD-US 0.41 0.74 0 0 0.33 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 8 NA NA 0 0 94 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.48 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 9 37263000 125824196 1 2 94 1 1 0 0 0 0.57 0.79 4 0 0 4 3 4 5 3 3 46.13 99.79 0.1 0 3 2 Whitelist COAD-US 0.68 0.94 0 0 0.64 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 10 NA NA 0 0 94 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.33 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 11 47112599 47136892 1 1 94 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 46.13 0 99.57 0 2 NA Whitelist COAD-US 0.62 0.58 NA NA 0.59 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 12 NA NA 0 0 94 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.95 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 13 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 14 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 15 NA NA 0 0 94 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 1 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 16 5749444 47540710 1 7 94 7 0 0 0 0 0 0.01 13 0 0 13 6 6 13 6 6 46.13 1.27 98.4 0 2 1 Whitelist COAD-US 0.02 0.06 0 0 0.01 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 14 0.07 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 17 NA NA 0 0 94 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.76 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 18 48403454 48588779 1 1 94 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 46.13 99.96 0 0 0 1 Whitelist COAD-US 0.62 0.76 NA NA 0.59 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 19 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 20 7138898 57297995 32 32 94 7 9 9 7 0 0.92 0 80 0 0 80 13 19 93 13 13 46.13 92.52 0 9 5 4 Whitelist COAD-US 0.95 0 0 0 0.94 1 High confidence COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA With other complex events 64 0.34 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 22 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 X NA NA 0 0 94 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.26 NA NA NA 1 No COAD-US e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 COAD 0.82 2.5 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_A_C,CN:1 2 COAD-US DO44089 TCGA-AD-A5EK e8ec26bd-c88d-42b9-ac8a-ab121b8140f8 male alive C18.2 51 NA 13 NA Included ColoRect-AdenoCA COAD US 0 0.43 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 1 NA NA 0 0 116 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.13 NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 2 148837623 148934630 1 1 116 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 87.02 99.9 0 0 3 4 Whitelist COAD-US 0.62 0.03 NA NA 0.59 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 3 60305675 60721342 5 5 116 5 0 0 0 0 0 0.2 8 0 0 8 0 5 16 4 4 87.02 99.75 0.13 0 2 3 Whitelist COAD-US 0.1 0.42 0 0 0.07 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 4 91762491 149349043 1 3 116 3 0 0 0 0 0.03 1 6 0 0 6 6 6 8 8 8 87.02 99.9 0 0 3 4 Whitelist COAD-US 0.41 1 0 0 0.33 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 5 64114604 164021593 1 3 116 2 0 0 0 1 0.11 0.56 3 0 0 NA NA NA 4 4 4 87.02 99.86 0 0 3 4 Whitelist COAD-US 0.62 0.79 0 0 0.48 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 6 162763831 163243177 5 5 116 5 0 0 0 0 0 0.07 7 0 0 7 3 7 22 7 14 87.02 99.53 0.29 1 1 2 Whitelist COAD-US 0.1 0.21 0 0 0.07 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 7 7833513 142755012 1 9 116 7 2 0 0 0 0 0.06 11 0 0 11 5 5 11 5 5 87.02 99.78 0 0 5 4 Whitelist COAD-US 0.12 0.19 0 0 0.08 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 18 0.08 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 8 40179980 90596104 2 10 116 2 1 0 1 6 0.57 0 8 0 0 8 3 5 10 3 3 87.02 99.86 0.03 0 4 3 Whitelist COAD-US 16_4 0.62 0 0 0 0.64 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 9 NA NA 0 0 116 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.26 NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 10 4835843 86898602 20 22 116 3 5 6 6 2 0.75 0 32 0 0 32 9 19 37 9 19 87.02 81.93 17.9 2 4 2 Whitelist COAD-US 0.76 0 0 0 0.83 1 High confidence COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA With other complex events 42 0.18 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 11 8916759 55154008 1 2 116 1 1 0 0 0 0.57 0.38 1 0.01 0 NA NA NA NA NA NA 87.02 99.57 0 0 3 NA Whitelist COAD-US 0.68 0.63 0.01 0 0.64 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 12 NA NA 0 0 116 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.15 NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 13 41094181 86937994 1 2 116 2 0 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 87.02 100 0 0 4 5 Whitelist COAD-US 0.54 0.69 NA 0 0.48 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 14 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 16 6939413 89169777 1 9 116 2 1 1 1 4 0.9 0 10 0 0 10 7 10 11 8 8 87.02 99.95 0 0 5 6 Whitelist COAD-US 0.85 0.02 0 0 0.92 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 17 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 18 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 19 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 20 14754506 58469322 1 7 116 4 0 0 2 1 0.06 0 13 0 0 13 3 9 15 3 5 87.02 99.03 0 0 5 8 Whitelist COAD-US 0.62 0.01 0 0 0.48 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 13 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 21 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 22 33678917 33754313 1 1 116 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 87.02 99.85 0.15 0 2 3 Whitelist COAD-US 0.62 1 NA NA 0.59 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::f87c6dcc-1a9e-4df5-962c-1f946e2611f8 X 7119772 96844234 1 2 116 1 0 0 1 0 0.57 0.29 5 0.05 0.04 5 3 4 8 5 6 87.02 96.51 0.1 1 2 5 Whitelist COAD-US 0.68 0.54 0.05 0.04 0.64 1 No COAD-US f87c6dcc-1a9e-4df5-962c-1f946e2611f8 COAD 0.71 3.69 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 COAD-US DO10631 TCGA-AA-A01T f87c6dcc-1a9e-4df5-962c-1f946e2611f8 female alive C18.7 63 NA 31 NA Included ColoRect-AdenoCA COAD US 0 1.02 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 1 49025257 174566540 1 2 146 2 0 0 0 0 0.11 0.04 5 0 0 5 3 4 6 3 4 89.76 96.81 0.16 0 5 2 Whitelist COAD-US 0.54 0.15 0 0 0.48 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 2 77520571 78178589 2 2 146 2 0 0 0 0 0.11 0.65 4 0 0 4 3 4 19 9 9 89.76 99.79 0.1 0 3 2 Whitelist COAD-US 0.54 0.86 0 0 0.48 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 3 20473702 196392506 1 11 146 9 2 0 0 0 0 0.52 22 0 0 22 10 22 22 10 10 89.76 99.63 0.32 1 3 4 Whitelist COAD-US 0.02 0.76 0 0 0.02 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 22 0.08 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 4 91058851 91958534 2 2 146 2 0 0 0 0 0.11 0.25 2 0 0 NA NA NA 8 8 8 89.76 94.42 5.37 0 2 3 Whitelist COAD-US 0.54 0.49 0 0 0.48 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 5 59010244 59701791 4 4 146 4 0 0 0 0 0.01 0.12 15 0 0 15 3 8 25 6 6 89.76 84.78 15.08 0 2 1 Whitelist COAD-US 0.21 0.31 0 0 0.16 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 6 162602957 162802637 2 2 146 2 0 0 0 0 0.11 0.86 4 0 0 4 3 4 14 8 8 89.76 99.84 0.02 0 3 2 Whitelist COAD-US 0.54 0.99 0 0 0.48 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 7 33486756 111178587 1 4 146 3 1 0 0 0 0.11 0.85 8 0 0 8 8 8 9 9 9 89.76 99.78 0 0 3 4 Whitelist COAD-US 0.54 0.99 0 0 0.48 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 8 100209830 100631212 1 1 146 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA 7 3 6 89.76 67.14 29.23 0 4 5 Whitelist COAD-US 0.62 0.7 0 NA 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 9 15601223 100777299 1 3 146 2 1 0 0 0 0.3 0.67 6 0 0 6 4 6 7 5 5 89.76 99.33 0 0 4 3 Whitelist COAD-US 0.62 0.87 0 0 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 10 52730935 54055865 1 2 146 1 1 0 0 0 0.57 0.17 4 0 0 4 3 4 5 3 3 89.76 99.82 0 0 4 3 Whitelist COAD-US 0.68 0.38 0 0 0.64 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 11 26928544 106681312 1 5 146 3 2 0 0 0 0.14 0.69 8 0 0 8 6 8 9 6 6 89.76 96.2 0.01 0 3 4 Whitelist COAD-US 0.62 0.89 0 0 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 12 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 13 35478856 35516525 1 1 146 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 89.76 100 0 0 6 NA Whitelist COAD-US 0.62 0.49 NA NA 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 14 NA NA 0 0 146 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.59 NA NA NA 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 15 99383955 99414862 1 1 146 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 5 5 5 89.76 99.71 0.2 0 2 3 Whitelist COAD-US 0.62 0.42 NA NA 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 16 5359903 7198386 2 6 146 6 0 0 0 0 0 0 19 0 0 19 6 9 31 8 8 89.76 99.25 0.34 0 2 1 Whitelist COAD-US 0.04 0 0 0 0.03 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 17 NA NA 0 0 146 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.42 NA NA NA 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 18 36733747 36785257 1 1 146 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 89.76 0.07 99.9 0 1 2 Whitelist COAD-US 0.62 0.41 NA NA 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 19 19157709 35833504 1 2 146 1 0 1 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 89.76 99.62 0 0 5 4 Whitelist COAD-US 0.68 1 NA 0 0.64 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 20 14227685 15415808 14 14 146 14 0 0 0 0 0 0 13 0 0 13 5 5 14 5 5 89.76 98.59 0.43 0 2 4 Whitelist COAD-US 0 0 0 0 0 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 28 0.1 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 21 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec 22 33615234 33638427 1 1 146 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 89.76 100 0 0 3 4 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::fafd4576-0709-49e1-926f-ad1ee09907ec X 7225705 8149527 3 3 146 3 0 0 0 0 0.03 0 8 0 0 8 4 7 31 6 6 89.76 99.59 0.18 0 3 4 Whitelist COAD-US 0.41 0 0 0 0.33 0 No COAD-US fafd4576-0709-49e1-926f-ad1ee09907ec COAD 0.88 3.93 ColoRect-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 COAD-US DO7990 TCGA-A6-2683 fafd4576-0709-49e1-926f-ad1ee09907ec female alive C18.2 57 NA 472 NA Included ColoRect-AdenoCA COAD US 0 15.53 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 1 195383826 195482133 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 4 4 71.66 42.45 57.54 0 3 4 Whitelist COAD-US 0.62 1 NA NA 0.59 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 2 0.06 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 2 120294354 230523647 1 1 18 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 71.66 99.9 0 0 3 NA Whitelist COAD-US 0.62 0.41 NA NA 0.59 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 2 0.06 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 3 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 4 133447687 133598680 1 1 18 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 71.66 0 99.99 0 2 NA Whitelist COAD-US 0.62 0.3 NA NA 0.59 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 2 0.06 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 5 84509334 105372179 1 2 18 1 0 0 1 0 0.57 0.1 1 0 0 NA NA NA NA NA NA 71.66 99.85 0 0 3 NA Whitelist COAD-US 0.68 0.26 0 0 0.64 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 4 0.11 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 6 101203146 101901125 1 2 18 2 0 0 0 0 0.11 0.29 3 NA 0 NA NA NA NA NA NA 71.66 99.71 0.09 0 3 2 Whitelist COAD-US 0.54 0.54 NA 0 0.48 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 4 0.11 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 7 NA NA 0 0 18 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA 0.49 NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 8 NA NA 0 0 18 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist COAD-US NA 0.47 NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 9 11153992 11177004 1 1 18 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 71.66 99.33 0 0 3 4 Whitelist COAD-US 0.62 0.75 NA NA 0.59 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 2 0.06 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 13 51795358 86091782 1 3 18 3 0 0 0 0 0.03 0.02 5 0 0 5 5 5 6 5 6 71.66 85.85 0 0 7 6 Whitelist COAD-US 0.41 0.09 0 0 0.33 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 6 0.17 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 COAD-US::ff1407c6-9174-4bae-a19b-d34ca71b898c X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist COAD-US NA NA NA NA NA 0 No COAD-US ff1407c6-9174-4bae-a19b-d34ca71b898c COAD 0.62 3.12 ColoRect-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 COAD-US DO9074 TCGA-A6-2680 ff1407c6-9174-4bae-a19b-d34ca71b898c female alive C18.3 72 NA 522 NA Included ColoRect-AdenoCA COAD US 0 17.17 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 2 48040878 48069014 1 1 9 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 0.44 0.54 96.75 0 2 NA Whitelist DLBC-US 0.62 0.77 NA NA 0.59 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 2 0.11 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 5 NA NA 0 0 9 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.28 NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 14 106112734 106360367 1 3 9 2 0 0 1 0 0.3 0 2 0 0 NA NA NA NA NA NA 0.44 0.23 83.85 1 0 1 Whitelist DLBC-US 0.62 0.01 0 0 0.59 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 6 0.33 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 15 92902239 92977744 1 1 9 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 0.44 0.07 84.37 0 2 3 Whitelist DLBC-US 0.62 0.46 NA NA 0.59 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 2 0.11 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 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NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.03 NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::0e9fcccc-0630-408d-a121-2c6413824cb7 X NA NA 0 0 9 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.62 NA NA NA 0 No DLBC-US 0e9fcccc-0630-408d-a121-2c6413824cb7 DLBC 0.45 2 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222309 TCGA-FF-8062 0e9fcccc-0630-408d-a121-2c6413824cb7 female alive C83.3 60 NA 259 NA Included Lymph-BNHL DLBC US 0 8.52 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 1 NA NA 0 0 54 0 0 0 0 0 NA 0.32 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.57 0 NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 0 0 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 2 57999275 101267618 1 2 54 2 0 0 0 0 0.11 0.62 6 0 0 6 3 6 7 3 7 94.78 95.45 1.85 0 4 2 Whitelist DLBC-US 0.54 0.84 0 0 0.48 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 4 0.04 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 3 101704506 101729062 1 1 54 1 0 0 0 0 0.39 0.43 1 0 NA NA NA NA NA NA NA 94.78 99.95 0 0 3 NA Whitelist DLBC-US 0.62 0.68 0 NA 0.59 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 2 0.02 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 4 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 0 0 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 5 107643741 150320899 1 2 54 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 94.78 99.86 0 0 3 4 Whitelist DLBC-US 0.54 1 0 0 0.48 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 4 0.04 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 6 138189010 138242746 1 1 54 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 94.78 99.83 0 0 3 NA Whitelist DLBC-US 0.62 0.33 0 NA 0.59 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 2 0.02 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 7 50318672 82969084 1 2 54 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 94.78 99.78 0 0 3 NA Whitelist DLBC-US 0.68 1 NA 0 0.64 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 4 0.04 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 8 59802507 60045059 2 2 54 2 0 0 0 0 0.11 0.35 3 0 0 NA NA NA 4 0 3 94.78 99.97 0.02 0 2 3 Whitelist DLBC-US 0.54 0.61 0 0 0.48 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 4 0.04 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 9 6909277 7056178 1 1 54 1 0 0 0 0 0.39 0.06 2 0.18 NA NA NA NA 5 3 4 94.78 99.3 0 0 3 5 Whitelist DLBC-US 0.62 0.19 0.18 NA 0.59 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 2 0.02 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 10 8225599 61535097 1 1 54 0 0 1 0 0 0.39 1 2 NA 0.02 NA NA NA NA NA NA 94.78 99.82 0 0 3 4 Whitelist DLBC-US 0.62 1 NA 0.02 0.59 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 2 0.02 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 11 NA NA 0 0 54 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.76 NA NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 0 0 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 12 67842381 67854578 1 1 54 1 0 0 0 0 0.39 0.74 1 0 NA NA NA NA NA NA NA 94.78 99.92 0 0 4 NA Whitelist DLBC-US 0.62 0.91 0 NA 0.59 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 2 0.02 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 13 NA NA 0 0 54 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.9 NA NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe 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Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 0 0 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 0 0 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::1f971af1-6772-4fe6-8d35-bbe527a037fe X 31252064 154938678 1 4 54 3 1 0 0 0 0.11 0 9 0 0 9 4 9 11 6 6 94.78 82.35 17.43 0 3 2 Whitelist DLBC-US 0.54 0.01 0 0 0.48 0 No DLBC-US 1f971af1-6772-4fe6-8d35-bbe527a037fe DLBC 0.58 3.43 Lymph-BNHL NA 8 0.07 NA 4 DLBC-US DO222305 TCGA-FF-8041 1f971af1-6772-4fe6-8d35-bbe527a037fe female alive C38.1 28 NA 626 NA Included Lymph-BNHL DLBC US 0 20.59 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 4 131867145 131898417 1 1 8 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 12.6 0.02 99.97 0 2 3 Whitelist DLBC-US 0.62 0.68 NA NA 0.59 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 2 0.12 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 6 75441323 96550192 1 1 8 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 12.6 12.34 87.52 0 1 2 Whitelist DLBC-US 0.62 0.64 NA NA 0.59 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 2 0.12 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 8 NA NA 0 0 8 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.18 NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 10 NA NA 0 0 8 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.56 NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 14 106329456 106350730 1 1 8 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 12.6 0.65 99.07 0 1 2 Whitelist DLBC-US 0.62 0.01 NA NA 0.59 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 2 0.12 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 15 75697398 75776052 1 1 8 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 12.6 99.87 0 0 1 3 Whitelist DLBC-US 0.62 0.42 NA NA 0.59 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 2 0.12 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb 22 23055740 23235965 1 1 8 1 0 0 0 0 0.39 0.09 3 NA NA NA NA NA 4 0 3 12.6 0.35 99.65 0 0 1 Whitelist DLBC-US 0.62 0.25 NA NA 0.59 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 2 0.12 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::67325322-483f-443f-9ffa-2a20d108a2fb X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US 67325322-483f-443f-9ffa-2a20d108a2fb DLBC 0.64 1.99 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222303 TCGA-FF-8046 67325322-483f-443f-9ffa-2a20d108a2fb male alive C08.0 51 NA 377 NA Included Lymph-BNHL DLBC US 0 12.4 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 1 52105012 170864080 7 7 112 1 1 2 3 0 0.67 1 5 0 0 5 5 5 7 7 7 30.28 10.4 89.59 0 2 1 Whitelist DLBC-US 0.77 1 0 0 0.74 1 Low confidence DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL Canonical without polyploidization 14 0.06 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 2 60753889 124345172 29 31 112 8 5 7 9 2 0.75 0 34 0 0 34 4 5 36 4 6 30.28 46.69 50.58 0 3 2 Whitelist DLBC-US 0.87 0 0 0 0.83 1 Low confidence DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL With other complex events 60 0.27 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 3 94536061 99358591 1 1 112 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 30.28 0 99.87 0 2 NA Whitelist DLBC-US 0.62 0.03 NA NA 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 2 0.01 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 4 NA NA 0 0 112 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.04 NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 5 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 6 2717341 2970309 1 1 112 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 30.28 0.15 99.72 0 2 3 Whitelist DLBC-US 0.62 0.21 NA NA 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 2 0.01 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 7 NA NA 0 0 112 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.97 0 NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 8 NA NA 0 0 112 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.16 NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 9 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 10 NA NA 0 0 112 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.49 NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 11 47923852 48134201 1 1 112 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 30.28 62.62 36.83 0 2 NA Whitelist DLBC-US 0.62 0.2 NA NA 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 2 0.01 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 12 10645709 14468882 3 3 112 1 0 0 2 0 0.3 0 7 0 0 7 7 7 24 9 9 30.28 26.55 73.37 0 2 1 Whitelist DLBC-US 0.62 0.01 0 0 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 6 0.03 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 13 48751351 51415211 1 4 112 1 0 1 0 2 0.57 0.44 4 0 0 4 4 4 6 6 6 30.28 48.91 51.09 0 1 2 Whitelist DLBC-US 1 0.69 0 0 0.64 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 6 0.03 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 14 106330072 106518399 2 2 112 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 30.28 0.43 98.79 1 1 NA Whitelist DLBC-US 0.54 1 0 0 0.48 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 4 0.02 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 15 57653603 57715367 1 1 112 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 30.28 99.92 0 0 0 1 Whitelist DLBC-US 0.62 0.63 NA NA 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 2 0.01 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 16 2075019 31393909 28 29 112 9 4 7 8 1 0.57 0 36 0 0 36 9 9 39 10 10 30.28 95.08 0.4 1 3 1 Whitelist DLBC-US 0.68 0 0 0 0.64 1 High confidence DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL With other complex events 57 0.25 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 17 NA NA 0 0 112 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.63 NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 18 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 19 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 20 17172178 17775392 1 1 112 0 1 0 0 0 0.39 0.31 2 0 NA NA NA NA 7 5 5 30.28 76.69 23.07 0 3 4 Whitelist DLBC-US 0.62 0.56 0 NA 0.59 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 2 0.01 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 21 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 22 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::a8e2df1e-4042-42af-9231-3a00e83489f0 X NA NA 0 0 112 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist DLBC-US NA 0.63 NA NA NA 1 No DLBC-US a8e2df1e-4042-42af-9231-3a00e83489f0 DLBC 0.88 1.98 Lymph-BNHL NA 0 0 stopgain,17_7578419_A_C,CN:1 3 DLBC-US DO222308 TCGA-FF-8043 a8e2df1e-4042-42af-9231-3a00e83489f0 female alive C83.3 70 NA 580 NA Included Lymph-BNHL DLBC US 0 19.08 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 1 112513141 112622962 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.46 0.04 99.96 0 2 3 Whitelist DLBC-US 0.62 1 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 2 25013155 75138962 2 4 26 1 1 0 0 2 0.57 0 9 0 0 9 5 9 11 5 5 5.46 3.29 96.62 0 2 1 Whitelist DLBC-US 0.68 0.01 0 0 0.64 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 6 0.12 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 3 60348438 60737140 1 2 26 2 0 0 0 0 0.11 0.11 3 0 0 NA NA NA NA NA NA 5.46 0.1 99.76 0 2 1 Whitelist DLBC-US 0.54 0.28 0 0 0.48 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 4 0.08 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 4 NA NA 0 0 26 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist DLBC-US NA 0.25 NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 5 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 1 NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 6 121403515 121468456 1 1 26 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.46 0 99.85 0 2 NA Whitelist DLBC-US 0.62 1 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 7 110654016 110725264 1 1 26 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.46 0 99.77 0 2 NA Whitelist DLBC-US 0.62 1 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 8 121623361 121729838 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.46 0.07 99.92 0 2 3 Whitelist DLBC-US 0.62 1 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 11 131705165 131725644 1 1 26 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.46 0 99.57 0 2 NA Whitelist DLBC-US 0.62 1 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 13 91076022 95108181 1 1 26 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 5.46 3.5 96.5 0 2 3 Whitelist DLBC-US 0.62 0.81 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 14 106093910 106360371 1 3 26 3 0 0 0 0 0.03 0.01 3 0 0 NA NA NA 4 3 3 5.46 0.7 98.8 0 1 0 Whitelist DLBC-US 0.41 0.04 0 0 0.33 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 6 0.12 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 16 78685975 78708753 1 1 26 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 5.46 0 99.86 0 2 NA Whitelist DLBC-US 0.62 0.75 NA NA 0.59 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 2 0.04 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 17 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.75 NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab DLBC 0.81 1.93 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222307 TCGA-FF-8061 c8cde9ea-89e9-4ee8-8a46-417a48f6d3ab male alive C83.3 42 NA 433 NA Included Lymph-BNHL DLBC US 0 14.24 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 1 6248290 33278414 1 2 194 1 1 0 0 0 0.57 0 4 0.2 0 4 3 4 6 4 4 34.96 3.76 96.24 0 2 1 Whitelist DLBC-US 0.68 0.01 0.2 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 2 78501990 124621247 1 3 194 1 1 0 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 34.96 0.2 99.7 0 2 1 Whitelist DLBC-US 0.87 0.01 0 0 0.84 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 6 0.02 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 3 187394551 187911436 3 3 194 0 3 0 0 0 0.03 0.78 6 0 0 6 0 3 23 8 8 34.96 99.54 0.36 0 3 4 Whitelist DLBC-US 0.41 0.93 0 0 0.33 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 6 0.02 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 4 63458076 63762520 1 1 194 0 1 0 0 0 0.39 0.04 2 0 NA NA NA NA 4 3 3 34.96 11.07 88.79 0 2 3 Whitelist DLBC-US 0.62 0.15 0 NA 0.59 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 5 109757727 124581230 2 2 194 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 34.96 31.16 68.71 0 3 NA Whitelist DLBC-US 0.68 0.02 0 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 6 77150428 119203793 1 2 194 1 0 1 0 0 0.57 0 3 NA 0 NA NA NA 6 4 4 34.96 99.85 0 0 3 1 Whitelist DLBC-US 0.68 0.01 NA 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 7 119894102 119947168 1 1 194 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA 5 0 3 34.96 89.44 10.33 0 4 NA Whitelist DLBC-US 0.62 0.13 NA NA 0.59 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 8 113189156 146287372 1 2 194 0 1 0 1 0 0.57 0.42 4 0 0 4 3 4 5 3 3 34.96 22.61 77.33 0 4 3 Whitelist DLBC-US 0.68 0.67 0 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 9 8189397 96357054 30 89 194 10 4 9 7 59 0.42 0 49 0 0 49 6 12 49 6 12 34.96 15.57 83.73 0 1 2 Whitelist DLBC-US 18 0.62 0 0 0 0.63 1 Low confidence DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL With other complex events 119 0.31 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 10 13540331 25314378 1 8 194 1 1 0 0 6 0.57 0.01 7 0 0 7 4 7 9 4 9 34.96 23.99 75.84 0 1 3 Whitelist DLBC-US 9 0.87 0.05 0 0 0.64 1 Linked to low confidence DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL With other complex events 10 0.03 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 11 NA NA 0 0 194 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.01 NA NA NA 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 12 NA NA 0 0 194 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.01 NA NA NA 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 13 19719472 64497953 7 7 194 0 2 2 3 0 0.44 0.55 11 0 0 11 11 11 13 13 13 34.96 34.99 62.04 1 2 1 Whitelist DLBC-US 0.68 0.78 0 0 0.64 1 High confidence DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL Canonical without polyploidization 14 0.04 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 14 106177055 106829595 1 2 194 1 0 1 0 0 0.57 0.68 2 0 0 NA NA NA 5 3 3 34.96 83.43 16.09 2 1 2 Whitelist DLBC-US 0.68 0.88 0 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 15 NA NA 0 0 194 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.16 NA NA NA 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 16 78651371 78792669 2 2 194 2 0 0 0 0 0.11 0.65 2 0 0 NA NA NA 5 3 3 34.96 0.19 99.7 0 1 2 Whitelist DLBC-US 0.54 0.86 0 0 0.48 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 17 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 18 24492930 66759172 11 68 194 3 3 2 3 57 0.97 0 37 0 0 37 13 15 41 13 17 34.96 95.35 0 1 4 5 Whitelist DLBC-US 9 0.81 0 0 0 0.98 1 High confidence DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL With other complex events 79 0.2 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 19 30713082 51051023 1 3 194 1 2 0 0 0 0.3 1 6 0 0 6 3 6 7 3 3 34.96 5.27 94.3 0 2 3 Whitelist DLBC-US 0.62 1 0 0 0.59 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 6 0.02 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 20 12412637 57107613 1 4 194 1 1 0 0 2 0.57 1 1 0 0 NA NA NA NA NA NA 34.96 0 99.03 0 2 NA Whitelist DLBC-US 1 1 0 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 6 0.02 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 21 31538599 31584439 1 1 194 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 34.96 0 77.35 0 2 NA Whitelist DLBC-US 0.62 0.76 NA NA 0.59 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 22 22677325 43020805 1 2 194 1 1 0 0 0 0.57 0.5 5 0 0 5 3 3 6 3 3 34.96 1.71 98.29 0 2 0 Whitelist DLBC-US 0.68 0.75 0 0 0.64 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 4 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f0a326d2-1f3e-4a5d-bca8-32aaccc52338 X 102225085 102271650 1 1 194 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 34.96 78.47 21.3 0 0 1 Whitelist DLBC-US 0.62 0.08 NA NA 0.59 1 No DLBC-US f0a326d2-1f3e-4a5d-bca8-32aaccc52338 DLBC 0.8 2.27 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222306 TCGA-FF-8042 f0a326d2-1f3e-4a5d-bca8-32aaccc52338 female alive C83.3 57 NA 608 NA Included Lymph-BNHL DLBC US 0 20 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 1 55264402 103533863 4 4 67 2 1 1 0 0 0.57 0.04 5 0 0 5 5 5 15 11 11 21.45 50.29 49.71 0 2 1 Whitelist DLBC-US 0.68 0.14 0 0 0.64 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 8 0.06 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 2 89160116 90260252 2 2 67 1 0 0 1 0 0.57 1 4 0 0 4 4 4 7 7 7 21.45 4.37 95.54 0 1 2 Whitelist DLBC-US 0.68 1 0 0 0.64 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 3 NA NA 0 0 67 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist DLBC-US NA 0.84 NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 4 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 5 33848762 40666271 2 2 67 0 0 1 1 0 0.57 0.31 4 0 0 4 4 4 7 7 7 21.45 0.24 96.64 0 1 2 Whitelist DLBC-US 0.68 0.57 0 0 0.64 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 6 56822732 108229928 1 2 67 2 0 0 0 0 0.11 0.6 4 0 0 4 4 4 5 5 5 21.45 4.6 95.25 0 1 2 Whitelist DLBC-US 0.54 0.82 0 0 0.48 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 7 55639194 87339237 2 2 67 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 21.45 0 99.78 0 2 NA Whitelist DLBC-US 0.68 1 0 0 0.64 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 8 46892789 67653625 1 1 67 1 0 0 0 0 0.39 0.39 2 0 NA NA NA NA NA NA NA 21.45 46.22 53.78 0 1 2 Whitelist DLBC-US 0.62 0.64 0 NA 0.59 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 9 21680178 23518204 1 2 67 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 3 21.45 1.3 98 0 1 0 Whitelist DLBC-US 0.54 1 NA 0 0.48 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 10 34345107 34375350 1 1 67 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 21.45 0 99.83 0 2 NA Whitelist DLBC-US 0.62 0.63 NA NA 0.59 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 11 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 12 20056002 20239043 1 1 67 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 21.45 0.14 99.78 0 1 2 Whitelist DLBC-US 0.62 0.93 NA NA 0.59 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 13 NA NA 0 0 67 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 0.91 NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 14 106330469 107062178 2 4 67 1 0 2 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 21.45 0.1 99.63 1 2 NA Whitelist DLBC-US 0.68 0 0 0 0.64 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 8 0.06 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 15 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA 1 NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 16 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 17 46626414 65367171 3 3 67 0 1 1 1 0 0.8 0.01 1 0 0 NA NA NA NA NA NA 21.45 3.03 96.97 0 2 NA Whitelist DLBC-US 0.87 0.04 0 0 0.84 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 6 0.04 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 18 13130174 13151485 1 1 67 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA 4 4 4 21.45 9.83 90.14 0 1 2 Whitelist DLBC-US 0.62 0.9 NA NA 0.59 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 2 0.01 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 19 19206411 57263524 1 3 67 3 0 0 0 0 0.03 0.04 4 0 0 4 4 4 7 7 7 21.45 0.46 99.36 0 1 2 Whitelist DLBC-US 0.41 0.15 0 0 0.33 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 6 0.04 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 20 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 21 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist DLBC-US NA NA NA NA NA 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 0 0 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 22 23165770 50289966 1 2 67 2 0 0 0 0 0.11 0.05 4 0 0 4 4 4 5 5 5 21.45 1.7 98.3 0 1 2 Whitelist DLBC-US 0.54 0.15 0 0 0.48 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 4 0.03 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 DLBC-US::f978cb0f-d319-4c01-b4c5-23ae1403a106 X 12019521 77127264 1 3 67 2 0 1 0 0 0.3 1 3 0.02 0 NA NA NA NA NA NA 21.45 99.78 0 0 1 0 Whitelist DLBC-US 0.62 1 0.02 0 0.59 0 No DLBC-US f978cb0f-d319-4c01-b4c5-23ae1403a106 DLBC 0.91 1.89 Lymph-BNHL NA 6 0.04 NA 2 DLBC-US DO222304 TCGA-FF-8047 f978cb0f-d319-4c01-b4c5-23ae1403a106 female alive C83.3 38 NA 126 NA Included Lymph-BNHL DLBC US 0 4.14 EOPC-DE::EOPC-01 1 NA NA 0 0 10 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.78 NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 2 134179585 135137715 2 2 10 1 0 0 1 0 0.57 0.2 5 NA 0 5 5 5 9 9 9 12.31 19.51 80.39 0 2 1 Whitelist EOPC-DE 0.68 0.43 NA 0 0.64 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 4 0.2 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 4 NA NA 0 0 10 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.74 NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 8 0 146364022 0 0 10 0 0 0 0 0 NA 0 NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.01 NA NA NA 0 High confidence EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA Canonical without polyploidization 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 False negative; manually included EOPC-DE::EOPC-01 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 12 112938845 115173998 1 1 10 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 11 9 9 12.31 28.13 68.12 0 1 2 Whitelist EOPC-DE 0.62 0 0 NA 0.59 0 High confidence EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA Canonical without polyploidization 2 0.1 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 False negative; manually included EOPC-DE::EOPC-01 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 16 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.47 NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 20 NA NA 0 0 10 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.42 NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 22 17558726 18248952 1 1 10 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 12.31 0 100 0 2 NA Whitelist EOPC-DE 0.62 0.29 NA NA 0.59 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 2 0.1 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-01 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-01 EOPC 0.53 1.85 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10806 EOPC-01 male alive C61 no treatment 45 1179 1179 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 38.78 EOPC-DE::EOPC-010 1 55663081 60169193 1 1 11 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 9.64 1.81 98.19 0 1 2 Whitelist EOPC-DE 0.62 0.81 NA NA 0.59 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 2 0.09 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 2 NA NA 0 0 11 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 4 NA NA 0 0 11 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.76 NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 6 99202322 99497795 1 2 11 2 0 0 0 0 0.11 0.14 3 NA 0 NA NA NA 5 3 3 9.64 6.42 93.43 0 2 4 Whitelist EOPC-DE 0.54 0.33 NA 0 0.48 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 4 0.18 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 8 NA NA 0 0 11 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.27 NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 16 NA NA 0 0 11 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.5 NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 20 NA NA 0 0 11 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.09 NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 21 40102555 42870155 1 2 11 1 0 0 0 1 0.39 0.01 4 NA NA 4 3 4 4 3 3 9.64 15.1 62.25 0 1 0 Whitelist EOPC-DE 0.68 0.04 NA NA 0.59 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 3 0.14 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 22 29110745 29206334 1 1 11 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 9.64 0.37 99.63 0 2 NA Whitelist EOPC-DE 0.62 0 NA NA 0.59 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 2 0.09 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-010 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-010 EOPC 0.45 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10823 EOPC-010 male alive C61 no treatment 46 1470 1470 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 48.36 EOPC-DE::EOPC-011 1 208926638 212891321 1 1 27 0 0 1 0 0 0.39 1 3 NA NA NA NA NA 7 7 7 8.95 0.41 99.59 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 3 36958690 96921577 1 4 27 0 0 1 0 3 0.39 0.01 5 0.03 0 5 5 5 6 6 6 8.95 10.07 89.72 0 2 1 Whitelist EOPC-DE 6 0.68 0.05 0.03 0 0.59 1 Linked to high confidence EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA Canonical without polyploidization 5 0.09 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 6 145595779 168829760 4 12 27 2 2 0 0 8 0.26 0 14 0 0 14 14 14 19 19 19 8.95 8.65 91.21 0 1 2 Whitelist EOPC-DE 3_10 0.68 0 0 0 0.59 1 High confidence EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA Canonical without polyploidization 16 0.3 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 8 19605800 105632071 1 3 27 0 0 2 0 1 0.11 0.16 4 NA 0 4 4 4 7 7 7 8.95 7.67 92.32 0 1 2 Whitelist EOPC-DE 0.41 0.36 NA 0 0.48 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 5 0.09 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 9 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 10 21109565 51786603 1 8 27 1 0 0 1 6 0.57 0 6 0 0 6 6 6 9 9 9 8.95 1.86 97.96 0 1 2 Whitelist EOPC-DE 6 0.62 0 0 0 0.64 1 Linked to high confidence EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA Canonical without polyploidization 10 0.19 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 13 30684729 95726987 1 1 27 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 4 4 4 8.95 56.57 42.6 0 1 2 Whitelist EOPC-DE 0.62 0.48 NA NA 0.59 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 18 NA NA 0 0 27 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.76 NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 21 39875541 42866686 1 1 27 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 8.95 6.21 70.92 0 1 2 Whitelist EOPC-DE 0.62 0.53 NA NA 0.59 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-011 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-011 EOPC 0.5 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10825 EOPC-011 male alive C61 no treatment 48 1458 1458 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.96 EOPC-DE::EOPC-017 1 NA NA 0 0 6 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.63 NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 3 69609892 87886858 4 4 6 1 1 1 1 0 1 0 3 0 0 NA NA NA NA NA NA 4.98 0.44 99.52 3 2 1 Whitelist EOPC-DE 1 0 0 0 1 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 8 0.67 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 21 NA NA 0 0 6 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.21 NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-017 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-017 EOPC 0.48 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52498 EOPC-017 male alive C61 no treatment 48 1107 1107 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.41 EOPC-DE::EOPC-018 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 2 193357450 199873274 4 7 16 2 0 1 1 3 0.57 0 12 0 0 12 12 12 15 15 15 5.19 2.25 97.65 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.64 1 High confidence EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA Canonical without polyploidization 11 0.34 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 7 NA NA 0 0 16 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.01 NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 9 NA NA 0 0 16 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.32 NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 12 1225327 122193239 1 1 16 0 0 1 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 5.19 0 99.92 0 2 NA Whitelist EOPC-DE 0.62 0.77 NA NA 0.59 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 2 0.06 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 17 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 20 31022109 36158953 1 4 16 2 0 1 0 1 0.3 0 1 0 0 NA NA NA NA NA NA 5.19 0 99.01 0 2 NA Whitelist EOPC-DE 0.68 0 0 0 0.59 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 7 0.22 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-018 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-018 EOPC 0.43 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10829 EOPC-018 male alive C61 no treatment 49 723 723 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.78 EOPC-DE::EOPC-019 1 NA NA 0 0 27 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.07 0 NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 2 11696804 11757513 2 3 27 1 1 0 0 1 0.57 0 1 0 0 NA NA NA NA NA NA 7.15 0.12 99.79 0 2 NA Whitelist EOPC-DE 0.87 0.01 0 0 0.64 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 5 0.09 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 3 72333455 72719383 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.15 0.19 99.63 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 4 179681059 180902417 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.15 0.64 99.35 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 5 94328809 94556859 1 1 27 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 5 5 5 7.15 0.85 99.02 0 1 2 Whitelist EOPC-DE 0.62 0.1 0 NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 6 NA NA 0 0 27 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.88 NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 7 140203010 141216068 1 1 27 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 7.15 0.64 99.14 0 1 2 Whitelist EOPC-DE 0.62 0.17 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 9 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 10 NA NA 0 0 27 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.61 NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 12 9034624 33640479 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.15 18.13 78.13 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 14 26361646 27551540 1 1 27 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 7.15 1.11 97.98 0 2 3 Whitelist EOPC-DE 0.62 0.8 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 15 42273616 43895755 1 1 27 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 7.15 1.58 98.29 0 1 2 Whitelist EOPC-DE 0.62 0.76 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 16 34204937 34261255 1 1 27 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA 4 4 4 7.15 18.02 77.07 0 1 2 Whitelist EOPC-DE 0.62 0.37 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 17 NA NA 0 0 27 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.76 NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 19 NA NA 0 0 27 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.01 NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 21 39807895 42867767 1 1 27 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 7.15 6.36 71 0 1 2 Whitelist EOPC-DE 0.62 0.53 NA NA 0.59 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-019 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-019 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52499 EOPC-019 male alive C61 no treatment 46 744 744 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.47 EOPC-DE::EOPC-021 1 5717619 90237612 5 18 52 2 1 2 0 13 0.53 0 12 0 0 12 12 12 19 19 19 10.97 19.44 80.55 0 1 2 Whitelist EOPC-DE 2 0.87 0 0 0 0.64 1 High confidence EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA Canonical without polyploidization 23 0.22 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 2 55039051 149412025 3 15 52 0 1 1 1 12 0.8 0 10 0 0 10 10 10 11 11 11 10.97 3.71 96.19 0 1 2 Whitelist EOPC-DE 1 0.99 0 0 0 0.84 1 High confidence EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA Canonical without polyploidization 18 0.17 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 3 37166523 53299924 1 2 52 2 0 0 0 0 0.11 0.58 4 NA 0 4 4 4 5 5 5 10.97 2.04 97.95 0 1 2 Whitelist EOPC-DE 0.54 0.81 NA 0 0.48 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 4 NA NA 0 0 52 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.5 NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 5 107611209 109385881 1 1 52 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA 5 3 3 10.97 36.93 62.93 0 0 1 Whitelist EOPC-DE 0.62 0.5 NA NA 0.59 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 6 NA NA 0 0 52 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.62 NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 8 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 9 98540240 99225655 1 1 52 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 10.97 0.49 98.81 0 1 2 Whitelist EOPC-DE 0.62 0.9 NA NA 0.59 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 10 NA NA 0 0 52 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0 0 NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 11 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 12 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 13 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 14 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 17 56367597 57720437 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.97 1.67 98.32 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 18 39661202 47065038 1 10 52 0 0 1 0 9 0.39 0 4 0 0 4 4 4 5 5 5 10.97 2.74 97.22 0 1 2 Whitelist EOPC-DE 1_2 0.96 0 0 0 0.59 1 Linked to high confidence EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA Canonical without polyploidization 11 0.11 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 19 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 20 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-021 X NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-021 EOPC 0.28 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10831 EOPC-021 male alive C61 no treatment 45 1092 1092 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.92 EOPC-DE::EOPC-022 1 100218185 116714122 3 11 46 2 0 1 0 8 0.3 0 6 0 0 6 6 6 9 9 9 7.67 6.65 93.35 0 1 2 Whitelist EOPC-DE 2 0.98 0 0 0 0.59 0 Linked to low confidence EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA Canonical without polyploidization 14 0.15 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 2 25811734 39390809 8 23 46 1 0 2 5 15 0.07 0 4 0 0 4 4 4 5 5 5 7.67 0.87 99.02 0 1 2 Whitelist EOPC-DE 1 0.68 0 0 0 0.48 0 Low confidence EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA Canonical without polyploidization 31 0.34 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 3 70425741 99998322 1 2 46 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 7.67 1.57 98.38 0 1 2 Whitelist EOPC-DE 0.54 0.93 NA 0 0.48 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 4 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 5 64030292 64877067 1 2 46 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 7.67 0.4 99.46 0 1 2 Whitelist EOPC-DE 0.54 1 NA 0 0.48 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 6 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 7 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 8 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 9 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 13 31200149 74306917 1 2 46 1 0 1 0 0 0.57 0.67 2 NA 0 NA NA NA NA NA NA 7.67 39.04 60.96 0 1 2 Whitelist EOPC-DE 0.68 0.88 NA 0 0.64 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 14 36469430 79391715 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.67 0 96.29 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 17 41500056 42783085 1 1 46 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 7.67 1.58 98.42 0 1 2 Whitelist EOPC-DE 0.62 0.32 NA NA 0.59 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 18 55330047 60257320 2 2 46 1 0 1 0 0 0.57 0.35 1 NA 0 NA NA NA NA NA NA 7.67 0 99.96 0 2 NA Whitelist EOPC-DE 0.68 0.6 NA 0 0.64 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 20 NA NA 0 0 46 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.5 NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 21 39862476 42870529 1 2 46 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 7.67 6.25 71.1 0 1 2 Whitelist EOPC-DE 0.54 0.01 0 0 0.48 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 22 17954032 29762175 1 1 46 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 7.67 23.02 76.98 0 1 2 Whitelist EOPC-DE 0.62 0.67 NA NA 0.59 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-022 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-022 EOPC 0.34 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10833 EOPC-022 male alive C61 no treatment 49 1443 1443 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.47 EOPC-DE::EOPC-023 1 94906268 112464423 2 3 40 1 1 0 0 1 0.57 0.24 2 0 0 NA NA NA NA NA NA 8.16 8.13 91.86 0 1 2 Whitelist EOPC-DE 0.87 0.48 0 0 0.64 0 High confidence EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA Canonical without polyploidization 5 0.06 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA False negative; manually included EOPC-DE::EOPC-023 2 NA NA 0 0 40 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.5 NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 3 61084383 62014304 1 1 40 0 1 0 0 0 0.39 0.76 2 0 NA NA NA NA 5 5 5 8.16 16.74 80.03 0 1 2 Whitelist EOPC-DE 0.62 0.92 0 NA 0.59 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 4 135271829 162650138 5 5 40 1 1 2 1 0 0.9 0.19 5 0 0 5 4 5 6 4 6 8.16 0.14 99.85 0 1 2 Whitelist EOPC-DE 0.93 0.41 0 0 0.92 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 10 0.12 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 5 53801297 64200101 2 3 40 1 1 0 0 1 0.57 0.1 5 0 0 5 5 5 9 9 9 8.16 10.14 89.71 0 1 2 Whitelist EOPC-DE 0.87 0.27 0 0 0.64 0 High confidence EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA Canonical without polyploidization 5 0.06 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA False negative; manually included EOPC-DE::EOPC-023 6 92024358 139947952 2 2 40 1 1 0 0 0 0.57 0.09 1 0 0 NA NA NA NA NA NA 8.16 0.03 99.82 0 2 NA Whitelist EOPC-DE 0.68 0.25 0 0 0.64 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 4 0.05 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 7 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 8 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 9 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 10 44790580 45127664 1 1 40 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.16 0 99.83 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 11 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 13 111333221 111695915 1 1 40 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 8.16 0.31 85.53 0 1 2 Whitelist EOPC-DE 0.62 0.65 NA NA 0.59 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 16 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 17 40099192 42191256 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 8.16 29.9 65.65 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 18 43257443 44359875 1 1 40 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 5 5 5 8.16 1.69 98.27 0 1 2 Whitelist EOPC-DE 0.62 0.54 NA NA 0.59 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 20 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 21 39831660 43517769 12 14 40 3 4 3 2 2 0.88 0 4 0 0 4 0 3 4 0 3 8.16 0.08 77.27 0 2 0 Whitelist EOPC-DE 0.9 0 0 0 0.91 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 26 0.32 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 22 NA NA 0 0 40 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.23 NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-023 X NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-023 EOPC 0.25 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52500 EOPC-023 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 4 NA NA 0 0 8 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.68 NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 6 75927960 125111331 1 3 8 2 0 0 0 1 0.11 0.01 2 NA 0 NA NA NA NA NA NA 5.69 8.55 91.3 0 1 2 Whitelist EOPC-DE 0.62 0.05 NA 0 0.48 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 5 0.31 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 8 NA NA 0 0 8 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.59 NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 14 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.09 NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 19 NA NA 0 0 8 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.05 NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 20 NA NA 0 0 8 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.37 NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 21 39837209 42868328 1 1 8 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 5.69 6.3 71.06 0 1 2 Whitelist EOPC-DE 0.62 0.26 NA NA 0.59 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 2 0.12 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-024 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-024 EOPC 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10835 EOPC-024 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-025 1 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 2 74935145 147559558 1 1 23 0 0 0 1 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 9.43 0 99.9 0 2 NA Whitelist EOPC-DE 0.62 0.9 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 3 176460186 178075689 1 1 23 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.43 0 99.86 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 4 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 5 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 6 NA NA 0 0 23 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.86 NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 7 86763557 113055021 1 3 23 1 0 0 1 1 0.57 0.01 3 0 0 NA NA NA 5 5 5 9.43 1.07 98.71 0 2 1 Whitelist EOPC-DE 0.87 0.03 0 0 0.64 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 5 0.11 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 8 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 9 130993784 131408207 1 1 23 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 9.43 0.29 99.54 0 1 2 Whitelist EOPC-DE 0.62 0.82 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 10 93741569 94470254 1 1 23 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.43 0.54 99.28 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 11 NA NA 0 0 23 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.25 NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 12 79144473 80331878 2 3 23 0 0 1 1 1 0.57 0.02 2 0 0 NA NA NA 4 4 4 9.43 24.12 75.79 0 1 2 Whitelist EOPC-DE 0.87 0.08 0 0 0.64 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 5 0.11 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 13 30306992 105694500 1 2 23 1 0 0 1 0 0.57 0.19 1 NA 0 NA NA NA NA NA NA 9.43 0 100 0 2 NA Whitelist EOPC-DE 0.68 0.41 NA 0 0.64 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 4 0.09 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 14 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 16 48372373 66308428 1 1 23 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA 5 5 5 9.43 20.06 79.93 0 1 2 Whitelist EOPC-DE 0.62 0.71 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 17 7174056 8091739 1 1 23 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 9.43 1.13 98.87 0 1 2 Whitelist EOPC-DE 0.62 0.71 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 18 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 19 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 20 35847221 36964094 1 1 23 0 0 0 1 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 9.43 0 99.03 0 2 NA Whitelist EOPC-DE 0.62 0.06 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 21 39815153 42870429 1 1 23 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 9.43 6.35 71 0 1 2 Whitelist EOPC-DE 0.62 0.02 NA NA 0.59 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-025 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-025 EOPC 0.53 1.88 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52501 EOPC-025 male alive C61 no treatment 47 201 201 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 6.61 EOPC-DE::EOPC-029 1 NA NA 0 0 90 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.16 NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 2 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 3 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 4 1680130 1705634 1 1 90 1 0 0 0 0 0.39 0.53 1 0.01 NA NA NA NA NA NA NA 13.82 0 99.8 0 2 NA Whitelist EOPC-DE 0.62 0.76 0.01 NA 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 2 0.01 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 5 73176576 75313403 1 2 90 1 0 0 0 1 0.39 0.13 2 NA NA NA NA NA 5 5 5 13.82 1.55 98.33 0 1 2 Whitelist EOPC-DE 0.68 0.32 NA NA 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 3 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 6 58066536 96337295 1 2 90 2 0 0 0 0 0.11 0.18 3 NA 0 NA NA NA NA NA NA 13.82 5.34 94.53 0 2 1 Whitelist EOPC-DE 0.54 0.4 NA 0 0.48 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 4 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 7 147934802 148103974 1 1 90 1 0 0 0 0 0.39 1 3 0 NA NA NA NA 4 0 3 13.82 99.7 0.08 0 1 2 Whitelist EOPC-DE 0.62 1 0 NA 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 2 0.01 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 8 110210888 112211586 5 16 90 0 1 1 3 11 0.28 0 6 0 0 6 6 6 16 13 13 13.82 0.62 99.37 0 1 2 Whitelist EOPC-DE 11 0.79 0 0 0 0.59 1 Linked to high confidence EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA Canonical without polyploidization 21 0.12 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 9 NA NA 0 0 90 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.38 0 NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 10 54338032 54348650 1 1 90 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 13.82 0.01 99.82 0 1 2 Whitelist EOPC-DE 0.62 0.95 NA NA 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 2 0.01 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 11 96486263 98959029 4 20 90 1 1 1 1 16 1 0 19 0 0 19 19 19 23 23 23 13.82 0.43 99.15 0 2 1 Whitelist EOPC-DE 0.96 0 0 0 1 1 High confidence EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA Canonical without polyploidization 24 0.13 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 12 105187153 105281429 2 2 90 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 7 5 5 13.82 0.84 99.08 0 2 NA Whitelist EOPC-DE 0.68 0 0 0 0.64 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 4 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 13 71833975 93951745 1 4 90 3 1 0 0 0 0.11 0.56 8 0 0 8 6 8 9 7 7 13.82 8.59 91.41 0 2 1 Whitelist EOPC-DE 0.54 0.78 0 0 0.48 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 8 0.04 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 14 36081876 36115174 1 3 90 1 0 0 0 2 0.39 0.76 4 NA 0 4 4 4 5 5 5 13.82 0.02 99.06 0 1 2 Whitelist EOPC-DE 0.87 0.93 NA 0 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 4 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 16 71521259 88317109 2 2 90 1 0 0 1 0 0.57 0.09 4 0 0 4 4 4 5 5 5 13.82 7.21 92.7 0 1 2 Whitelist EOPC-DE 0.68 0.26 0 0 0.64 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 4 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 17 1778279 79601482 1 10 90 3 0 1 0 6 0.11 0 2 0 0 NA NA NA NA NA NA 13.82 7.59 92.41 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.48 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 14 0.08 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 19 NA NA 0 0 90 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.89 NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 20 5309911 6413668 1 1 90 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.82 0 99.03 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 2 0.01 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 21 39859986 42874541 1 3 90 1 0 0 0 2 0.39 0.1 1 NA 0 NA NA NA NA NA NA 13.82 0 77.35 0 2 NA Whitelist EOPC-DE 0.87 0.26 NA 0 0.59 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 4 0.02 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 22 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-029 X NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-029 EOPC 0.42 1.98 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52504 EOPC-029 male alive C61 radiation therapy unknown 48 1353 1353 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 44.51 EOPC-DE::EOPC-03 1 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 2 29693633 59779820 1 1 34 1 0 0 0 0 0.39 0.36 4 NA NA 4 3 4 5 3 3 15.71 12.37 87.62 0 1 0 Whitelist EOPC-DE 0.62 0.61 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 3 59400342 59931556 1 1 34 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 5 15.71 0.42 96.5 0 2 3 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 4 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 6 53517848 53545572 1 1 34 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 4 3 4 15.71 0.02 97.05 0 1 2 Whitelist EOPC-DE 0.62 0.7 0 NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 7 NA NA 0 0 34 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.9 NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 8 31977057 64133271 1 1 34 0 0 0 1 0 0.39 1 3 NA NA NA NA NA 7 0 4 15.71 72.79 23.78 0 2 3 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 9 87649705 87686031 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.71 0.03 99.83 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 10 NA NA 0 0 34 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.02 0 NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 11 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 12 99973768 100435227 1 1 34 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 15.71 0.34 95.98 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 13 28047459 57690299 1 1 34 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.71 20.76 65.09 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 15 25210089 83493510 5 12 34 1 1 1 2 7 0.9 0 6 0 0 6 4 6 6 4 6 15.71 1 83.59 0 2 3 Whitelist EOPC-DE 0.93 0 0 0 0.92 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 17 0.25 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 16 NA NA 0 0 34 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.82 NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 17 39844534 73975314 1 5 34 1 0 0 0 4 0.39 0 1 0 0 NA NA NA NA NA NA 15.71 0 99.99 0 2 NA Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 6 0.09 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 18 NA NA 0 0 34 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.47 NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 20 37275782 37465944 1 1 34 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 5 5 5 15.71 0.34 98.68 0 1 2 Whitelist EOPC-DE 0.62 0.38 NA NA 0.59 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-03 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-03 EOPC 0.29 1.96 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10809 EOPC-03 male alive C61 radiation therapy disease progression 46 393 393 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 12.93 EOPC-DE::EOPC-030 1 205640750 244701110 1 3 116 0 1 1 0 1 0.57 0.22 3 0 0 NA NA NA NA NA NA 16.13 0.3 99.7 0 2 3 Whitelist EOPC-DE 0.62 0.46 0 0 0.64 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 5 0.02 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 2 56761021 136085580 1 2 116 0 2 0 0 0 0.11 0.13 2 0 0 NA NA NA NA NA NA 16.13 0.09 99.9 0 2 3 Whitelist EOPC-DE 0.54 0.32 0 0 0.48 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 4 0.02 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 3 NA NA 0 0 116 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.99 0 NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 4 NA NA 0 0 116 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.03 NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 5 107251307 150164094 1 2 116 2 0 0 0 0 0.11 0.12 1 NA 0 NA NA NA NA NA NA 16.13 0 99.88 0 2 NA Whitelist EOPC-DE 0.54 0.31 NA 0 0.48 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 4 0.02 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 6 NA NA 0 0 116 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.05 NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 7 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 8 16846286 37417753 2 9 116 2 0 0 0 7 0.11 0 5 0 0 5 5 5 9 8 9 16.13 75.7 20.37 0 1 2 Whitelist EOPC-DE 12 0.85 0 0 0 0.48 1 Linked to low confidence EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA Canonical without polyploidization 11 0.05 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 9 NA NA 0 0 116 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.84 NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 10 NA NA 0 0 116 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 14 7 7 0 0 0 0 0 0 Whitelist EOPC-DE NA 0 0 NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 11 70358348 117056058 21 38 116 6 5 5 5 17 0.99 0 7 0 0 7 7 7 9 9 9 16.13 1.84 97.6 0 1 2 Whitelist EOPC-DE 15 0.95 0 0 0 1 1 High confidence EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA Canonical without polyploidization 59 0.25 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 12 9146108 106049040 7 21 116 2 2 3 0 14 0.44 0 12 0 0 12 5 12 13 6 13 16.13 39.15 60.77 0 2 1 Whitelist EOPC-DE 0.76 0 0 0 0.64 1 Low confidence EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA With other complex events 28 0.12 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 13 22615390 105145326 12 12 116 5 1 3 3 0 0.45 0 11 0 0 11 6 11 11 6 6 16.13 8.77 77.07 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.64 1 Low confidence EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA With other complex events 24 0.1 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 14 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 15 45489848 50514324 4 21 116 1 0 1 2 17 0.57 0 8 0 0 8 8 8 10 10 10 16.13 8.93 75.66 0 1 2 Whitelist EOPC-DE 1 0 0 0 0.64 1 High confidence EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA Canonical without polyploidization 25 0.11 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 16 NA NA 0 0 116 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.63 NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 17 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 18 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 19 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 20 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 21 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 22 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-030 X NA NA 0 0 116 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.12 NA NA NA 1 No EOPC-DE EOPC-030 EOPC 0.67 1.97 Prost-AdenoCA NA 0 0 NA 3 EOPC-DE DO52505 EOPC-030 male alive C61 no treatment 48 423 423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.91 EOPC-DE::EOPC-031 1 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 2 166247539 166615873 1 1 54 0 0 0 1 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 92.4 99.89 0 0 4 NA Whitelist EOPC-DE 0.62 0.24 NA NA 0.59 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 3 NA NA 0 0 54 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.81 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 4 47653743 177803328 1 8 54 1 0 3 0 4 0.11 0.01 4 0 0 4 4 4 5 5 5 92.4 97.63 0 0 3 4 Whitelist EOPC-DE 0.62 0.04 0 0 0.48 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 12 0.11 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 5 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 6 NA NA 0 0 54 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.93 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 7 NA NA 0 0 54 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 8 42115825 42827554 1 1 54 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 3 92.4 99.89 0 0 4 6 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 9 NA NA 0 0 54 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.9 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 10 NA NA 0 0 54 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 5 8 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.02 0 NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 11 NA NA 0 0 54 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.76 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 12 NA NA 0 0 54 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 7 3 6 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.28 0 NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 13 39984261 90665186 7 7 54 3 1 1 2 0 0.67 0 3 0 0 NA NA NA 4 3 3 92.4 97.22 0 0 4 7 Whitelist EOPC-DE 0.77 0 0 0 0.74 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 14 0.13 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 14 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 15 42131275 59787923 5 7 54 2 2 0 1 2 0.53 0 3 0 0 NA NA NA 6 6 6 92.4 95.22 0 0 4 3 Whitelist EOPC-DE 0.77 0 0 0 0.64 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 12 0.11 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 16 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 17 NA NA 0 0 54 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.07 NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 18 33289885 33528803 1 1 54 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 3 3 92.4 81.98 17.98 0 3 4 Whitelist EOPC-DE 0.62 0.87 NA NA 0.59 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 19 51605413 52496440 1 1 54 0 0 0 1 0 0.39 0 3 0 NA NA NA NA 11 4 5 92.4 79.06 13.67 0 3 4 Whitelist EOPC-DE 0.62 0 0 NA 0.59 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 21 19047847 42838215 3 5 54 0 0 2 1 2 0.3 0 7 0 0 7 4 6 13 4 4 92.4 71.21 6.15 0 3 2 Whitelist EOPC-DE 0.68 0 0 0 0.59 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 8 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-031 X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-031 EOPC 0.51 3.51 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 EOPC-DE DO52506 EOPC-031 male alive C61 other therapy stable disease 48 402 402 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 13.22 EOPC-DE::EOPC-033 1 26912898 27074790 1 1 31 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.9 0 100 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 2 11183107 64231178 1 4 31 2 0 0 0 2 0.11 0.04 4 0.27 0 4 4 4 5 5 5 10.9 2.09 97.8 0 1 2 Whitelist EOPC-DE 0.21 0.14 0.27 0 0.48 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 6 0.1 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 3 71111647 72873340 1 1 31 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 10.9 0.89 98.99 0 1 2 Whitelist EOPC-DE 0.62 0.9 NA NA 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 4 6864765 7001259 1 3 31 0 0 0 1 2 0.39 0.15 1 0 0 NA NA NA NA NA NA 10.9 0 100 0 2 NA Whitelist EOPC-DE 0.62 0.35 0 0 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 4 0.06 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 5 14970444 54777981 3 4 31 0 0 2 1 1 0.3 0 4 0 0 4 3 4 8 3 6 10.9 28.76 68.56 0 3 2 Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 7 0.11 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 6 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 7 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 8 17428685 141398923 1 2 31 2 0 0 0 0 0.11 0.67 4 NA 0.01 4 4 4 5 5 5 10.9 6.91 93.09 0 1 2 Whitelist EOPC-DE 0.54 0.87 NA 0.01 0.48 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 4 0.06 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 9 97192859 97250970 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.9 0.04 99.82 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 10 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 11 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 12 NA NA 0 0 31 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.86 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 13 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 14 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 15 NA NA 0 0 31 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.05 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 16 NA NA 0 0 31 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.01 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 17 NA NA 0 0 31 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.43 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 18 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.79 NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 20 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 21 39873725 42873107 1 1 31 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 4 3 3 10.9 6.76 62 0 1 2 Whitelist EOPC-DE 0.62 0.57 NA NA 0.59 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-033 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-033 EOPC 0.5 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52508 EOPC-033 male alive C61 no treatment 43 1113 1113 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.61 EOPC-DE::EOPC-04 1 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 2 195220516 208358437 1 2 57 1 0 1 0 0 0.57 0.24 2 NA 0 NA NA NA NA NA NA 7.59 0.08 99.83 0 1 2 Whitelist EOPC-DE 0.68 0.47 NA 0 0.64 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 3 28928651 71111532 1 8 57 0 0 2 0 6 0.11 0 6 0 0 6 4 6 13 10 10 7.59 4.33 95.62 3 1 2 Whitelist EOPC-DE 0.87 0.01 0 0 0.48 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 10 0.09 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 4 NA NA 0 0 57 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.94 NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 5 150165127 155462094 1 1 57 0 0 1 0 0 0.39 0.41 2 0 0 NA NA NA 7 7 7 7.59 4.31 95.55 0 1 2 Whitelist EOPC-DE 0.62 0.65 0 0 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 6 11027859 23710261 7 8 57 3 0 2 2 1 0.44 0 3 0 0 NA NA NA 7 7 7 7.59 3.96 95.89 1 2 1 Whitelist EOPC-DE 0.62 0 0 0 0.64 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 15 0.13 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 7 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 8 32202563 32900695 1 2 57 0 0 0 1 1 0.39 0.07 3 0 NA NA NA NA 9 9 9 7.59 1.84 98.15 0 2 1 Whitelist EOPC-DE 0.68 0.21 0 NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 3 0.03 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 9 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 10 73892640 90592541 1 1 57 1 0 0 0 0 0.39 1 5 NA NA 5 4 5 6 4 5 7.59 12.32 87.5 0 0 1 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 11 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 12 21261815 130526470 1 4 57 1 0 1 1 1 0.8 0.34 6 0 0 6 6 6 7 7 7 7.59 18.93 80.98 0 1 2 Whitelist EOPC-DE 0.68 0.59 0 0 0.84 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 7 0.06 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 13 23880556 112574975 1 3 57 1 0 0 0 2 0.39 0.45 6 NA 0 6 6 6 7 7 7 7.59 4.04 95.96 0 1 2 Whitelist EOPC-DE 0.62 0.69 NA 0 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 14 66991555 73350921 5 5 57 3 1 1 0 0 0.28 0.03 7 0 0 7 7 7 7 7 7 7.59 5.17 93.92 0 2 1 Whitelist EOPC-DE 0.62 0.12 0 0 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 10 0.09 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 15 67218253 67487104 1 1 57 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.59 0.26 99.63 0 2 3 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 16 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 18 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 19 12373365 12525535 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.59 0.26 99.57 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 21 42874529 43209522 1 1 57 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 7.59 0 77.35 0 2 NA Whitelist EOPC-DE 0.62 0.12 NA NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 22 46534904 46777501 1 2 57 0 0 1 0 1 0.39 0 1 0 NA NA NA NA NA NA NA 7.59 0.24 99.76 0 2 NA Whitelist EOPC-DE 0.54 0 0 NA 0.59 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 3 0.03 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-04 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-04 EOPC 0.58 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10811 EOPC-04 male alive C61 radiation therapy unknown 51 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 8.98 EOPC-DE::EOPC-041 1 65627428 167288024 7 7 131 2 1 2 2 0 0.93 0.62 5 0 0 5 3 4 6 3 5 75.94 99.89 0.11 0 3 1 Whitelist EOPC-DE 0.96 0.84 0 0 0.95 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 2 20591505 103430435 16 36 131 4 4 4 4 20 1 0 25 0 0 25 5 9 28 5 11 75.94 93.38 6.51 0 4 2 Whitelist EOPC-DE 19 0.93 0 0 0 1 0 Low confidence EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA With other complex events 52 0.2 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 3 22685414 116664106 1 5 131 2 0 0 1 2 0.3 0.39 10 0 0 10 4 10 11 4 11 75.94 98.8 1.06 0 2 4 Whitelist EOPC-DE 0.93 0.64 0 0 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 4 NA NA 0 0 131 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.17 NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 5 50370846 77423655 3 7 131 1 0 1 1 4 0.8 0.47 7 0 0 7 4 7 13 10 10 75.94 56.88 42.98 0 2 4 Whitelist EOPC-DE 0.62 0.71 0 0 0.84 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 6 71258159 79594994 4 4 131 1 1 1 1 0 1 0.36 6 0 0 6 6 6 9 7 9 75.94 97.48 2.27 0 2 3 Whitelist EOPC-DE 1 0.61 0 0 1 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 7 69035173 69225413 1 1 131 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 9 6 6 75.94 99.78 0 0 5 6 Whitelist EOPC-DE 0.62 1 0 NA 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 8 14804569 76501181 14 15 131 5 2 3 4 1 0.7 0 33 0 0 33 4 9 42 4 9 75.94 90.37 9.62 6 2 5 Whitelist EOPC-DE 0.93 0 0 0 0.78 0 Low confidence EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA With other complex events 29 0.11 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 9 17303799 72916114 1 4 131 2 0 0 0 2 0.11 0.65 5 0 0 5 3 5 5 3 5 75.94 99.87 0 0 3 1 Whitelist EOPC-DE 0.68 0.86 0 0 0.48 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 10 70661921 105685142 3 3 131 0 1 1 1 0 0.8 0.29 7 0 0 7 4 7 11 6 6 75.94 99.83 0 0 1 3 Whitelist EOPC-DE 0.87 0.54 0 0 0.84 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 11 15594630 16952242 1 1 131 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 75.94 99.68 0 0 3 6 Whitelist EOPC-DE 0.62 0.26 NA NA 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 12 11722456 15685685 1 1 131 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 75.94 97.02 2.96 0 2 4 Whitelist EOPC-DE 0.62 0.12 NA NA 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 13 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 14 48602628 48930839 1 1 131 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 4 75.94 70.11 28.98 0 4 6 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 15 NA NA 0 0 131 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.81 NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 16 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 17 17444508 17458409 1 1 131 0 0 0 1 0 0.39 0.09 2 0 NA NA NA NA 11 3 3 75.94 73.25 21.49 0 2 6 Whitelist EOPC-DE 0.62 0.26 0 NA 0.59 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 18 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 19 42614927 44488345 8 30 131 2 1 2 3 22 0.8 0 15 0 0 15 6 9 15 6 9 75.94 99.81 0.01 0 3 1 Whitelist EOPC-DE 2 0.93 0 0 0 0.84 0 Low confidence EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA With other complex events 38 0.15 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 20 NA NA 0 0 131 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 21 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 22 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-041 X NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-041 EOPC 0.44 3.28 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 EOPC-DE DO52516 EOPC-041 male deceased C61 other therapy disease progression 48 327 327 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 10.76 EOPC-DE::EOPC-048 1 31193900 235255748 1 2 57 2 0 0 0 0 0.11 0.32 4 NA 0.01 4 4 4 5 5 5 10.72 3.74 96.26 0 1 2 Whitelist EOPC-DE 0.54 0.57 NA 0.01 0.48 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 2 7534509 25778227 3 5 57 2 1 0 0 2 0.3 0 1 0 0 NA NA NA 9 6 6 10.72 20.31 79.6 0 2 NA Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 8 0.07 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 3 51262110 88194243 1 2 57 2 0 0 0 0 0.11 0.44 3 NA 0 NA NA NA NA NA NA 10.72 17.32 79.51 0 2 1 Whitelist EOPC-DE 0.54 0.69 NA 0 0.48 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 4 95678239 96075417 1 1 57 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.72 0 99.78 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 5 59032535 167666852 2 2 57 0 0 1 1 0 0.57 0.78 3 0 0 NA NA NA NA NA NA 10.72 1.12 98.74 0 2 1 Whitelist EOPC-DE 0.68 0.94 0 0 0.64 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 6 NA NA 0 0 57 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.81 NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 7 12665476 14561491 1 1 57 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 3 3 10.72 1.27 98.7 0 1 2 Whitelist EOPC-DE 0.62 0.62 NA NA 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 8 17778860 17940505 1 1 57 0 0 1 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 10.72 16.73 79.17 0 1 NA Whitelist EOPC-DE 0.62 0.62 NA NA 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 9 72433818 105654217 1 2 57 0 0 0 1 1 0.39 0.49 3 NA NA NA NA NA 5 5 5 10.72 24.56 75.27 0 2 1 Whitelist EOPC-DE 0.68 0.73 NA NA 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 3 0.03 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 10 26287689 92912243 1 1 57 0 0 1 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 10.72 0 99.93 0 2 NA Whitelist EOPC-DE 0.62 0.76 NA NA 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 11 94354476 114634580 1 1 57 1 0 0 0 0 0.39 0.75 2 0 0 NA NA NA NA NA NA 10.72 15.02 84.74 0 1 2 Whitelist EOPC-DE 0.62 0.92 0 0 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 12 25548605 125421349 2 2 57 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 10.72 0 99.92 0 2 NA Whitelist EOPC-DE 0.68 0.16 0 0 0.64 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 4 0.04 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 14 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 15 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.88 NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 16 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 17 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.87 NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 18 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.87 NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 19 1492648 58525108 1 10 57 2 0 0 0 8 0.11 0 6 0 0 6 6 6 7 7 7 10.72 4.1 94.7 0 1 2 Whitelist EOPC-DE 0.86 0 0 0 0.48 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 12 0.11 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 21 38464197 42871885 3 11 57 2 1 0 0 8 0.3 0 3 0 0 NA NA NA NA NA NA 10.72 0.07 77.28 0 2 1 Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 14 0.12 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-048 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-048 EOPC 0.48 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52518 EOPC-048 male alive C61 no treatment 50 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-049 1 NA NA 0 0 50 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.4 NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 2 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 3 28526156 138752152 2 8 50 0 1 1 0 6 0.57 0 4 0 0 4 4 4 7 7 7 7.74 3.26 96.69 0 1 2 Whitelist EOPC-DE 10 0.62 0 0 0 0.64 0 Linked to low confidence EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA Canonical without polyploidization 10 0.1 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 4 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 5 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 6 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 7 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 8 NA NA 0 0 50 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.76 NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 9 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 10 129911442 133833453 8 19 50 4 1 1 2 11 0.39 0 4 0 0 4 4 4 5 5 5 7.74 2.11 97.7 0 1 2 Whitelist EOPC-DE 0.62 0 0 0 0.59 0 Low confidence EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA Canonical without polyploidization 27 0.27 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 11 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 12 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 13 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 14 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 15 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 16 78773728 80876106 1 1 50 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 3 7.74 16.23 83.76 0 0 1 Whitelist EOPC-DE 0.62 0.01 0 NA 0.59 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 17 9331003 17690982 5 6 50 0 1 1 3 1 0.28 0 4 0 0 4 4 4 4 4 4 7.74 15.42 84.56 1 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.59 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 11 0.11 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 18 NA NA 0 0 50 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.64 NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 19 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 20 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 21 39885459 42877901 2 5 50 1 0 1 0 3 0.57 0 1 0 0 NA NA NA NA NA NA 7.74 17.13 60.22 0 1 NA Whitelist EOPC-DE 0.93 0 0 0 0.64 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 7 0.07 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 22 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-049 X 52897784 55385946 1 8 50 0 0 2 0 6 0.11 0 1 0 0 NA NA NA NA NA NA 7.74 100 0 0 1 NA Whitelist EOPC-DE 10 0.87 0.01 0 0 0.48 0 Linked to low confidence EOPC-DE EOPC-049 EOPC 0.68 1.9 Prost-AdenoCA With other complex events 10 0.1 NA 2 EOPC-DE DO52520 EOPC-049 male alive C61 no treatment 48 1095 1095 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.02 EOPC-DE::EOPC-05 1 13953003 14271627 1 1 35 0 0 0 1 0 0.39 0.35 2 NA NA NA NA NA 7 7 7 11.22 14.24 85.76 0 1 2 Whitelist EOPC-DE 0.62 0.6 NA NA 0.59 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 2 NA NA 0 0 35 0 0 0 0 0 NA 0.21 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.44 0 NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 3 170624598 184650097 1 1 35 1 0 0 0 0 0.39 0.73 3 NA NA NA NA NA 7 7 7 11.22 3.15 96.68 0 1 2 Whitelist EOPC-DE 0.62 0.91 NA NA 0.59 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 6 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 8 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 9 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 10 62179595 113150147 3 14 35 0 2 1 0 11 0.3 0 4 0 0 4 4 4 5 5 5 11.22 47.06 52.76 0 1 2 Whitelist EOPC-DE 12 0.81 0 0 0 0.59 1 Linked to high confidence EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA Canonical without polyploidization 17 0.24 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 12 20367968 117498112 7 16 35 2 1 3 1 9 0.67 0 13 0 0 13 13 13 13 13 13 11.22 8.86 91.06 0 2 1 Whitelist EOPC-DE 0.95 0 0 0 0.74 1 High confidence EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA Canonical without polyploidization 23 0.33 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 13 30909657 93505068 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.22 54.35 45.65 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 14 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 19 NA NA 0 0 35 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.35 NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-05 X 64744160 65972114 1 1 35 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.22 99.21 0.79 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-05 EOPC 0.42 1.87 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO10813 EOPC-05 male alive C61 no treatment 50 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-051 1 36401460 75112849 1 4 13 0 0 0 1 3 0.39 0 3 0 0 NA NA NA NA NA NA 5.03 0.74 99.26 0 2 1 Whitelist EOPC-DE 0.68 0.01 0 0 0.59 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 5 0.19 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 2 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 3 132045127 170072985 1 4 13 1 0 0 0 3 0.39 0 1 0 0 NA NA NA NA NA NA 5.03 0 99.86 0 2 NA Whitelist EOPC-DE 0.68 0.01 0 0 0.59 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 5 0.19 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 6 158675995 160610123 1 3 13 0 0 1 0 2 0.39 0.04 3 NA 0 NA NA NA 5 5 5 5.03 0.19 99.57 0 1 2 Whitelist EOPC-DE 0.62 0.14 NA 0 0.59 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 4 0.15 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 11 NA NA 0 0 13 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.31 NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 13 41634673 75541620 1 4 13 2 0 0 0 2 0.11 0 1 0 0 NA NA NA NA NA NA 5.03 0 85.73 0 2 NA Whitelist EOPC-DE 0.54 0.01 0 0 0.48 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 6 0.23 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 20 44363619 44487513 1 1 13 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 5.03 0.2 98.83 0 1 2 Whitelist EOPC-DE 0.62 0.49 NA NA 0.59 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 2 0.08 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-051 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-051 EOPC 0.29 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52522 EOPC-051 male alive C61 no treatment 41 1449 1449 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 47.66 EOPC-DE::EOPC-052 1 96166189 166428642 1 2 13 2 0 0 0 0 0.11 0.08 4 NA 0 4 4 4 5 5 5 8.53 1.37 98.63 0 1 2 Whitelist EOPC-DE 0.54 0.22 NA 0 0.48 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 4 0.15 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 2 187174928 189277923 1 1 13 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.53 0 99.89 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 2 0.08 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 3 70510361 74891737 2 3 13 0 0 1 1 1 0.57 0 1 0 0 NA NA NA 5 5 5 8.53 2.25 97.6 0 2 NA Whitelist EOPC-DE 0.87 0.01 0 0 0.64 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 5 0.19 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 9 NA NA 0 0 13 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.65 NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 12 NA NA 0 0 13 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.71 NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 16 84382247 88832239 1 3 13 0 0 1 0 2 0.39 0 1 NA 0 NA NA NA NA NA NA 8.53 0 99.89 0 2 NA Whitelist EOPC-DE 0.62 0.02 NA 0 0.59 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 4 0.15 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 17 NA NA 0 0 13 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.16 NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 21 39912474 42870163 1 1 13 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 8.53 6.15 71.21 0 1 2 Whitelist EOPC-DE 0.62 0.35 NA NA 0.59 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 2 0.08 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-052 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-052 EOPC 0.2 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52524 EOPC-052 male alive C61 no treatment 40 27 27 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 0.89 EOPC-DE::EOPC-053 1 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 2 13149491 101620866 4 5 43 0 1 1 2 1 0.57 0.03 3 0 0 NA NA NA NA NA NA 9.1 0.01 99.88 0 2 1 Whitelist EOPC-DE 0.68 0.1 0 0 0.64 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 9 0.1 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 3 40605792 72921776 2 2 43 0 0 1 1 0 0.57 0.77 4 NA 0 4 4 4 5 5 5 9.1 2.24 97.63 0 1 2 Whitelist EOPC-DE 0.68 0.93 NA 0 0.64 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 4 0.05 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 4 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 5 145151956 145861885 1 1 43 0 0 0 1 0 0.39 0.02 2 0 NA NA NA NA 5 5 5 9.1 0.46 99.4 0 1 2 Whitelist EOPC-DE 0.62 0.07 0 NA 0.59 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 6 116559572 117847692 1 1 43 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA 6 6 6 9.1 35.01 61.7 0 1 2 Whitelist EOPC-DE 0.62 0.91 NA NA 0.59 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 8 NA NA 0 0 43 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.08 0 NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 16 70835447 73495966 2 2 43 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 5 4 5 9.1 3.27 96.55 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.64 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 4 0.05 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 17 50997897 79055514 1 5 43 1 0 1 0 3 0.57 0 4 0 0 4 4 4 9 9 9 9.1 1.3 98.7 0 1 2 Whitelist EOPC-DE 0.62 0 0 0 0.64 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 7 0.08 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 18 NA NA 0 0 43 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.03 NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 19 NA NA 0 0 43 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.01 NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 21 NA NA 0 0 43 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.66 NA NA NA 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 22 31874110 43561215 1 6 43 0 0 1 1 4 0.57 0 6 0 0 6 6 6 7 7 7 9.1 9.58 90.42 0 1 2 Whitelist EOPC-DE 17 0.62 0 0 0 0.64 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 8 0.09 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-053 X 111563221 111610582 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 9.1 100 0 0 1 NA Whitelist EOPC-DE 0.62 0.9 NA NA 0.59 0 No EOPC-DE EOPC-053 EOPC 0.28 1.89 Prost-AdenoCA NA 2 0.02 NA 2 EOPC-DE DO52526 EOPC-053 male alive C61 no treatment 48 399 399 Smoking history not documented NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 13.12 EOPC-DE::EOPC-054 1 NA NA 0 0 18 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.16 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 2 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 3 143178651 143403636 1 1 18 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 5.18 0 99.86 0 2 NA Whitelist EOPC-DE 0.62 0.62 NA NA 0.59 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 2 0.06 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 4 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 5 NA NA 0 0 18 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.56 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 7 NA NA 0 0 18 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.06 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 8 102547307 102597811 1 2 18 0 0 0 1 1 0.39 0.06 1 NA NA NA NA NA NA NA NA 5.18 0 99.99 0 2 NA Whitelist EOPC-DE 0.68 0.19 NA NA 0.59 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 3 0.08 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 11 NA NA 0 0 18 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.43 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 13 75092635 75219482 1 1 18 0 0 1 0 0 0.39 0.47 1 NA NA NA NA NA NA NA NA 5.18 0 85.72 0 2 NA Whitelist EOPC-DE 0.62 0.71 NA NA 0.59 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 2 0.06 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 16 30069744 30985230 1 3 18 1 0 1 1 0 0.8 0 3 0 0 NA NA NA 5 5 5 5.18 2.14 97.75 0 2 1 Whitelist EOPC-DE 0.87 0.01 0 0 0.84 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 6 0.17 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 17 41572134 43659900 1 1 18 0 0 1 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 5.18 3.13 96.87 0 1 NA Whitelist EOPC-DE 0.62 0.64 NA NA 0.59 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 2 0.06 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 20 NA NA 0 0 18 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.58 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 22 NA NA 0 0 18 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.08 NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-054 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-054 EOPC 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52528 EOPC-054 male alive C61 no treatment 50 690 690 Current reformed smoker for <= 15 years NA yes Occassional Drinker (< once a month) Included Prost-AdenoCA EOPC DE 1 22.7 EOPC-DE::EOPC-056 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 2 NA NA 0 0 8 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.75 NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 3 NA NA 0 0 8 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.27 NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 4 NA NA 0 0 8 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.68 NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 5 73344433 73390789 1 1 8 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 5.87 0.03 99.84 0 1 2 Whitelist EOPC-DE 0.62 0.65 NA NA 0.59 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 2 0.12 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 12 NA NA 0 0 8 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.57 NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 17 56799169 57500679 1 1 8 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 5.87 0.86 99.12 0 1 2 Whitelist EOPC-DE 0.62 0.42 NA NA 0.59 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 2 0.12 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 21 39876460 42870228 1 3 8 1 0 0 0 2 0.39 0 1 0 0 NA NA NA NA NA NA 5.87 6.22 71.13 0 1 NA Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 4 0.25 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-056 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-056 EOPC 0.26 1.92 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52530 EOPC-056 male alive C61 no treatment 47 1068 1068 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 35.13 EOPC-DE::EOPC-057 1 106653565 106904696 1 1 35 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.7 0.32 99.67 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 2 177469779 181106751 1 6 35 1 0 1 0 4 0.57 0 1 0 0 NA NA NA NA NA NA 6.7 1.32 98.59 0 2 NA Whitelist EOPC-DE 0.93 0.01 0 0 0.64 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 8 0.11 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 3 69736461 79512800 1 2 35 2 0 0 0 0 0.11 0.31 4 0 0 4 4 4 5 5 5 6.7 4.67 95.28 0 1 2 Whitelist EOPC-DE 0.54 0.56 0 0 0.48 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 4 0.06 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 5 116850009 117968155 1 1 35 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 6.7 0.62 99.24 0 1 2 Whitelist EOPC-DE 0.62 0.9 NA NA 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 6 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 7 50590997 50625909 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.7 0 99.77 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 8 NA NA 0 0 35 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.67 NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 9 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 12 40812118 40848671 1 1 35 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.7 0 99.92 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 13 26555256 43302510 5 10 35 3 1 0 1 5 0.28 0 4 0 0 4 3 4 9 5 9 6.7 30.07 55.78 0 2 0 Whitelist EOPC-DE 0.62 0 0 0 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 15 0.21 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 14 75164986 81009128 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.7 5.44 78.64 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 2 0.03 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 16 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.83 NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 19 817430 6785881 1 2 35 2 0 0 0 0 0.11 0.15 1 NA 0 NA NA NA NA NA NA 6.7 0 99.83 0 2 NA Whitelist EOPC-DE 0.54 0.35 NA 0 0.48 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 4 0.06 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 21 34784846 42868124 1 4 35 0 0 1 0 3 0.39 0 1 0 0 NA NA NA NA NA NA 6.7 0 77.35 0 2 NA Whitelist EOPC-DE 0.68 0 0 0 0.59 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 5 0.07 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-057 X NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 1 NA NA NA 0 No EOPC-DE EOPC-057 EOPC 0.34 1.93 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52532 EOPC-057 male alive C61 no treatment 50 1146 1146 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 37.7 EOPC-DE::EOPC-058 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 19 43419995 43439281 1 1 1 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 5.43 0 99.83 0 2 NA Whitelist EOPC-DE 0.62 0.08 NA NA 0.59 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 2 1 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-058 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-058 EOPC 0.26 1.95 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO52534 EOPC-058 male alive C61 no treatment 47 1833 1833 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 60.3 EOPC-DE::EOPC-06 1 231767977 233190654 2 3 62 1 1 0 0 1 0.57 0.34 3 0 0 NA NA NA 7 7 7 15.89 3.61 96.38 0 2 1 Whitelist EOPC-DE 0.62 0.59 0 0 0.64 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 2 NA NA 0 0 62 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.19 NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 3 NA NA 0 0 62 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.58 NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 4 90449580 91124734 1 1 62 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 15.89 0 99.81 0 2 NA Whitelist EOPC-DE 0.62 0.32 NA NA 0.59 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 5 59601280 59623893 1 1 62 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 7 7 7 15.89 1.11 98.75 0 2 NA Whitelist EOPC-DE 0.62 0 0 NA 0.59 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 6 NA NA 0 0 62 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.67 0 NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 7 NA NA 0 0 62 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.93 NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 8 122860945 124251119 4 5 62 1 0 1 2 1 0.57 0.25 3 0 0 NA NA NA NA NA NA 15.89 0.21 99.78 0 2 1 Whitelist EOPC-DE 0.93 0.49 0 0 0.64 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 9 0.07 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 9 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 10 45301038 100662068 1 1 62 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 15.89 40.85 58.98 0 1 2 Whitelist EOPC-DE 0.62 0.62 NA NA 0.59 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 11 3698754 86989800 13 13 62 2 5 4 2 0 0.56 0 16 0 0 16 16 16 17 17 17 15.89 2.51 97.06 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.64 1 High confidence EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA Canonical without polyploidization 26 0.21 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 12 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 13 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 14 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 15 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 16 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 17 79507536 79921948 1 1 62 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 6 6 15.89 26.23 68.52 0 1 2 Whitelist EOPC-DE 0.62 1 NA NA 0.59 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 18 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 19 4983858 52796956 5 11 62 1 1 1 2 6 0.9 0 8 0 0 8 8 8 12 12 12 15.89 25.62 74.21 0 1 2 Whitelist EOPC-DE 0.68 0 0 0 0.92 1 High confidence EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA Canonical without polyploidization 16 0.13 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 20 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 21 NA NA 0 0 62 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.39 NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-06 X 65975200 100660081 1 3 62 0 0 0 1 2 0.39 0.56 1 NA 0 NA NA NA NA NA NA 15.89 100 0 0 1 NA Whitelist EOPC-DE 0.87 0.78 NA 0 0.59 1 No EOPC-DE EOPC-06 EOPC 0.47 1.82 Prost-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 EOPC-DE DO10815 EOPC-06 male alive C61 radiation therapy partial response 38 729 729 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 23.98 EOPC-DE::EOPC-07 1 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 2 102445957 114426374 2 5 28 1 0 0 1 3 0.57 0.03 4 0 0 4 4 4 5 5 5 12.92 0.71 99.18 0 1 2 Whitelist EOPC-DE 0.68 0.1 0 0 0.64 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 7 0.12 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 3 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.9 NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 4 92017178 92630158 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.92 0.32 99.45 0 2 3 Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 5 59471020 62725272 1 1 28 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 5 3 3 12.92 2.29 97.55 0 2 3 Whitelist EOPC-DE 0.62 0.26 NA NA 0.59 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 6 41760950 42759776 1 1 28 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.92 0 99.85 0 2 NA Whitelist EOPC-DE 0.62 1 NA NA 0.59 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 2 0.04 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 7 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 12 12416874 133205507 1 8 28 2 1 0 0 5 0.3 0 10 0 0 10 10 10 12 12 12 12.92 5.23 94.2 0 1 2 Whitelist EOPC-DE 0.87 0 0 0 0.59 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 11 0.2 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 13 NA NA 0 0 28 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.21 NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 15 60598860 92765461 2 2 28 1 0 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 12.92 0.11 99.41 0 2 NA Whitelist EOPC-DE 0.68 0 0 0 0.64 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 4 0.07 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 16 NA NA 0 0 28 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.03 NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 17 NA NA 0 0 28 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.03 NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-07 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-07 EOPC 0.59 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10817 EOPC-07 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 0 NA EOPC-DE::EOPC-08 1 NA NA 0 0 8 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.32 NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 3 NA NA 0 0 8 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.69 NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 9 NA NA 0 0 8 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.52 NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 12 25543634 63115096 2 3 8 0 0 1 1 1 0.57 0 3 NA 0 NA NA NA 6 6 6 7.26 37.8 62.12 0 1 2 Whitelist EOPC-DE 0.62 0.03 NA 0 0.64 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 5 0.31 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 19 NA NA 0 0 8 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.35 NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 20 NA NA 0 0 8 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.05 NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 21 39813878 42872863 1 2 8 1 0 0 0 1 0.39 0 2 NA NA NA NA NA NA NA NA 7.26 6.36 71 0 1 2 Whitelist EOPC-DE 0.68 0.02 NA NA 0.59 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 3 0.19 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-08 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-08 EOPC 0.54 1.91 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10819 EOPC-08 male alive C61 no treatment 44 738 738 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 24.28 EOPC-DE::EOPC-09 1 NA NA 0 0 7 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.26 NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 3 24871285 26900880 1 1 7 0 0 0 1 0 0.39 0.4 3 NA NA NA NA NA 7 7 7 7.96 0.94 98.93 0 2 1 Whitelist EOPC-DE 0.62 0.64 NA NA 0.59 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 2 0.14 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 4 NA NA 0 0 7 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.63 NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 7 NA NA 0 0 7 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.57 NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 17 4880938 74493884 1 1 7 0 0 1 0 0 0.39 0.17 3 NA NA NA NA NA 5 5 5 7.96 9.97 90.03 0 1 2 Whitelist EOPC-DE 0.62 0.39 NA NA 0.59 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 2 0.14 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 19 NA NA 0 0 7 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.04 NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 21 NA NA 0 0 7 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist EOPC-DE NA 0.02 NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 EOPC-DE::EOPC-09 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist EOPC-DE NA NA NA NA NA 0 No EOPC-DE EOPC-09 EOPC 0.39 1.9 Prost-AdenoCA NA 0 0 NA 2 EOPC-DE DO10821 EOPC-09 male alive C61 no treatment 48 1101 1101 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA EOPC DE 1 36.22 ESAD-UK::OCCAMS-AH-011 1 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.9 NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 2 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.9 NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 3 60146386 60567020 2 2 27 2 0 0 0 0 0.11 0.12 4 0 0 4 3 4 5 3 3 6.27 0.21 99.67 0 1 0 Whitelist ESAD-UK 0.54 0.3 0 0 0.48 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 4 91908085 118102551 1 2 27 1 0 0 1 0 0.57 0.42 2 0 0 NA NA NA NA NA NA 6.27 0.02 99.97 0 1 2 Whitelist ESAD-UK 0.68 0.67 0 0 0.64 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 6 148190043 148434038 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.27 0.14 99.7 0 1 2 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 7 110793219 111094590 1 1 27 1 0 0 0 0 0.39 0.18 2 0 NA NA NA NA 5 5 5 6.27 0.19 99.58 0 1 2 Whitelist ESAD-UK 0.62 0.39 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 8 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 9 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 12 123125201 123153600 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.27 0.02 99.9 0 2 3 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 16 78698883 78815008 1 1 27 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 6.27 0.13 99.76 0 1 2 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 17 NA NA 0 0 27 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 18 18899776 21651390 2 2 27 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 10 3 4 6.27 4.02 91.33 0 2 6 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 20 9652454 9728558 1 1 27 0 0 0 1 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 6.27 0 99.01 0 2 NA Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 21 30313813 36239648 1 2 27 0 0 1 1 0 0.57 0.04 3 NA 0 NA NA NA NA NA NA 6.27 77.35 0 0 1 3 Whitelist ESAD-UK 0.68 0.15 NA 0 0.64 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-011 X 57967831 96838991 1 2 27 1 0 1 0 0 0.57 0.4 1 NA 0 NA NA NA NA NA NA 6.27 100 0 0 1 NA Whitelist ESAD-UK 0.68 0.64 NA 0 0.64 0 No ESAD-UK OCCAMS-AH-011 ESAD 0.52 1.92 Eso-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50325 OCCAMS-AH-011 male alive C15.5 no treatment 65 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-AH-014 1 26878767 27887703 2 2 299 2 0 0 0 0 0.11 0.83 2 0 0 NA NA NA 22 5 8 47.75 57.69 39.33 0 1 2 Whitelist ESAD-UK 0.54 0.97 0 0 0.48 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 2 5173470 220924964 1 25 299 13 5 1 2 4 0 0.3 42 0 0 42 7 10 45 7 11 47.75 80.8 16.51 3 3 2 Whitelist ESAD-UK 15_7 0.41 0.54 0 0 0.04 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 46 0.08 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 3 60335476 60674217 2 2 299 2 0 0 0 0 0.11 1 4 0 0 4 3 4 33 13 13 47.75 1.13 98.74 0 1 0 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 4 137916963 137937457 2 2 299 0 0 1 1 0 0.57 0.64 2 0 0 NA NA NA 29 13 13 47.75 2.09 97.7 0 1 2 Whitelist ESAD-UK 0.68 0.85 0 0 0.64 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 5 18292780 166480950 1 15 299 9 1 0 0 5 0 0.72 20 0 0 20 6 8 21 6 8 47.75 30.28 67.04 1 2 3 Whitelist ESAD-UK 7 0.13 0.9 0 0 0.01 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 25 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 6 90175111 91113551 5 5 299 2 1 1 1 0 0.9 0 4 0 0 4 4 4 23 8 8 47.75 42.42 57.35 2 2 3 Whitelist ESAD-UK 0.93 0.01 0 0 0.92 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 7 812976 133023540 1 11 299 3 2 0 0 6 0.14 0.3 13 0 0 13 5 6 14 5 6 47.75 97.23 0.02 1 3 2 Whitelist ESAD-UK 2 0.98 0.55 0 0 0.59 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 8 84505038 84588051 2 2 299 1 1 0 0 0 0.57 0.9 4 0 0 4 3 4 15 9 9 47.75 99.13 0.86 0 3 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 9 15450269 78965593 14 21 299 5 2 3 4 7 0.7 0 29 0 0 29 8 9 38 8 11 47.75 74.78 22.01 0 1 4 Whitelist ESAD-UK 0.84 0 0 0 0.78 1 High confidence ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA With other complex events 35 0.06 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 10 84597156 108564886 8 10 299 4 0 2 2 2 0.26 0.89 7 0 0 7 4 5 13 4 8 47.75 82.03 17.9 0 3 1 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 11 66542045 68346286 2 6 299 0 0 1 1 4 0.57 0.27 5 0 0 5 3 5 19 4 7 47.75 96.39 0.15 3 4 1 Whitelist ESAD-UK 0.62 0.51 0 0 0.64 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 12 34672507 81594753 1 3 299 2 1 0 0 0 0.3 0 3 0 0 NA NA NA 5 5 5 47.75 0.01 99.91 0 2 1 Whitelist ESAD-UK 0.62 0.02 0 0 0.59 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 13 56003447 99205592 1 5 299 4 1 0 0 0 0.04 0.75 7 0 0 7 4 4 8 5 5 47.75 85.85 0 0 4 3 Whitelist ESAD-UK 0.45 0.92 0 0 0.36 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 14 26745502 82278531 1 3 299 2 1 0 0 0 0.3 0.87 10 0 0 10 6 10 13 8 8 47.75 4.16 80.67 1 2 1 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 15 26509537 76569171 1 7 299 2 1 0 0 4 0.3 0.11 9 0 0 9 5 7 11 5 7 47.75 84.59 0 0 5 4 Whitelist ESAD-UK 2 0.96 0.28 0 0 0.59 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 16 5893632 89487422 1 4 299 3 1 0 0 0 0.11 0.21 6 0 0 6 3 4 7 4 4 47.75 51.63 47.32 0 2 3 Whitelist ESAD-UK 0.54 0.43 0 0 0.48 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 17 NA NA 0 0 299 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.03 NA NA NA 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 18 NA NA 0 0 299 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.81 0 NA NA 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 19 19891654 45335658 1 2 299 0 2 0 0 0 0.11 0.09 5 0 0 5 3 5 8 4 5 47.75 83.7 8.87 0 3 2 Whitelist ESAD-UK 0.54 0.25 0 0 0.48 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 20 14949526 15210623 2 2 299 1 1 0 0 0 0.57 1 6 0 0 6 3 3 11 5 5 47.75 98.97 0.06 0 5 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 21 NA NA 0 0 299 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 22 NA NA 0 0 299 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.1 0 NA NA 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-014 X 1379336 147366167 1 14 299 10 2 0 0 2 0 0.6 3 0 0 NA NA NA NA NA NA 47.75 0.09 99.91 4 2 3 Whitelist ESAD-UK 0.01 0.81 0 0 0.01 1 No ESAD-UK OCCAMS-AH-014 ESAD 0.49 2.86 Eso-AdenoCA NA 26 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:3 2 ESAD-UK DO50326 OCCAMS-AH-014 male deceased C15.5 no treatment 62 1238 1238 Current smoker (includes daily smokers non-daily/occasional smokers) 48 no None Included Eso-AdenoCA ESAD UK 1 40.72 ESAD-UK::OCCAMS-AH-021 1 50867071 51254096 6 6 262 1 3 1 1 0 0.57 0.73 6 0 0 6 3 5 28 6 9 52.49 26.06 70.92 0 2 3 Whitelist ESAD-UK 0.68 0.91 0 0 0.64 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 2 192261510 193160773 2 2 262 0 0 1 1 0 0.57 0.22 4 0 0 4 3 4 25 6 11 52.49 33.87 63.44 0 2 3 Whitelist ESAD-UK 0.68 0.45 0 0 0.64 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 3 30571926 30677691 3 3 262 0 0 2 1 0 0.3 0 1 0 0 NA NA NA 24 4 12 52.49 85.91 11.02 0 1 NA Whitelist ESAD-UK 0.62 0.03 0 0 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 4 60891406 159691897 1 8 262 5 3 0 0 0 0.03 0.21 11 0 0 11 4 5 12 5 6 52.49 49.95 47.69 0 1 2 Whitelist ESAD-UK 0.41 0.44 0 0 0.33 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 5 862611 170457213 1 7 262 4 3 0 0 0 0.06 0.01 10 0 0 10 3 8 11 3 9 52.49 72.28 25.04 2 1 4 Whitelist ESAD-UK 0.54 0.06 0 0 0.48 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 6 41442762 41816425 4 4 262 1 1 2 0 0 0.57 0.01 3 0 0 NA NA NA 22 4 5 52.49 74.75 22.42 0 4 6 Whitelist ESAD-UK 0.68 0.03 0 0 0.64 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 7 14203729 158247060 1 12 262 6 3 0 0 3 0.01 0.78 17 0 0 17 4 8 18 5 8 52.49 60.62 36.83 0 1 2 Whitelist ESAD-UK 0.54 0.94 0 0 0.21 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 21 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 8 82398373 140737921 1 6 262 1 5 0 0 0 0.01 0.09 8 0 0 8 5 8 9 5 5 52.49 99.85 0.04 0 3 4 Whitelist ESAD-UK 0.25 0.25 0 0 0.19 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 9 21655975 111832397 1 2 262 1 1 0 0 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 52.49 0 99.83 0 2 NA Whitelist ESAD-UK 0.68 0.17 0 0 0.64 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 10 NA NA 0 0 262 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.02 NA NA NA 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 11 27392336 119315828 1 7 262 1 4 0 1 1 0.11 0.88 9 0 0 9 3 9 12 3 12 52.49 48.8 47.74 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 12 11520488 95894055 1 7 262 3 1 0 1 2 0.28 1 17 0 0 17 4 6 21 5 5 52.49 48.37 47.95 0 3 6 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 13 64480533 101449824 1 2 262 0 2 0 0 0 0.11 0.01 3 NA 0 NA NA NA 4 3 3 52.49 1.19 81.87 0 2 4 Whitelist ESAD-UK 0.54 0.05 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 14 37226149 76777390 1 5 262 3 2 0 0 0 0.14 0.59 10 0 0 10 6 10 11 7 7 52.49 83.3 0.79 0 1 0 Whitelist ESAD-UK 0.62 0.81 0 0 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 15 62340200 64103696 1 1 262 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 52.49 72.97 11.62 0 1 2 Whitelist ESAD-UK 0.62 0.32 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 16 1142079 79080829 1 11 262 6 4 1 0 0 0.04 0 15 0 0 15 4 12 19 4 5 52.49 36.58 58.31 0 2 1 Whitelist ESAD-UK 0.49 0.01 0 0 0.41 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 17 5944727 79494937 1 7 262 2 2 0 0 3 0.26 0.7 6 0 0 6 4 6 7 4 4 52.49 49.33 46.24 0 2 3 Whitelist ESAD-UK 0.62 0.9 0 0 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 18 19424645 69692016 1 8 262 2 4 1 0 1 0.17 0.7 4 0 0 4 3 4 5 3 3 52.49 2.32 93.04 0 3 2 Whitelist ESAD-UK 0.62 0.89 0 0 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 19 4125375 58935360 31 33 262 6 10 10 5 2 0.44 0 45 0 0 45 4 7 47 4 7 52.49 70.93 21.47 7 1 3 Whitelist ESAD-UK 0.78 0 0 0 0.64 0 Low confidence ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA With other complex events 64 0.12 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 20 14662277 15231383 3 3 262 3 0 0 0 0 0.03 0.02 6 0 0 6 0 5 13 5 5 52.49 98.6 0.47 6 2 0 Whitelist ESAD-UK 0.41 0.07 0 0 0.33 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 21 NA NA 0 0 262 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 22 36642541 41360879 1 2 262 1 0 0 0 1 0.39 0.25 1 0 NA NA NA NA 5 0 5 52.49 61.36 14.86 0 1 NA Whitelist ESAD-UK 0.68 0.49 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-021 X 9548895 96648653 1 8 262 5 2 0 0 1 0.02 0.89 1 0 0 NA NA NA NA NA NA 52.49 100 0 0 1 NA Whitelist ESAD-UK 0.21 1 0 0 0.33 0 No ESAD-UK OCCAMS-AH-021 ESAD 0.26 2.05 Eso-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:1 3 ESAD-UK DO50327 OCCAMS-AH-021 male deceased C15.5 no treatment 76 148 148 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 4.87 ESAD-UK::OCCAMS-AH-036 1 33449752 245956178 1 7 149 3 2 0 0 2 0.14 0.76 9 0 0 9 3 7 9 3 5 93.15 97.02 0 0 5 4 Whitelist ESAD-UK 0.62 0.93 0 0 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 2 73339881 154511447 1 3 149 1 2 0 0 0 0.3 0.05 6 0 0 6 4 6 9 5 5 93.15 99.89 0 0 5 6 Whitelist ESAD-UK 0.62 0.17 0 0 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 3 60397274 95523103 2 10 149 2 0 1 1 6 0.57 0 16 0 0 16 8 9 17 8 8 93.15 99.95 0.01 0 5 6 Whitelist ESAD-UK 8 0.62 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 4 117915270 129117135 1 2 149 0 2 0 0 0 0.11 0.14 3 0 0 NA NA NA 5 3 3 93.15 99.99 0 0 4 5 Whitelist ESAD-UK 0.54 0.33 0 0 0.48 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 5 NA NA 0 0 149 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.39 NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 6 NA NA 0 0 149 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.13 NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 7 48537680 117205934 1 3 149 2 1 0 0 0 0.3 0.46 5 0 0 5 3 3 8 3 3 93.15 99.78 0 3 6 5 Whitelist ESAD-UK 0.62 0.71 0 0 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 8 53953466 136238129 2 6 149 1 0 0 1 4 0.57 0.06 5 0 0 5 5 5 12 8 12 93.15 96.58 0 3 5 4 Whitelist ESAD-UK 0.62 0.18 0 0 0.64 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 9 10427499 130698466 3 8 149 1 1 1 0 5 0.8 0.39 9 0 0 9 3 7 12 3 7 93.15 81.45 16 3 4 5 Whitelist ESAD-UK 0.68 0.64 0 0 0.84 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 10 102687375 102817430 1 1 149 0 1 0 0 0 0.39 0.33 2 0 NA NA NA NA 6 5 6 93.15 96.65 0 0 4 5 Whitelist ESAD-UK 0.62 0.58 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 11 NA NA 0 0 149 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.17 NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 12 NA NA 0 0 149 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.38 NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 13 NA NA 0 0 149 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.74 NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 14 26521906 50006044 1 3 149 1 1 0 0 1 0.57 0.48 5 0 0 5 4 5 8 4 6 93.15 99.09 0 0 4 5 Whitelist ESAD-UK 0.62 0.72 0 0 0.64 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 15 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 16 78561704 78922609 2 2 149 2 0 0 0 0 0.11 0.6 4 0 0 4 0 3 11 4 4 93.15 99.62 0.28 0 4 0 Whitelist ESAD-UK 0.54 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 17 38600780 56393627 40 46 149 9 11 9 11 6 0.94 0 33 0 0 33 4 5 36 4 5 93.15 95.55 0 1 4 5 Whitelist ESAD-UK 0.92 0 0 0 0.96 0 Low confidence ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA With other complex events 86 0.29 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 18 20034936 75266034 1 2 149 1 0 0 0 1 0.39 0.45 3 NA NA NA NA NA 6 6 6 93.15 94.66 0 3 4 5 Whitelist ESAD-UK 0.68 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 19 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 20 14028274 31023105 1 7 149 0 2 0 0 5 0.11 0 4 0 0 4 0 3 7 0 0 93.15 92.36 0 0 7 9 Whitelist ESAD-UK 3 0.77 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 21 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 22 38172913 38192796 1 1 149 0 1 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 93.15 100 0 0 5 NA Whitelist ESAD-UK 0.62 0.89 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-036 X 31713694 31733405 1 1 149 0 1 0 0 0 0.39 0.85 1 0 NA NA NA NA 6 5 6 93.15 77.4 19.32 0 1 NA Whitelist ESAD-UK 0.62 0.99 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-036 ESAD 0.65 4.49 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578205_A_C,CN:4 4 ESAD-UK DO50328 OCCAMS-AH-036 male alive C15.5 no treatment 74 1100 1100 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 36.18 ESAD-UK::OCCAMS-AH-039 1 35222685 41282247 2 2 146 1 0 1 0 0 0.57 1 4 0 0 4 0 4 6 3 6 29.37 0.01 99.99 0 2 1 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 2 47547253 227912729 1 7 146 6 1 0 0 0 0 0.23 14 0 0 14 10 14 15 11 11 29.37 19.19 80.72 0 2 3 Whitelist ESAD-UK 0.13 0.47 0 0 0.09 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 14 0.05 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 3 60184941 60611121 5 5 146 5 0 0 0 0 0 0.87 8 0 0 8 7 8 15 7 7 29.37 0.48 99.39 0 1 0 Whitelist ESAD-UK 0.1 1 0 0 0.07 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 10 0.03 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 4 70179301 189257427 1 5 146 2 1 0 2 0 0.53 0.25 7 0 0 7 5 7 8 5 5 29.37 10.23 89.75 0 2 1 Whitelist ESAD-UK 0.68 0.49 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 10 0.03 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 5 5866074 138711741 1 3 146 3 0 0 0 0 0.03 0.04 1 0 0 NA NA NA NA NA NA 29.37 0 99.88 1 2 NA Whitelist ESAD-UK 0.41 0.13 0 0 0.33 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 6 0.02 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 6 NA NA 0 0 146 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.01 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 7 4922744 142994674 1 4 146 2 1 1 0 0 0.57 0.71 8 0 0 8 5 7 11 5 9 29.37 99.72 0.06 0 3 2 Whitelist ESAD-UK 0.68 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 8 0.03 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 8 100136832 138025298 1 2 146 2 0 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 29.37 0 99.78 0 2 NA Whitelist ESAD-UK 0.54 0.13 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 9 NA NA 0 0 146 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.16 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 10 77599034 77952864 1 1 146 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 29.37 0.26 99.56 0 1 2 Whitelist ESAD-UK 0.62 0.38 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 11 68863900 132284467 32 32 146 13 7 6 6 0 0.24 0 54 0 0 54 4 6 57 4 6 29.37 17.63 82.06 5 3 5 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA With other complex events 64 0.22 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 12 2683079 6560932 2 2 146 0 1 0 1 0 0.57 0.23 8 0 0 8 3 6 13 3 8 29.37 19.7 76.56 0 3 2 Whitelist ESAD-UK 0.68 0.47 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 13 68694662 68799228 4 4 146 0 1 2 1 0 0.57 0 3 0 0 NA NA NA 22 5 7 29.37 70.34 15.47 0 1 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 8 0.03 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 14 99484682 107223725 1 2 146 2 0 0 0 0 0.11 0.34 2 NA 0 NA NA NA NA NA NA 29.37 13.76 67.14 0 1 2 Whitelist ESAD-UK 0.54 0.59 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 15 83746248 83796912 1 2 146 1 0 0 1 0 0.57 0.8 2 0 0 NA NA NA 4 0 3 29.37 69.89 14.61 0 1 3 Whitelist ESAD-UK 0.68 0.95 0 0 0.64 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 16 78571464 79065450 1 2 146 2 0 0 0 0 0.11 0.45 3 NA 0 NA NA NA 5 3 3 29.37 44.79 50.64 0 0 1 Whitelist ESAD-UK 0.54 0.69 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 17 NA NA 0 0 146 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.95 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 18 NA NA 0 0 146 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.95 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 19 NA NA 0 0 146 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 20 NA NA 0 0 146 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 21 36205206 36277574 1 1 146 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 6 29.37 30.26 40.03 0 0 2 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 22 45529923 45830966 3 3 146 1 0 1 1 0 0.8 0.01 4 0 0 4 3 4 10 4 9 29.37 34.12 42.1 0 1 2 Whitelist ESAD-UK 0.87 0.04 0 0 0.84 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 6 0.02 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-039 X 6983903 96970685 1 3 146 2 1 0 0 0 0.3 0.13 1 0.02 0 NA NA NA NA NA NA 29.37 100 0 0 1 NA Whitelist ESAD-UK 0.62 0.32 0.02 0 0.59 0 No ESAD-UK OCCAMS-AH-039 ESAD 0.38 1.99 Eso-AdenoCA NA 6 0.02 stopgain,17_7577022_A_G,CN:1 2 ESAD-UK DO50318 OCCAMS-AH-039 male alive C15.5 no treatment 67 1264 1264 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 41.58 ESAD-UK::OCCAMS-AH-042 1 118645089 227479863 1 4 85 2 1 0 0 1 0.3 0.84 10 0 0 10 4 5 12 4 5 77.45 97.03 0 0 3 1 Whitelist ESAD-UK 0.62 0.98 0 0 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 2 36139543 206988909 2 4 85 0 0 2 2 0 0.26 0.43 9 0 0 9 5 7 13 7 7 77.45 99.49 0.4 2 3 4 Whitelist ESAD-UK 0.62 0.68 0 0 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 3 60578645 185709339 1 3 85 3 0 0 0 0 0.03 0.53 4 0 0 4 3 4 5 3 5 77.45 99.94 0.01 0 3 1 Whitelist ESAD-UK 0.41 0.76 0 0 0.33 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 4 92220438 92277894 1 1 85 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 7 3 7 77.45 99.79 0 0 0 3 Whitelist ESAD-UK 0.62 0.32 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 5 58277245 58860801 1 1 85 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 5 0 3 77.45 93.13 4.19 0 1 3 Whitelist ESAD-UK 0.62 0.2 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 6 NA NA 0 0 85 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.2 NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 7 54049409 158506805 1 5 85 2 3 0 0 0 0.14 0.47 8 0 0 8 4 5 9 4 5 77.45 70.88 28.9 0 3 6 Whitelist ESAD-UK 0.62 0.71 0 0 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 8 437530 115674119 4 5 85 2 0 1 1 1 0.57 0 13 0 0 13 3 5 24 4 8 77.45 96.58 0 0 7 6 Whitelist ESAD-UK 0.68 0.02 0 0 0.64 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 9 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 9 NA NA 0 0 85 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 10 122717795 123241116 2 2 85 0 0 1 1 0 0.57 0.11 1 0 0 NA NA NA 7 3 3 77.45 99.84 0 0 6 NA Whitelist ESAD-UK 0.68 0.29 0 0 0.64 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 11 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 12 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 13 44820400 101586504 1 3 85 0 3 0 0 0 0.03 0.03 6 0 0 6 5 6 8 5 5 77.45 85.84 0.01 0 4 2 Whitelist ESAD-UK 0.41 0.1 0 0 0.33 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 14 92822996 97208720 1 1 85 0 0 1 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 77.45 9.73 71.57 0 2 3 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 15 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 16 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 17 75082244 75240172 1 1 85 0 0 0 1 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 77.45 99.98 0 0 4 NA Whitelist ESAD-UK 0.62 0.91 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 18 827310 25488324 12 12 85 3 4 2 3 0 0.88 0 27 0 0 27 6 18 35 6 6 77.45 28.28 66.7 0 5 6 Whitelist ESAD-UK 0.93 0 0 0 0.91 0 Low confidence ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA With other complex events 24 0.14 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 19 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 20 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 21 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 22 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-042 X 96339364 96831044 1 1 85 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 77.45 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-042 ESAD 0.48 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 3 ESAD-UK DO50329 OCCAMS-AH-042 male alive C15.5 no treatment 56 572 572 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-AH-046 1 7913387 245270864 1 4 145 3 1 0 0 0 0.11 0.02 8 0.03 0 8 3 4 9 3 4 65.83 42.77 54.26 0 2 4 Whitelist ESAD-UK 0.54 0.08 0.03 0 0.48 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 8 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 2 173658107 230025114 2 4 145 1 0 2 1 0 0.57 0.65 6 0 0 6 3 4 11 5 7 65.83 98.96 0.96 0 3 2 Whitelist ESAD-UK 0.68 0.86 0 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 8 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 3 60437910 60619030 2 2 145 2 0 0 0 0 0.11 0.41 4 0 0 4 0 3 11 6 6 65.83 99.77 0.2 0 0 1 Whitelist ESAD-UK 0.54 0.66 0 0 0.48 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 4 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 4 138929958 139232664 2 2 145 0 0 1 1 0 0.57 0.18 2 0 0 NA NA NA 24 9 9 65.83 40.2 59.78 0 2 3 Whitelist ESAD-UK 0.68 0.4 0 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 4 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 5 58420831 58975162 3 3 145 1 2 0 0 0 0.3 1 6 0 0 6 0 4 12 3 4 65.83 54.17 45.71 0 0 1 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 6 0.02 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 6 118237892 166197076 2 2 145 1 0 0 1 0 0.57 0.38 6 0 0 6 3 4 18 4 7 65.83 74.46 22.67 3 3 1 Whitelist ESAD-UK 0.68 0.63 0 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 4 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 7 110406326 154086234 1 4 145 1 1 1 0 1 0.8 0.2 5 0 0 5 3 5 6 3 3 65.83 81.96 17.82 0 2 5 Whitelist ESAD-UK 0.68 0.42 0 0 0.84 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 7 0.02 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 8 9931688 139910902 1 10 145 3 5 1 0 1 0.09 0.18 14 0 0 14 6 11 15 6 6 65.83 99.99 0 0 5 4 Whitelist ESAD-UK 0.47 0.4 0 0 0.48 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 19 0.07 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 9 28805067 119674644 1 4 145 0 4 0 0 0 0.01 0.67 2 0 0 NA NA NA NA NA NA 65.83 97.39 0 0 3 NA Whitelist ESAD-UK 0.21 0.87 0 0 0.16 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 8 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 10 34649412 35126715 2 2 145 0 0 1 1 0 0.57 1 4 0 0 4 4 4 14 4 6 65.83 96.07 0.5 0 2 3 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 4 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 11 37430067 38153111 1 2 145 1 1 0 0 0 0.57 0.17 3 0 0 NA NA NA 5 3 5 65.83 99.44 0 0 3 1 Whitelist ESAD-UK 0.68 0.38 0 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 4 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 12 6964015 6982917 1 1 145 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 65.83 62.33 37.59 0 2 NA Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 13 19867913 110286000 5 5 145 3 1 0 1 0 0.28 0.04 10 0 0 10 8 10 11 8 8 65.83 85.85 0 0 4 5 Whitelist ESAD-UK 0.62 0.13 0 0 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 10 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 14 37303595 101173412 1 3 145 1 1 0 0 1 0.57 0.63 4 NA 0 4 3 4 5 3 3 65.83 0.35 83.74 0 2 1 Whitelist ESAD-UK 0.62 0.85 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 5 0.02 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 15 83859863 84083623 1 1 145 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 65.83 84.59 0 0 3 4 Whitelist ESAD-UK 0.62 0.42 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 16 78579025 78989210 4 4 145 3 1 0 0 0 0.11 0.12 4 0 0 4 3 4 9 3 5 65.83 99.47 0.44 0 3 2 Whitelist ESAD-UK 0.54 0.3 0 0 0.48 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 8 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 17 3658212 53172475 9 10 145 1 3 3 2 1 0.75 0 16 0 0 16 8 13 18 8 13 65.83 38.73 56.83 0 2 5 Whitelist ESAD-UK 0.68 0 0 0 0.83 1 High confidence ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA With other complex events 19 0.07 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 18 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 0 0 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 19 NA NA 0 0 145 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.77 NA NA NA 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 0 0 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 20 14636658 15787509 7 8 145 6 1 0 0 1 0 0 16 0 0 16 4 6 22 4 5 65.83 87.38 5.49 0 5 3 Whitelist ESAD-UK 0.21 0 0 0 0.09 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 15 0.05 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 21 30872878 35920991 1 1 145 0 0 1 0 0 0.39 0.7 1 NA NA NA NA NA 4 0 4 65.83 31.65 45.7 0 2 NA Whitelist ESAD-UK 0.62 0.89 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 22 47087136 47173800 1 1 145 0 1 0 0 0 0.39 0.25 1 0 NA NA NA NA NA NA NA 65.83 0 76.22 0 2 NA Whitelist ESAD-UK 0.62 0.49 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-046 X 7850743 121032660 1 5 145 4 1 0 0 0 0.04 0.85 3 0 0 NA NA NA NA NA NA 65.83 0.1 99.9 0 2 3 Whitelist ESAD-UK 0.45 0.98 0 0 0.36 1 No ESAD-UK OCCAMS-AH-046 ESAD 0.37 3.02 Eso-AdenoCA NA 10 0.03 stopgain,17_7578257_A_C,CN:3 3 ESAD-UK DO50330 OCCAMS-AH-046 male deceased C15.5 no treatment 67 343 343 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 11.28 ESAD-UK::OCCAMS-AH-047 1 46817160 246921642 2 6 211 1 1 1 1 2 1 0.61 18 0 0 18 3 4 24 3 4 87.91 96.58 0.08 0 8 4 Whitelist ESAD-UK 0.93 0.82 0 0 1 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 2 51949888 200774373 2 8 211 1 0 1 0 6 0.57 1 13 0 0 13 5 6 19 5 5 87.91 97.32 0 0 5 4 Whitelist ESAD-UK 0.87 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 3 16310308 195050850 2 5 211 2 0 1 1 1 0.57 0.69 14 0 0 14 4 7 16 4 7 87.91 76.71 20.16 0 3 5 Whitelist ESAD-UK 0.93 0.89 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 4 91181460 91220864 1 1 211 1 0 0 0 0 0.39 0.49 1 0 NA NA NA NA 11 3 4 87.91 71.42 28.47 0 4 NA Whitelist ESAD-UK 0.62 0.73 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 5 24429295 33252673 2 6 211 0 0 1 1 4 0.57 0.48 5 0 0 5 4 5 22 4 5 87.91 99.88 0 0 6 8 Whitelist ESAD-UK 2 0.93 0.72 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 6 28691586 46535852 2 2 211 0 2 0 0 0 0.11 0.88 10 0 0 10 4 6 25 5 6 87.91 99.8 0.05 0 5 7 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 7 22681427 112981138 1 3 211 0 0 2 0 1 0.11 0.06 11 0 0 11 3 4 13 3 4 87.91 97.28 0 0 6 5 Whitelist ESAD-UK 0.62 0.2 0 0 0.48 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 8 23473719 128219976 14 18 211 3 4 3 4 4 0.96 0 31 0 0 31 3 5 55 4 4 87.91 78.34 17.71 0 5 11 Whitelist ESAD-UK 0.87 0 0 0 0.98 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 32 0.08 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 9 4611954 23037523 1 3 211 2 0 0 0 1 0.11 0.07 5 NA 0 5 3 5 9 4 4 87.91 95.55 1.94 0 3 2 Whitelist ESAD-UK 0.62 0.21 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 10 32439917 57498054 3 4 211 0 1 1 1 1 0.8 0.62 15 0 0 15 5 8 26 11 11 87.91 61.8 38.02 0 3 2 Whitelist ESAD-UK 1 0.83 0 0 0.84 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 11 70088376 70661244 1 2 211 0 0 0 2 0 0.11 0.19 4 0 0 4 0 3 19 4 4 87.91 99.54 0.04 0 36 49 Whitelist ESAD-UK 0.54 0.41 0 0 0.48 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 12 51784442 72403896 1 2 211 1 1 0 0 0 0.57 0.02 4 0 0 4 3 4 6 3 3 87.91 99.92 0 0 5 4 Whitelist ESAD-UK 0.68 0.08 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 13 50708417 57598775 1 1 211 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 87.91 100 0 0 3 NA Whitelist ESAD-UK 0.62 0.17 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 14 NA NA 0 0 211 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.21 NA NA NA 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 15 77906511 80547423 1 1 211 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 87.91 100 0 0 3 4 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 16 17922114 70800660 5 6 211 0 0 1 4 1 0.04 0 13 0 0 13 5 12 19 5 5 87.91 99.9 0 0 4 5 Whitelist ESAD-UK 0.54 0 0 0 0.36 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 17 28626960 29554752 2 2 211 0 1 1 0 0 0.57 0.67 2 0 0 NA NA NA 8 3 5 87.91 95.57 0 0 4 6 Whitelist ESAD-UK 0.68 0.87 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 18 6069326 66257806 3 5 211 0 0 2 1 2 0.3 0 18 0 0 18 3 5 30 3 5 87.91 94.69 0 0 5 6 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 19 34814974 34958520 1 1 211 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 9 3 4 87.91 99.58 0.24 0 2 4 Whitelist ESAD-UK 0.62 0.57 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 20 15614382 58436650 4 7 211 2 0 1 1 3 0.57 0 21 0 0 21 5 5 27 5 6 87.91 93.51 0.09 0 13 3 Whitelist ESAD-UK 0.62 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 21 NA NA 0 0 211 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 22 46434583 50985112 10 11 211 1 5 2 2 1 0.31 0 13 0 0 13 6 13 14 7 7 87.91 99.38 0 0 4 5 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA With other complex events 21 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-047 X 96675562 96803522 1 1 211 1 0 0 0 0 0.39 0.2 1 0 NA NA NA NA NA NA NA 87.91 76.39 20.46 0 3 NA Whitelist ESAD-UK 0.62 0.43 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-047 ESAD 0.31 4.28 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 5 ESAD-UK DO50331 OCCAMS-AH-047 male deceased C15.5 no treatment 75 890 890 Current reformed smoker, duration not specified 62 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.28 ESAD-UK::OCCAMS-AH-048 1 9886001 245842090 1 12 142 3 3 0 1 5 0.28 0.53 17 0 0 17 7 12 18 7 12 68.14 82.86 14.18 0 3 2 Whitelist ESAD-UK 10 0.93 0.76 0 0 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 19 0.07 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 2 48042682 206437990 1 3 142 3 0 0 0 0 0.03 0.01 6 0 0 6 6 6 10 10 10 68.14 91.66 8.21 3 2 4 Whitelist ESAD-UK 0.41 0.06 0 0 0.33 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 3 60093462 185190112 1 8 142 7 0 0 1 0 0 1 19 0 0 19 5 8 20 5 7 68.14 99.86 0.09 2 3 5 Whitelist ESAD-UK 0.06 1 0 0 0.04 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 4 12808722 178423153 1 6 142 5 1 0 0 0 0.01 0.31 12 0 0 12 7 7 13 7 7 68.14 1.87 97.92 0 2 0 Whitelist ESAD-UK 0.25 0.56 0 0 0.19 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 5 121562324 160862274 5 5 142 3 0 1 1 0 0.28 0.61 1 0 0 NA NA NA NA NA NA 68.14 34.72 65.14 0 3 NA Whitelist ESAD-UK 0.62 0.82 0 0 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 6 1806945 148665856 1 5 142 3 0 0 0 2 0.03 0.72 8 0 0 8 5 8 9 5 5 68.14 99.61 0.29 1 4 2 Whitelist ESAD-UK 0.62 0.9 0 0 0.33 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 7 2901227 145317445 41 41 142 10 12 10 9 0 0.93 0 89 0 0 89 12 12 90 13 13 68.14 99.77 0.01 5 5 3 Whitelist ESAD-UK 0.96 0 0 0 0.95 1 High confidence ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA With other complex events 82 0.29 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 8 25250780 138214094 1 2 142 1 1 0 0 0 0.57 0.05 4 NA 0 4 3 4 9 3 3 68.14 93.18 6.82 0 4 2 Whitelist ESAD-UK 0.68 0.17 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 9 1127673 26889697 5 5 142 0 0 2 3 0 0.14 0.27 8 0 0 8 4 5 11 4 5 68.14 94.39 4.95 1 2 4 Whitelist ESAD-UK 0.62 0.52 0 0 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 10 14667748 82094765 2 4 142 0 1 0 1 2 0.57 0.84 4 0 0 4 4 4 8 5 5 68.14 99.82 0 0 3 4 Whitelist ESAD-UK 1 0.68 0.98 0 0 0.64 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 11 1093359 1235071 1 1 142 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 68.14 99.57 0 0 3 6 Whitelist ESAD-UK 0.62 0.07 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 12 29378460 129944861 1 3 142 1 1 0 0 1 0.57 0.23 2 NA 0 NA NA NA NA NA NA 68.14 99.92 0 1 1 3 Whitelist ESAD-UK 0.87 0.46 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 13 114496746 114578956 1 1 142 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 68.14 99.42 0.07 0 2 NA Whitelist ESAD-UK 0.62 1 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 14 38346789 107234569 1 3 142 0 0 0 1 2 0.39 1 4 NA 0 4 4 4 5 4 5 68.14 64.17 35.72 0 1 3 Whitelist ESAD-UK 0.62 1 NA 0 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 15 54520126 54534134 1 1 142 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 68.14 0.01 99.99 0 2 3 Whitelist ESAD-UK 0.62 0.42 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 16 72676198 79218681 1 4 142 4 0 0 0 0 0.01 0.44 10 0 0 10 5 10 11 5 11 68.14 0.55 99.35 0 2 0 Whitelist ESAD-UK 0.21 0.68 0 0 0.16 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 17 78270609 78286083 1 1 142 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 68.14 95.56 0 0 4 NA Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 18 48594159 48634410 2 2 142 0 0 1 1 0 0.57 1 4 0 0 4 4 4 8 4 5 68.14 8.77 86.58 0 0 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 19 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 20 14723326 15485434 2 2 142 2 0 0 0 0 0.11 0.24 7 0 0 7 3 5 9 3 5 68.14 98.98 0.06 0 0 6 Whitelist ESAD-UK 0.54 0.48 0 0 0.48 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 21 36176508 36303474 1 1 142 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA NA NA NA 68.14 0.26 77.09 0 0 2 Whitelist ESAD-UK 0.62 0.89 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 22 47300540 47313493 1 1 142 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 68.14 100 0 0 4 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-048 X 6942770 127849331 1 3 142 2 1 0 0 0 0.3 0.12 6 0 0 6 3 6 7 3 3 68.14 0.33 99.67 0 2 0 Whitelist ESAD-UK 0.62 0.31 0 0 0.59 1 No ESAD-UK OCCAMS-AH-048 ESAD 0.38 3.19 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:3 3 ESAD-UK DO50332 OCCAMS-AH-048 male deceased C15.5 no treatment 78 865 865 Current reformed smoker, duration not specified 25 no None Included Eso-AdenoCA ESAD UK 1 28.45 ESAD-UK::OCCAMS-AH-063 1 NA NA 0 0 101 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.09 NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 2 NA NA 0 0 101 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.02 NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 3 22120079 188612126 1 11 101 9 2 0 0 0 0 0.01 17 0 0 17 5 9 18 5 5 79.9 99.66 0.2 0 4 2 Whitelist ESAD-UK 0.02 0.03 0 0 0.02 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 22 0.11 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 4 90589234 154150476 2 2 101 0 0 1 1 0 0.57 0.42 3 0 0 NA NA NA 6 3 4 79.9 72.26 24.79 0 3 1 Whitelist ESAD-UK 0.68 0.67 0 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 5 100534773 116356031 1 3 101 1 0 1 1 0 0.8 0.53 6 0 0 6 3 6 7 3 3 79.9 99.82 0.06 0 3 4 Whitelist ESAD-UK 0.87 0.76 0 0 0.84 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 6 0.03 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 6 13754043 162673231 1 4 101 1 2 0 1 0 0.57 0.53 9 0 0 9 3 5 10 4 5 79.9 99.73 0.03 0 3 1 Whitelist ESAD-UK 0.68 0.76 0 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 8 0.04 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 7 63332022 64774005 1 1 101 0 0 1 0 0 0.39 0.82 8 0 0 8 0 4 10 0 0 79.9 40.72 59.05 0 2 4 Whitelist ESAD-UK 0.62 0.96 0 0 0.59 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 8 30876019 41958223 6 6 101 1 1 2 2 0 0.88 0 8 0 0 8 8 8 34 11 11 79.9 87.14 9.44 2 2 4 Whitelist ESAD-UK 0.93 0 0 0 0.91 1 High confidence ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA Before polyploidization 12 0.06 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 9 21067192 21972473 1 1 101 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 3 5 79.9 69.07 30.25 0 0 2 Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 10 56405844 77460410 1 2 101 1 1 0 0 0 0.57 0.34 4 NA 0 4 3 4 7 5 5 79.9 96.45 0.2 0 3 2 Whitelist ESAD-UK 0.68 0.59 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 11 NA NA 0 0 101 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.26 NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 12 7730854 101089483 1 2 101 1 1 0 0 0 0.57 1 5 0 0 5 3 3 5 3 3 79.9 99.87 0.05 0 3 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 13 64750265 89549804 1 2 101 1 1 0 0 0 0.57 0.59 2 NA 0 NA NA NA NA NA NA 79.9 100 0 0 1 3 Whitelist ESAD-UK 0.68 0.81 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 14 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 15 76611475 76696800 1 1 101 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 79.9 99.9 0 0 1 3 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 16 78614109 78939144 2 2 101 2 0 0 0 0 0.11 0.01 8 0 0 8 3 7 15 4 7 79.9 99.61 0.28 0 2 1 Whitelist ESAD-UK 0.54 0.03 0 0 0.48 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 17 NA NA 0 0 101 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 18 21306832 21510622 1 1 101 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 79.9 99.7 0.26 0 2 3 Whitelist ESAD-UK 0.62 1 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 19 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 20 14845201 14920308 2 2 101 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 9 3 4 79.9 92.93 0.06 0 2 4 Whitelist ESAD-UK 0.54 0.2 0 0 0.48 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 4 0.02 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 21 14544281 43737308 3 6 101 2 2 0 2 0 0.57 0 13 0 0 13 5 6 14 5 6 79.9 8.49 69.19 0 4 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 12 0.06 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 22 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-063 X 80985938 127388204 1 3 101 1 2 0 0 0 0.3 1 6 0 0 6 4 6 8 5 5 79.9 1.98 98.02 0 2 4 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-063 ESAD 0.55 3.2 Eso-AdenoCA NA 6 0.03 stopgain,17_7574003_A_G,CN:3 3 ESAD-UK DO50336 OCCAMS-AH-063 male deceased C15.5 no treatment 53 307 307 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 10.1 ESAD-UK::OCCAMS-AH-064 1 3056655 248040758 1 17 448 4 1 0 1 11 0.11 0 23 0 0 23 4 6 24 4 6 57.76 41.45 54.92 0 3 2 Whitelist ESAD-UK 7 0.54 0.01 0 0 0.48 1 Linked to low confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 23 0.03 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 2 968502 127296039 36 39 448 8 11 8 9 3 0.88 0.09 39 0 0 39 7 25 43 8 8 57.76 42.18 54.84 1 4 3 Whitelist ESAD-UK 0.79 0.25 0 0 0.91 1 High confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 75 0.08 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 3 1926043 196423191 13 53 448 2 5 2 4 40 0.56 0 75 0 0 75 7 9 76 7 11 57.76 79.55 17.19 5 3 4 Whitelist ESAD-UK 0.62 0 0 0 0.64 1 High confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 66 0.07 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 4 151187014 151963477 1 3 448 2 1 0 0 0 0.3 0 3 0 0 NA NA NA NA NA NA 57.76 0.02 99.96 0 2 4 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 6 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 5 NA NA 0 0 448 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 0 NA NA 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 6 23128415 170110169 4 5 448 1 2 0 1 1 0.57 0.01 24 0 0 24 12 24 25 12 12 57.76 85.96 13.89 0 3 4 Whitelist ESAD-UK 0.93 0.04 0 0 0.64 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 9 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 7 64763385 155596659 11 49 448 3 4 3 1 38 0.63 0 48 0 0 48 6 9 64 7 12 57.76 67.19 30.22 2 2 3 Whitelist ESAD-UK 3 0.87 0 0 0 0.71 1 Low confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 60 0.07 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 8 87289431 88580493 4 4 448 1 1 0 2 0 0.57 0.02 2 0 0 NA NA NA 31 8 8 57.76 66.41 33.2 0 3 4 Whitelist ESAD-UK 0.68 0.09 0 0 0.64 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 9 3946166 118111107 1 5 448 2 1 1 0 1 0.57 0.01 13 0 0 13 5 8 13 5 5 57.76 84.41 3.71 0 1 3 Whitelist ESAD-UK 0.62 0.06 0 0 0.64 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 9 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 10 24735394 69149928 1 9 448 0 2 0 1 6 0.3 0.01 12 0 0 12 3 6 16 6 7 57.76 5.78 90.33 0 2 3 Whitelist ESAD-UK 7 0.62 0.03 0 0 0.59 1 Linked to low confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 12 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 11 50639495 64629512 5 5 448 2 1 1 1 0 0.9 0.02 4 0 0 4 0 4 9 3 5 57.76 75.81 23.63 0 1 2 Whitelist ESAD-UK 0.93 0.09 0 0 0.92 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 10 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 12 24766534 25108701 4 5 448 2 1 1 0 1 0.57 0.09 7 0 0 7 3 3 31 5 7 57.76 95.95 0.29 0 8 7 Whitelist ESAD-UK 0.93 0.25 0 0 0.64 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 9 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 13 27991549 115019710 39 40 448 10 9 9 11 1 0.96 0 88 0 0 88 10 34 89 10 18 57.76 31.44 54.23 1 3 2 Whitelist ESAD-UK 0.99 0 0 0 0.98 1 High confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 79 0.09 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 14 80289843 91475402 1 2 448 2 0 0 0 0 0.11 0.03 2 0 0 NA NA NA 5 3 5 57.76 79.97 0.11 0 2 3 Whitelist ESAD-UK 0.54 0.11 0 0 0.48 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 4 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 15 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 16 8170195 89798592 7 29 448 2 1 1 3 22 0.67 0 35 0 0 35 5 8 35 5 8 57.76 89.89 4.97 0 3 2 Whitelist ESAD-UK 3_7 0.57 0 0 0 0.74 1 Low confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 36 0.04 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 17 2063009 41298611 1 4 448 1 0 1 1 1 0.8 0.47 10 0 0 10 3 4 15 3 4 57.76 73.48 21.88 4 4 2 Whitelist ESAD-UK 0.68 0.71 0 0 0.84 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 7 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 18 37064980 37235737 2 2 448 2 0 0 0 0 0.11 0.18 2 0 0 NA NA NA 4 3 4 57.76 99.73 0.2 0 3 NA Whitelist ESAD-UK 0.54 0.4 0 0 0.48 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 4 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 19 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 20 14774996 15234019 6 6 448 6 0 0 0 0 0 1 7 0 0 7 3 4 11 3 4 57.76 99.32 0.06 0 4 3 Whitelist ESAD-UK 0.04 1 0 0 0.03 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 12 0.01 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 21 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 22 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-064 X 10521537 154343000 36 47 448 7 9 10 10 11 0.88 0 91 0 0 91 10 15 92 10 15 57.76 93.2 6.19 4 3 1 Whitelist ESAD-UK 0.94 0 0 0 0.91 1 High confidence ESAD-UK OCCAMS-AH-064 ESAD 0.65 2.65 Eso-AdenoCA With other complex events 83 0.09 NA 3 ESAD-UK DO50337 OCCAMS-AH-064 male deceased C15.5 no treatment 69 517 517 Current smoker (includes daily smokers non-daily/occasional smokers) 22 no None Included Eso-AdenoCA ESAD UK 1 17.01 ESAD-UK::OCCAMS-AH-071 1 30078518 30172011 1 1 134 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 5 3 3 30.37 12.95 87.05 0 2 NA Whitelist ESAD-UK 0.62 0.02 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 2 170276484 170294232 1 1 134 1 0 0 0 0 0.39 0.43 1 0 NA NA NA NA 4 0 3 30.37 0 99.9 0 2 NA Whitelist ESAD-UK 0.62 0.68 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 3 60331422 60747383 3 3 134 3 0 0 0 0 0.03 0.39 4 0 0 4 3 4 17 3 9 30.37 0.66 99.31 0 1 0 Whitelist ESAD-UK 0.41 0.64 0 0 0.33 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 4 54701998 121728471 3 12 134 2 1 2 1 6 0.88 0 4 0 0 4 0 3 6 3 3 30.37 14 85.99 0 2 3 Whitelist ESAD-UK 0.93 0 0 0 0.91 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 18 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 5 NA NA 0 0 134 0 0 0 0 0 NA 0.48 NA 0 NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.72 0 NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 6 29867992 33006367 3 3 134 0 0 1 2 0 0.3 0 4 0 0 4 3 4 23 6 6 30.37 33.64 66.13 0 4 3 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 7 94381893 94454252 1 1 134 1 0 0 0 0 0.39 0.56 2 0 NA NA NA NA 8 0 0 30.37 59.33 40.45 0 2 9 Whitelist ESAD-UK 0.62 0.79 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 8 26605057 141712244 8 9 134 2 0 3 3 1 0.39 0 19 0 0 19 5 10 36 5 5 30.37 30.54 69.45 3 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA With other complex events 17 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 9 7270362 22265584 1 3 134 3 0 0 0 0 0.03 0.5 4 0 0 4 4 4 5 5 5 30.37 0.85 98.45 0 1 2 Whitelist ESAD-UK 0.41 0.74 0 0 0.33 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 10 55047551 58019427 4 4 134 3 1 0 0 0 0.11 1 2 0 0 NA NA NA 4 4 4 30.37 29.02 67.64 0 2 3 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 11 NA NA 0 0 134 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 0 NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 12 NA NA 0 0 134 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.45 NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 13 NA NA 0 0 134 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.26 NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 14 NA NA 0 0 134 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 15 44126372 85657299 1 3 134 2 0 0 0 1 0.11 0.79 1 0 0 NA NA NA NA NA NA 30.37 84.59 0 0 3 NA Whitelist ESAD-UK 0.62 0.94 0 0 0.48 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 16 50256391 78750775 1 3 134 3 0 0 0 0 0.03 0.78 5 0 0 5 3 5 8 3 5 30.37 92.37 3.11 0 0 1 Whitelist ESAD-UK 0.41 0.94 0 0 0.33 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 17 NA NA 0 0 134 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 18 NA NA 0 0 134 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 19 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 20 35135970 35302892 1 1 134 0 0 1 0 0 0.39 0.77 2 NA NA NA NA NA 6 3 3 30.37 96.7 2.3 0 2 4 Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 21 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 22 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-071 X 7965467 31955709 1 4 134 4 0 0 0 0 0.01 0.84 1 0 0 NA NA NA NA NA NA 30.37 99.96 0 0 1 NA Whitelist ESAD-UK 0.21 0.98 0 0 0.16 0 No ESAD-UK OCCAMS-AH-071 ESAD 0.39 2.25 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 ESAD-UK DO50319 OCCAMS-AH-071 male deceased C15.5 no treatment 64 672 672 Current reformed smoker, duration not specified 38 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-077 1 174192477 248687297 1 5 68 3 0 0 0 2 0.03 0.65 5 0 0 5 4 5 6 4 4 87.85 99.77 0 0 4 5 Whitelist ESAD-UK 0.45 0.86 0 0 0.33 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 2 197998996 198144221 1 1 68 0 1 0 0 0 0.39 0.66 2 0 NA NA NA NA 5 3 3 87.85 99.9 0 0 5 8 Whitelist ESAD-UK 0.62 0.87 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 3 11604297 120495857 1 4 68 3 0 0 1 0 0.11 0.33 10 0 0 10 4 8 11 5 9 87.85 99.88 0 0 4 0 Whitelist ESAD-UK 0.54 0.59 0 0 0.48 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 4 25984104 190323442 7 7 68 1 1 2 3 0 0.67 0.02 6 0 0 6 3 4 7 4 4 87.85 36.48 63.34 0 2 4 Whitelist ESAD-UK 0.77 0.09 0 0 0.74 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 14 0.1 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 5 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 6 5671310 111527542 1 3 68 1 2 0 0 0 0.3 0.8 8 0.02 0 8 5 6 11 5 9 87.85 97.16 0 0 5 6 Whitelist ESAD-UK 0.62 0.95 0.02 0 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 7 91041185 150912377 1 4 68 3 0 0 1 0 0.11 0.18 9 0 0 9 5 7 12 5 7 87.85 99.66 0.11 0 3 2 Whitelist ESAD-UK 0.54 0.4 0 0 0.48 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 8 116228303 116248719 1 1 68 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 87.85 99.84 0.01 0 2 4 Whitelist ESAD-UK 0.62 0.51 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 9 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 10 77304147 77428588 1 1 68 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 87.85 99.73 0.09 0 2 4 Whitelist ESAD-UK 0.62 0.63 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 11 38808584 38829853 1 1 68 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 87.85 99.57 0 0 4 NA Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 12 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 13 69907738 73751361 7 7 68 1 1 3 2 0 0.67 0 9 0 0 9 4 5 16 5 5 87.85 54.4 42.82 0 2 12 Whitelist ESAD-UK 0.77 0 0 0 0.74 0 Low confidence ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA With other complex events 14 0.1 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 14 89521469 106687167 1 1 68 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 87.85 83.94 15.44 0 2 3 Whitelist ESAD-UK 0.62 0.9 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 16 78675325 78999567 1 4 68 3 1 0 0 0 0.11 0.04 6 0 0 6 6 6 8 6 7 87.85 99.72 0.19 0 2 4 Whitelist ESAD-UK 0.54 0.13 0 0 0.48 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 17 59422910 59435244 1 1 68 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 87.85 68.22 27.34 0 3 NA Whitelist ESAD-UK 0.62 0.68 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 18 46982006 47312513 1 1 68 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 6 87.85 95.35 0 0 3 6 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 19 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 21 36160737 36232699 1 1 68 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 87.85 69.83 0.15 0 2 4 Whitelist ESAD-UK 0.62 0.79 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 22 34104386 40899036 1 3 68 3 0 0 0 0 0.03 0.05 6 0 0 6 4 6 7 4 7 87.85 99.19 0.81 0 2 4 Whitelist ESAD-UK 0.41 0.16 0 0 0.33 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-077 X 64688937 151547603 1 2 68 1 1 0 0 0 0.57 0.4 7 0 0 7 5 7 8 5 5 87.85 99.65 0 0 4 3 Whitelist ESAD-UK 0.68 0.64 0 0 0.64 0 No ESAD-UK OCCAMS-AH-077 ESAD 0.54 4.09 Eso-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:2 4 ESAD-UK DO50338 OCCAMS-AH-077 female alive C15.5 no treatment 80 884 884 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 29.08 ESAD-UK::OCCAMS-AH-082 1 18920068 175100180 3 17 433 1 2 2 1 11 0.88 0 27 0 0 27 5 18 71 5 8 45.5 45.5 54.49 0 3 2 Whitelist ESAD-UK 0.62 0 0 0 0.91 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 23 0.03 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 2 20418187 235815453 1 18 433 2 13 0 0 3 0 0 29 0 0 29 7 12 30 7 13 45.5 34.46 65.43 1 3 2 Whitelist ESAD-UK 0 0.02 0 0 0 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 33 0.04 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 3 60336556 136469241 2 17 433 6 0 0 0 11 0 0 27 0 0 27 4 10 60 9 11 45.5 72.76 24.16 1 3 4 Whitelist ESAD-UK 1_2_5 0.54 0 0 0 0.03 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 23 0.03 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 4 15704561 169863051 1 11 433 1 6 0 0 4 0 0 17 0 0 17 5 8 21 5 9 45.5 19.52 80.26 0 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.09 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 18 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 5 12699681 171707953 1 22 433 7 8 0 2 5 0.01 0.62 32 0 0 32 6 10 35 6 10 45.5 26.78 73.09 1 2 4 Whitelist ESAD-UK 0.21 0.83 0 0 0.26 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 39 0.05 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 6 52224981 156272848 31 32 433 8 9 6 8 1 0.89 0 62 0 0 62 11 14 70 11 13 45.5 37.07 62.75 18 2 4 Whitelist ESAD-UK 0.98 0 0 0 0.92 1 High confidence ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA With other complex events 63 0.07 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 7 7470865 128023593 1 13 433 4 4 0 0 5 0.05 0.45 24 0 0 24 6 9 25 6 10 45.5 38.59 58.86 1 2 3 Whitelist ESAD-UK 0.62 0.7 0 0 0.46 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 21 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 8 29098575 29568035 2 2 433 0 2 0 0 0 0.11 0.15 3 0 0 NA NA NA 24 4 6 45.5 66.84 29.21 0 2 3 Whitelist ESAD-UK 0.54 0.36 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 9 4031087 118047397 1 10 433 3 4 0 0 3 0.06 0.39 17 0 0 17 8 11 19 9 9 45.5 41.11 56.29 0 2 3 Whitelist ESAD-UK 0.62 0.63 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 17 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 10 31657994 36188941 7 8 433 2 2 1 2 1 0.93 0 19 0 0 19 3 4 59 4 5 45.5 47.34 49.24 0 7 9 Whitelist ESAD-UK 1 0 0 0 0.95 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 15 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 11 67129379 67427056 2 2 433 0 2 0 0 0 0.11 0.49 5 0 0 5 5 5 31 9 9 45.5 79.73 19.7 0 3 4 Whitelist ESAD-UK 0.54 0.74 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 12 562794 120774949 1 7 433 1 5 0 0 1 0.01 0.02 12 0 0 12 9 12 14 9 9 45.5 26.59 69.4 0 2 3 Whitelist ESAD-UK 0.47 0.07 0 0 0.19 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 13 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 13 73843979 74228760 3 3 433 0 2 1 0 0 0.3 0.15 6 0 0 6 0 4 15 3 3 45.5 97.17 0.05 0 4 5 Whitelist ESAD-UK 0.62 0.34 0 0 0.59 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 14 21829464 22522954 2 2 433 1 1 0 0 0 0.57 0.21 4 0 0 4 3 4 28 14 15 45.5 2.44 97.43 0 3 2 Whitelist ESAD-UK 0.68 0.44 0 0 0.64 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 15 40348455 90548965 1 18 433 3 4 0 1 10 0.17 0 19 0 0 19 7 11 26 7 7 45.5 63.09 32 0 2 4 Whitelist ESAD-UK 0.68 0 0 0 0.59 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 26 0.03 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 16 1974531 2048422 2 2 433 1 1 0 0 0 0.57 0 4 0 0 4 0 4 41 5 6 45.5 40.33 54.23 0 3 4 Whitelist ESAD-UK 0.68 0.01 0 0 0.64 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 17 70505392 70852005 2 2 433 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 34 5 7 45.5 13.25 86.75 0 1 0 Whitelist ESAD-UK 0.54 0 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 18 2574615 22179473 2 5 433 2 0 0 0 3 0.11 0.77 8 0 0 8 3 4 12 3 4 45.5 77.55 17.8 0 1 2 Whitelist ESAD-UK 0.45 0.93 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 7 0.01 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 19 42007717 42642455 2 2 433 0 0 1 1 0 0.57 0 4 0 0 4 4 4 28 7 14 45.5 42.3 50.43 0 3 4 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 20 14721783 49216786 2 7 433 2 2 0 0 3 0.26 0 9 0 0 9 4 6 20 5 5 45.5 91.74 1.07 1 4 3 Whitelist ESAD-UK 0.77 0 0 0 0.59 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 11 0.01 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 21 42741391 43146667 2 2 433 0 2 0 0 0 0.11 1 4 0 0 4 0 4 12 3 5 45.5 26.18 51.17 0 2 3 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 22 45722101 45753506 1 2 433 1 0 1 0 0 0.57 1 4 0 0 4 0 3 7 3 5 45.5 99.98 0.02 0 1 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-082 X 10475596 124599809 1 9 433 5 3 0 0 1 0.03 0.06 21 0 0 21 4 7 24 4 6 45.5 50.54 46.09 2 2 3 Whitelist ESAD-UK 0.54 0.19 0 0 0.33 1 No ESAD-UK OCCAMS-AH-082 ESAD 0.18 2.48 Eso-AdenoCA NA 17 0.02 frameshift_deletion,17_7579368_-_A,CN:2 2 ESAD-UK DO50339 OCCAMS-AH-082 female deceased C15.5 no treatment 79 672 672 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 22.11 ESAD-UK::OCCAMS-AH-085 1 111088654 119275178 2 3 170 1 1 0 0 1 0.57 0.32 9 0 0 9 6 9 27 6 7 84.45 100 0 0 5 7 Whitelist ESAD-UK 0.87 0.57 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 5 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 2 212263979 225220936 2 2 170 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 6 5 5 84.45 99.8 0.09 0 4 5 Whitelist ESAD-UK 0.68 0.07 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 4 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 3 60320996 60538713 4 4 170 4 0 0 0 0 0.01 0.55 5 0 0 5 0 4 14 3 5 84.45 99.81 0.04 0 3 2 Whitelist ESAD-UK 0.21 0.77 0 0 0.16 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 8 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 4 44030657 44073032 1 1 170 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA 8 5 5 84.45 81.57 18.42 0 3 4 Whitelist ESAD-UK 0.62 0.08 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 2 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 5 56958115 179216016 1 9 170 4 2 1 1 1 0.39 0.63 14 0 0 14 4 6 15 4 5 84.45 99.85 0.02 0 4 6 Whitelist ESAD-UK 0.62 0.85 0 0 0.59 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 17 0.05 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 6 1806231 161745945 1 5 170 3 0 0 0 2 0.03 0.87 7 0 0 7 5 5 8 5 5 84.45 58.52 41.22 0 2 1 Whitelist ESAD-UK 0.62 1 0 0 0.33 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 8 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 7 97470942 118367362 4 5 170 1 0 2 1 1 0.57 0.01 10 0 0 10 3 4 34 4 5 84.45 84.37 13.02 0 7 8 Whitelist ESAD-UK 0.68 0.03 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 9 0.03 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 8 80599137 83940854 1 2 170 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 9 4 6 84.45 96.58 0 0 4 5 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 4 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 9 33132354 139158900 21 21 170 6 4 9 2 0 0.16 0 19 0 0 19 9 19 32 10 10 84.45 87.95 9.47 0 3 2 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA With other complex events 42 0.12 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 10 34734828 68055540 1 3 170 2 1 0 0 0 0.3 0.1 4 0 0 4 4 4 4 4 4 84.45 96.57 0 0 4 5 Whitelist ESAD-UK 0.62 0.26 0 0 0.59 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 6 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 11 51576491 96159198 12 12 170 2 3 4 3 0 0.88 0 29 0 0 29 3 4 37 6 6 84.45 70.53 28.91 0 8 4 Whitelist ESAD-UK 0.93 0 0 0 0.91 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 24 0.07 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 12 62705001 73645114 2 4 170 1 0 1 2 0 0.57 0.04 14 0 0 14 3 5 24 5 6 84.45 99.86 0.06 0 18 15 Whitelist ESAD-UK 0.68 0.14 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 8 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 13 93912904 94148719 1 1 170 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 84.45 100 0 0 4 NA Whitelist ESAD-UK 0.62 0.12 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 2 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 14 31867414 36702160 2 4 170 0 1 0 1 2 0.57 0.38 2 0 0 NA NA NA 6 3 3 84.45 99.09 0 0 4 6 Whitelist ESAD-UK 1 0.68 0.63 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 6 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 15 NA NA 0 0 170 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.85 NA NA NA 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 0 0 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 16 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 0 0 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 17 70367287 75615154 1 2 170 1 1 0 0 0 0.57 1 4 0 0 4 3 4 8 3 4 84.45 99.98 0 0 4 3 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 4 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 18 NA NA 0 0 170 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.85 NA NA NA 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 0 0 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 19 33422234 55093883 1 3 170 1 1 1 0 0 0.8 0.58 3 0 0 NA NA NA NA NA NA 84.45 99.83 0 0 4 5 Whitelist ESAD-UK 0.87 0.8 0 0 0.84 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 6 0.02 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 20 29880720 29896426 1 1 170 0 1 0 0 0 0.39 0.79 1 NA NA NA NA NA NA NA NA 84.45 99.01 0 0 4 NA Whitelist ESAD-UK 0.62 0.94 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 2 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 21 22371608 42684087 1 2 170 1 1 0 0 0 0.57 0.47 4 NA 0 4 3 4 6 3 4 84.45 70.29 7.06 0 3 1 Whitelist ESAD-UK 0.68 0.71 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 4 0.01 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 22 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 0 0 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-085 X NA NA 0 0 170 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.01 NA NA NA 1 No ESAD-UK OCCAMS-AH-085 ESAD 0.6 4.06 Eso-AdenoCA NA 0 0 NA 39 ESAD-UK DO50340 OCCAMS-AH-085 male alive C15.5 no treatment 71 991 991 Current reformed smoker, duration not specified 0 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 32.6 ESAD-UK::OCCAMS-AH-086 1 234781265 235536939 5 5 619 2 3 0 0 0 0.14 0.88 4 0 0 4 0 3 39 7 7 38.16 31.11 68.86 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 2 12813030 234404523 1 34 619 4 18 0 1 11 0 0.13 37 0 0 37 7 34 38 7 7 38.16 30.85 66.36 0 3 2 Whitelist ESAD-UK 3 0.04 0.32 0 0 0 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 57 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 3 11605138 66344250 3 5 619 0 1 1 1 2 0.8 0.01 25 0 0 25 5 13 58 5 9 38.16 98.87 0.99 0 3 1 Whitelist ESAD-UK 2 0.93 0.05 0 0 0.84 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 4 8173076 187978633 1 33 619 7 9 0 1 16 0 0.63 26 0 0 26 11 24 27 11 11 38.16 10.27 89.71 0 2 1 Whitelist ESAD-UK 16 0.34 0.84 0 0 0.11 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 50 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 5 585953 15644266 2 2 619 1 1 0 0 0 0.57 0 1 0 0.01 NA NA NA 8 8 8 38.16 31.9 67.95 0 2 NA Whitelist ESAD-UK 0.68 0 0 0.01 0.64 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 6 31371870 32273645 3 10 619 0 1 0 2 7 0.3 0.4 10 0 0 10 3 4 45 7 7 38.16 98.66 1.2 0 1 2 Whitelist ESAD-UK 0.86 0.64 0 0 0.59 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 7 26240813 142135544 1 5 619 2 2 0 0 1 0.26 0 4 0 0 4 4 4 4 4 4 38.16 36.67 63.09 1 1 2 Whitelist ESAD-UK 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 8 8145650 138110281 9 13 619 1 2 4 2 4 0.55 0.17 32 0 0 32 7 14 35 7 10 38.16 43.22 56.78 0 3 4 Whitelist ESAD-UK 10 0.68 0.38 0 0 0.64 0 Linked to high confidence ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA With other complex events 22 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 False positive; manually removed ESAD-UK::OCCAMS-AH-086 9 33475892 33830488 2 2 619 0 2 0 0 0 0.11 0.03 4 0 0 4 3 4 19 6 6 38.16 20.74 78.97 0 3 2 Whitelist ESAD-UK 0.54 0.11 0 0 0.48 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 10 43601978 134914515 35 65 619 11 7 9 8 30 0.8 0 113 0 0 113 25 30 127 25 30 38.16 67.83 28.79 2 3 2 Whitelist ESAD-UK 0.87 0 0 0 0.84 0 High confidence ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA With other complex events 100 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 11 5488025 119836664 4 7 619 2 0 1 1 3 0.57 0.7 15 0 0 15 5 7 18 5 8 38.16 4.65 94.79 0 2 3 Whitelist ESAD-UK 0.77 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 12 1246641 123710275 1 18 619 5 5 0 0 8 0.02 0.63 13 0 0 13 7 13 14 8 8 38.16 2.67 97.32 0 2 3 Whitelist ESAD-UK 0.5 0.85 0 0 0.33 0 Linked to high confidence ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA With other complex events 28 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 13 20947378 113930632 1 11 619 3 4 0 0 4 0.06 0.02 14 0 0 14 5 14 15 5 5 38.16 22.63 77.37 0 2 3 Whitelist ESAD-UK 3 0.54 0.08 0 0 0.48 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 18 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 14 102852666 103418543 3 3 619 1 2 0 0 0 0.3 0.73 2 0 0 NA NA NA 26 14 14 38.16 1.75 97.34 0 3 4 Whitelist ESAD-UK 0.62 0.9 0 0 0.59 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 15 42145494 52489913 2 4 619 0 2 1 1 0 0.57 0.27 6 0 0 6 4 4 15 4 7 38.16 33.75 66.25 0 2 3 Whitelist ESAD-UK 0.68 0.51 0 0 0.64 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 16 4274640 88167527 4 25 619 1 2 4 1 17 0.39 0 16 0 0 16 10 14 20 10 10 38.16 6.79 93.11 1 2 3 Whitelist ESAD-UK 3_4 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 33 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 False positive; manually removed ESAD-UK::OCCAMS-AH-086 17 72274216 72548544 4 4 619 1 1 1 1 0 1 0 3 0 0 NA NA NA 30 10 17 38.16 25.25 70.32 0 2 3 Whitelist ESAD-UK 1 0.02 0 0 1 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 18 14096461 19864400 1 2 619 0 2 0 0 0 0.11 0 4 0 0 4 0 4 8 4 5 38.16 90.37 4.3 0 3 2 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 19 1174502 58337393 40 80 619 9 11 10 10 40 0.98 0 103 0 0 103 7 12 104 7 12 38.16 59.59 31.76 2 2 3 Whitelist ESAD-UK 10_12 0.87 0 0 0 0.99 0 High confidence ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA With other complex events 120 0.1 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 20 2981406 15417055 3 6 619 4 0 2 0 0 0.06 0.21 4 0 0 4 3 4 13 5 5 38.16 2.4 90.26 0 2 1 Whitelist ESAD-UK 0.54 0.44 0 0 0.48 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 21 18841423 47999625 1 7 619 0 2 1 1 3 0.57 0.85 8 0 0 8 5 8 9 5 5 38.16 9.57 60.23 0 2 3 Whitelist ESAD-UK 0.96 0.99 0 0 0.64 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 22 24060260 50838601 1 5 619 1 4 0 0 0 0.04 0.85 7 0 0 7 6 7 8 7 7 38.16 0.35 98.74 0 2 3 Whitelist ESAD-UK 0.45 0.99 0 0 0.36 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-086 X 6947670 153640741 1 13 619 7 3 0 1 2 0.02 0.02 16 0 0 16 12 12 18 12 12 38.16 95.77 0.65 0 1 2 Whitelist ESAD-UK 0.54 0.09 0 0 0.27 0 No ESAD-UK OCCAMS-AH-086 ESAD 0.9 2.18 Eso-AdenoCA NA 24 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ESAD-UK DO50341 OCCAMS-AH-086 male deceased C15.5 no treatment 77 629 629 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 20.69 ESAD-UK::OCCAMS-AH-088 1 NA NA 0 0 167 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.03 NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 2 NA NA 0 0 167 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 3 2566344 144517752 1 8 167 6 1 0 0 1 0 0.29 10 0 0 10 4 10 12 5 5 57.01 99.77 0.06 7 3 1 Whitelist ESAD-UK 0.28 0.53 0 0 0.09 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 15 0.04 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 4 37987241 38339549 1 1 167 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 57.01 0.18 99.71 0 2 3 Whitelist ESAD-UK 0.62 1 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 5 58806491 58921902 1 1 167 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 57.01 1.86 98.02 1 2 5 Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 6 147951857 148020433 1 1 167 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA 7 7 7 57.01 99.67 0.05 1 2 3 Whitelist ESAD-UK 0.62 0.49 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 7 53921918 151275079 68 70 167 14 15 19 20 2 0.68 0 69 0 0 69 15 33 74 15 15 57.01 62 35.05 33 2 3 Whitelist ESAD-UK 0.78 0 0 0 0.75 1 High confidence ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA With other complex events 138 0.41 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 8 90615655 128818778 1 3 167 1 2 0 0 0 0.3 0.15 6 0 0 6 3 5 7 3 5 57.01 99.89 0 0 4 3 Whitelist ESAD-UK 0.62 0.36 0 0 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 6 0.02 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 9 126289467 126354558 1 1 167 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 57.01 75.93 23.36 0 4 NA Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 10 NA NA 0 0 167 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.04 NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 11 NA NA 0 0 167 0 0 0 0 0 NA 0.71 NA 0 NA NA NA NA 9 3 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.9 0 NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 12 7815845 128281616 1 3 167 1 1 0 0 1 0.57 0.1 3 NA 0 NA NA NA 4 4 4 57.01 99.92 0 1 3 4 Whitelist ESAD-UK 0.87 0.26 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 5 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 13 20290645 20391662 1 1 167 0 1 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 57.01 0 97.22 0 2 NA Whitelist ESAD-UK 0.62 0.64 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 14 81600942 83629969 2 2 167 1 1 0 0 0 0.57 0.66 3 0 0 NA NA NA 9 3 5 57.01 74.21 22.09 0 2 3 Whitelist ESAD-UK 0.68 0.86 0 0 0.64 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 4 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 15 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 16 78516342 78929377 3 3 167 3 0 0 0 0 0.03 0.46 8 0 0 8 5 7 11 5 7 57.01 99.67 0.24 0 0 1 Whitelist ESAD-UK 0.41 0.71 0 0 0.33 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 6 0.02 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 17 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 18 20416958 22435787 10 10 167 2 4 3 1 0 0.57 0 12 0 0 12 3 5 31 4 5 57.01 90.46 4.89 0 6 8 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 20 0.06 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 19 NA NA 0 0 167 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 20 NA NA 0 0 167 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 21 28297629 30058255 2 2 167 1 1 0 0 0 0.57 0.46 1 0 0 NA NA NA NA NA NA 57.01 0 77.83 0 2 NA Whitelist ESAD-UK 0.68 0.71 0 0 0.64 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 4 0.01 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 22 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-088 X 6053102 121537948 1 3 167 3 0 0 0 0 0.03 0.05 4 0.01 0 4 3 4 5 3 5 57.01 0.23 99.77 1 2 0 Whitelist ESAD-UK 0.41 0.17 0.01 0 0.33 1 No ESAD-UK OCCAMS-AH-088 ESAD 0.46 2.71 Eso-AdenoCA NA 6 0.02 frameshift_insertion,17_7578194_CACCA_-,CN:2 3 ESAD-UK DO50342 OCCAMS-AH-088 male deceased C15.5 no treatment 66 198 198 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 6.51 ESAD-UK::OCCAMS-AH-091 1 185753479 185765165 1 1 217 0 1 0 0 0 0.39 0.16 1 0 NA NA NA NA 10 6 10 85.71 97.03 0 0 4 NA Whitelist ESAD-UK 0.62 0.37 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 2 43887495 205830295 1 11 217 3 1 0 0 7 0.11 0.71 5 0 0 5 3 5 6 3 3 85.71 97.27 0.04 0 4 2 Whitelist ESAD-UK 13 0.68 0.9 0 0 0.48 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 3 335300 73997364 6 12 217 1 1 2 2 6 0.88 0 12 0 0 12 3 7 18 4 4 85.71 94.58 2.34 3 3 5 Whitelist ESAD-UK 0.93 0 0 0 0.91 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 4 NA NA 0 0 217 0 0 0 0 0 NA 0.34 NA 0 NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.59 0 NA NA 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 5 58811997 58979396 1 1 217 1 0 0 0 0 0.39 0.12 2 0 NA NA NA NA 7 3 4 85.71 97.33 0 0 0 1 Whitelist ESAD-UK 0.62 0.31 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 6 97713679 170207401 21 24 217 7 3 7 4 3 0.49 0 21 0 0 21 3 5 29 3 5 85.71 99.87 0 0 8 11 Whitelist ESAD-UK 0.62 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 45 0.1 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 7 38050617 65389788 3 5 217 0 0 2 1 2 0.3 0.03 6 0 0 6 4 4 16 4 5 85.71 99.78 0 0 5 6 Whitelist ESAD-UK 0.93 0.12 0 0 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 8 58094973 115565669 1 3 217 1 1 0 1 0 0.8 0.76 1 0 0 NA NA NA NA NA NA 85.71 99.99 0 0 6 NA Whitelist ESAD-UK 0.87 0.92 0 0 0.84 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 9 508894 82817529 2 4 217 0 1 2 1 0 0.57 0.38 10 0 0 10 5 9 14 6 10 85.71 99.3 0 0 4 5 Whitelist ESAD-UK 0.68 0.63 0 0 0.64 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 10 77162822 77302026 1 1 217 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA 6 4 4 85.71 99.82 0 0 4 7 Whitelist ESAD-UK 0.62 0.08 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 11 9785847 72206701 5 6 217 1 1 1 2 1 0.9 0.02 10 0 0 10 5 6 15 6 6 85.71 91.05 5.19 0 5 4 Whitelist ESAD-UK 0.93 0.09 0 0 0.92 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 12 NA NA 0 0 217 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 0 NA NA 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 13 33254080 73720040 1 2 217 1 1 0 0 0 0.57 0 8 0 0 8 5 7 10 5 8 85.71 99.93 0.07 0 5 6 Whitelist ESAD-UK 0.68 0.02 0 0 0.64 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 14 36386438 36400748 1 1 217 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 85.71 96.29 0 0 4 NA Whitelist ESAD-UK 0.62 1 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 15 41643184 41672553 1 1 217 0 0 0 1 0 0.39 0.68 1 0 NA NA NA NA NA NA NA 85.71 99.9 0 0 4 NA Whitelist ESAD-UK 0.62 0.88 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 16 78593409 78686247 1 1 217 1 0 0 0 0 0.39 0.2 2 0 NA NA NA NA 4 3 3 85.71 95.48 0 0 0 4 Whitelist ESAD-UK 0.62 0.42 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 17 57932043 57967879 1 1 217 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 4 85.71 95.56 0 0 4 6 Whitelist ESAD-UK 0.62 1 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 18 21031530 50516912 1 3 217 1 1 0 0 1 0.57 0.67 5 0 0 5 3 4 7 3 3 85.71 4.54 90.82 0 2 1 Whitelist ESAD-UK 0.62 0.87 0 0 0.64 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 19 NA NA 0 0 217 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 20 NA NA 0 0 217 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.59 NA NA NA 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 21 NA NA 0 0 217 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 22 46418358 46508587 1 1 217 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 85.71 100 0 0 4 NA Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-091 X 7263607 66500875 1 3 217 2 1 0 0 0 0.3 0.03 9 0 0 9 3 7 10 3 7 85.71 0.42 99.58 0 2 0 Whitelist ESAD-UK 0.62 0.11 0 0 0.59 0 No ESAD-UK OCCAMS-AH-091 ESAD 0.56 4.3 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:4 4 ESAD-UK DO50320 OCCAMS-AH-091 male alive C15.5 no treatment 67 2029 2029 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 66.74 ESAD-UK::OCCAMS-AH-096 1 1424573 68150649 5 9 326 1 0 3 1 4 0.28 1 19 0 0 19 4 6 38 5 9 54.52 70.59 26.44 0 4 3 Whitelist ESAD-UK 0.41 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 2 42642674 236844841 1 14 326 4 1 0 0 9 0.04 0.04 20 0 0 20 11 14 21 11 11 54.52 96.23 1.09 0 3 2 Whitelist ESAD-UK 0.62 0.13 0 0 0.36 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 3 60306000 195447856 1 5 326 5 0 0 0 0 0 0 6 0 0 6 5 6 7 5 7 54.52 0.21 99.74 0 2 1 Whitelist ESAD-UK 0.1 0 0 0 0.07 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 4 79476864 87192309 1 2 326 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 10 5 5 54.52 12.62 87.36 0 1 2 Whitelist ESAD-UK 0.68 0.06 0 0 0.64 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 5 94810226 141019163 3 4 326 0 1 1 1 1 0.8 0.17 10 0 0 10 8 10 18 11 11 54.52 43.1 56.78 0 2 3 Whitelist ESAD-UK 0.68 0.38 0 0 0.84 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 6 8595627 11484034 3 4 326 0 0 2 1 1 0.3 1 3 0 0 NA NA NA 31 7 14 54.52 86.21 10.96 2 2 3 Whitelist ESAD-UK 0.68 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 7 128410689 129435709 5 6 326 2 1 1 1 1 0.9 0.11 9 0 0 9 6 9 34 6 9 54.52 55.8 43.97 1 1 2 Whitelist ESAD-UK 0.68 0.29 0 0 0.92 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 8 43640589 128902406 1 4 326 1 1 1 0 1 0.8 0.01 3 0 0 NA NA NA 4 3 3 54.52 93.98 6.02 0 3 4 Whitelist ESAD-UK 0.68 0.05 0 0 0.84 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 9 26891631 120922034 1 6 326 1 4 0 0 1 0.04 0.06 7 0 0 7 5 7 8 5 5 54.52 22.89 76.41 0 2 3 Whitelist ESAD-UK 0.54 0.19 0 0 0.36 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 10 132414393 133029749 2 2 326 0 0 1 1 0 0.57 0.9 3 0 0 NA NA NA 15 15 15 54.52 99.82 0 1 4 3 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 11 63032046 128045151 12 24 326 2 2 4 4 12 0.72 0 39 0 0 39 4 6 44 4 6 54.52 87.24 9.06 2 8 3 Whitelist ESAD-UK 0.87 0 0 0 0.8 1 Low confidence ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA With other complex events 36 0.06 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 12 76416245 125793876 2 9 326 4 0 0 0 5 0.01 0.02 7 0 0 7 4 7 14 7 7 54.52 65.72 34.2 0 2 3 Whitelist ESAD-UK 0.62 0.07 0 0 0.16 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 13 31521078 109786869 1 5 326 1 1 0 0 3 0.57 0.28 3 0 0 NA NA NA NA NA NA 54.52 0.16 99.84 1 2 1 Whitelist ESAD-UK 0.68 0.53 0 0 0.64 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 14 NA NA 0 0 326 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.29 0 NA NA 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 15 NA NA 0 0 326 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.25 NA NA NA 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 16 6597595 78720946 1 9 326 3 2 0 0 4 0.14 0.23 8 0 0 8 3 6 11 5 7 54.52 24.27 71.21 0 1 2 Whitelist ESAD-UK 0.62 0.47 0 0 0.59 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 17 13953927 72034705 1 5 326 2 0 0 0 3 0.11 0.49 5 0 0 5 4 5 6 4 4 54.52 99.8 0.2 0 3 4 Whitelist ESAD-UK 0.68 0.74 0 0 0.48 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 18 753809 1110376 1 2 326 0 1 0 0 1 0.39 1 3 0.11 NA NA NA NA 8 4 4 54.52 73.09 26.87 0 3 4 Whitelist ESAD-UK 0.68 1 0.11 NA 0.59 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 3 0 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 19 27855418 58222100 70 75 326 16 18 18 18 5 0.98 0 98 0 0 98 6 7 98 6 6 54.52 42.26 48.93 9 8 7 Whitelist ESAD-UK 22 0.93 0 0 0 0.99 1 Low confidence ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA With other complex events 145 0.22 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 20 5722029 15790006 3 5 326 0 0 2 1 2 0.3 0.08 8 0 0 8 4 4 13 6 6 54.52 92.98 0 0 3 4 Whitelist ESAD-UK 0.62 0.23 0 0 0.59 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 21 26404856 36421000 1 2 326 1 1 0 0 0 0.57 1 6 0 0 6 3 5 8 3 3 54.52 76.2 0 0 0 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 22 16884779 49630408 6 12 326 2 0 1 3 6 0.34 0 25 0 0 25 8 21 25 8 21 54.52 62.31 26.58 0 3 2 Whitelist ESAD-UK 0.93 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-096 X 2816450 98854048 1 6 326 1 1 1 0 3 0.8 0.03 7 0 0 7 3 3 10 5 5 54.52 0.05 99.72 0 2 1 Whitelist ESAD-UK 0.62 0.11 0 0 0.84 1 No ESAD-UK OCCAMS-AH-096 ESAD 0.26 2.74 Eso-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:3 3 ESAD-UK DO50314 OCCAMS-AH-096 female deceased C15.5 no treatment 81 1710 1710 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 56.25 ESAD-UK::OCCAMS-AH-108 1 14762549 207253876 1 4 162 2 1 0 0 1 0.3 0.06 7 0 0 7 5 6 7 5 6 44.67 42.47 54.56 0 4 2 Whitelist ESAD-UK 0.62 0.18 0 0 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 2 11411399 241576299 1 8 162 3 1 0 1 3 0.28 1 11 0 0 11 7 11 11 7 7 44.67 97.31 2.58 0 3 2 Whitelist ESAD-UK 0.87 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 13 0.04 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 3 60391444 97188921 1 2 162 2 0 0 0 0 0.11 0.02 2 0 0 NA NA NA 6 4 4 44.67 6.2 93.75 1 1 2 Whitelist ESAD-UK 0.54 0.08 0 0 0.48 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 4 NA NA 0 0 162 0 0 0 0 0 NA 0.27 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.51 0 NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 5 59326873 59348948 1 1 162 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 3 3 44.67 25.48 71.86 0 1 2 Whitelist ESAD-UK 0.62 0.06 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 6 161624058 163523116 1 2 162 2 0 0 0 0 0.11 0.14 4 0 0 4 3 4 7 3 7 44.67 99.67 0.08 0 4 2 Whitelist ESAD-UK 0.54 0.33 0 0 0.48 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 7 87040494 110502197 1 2 162 1 0 0 1 0 0.57 0.01 3 NA 0 NA NA NA 4 4 4 44.67 99.78 0 0 4 3 Whitelist ESAD-UK 0.68 0.06 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 8 55295207 74921111 2 2 162 0 0 1 1 0 0.57 0.72 5 0 0 5 0 4 17 6 6 44.67 96.58 0 0 4 5 Whitelist ESAD-UK 0.68 0.9 0 0 0.64 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 9 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 10 53320100 53360581 1 1 162 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA 4 4 4 44.67 57 42.83 0 2 3 Whitelist ESAD-UK 0.62 0.7 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 11 65242252 66150441 1 1 162 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA NA NA NA 44.67 0.67 98.9 0 1 2 Whitelist ESAD-UK 0.62 0.7 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 12 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 13 89617812 89665825 1 1 162 1 0 0 0 0 0.39 0.67 2 0 NA NA NA NA 6 6 6 44.67 100 0 0 7 8 Whitelist ESAD-UK 0.62 0.87 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 14 NA NA 0 0 162 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.2 NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 15 66839734 67386854 1 2 162 0 0 1 1 0 0.57 0.63 2 0 0 NA NA NA 4 4 4 44.67 39.92 59.91 0 2 3 Whitelist ESAD-UK 0.68 0.85 0 0 0.64 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 16 NA NA 0 0 162 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 17 614159 62917745 80 80 162 22 19 19 20 0 0.96 0 102 0 0 102 7 7 103 7 7 44.67 34.89 60.67 7 8 4 Whitelist ESAD-UK 0.98 0 0 0 0.97 1 High confidence ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA With other complex events 160 0.49 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 18 51907275 51920134 1 1 162 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA 4 4 4 44.67 37.56 62.41 0 1 NA Whitelist ESAD-UK 0.62 0.59 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 19 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 20 14648170 39808820 1 3 162 3 0 0 0 0 0.03 0.78 6 0 0 6 3 6 9 3 7 44.67 99.02 0 0 5 4 Whitelist ESAD-UK 0.41 0.94 0 0 0.33 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 21 19802561 41893624 6 6 162 2 2 1 1 0 0.88 0 10 0 0 10 5 10 10 5 5 44.67 30.28 39.69 0 2 3 Whitelist ESAD-UK 0.93 0 0 0 0.91 1 Low confidence ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA With other complex events 12 0.04 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 22 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-108 X 62557927 62770253 1 1 162 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA 6 5 5 44.67 96.33 3.67 0 3 NA Whitelist ESAD-UK 0.62 0.08 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-108 ESAD 0.47 2.83 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 ESAD-UK DO50343 OCCAMS-AH-108 male alive C15.5 no treatment 77 169 169 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 5.56 ESAD-UK::OCCAMS-AH-112 1 1979872 212827045 14 24 221 5 2 3 4 10 0.7 0 41 0 0 41 21 33 49 21 23 36.34 47.43 49.45 0 1 2 Whitelist ESAD-UK 12_4 0.62 0 0 0 0.78 1 High confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA With other complex events 38 0.09 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 2 23859234 191789699 11 14 221 3 2 3 3 3 0.97 0.9 14 0 0 14 11 14 19 13 13 36.34 3 96.9 0 2 1 Whitelist ESAD-UK 0.98 1 0 0 0.98 1 High confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA Canonical without polyploidization 25 0.06 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 3 60268856 60779864 3 3 221 3 0 0 0 0 0.03 0.43 6 0 0 6 5 6 11 5 5 36.34 0.46 99.42 0 1 0 Whitelist ESAD-UK 0.41 0.68 0 0 0.33 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 6 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 4 5188482 185655429 16 48 221 5 4 1 6 32 0.32 0 54 0 0 54 10 21 58 10 21 36.34 52.29 47.61 0 1 2 Whitelist ESAD-UK 1_10_12_5_9 0.9 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA With other complex events 64 0.14 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 5 110689915 118671116 6 16 221 1 1 3 1 10 0.57 0 8 0 0 8 8 8 13 13 13 36.34 99.86 0 0 0 1 Whitelist ESAD-UK 9 0.95 0.01 0 0 0.64 1 High confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA Canonical without polyploidization 22 0.05 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 6 33998770 150049066 1 5 221 4 0 0 0 1 0.01 0.02 6 0 0 6 6 6 7 7 7 36.34 0.16 99.68 0 1 2 Whitelist ESAD-UK 0.1 0.06 0 0 0.16 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 9 0.02 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 7 98000451 98150439 3 3 221 1 0 1 1 0 0.8 0.01 1 0 0 NA NA NA 11 7 7 36.34 0.66 99.12 0 2 NA Whitelist ESAD-UK 0.87 0.03 0 0 0.84 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 6 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 8 100099348 128468223 1 3 221 1 2 0 0 0 0.3 0.22 5 0 0 5 3 5 5 3 3 36.34 0.27 99.72 0 2 3 Whitelist ESAD-UK 0.62 0.45 0 0 0.59 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 6 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 9 2688258 130163538 10 34 221 3 2 2 3 24 0.94 0 35 0 0 35 11 19 38 11 19 36.34 22.75 77.12 1 1 2 Whitelist ESAD-UK 4_5 0.97 0 0 0 0.96 1 High confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA With other complex events 44 0.1 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 10 23310943 61673312 1 6 221 2 0 0 0 4 0.11 0.42 4 0 0 4 4 4 5 5 5 36.34 99.83 0 0 0 1 Whitelist ESAD-UK 4 0.68 0.67 0 0 0.48 1 Linked to high confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA Canonical without polyploidization 8 0.02 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 11 3368769 12847106 1 4 221 3 1 0 0 0 0.11 0.75 8 0 0 8 4 8 11 4 4 36.34 21.96 77.62 0 1 2 Whitelist ESAD-UK 0.54 0.92 0 0 0.48 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 8 0.02 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 12 8323902 14885238 1 13 221 2 0 0 0 11 0.11 0.26 5 0 0 5 5 5 7 7 7 36.34 0.46 99.45 0 1 2 Whitelist ESAD-UK 1_3_4 0.99 0.5 0 0 0.48 1 Linked to high confidence ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA Canonical without polyploidization 15 0.03 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 13 NA NA 0 0 221 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 14 67052322 67099138 1 1 221 0 1 0 0 0 0.39 0.33 1 0 NA NA NA NA NA NA NA 36.34 84.72 14.4 0 1 NA Whitelist ESAD-UK 0.62 0.59 0 NA 0.59 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 2 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 15 92401838 92529528 1 1 221 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 36.34 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.13 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 2 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 16 6071137 6748976 3 3 221 3 0 0 0 0 0.03 0.84 6 0 0 6 5 6 13 6 6 36.34 1.14 98.77 0 1 0 Whitelist ESAD-UK 0.41 0.97 0 0 0.33 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 6 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 17 2261999 69128338 2 2 221 0 1 1 0 0 0.57 0.3 5 0 0 5 5 5 6 6 6 36.34 18.76 76.79 0 2 3 Whitelist ESAD-UK 0.68 0.54 0 0 0.64 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 18 8371549 30034994 1 4 221 3 1 0 0 0 0.11 0.54 8 0 0 8 7 8 9 7 7 36.34 94.32 0.06 0 1 0 Whitelist ESAD-UK 0.54 0.77 0 0 0.48 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 8 0.02 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 19 39208591 39297366 2 2 221 0 1 0 1 0 0.57 0.34 3 NA 0 NA NA NA 4 0 3 36.34 0.15 99.68 0 2 3 Whitelist ESAD-UK 0.68 0.59 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 20 14611309 16001587 1 3 221 3 0 0 0 0 0.03 0.64 6 0 0 6 6 6 7 7 7 36.34 97.53 1.5 0 2 3 Whitelist ESAD-UK 0.41 0.85 0 0 0.33 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 6 0.01 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 21 36241224 37141991 1 1 221 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 36.34 1.87 75.48 1 1 2 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 2 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 22 NA NA 0 0 221 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-112 X 46159295 46243874 1 1 221 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 36.34 99.95 0.05 0 1 2 Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-112 ESAD 0.71 1.82 Eso-AdenoCA NA 2 0 NA 2 ESAD-UK DO50321 OCCAMS-AH-112 male deceased C15.5 no treatment 83 320 320 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 10.53 ESAD-UK::OCCAMS-AH-127 1 14480826 16218138 1 3 148 2 0 1 0 0 0.3 0.09 3 0 0 NA NA NA NA NA NA 67.16 99.89 0.11 0 3 2 Whitelist ESAD-UK 0.62 0.25 0 0 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 2 5457516 205931056 1 6 148 2 2 0 0 2 0.26 0.55 8 0 0 8 5 8 9 5 5 67.16 96.93 2.98 2 4 2 Whitelist ESAD-UK 0.54 0.78 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA Before polyploidization 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 3 60178852 60685999 5 5 148 4 0 1 0 0 0.04 0.01 9 0 0 9 5 9 17 5 7 67.16 52.97 43.97 0 1 2 Whitelist ESAD-UK 0.45 0.04 0 0 0.36 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 4 91169800 91352335 1 2 148 2 0 0 0 0 0.11 0.02 3 0 0 NA NA NA NA NA NA 67.16 0.01 99.8 0 2 1 Whitelist ESAD-UK 0.54 0.08 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 5 58722412 160120380 1 3 148 2 0 0 0 1 0.11 0.09 5 0 0 5 4 5 7 4 4 67.16 73.97 23.37 1 2 3 Whitelist ESAD-UK 0.62 0.24 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 6 1715867 69391616 1 2 148 1 0 1 0 0 0.57 0.39 4 0 0.04 4 3 4 7 4 4 67.16 66.32 33.53 1 4 2 Whitelist ESAD-UK 0.68 0.63 0 0.04 0.64 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 7 85512893 90938590 3 7 148 0 2 0 4 1 0.06 0 23 0 0 23 3 3 44 3 4 67.16 60.7 36.55 3 20 22 Whitelist ESAD-UK 0.62 0 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 13 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 8 24116542 40417339 6 6 148 1 2 1 2 0 0.88 0 11 0 0 11 4 7 23 4 9 67.16 98.67 1.22 0 3 4 Whitelist ESAD-UK 0.93 0.01 0 0 0.91 0 Low confidence ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA With other complex events 12 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 9 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 10 32586288 108384340 1 7 148 4 0 0 0 3 0.01 0.84 10 0 0 10 4 4 11 5 5 67.16 81.51 18.32 0 3 5 Whitelist ESAD-UK 0.62 0.98 0 0 0.16 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 11 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 11 102162408 102407025 3 3 148 2 0 0 1 0 0.3 0.33 3 0 0 NA NA NA 6 3 4 67.16 99.57 0 0 3 4 Whitelist ESAD-UK 0.62 0.58 0 0 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 12 21670505 75969433 8 10 148 3 1 2 2 2 0.8 0 15 0 0 15 4 6 26 4 6 67.16 96.27 0.05 1 4 3 Whitelist ESAD-UK 2 0.86 0.01 0 0 0.84 0 Low confidence ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA With other complex events 18 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 13 NA NA 0 0 148 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.74 0 NA NA 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 14 40742329 95623864 1 4 148 3 1 0 0 0 0.11 1 4 0 0 4 3 4 5 3 3 67.16 98.96 0.15 0 3 2 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 15 60704260 60715238 1 1 148 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 67.16 0 99.87 0 2 NA Whitelist ESAD-UK 0.62 0.42 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 16 78436666 78907683 1 2 148 2 0 0 0 0 0.11 0.8 2 0 0 NA NA NA 5 3 3 67.16 92.96 2.49 0 0 3 Whitelist ESAD-UK 0.54 0.95 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 17 70529423 70861831 1 1 148 1 0 0 0 0 0.39 0.8 2 0 NA NA NA NA NA NA NA 67.16 99.99 0 0 1 3 Whitelist ESAD-UK 0.62 0.95 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 18 1884804 61969823 1 2 148 0 1 1 0 0 0.57 1 4 0.08 0.04 4 4 4 5 5 5 67.16 95.35 0 0 3 4 Whitelist ESAD-UK 0.68 1 0.08 0.04 0.64 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 19 NA NA 0 0 148 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 20 14742279 15194827 2 2 148 2 0 0 0 0 0.11 0.14 2 0 0 NA NA NA 7 4 4 67.16 92.8 0 0 5 6 Whitelist ESAD-UK 0.54 0.34 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 21 37682282 37712287 1 1 148 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 67.16 69.43 7.92 0 3 5 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 22 25539933 25565923 1 1 148 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 67.16 99.95 0.05 0 2 3 Whitelist ESAD-UK 0.62 0.89 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-127 X 7332496 96132193 1 4 148 3 1 0 0 0 0.11 0.26 4 0 0 4 3 4 5 3 3 67.16 0.04 99.96 4 2 1 Whitelist ESAD-UK 0.54 0.5 0 0 0.48 0 No ESAD-UK OCCAMS-AH-127 ESAD 0.36 3.12 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7578526_A_C,CN:3 4 ESAD-UK DO50345 OCCAMS-AH-127 male alive C15.5 no treatment 75 533 533 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 17.53 ESAD-UK::OCCAMS-AH-131 1 238948794 242363264 2 2 266 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 18 7 7 58.48 95.1 1.93 0 2 3 Whitelist ESAD-UK 0.68 0.02 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 2 144650795 154356719 2 4 266 0 0 2 2 0 0.26 0.12 3 0 0 NA NA NA 16 8 10 58.48 5.57 94.34 0 1 2 Whitelist ESAD-UK 0.62 0.31 0 0 0.59 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 3 60194449 60795303 3 3 266 2 1 0 0 0 0.3 0.15 9 0 0 9 4 6 32 9 9 58.48 99.7 0.27 0 0 2 Whitelist ESAD-UK 0.62 0.35 0 0 0.59 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 4 190251874 190269844 4 8 266 3 1 0 0 4 0.11 0.08 3 0 0 NA NA NA 26 9 9 58.48 1.86 97.75 0 1 8 Whitelist ESAD-UK 0.41 0.24 0 0 0.48 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 5 54901517 55054817 2 2 266 0 0 1 1 0 0.57 0.61 2 0 0 NA NA NA 15 4 4 58.48 33.67 66.21 0 2 3 Whitelist ESAD-UK 0.68 0.83 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 6 38358441 42273299 14 20 266 5 2 3 4 6 0.7 0 18 0 0 18 3 3 63 9 10 58.48 76.12 20.71 4 8 3 Whitelist ESAD-UK 0.86 0 0 0 0.78 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 34 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 7 65464243 110913901 2 5 266 3 1 0 0 1 0.11 0.89 8 0 0 8 3 7 16 3 4 58.48 98.96 0.82 0 4 2 Whitelist ESAD-UK 0.45 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 8 74740233 78745927 1 2 266 0 2 0 0 0 0.11 0.01 4 0 0 4 4 4 6 5 5 58.48 67.14 29.45 0 3 4 Whitelist ESAD-UK 0.54 0.05 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA After polyploidization 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 9 8965045 122990929 1 5 266 4 1 0 0 0 0.04 0.2 11 0 0 11 6 11 13 7 7 58.48 64.52 32.12 1 2 1 Whitelist ESAD-UK 0.45 0.43 0 0 0.36 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 10 58589218 122290525 1 6 266 2 2 0 1 1 0.53 0.14 9 0 0 9 5 9 10 5 5 58.48 99.76 0.07 0 3 2 Whitelist ESAD-UK 0.62 0.34 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 11 582902 92157751 1 2 266 1 1 0 0 0 0.57 0.14 7 0 0.04 7 3 5 8 3 3 58.48 20.49 79.08 0 1 2 Whitelist ESAD-UK 0.68 0.34 0 0.04 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 12 2691028 50708442 1 4 266 1 0 0 1 2 0.57 1 8 0 0 8 3 4 9 4 4 58.48 99.92 0 0 3 8 Whitelist ESAD-UK 0.54 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 13 55765690 73569092 1 3 266 2 1 0 0 0 0.3 0.4 6 0 0 6 6 6 10 9 9 58.48 100 0 0 3 4 Whitelist ESAD-UK 0.62 0.64 0 0 0.59 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 14 22399406 106374496 17 21 266 3 3 5 6 4 0.66 0 39 0 0 39 5 6 43 5 6 58.48 28.4 52.89 5 3 2 Whitelist ESAD-UK 8 0.76 0 0 0 0.74 0 Low confidence ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA With other complex events 38 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 15 NA NA 0 0 266 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 16 11272468 78876371 2 4 266 2 0 1 1 0 0.57 0.01 17 0 0 17 8 16 25 8 8 58.48 53.25 46.65 0 1 2 Whitelist ESAD-UK 0.68 0.03 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 17 NA NA 0 0 266 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.05 NA NA NA 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 18 55542165 55815395 2 2 266 0 0 1 1 0 0.57 0.13 4 0 0 4 4 4 9 6 6 58.48 95.35 0 0 3 4 Whitelist ESAD-UK 0.68 0.32 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 19 1630941 14031923 1 2 266 0 1 0 1 0 0.57 0.26 8 0 0 8 4 5 18 6 10 58.48 25.08 74.74 0 1 2 Whitelist ESAD-UK 0.68 0.5 0.01 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 20 14899125 15141604 2 2 266 2 0 0 0 0 0.11 0.29 4 0 0 4 3 4 12 7 8 58.48 98.86 0.16 0 3 4 Whitelist ESAD-UK 0.54 0.54 0 0 0.48 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 21 14851387 34692349 5 5 266 2 2 0 1 0 0.53 0.02 12 0 0 12 4 10 17 5 5 58.48 73.16 4.19 0 1 2 Whitelist ESAD-UK 0.68 0.07 0 0 0.64 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 22 NA NA 0 0 266 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-131 X 7018565 122748591 1 7 266 6 1 0 0 0 0 0.58 3 0 0 NA NA NA NA NA NA 58.48 100 0 0 1 3 Whitelist ESAD-UK 0.13 0.8 0 0 0.09 0 No ESAD-UK OCCAMS-AH-131 ESAD 0.53 2.63 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 ESAD-UK DO50346 OCCAMS-AH-131 male deceased C15.5 no treatment 65 593 593 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 19.51 ESAD-UK::OCCAMS-AH-135 1 97804413 214380412 1 13 298 2 3 1 1 6 0.67 0.39 20 0 0 20 4 7 24 5 7 60.44 74.89 22.14 3 3 2 Whitelist ESAD-UK 0.68 0.64 0 0 0.74 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 2 222710966 222946503 2 3 298 1 0 1 0 1 0.57 0.01 3 0 0 NA NA NA 14 7 9 60.44 97.3 0 0 3 4 Whitelist ESAD-UK 0.87 0.04 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 3 60226444 60626956 2 2 298 2 0 0 0 0 0.11 1 4 0 0 4 3 4 24 3 5 60.44 65.57 31.01 0 1 0 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 4 69546212 185627992 1 9 298 2 2 0 0 5 0.26 0.3 11 0 0 11 4 6 13 5 5 60.44 2.2 97.78 0 2 3 Whitelist ESAD-UK 0.62 0.54 0 0 0.59 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 5 29118627 180500252 7 16 298 2 0 2 3 9 0.44 0 37 0 0 37 5 13 41 5 7 60.44 25 72.32 1 2 3 Whitelist ESAD-UK 6 0.79 0.01 0 0 0.64 0 Low confidence ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA With other complex events 23 0.04 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 6 39890387 56314680 9 14 298 4 2 2 1 5 0.55 0 27 0 0 27 5 7 43 5 7 60.44 66.71 30.43 0 2 3 Whitelist ESAD-UK 5 0.62 0 0 0 0.64 0 Low confidence ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA With other complex events 23 0.04 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 7 24306872 138562308 3 13 298 2 0 0 1 10 0.3 0.12 21 0 0 21 8 9 27 9 9 60.44 45.84 51.43 0 2 3 Whitelist ESAD-UK 6 0.9 0.31 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA With other complex events 16 0.03 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 False positive; manually removed ESAD-UK::OCCAMS-AH-135 8 1370025 32113556 8 9 298 2 5 0 1 1 0.07 0.08 7 0 0 7 0 4 16 4 4 60.44 91.57 8.43 1 3 1 Whitelist ESAD-UK 0.54 0.24 0 0 0.48 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 9 130577552 130963639 2 2 298 0 0 1 1 0 0.57 0.37 4 0 0 4 0 4 15 3 8 60.44 66 30.89 0 1 2 Whitelist ESAD-UK 0.68 0.62 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 10 123956903 124211142 2 2 298 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 53 7 10 60.44 95.85 3.97 0 3 4 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 11 41887275 103067905 6 7 298 2 1 1 2 1 0.88 0.89 19 0 0 19 10 10 27 10 10 60.44 54.35 41.85 0 3 4 Whitelist ESAD-UK 0.77 1 0 0 0.91 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 False positive; manually removed ESAD-UK::OCCAMS-AH-135 12 49111279 122208563 1 7 298 0 4 1 0 2 0.04 0.68 9 0 0 9 5 9 19 5 7 60.44 36.03 60.29 0 3 2 Whitelist ESAD-UK 0.47 0.88 0 0 0.36 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 13 20673819 113099679 4 7 298 2 1 1 0 3 0.57 0.02 14 0 0 14 5 8 14 5 8 60.44 87.4 12.6 6 5 6 Whitelist ESAD-UK 0.77 0.09 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 14 49323769 53654370 3 6 298 1 1 1 0 3 0.8 0.13 11 0 0 11 8 8 22 9 9 60.44 95.49 0.81 0 4 6 Whitelist ESAD-UK 0.93 0.32 0 0 0.84 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 15 31119439 57310172 1 2 298 1 1 0 0 0 0.57 0.07 2 0 0 NA NA NA NA NA NA 60.44 99.87 0 0 3 5 Whitelist ESAD-UK 0.68 0.22 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 16 63640095 63689420 2 2 298 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 17 9 9 60.44 86.41 13.56 0 3 5 Whitelist ESAD-UK 0.68 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 17 12865821 73171676 1 9 298 0 2 1 0 6 0.3 0.28 7 0 0 7 0 5 10 3 5 60.44 70.51 23.92 0 4 1 Whitelist ESAD-UK 0.68 0.52 0 0 0.59 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 18 12846117 22434489 1 2 298 0 1 0 1 0 0.57 0.47 5 0 0 5 3 4 12 3 5 60.44 76.53 18.82 0 6 4 Whitelist ESAD-UK 0.68 0.71 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 19 2485041 54283335 2 10 298 1 1 1 1 6 1 0 20 0 0 20 4 8 30 4 8 60.44 76.99 15.74 0 3 4 Whitelist ESAD-UK 14 0.96 0 0 0 1 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 20 18079985 42404085 2 2 298 0 0 1 1 0 0.57 1 4 0 0 4 3 4 8 5 8 60.44 52.5 40.36 0 4 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 21 36202521 36256892 1 1 298 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA 5 4 5 60.44 70.19 7.16 0 3 4 Whitelist ESAD-UK 0.62 0.81 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 22 NA NA 0 0 298 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.81 NA NA NA 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-135 X NA NA 0 0 298 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.01 0 NA NA 0 No ESAD-UK OCCAMS-AH-135 ESAD 0.55 2.85 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578534_G_C,CN:2 2 ESAD-UK DO50348 OCCAMS-AH-135 male alive C15.5 no treatment 68 478 478 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-136 1 69515203 69600530 1 1 67 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 65.06 100 0 0 3 4 Whitelist ESAD-UK 0.62 0.2 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 2 0.01 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 2 205605200 238192162 1 2 67 1 1 0 0 0 0.57 1 4 0 0 4 3 4 7 5 5 65.06 99.89 0 0 3 1 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 4 0.03 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 3 60326197 127986411 2 4 67 2 0 1 1 0 0.57 0.14 6 0 0 6 4 4 11 5 6 65.06 95.27 4.69 0 2 3 Whitelist ESAD-UK 0.68 0.34 0 0 0.64 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 8 0.06 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 4 44119456 44219243 1 1 67 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 65.06 0.05 99.93 0 2 3 Whitelist ESAD-UK 0.62 0.33 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 2 0.01 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 5 57024950 176801252 1 2 67 1 0 1 0 0 0.57 0.44 2 NA 0 NA NA NA 4 4 4 65.06 5.66 91.67 0 2 3 Whitelist ESAD-UK 0.68 0.69 NA 0 0.64 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 4 0.03 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 6 45096268 148600879 6 6 67 1 0 2 3 0 0.34 0 14 0 0 14 5 5 26 5 7 65.06 34.33 62.84 0 4 6 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 Low confidence ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA With other complex events 12 0.09 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 7 NA NA 0 0 67 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.51 NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 8 33013163 55113864 2 2 67 1 0 0 1 0 0.57 0.16 5 0 0 5 0 3 15 4 7 65.06 74.03 22.55 0 4 1 Whitelist ESAD-UK 0.68 0.36 0 0 0.64 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 4 0.03 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 9 10418234 22230841 1 6 67 1 0 0 0 5 0.39 0.02 7 0 0 7 4 5 9 4 4 65.06 71.45 25.97 5 2 0 Whitelist ESAD-UK 6 0.62 0.07 0 0 0.59 1 Linked to low confidence ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA With other complex events 7 0.05 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 10 43897782 57564299 1 3 67 1 2 0 0 0 0.3 0.24 6 0 0 6 3 5 9 5 5 65.06 99.82 0 0 3 1 Whitelist ESAD-UK 0.62 0.47 0 0 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 6 0.04 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 11 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 12 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 13 53610691 65621971 1 3 67 0 1 1 1 0 0.8 0.5 1 0 0 NA NA NA NA NA NA 65.06 100 0 0 5 NA Whitelist ESAD-UK 0.87 0.75 0 0 0.84 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 6 0.04 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 14 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 15 45432490 66241650 1 1 67 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 3 3 65.06 79.58 20.3 0 2 3 Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 2 0.01 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 16 47562340 57689371 5 7 67 2 1 1 1 2 0.9 0 16 0 0 16 16 16 22 17 17 65.06 48.21 46.81 1 0 2 Whitelist ESAD-UK 0.96 0 0 0 0.92 1 High confidence ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA Canonical without polyploidization 12 0.09 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 17 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 18 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 19 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 20 15350452 15523344 1 1 67 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.06 99.03 0 0 1 4 Whitelist ESAD-UK 0.62 1 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 2 0.01 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 21 NA NA 0 0 67 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.42 NA NA NA 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 0 0 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 22 44821888 44981260 1 1 67 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 6 3 3 65.06 90.64 9.36 0 0 3 Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 2 0.01 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-136 X 7065488 103401560 1 4 67 3 0 0 0 1 0.03 0.39 1 0 0 NA NA NA NA NA NA 65.06 1.74 98.26 0 2 NA Whitelist ESAD-UK 0.54 0.64 0 0 0.33 1 No ESAD-UK OCCAMS-AH-136 ESAD 0.25 3.12 Eso-AdenoCA NA 7 0.05 NA 4 ESAD-UK DO50349 OCCAMS-AH-136 male alive C15.5 no treatment 72 611 611 Current smoker (includes daily smokers non-daily/occasional smokers) 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.1 ESAD-UK::OCCAMS-AH-139 1 2097392 245928341 1 5 113 3 0 1 1 0 0.28 0.6 11 0 0 11 5 5 11 5 5 33.95 11.93 85.1 0 2 1 Whitelist ESAD-UK 0.62 0.82 0 0 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 10 0.04 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 2 82666347 206314674 1 2 113 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 33.95 0 99.89 0 2 NA Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 3 60342678 60585053 2 2 113 2 0 0 0 0 0.11 0.02 3 0 0 NA NA NA 12 4 4 33.95 8.51 91.34 0 0 1 Whitelist ESAD-UK 0.54 0.06 0 0 0.48 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 4 NA NA 0 0 113 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.13 NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 5 25531479 176977159 1 6 113 4 1 1 0 0 0.11 0.7 11 0 0 11 5 8 11 5 8 33.95 58.6 38.74 0 2 1 Whitelist ESAD-UK 0.54 0.89 0 0 0.48 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 12 0.05 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 6 1854257 162933886 1 3 113 3 0 0 0 0 0.03 1 6 0 0 6 6 6 7 7 7 33.95 0.43 99.31 0 1 2 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 6 0.03 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 7 80875239 101495981 3 5 113 2 0 1 0 2 0.3 0 11 0 0 11 4 4 21 4 7 33.95 65.92 33.85 0 2 4 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 8 0.04 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 8 71231138 73965598 1 1 113 0 1 0 0 0 0.39 0.67 2 0 NA NA NA NA 8 4 8 33.95 77.53 19.05 0 2 4 Whitelist ESAD-UK 0.62 0.87 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 9 85145643 86091325 1 1 113 1 0 0 0 0 0.39 0.81 2 NA NA NA NA NA 4 4 4 33.95 99.84 0 0 1 3 Whitelist ESAD-UK 0.62 0.95 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 10 75869274 76006424 1 1 113 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 33.95 0 99.82 0 2 NA Whitelist ESAD-UK 0.62 0.2 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 11 NA NA 0 0 113 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.2 NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 12 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 13 62272408 62285050 1 1 113 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 7 4 6 33.95 85.83 0.01 0 2 3 Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 14 82261077 86314401 2 2 113 0 0 1 1 0 0.57 0.41 4 0 0 4 4 4 5 5 5 33.95 1.97 82.12 0 1 2 Whitelist ESAD-UK 0.68 0.66 0 0 0.64 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 15 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 16 18294200 26285674 2 3 113 0 1 0 1 1 0.57 0.01 8 0 0 8 0 4 19 6 11 33.95 22.01 73.46 0 3 2 Whitelist ESAD-UK 0.87 0.05 0 0 0.64 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 5 0.02 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 17 70444468 70497797 1 1 113 1 0 0 0 0 0.39 0.24 2 0 NA NA NA NA 6 5 6 33.95 64 31.55 0 2 3 Whitelist ESAD-UK 0.62 0.47 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 18 3705683 19158203 1 5 113 1 0 0 2 2 0.3 0.01 6 0 0 6 3 4 8 3 4 33.95 5.78 89.57 0 2 3 Whitelist ESAD-UK 0.62 0.05 0 0 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 8 0.04 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 19 NA NA 0 0 113 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 20 14589475 53798929 1 3 113 2 0 0 1 0 0.3 0.74 4 0 0 4 0 3 5 3 3 33.95 52.89 39.91 0 1 2 Whitelist ESAD-UK 0.62 0.91 0 0 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 6 0.03 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 21 36182887 36235017 1 1 113 1 0 0 0 0 0.39 0.05 1 0 NA NA NA NA NA NA NA 33.95 7.06 69.24 0 2 NA Whitelist ESAD-UK 0.62 0.17 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 22 22293355 41824722 3 3 113 2 1 0 0 0 0.3 0 11 0 0 11 3 4 14 3 4 33.95 29.54 46.68 0 2 1 Whitelist ESAD-UK 0.62 0.01 0 0 0.59 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 6 0.03 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-139 X NA NA 0 0 113 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.16 NA NA NA 0 No ESAD-UK OCCAMS-AH-139 ESAD 0.27 2.02 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 ESAD-UK DO50437 OCCAMS-AH-139 male alive C15.5 no treatment 58 567 567 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-AH-140 1 23013849 246386130 1 6 184 4 2 0 0 0 0.06 0.04 8 0 0 8 3 6 9 3 3 38.35 15.15 81.49 0 2 1 Whitelist ESAD-UK 0.54 0.14 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 12 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 2 9231716 236987811 1 15 184 6 6 1 1 1 0.07 0.5 22 0 0 22 3 9 23 3 9 38.35 6.26 91.05 0 2 4 Whitelist ESAD-UK 0.5 0.75 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 29 0.08 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 3 121793631 172195632 2 4 184 0 1 0 1 2 0.57 0.08 15 0 0 15 5 10 29 8 12 38.35 37.45 59.48 0 3 2 Whitelist ESAD-UK 0.68 0.23 0 0 0.64 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 4 2619830 140270641 1 7 184 4 2 0 1 0 0.17 0.66 5 0 0 5 3 5 7 4 7 38.35 94.78 2.84 0 1 2 Whitelist ESAD-UK 0.62 0.86 0 0 0.59 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 14 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 5 504568 59474680 1 8 184 6 0 0 0 2 0 0.76 5 0 0 5 3 5 8 5 8 38.35 18.84 78.48 0 2 1 Whitelist ESAD-UK 0.06 0.93 0 0 0.03 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 14 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 6 1838287 162919645 1 7 184 3 1 0 0 3 0.11 0.44 13 0.01 0 13 3 6 13 3 3 38.35 18.66 78.2 0 2 3 Whitelist ESAD-UK 0.62 0.69 0.01 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 7 17401768 127532134 1 5 184 3 1 1 0 0 0.28 0.14 5 0 0 5 5 5 5 5 5 38.35 52.99 46.79 0 2 1 Whitelist ESAD-UK 0.62 0.33 0 0 0.59 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 8 29119703 141921547 1 6 184 4 1 1 0 0 0.11 0.32 6 0 0 6 3 5 7 3 6 38.35 3.1 96.88 0 2 3 Whitelist ESAD-UK 0.54 0.57 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 12 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 9 12867150 98233153 1 3 184 1 2 0 0 0 0.3 0.57 8 0 0 8 3 5 10 4 5 38.35 42.96 54.47 0 3 1 Whitelist ESAD-UK 0.62 0.79 0 0 0.59 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 10 923838 125766003 1 10 184 3 4 2 1 0 0.57 0.21 19 0 0 19 4 5 19 4 5 38.35 42.26 54.16 1 2 3 Whitelist ESAD-UK 0.68 0.44 0 0 0.64 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 20 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 11 904630 102388762 1 11 184 3 4 0 0 4 0.06 0.12 17 0 0 17 5 16 17 5 5 38.35 26.21 73.36 0 2 3 Whitelist ESAD-UK 0.62 0.3 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 18 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 12 101828575 102240075 2 3 184 1 1 0 0 1 0.57 0.6 3 0 0 NA NA NA 13 3 6 38.35 15.62 80.06 0 3 1 Whitelist ESAD-UK 0.87 0.81 0 0 0.64 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 13 41261780 99176878 1 5 184 3 0 0 0 2 0.03 0.84 4 0 0 4 0 4 6 3 5 38.35 21.51 64.34 0 2 1 Whitelist ESAD-UK 0.45 0.98 0 0 0.33 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 14 37831817 92535832 1 5 184 3 0 0 0 2 0.03 0.83 7 0 0 7 6 7 11 8 8 38.35 5.28 79.73 0 1 2 Whitelist ESAD-UK 0.1 0.97 0 0 0.33 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 15 81021632 99281856 1 2 184 1 1 0 0 0 0.57 0.65 3 0 0 NA NA NA 7 3 4 38.35 48.78 35.68 0 4 3 Whitelist ESAD-UK 0.68 0.86 0 0 0.64 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 16 11889121 71917244 2 6 184 1 3 0 0 2 0.11 0 13 0 0 13 4 5 25 4 5 38.35 53.73 41.74 0 2 8 Whitelist ESAD-UK 11 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 17 70437170 70566933 2 2 184 2 0 0 0 0 0.11 0.02 3 0 0 NA NA NA 18 3 5 38.35 76.03 19.53 0 1 2 Whitelist ESAD-UK 0.54 0.08 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 18 281778 303443 1 1 184 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA 5 3 3 38.35 91.11 4.25 0 3 NA Whitelist ESAD-UK 0.62 0.27 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 19 28749845 37445996 1 4 184 2 1 0 0 1 0.3 0.1 6 0 0 6 3 3 9 3 3 38.35 92.45 0.28 0 1 2 Whitelist ESAD-UK 0.54 0.26 0 0 0.59 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 20 14731990 15327442 1 7 184 7 0 0 0 0 0 0.01 6 0 0 6 5 6 11 6 7 38.35 92.36 0.49 0 1 2 Whitelist ESAD-UK 0.02 0.03 0 0 0.01 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 14 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 21 27280526 36335751 1 4 184 3 0 1 0 0 0.11 0.01 3 0 0 NA NA NA 6 4 4 38.35 4.85 72.5 0 1 2 Whitelist ESAD-UK 0.54 0.04 0 0 0.48 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 22 NA NA 0 0 184 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.73 NA NA NA 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-140 X 7096829 153689911 1 4 184 1 2 0 1 0 0.57 0.18 1 0 0 NA NA NA NA NA NA 38.35 100 0 0 1 NA Whitelist ESAD-UK 0.68 0.39 0 0 0.64 0 No ESAD-UK OCCAMS-AH-140 ESAD 0.21 2.08 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578394_A_T;17_7578534_G_C,CN:2 2 ESAD-UK DO50350 OCCAMS-AH-140 male deceased C15.5 no treatment 51 324 324 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 10.66 ESAD-UK::OCCAMS-AH-143 1 32553405 33562389 3 3 596 0 1 1 1 0 0.8 0.45 4 0 0 4 0 3 54 7 20 51.69 96.87 0.16 0 4 3 Whitelist ESAD-UK 0.87 0.69 0 0 0.84 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 6 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 2 32444154 234479820 3 26 596 2 2 2 3 17 0.95 0.03 41 0 0 41 5 9 48 5 9 51.69 51.81 45.23 1 4 3 Whitelist ESAD-UK 7 0.92 0.12 0 0 0.97 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 35 0.03 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 3 32000485 193900528 4 7 596 0 2 1 1 3 0.57 0.17 28 0 0 28 6 11 31 6 11 51.69 27.15 69.41 0 2 3 Whitelist ESAD-UK 0.77 0.39 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 11 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 4 27188167 27293671 2 2 596 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 23 7 7 51.69 29.26 70.73 0 3 4 Whitelist ESAD-UK 0.68 0.03 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 4 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 5 15506346 40687265 5 5 596 2 1 1 1 0 0.9 0.01 14 0 0 14 5 6 44 7 7 51.69 34.38 65.47 0 2 5 Whitelist ESAD-UK 0.93 0.04 0 0 0.92 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 10 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 6 1856095 2237441 5 5 596 2 0 1 2 0 0.53 0 7 0 0 7 4 4 43 7 8 51.69 67.34 32.48 0 2 1 Whitelist ESAD-UK 0.68 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 10 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 7 26018260 146800456 1 19 596 5 4 1 2 7 0.34 0.72 15 0 0 15 8 12 19 10 14 51.69 62.55 34.91 2 2 3 Whitelist ESAD-UK 2 0.54 0.9 0 0 0.59 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 31 0.03 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 8 62507904 145112109 1 14 596 3 1 1 1 8 0.57 0.26 13 0 0 13 5 11 17 5 6 51.69 57.62 38.96 2 4 5 Whitelist ESAD-UK 0.9 0.51 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 20 0.02 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 9 9270942 115069668 1 15 596 10 3 0 0 2 0 0.53 23 0 0 23 8 13 31 8 9 51.69 46.97 52.89 7 2 3 Whitelist ESAD-UK 0.02 0.76 0 0 0.01 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 28 0.02 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 10 5265198 96689830 2 8 596 0 2 1 1 4 0.57 0.14 18 0 0 18 7 11 25 7 7 51.69 78.59 18.06 1 3 2 Whitelist ESAD-UK 0.68 0.34 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 12 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 11 66116520 69325041 2 3 596 0 2 0 0 1 0.11 1 6 0 0 6 5 6 19 6 6 51.69 18.23 77.63 0 3 4 Whitelist ESAD-UK 0.41 1 0 0 0.48 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 5 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 12 626222 114899988 1 20 596 5 5 3 3 4 0.8 0.17 36 0 0 36 7 14 37 7 7 51.69 54.61 45.37 7 2 3 Whitelist ESAD-UK 0.68 0.39 0 0 0.84 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 36 0.03 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 13 61869384 93573730 1 10 596 1 1 1 2 5 0.9 1 12 0 0 12 5 7 20 8 10 51.69 73.36 23.86 2 3 2 Whitelist ESAD-UK 9 0.68 1 0 0 0.92 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 15 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 14 22844978 23832931 4 4 596 2 2 0 0 0 0.26 0.91 4 0 0 4 0 3 13 3 3 51.69 22.1 77.84 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 8 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 15 69748215 70281208 6 6 596 1 3 1 1 0 0.57 0.1 9 0 0 9 3 5 18 4 5 51.69 46.93 48.29 0 3 6 Whitelist ESAD-UK 0.68 0.27 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 12 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 16 30527898 30743580 4 6 596 0 3 0 1 2 0.11 0.02 2 0 0 NA NA NA 17 14 14 51.69 12.62 86.39 0 2 4 Whitelist ESAD-UK 0.68 0.07 0 0 0.48 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 10 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 17 1276466 1333082 2 2 596 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 22 4 5 51.69 24.36 71.19 0 3 2 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 4 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 18 22659979 56256726 1 5 596 1 1 1 0 2 0.8 0.8 10 0 0 10 3 4 15 4 4 51.69 89.51 5.83 5 1 2 Whitelist ESAD-UK 0.68 0.95 0 0 0.84 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 8 0.01 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 19 34817358 36352020 2 3 596 0 1 1 0 1 0.57 0 5 0 0 5 3 5 33 4 6 51.69 34.96 57.76 6 4 5 Whitelist ESAD-UK 0.87 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 5 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 20 2962099 7275552 8 13 596 3 3 1 1 5 0.57 0 16 0 0 16 3 7 42 7 7 51.69 41.36 50.96 0 3 4 Whitelist ESAD-UK 5 0.8 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 21 0.02 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 21 20409572 27749195 1 3 596 2 0 0 0 1 0.11 0.71 5 0 0 5 4 5 9 5 7 51.69 11.08 66.28 0 2 3 Whitelist ESAD-UK 0.41 0.9 0 0 0.48 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 5 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 22 31410832 31706296 1 1 596 0 0 0 1 0 0.39 0.34 2 0 NA NA NA NA 6 3 5 51.69 93.08 6.92 0 2 4 Whitelist ESAD-UK 0.62 0.59 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-143 X 7425698 151486661 1 14 596 7 1 1 1 4 0.01 0.02 1 0 0 NA NA NA NA NA NA 51.69 100 0 1 1 NA Whitelist ESAD-UK 9 0.62 0.09 0 0 0.23 0 No ESAD-UK OCCAMS-AH-143 ESAD 0.46 2.6 Eso-AdenoCA NA 24 0.02 stopgain,17_7576855_A_G,CN:2 3 ESAD-UK DO50323 OCCAMS-AH-143 male alive C15.5 no treatment 67 643 643 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.15 ESAD-UK::OCCAMS-AH-146 1 1798665 247277610 1 5 195 1 2 1 0 1 0.57 0 12 0 0 12 4 5 14 4 4 80.45 97.03 0 0 4 7 Whitelist ESAD-UK 0.68 0.02 0 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 9 0.02 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 2 35929662 237027718 1 10 195 2 2 1 0 5 0.53 0.2 9 0 0 9 3 7 9 3 3 80.45 99.8 0.09 0 5 7 Whitelist ESAD-UK 0.86 0.42 0 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 15 0.04 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 3 60394691 60710045 1 3 195 3 0 0 0 0 0.03 0.4 4 0 0 4 0 3 6 0 3 80.45 99.92 0.05 0 0 1 Whitelist ESAD-UK 0.41 0.64 0 0 0.33 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 4 21026782 98969606 41 41 195 9 10 10 12 0 0.93 0 40 0 0 40 4 7 42 4 7 80.45 41.41 56.02 0 2 3 Whitelist ESAD-UK 0.96 0 0 0 0.95 0 Low confidence ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA With other complex events 82 0.21 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 5 58814373 143067649 1 9 195 3 0 0 0 6 0.03 0.77 5 0 0 5 3 4 8 3 3 80.45 79.1 18.23 0 5 0 Whitelist ESAD-UK 0.97 0.93 0 0 0.33 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 12 0.03 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 6 NA NA 0 0 195 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA 9 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.39 0 NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 7 61786698 110757423 1 2 195 2 0 0 0 0 0.11 0.04 1 0 0 NA NA NA NA NA NA 80.45 99.78 0 0 6 NA Whitelist ESAD-UK 0.54 0.13 0 0 0.48 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 8 NA NA 0 0 195 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.08 NA NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 9 32297974 91022927 3 3 195 1 0 1 1 0 0.8 0.85 5 0 0 5 3 3 11 3 4 80.45 82.5 0 0 7 4 Whitelist ESAD-UK 0.87 0.99 0 0 0.84 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 10 NA NA 0 0 195 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.3 0 NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 11 281152 2347660 3 3 195 2 1 0 0 0 0.3 0.39 2 0.03 0 NA NA NA 5 3 4 80.45 90.37 9.21 0 3 5 Whitelist ESAD-UK 0.62 0.64 0.03 0 0.59 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 12 74149776 74267037 1 1 195 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 9 3 3 80.45 96.17 0.09 0 2 3 Whitelist ESAD-UK 0.62 0.05 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 13 59887780 61062943 1 2 195 0 0 1 1 0 0.57 0.07 4 NA 0 4 3 4 5 3 3 80.45 83.07 0 0 5 4 Whitelist ESAD-UK 0.68 0.21 NA 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 14 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 15 39306345 87021117 2 3 195 0 1 1 0 1 0.57 0.03 16 0 0 16 5 6 20 5 9 80.45 84.43 0 0 6 7 Whitelist ESAD-UK 0.87 0.1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 5 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 16 78582123 78896989 1 2 195 2 0 0 0 0 0.11 0.65 4 0 0 4 4 4 10 5 5 80.45 37.85 56.97 0 0 2 Whitelist ESAD-UK 0.54 0.86 0 0 0.48 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 17 25626424 76366954 42 42 195 8 10 12 12 0 0.79 0 80 0 0 80 4 6 85 4 6 80.45 95.53 0 0 8 11 Whitelist ESAD-UK 0.87 0 0 0 0.84 0 Low confidence ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA With other complex events 84 0.22 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 18 49511456 60544001 1 2 195 1 1 0 0 0 0.57 0.5 3 NA 0 NA NA NA 4 3 3 80.45 95.2 0.06 0 4 2 Whitelist ESAD-UK 0.68 0.74 NA 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 19 8284769 38629237 1 7 195 0 1 0 1 5 0.57 0.11 9 0 0 9 4 6 12 4 4 80.45 92.72 0 0 6 8 Whitelist ESAD-UK 0.96 0.29 0 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 9 0.02 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 20 36083312 60574111 1 10 195 0 1 0 1 8 0.57 0 11 0 0 11 0 4 13 0 4 80.45 93.75 0 0 7 8 Whitelist ESAD-UK 16 0.96 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 12 0.03 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 21 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 22 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-146 X 70221972 104227132 1 2 195 0 0 0 1 1 0.39 1 2 0 NA NA NA NA 8 5 5 80.45 0.01 99.76 0 2 NA Whitelist ESAD-UK 0.68 1 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-146 ESAD 0.4 4.65 Eso-AdenoCA NA 3 0.01 stopgain,17_7578212_A_G,CN:6 4 ESAD-UK DO50438 OCCAMS-AH-146 female alive C15.5 no treatment 70 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-AH-160 1 38569712 38611724 1 1 102 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 71.57 100 0 0 3 4 Whitelist ESAD-UK 0.62 0.03 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 2 21598167 242894049 1 3 102 0 3 0 0 0 0.03 0.28 2 0 0 NA NA NA NA NA NA 71.57 99.87 0 0 2 3 Whitelist ESAD-UK 0.41 0.52 0 0 0.33 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 6 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 3 21878297 175600377 1 9 102 2 7 0 0 0 0 0.25 14 0 0 14 7 12 15 7 9 71.57 99.86 0 0 3 4 Whitelist ESAD-UK 0.12 0.48 0 0 0.08 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 18 0.09 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 4 12864441 144894158 1 3 102 0 3 0 0 0 0.03 0.16 2 0.02 0 NA NA NA NA NA NA 71.57 99.98 0 0 3 5 Whitelist ESAD-UK 0.41 0.37 0.02 0 0.33 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 6 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 5 58370118 165370487 1 3 102 1 1 0 0 1 0.57 0.84 5 0 0 5 3 5 10 3 4 71.57 87.46 9.88 0 2 0 Whitelist ESAD-UK 0.87 0.97 0 0 0.64 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 5 0.02 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 6 29798486 140411514 1 11 102 3 2 1 0 5 0.34 0 12 0 0 12 7 10 14 7 11 71.57 16.65 83.07 0 2 3 Whitelist ESAD-UK 0.68 0.03 0 0 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 17 0.08 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 7 49238347 145392348 1 4 102 0 4 0 0 0 0.01 1 7 0 0 7 7 7 7 7 7 71.57 99.78 0 0 3 4 Whitelist ESAD-UK 0.21 1 0 0 0.16 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 8 0.04 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 8 55241891 55410243 1 1 102 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 71.57 67.14 29.45 0 4 NA Whitelist ESAD-UK 0.62 0.4 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 9 21847820 130117335 1 4 102 2 1 0 0 1 0.3 0.6 8 0 0 8 3 5 9 3 3 71.57 43.79 55.51 0 2 0 Whitelist ESAD-UK 0.62 0.82 0 0 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 7 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 10 317291 123385436 1 5 102 2 2 1 0 0 0.53 0.15 7 0 0 7 7 7 7 7 7 71.57 27.85 68.53 4 2 3 Whitelist ESAD-UK 0.68 0.35 0 0 0.64 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 10 0.05 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 11 55871107 55886108 1 1 102 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 71.57 99.56 0.01 0 2 3 Whitelist ESAD-UK 0.62 0.26 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 12 24751521 29918484 3 3 102 2 0 0 1 0 0.3 0 10 0 0 10 3 3 21 3 3 71.57 96.09 0 0 4 7 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 6 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 13 99329767 105650204 1 1 102 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 71.57 100 0 0 3 4 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 14 79629719 79699918 1 1 102 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 71.57 0.07 99.02 0 2 3 Whitelist ESAD-UK 0.62 0.63 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 15 77010452 101408882 1 3 102 1 0 1 1 0 0.8 0.76 4 0 0 4 0 4 4 0 0 71.57 99.91 0 0 3 4 Whitelist ESAD-UK 0.87 0.93 0 0 0.84 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 6 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 16 78616002 78831204 2 2 102 2 0 0 0 0 0.11 0.06 4 0 0 4 3 4 11 4 4 71.57 0.61 99.29 0 1 0 Whitelist ESAD-UK 0.54 0.18 0 0 0.48 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 4 0.02 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 17 NA NA 0 0 102 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.92 NA NA NA 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 18 62557287 62588972 1 1 102 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 71.57 99.96 0 0 3 NA Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 19 1973520 2439119 2 2 102 0 1 0 1 0 0.57 0.02 4 0 0 4 4 4 9 4 5 71.57 18.5 81.32 0 3 4 Whitelist ESAD-UK 0.68 0.07 0 0 0.64 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 4 0.02 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 20 21676157 21777825 1 1 102 0 1 0 0 0 0.39 0.18 1 0 NA NA NA NA 6 0 0 71.57 92.91 0 0 3 NA Whitelist ESAD-UK 0.62 0.39 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 21 21904380 21949656 1 1 102 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 71.57 0 77.35 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 22 38161152 38202137 1 1 102 0 1 0 0 0 0.39 0.12 1 0 NA NA NA NA NA NA NA 71.57 0.01 99.99 0 2 NA Whitelist ESAD-UK 0.62 0.31 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 2 0.01 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-160 X 29729075 96840702 1 3 102 2 1 0 0 0 0.3 0.82 2 0 0 NA NA NA NA NA NA 71.57 99.98 0.02 0 1 2 Whitelist ESAD-UK 0.62 0.96 0 0 0.59 0 No ESAD-UK OCCAMS-AH-160 ESAD 0.69 2.68 Eso-AdenoCA NA 6 0.03 frameshift_deletion,17_7578179_-_CAGGCGGC,CN:2 3 ESAD-UK DO50440 OCCAMS-AH-160 male alive C15.5 no treatment 72 619 619 Current reformed smoker, duration not specified NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 20.36 ESAD-UK::OCCAMS-AH-167 1 1226912 246540325 1 18 307 7 6 0 1 4 0.01 0.6 18 0 0 18 5 8 19 5 8 35.49 5.07 94.91 0 2 4 Whitelist ESAD-UK 0.54 0.81 0 0 0.26 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 32 0.05 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 2 206339708 206605869 2 2 307 1 1 0 0 0 0.57 0.15 3 0 0 NA NA NA 32 5 13 35.49 97.11 0.29 0 4 6 Whitelist ESAD-UK 0.68 0.35 0 0 0.64 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 3 60607852 60738465 2 2 307 2 0 0 0 0 0.11 0.74 1 0 0 NA NA NA 10 3 4 35.49 0.45 99.51 0 2 NA Whitelist ESAD-UK 0.54 0.91 0 0 0.48 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 4 74360453 164003836 1 4 307 2 1 0 0 1 0.3 0 6 0 0 6 4 6 8 5 6 35.49 95.57 2.06 0 1 2 Whitelist ESAD-UK 0.62 0.01 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 5 46018066 164199281 1 6 307 5 1 0 0 0 0.01 0.01 7 0 0 7 5 5 7 5 5 35.49 28.59 71.27 0 2 1 Whitelist ESAD-UK 0.25 0.06 0 0 0.19 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 6 1663882 2287638 3 3 307 3 0 0 0 0 0.03 0.72 4 0 0 4 0 3 11 5 5 35.49 99.76 0.11 0 1 2 Whitelist ESAD-UK 0.41 0.9 0 0 0.33 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 7 14309901 157210244 1 19 307 10 1 0 0 8 0 0.37 11 0 0 11 3 4 12 3 3 35.49 51.77 48 6 2 4 Whitelist ESAD-UK 0.02 0.63 0 0 0 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 30 0.05 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 8 11643253 109254308 1 8 307 4 2 0 1 1 0.17 0.3 4 0 0 4 0 3 4 0 0 35.49 13.64 82.94 0 2 4 Whitelist ESAD-UK 0.62 0.54 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 9 4690152 4750396 1 1 307 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 5 3 5 35.49 0.28 99.02 0 1 2 Whitelist ESAD-UK 0.62 0.05 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 10 21384117 116141681 1 7 307 3 1 0 0 3 0.11 0.22 6 0 0 6 4 6 8 5 7 35.49 68.21 31.61 1 4 3 Whitelist ESAD-UK 0.62 0.45 0 0 0.48 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 11 91998857 128776846 3 6 307 2 0 0 1 3 0.3 1 8 0 0 8 3 5 13 3 5 35.49 45.33 50.9 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 12 2844891 127850886 1 5 307 1 4 0 0 0 0.04 0.04 11 0 0 11 7 10 13 8 8 35.49 34.35 65.57 1 2 3 Whitelist ESAD-UK 0.45 0.14 0 0 0.36 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 13 50577291 99002633 1 5 307 3 0 1 1 0 0.28 0.64 4 0 0 4 3 4 4 3 4 35.49 0.16 84.89 0 2 1 Whitelist ESAD-UK 0.62 0.85 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 14 45437410 105628899 1 3 307 1 2 0 0 0 0.3 0.32 3 0 0 NA NA NA NA NA NA 35.49 0.17 83.92 0 2 4 Whitelist ESAD-UK 0.62 0.57 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 15 26488895 88129045 1 5 307 2 0 0 0 3 0.11 0.49 9 0 0 9 4 6 9 4 6 35.49 48.8 35.79 3 3 2 Whitelist ESAD-UK 17 0.62 0.73 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA With other complex events 7 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 16 89408538 89507491 2 2 307 2 0 0 0 0 0.11 0.29 1 0 0 NA NA NA 9 6 7 35.49 0.54 89.74 0 1 NA Whitelist ESAD-UK 0.54 0.53 0 0 0.48 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 17 26331304 40471971 73 82 307 18 17 19 19 9 0.99 0 28 0 0 28 5 6 33 5 6 35.49 22.71 77.1 8 7 2 Whitelist ESAD-UK 1 0 0 0 0.99 0 Low confidence ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA With other complex events 155 0.25 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 18 36970679 37224697 2 2 307 2 0 0 0 0 0.11 0.72 3 0 0 NA NA NA 10 3 4 35.49 95.2 0.08 0 3 2 Whitelist ESAD-UK 0.54 0.9 0 0 0.48 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 19 1659211 45785252 1 7 307 4 2 1 0 0 0.17 0.21 5 0 0 5 0 3 5 0 3 35.49 15.47 75.31 0 2 3 Whitelist ESAD-UK 0.62 0.44 0 0 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 20 32653666 33585628 1 2 307 1 1 0 0 0 0.57 0.55 3 0 0 NA NA NA 5 3 5 35.49 0.52 98.51 0 2 5 Whitelist ESAD-UK 0.68 0.78 0 0 0.64 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 21 16814783 27492725 1 2 307 1 1 0 0 0 0.57 0.6 4 NA 0 4 3 4 6 3 3 35.49 2.79 74.56 0 2 0 Whitelist ESAD-UK 0.68 0.81 NA 0 0.64 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 22 NA NA 0 0 307 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.94 NA NA NA 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-167 X 6779047 106259063 1 3 307 2 1 0 0 0 0.3 0.01 1 0 0.03 NA NA NA NA NA NA 35.49 0 99.94 0 2 NA Whitelist ESAD-UK 0.62 0.04 0 0.03 0.59 0 No ESAD-UK OCCAMS-AH-167 ESAD 0.28 2.52 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577129_C_A,CN:2 2 ESAD-UK DO50315 OCCAMS-AH-167 female alive C15.5 no treatment 87 624 624 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 20.53 ESAD-UK::OCCAMS-AH-173 1 24204431 234619940 44 51 410 16 8 11 9 7 0.33 0 66 0 0 66 10 37 75 10 10 53.5 30.24 69.76 0 2 1 Whitelist ESAD-UK 11_14 0.68 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA With other complex events 95 0.12 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 2 206041393 216944570 2 2 410 1 1 0 0 0 0.57 0.21 5 0 0 5 5 5 36 8 8 53.5 15.52 84.39 0 2 1 Whitelist ESAD-UK 0.68 0.44 0 0 0.64 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 3 8692850 196904619 1 20 410 10 7 1 0 2 0 0.1 31 0 0 31 6 20 32 6 10 53.5 49.6 47.25 0 1 2 Whitelist ESAD-UK 0.07 0.26 0 0 0.07 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 38 0.05 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 4 1618263 177859827 1 13 410 0 9 0 0 4 0 0.01 12 0 0 12 12 12 13 13 13 53.5 98.72 1.26 0 1 2 Whitelist ESAD-UK 11_16 0.04 0.03 0 0 0 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 22 0.03 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 5 64608724 66415004 3 3 410 0 1 1 1 0 0.8 0.92 5 0 0 5 3 5 25 7 9 53.5 17.51 82.37 0 2 3 Whitelist ESAD-UK 0.87 1 0 0 0.84 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 6 10307273 168251590 1 12 410 3 7 1 0 1 0.02 0.21 15 0 0 15 7 7 17 8 8 53.5 78.6 21.26 0 2 1 Whitelist ESAD-UK 0.41 0.44 0 0 0.27 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 23 0.03 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 7 79681556 105076385 3 8 410 0 1 1 1 5 0.8 0.19 15 0 0 15 5 8 30 5 8 53.5 87 12.78 10 4 2 Whitelist ESAD-UK 0.87 0.41 0 0 0.84 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 11 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 8 14950710 146210675 5 14 410 2 2 0 1 9 0.53 1 18 0 0 18 9 9 19 10 10 53.5 35.55 60.92 0 2 1 Whitelist ESAD-UK 0.81 1 0 0 0.64 1 High confidence ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA With other complex events 19 0.02 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 9 75513430 75691135 2 2 410 0 2 0 0 0 0.11 0.61 4 0 0 4 3 4 25 9 9 53.5 70.13 29.7 0 2 1 Whitelist ESAD-UK 0.54 0.82 0 0 0.48 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 10 118996146 119290880 5 5 410 1 4 0 0 0 0.04 0 4 0 0 4 3 4 30 9 9 53.5 48.28 51.53 0 3 2 Whitelist ESAD-UK 0.45 0 0 0 0.36 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 10 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 11 17492995 133541101 1 20 410 6 10 0 0 4 0 0.16 28 0 0 28 9 13 33 9 13 53.5 40.93 58.65 0 2 1 Whitelist ESAD-UK 1_4 0.06 0.37 0 0 0.03 1 Linked to high confidence ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA With other complex events 36 0.04 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 12 105534670 105870962 2 2 410 0 0 1 1 0 0.57 0.41 2 0 0 NA NA NA 16 4 8 53.5 97.16 2.76 0 5 8 Whitelist ESAD-UK 0.68 0.66 0 0 0.64 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 13 26991542 96155452 1 6 410 0 6 0 0 0 0 0.06 8 0 0 8 8 8 10 9 9 53.5 23.58 76.42 0 2 3 Whitelist ESAD-UK 0.04 0.18 0 0 0.03 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 12 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 14 64173909 64406104 2 2 410 0 0 1 1 0 0.57 0.48 4 0 0 4 4 4 16 12 12 53.5 46.24 52.85 0 1 2 Whitelist ESAD-UK 0.68 0.73 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA Canonical without polyploidization 4 0 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 15 42191668 99335946 1 2 410 0 2 0 0 0 0.11 0.01 6 0 0 6 6 6 7 7 7 53.5 0.49 99.51 0 2 3 Whitelist ESAD-UK 0.54 0.03 0 0 0.48 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 16 2300666 78688405 1 8 410 2 3 1 0 2 0.34 1 15 0 0 15 7 15 17 7 7 53.5 66.31 33.6 1 2 1 Whitelist ESAD-UK 4 0.87 1 0 0 0.59 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 14 0.02 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 17 4985774 49213618 3 6 410 0 2 2 2 0 0.57 0.01 11 0 0 11 6 7 24 7 13 53.5 81.36 14.19 0 1 2 Whitelist ESAD-UK 0.68 0.06 0 0 0.64 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 12 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 18 12080038 30688121 11 13 410 2 0 5 4 2 0.15 0.02 16 0 0 16 3 6 23 7 7 53.5 74.57 19.83 0 2 1 Whitelist ESAD-UK 6 0.62 0.08 0 0 0.59 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 24 0.03 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 19 44961579 46389306 2 4 410 0 2 1 1 0 0.57 0.01 3 0 0 NA NA NA 15 7 9 53.5 53.05 39.53 0 2 3 Whitelist ESAD-UK 0.68 0.05 0 0 0.64 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 20 14745381 30704678 1 3 410 2 0 0 1 0 0.3 0.12 4 0 0 4 3 4 5 3 3 53.5 85.57 7.33 0 1 0 Whitelist ESAD-UK 0.62 0.31 0 0 0.59 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 21 43979460 43992861 3 3 410 1 0 1 1 0 0.8 0.65 3 0 0 NA NA NA 7 4 6 53.5 67.91 9.44 0 1 2 Whitelist ESAD-UK 0.87 0.86 0 0 0.84 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 22 17464056 43738114 1 5 410 1 2 0 1 1 0.57 0.35 14 0 0 14 5 5 15 6 6 53.5 73.04 15.85 0 1 2 Whitelist ESAD-UK 0.93 0.61 0 0 0.64 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 9 0.01 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-173 X 3218262 143979033 1 12 410 5 6 0 0 1 0.01 0.82 14 0 0 14 9 11 14 9 11 53.5 99.82 0.18 0 1 2 Whitelist ESAD-UK 0.21 0.96 0 0 0.2 1 No ESAD-UK OCCAMS-AH-173 ESAD 0.6 1.64 Eso-AdenoCA NA 23 0.03 frameshift_deletion,17_7579861_-_T,CN:1 1 ESAD-UK DO50354 OCCAMS-AH-173 male deceased C15.5 no treatment 61 547 547 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 17.99 ESAD-UK::OCCAMS-AH-174 1 3155456 224383077 1 21 572 13 2 0 1 5 0 0.03 28 0 0 28 6 8 30 6 8 88.76 99.62 0.37 0 4 3 Whitelist ESAD-UK 0.01 0.11 0 0 0 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 37 0.03 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 2 32595317 181665722 3 14 572 3 3 0 0 8 0.11 0.94 37 0 0 37 5 11 51 5 11 88.76 95.82 1.47 1 4 2 Whitelist ESAD-UK 0.68 1 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 20 0.02 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 3 30760520 175310916 2 7 572 2 2 1 1 1 0.88 0.01 21 0 0 21 6 11 29 6 11 88.76 86.66 10.28 0 2 3 Whitelist ESAD-UK 0.77 0.05 0 0 0.91 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 13 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 4 8673542 8882545 5 6 572 3 0 1 1 1 0.28 0.07 4 0 0 4 0 3 28 7 7 88.76 90.47 7.16 0 4 2 Whitelist ESAD-UK 0.68 0.2 0 0 0.59 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 11 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 5 56553706 87439638 3 3 572 1 2 0 0 0 0.3 0.14 10 0 0 10 4 8 28 13 13 88.76 77.25 20.08 0 2 3 Whitelist ESAD-UK 0.62 0.34 0 0 0.59 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 6 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 6 101966238 102154828 3 3 572 0 1 1 1 0 0.8 0.79 4 0 0 4 4 4 40 12 14 88.76 95.37 1.71 0 4 5 Whitelist ESAD-UK 0.87 0.94 0 0 0.84 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 6 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 7 50712649 55386047 50 99 572 16 11 12 11 49 0.71 0 28 0 0 28 4 5 49 7 15 88.76 99.48 0.28 16 49 106 Whitelist ESAD-UK 2_9 0.62 0 0 0 0.79 0 Low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 149 0.13 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 8 1230941 38668853 7 10 572 4 0 0 3 3 0.06 0 12 0 0 12 5 9 42 5 8 88.76 90.1 6.48 1 2 1 Whitelist ESAD-UK 0.62 0.02 0 0 0.48 0 Low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 17 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 9 73771445 82788410 2 6 572 2 2 0 0 2 0.26 0.83 5 0 0 5 5 5 27 6 13 88.76 96.27 1.22 0 5 4 Whitelist ESAD-UK 0.62 0.97 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA After polyploidization 10 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 10 67587530 68227570 3 3 572 2 1 0 0 0 0.3 0.11 7 0 0 7 3 5 16 5 6 88.76 97.35 2.42 0 5 2 Whitelist ESAD-UK 0.62 0.28 0 0 0.59 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 6 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 11 13681406 116931771 1 11 572 6 1 0 0 4 0 0.02 11 0 0 11 8 8 12 9 9 88.76 96.54 0 0 3 4 Whitelist ESAD-UK 6 0.41 0.07 0 0 0.09 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 18 0.02 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 12 19271132 109088102 1 11 572 6 1 0 0 4 0 0.01 16 0 0 16 9 9 19 9 12 88.76 95.34 0.91 0 4 2 Whitelist ESAD-UK 0.13 0.05 0 0 0.09 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 18 0.02 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 13 33722637 35237034 6 34 572 1 2 1 2 28 0.88 0 13 0 0 13 3 4 34 6 10 88.76 97.04 0.02 0 49 117 Whitelist ESAD-UK 0.62 0 0 0 0.91 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 40 0.03 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 14 50387418 52994571 12 12 572 2 1 4 5 0 0.34 0.09 11 0 0 11 0 4 32 5 7 88.76 94.39 1.9 0 5 7 Whitelist ESAD-UK 0.62 0.26 0 0 0.59 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 24 0.02 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 15 25331352 83271094 1 5 572 3 1 0 0 1 0.11 0 7 0 0 7 6 7 8 7 7 88.76 99.92 0 0 3 4 Whitelist ESAD-UK 0.62 0.02 0 0 0.48 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 9 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 16 78515302 78731304 3 3 572 3 0 0 0 0 0.03 0.9 3 0 0 NA NA NA 23 7 7 88.76 85.02 10.5 0 0 2 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 6 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 17 1185559 19439852 22 22 572 5 6 6 5 0 0.98 0 31 0 0 31 4 5 50 4 5 88.76 90.41 3.73 8 6 3 Whitelist ESAD-UK 0.99 0 0 0 0.99 0 Low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 44 0.04 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 18 20135751 48661483 1 7 572 4 1 0 0 2 0.04 0.19 17 0 0 17 3 5 20 3 5 88.76 37.82 57.53 0 2 7 Whitelist ESAD-UK 8 0.13 0.42 0 0 0.36 0 Linked to low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 12 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 19 7574628 58610006 1 10 572 8 1 0 0 1 0 0.37 16 0 0 16 6 10 19 6 10 88.76 91.79 0.42 0 4 5 Whitelist ESAD-UK 0.06 0.62 0 0 0.02 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 19 0.02 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 20 14895206 15212292 3 3 572 3 0 0 0 0 0.03 0.06 3 0 0 NA NA NA 13 4 6 88.76 98.78 0.24 0 2 3 Whitelist ESAD-UK 0.41 0.19 0 0 0.33 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 6 0.01 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 21 16251242 47972973 18 21 572 6 4 3 5 3 0.77 0 41 0 0 41 5 8 42 5 8 88.76 68.2 8.83 0 4 5 Whitelist ESAD-UK 0.76 0 0 0 0.84 0 Low confidence ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA With other complex events 39 0.03 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 22 17286919 17669729 1 1 572 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 4 3 4 88.76 77.58 11.31 0 3 4 Whitelist ESAD-UK 0.62 0.68 0 NA 0.59 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 2 0 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-174 X 6795587 150828692 1 28 572 8 1 0 3 16 0.01 0.5 1 0 0 NA NA NA NA NA NA 88.76 100 0 6 1 NA Whitelist ESAD-UK 9 0.87 0.75 0 0 0.16 0 No ESAD-UK OCCAMS-AH-174 ESAD 0.29 4.26 Eso-AdenoCA NA 40 0.03 stopgain,17_7578524_A_G,CN:6 2 ESAD-UK DO50441 OCCAMS-AH-174 male alive C15.5 no treatment 60 578 578 Current reformed smoker, duration not specified 50 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 19.01 ESAD-UK::OCCAMS-AH-182 1 41909912 244361254 7 9 223 2 1 3 1 2 0.67 0.71 28 0 0 28 6 6 39 6 6 69.25 54.67 42.35 0 5 7 Whitelist ESAD-UK 0.62 0.9 0 0 0.74 0 Low confidence ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA With other complex events 16 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 2 1500593 82229102 1 8 223 3 2 0 0 3 0.14 0.47 7 0 0 7 3 3 12 3 6 69.25 96.4 0.92 0 3 2 Whitelist ESAD-UK 0.62 0.71 0 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 3 2350210 179862528 1 16 223 3 6 0 1 6 0.04 0.9 26 0 0 26 5 9 29 5 6 69.25 75.78 20.93 1 5 4 Whitelist ESAD-UK 0.62 1 0 0 0.39 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 26 0.06 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 4 74456231 153507115 23 35 223 4 5 8 6 12 0.68 0 41 0 0 41 4 10 48 4 10 69.25 60.04 39.95 0 1 2 Whitelist ESAD-UK 0.92 0 0 0 0.75 0 Low confidence ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA With other complex events 58 0.13 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 5 NA NA 0 0 223 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 6 2008109 162885002 1 6 223 5 0 0 0 1 0 0.03 9 0 0 9 5 9 11 5 11 69.25 96.4 0.74 0 3 1 Whitelist ESAD-UK 0.04 0.12 0 0 0.07 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 7 6395795 145596477 1 9 223 5 2 1 0 1 0.07 0.66 21 0 0 21 5 7 21 5 7 69.25 94.08 3.37 0 4 5 Whitelist ESAD-UK 0.62 0.87 0 0 0.48 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 8 100807746 131632357 17 22 223 1 5 5 6 5 0.32 0 44 0 0 44 3 4 65 7 10 69.25 61.15 34.86 0 8 18 Whitelist ESAD-UK 0.54 0 0 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 39 0.09 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 9 9140305 136773882 1 5 223 3 2 0 0 0 0.14 0.3 10 0 0 10 4 4 12 4 5 69.25 99.18 0.12 0 3 4 Whitelist ESAD-UK 0.62 0.54 0 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 10 68833267 83527178 15 19 223 4 4 4 3 4 0.98 0 35 0 0 35 3 6 43 3 6 69.25 38.09 61.73 0 9 4 Whitelist ESAD-UK 3 1 0 0 0 0.99 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 34 0.08 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 11 70311018 115358798 1 11 223 1 0 0 2 8 0.3 0.05 15 0 0 15 3 5 20 3 6 69.25 32.83 66.74 0 3 5 Whitelist ESAD-UK 3 0.87 0.17 0 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 12 NA NA 0 0 223 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 13 NA NA 0 0 223 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.7 0 NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 14 48122800 86326186 1 3 223 2 0 0 0 1 0.11 0.17 3 NA 0 NA NA NA 4 3 3 69.25 84.09 0 0 4 5 Whitelist ESAD-UK 0.41 0.39 NA 0 0.48 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 15 NA NA 0 0 223 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.27 NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 16 6661045 78642748 1 5 223 4 0 0 0 1 0.01 0.84 16 0 0 16 4 5 17 4 6 69.25 77.37 18.11 0 1 2 Whitelist ESAD-UK 0.45 0.97 0 0 0.16 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 17 NA NA 0 0 223 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 18 14201714 69737931 1 5 223 1 1 1 0 2 0.8 0.1 12 0 0 12 3 4 16 3 3 69.25 74.99 20.22 0 1 5 Whitelist ESAD-UK 0.93 0.26 0 0 0.84 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 19 NA NA 0 0 223 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 20 14761788 15280817 5 5 223 5 0 0 0 0 0 0.16 5 0 0 5 3 5 5 3 3 69.25 98.95 0 0 1 5 Whitelist ESAD-UK 0.1 0.36 0 0 0.07 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 21 28430322 28774906 1 3 223 0 1 0 0 2 0.39 0.76 2 NA 0 NA NA NA 4 3 3 69.25 7.07 70.29 0 2 5 Whitelist ESAD-UK 0.87 0.92 NA 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 22 NA NA 0 0 223 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-182 X 45762637 46617375 8 8 223 1 2 4 1 0 0.39 0.16 2 0 0 NA NA NA 4 3 3 69.25 100 0 3 1 NA Whitelist ESAD-UK 0.62 0.37 0 0 0.59 0 No ESAD-UK OCCAMS-AH-182 ESAD 0.17 3.08 Eso-AdenoCA NA 16 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:3 3 ESAD-UK DO50355 OCCAMS-AH-182 male deceased C15.5 no treatment 60 478 478 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 15.72 ESAD-UK::OCCAMS-AH-196 1 25529468 248746966 1 5 216 2 2 0 0 1 0.26 0 8 0 0 8 5 8 9 5 5 28.2 5.45 94.34 0 2 1 Whitelist ESAD-UK 0.68 0.02 0 0 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 2 11777350 205520893 1 7 216 1 5 0 1 0 0.04 0.27 9 0 0 9 7 9 9 7 7 28.2 0.15 99.75 0 2 3 Whitelist ESAD-UK 0.47 0.51 0 0 0.38 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 3 16403546 87215454 1 9 216 4 4 0 0 1 0.05 0.69 14 0 0 14 3 8 17 3 4 28.2 50.2 46.63 0 4 5 Whitelist ESAD-UK 0.62 0.89 0 0 0.46 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 4 62049747 161061400 1 6 216 2 3 1 0 0 0.34 0.04 6 0 0 6 5 6 9 5 5 28.2 16.72 83.25 0 2 3 Whitelist ESAD-UK 0.62 0.14 0 0 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 5 120426403 120536180 1 1 216 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 28.2 44 53.28 0 2 3 Whitelist ESAD-UK 0.62 0.01 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 6 55271559 150022033 1 6 216 0 3 0 0 3 0.03 0.32 9 0 0 9 6 6 10 6 6 28.2 47.94 51.92 0 3 2 Whitelist ESAD-UK 0.04 0.57 0 0 0.33 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 7 NA NA 0 0 216 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.01 NA NA NA 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 8 5446683 138860780 1 9 216 2 7 0 0 0 0 0.64 12 0 0 12 5 12 13 5 5 28.2 99.85 0.15 0 3 4 Whitelist ESAD-UK 0.12 0.85 0 0 0.08 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 9 30327889 30556254 2 2 216 0 0 1 1 0 0.57 0.48 4 0 0 4 4 4 9 5 5 28.2 1.47 97.82 0 2 3 Whitelist ESAD-UK 0.68 0.73 0 0 0.64 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 10 42614012 120536495 1 8 216 1 2 2 2 1 0.93 0.74 14 0 0 14 9 9 15 10 10 28.2 33.67 62.76 0 3 2 Whitelist ESAD-UK 0.87 0.91 0 0 0.95 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 11 55214138 90203425 1 2 216 0 2 0 0 0 0.11 0.02 3 NA 0 NA NA NA 4 4 4 28.2 13.03 86.54 0 2 3 Whitelist ESAD-UK 0.54 0.06 NA 0 0.48 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 12 42251360 51998596 1 2 216 0 2 0 0 0 0.11 0.02 4 0 0 4 4 4 5 5 5 28.2 0.12 99.8 0 2 3 Whitelist ESAD-UK 0.54 0.06 0 0 0.48 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 13 57029635 57194728 1 1 216 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 28.2 0 85.85 0 2 NA Whitelist ESAD-UK 0.62 0.04 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 14 21640761 87889663 1 3 216 0 3 0 0 0 0.03 0.43 6 0 0 6 4 6 8 4 4 28.2 4.34 79.75 0 3 2 Whitelist ESAD-UK 0.41 0.68 0 0 0.33 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 15 46589523 47379096 1 1 216 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 28.2 0.77 83.48 0 2 3 Whitelist ESAD-UK 0.62 0.34 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 16 69630133 79560391 1 3 216 2 1 0 0 0 0.3 0.67 6 0 0 6 4 6 7 5 5 28.2 1.71 98.19 0 2 1 Whitelist ESAD-UK 0.62 0.87 0 0 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 17 2989600 56538274 1 2 216 1 1 0 0 0 0.57 0.3 1 0.24 0.04 NA NA NA NA NA NA 28.2 0 99.98 0 2 NA Whitelist ESAD-UK 0.68 0.54 0.24 0.04 0.64 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 18 13655503 77718608 82 90 216 18 25 19 20 8 0.7 0 92 0 0 92 8 9 98 10 10 28.2 41.89 52.58 3 4 7 Whitelist ESAD-UK 0.86 0 0 0 0.78 1 High confidence ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA With other complex events 172 0.4 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 19 21189745 41169782 1 4 216 1 0 2 0 1 0.3 0.04 11 0 0 11 3 6 12 3 4 28.2 34.17 65.37 0 1 2 Whitelist ESAD-UK 0.68 0.14 0 0 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 20 NA NA 0 0 216 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.26 NA NA NA 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 21 18238285 46647638 1 14 216 1 2 0 0 11 0.3 0 15 0 0 15 4 5 17 5 6 28.2 77.34 0.01 2 3 1 Whitelist ESAD-UK 0.68 0 0 0 0.59 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 22 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-196 X 90751196 129320995 1 2 216 0 1 0 1 0 0.57 0.08 3 0 0 NA NA NA NA NA NA 28.2 99.99 0.01 0 1 2 Whitelist ESAD-UK 0.68 0.24 0 0 0.64 1 No ESAD-UK OCCAMS-AH-196 ESAD 0.68 2.13 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 ESAD-UK DO50442 OCCAMS-AH-196 male deceased C15.5 no treatment 81 467 467 Current smoker (includes daily smokers non-daily/occasional smokers) 35 no None Included Eso-AdenoCA ESAD UK 1 15.36 ESAD-UK::OCCAMS-AH-197 1 12763310 29548147 3 7 269 1 0 1 1 4 0.8 0.02 8 0 0 8 3 7 34 4 8 59.2 96.91 3.09 0 2 3 Whitelist ESAD-UK 10 0.62 0.09 0 0 0.84 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 2 78481300 78695342 2 2 269 2 0 0 0 0 0.11 0.01 2 0 0 NA NA NA 13 3 3 59.2 97.12 0.19 0 3 4 Whitelist ESAD-UK 0.54 0.04 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 3 8617807 142361096 1 9 269 3 4 0 0 2 0.06 0.07 13 0 0 13 5 8 16 5 7 59.2 99.85 0 0 3 4 Whitelist ESAD-UK 0.41 0.21 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 4 62227844 108902311 1 5 269 5 0 0 0 0 0 0.05 6 0 0 6 6 6 9 7 7 59.2 0.19 99.8 0 1 2 Whitelist ESAD-UK 0.1 0.16 0 0 0.07 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 5 59058183 170918575 2 4 269 0 0 2 2 0 0.26 0.26 15 0 0 15 11 15 22 11 11 59.2 26.44 70.9 0 2 3 Whitelist ESAD-UK 0.62 0.5 0 0 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 6 30525689 163145790 1 2 269 2 0 0 0 0 0.11 0.01 6 0 0 6 3 5 7 3 5 59.2 97.08 0 0 3 4 Whitelist ESAD-UK 0.54 0.03 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 7 3988436 99759229 1 12 269 3 3 0 0 6 0.11 0.89 14 0 0 14 5 5 15 5 5 59.2 39.11 60.67 0 8 7 Whitelist ESAD-UK 19_4 0.68 1 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 8 49509077 124923293 1 3 269 2 1 0 0 0 0.3 0.58 5 0 0 5 3 3 9 3 3 59.2 96.48 0 0 5 3 Whitelist ESAD-UK 0.62 0.8 0 0 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 9 4395303 130599471 1 8 269 5 1 0 0 2 0.01 0.53 13 0 0 13 5 8 14 5 5 59.2 82.43 16.87 0 2 3 Whitelist ESAD-UK 0.21 0.76 0 0 0.19 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 10 53023787 111190762 1 9 269 3 1 0 0 5 0.11 0.3 11 0 0 11 6 9 16 6 9 59.2 39.25 57.47 0 2 0 Whitelist ESAD-UK 0.68 0.55 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 11 60717275 95643409 16 17 269 1 4 6 5 1 0.32 0 31 0 0 31 9 24 39 9 11 59.2 58.7 37.7 0 3 4 Whitelist ESAD-UK 0.68 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA With other complex events 33 0.06 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 12 53626633 123151239 6 6 269 1 2 2 1 0 0.88 0.66 8 0 0 8 6 8 13 7 11 59.2 99.92 0 0 3 5 Whitelist ESAD-UK 0.93 0.87 0 0 0.91 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 13 32747516 69047926 1 3 269 3 0 0 0 0 0.03 0.4 2 0 0 NA NA NA 4 0 3 59.2 57.06 40.16 0 2 3 Whitelist ESAD-UK 0.41 0.65 0 0 0.33 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 14 28831469 49759278 4 4 269 1 1 1 1 0 1 0.08 8 0 0 8 4 5 24 4 5 59.2 36.88 47.21 0 4 5 Whitelist ESAD-UK 1 0.22 0 0 1 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 15 35589823 68562956 1 5 269 0 3 0 0 2 0.03 0.71 4 0 0 4 4 4 7 5 5 59.2 0.23 99.66 0 2 4 Whitelist ESAD-UK 0.62 0.9 0 0 0.33 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 16 66897294 79107148 1 4 269 2 2 0 0 0 0.26 0.34 8 0 0 8 4 6 9 5 7 59.2 0.69 98.96 0 2 4 Whitelist ESAD-UK 0.62 0.59 0 0 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 17 39954553 41016062 3 3 269 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 25 5 5 59.2 72.05 23.49 0 4 6 Whitelist ESAD-UK 0.87 0 0 0 0.84 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 18 3666653 20878841 5 7 269 1 1 2 1 2 0.9 0 14 0 0 14 0 3 25 6 6 59.2 26.87 67.25 4 14 13 Whitelist ESAD-UK 0.96 0 0 0 0.92 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 19 32797288 39906121 4 4 269 0 2 1 1 0 0.57 0 14 0 0 14 5 8 31 5 5 59.2 84.96 14.58 0 6 7 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 20 14883037 15198683 2 2 269 2 0 0 0 0 0.11 0 4 0 0 4 3 4 18 6 6 59.2 98.28 0.86 0 2 0 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 21 37613882 37632738 1 1 269 1 0 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 59.2 0 77.35 0 2 NA Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 22 50327890 50421458 1 1 269 0 1 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 59.2 0 98.28 0 2 NA Whitelist ESAD-UK 0.62 0.63 NA NA 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-197 X 7293698 8593275 1 3 269 2 1 0 0 0 0.3 0.04 7 0.05 0 7 3 6 11 3 6 59.2 53.82 42.61 0 0 2 Whitelist ESAD-UK 0.62 0.13 0.05 0 0.59 1 No ESAD-UK OCCAMS-AH-197 ESAD 0.3 3.09 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578268_C_A,CN:2 3 ESAD-UK DO50443 OCCAMS-AH-197 female alive C15.5 no treatment 79 401 401 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-AH-213 1 6655306 23886285 2 4 283 2 0 1 1 0 0.57 0.91 8 0 0 8 6 8 17 6 6 54.47 1.13 98.87 0 1 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 2 209256707 232908025 3 3 283 1 1 0 1 0 0.8 0.59 4 0 0 4 3 4 25 12 14 54.47 48.7 51.19 0 4 2 Whitelist ESAD-UK 0.87 0.81 0 0 0.84 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 3 13968605 194565147 6 8 283 1 1 2 2 2 0.88 0.42 28 0 0 28 13 17 29 13 17 54.47 98.29 1.57 0 3 2 Whitelist ESAD-UK 7 1 0.67 0 0 0.91 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 False positive; manually removed ESAD-UK::OCCAMS-AH-213 4 19575521 184603132 1 12 283 5 2 0 0 5 0.02 0.91 8 0 0 8 8 8 10 10 10 54.47 65.17 34.81 1 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.33 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 5 60138700 179198669 1 6 283 6 0 0 0 0 0 0.03 3 0 0 NA NA NA 4 3 3 54.47 25.88 71.46 0 2 1 Whitelist ESAD-UK 0.04 0.1 0 0 0.03 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 6 2015761 73551837 1 6 283 3 0 0 0 3 0.03 0.26 7 0 0 7 4 4 8 5 5 54.47 62.95 34.21 0 1 2 Whitelist ESAD-UK 0.25 0.5 0 0 0.33 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 7 48065329 141802391 1 12 283 4 0 1 0 7 0.04 0.29 15 0 0 15 7 7 16 8 9 54.47 68.34 31.43 2 4 2 Whitelist ESAD-UK 3 0.54 0.54 0 0 0.36 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 8 2853805 22205777 16 21 283 4 3 5 4 5 0.92 0 39 0 0 39 3 5 47 6 11 54.47 66.12 29.89 0 8 4 Whitelist ESAD-UK 4_7 0.95 0 0 0 0.94 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 37 0.07 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 9 21863044 25487961 1 10 283 2 1 0 0 7 0.3 0.09 8 0 0 8 3 3 13 3 4 54.47 39.44 58.02 0 2 1 Whitelist ESAD-UK 0.68 0.25 0 0 0.59 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 10 5685109 9724393 5 7 283 1 2 2 0 2 0.53 0 8 0 0 8 3 4 39 7 7 54.47 93.83 5.96 0 8 2 Whitelist ESAD-UK 11 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 11 70342971 123316059 1 3 283 3 0 0 0 0 0.03 0.32 5 0 0 5 5 5 5 5 5 54.47 99.1 0.34 0 3 2 Whitelist ESAD-UK 0.41 0.57 0 0 0.33 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 12 18239948 18295372 2 2 283 0 0 1 1 0 0.57 0.67 2 0 0 NA NA NA 13 7 7 54.47 54.37 45.55 0 1 2 Whitelist ESAD-UK 0.68 0.87 0 0 0.64 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 13 90466534 107800693 4 4 283 2 0 0 2 0 0.26 0.14 4 0 0 4 4 4 6 6 6 54.47 81.36 4.49 0 2 3 Whitelist ESAD-UK 0.62 0.34 0 0 0.59 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 14 85386362 103939962 1 2 283 2 0 0 0 0 0.11 0.12 2 0 0 NA NA NA NA NA NA 54.47 84.57 0.04 0 2 3 Whitelist ESAD-UK 0.54 0.31 0 0 0.48 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 15 57759873 59059264 1 3 283 1 1 0 0 1 0.57 0.71 5 0 0 5 3 5 7 4 4 54.47 43.5 40.99 0 3 1 Whitelist ESAD-UK 0.87 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 16 63118394 84714443 1 4 283 3 1 0 0 0 0.11 0.58 6 0 0 6 3 6 8 3 3 54.47 38.59 56.25 0 2 1 Whitelist ESAD-UK 0.54 0.8 0 0 0.48 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 17 38973868 39825336 2 2 283 2 0 0 0 0 0.11 0.14 1 0 0 NA NA NA 6 6 6 54.47 66.19 28.36 0 3 NA Whitelist ESAD-UK 0.54 0.33 0 0 0.48 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 18 18619503 20857704 1 2 283 1 0 0 1 0 0.57 0.46 4 0 0 4 0 3 5 0 3 54.47 75.67 19.69 0 2 4 Whitelist ESAD-UK 0.68 0.7 0 0 0.64 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 19 NA NA 0 0 283 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 0 NA NA 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 20 14681381 15150186 5 5 283 4 1 0 0 0 0.04 0.01 6 0 0 6 4 6 11 6 6 54.47 98.26 0.77 0 2 3 Whitelist ESAD-UK 0.45 0.05 0 0 0.36 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 21 NA NA 0 0 283 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 22 NA NA 0 0 283 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-AH-213 X 72415521 86921694 4 6 283 3 1 0 0 2 0.11 0 7 0 0 7 4 4 19 7 7 54.47 5.82 94.18 0 2 1 Whitelist ESAD-UK 6 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-AH-213 ESAD 0.57 2.68 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 4 ESAD-UK DO50444 OCCAMS-AH-213 male alive C15.5 no treatment 77 399 399 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-ED-003 1 153523933 199269229 1 4 117 2 2 0 0 0 0.26 0.86 3 0 0 NA NA NA 8 5 6 59.58 59.18 37.77 0 4 2 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 8 0.03 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 2 133751219 133795927 1 1 117 1 0 0 0 0 0.39 0.13 2 0 NA NA NA NA 6 3 4 59.58 96.86 0.45 0 0 4 Whitelist ESAD-UK 0.62 0.32 0 NA 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 3 77926901 140720659 4 12 117 1 2 2 3 4 0.8 0 19 0 0 19 9 15 31 9 17 59.58 42.67 57.2 0 2 3 Whitelist ESAD-UK 0.93 0 0 0 0.84 1 High confidence ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA With other complex events 20 0.09 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 4 89736504 136630250 1 4 117 2 2 0 0 0 0.26 1 2 0 0 NA NA NA NA NA NA 59.58 12.98 86.91 0 1 2 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 8 0.03 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 5 58243342 165831567 1 2 117 0 2 0 0 0 0.11 0.12 2 0.14 0 NA NA NA 4 4 4 59.58 97.33 0 0 3 4 Whitelist ESAD-UK 0.54 0.31 0.14 0 0.48 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 6 21717695 140433369 1 4 117 1 1 0 0 2 0.57 0.33 8 0 0 8 4 6 9 4 6 59.58 14.15 83.01 0 2 4 Whitelist ESAD-UK 0.62 0.58 0 0 0.64 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 6 0.03 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 7 54835063 58040616 16 16 117 4 2 5 5 0 0.68 0 23 0 0 23 3 7 41 5 5 59.58 82.71 14.73 1 5 4 Whitelist ESAD-UK 0.79 0 0 0 0.76 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 32 0.14 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 8 78994308 79014829 1 1 117 0 1 0 0 0 0.39 0.67 2 0 NA NA NA NA 7 4 4 59.58 71.88 28.11 0 5 7 Whitelist ESAD-UK 0.62 0.87 0 NA 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 9 26903984 123739049 1 2 117 0 2 0 0 0 0.11 0.23 6 0 0 6 3 6 11 3 5 59.58 96.52 0.4 0 4 5 Whitelist ESAD-UK 0.54 0.46 0 0 0.48 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 10 56908363 63900814 1 2 117 1 1 0 0 0 0.57 0.5 4 0 0 4 3 4 6 3 3 59.58 99.82 0 1 4 3 Whitelist ESAD-UK 0.68 0.75 0 0 0.64 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 11 23302654 23349177 1 3 117 1 0 1 1 0 0.8 0.38 2 0 0 NA NA NA NA NA NA 59.58 99.57 0 0 1 3 Whitelist ESAD-UK 0.87 0.63 0 0 0.84 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 6 0.03 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 12 NA NA 0 0 117 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 13 64214672 71081264 1 2 117 1 1 0 0 0 0.57 0.8 1 NA 0 NA NA NA 4 0 0 59.58 100 0 1 5 NA Whitelist ESAD-UK 0.68 0.95 NA 0 0.64 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 14 NA NA 0 0 117 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 15 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 16 78898798 79219020 2 2 117 1 0 1 0 0 0.57 0 4 0 0 4 4 4 24 10 11 59.58 41.01 53.82 0 1 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 17 NA NA 0 0 117 0 0 0 0 0 NA 0.14 NA 0.42 NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 0.42 NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 18 NA NA 0 0 117 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 19 NA NA 0 0 117 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 20 14711339 15166753 1 1 117 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 59.58 98.3 0.72 0 2 4 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 21 NA NA 0 0 117 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 22 46295293 46339841 1 1 117 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 59.58 0.09 99.91 0 1 2 Whitelist ESAD-UK 0.62 1 NA NA 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-003 X 7444446 7486221 1 1 117 1 0 0 0 0 0.39 0.53 1 0 NA NA NA NA 4 3 3 59.58 25.71 74.29 0 1 NA Whitelist ESAD-UK 0.62 0.76 0 NA 0.59 1 No ESAD-UK OCCAMS-ED-003 ESAD 0.44 2.99 Eso-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:5 3 ESAD-UK DO50357 OCCAMS-ED-003 male alive C15.5 no treatment 59 1150 1150 Current reformed smoker, duration not specified 35 no None Included Eso-AdenoCA ESAD UK 1 37.83 ESAD-UK::OCCAMS-ED-007 1 87550902 96059564 3 3 163 1 0 1 1 0 0.8 0.06 1 0 0 NA NA NA 6 3 3 93.49 100 0 0 4 NA Whitelist ESAD-UK 0.87 0.18 0 0 0.84 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 2 7327590 169951932 1 6 163 4 1 0 0 1 0.04 0.06 5 0 0 5 3 5 5 3 3 93.49 99.9 0 1 4 3 Whitelist ESAD-UK 0.54 0.2 0 0 0.36 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 3 60292916 85491534 1 4 163 2 1 1 0 0 0.57 0.12 4 0 0 4 3 4 5 3 3 93.49 99.95 0 0 3 0 Whitelist ESAD-UK 0.68 0.31 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 4 41268533 135754712 1 6 163 3 0 0 1 2 0.11 0.43 4 0 0 4 3 4 7 3 7 93.49 99.7 0.07 0 3 1 Whitelist ESAD-UK 0.68 0.68 0 0 0.48 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 5 NA NA 0 0 163 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.06 NA NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 6 137614668 144874378 24 26 163 8 7 5 4 2 0.64 0 16 0 0 16 4 6 22 4 4 93.49 99.85 0 0 6 4 Whitelist ESAD-UK 0.82 0 0 0 0.72 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 50 0.15 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 7 92716042 142383792 18 19 163 3 6 6 3 1 0.57 0 39 0 0 39 3 6 43 5 6 93.49 97.45 0 0 5 6 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 37 0.11 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 8 90441014 134126970 1 5 163 4 1 0 0 0 0.04 0.29 8 0 0 8 3 5 11 3 4 93.49 96.58 0 0 9 8 Whitelist ESAD-UK 0.45 0.53 0 0 0.36 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 9 115382729 124157895 4 4 163 2 2 0 0 0 0.26 0.69 9 0 0 9 3 5 12 3 6 93.49 62.54 36.76 0 4 2 Whitelist ESAD-UK 0.62 0.89 0 0 0.59 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 10 64975581 124807514 1 5 163 1 0 1 0 3 0.57 1 8 0 0 8 3 6 12 6 6 93.49 96.65 0 1 3 4 Whitelist ESAD-UK 0.93 1 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 11 65408835 131490994 1 5 163 1 0 1 0 3 0.57 0.71 2 0 0 NA NA NA NA NA NA 93.49 99.44 0 0 4 5 Whitelist ESAD-UK 0.93 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 12 24609288 26115599 2 4 163 0 2 1 1 0 0.57 1 5 0 0 5 0 3 6 0 3 93.49 99.98 0 0 5 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 13 41615428 44707290 3 3 163 1 0 1 1 0 0.8 0.03 9 0 0 9 3 5 14 3 5 93.49 100 0 0 25 28 Whitelist ESAD-UK 0.87 0.11 0 0 0.84 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 14 NA NA 0 0 163 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.2 NA NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 15 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 16 78629531 78642514 1 1 163 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 93.49 99.89 0.01 0 2 4 Whitelist ESAD-UK 0.62 0.33 NA NA 0.59 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 17 NA NA 0 0 163 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 12 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.03 0 NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 18 10507963 27115467 1 3 163 2 1 0 0 0 0.3 0.09 6 0 0 6 3 6 8 3 3 93.49 95.35 0 0 4 3 Whitelist ESAD-UK 0.62 0.24 0 0 0.59 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 19 1305564 1345585 1 1 163 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 93.49 92.72 0 0 3 NA Whitelist ESAD-UK 0.62 0.63 NA NA 0.59 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 20 14709267 46577925 2 7 163 2 0 1 1 3 0.57 0 3 0 0 NA NA NA 9 3 3 93.49 99.02 0 0 4 5 Whitelist ESAD-UK 0.96 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 21 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 22 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-007 X 7429383 107214668 1 4 163 4 0 0 0 0 0.01 0.15 1 0 0 NA NA NA NA NA NA 93.49 100 0 2 1 NA Whitelist ESAD-UK 0.21 0.35 0 0 0.16 0 No ESAD-UK OCCAMS-ED-007 ESAD 0.49 4.07 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:5 4 ESAD-UK DO50306 OCCAMS-ED-007 male deceased C15.5 no treatment 78 333 333 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.95 ESAD-UK::OCCAMS-ED-041 1 236876816 246528624 1 2 125 1 0 1 0 0 0.57 0.25 5 0.01 0 5 5 5 8 5 5 43.94 7.92 92.08 0 2 1 Whitelist ESAD-UK 0.68 0.49 0.01 0 0.64 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 2 144209346 167223868 11 11 125 2 3 3 3 0 0.97 0 18 0 0 18 18 18 31 29 29 43.94 9.43 90.47 1 1 2 Whitelist ESAD-UK 0.98 0 0 0 0.98 1 High confidence ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA Canonical without polyploidization 22 0.09 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 3 60189844 60583711 3 3 125 3 0 0 0 0 0.03 0.29 4 0 0 4 3 4 13 10 10 43.94 2.66 97.31 0 1 0 Whitelist ESAD-UK 0.41 0.53 0 0 0.33 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 4 114574642 128898498 2 3 125 0 1 0 1 1 0.57 0.11 1 0 0 NA NA NA 6 3 3 43.94 67.54 32.44 0 1 NA Whitelist ESAD-UK 0.87 0.28 0 0 0.64 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 5 20133020 86674626 1 4 125 1 1 0 0 2 0.57 0.2 5 0 0 5 3 4 6 3 4 43.94 99.78 0.1 0 1 2 Whitelist ESAD-UK 0.54 0.42 0 0 0.64 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 6 1734056 117360768 1 4 125 1 1 1 0 1 0.8 0.26 8 0.14 0 8 6 8 9 7 7 43.94 1.59 98.27 1 2 3 Whitelist ESAD-UK 0.68 0.5 0.14 0 0.84 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 7 3569403 157684810 1 15 125 6 1 0 0 8 0 0 17 0 0 17 11 16 18 11 16 43.94 33.52 66.25 1 3 2 Whitelist ESAD-UK 2_9 0.54 0 0 0 0.09 1 Linked to high confidence ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA Canonical without polyploidization 22 0.09 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 8 67558003 68790229 1 1 125 1 0 0 0 0 0.39 0.69 2 0 NA NA NA NA 6 5 6 43.94 99.03 0.84 0 2 3 Whitelist ESAD-UK 0.62 0.89 0 NA 0.59 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 9 30927708 82504861 1 9 125 1 1 0 0 7 0.57 0 10 0 0 10 7 10 16 10 10 43.94 52.06 47.24 0 1 2 Whitelist ESAD-UK 2 0.68 0 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA Canonical without polyploidization 11 0.04 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 10 7363058 89989113 1 4 125 4 0 0 0 0 0.01 1 5 0 0 5 4 5 8 5 8 43.94 87.26 9.39 0 2 3 Whitelist ESAD-UK 0.21 1 0 0 0.16 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 11 37018263 37083588 1 1 125 0 1 0 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 43.94 0.05 99.53 0 2 3 Whitelist ESAD-UK 0.62 0.87 NA NA 0.59 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 12 NA NA 0 0 125 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.54 NA NA NA 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 13 57632491 79789631 1 3 125 1 1 0 0 1 0.57 0.62 3 0 0 NA NA NA 4 0 0 43.94 100 0 0 3 6 Whitelist ESAD-UK 0.62 0.84 0 0 0.64 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 14 NA NA 0 0 125 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 15 61984045 62856717 1 3 125 0 0 1 0 2 0.39 0 2 0 0 NA NA NA 8 8 8 43.94 35.61 64.26 0 1 2 Whitelist ESAD-UK 2 0.87 0.01 0 0 0.59 1 Linked to high confidence ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA With other complex events 4 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 16 78528054 78886149 1 3 125 3 0 0 0 0 0.03 0.58 6 0 0 6 4 6 7 4 4 43.94 0.38 99.52 0 1 2 Whitelist ESAD-UK 0.41 0.8 0 0 0.33 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 17 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 18 5828126 48677882 1 2 125 1 1 0 0 0 0.57 0.78 3 NA 0 NA NA NA NA NA NA 43.94 99.96 0 0 1 0 Whitelist ESAD-UK 0.68 0.93 NA 0 0.64 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 19 NA NA 0 0 125 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.91 NA NA NA 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 20 14710036 14769064 1 1 125 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 43.94 93 0 0 3 NA Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 21 30833583 31140834 1 1 125 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 43.94 70.29 0 1 3 5 Whitelist ESAD-UK 0.62 1 NA NA 0.59 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 22 23111315 42298738 3 3 125 1 0 1 1 0 0.8 0.06 3 0 0 NA NA NA 4 4 4 43.94 25.43 74.57 0 2 1 Whitelist ESAD-UK 0.87 0.19 0 0 0.84 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-ED-041 X 7078639 93402909 1 5 125 3 2 0 0 0 0.14 0.68 5 0 0 5 5 5 5 5 5 43.94 99.91 0.09 0 1 2 Whitelist ESAD-UK 0.62 0.88 0 0 0.59 1 No ESAD-UK OCCAMS-ED-041 ESAD 0.72 1.9 Eso-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50446 OCCAMS-ED-041 male alive C15.5 no treatment 75 684 684 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 22.5 ESAD-UK::OCCAMS-GS-002 1 NA NA 0 0 134 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 2 NA NA 0 0 134 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 3 60205458 106286282 1 3 134 3 0 0 0 0 0.03 0.31 6 0 0 6 6 6 7 7 7 31.12 0.45 99.52 0 1 2 Whitelist ESAD-UK 0.41 0.56 0 0 0.33 1 Linked to high confidence ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA Canonical without polyploidization 6 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 4 157635386 157737931 2 2 134 1 0 0 1 0 0.57 0.22 3 0 0 NA NA NA 5 5 5 31.12 0.18 99.81 0 2 1 Whitelist ESAD-UK 0.68 0.46 0 0 0.64 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 5 9651609 102870855 1 5 134 2 2 0 0 1 0.26 0.28 4 0 0 4 3 4 5 3 3 31.12 0.22 99.76 0 2 1 Whitelist ESAD-UK 0.68 0.53 0 0 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 6 25217251 125203324 13 15 134 3 3 3 4 2 0.97 0 28 0 0 28 9 23 38 9 10 31.12 93.91 3.28 0 2 3 Whitelist ESAD-UK 3 0.99 0 0 0 0.98 1 High confidence ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA With other complex events 28 0.1 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 7 85351880 115077175 1 1 134 0 0 0 1 0 0.39 0.33 1 0 NA NA NA NA NA NA NA 31.12 0 99.78 0 2 NA Whitelist ESAD-UK 0.62 0.58 0 NA 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 8 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 9 NA NA 0 0 134 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.74 0 NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 10 NA NA 0 0 134 0 0 0 0 0 NA 0.53 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 0 NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 11 23879420 84619104 1 2 134 1 0 1 0 0 0.57 0.1 2 NA 0 NA NA NA NA NA NA 31.12 0.02 99.56 0 1 2 Whitelist ESAD-UK 0.68 0.26 NA 0 0.64 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 12 55512410 66451372 1 1 134 1 0 0 0 0 0.39 0.68 1 0.02 NA NA NA NA 7 3 3 31.12 15.71 84.21 0 2 NA Whitelist ESAD-UK 0.62 0.88 0.02 NA 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 13 23188644 59775992 7 9 134 3 1 2 1 2 0.67 0 33 0 0 33 5 13 37 6 7 31.12 79.4 20.6 7 2 3 Whitelist ESAD-UK 0.68 0 0 0 0.74 1 Low confidence ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA With other complex events 16 0.06 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 14 76254574 76294201 1 1 134 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 31.12 0 96.29 0 2 NA Whitelist ESAD-UK 0.62 0.33 NA NA 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 15 72208325 92967286 5 6 134 1 2 1 1 1 0.9 0 5 0 0 5 5 5 7 5 5 31.12 41.55 58.35 0 2 3 Whitelist ESAD-UK 0.93 0.02 0 0 0.92 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 16 78528634 78828500 1 3 134 2 1 0 0 0 0.3 0.03 4 0 0 4 3 4 11 6 7 31.12 14.95 84.96 0 1 0 Whitelist ESAD-UK 0.62 0.11 0 0 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 17 53288731 54189631 1 1 134 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA 6 3 5 31.12 49.63 45.94 0 2 NA Whitelist ESAD-UK 0.62 0.52 NA NA 0.59 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 18 14104886 36516659 1 2 134 0 2 0 0 0 0.11 0.59 4 NA 0 4 3 4 5 3 3 31.12 93.38 1.98 0 2 1 Whitelist ESAD-UK 0.54 0.81 NA 0 0.48 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 19 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 20 14660894 15447281 3 3 134 3 0 0 0 0 0.03 0.54 3 0 0 NA NA NA NA NA NA 31.12 0.36 98.57 0 2 1 Whitelist ESAD-UK 0.41 0.77 0 0 0.33 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 21 22052534 34770212 9 9 134 0 2 2 5 0 0.13 0 21 0 0 21 3 5 27 6 6 31.12 64.08 13.27 1 1 2 Whitelist ESAD-UK 0.62 0 0 0 0.55 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 18 0.07 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 22 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-GS-002 X 7214879 147752014 1 7 134 5 2 0 0 0 0.02 0.55 9 0 0 9 5 9 9 5 5 31.12 99.42 0.58 0 1 0 Whitelist ESAD-UK 0.41 0.78 0 0 0.33 1 No ESAD-UK OCCAMS-GS-002 ESAD 0.69 1.97 Eso-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7574017_A_C,CN:1 2 ESAD-UK DO50362 OCCAMS-GS-002 male alive C15.5 no treatment 64 117 117 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 3.85 ESAD-UK::OCCAMS-PS-001 1 32249936 245204965 1 6 90 2 0 0 1 3 0.3 0.24 12 0 0 12 4 7 13 4 4 58.31 46.69 50.33 1 4 2 Whitelist ESAD-UK 0.62 0.48 0 0 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 9 0.05 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 2 NA NA 0 0 90 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.49 0 NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 3 60465256 60659204 2 2 90 2 0 0 0 0 0.11 1 3 0 0 NA NA NA 10 4 7 58.31 82.99 13.86 0 2 1 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 4 16755699 16777828 1 1 90 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 58.31 0 99.99 0 2 NA Whitelist ESAD-UK 0.62 0.12 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 5 683512 36882174 1 2 90 1 1 0 0 0 0.57 0.13 1 NA 0.04 NA NA NA NA NA NA 58.31 99.87 0 0 4 NA Whitelist ESAD-UK 0.68 0.32 NA 0.04 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 6 96240534 162907561 1 3 90 1 0 1 1 0 0.8 1 3 0 0 NA NA NA NA NA NA 58.31 99.8 0.05 0 4 2 Whitelist ESAD-UK 0.87 1 0 0 0.84 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 6 0.03 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 7 148571233 148631689 1 1 90 0 0 1 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 58.31 97.38 0.04 0 2 3 Whitelist ESAD-UK 0.62 1 0 NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 8 141612638 141918361 1 1 90 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 58.31 99.78 0.21 0 2 4 Whitelist ESAD-UK 0.62 0.25 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 9 21727819 22120520 2 2 90 1 0 1 0 0 0.57 0.17 3 0 0 NA NA NA 9 5 5 58.31 47.43 52.46 0 2 0 Whitelist ESAD-UK 0.68 0.38 0 0 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 10 NA NA 0 0 90 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.32 NA NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 11 7398369 66888947 1 4 90 0 1 0 1 2 0.57 0.04 6 0 0 6 4 4 8 5 5 58.31 43.86 55.58 0 2 4 Whitelist ESAD-UK 0.68 0.13 0 0 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 6 0.03 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 12 51638579 74896840 17 23 90 5 4 4 4 6 0.98 0 25 0 0 25 3 3 29 3 5 58.31 43.62 52.63 3 4 8 Whitelist ESAD-UK 11 0.95 0 0 0 0.99 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 40 0.22 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 13 60844777 60858484 1 1 90 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 0 3 58.31 78.05 7.8 0 2 3 Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 14 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 16 27212422 30030584 2 3 90 0 0 0 2 1 0.11 0.01 3 0 0 NA NA NA 15 6 6 58.31 48.11 46 0 6 7 Whitelist ESAD-UK 0.62 0.05 0 0 0.48 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 5 0.03 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 17 NA NA 0 0 90 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 18 40476597 41762361 1 1 90 0 0 1 0 0 0.39 0.74 3 NA NA NA NA NA 5 4 4 58.31 53.27 46.72 0 2 4 Whitelist ESAD-UK 0.62 0.91 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 19 4969369 31294416 1 2 90 1 1 0 0 0 0.57 0.7 4 NA 0 4 3 4 5 3 5 58.31 99.73 0.1 0 4 2 Whitelist ESAD-UK 0.68 0.89 NA 0 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 20 33224986 49898940 1 2 90 1 0 0 1 0 0.57 0.72 3 NA 0 NA NA NA 7 3 5 58.31 97.82 1.2 0 2 4 Whitelist ESAD-UK 0.68 0.9 NA 0 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 21 36218031 36235783 1 1 90 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 58.31 0 77.37 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 2 0.01 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 22 NA NA 0 0 90 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.53 NA NA NA 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 0 0 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-001 X 131367089 131448110 2 2 90 0 1 1 0 0 0.57 1 2 0 0 NA NA NA NA NA NA 58.31 0.04 99.96 0 2 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-PS-001 ESAD 0.72 3.17 Eso-AdenoCA NA 4 0.02 NA 16 ESAD-UK DO10844 OCCAMS-PS-001 male deceased C15.5 no treatment 76 761 761 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 25.03 ESAD-UK::OCCAMS-PS-002 1 48933620 193261988 1 3 55 3 0 0 0 0 0.03 1 7 0 0 7 4 4 8 4 5 44.92 48.1 48.89 1 2 3 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 2 2316568 3084151 1 1 55 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 44.92 0.32 99.59 0 1 2 Whitelist ESAD-UK 0.62 0.24 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 3 59828692 175510855 1 3 55 2 1 0 0 0 0.3 0.79 7 0 0 7 4 6 8 4 6 44.92 40.46 59.4 0 3 1 Whitelist ESAD-UK 0.62 0.95 0 0 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 4 25211921 91552325 1 3 55 2 1 0 0 0 0.3 0.27 6 0 0 6 4 6 7 5 5 44.92 0.15 99.83 2 2 3 Whitelist ESAD-UK 0.62 0.51 0 0 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 5 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 6 162230574 162935336 1 2 55 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 5 5 44.92 26.38 73.48 0 1 2 Whitelist ESAD-UK 0.54 1 NA 0 0.48 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 7 110190267 120377283 1 2 55 1 1 0 0 0 0.57 1 2 0 0 NA NA NA NA NA NA 44.92 99.78 0 3 3 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 8 103742468 103825942 1 1 55 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 44.92 0.06 99.94 0 2 3 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 9 9186193 123162710 1 2 55 2 0 0 0 0 0.11 0.48 4 0.14 0.04 4 3 4 5 3 5 44.92 0.53 99.33 0 2 0 Whitelist ESAD-UK 0.54 0.72 0.14 0.04 0.48 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 10 84177273 84254856 2 2 55 2 0 0 0 0 0.11 0.32 3 0 0 NA NA NA 8 6 6 44.92 99.49 0.33 1 1 2 Whitelist ESAD-UK 0.54 0.57 0 0 0.48 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 11 106468702 114303471 1 1 55 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 44.92 5.8 93.77 0 1 2 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 12 50208151 50292100 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 44.92 78.21 21.71 0 3 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 13 87944749 87964903 1 1 55 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 44.92 100 0 1 4 NA Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 14 42960333 43008540 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 44.92 1.23 95.06 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 15 47520822 94076424 1 3 55 0 2 0 0 1 0.11 0.07 4 0 0 4 3 4 5 3 3 44.92 100 0 1 4 3 Whitelist ESAD-UK 0.62 0.2 0 0 0.48 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 5 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 16 63463908 63511511 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 44.92 0 99.87 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 17 19751757 19789341 1 1 55 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 44.92 75.63 24.37 0 2 3 Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 18 18583459 71771358 4 4 55 1 1 1 1 0 1 0.06 5 0 0 5 4 5 5 4 4 44.92 95.35 0 2 3 1 Whitelist ESAD-UK 1 0.19 0 0 1 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 8 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 19 46094947 46158946 1 2 55 0 0 0 1 1 0.39 0.02 2 NA NA NA NA NA NA NA NA 44.92 99.54 0 0 3 4 Whitelist ESAD-UK 0.68 0.09 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 3 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 20 14684847 15213377 2 2 55 2 0 0 0 0 0.11 0 5 0 0 5 4 5 8 4 5 44.92 98.44 0.59 0 1 2 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-002 X 142137755 142153249 1 1 55 0 1 0 0 0 0.39 0.76 2 NA NA NA NA NA 4 3 3 44.92 7.18 92.82 2 2 3 Whitelist ESAD-UK 0.62 0.92 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-002 ESAD 0.33 2.56 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 ESAD-UK DO10843 OCCAMS-PS-002 male alive C15.5 no treatment 76 1284 1284 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 42.24 ESAD-UK::OCCAMS-PS-008 1 10498795 150055971 3 8 317 1 1 1 0 5 0.8 0.21 24 0 0 24 4 6 43 5 8 51.98 68.07 28.95 2 4 3 Whitelist ESAD-UK 2 0.87 0.44 0 0 0.84 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 2 20292119 238542386 1 30 317 6 11 0 1 12 0 0.1 41 0 0 41 8 23 46 8 8 51.98 59.09 40.81 0 3 2 Whitelist ESAD-UK X 0.21 0.27 0 0 0.04 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 48 0.08 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 3 60069721 60212092 2 2 317 0 0 1 1 0 0.57 0.22 3 0 0 NA NA NA 31 5 10 51.98 28.49 68.45 0 1 2 Whitelist ESAD-UK 0.68 0.46 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 4 92085141 151714289 1 2 317 2 0 0 0 0 0.11 0 4 0 0 4 3 4 8 3 5 51.98 0.58 99.3 0 2 0 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 5 15723109 15733480 2 2 317 0 0 1 1 0 0.57 0.35 2 0 0 NA NA NA 26 6 6 51.98 71.02 26.28 1 4 5 Whitelist ESAD-UK 0.68 0.61 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 6 1684302 2030948 2 2 317 0 0 1 1 0 0.57 0.19 2 0 0 NA NA NA 20 3 9 51.98 98 1.77 0 2 3 Whitelist ESAD-UK 0.68 0.41 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 7 2256285 157129293 1 13 317 5 5 0 0 3 0.02 1 22 0 0 22 4 5 23 4 5 51.98 56.3 41.27 1 3 2 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 8 21740006 141248299 1 14 317 6 4 0 0 4 0.01 0.09 20 0 0 20 4 7 23 4 7 51.98 93.97 5.56 2 4 3 Whitelist ESAD-UK 15 0.23 0.26 0 0 0.23 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 9 451271 88586882 1 7 317 1 3 1 1 1 0.57 0.15 13 0 0 13 5 8 15 5 5 51.98 39.26 58.3 0 2 1 Whitelist ESAD-UK 0.62 0.34 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 10 14697488 112307842 1 17 317 7 3 0 0 7 0 0.5 21 0 0 21 3 8 23 3 8 51.98 71.73 24.28 0 4 3 Whitelist ESAD-UK 2 0.41 0.74 0 0 0.14 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 27 0.04 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 11 2684606 59762313 2 4 317 0 3 1 0 0 0.11 0.11 17 0 0 17 3 7 25 4 8 51.98 43.94 52.8 0 2 4 Whitelist ESAD-UK 0.54 0.28 0 0 0.48 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 12 56497359 116583812 1 5 317 1 1 1 0 2 0.8 0.23 5 0 0 5 4 5 10 4 4 51.98 42.25 54 0 2 3 Whitelist ESAD-UK 0.62 0.47 0 0 0.84 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 13 41752596 74141624 1 8 317 0 4 1 0 3 0.04 0.44 7 0 0 7 3 5 9 3 5 51.98 82.97 2.88 0 3 4 Whitelist ESAD-UK 0.54 0.69 0 0 0.36 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 14 69329610 74064098 3 3 317 0 0 2 1 0 0.3 0.07 6 0 0 6 0 3 21 3 5 51.98 84.05 0.03 0 3 1 Whitelist ESAD-UK 0.62 0.21 0 0 0.59 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 15 41086920 93388580 1 13 317 2 5 0 1 5 0.07 0.08 15 0 0 15 5 9 16 5 10 51.98 23.67 60.79 0 2 3 Whitelist ESAD-UK 0.62 0.24 0 0 0.48 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 16 78576803 78761526 2 2 317 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 21 3 5 51.98 10.69 84.01 0 1 0 Whitelist ESAD-UK 0.54 0.04 0 0 0.48 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 17 75126213 76124096 2 2 317 0 0 1 1 0 0.57 0.04 2 0 0 NA NA NA 17 6 8 51.98 19.63 75.93 0 0 2 Whitelist ESAD-UK 0.68 0.13 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 18 55632973 55830497 1 1 317 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 11 3 6 51.98 95.35 0 0 4 NA Whitelist ESAD-UK 0.62 1 0 NA 0.59 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 19 30549584 30647962 2 2 317 1 0 1 0 0 0.57 0 5 0 0 5 0 3 34 5 5 51.98 34.42 58.3 1 7 15 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 20 25435313 48833068 2 5 317 1 1 0 0 3 0.57 0.03 7 0 0 7 3 6 15 4 6 51.98 92.08 0.79 0 4 7 Whitelist ESAD-UK 0.68 0.11 0 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 21 25387873 25430764 1 1 317 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 51.98 0.76 76.59 0 2 NA Whitelist ESAD-UK 0.62 0.42 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 22 29685466 40880323 1 2 317 1 1 0 0 0 0.57 0.6 2 NA 0 NA NA NA NA NA NA 51.98 76.22 0 0 3 5 Whitelist ESAD-UK 0.68 0.81 NA 0 0.64 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-008 X 7304080 96682886 1 11 317 7 1 1 0 2 0 0.8 17 0 0 17 6 6 18 7 11 51.98 25.68 71.16 0 2 1 Whitelist ESAD-UK 2 0.41 0.95 0 0 0.11 0 No ESAD-UK OCCAMS-PS-008 ESAD 0.38 2.63 Eso-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7578394_A_T,CN:2 3 ESAD-UK DO10858 OCCAMS-PS-008 female deceased C15.5 no treatment 62 788 788 Current smoker (includes daily smokers non-daily/occasional smokers) 18 no None Included Eso-AdenoCA ESAD UK 1 25.92 ESAD-UK::OCCAMS-PS-012 1 NA NA 0 0 165 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.14 0 NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 2 5579139 8930469 13 14 165 5 5 1 2 1 0.27 0 11 0 0 11 7 11 42 8 14 36.4 36.98 62.92 0 3 2 Whitelist ESAD-UK 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 27 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 False positive; manually removed ESAD-UK::OCCAMS-PS-012 3 60151899 60570735 2 2 165 2 0 0 0 0 0.11 0 6 0 0 6 5 6 19 8 8 36.4 24.62 75.26 0 1 0 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 4 184103587 184122621 1 1 165 1 0 0 0 0 0.39 0.08 2 0 NA NA NA NA 9 5 5 36.4 1.68 98.12 1 1 2 Whitelist ESAD-UK 0.62 0.24 0 NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 5 12682508 64173589 3 4 165 1 0 1 1 1 0.8 0.52 1 0 0 NA NA NA 4 4 4 36.4 1.92 97.93 0 2 NA Whitelist ESAD-UK 0.68 0.76 0 0 0.84 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 6 1857779 1928444 1 1 165 0 1 0 0 0 0.39 0.74 2 0 NA NA NA NA 9 4 7 36.4 33.64 63.43 0 1 2 Whitelist ESAD-UK 0.62 0.91 0 NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 7 3498667 127744262 1 5 165 1 3 0 0 1 0.11 0.86 7 0 0 7 3 5 9 3 5 36.4 99.77 0 1 3 1 Whitelist ESAD-UK 0.45 1 0 0 0.48 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 8 18479297 123519175 1 7 165 1 1 0 0 5 0.57 0.11 7 0 0 7 3 5 8 3 6 36.4 5.1 94.79 0 2 0 Whitelist ESAD-UK 3 0.62 0.28 0 0 0.64 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 9 NA NA 0 0 165 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 0 NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 10 NA NA 0 0 165 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 NA NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 11 6037877 77866134 1 7 165 6 1 0 0 0 0 0.13 14 0 0 14 4 6 17 4 6 36.4 70.83 25.69 3 2 5 Whitelist ESAD-UK 0.13 0.33 0 0 0.09 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 12 44475204 71795945 1 4 165 0 0 1 1 2 0.57 0.46 2 0 0 NA NA NA NA NA NA 36.4 87.53 12.39 0 2 3 Whitelist ESAD-UK 0.68 0.7 0 0 0.64 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 13 NA NA 0 0 165 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 14 88984250 89020901 1 1 165 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA 6 6 6 36.4 81.03 18.06 0 2 NA Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 15 55687495 57509847 1 4 165 1 1 1 1 0 1 0.23 2 0 0 NA NA NA 5 4 4 36.4 49.38 50.62 0 2 3 Whitelist ESAD-UK 1 0.47 0 0 1 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 16 9968933 88941876 1 7 165 3 1 1 0 2 0.28 0.22 9 0 0 9 3 6 10 3 3 36.4 35.88 63.71 1 2 1 Whitelist ESAD-UK 0.77 0.45 0 0 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 17 14902113 15001710 1 1 165 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 5 5 36.4 50.03 49.96 0 2 3 Whitelist ESAD-UK 0.62 0.34 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 18 41946887 48599413 1 3 165 1 1 1 0 0 0.8 0.01 3 0 0 NA NA NA 6 3 4 36.4 75.64 19.72 0 1 2 Whitelist ESAD-UK 0.87 0.06 0 0 0.84 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 19 NA NA 0 0 165 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 20 NA NA 0 0 165 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 21 29359167 31627706 1 2 165 1 1 0 0 0 0.57 0.46 4 0 0 4 3 4 7 3 3 36.4 2.86 74.49 0 2 1 Whitelist ESAD-UK 0.68 0.7 0 0 0.64 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 22 34245587 34339422 1 1 165 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 36.4 89.9 10.1 0 1 NA Whitelist ESAD-UK 0.62 0.9 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-012 X 66460041 66646749 1 1 165 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 36.4 99.65 0.12 0 1 2 Whitelist ESAD-UK 0.62 0.36 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-012 ESAD 0.44 2.14 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 ESAD-UK DO10839 OCCAMS-PS-012 female deceased C15.5 no treatment 79 332 332 Current reformed smoker, duration not specified 15 no None Included Eso-AdenoCA ESAD UK 1 10.92 ESAD-UK::OCCAMS-PS-013 1 193309911 196936704 7 7 162 3 1 1 2 0 0.67 0 8 0 0 8 4 5 32 4 5 55.64 82.3 14.35 0 3 1 Whitelist ESAD-UK 0.77 0 0 0 0.74 0 Low confidence ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA With other complex events 14 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 2 85663789 226354561 1 11 162 1 4 1 0 5 0.11 0 14 0 0 14 4 7 20 4 6 55.64 60.04 37.24 1 3 8 Whitelist ESAD-UK 0.87 0 0 0 0.48 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 17 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 3 60303300 60694778 3 3 162 3 0 0 0 0 0.03 0.54 6 0 0 6 5 6 9 5 5 55.64 87.57 12.4 0 2 1 Whitelist ESAD-UK 0.41 0.77 0 0 0.33 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 4 129133701 129656134 1 1 162 0 0 0 1 0 0.39 0.43 1 0 NA NA NA NA 4 3 3 55.64 6.61 93.18 0 2 NA Whitelist ESAD-UK 0.62 0.68 0 NA 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 5 21912424 132211111 1 15 162 1 3 0 0 11 0.11 0.02 18 0 0 18 10 14 23 10 10 55.64 14.17 85.7 2 2 4 Whitelist ESAD-UK 0.68 0.08 0 0 0.48 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 19 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 6 2152372 162481540 1 7 162 3 4 0 0 0 0.06 0.51 11 0 0 11 4 7 12 5 7 55.64 50.67 49.18 0 2 1 Whitelist ESAD-UK 0.54 0.75 0 0 0.48 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 7 3424115 158428992 1 13 162 3 2 0 0 8 0.14 0 23 0 0 23 4 5 24 4 5 55.64 93.09 4.36 4 3 4 Whitelist ESAD-UK 0.54 0.02 0 0 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 18 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 8 48878697 95648773 1 5 162 0 2 0 1 2 0.3 0.47 6 0 0 6 0 4 11 3 6 55.64 90.86 5.19 0 3 4 Whitelist ESAD-UK 0.68 0.72 0 0 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 9 NA NA 0 0 162 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.27 NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 10 NA NA 0 0 162 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 11 74211031 98357158 1 2 162 0 2 0 0 0 0.11 0.04 1 NA 0 NA NA NA 5 5 5 55.64 82.7 13.71 0 3 NA Whitelist ESAD-UK 0.54 0.13 NA 0 0.48 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 12 8638285 123798164 1 2 162 0 1 1 0 0 0.57 0.04 4 NA 0.04 4 4 4 8 8 8 55.64 93.23 6.69 0 2 3 Whitelist ESAD-UK 0.68 0.13 NA 0.04 0.64 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 13 47085504 47123192 1 1 162 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 55.64 82.18 3.67 0 3 NA Whitelist ESAD-UK 0.62 0.16 NA NA 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 14 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 15 22857686 90859173 1 4 162 2 1 0 0 1 0.3 1 5 0 0 5 4 5 5 4 4 55.64 77.48 2.33 0 3 4 Whitelist ESAD-UK 0.68 1 0 0 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 16 78232144 78855671 1 4 162 4 0 0 0 0 0.01 0.63 5 0 0 5 5 5 8 7 8 55.64 0.1 85.8 0 2 1 Whitelist ESAD-UK 0.21 0.84 0 0 0.16 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 17 NA NA 0 0 162 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 18 18976228 23669906 4 7 162 0 1 3 0 3 0.11 0 16 0 0 16 4 4 20 4 4 55.64 19.64 78.87 9 8 7 Whitelist ESAD-UK 0.62 0 0 0 0.48 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 19 NA NA 0 0 162 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.34 0 NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 20 3969035 15728421 1 3 162 1 2 0 0 0 0.3 0 4 0 0 4 3 4 15 4 8 55.64 92.79 0.04 0 6 7 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 21 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 22 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-013 X 31722767 153973646 1 4 162 2 2 0 0 0 0.26 0.37 5 0 0 5 4 5 5 4 5 55.64 37.47 59.38 0 2 3 Whitelist ESAD-UK 0.62 0.62 0 0 0.59 0 No ESAD-UK OCCAMS-PS-013 ESAD 0.41 2.62 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO10840 OCCAMS-PS-013 male alive C15.5 no treatment 73 1011 1011 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 33.26 ESAD-UK::OCCAMS-PS-014 1 55005769 55025946 1 1 53 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 0 5 33.91 22.88 74.15 0 2 3 Whitelist ESAD-UK 0.62 0.32 NA NA 0.59 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 2 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 3 10840533 149005314 9 21 53 2 3 2 2 12 0.95 0 30 0 0 30 7 13 34 7 13 33.91 77.96 18.87 0 1 3 Whitelist ESAD-UK 9 0.89 0 0 0 0.97 1 High confidence ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA With other complex events 30 0.28 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 4 NA NA 0 0 53 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.51 NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 5 NA NA 0 0 53 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 6 NA NA 0 0 53 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 7 110572958 110751688 1 1 53 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 33.91 0.24 99.53 0 1 NA Whitelist ESAD-UK 0.62 0.62 NA NA 0.59 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 8 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 9 3720535 31869665 4 16 53 1 0 2 1 12 0.57 0 15 0 0 15 7 15 25 9 25 33.91 40.69 56.79 0 1 3 Whitelist ESAD-UK 3 0.95 0 0 0 0.64 1 High confidence ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA With other complex events 20 0.19 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 10 NA NA 0 0 53 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 11 21444633 108201683 1 2 53 2 0 0 0 0 0.11 1 5 NA 0 5 0 4 6 3 4 33.91 38.97 57.43 0 1 2 Whitelist ESAD-UK 0.54 1 NA 0 0.48 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 12 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 13 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 14 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 15 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 16 78784296 79322896 1 2 53 1 1 0 0 0 0.57 0.65 3 NA 0 NA NA NA 4 0 4 33.91 0.99 98.92 0 1 2 Whitelist ESAD-UK 0.68 0.86 NA 0 0.64 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 17 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 18 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 19 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 20 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 22 40579674 40657003 1 1 53 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 33.91 76.22 0 0 1 3 Whitelist ESAD-UK 0.62 0.71 NA NA 0.59 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-PS-014 X 6630380 32220149 1 5 53 5 0 0 0 0 0 0.19 1 0 0 NA NA NA NA NA NA 33.91 100 0 0 1 NA Whitelist ESAD-UK 0.1 0.41 0 0 0.07 1 No ESAD-UK OCCAMS-PS-014 ESAD 0.22 1.96 Eso-AdenoCA NA 10 0.09 nonsynonymous_SNV,17_7578268_C_A,CN:3 2 ESAD-UK DO10841 OCCAMS-PS-014 male alive C15.5 chemotherapy unknown 63 1312 1312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 43.16 ESAD-UK::OCCAMS-QE-095 1 48304745 246628974 1 15 247 7 4 0 0 4 0.01 0.64 29 0 0 29 8 13 30 8 8 42.46 91.41 5.55 2 3 4 Whitelist ESAD-UK 0.62 0.85 0 0 0.16 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 26 0.05 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 2 47217884 215282385 1 9 247 3 1 0 0 5 0.11 0.08 10 0 0 10 5 6 12 6 6 42.46 13.01 86.87 1 2 1 Whitelist ESAD-UK 17_3 0.41 0.24 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA With other complex events 13 0.03 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 3 51605767 97905552 2 8 247 1 2 1 0 4 0.57 0.26 10 0 0 10 5 10 15 5 5 42.46 20.81 76.1 0 1 0 Whitelist ESAD-UK 0.87 0.5 0 0 0.64 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 12 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 4 91904836 91936103 3 3 247 2 0 1 0 0 0.3 0.07 3 0 0 NA NA NA 12 3 5 42.46 74.75 25.1 0 2 0 Whitelist ESAD-UK 0.62 0.21 0 0 0.59 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 6 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 5 58889907 129722541 1 5 247 5 0 0 0 0 0 0.19 12 0 0 12 11 12 13 11 13 42.46 0.76 99.12 0 2 1 Whitelist ESAD-UK 0.1 0.41 0 0 0.07 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 6 147905990 148287980 2 2 247 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 15 5 7 42.46 22.51 74.66 0 1 2 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 7 27948258 157460631 1 13 247 8 2 0 0 3 0 0.32 18 0 0 18 8 18 18 8 8 42.46 45.97 53.81 0 2 3 Whitelist ESAD-UK 0.06 0.57 0 0 0.04 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 23 0.05 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 8 63737247 128301837 1 4 247 1 3 0 0 0 0.11 0.06 8 0 0 8 5 8 9 5 5 42.46 99.99 0 0 3 4 Whitelist ESAD-UK 0.54 0.18 0 0 0.48 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 8 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 9 8609506 126140253 1 16 247 10 1 0 1 4 0 0 32 0 0 32 8 8 35 8 8 42.46 66.54 32.78 0 1 2 Whitelist ESAD-UK 5 0.21 0 0 0 0.01 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 28 0.06 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 10 22525806 103809763 1 8 247 6 2 0 0 0 0.01 0.88 15 0 0 15 7 15 15 7 7 42.46 0.6 99.24 0 2 3 Whitelist ESAD-UK 0.21 1 0 0 0.16 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 16 0.03 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 11 4179305 48829847 1 4 247 2 2 0 0 0 0.26 0.36 6 0 0 6 5 6 7 5 5 42.46 98.47 0.97 0 3 2 Whitelist ESAD-UK 0.62 0.62 0 0 0.59 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 8 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 12 8421830 8432574 1 1 247 1 0 0 0 0 0.39 0.36 1 0 NA NA NA NA NA NA NA 42.46 0 99.81 0 2 NA Whitelist ESAD-UK 0.62 0.62 0 NA 0.59 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 13 21441235 114512161 1 3 247 1 2 0 0 0 0.3 0.05 5 0 0 5 4 5 6 5 5 42.46 99.42 0.01 0 3 4 Whitelist ESAD-UK 0.62 0.17 0 0 0.59 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 6 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 14 64636718 103622696 1 6 247 4 2 0 0 0 0.06 0.85 7 0 0 7 5 7 8 6 6 42.46 28.85 70.24 0 2 1 Whitelist ESAD-UK 0.54 0.99 0 0 0.48 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 12 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 15 44446831 53778736 1 2 247 0 2 0 0 0 0.11 0.33 4 0 0 4 3 4 7 3 5 42.46 93.22 2 0 3 4 Whitelist ESAD-UK 0.54 0.59 0 0 0.48 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 16 78428645 78779139 2 2 247 2 0 0 0 0 0.11 0.32 4 0 0 4 0 3 12 7 7 42.46 25.22 74.69 0 0 1 Whitelist ESAD-UK 0.54 0.57 0 0 0.48 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 17 25534782 75535929 29 32 247 11 3 7 8 3 0.21 0 56 0 0 56 6 7 57 6 7 42.46 26.76 67.77 0 2 4 Whitelist ESAD-UK 2 0.62 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA With other complex events 61 0.12 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 18 43355634 68046839 1 2 247 1 1 0 0 0 0.57 0.43 4 0 0 4 3 4 5 3 3 42.46 0.2 99.76 0 2 1 Whitelist ESAD-UK 0.68 0.68 0 0 0.64 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 19 21309464 21321967 1 1 247 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 4 3 3 42.46 51.65 41.07 0 1 2 Whitelist ESAD-UK 0.62 0.49 NA NA 0.59 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 20 14533158 15352307 5 5 247 5 0 0 0 0 0 0.01 7 0 0 7 3 7 12 3 4 42.46 97.96 1.07 0 1 2 Whitelist ESAD-UK 0.1 0.06 0 0 0.07 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 21 NA NA 0 0 247 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 22 30916907 46585903 1 2 247 0 1 0 1 0 0.57 0.77 6 0 0 6 5 6 9 5 5 42.46 1.32 98.68 0 2 1 Whitelist ESAD-UK 0.68 0.93 0 0 0.64 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-QE-095 X 6665084 150768368 1 10 247 9 1 0 0 0 0 0.46 20 0 0 20 18 20 24 22 22 42.46 14.66 81.58 0 2 1 Whitelist ESAD-UK 0.01 0.71 0 0 0.01 0 No ESAD-UK OCCAMS-QE-095 ESAD 0.61 2.48 Eso-AdenoCA NA 20 0.04 stopgain,17_7577022_A_G,CN:2 2 ESAD-UK DO50364 OCCAMS-QE-095 male alive C15.5 no treatment 59 661 661 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 21.74 ESAD-UK::OCCAMS-RS-006 1 19503439 26419833 3 4 198 0 2 1 0 1 0.3 0.43 7 0 0 7 5 6 17 8 8 35.5 57.63 42.37 1 3 4 Whitelist ESAD-UK 0.68 0.68 0 0 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 7 0.02 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 2 11537277 117535028 6 25 198 2 1 1 2 19 0.88 0 15 0 0 15 15 15 23 23 23 35.5 10.33 89.58 4 2 1 Whitelist ESAD-UK 13_7 0.81 0 0 0 0.91 1 High confidence ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA Canonical without polyploidization 31 0.08 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 3 102445710 118662971 4 4 198 1 1 1 1 0 1 1 1 0 0 NA NA NA 10 5 5 35.5 6.37 93.6 0 2 NA Whitelist ESAD-UK 1 1 0 0 1 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 8 0.02 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 4 147934558 167525397 1 2 198 1 1 0 0 0 0.57 0.01 4 0 0 4 3 4 9 5 5 35.5 72.17 25.37 0 1 0 Whitelist ESAD-UK 0.68 0.06 0 0 0.64 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 4 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 5 59007646 59071671 1 1 198 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA 7 4 4 35.5 26.8 73.07 0 0 1 Whitelist ESAD-UK 0.62 0.18 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 6 1697491 2047936 1 1 198 1 0 0 0 0 0.39 0 2 0.01 NA NA NA NA 7 3 3 35.5 68.83 30.98 0 1 2 Whitelist ESAD-UK 0.62 0.02 0.01 NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 7 39659225 139835185 1 28 198 1 1 1 1 24 1 0 20 0 0 20 7 13 20 7 7 35.5 5.54 94.24 0 2 1 Whitelist ESAD-UK 13_2 0.75 0 0 0 1 1 Linked to high confidence ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA With other complex events 32 0.08 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 8 100168793 128288351 1 2 198 1 1 0 0 0 0.57 0.01 3 NA 0 NA NA NA NA NA NA 35.5 0.09 99.91 0 2 3 Whitelist ESAD-UK 0.68 0.06 NA 0 0.64 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 4 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 9 4679853 4693971 1 2 198 0 0 0 1 1 0.39 0 1 0 NA NA NA NA 11 11 11 35.5 3.11 96.19 0 2 NA Whitelist ESAD-UK 0.68 0 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 3 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 10 12066324 82788252 1 6 198 3 1 1 1 0 0.57 0.61 12 0 0 12 4 6 13 5 6 35.5 46.51 53.3 2 2 1 Whitelist ESAD-UK 0.68 0.82 0 0 0.64 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 12 0.03 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 11 19395779 132868406 1 11 198 3 2 1 1 4 0.67 0.03 15 0 0 15 3 4 15 3 4 35.5 2.17 97.41 1 2 4 Whitelist ESAD-UK 1 0.98 0.11 0 0 0.74 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 18 0.05 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 12 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 13 31550607 112847786 4 23 198 2 1 0 1 19 0.57 0 7 0 0 7 4 7 9 6 6 35.5 37.96 62.04 1 1 2 Whitelist ESAD-UK 2_7 0.95 0 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA With other complex events 27 0.07 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 14 21485209 105773565 1 6 198 2 2 0 0 2 0.26 0.41 12 0 0 12 3 12 14 3 4 35.5 69.16 27.16 0 2 1 Whitelist ESAD-UK 0.93 0.66 0 0 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 10 0.03 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 15 41685364 41706914 1 1 198 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 35.5 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.16 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 16 26383134 49257322 1 1 198 0 1 0 0 0 0.39 0.82 5 0 NA 5 3 3 10 6 8 35.5 34.5 65.4 0 1 2 Whitelist ESAD-UK 0.62 0.96 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 17 50758967 64888510 16 16 198 5 3 4 4 0 0.92 0 11 0 0 11 5 11 21 6 6 35.5 52.45 43.12 0 2 1 Whitelist ESAD-UK 0.95 0 0 0 0.94 1 Low confidence ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA With other complex events 32 0.08 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 18 8405331 59143151 1 5 198 1 0 0 0 4 0.39 0.38 7 0 0 7 4 5 8 4 5 35.5 65.25 34.71 0 1 2 Whitelist ESAD-UK 7 0.62 0.63 0 0 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 6 0.02 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 19 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 20 30996069 38399622 1 3 198 1 1 0 0 1 0.57 1 5 0 0 5 3 5 9 4 8 35.5 52.18 41.42 0 3 1 Whitelist ESAD-UK 0.87 1 0 0 0.64 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 5 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 21 20794913 20913097 1 1 198 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA 4 3 3 35.5 7.31 70.04 0 2 3 Whitelist ESAD-UK 0.62 0.91 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 2 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 22 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 0 0 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-006 X 6494575 6597826 2 2 198 0 2 0 0 0 0.11 0.87 2 0 0 NA NA NA 14 10 10 35.5 67.17 29.19 0 1 2 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-RS-006 ESAD 0.49 1.67 Eso-AdenoCA NA 4 0.01 frameshift_insertion,17_7577595_AGTA_-,CN:1 1 ESAD-UK DO50365 OCCAMS-RS-006 female deceased C15.5 no treatment 73 345 345 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 11.35 ESAD-UK::OCCAMS-RS-007 1 1466666 7734632 3 3 242 1 0 1 1 0 0.8 0.06 6 0 0 6 3 6 18 4 9 54.5 65.79 31.24 0 1 3 Whitelist ESAD-UK 0.87 0.18 0 0 0.84 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 6 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 2 63428848 236752811 1 10 242 4 2 1 1 2 0.39 0.73 10 0 0 10 3 6 11 3 7 54.5 99.65 0.26 0 3 1 Whitelist ESAD-UK 0.68 0.9 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 18 0.04 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 3 59833747 60619564 1 2 242 2 0 0 0 0 0.11 0 4 0 0 4 4 4 6 5 5 54.5 52.82 44.12 0 0 2 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 4 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 4 124056 24705189 17 17 242 3 5 4 5 0 0.89 0 37 0 0 37 10 17 70 10 10 54.5 37.67 62.23 0 3 4 Whitelist ESAD-UK 0.93 0 0 0 0.92 1 High confidence ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA With other complex events 34 0.07 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 5 8944460 169455758 1 8 242 2 3 0 0 3 0.14 0.69 16 0 0 16 9 13 17 9 9 54.5 11.11 88.77 1 2 1 Whitelist ESAD-UK 0.41 0.89 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 13 0.03 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 6 36582274 170252797 1 14 242 6 3 0 0 5 0.01 0.06 26 0 0 26 7 10 27 7 10 54.5 70.57 29.28 0 4 2 Whitelist ESAD-UK 0.54 0.18 0 0 0.21 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 23 0.05 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 7 16848180 125797151 1 4 242 2 2 0 0 0 0.26 0.11 10 0 0 10 3 6 14 5 6 54.5 97.41 0.04 0 3 5 Whitelist ESAD-UK 0.62 0.29 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 8 0.02 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 8 124189921 136995344 3 3 242 0 0 2 1 0 0.3 0.06 14 0 0 14 4 5 29 4 7 54.5 92.28 7.72 0 4 6 Whitelist ESAD-UK 0.62 0.18 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 6 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 9 38034660 103853176 1 2 242 0 1 1 0 0 0.57 0.07 1 0 0 NA NA NA NA NA NA 54.5 0 99.33 0 2 NA Whitelist ESAD-UK 0.68 0.2 0 0 0.64 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 4 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 10 77625978 77724508 1 1 242 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA 5 5 5 54.5 0.08 99.75 0 1 2 Whitelist ESAD-UK 0.62 0.19 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 2 0 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 11 1026839 131851126 1 5 242 2 3 0 0 0 0.14 0.22 9 0 0 9 3 5 10 4 5 54.5 99.54 0.04 0 3 4 Whitelist ESAD-UK 0.62 0.46 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 10 0.02 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 12 25246063 31515072 11 11 242 6 1 0 4 0 0.04 0 41 0 0 41 4 4 57 8 8 54.5 29.94 66.12 0 5 7 Whitelist ESAD-UK 0.49 0 0 0 0.41 1 Low confidence ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA With other complex events 22 0.05 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 13 38696033 69471073 1 5 242 3 2 0 0 0 0.14 0.59 8 0 0 8 5 8 10 6 9 54.5 5.14 80.71 0 1 2 Whitelist ESAD-UK 0.62 0.81 0 0 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 10 0.02 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 14 39653147 93030906 1 7 242 3 4 0 0 0 0.06 0.58 11 0 0 11 4 5 13 4 6 54.5 60.32 23.77 0 3 2 Whitelist ESAD-UK 0.54 0.8 0 0 0.48 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 14 0.03 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 15 NA NA 0 0 242 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.22 NA NA NA 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 0 0 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 16 72223697 89537486 1 7 242 6 0 0 0 1 0 0 15 0 0 15 5 10 23 5 8 54.5 49.92 49.08 0 1 2 Whitelist ESAD-UK 0.13 0.02 0 0 0.03 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 13 0.03 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 17 51028070 70166967 1 3 242 1 1 0 1 0 0.8 0.43 9 0 0 9 3 5 12 3 6 54.5 5.19 90.37 0 2 3 Whitelist ESAD-UK 0.87 0.68 0 0 0.84 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 6 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 18 21059310 72487446 1 2 242 0 1 1 0 0 0.57 0.84 5 0 0 5 0 3 11 0 0 54.5 88.19 7.16 0 1 2 Whitelist ESAD-UK 0.68 0.98 0 0 0.64 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 4 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 19 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 0 0 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 20 14805213 14913562 1 1 242 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 3 54.5 0.17 92.75 0 0 2 Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 2 0 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 21 21518315 36260870 1 7 242 2 1 0 1 3 0.57 0 9 0 0 9 3 4 11 4 4 54.5 75.49 0.2 0 3 1 Whitelist ESAD-UK 6 0.96 0 0 0 0.64 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 11 0.02 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 22 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 0 0 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-007 X 6850523 6988729 2 2 242 2 0 0 0 0 0.11 0.66 1 0 0 NA NA NA NA NA NA 54.5 99.99 0.01 0 1 NA Whitelist ESAD-UK 0.54 0.87 0 0 0.48 1 No ESAD-UK OCCAMS-RS-007 ESAD 0.48 2.58 Eso-AdenoCA NA 4 0.01 stopgain,17_7578239_A_C,CN:2 2 ESAD-UK DO50447 OCCAMS-RS-007 male deceased C15.5 no treatment 72 306 306 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 10.07 ESAD-UK::OCCAMS-RS-008 1 200693009 220848036 2 2 303 0 0 1 1 0 0.57 0 4 0 0 4 4 4 21 6 6 55.09 45.35 51.66 0 2 3 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA Canonical without polyploidization 4 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 2 43419451 218499373 1 21 303 3 2 0 1 15 0.34 0.84 19 0 0 19 18 19 20 18 20 55.09 53.72 46.18 0 2 4 Whitelist ESAD-UK 11_12 0.95 0.97 0 0 0.59 1 Linked to low confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA Before polyploidization 27 0.04 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 3 3757703 186619491 1 7 303 2 1 1 1 2 0.9 0 13 0 0 13 7 9 14 7 10 55.09 63.93 35.95 0 4 2 Whitelist ESAD-UK 18 0.96 0 0 0 0.92 1 Linked to high confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 12 0.02 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 4 40383342 75189285 1 3 303 1 2 0 0 0 0.3 0 1 0 0 NA NA NA NA NA NA 55.09 99.82 0 0 3 NA Whitelist ESAD-UK 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 6 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 5 NA NA 0 0 303 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 6 55525409 88702537 5 33 303 1 2 1 1 28 0.9 0 15 0 0 15 5 10 19 7 12 55.09 17.85 78.94 0 2 3 Whitelist ESAD-UK 16_18 0.91 0 0 0 0.92 1 Linked to high confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 38 0.06 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 7 NA NA 0 0 303 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.01 0 NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 8 5962397 66833377 1 2 303 2 0 0 0 0 0.11 0 4 0.07 0.04 4 4 4 4 4 4 55.09 99.99 0 0 1 3 Whitelist ESAD-UK 0.54 0 0.07 0.04 0.48 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 4 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 9 35496485 138847530 1 6 303 3 1 0 1 1 0.28 0.18 5 0 0 5 4 5 7 4 5 55.09 12.64 86.66 1 2 4 Whitelist ESAD-UK 0.62 0.4 0 0 0.59 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 11 0.02 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 10 NA NA 0 0 303 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 11 38894113 101762285 21 80 303 5 4 6 6 59 0.91 0 51 0 0 51 6 11 56 6 6 55.09 27.78 71.8 1 2 5 Whitelist ESAD-UK 12_2 0.68 0 0 0 0.94 1 Low confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 101 0.17 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 12 1702270 74329204 57 131 303 17 12 12 16 74 0.69 0 69 0 0 69 5 5 72 5 5 55.09 17.99 78.33 2 2 4 Whitelist ESAD-UK 11_2 0.96 0 0 0 0.77 1 Low confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 188 0.31 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 13 NA NA 0 0 303 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 14 51822311 61572277 1 2 303 1 0 1 0 0 0.57 0.01 2 NA 0 NA NA NA 6 3 6 55.09 84.06 0.03 0 2 4 Whitelist ESAD-UK 0.68 0.04 NA 0 0.64 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 4 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 15 80311657 80900403 1 1 303 0 0 0 1 0 0.39 0 2 NA NA NA NA NA NA NA NA 55.09 20.96 74.12 0 2 3 Whitelist ESAD-UK 0.62 0.02 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 2 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 16 6359040 10487621 1 6 303 1 0 0 0 5 0.39 0 7 0 0 7 5 7 17 7 15 55.09 73.31 22.17 0 2 4 Whitelist ESAD-UK 0.62 0.01 0 0 0.59 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 7 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 17 NA NA 0 0 303 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 18 28233723 70007646 7 34 303 1 2 2 2 27 0.93 0 19 0 0 19 8 11 29 9 10 55.09 40.61 59.35 0 4 2 Whitelist ESAD-UK 6 0.87 0 0 0 0.95 1 High confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 41 0.07 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 19 NA NA 0 0 303 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 20 10454766 62655650 11 13 303 3 2 4 2 2 0.8 0 30 0 0 30 7 19 33 7 7 55.09 86.69 12.67 2 3 4 Whitelist ESAD-UK 1 0.8 0 0 0 0.84 1 High confidence ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA With other complex events 24 0.04 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 21 NA NA 0 0 303 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.53 NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 22 NA NA 0 0 303 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 0 0 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-008 X 94128065 115577183 1 2 303 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 55.09 100 0 0 1 NA Whitelist ESAD-UK 0.68 0.01 0 0 0.64 1 No ESAD-UK OCCAMS-RS-008 ESAD 0.19 2.9 Eso-AdenoCA NA 4 0.01 NA 52 ESAD-UK DO50367 OCCAMS-RS-008 male alive C15.5 no treatment 51 724 724 Current reformed smoker, duration not specified 18 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 23.82 ESAD-UK::OCCAMS-RS-014 1 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 2 NA NA 0 0 39 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 3 49927544 66495197 1 2 39 0 2 0 0 0 0.11 1 3 NA 0 NA NA NA 4 3 4 29.57 44.34 52.58 0 1 3 Whitelist ESAD-UK 0.54 1 NA 0 0.48 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 4 0.05 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 4 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 5 119607382 158452500 3 4 39 1 1 0 1 1 0.8 0.1 2 0 0 NA NA NA NA NA NA 29.57 0 99.88 0 0 2 Whitelist ESAD-UK 1 0.26 0 0 0.84 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 7 0.09 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 6 32766890 154017916 1 4 39 0 0 1 1 2 0.57 0.01 8 0 0 8 4 6 16 4 6 29.57 67.76 29.38 0 2 1 Whitelist ESAD-UK 0.62 0.04 0 0 0.64 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 6 0.08 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 8 NA NA 0 0 39 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.69 NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 9 5402296 32218279 5 9 39 1 0 3 1 4 0.28 0 1 0 0 NA NA NA NA NA NA 29.57 0.12 97.3 1 2 NA Whitelist ESAD-UK 0.97 0 0 0 0.59 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 14 0.18 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 10 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 11 61325065 100852547 6 6 39 2 0 3 1 0 0.34 0 7 0 0 7 0 4 11 3 5 29.57 48.02 51.76 0 2 1 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 12 0.15 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 12 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 16 18095740 27835310 1 1 39 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 29.57 3.94 95.56 0 2 NA Whitelist ESAD-UK 0.62 0.52 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 2 0.03 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 17 NA NA 0 0 39 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.53 NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 22 NA NA 0 0 39 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.62 NA NA NA 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-014 X 31651549 143482457 1 6 39 2 0 0 1 3 0.3 0 1 0 0 NA NA NA NA NA NA 29.57 100 0 0 1 NA Whitelist ESAD-UK 0.68 0.02 0 0 0.59 0 No ESAD-UK OCCAMS-RS-014 ESAD 0.97 1.75 Eso-AdenoCA NA 9 0.12 frameshift_deletion,17_7577086_-_TG,CN:2 2 ESAD-UK DO50370 OCCAMS-RS-014 male alive C15.5 no treatment 71 697 697 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 22.93 ESAD-UK::OCCAMS-RS-022 1 NA NA 0 0 85 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.2 NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 2 205615091 205625691 1 1 85 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 23.58 0 99.89 0 2 NA Whitelist ESAD-UK 0.62 0.3 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 3 18949802 79305129 1 4 85 1 2 0 1 0 0.57 0.02 3 0 0 NA NA NA 6 3 4 23.58 49.72 50.16 0 2 4 Whitelist ESAD-UK 0.68 0.07 0 0 0.64 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 4 121810579 122711384 3 3 85 1 0 1 1 0 0.8 0.51 5 0 0 5 3 3 10 5 5 23.58 30.4 67.23 2 1 2 Whitelist ESAD-UK 0.87 0.76 0 0 0.84 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 5 94099967 133119651 1 3 85 1 2 0 0 0 0.3 0.66 4 0 0 4 3 4 5 3 3 23.58 0.06 99.82 0 2 1 Whitelist ESAD-UK 0.62 0.86 0 0 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 6 156600645 156941373 1 2 85 1 0 0 1 0 0.57 0.82 1 0 0 NA NA NA NA NA NA 23.58 0.12 99.73 0 2 NA Whitelist ESAD-UK 0.68 0.96 0 0 0.64 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 7 139653850 142108462 3 5 85 1 1 0 1 2 0.8 0 7 0 0 7 0 6 26 9 9 23.58 55.62 41.82 1 2 4 Whitelist ESAD-UK 0.68 0 0 0 0.84 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 8 27432704 141047124 1 6 85 2 2 0 0 2 0.26 0.08 5 0 0 5 5 5 5 5 5 23.58 0.14 99.85 0 2 1 Whitelist ESAD-UK 0.54 0.23 0 0 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 9 NA NA 0 0 85 0 0 0 0 0 NA 0.39 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.64 0 NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 10 62430511 62510880 1 1 85 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 3 3 23.58 0.12 99.74 0 2 3 Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 11 108888421 117220502 1 1 85 0 0 1 0 0 0.39 1 1 0 NA NA NA NA 6 3 3 23.58 2.49 97.08 0 2 NA Whitelist ESAD-UK 0.62 1 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 12 NA NA 0 0 85 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.41 NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 13 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 14 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 15 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 16 72187554 78827526 1 4 85 4 0 0 0 0 0.01 0.08 8 0 0 8 4 8 9 4 4 23.58 0.82 99.08 0 1 2 Whitelist ESAD-UK 0.21 0.22 0 0 0.16 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 17 46670869 46766432 1 1 85 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.58 17.41 82.58 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 18 2643923 58965491 1 9 85 2 2 0 0 5 0.26 0 15 0 0 15 3 10 15 3 3 23.58 94.79 0.55 4 1 4 Whitelist ESAD-UK 0.97 0 0 0 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 13 0.08 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 19 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 20 14655679 14684720 1 1 85 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 4 0 4 23.58 0.07 99.64 0 1 3 Whitelist ESAD-UK 0.62 0.68 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 21 17133089 33096058 1 2 85 0 0 0 1 1 0.39 0.09 3 NA NA NA NA NA 5 0 3 23.58 40.23 37.12 0 1 2 Whitelist ESAD-UK 0.68 0.24 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 22 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-022 X 7331989 138710533 1 5 85 2 1 0 0 2 0.3 0.33 1 0 0 NA NA NA NA NA NA 23.58 100 0 0 1 NA Whitelist ESAD-UK 0.93 0.58 0 0 0.59 0 No ESAD-UK OCCAMS-RS-022 ESAD 0.56 1.92 Eso-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578526_T_C,CN:1 2 ESAD-UK DO50372 OCCAMS-RS-022 male alive C15.5 no treatment 63 572 572 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 18.82 ESAD-UK::OCCAMS-RS-024 1 4691246 246501401 1 8 218 4 1 1 0 2 0.11 0.08 12 0 0 12 6 8 12 6 6 64.36 100 0 1 4 3 Whitelist ESAD-UK 4 0.62 0.22 0 0 0.48 1 Linked to high confidence ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA With other complex events 14 0.03 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 2 105994075 107895376 2 2 218 0 0 1 1 0 0.57 0 4 0 0 4 4 4 29 8 17 64.36 49.11 48.18 0 3 5 Whitelist ESAD-UK 0.68 0.02 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA After polyploidization 4 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 3 60443621 60801398 2 2 218 2 0 0 0 0 0.11 0.08 6 0 0 6 5 6 24 12 12 64.36 52.17 47.71 0 1 0 Whitelist ESAD-UK 0.54 0.24 0 0 0.48 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 4 15222955 60346330 12 36 218 2 3 3 4 24 0.88 0 28 0 0 28 8 15 32 8 12 64.36 55.42 44.56 0 2 3 Whitelist ESAD-UK 2_5 0.68 0 0 0 0.91 1 High confidence ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA With other complex events 48 0.11 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 5 61100033 179629173 6 16 218 1 2 1 2 10 0.88 0.02 11 0 0 11 8 11 14 8 8 64.36 78.57 18.74 1 3 2 Whitelist ESAD-UK 2_4 0.95 0.07 0 0 0.91 1 High confidence ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA Canonical without polyploidization 22 0.05 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 6 25446399 46884105 7 9 218 3 1 1 2 2 0.67 0 11 0 0 11 3 4 42 4 7 64.36 45.82 51.35 0 4 1 Whitelist ESAD-UK 0.85 0.01 0 0 0.74 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 16 0.04 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 7 49203817 91197528 4 7 218 0 1 1 2 3 0.57 0 8 0 0 8 3 6 31 7 9 64.36 95.68 4.09 5 5 3 Whitelist ESAD-UK 2 0.77 0 0 0 0.64 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 11 0.03 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 8 NA NA 0 0 218 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 11 6 9 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.31 0 NA NA 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 9 97201514 97331115 1 1 218 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 7 3 3 64.36 26.5 72.8 0 1 2 Whitelist ESAD-UK 0.62 0.36 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 10 NA NA 0 0 218 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 0 NA NA 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 11 37071163 37511156 2 3 218 0 0 1 1 1 0.57 0 5 0 0 5 3 5 23 5 5 64.36 53.65 42.88 0 5 3 Whitelist ESAD-UK 0.62 0.01 0 0 0.64 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 5 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 12 20415863 38535911 3 3 218 1 0 2 0 0 0.3 0.15 3 0 0 NA NA NA 17 6 7 64.36 97.8 2.12 0 3 2 Whitelist ESAD-UK 0.62 0.34 0 0 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 13 107186457 107399750 1 1 218 0 1 0 0 0 0.39 0.26 2 0 NA NA NA NA 7 3 3 64.36 100 0 1 4 5 Whitelist ESAD-UK 0.62 0.5 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 14 38010533 38457311 1 1 218 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 7 3 4 64.36 82.48 1.61 0 2 3 Whitelist ESAD-UK 0.62 0.07 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 15 33199669 33210981 1 1 218 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 7 6 6 64.36 95.12 0 0 3 4 Whitelist ESAD-UK 0.62 0.97 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 16 72949124 73056293 2 2 218 1 1 0 0 0 0.57 0.83 3 0 0 NA NA NA 13 4 6 64.36 95.36 0.12 0 1 3 Whitelist ESAD-UK 0.68 0.97 0 0 0.64 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 17 61124227 61328087 1 1 218 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 4 64.36 68.22 27.31 0 3 4 Whitelist ESAD-UK 0.62 0.12 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 18 20072934 22080311 1 3 218 0 1 0 0 2 0.39 1 3 0 0 NA NA NA 8 3 4 64.36 93.74 0.57 0 3 4 Whitelist ESAD-UK 0.87 1 0 0 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 19 16694347 23951422 1 2 218 2 0 0 0 0 0.11 0.62 3 0 0 NA NA NA 7 4 6 64.36 99.62 0.21 0 4 3 Whitelist ESAD-UK 0.54 0.84 0 0 0.48 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 20 14981605 15105229 1 1 218 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 7 5 5 64.36 92.81 0 0 1 3 Whitelist ESAD-UK 0.62 0.11 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 21 9851640 9863994 1 1 218 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 64.36 0.25 68.37 0 1 NA Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 22 NA NA 0 0 218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-024 X 19610322 31848393 1 4 218 3 0 0 0 1 0.03 0.64 1 0 0 NA NA NA 6 6 6 64.36 33.25 66.75 0 1 NA Whitelist ESAD-UK 0.54 0.85 0 0 0.33 1 No ESAD-UK OCCAMS-RS-024 ESAD 0.71 2.93 Eso-AdenoCA NA 7 0.02 frameshift_deletion,17_7579443_-_GTGT,CN:2 4 ESAD-UK DO50374 OCCAMS-RS-024 male deceased C15.5 no treatment 50 409 409 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 13.45 ESAD-UK::OCCAMS-RS-027 1 2485325 246001709 1 6 175 3 0 2 1 0 0.34 0.05 13 0 0 13 5 6 13 5 7 47.05 61.59 38.41 0 2 4 Whitelist ESAD-UK 0.62 0.16 0 0 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 2 134303428 142229738 1 2 175 2 0 0 0 0 0.11 0.58 4 0 0 4 4 4 5 5 5 47.05 99.66 0.24 0 2 3 Whitelist ESAD-UK 0.54 0.81 0 0 0.48 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 3 4254522 60702717 1 3 175 3 0 0 0 0 0.03 0.3 6 0 0 6 4 6 11 5 11 47.05 0.34 99.52 0 2 1 Whitelist ESAD-UK 0.41 0.54 0 0 0.33 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 4 NA NA 0 0 175 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.39 0 NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 5 101123095 101136699 2 2 175 1 1 0 0 0 0.57 0.16 3 0 0 NA NA NA 7 5 7 47.05 0.02 99.85 0 2 1 Whitelist ESAD-UK 0.68 0.36 0 0 0.64 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 6 1871406 148864267 1 4 175 3 1 0 0 0 0.11 1 8 0 0 8 3 7 9 3 5 47.05 99.78 0.07 10 3 2 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 7 13612693 13694805 3 3 175 1 0 1 1 0 0.8 0.13 3 0 0 NA NA NA 11 4 5 47.05 99.67 0.08 0 4 5 Whitelist ESAD-UK 0.87 0.32 0 0 0.84 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 8 98053148 109826904 1 2 175 2 0 0 0 0 0.11 0.61 1 0 0 NA NA NA 4 3 4 47.05 98.74 1.26 0 3 NA Whitelist ESAD-UK 0.54 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 9 68361385 105066281 1 2 175 0 1 0 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 47.05 50.89 48.38 0 3 NA Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 10 68201529 68624309 1 2 175 2 0 0 0 0 0.11 1 4 0 0 4 3 4 5 3 3 47.05 99.83 0 0 1 0 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 11 34676740 122412481 1 6 175 1 0 0 1 4 0.57 0.01 8 0 0 8 3 4 11 3 4 47.05 99.47 0.1 0 4 2 Whitelist ESAD-UK 0.62 0.03 0 0 0.64 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 12 80710441 84944484 2 2 175 1 1 0 0 0 0.57 0.59 2 0 0 NA NA NA NA NA NA 47.05 3.15 96.84 0 1 2 Whitelist ESAD-UK 0.68 0.81 0 0 0.64 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 13 48008922 48076281 1 1 175 1 0 0 0 0 0.39 0.1 1 0 NA NA NA NA 6 0 3 47.05 48.42 51.58 0 4 NA Whitelist ESAD-UK 0.62 0.26 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 14 77002056 77035617 1 1 175 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 47.05 0.03 99.05 0 2 3 Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 15 NA NA 0 0 175 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.49 NA NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 16 78594782 78784195 1 1 175 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 47.05 0.21 99.7 0 0 2 Whitelist ESAD-UK 0.62 0.59 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 17 26150752 26170284 1 1 175 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA 8 0 0 47.05 7.43 87 0 12 15 Whitelist ESAD-UK 0.62 0.49 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 18 NA NA 0 0 175 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.96 0 NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 19 NA NA 0 0 175 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.37 0 NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 20 1898754 42484222 1 5 175 2 0 0 1 2 0.3 0 7 0 0 7 3 6 15 3 3 47.05 59.75 33.05 1 2 1 Whitelist ESAD-UK 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 21 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 22 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-027 X 31646670 96838811 1 3 175 3 0 0 0 0 0.03 0.49 6 0 0 6 6 6 7 7 7 47.05 0.33 99.67 0 1 2 Whitelist ESAD-UK 0.41 0.73 0 0 0.33 0 No ESAD-UK OCCAMS-RS-027 ESAD 0.53 2.6 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 ESAD-UK DO50449 OCCAMS-RS-027 male alive C15.5 no treatment 59 637 637 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 20.95 ESAD-UK::OCCAMS-RS-031 1 25946728 245971970 1 8 156 5 1 0 0 2 0.01 0.45 17 0 0 17 4 7 19 4 4 68.61 72.97 23.93 0 5 3 Whitelist ESAD-UK 0.54 0.7 0 0 0.19 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 14 0.04 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 2 77886770 232631698 1 4 156 0 4 0 0 0 0.01 0.08 11 0 0 11 4 9 12 5 10 68.61 97.4 0 0 3 5 Whitelist ESAD-UK 0.21 0.23 0 0 0.16 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 8 0.03 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 3 102654747 189241556 6 11 156 0 1 1 4 5 0.11 0 20 0 0 20 13 13 29 13 15 68.61 68.64 27.91 6 4 5 Whitelist ESAD-UK 4 0.68 0 0 0 0.48 1 High confidence ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA After polyploidization 17 0.05 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 4 8256829 162969786 1 13 156 1 1 1 0 10 0.8 0.01 16 0 0 16 9 15 17 9 15 68.61 9.72 87.71 5 2 3 Whitelist ESAD-UK 0.8 0.05 0 0 0.84 1 Linked to high confidence ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA With other complex events 16 0.05 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 5 59131606 59327940 2 2 156 2 0 0 0 0 0.11 0.14 2 0 0 NA NA NA 10 3 5 68.61 56.28 40.65 0 1 3 Whitelist ESAD-UK 0.54 0.33 0 0 0.48 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 6 135390773 161809631 6 8 156 3 0 1 2 2 0.34 0 7 0 0 7 0 3 14 3 3 68.61 96.92 0 0 5 49 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 14 0.04 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 7 54401392 133433821 1 5 156 1 2 0 0 2 0.3 1 7 0 0 7 3 3 8 3 3 68.61 4.37 92.95 0 2 1 Whitelist ESAD-UK 0.93 1 0 0 0.59 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 8 0.03 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 8 131474367 137775871 2 2 156 0 0 1 1 0 0.57 0.02 5 0 0 5 0 4 31 4 6 68.61 96.34 0 3 6 4 Whitelist ESAD-UK 0.68 0.07 0 0 0.64 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 9 9705582 21979634 1 2 156 2 0 0 0 0 0.11 0.3 5 0.27 0 5 0 3 10 0 4 68.61 99.83 0 0 0 4 Whitelist ESAD-UK 0.54 0.54 0.27 0 0.48 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 10 122892243 123375313 1 1 156 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 0 3 68.61 87.78 8.86 0 2 49 Whitelist ESAD-UK 0.62 0.17 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 11 35068371 60270144 3 5 156 0 1 1 1 2 0.8 0 7 0 0 7 3 3 20 3 3 68.61 99.44 0 0 6 4 Whitelist ESAD-UK 0.62 0 0 0 0.84 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 8 0.03 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 12 NA NA 0 0 156 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.05 NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 13 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 14 25421773 106863854 9 9 156 3 2 2 2 0 0.95 0 19 0 0 19 5 6 22 5 8 68.61 64.51 20.37 19 3 4 Whitelist ESAD-UK 0.97 0 0 0 0.97 1 Low confidence ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA With other complex events 18 0.06 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 15 26522064 26540167 1 1 156 0 1 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 68.61 79.81 0 0 3 NA Whitelist ESAD-UK 0.62 0.95 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 16 78141561 78834596 1 5 156 5 0 0 0 0 0 0.07 6 0 0 6 3 3 11 3 5 68.61 79.01 16.47 0 3 0 Whitelist ESAD-UK 0.1 0.22 0 0 0.07 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 10 0.03 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 17 42177882 44231657 1 2 156 1 1 0 0 0 0.57 0.8 5 NA 0 5 0 5 8 0 6 68.61 95.56 0 0 3 4 Whitelist ESAD-UK 0.68 0.95 NA 0 0.64 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 18 22989586 25268249 1 1 156 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 68.61 70.56 29.41 0 1 NA Whitelist ESAD-UK 0.62 0.7 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 19 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 20 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 21 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 22 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-031 X 7318328 32261031 1 3 156 3 0 0 0 0 0.03 0.2 NA 0 0 NA NA NA NA NA NA 68.61 0 0 0 0 0 Whitelist ESAD-UK 0.41 0.42 0 0 0.33 1 No ESAD-UK OCCAMS-RS-031 ESAD 0.4 3.7 Eso-AdenoCA NA 6 0.02 NA 3 ESAD-UK DO50381 OCCAMS-RS-031 male deceased C15.5 no treatment 58 399 399 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 13.12 ESAD-UK::OCCAMS-RS-032 1 53896920 220849324 1 6 159 1 2 0 1 2 0.57 0.24 5 0 0 5 5 5 5 5 5 16.84 0.07 99.93 0 2 3 Whitelist ESAD-UK 3 0.93 0.47 0 0 0.64 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 10 0.03 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 2 14640456 230813194 1 6 159 6 0 0 0 0 0 0.03 9 0 0 9 3 5 10 3 5 16.84 0.28 99.62 0 2 1 Whitelist ESAD-UK 0.04 0.12 0 0 0.03 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 12 0.04 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 3 6793668 181259419 4 19 159 4 3 0 1 11 0.17 0 25 0 0 25 7 17 26 7 7 16.84 42.07 57.88 0 2 3 Whitelist ESAD-UK 1_9 0.93 0 0 0 0.59 0 Linked to high confidence ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA With other complex events 27 0.08 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 False positive; manually removed ESAD-UK::OCCAMS-RS-032 4 91195501 91999753 2 2 159 2 0 0 0 0 0.11 1 1 0 0 NA NA NA 8 6 6 16.84 0.95 99.02 0 2 NA Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 5 21645067 104326690 1 7 159 7 0 0 0 0 0 0.51 14 0 0 14 14 14 16 15 15 16.84 7.27 92.62 0 1 2 Whitelist ESAD-UK 0.02 0.75 0 0 0.01 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 14 0.04 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 6 1982823 147908753 1 5 159 3 1 0 0 1 0.11 0.18 11 0 0 11 5 10 12 5 5 16.84 17.81 81.93 0 2 1 Whitelist ESAD-UK 0.62 0.39 0 0 0.48 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 9 0.03 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 7 110439559 110675041 2 2 159 2 0 0 0 0 0.11 0.86 2 0 0 NA NA NA 15 13 13 16.84 0.95 98.82 0 1 2 Whitelist ESAD-UK 0.54 0.99 0 0 0.48 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 8 32815344 128323684 1 8 159 3 1 0 1 3 0.28 1 10 0 0 10 8 10 11 8 8 16.84 79.03 20.97 0 3 2 Whitelist ESAD-UK 9 0.87 1 0 0 0.59 0 Linked to high confidence ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA Canonical without polyploidization 13 0.04 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 9 15830088 125695294 10 22 159 3 2 2 3 12 0.94 0 25 0 0 25 10 24 29 10 27 16.84 49.48 50.39 0 1 2 Whitelist ESAD-UK 3_8 0.89 0 0 0 0.96 0 High confidence ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA With other complex events 32 0.1 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 10 21452012 111733905 1 2 159 2 0 0 0 0 0.11 0.26 1 0 0 NA NA NA NA NA NA 16.84 0 99.82 0 2 NA Whitelist ESAD-UK 0.54 0.5 0 0 0.48 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 11 28632043 99708134 1 3 159 3 0 0 0 0 0.03 0.26 6 0 0 6 6 6 8 8 8 16.84 0.35 99.25 0 1 2 Whitelist ESAD-UK 0.41 0.5 0 0 0.33 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 12 NA NA 0 0 159 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 13 51290434 51390138 1 1 159 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 16.84 0.09 99.91 0 1 2 Whitelist ESAD-UK 0.62 0.16 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 14 43824726 100802517 1 4 159 3 1 0 0 0 0.11 0.82 6 0 0 6 4 6 7 5 5 16.84 0.3 98.79 0 2 1 Whitelist ESAD-UK 0.54 0.96 0 0 0.48 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 8 0.03 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 15 NA NA 0 0 159 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 16 78589881 78779444 3 3 159 3 0 0 0 0 0.03 0 7 0 0 7 6 7 20 6 7 16.84 0.43 99.47 0 0 1 Whitelist ESAD-UK 0.41 0 0 0 0.33 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 17 44165770 60178460 1 4 159 1 1 0 0 2 0.57 0.33 3 0 0 NA NA NA 6 3 3 16.84 44.26 55.74 0 3 2 Whitelist ESAD-UK 0.62 0.58 0 0 0.64 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 18 NA NA 0 0 159 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.7 NA NA NA 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 19 899916 54167464 4 4 159 2 1 0 1 0 0.57 0 10 0 0 10 5 6 11 5 5 16.84 24.84 74.97 0 2 1 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 8 0.03 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 20 14628310 15443844 3 3 159 3 0 0 0 0 0.03 0.4 4 0 0 4 3 4 7 4 4 16.84 1.36 97.65 0 1 0 Whitelist ESAD-UK 0.41 0.65 0 0 0.33 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 21 45181116 45296900 1 1 159 0 1 0 0 0 0.39 0.13 2 0 NA NA NA NA 4 3 3 16.84 7.3 70.05 0 2 3 Whitelist ESAD-UK 0.62 0.32 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 22 34283607 34295488 1 1 159 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 16.84 0 100 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-032 X 6866326 141051977 1 10 159 9 1 0 0 0 0 0.47 3 0 0 NA NA NA NA NA NA 16.84 99.97 0.03 0 1 2 Whitelist ESAD-UK 0.01 0.71 0 0 0.01 0 No ESAD-UK OCCAMS-RS-032 ESAD 0.61 1.96 Eso-AdenoCA NA 20 0.06 NA 2 ESAD-UK DO50382 OCCAMS-RS-032 male deceased C15.5 no treatment 74 581 581 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 19.11 ESAD-UK::OCCAMS-RS-035 1 183931970 188142389 1 3 179 0 1 1 0 1 0.57 0.33 7 0 0 7 0 5 9 3 5 36.26 27.9 72.1 0 3 4 Whitelist ESAD-UK 0.87 0.58 0 0 0.64 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 2 71904503 171823352 1 6 179 0 0 0 1 5 0.39 0.28 10 0 0 10 0 7 10 0 3 36.26 50.85 49.04 0 2 3 Whitelist ESAD-UK 0.54 0.52 0 0 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 3 54685779 121737677 2 6 179 2 0 1 1 2 0.57 0.66 14 0 0 14 6 14 20 6 6 36.26 16.64 80.29 2 2 1 Whitelist ESAD-UK 0.93 0.87 0 0 0.64 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 4 NA NA 0 0 179 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.39 0 NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 5 17207429 52593173 3 4 179 0 2 1 0 1 0.3 1 3 0 0 NA NA NA 5 3 3 36.26 0.29 99.58 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 6 NA NA 0 0 179 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 0 NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 7 13714434 13726778 1 1 179 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 5 5 5 36.26 99.77 0.01 0 2 3 Whitelist ESAD-UK 0.62 0.08 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 8 145588120 145615071 1 1 179 1 0 0 0 0 0.39 0.73 1 0 NA NA NA NA 8 5 6 36.26 85.11 10.93 0 4 NA Whitelist ESAD-UK 0.62 0.91 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 9 NA NA 0 0 179 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.98 0 NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 10 NA NA 0 0 179 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.36 NA NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 11 NA NA 0 0 179 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.81 0 NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 12 23575673 24947881 1 1 179 1 0 0 0 0 0.39 0.29 2 0.02 NA NA NA NA 4 4 4 36.26 23.77 72.49 0 2 3 Whitelist ESAD-UK 0.62 0.53 0.03 NA 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 13 24973443 83476886 1 9 179 2 0 0 0 7 0.11 0.01 1 0 0 NA NA NA 4 4 4 36.26 100 0 2 3 NA Whitelist ESAD-UK 0.62 0.03 0 0 0.48 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 14 NA NA 0 0 179 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 15 20865968 27307552 1 1 179 0 0 1 0 0 0.39 0.5 2 NA NA NA NA NA 6 3 3 36.26 32.66 62.43 0 2 3 Whitelist ESAD-UK 0.62 0.74 NA NA 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 16 65319784 65359499 3 3 179 0 1 1 1 0 0.8 0.49 4 0 0 4 4 4 12 5 5 36.26 16.53 83.15 0 1 2 Whitelist ESAD-UK 0.87 0.73 0 0 0.84 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 17 5730458 5768817 1 1 179 0 1 0 0 0 0.39 0.35 1 0 NA NA NA NA NA NA NA 36.26 8.87 91.11 0 2 NA Whitelist ESAD-UK 0.62 0.6 0 NA 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 18 27169297 71273272 2 4 179 0 0 2 2 0 0.26 0.06 3 0 0 NA NA NA 7 5 7 36.26 93.43 1.93 2 1 3 Whitelist ESAD-UK 0.62 0.19 0 0 0.59 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 19 11042941 47085334 1 6 179 2 1 1 0 2 0.57 0 12 0 0 12 6 6 19 6 6 36.26 87.88 4.76 3 3 4 Whitelist ESAD-UK 0.62 0 0 0 0.64 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 20 10433007 22586479 43 44 179 8 10 13 12 1 0.71 0 26 0 0 26 3 5 32 3 4 36.26 79.02 13.99 4 3 2 Whitelist ESAD-UK 0.76 0 0 0 0.79 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 87 0.24 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 21 18259266 36405750 1 2 179 1 1 0 0 0 0.57 1 4 NA 0 4 0 3 6 3 3 36.26 33.1 37.19 0 3 1 Whitelist ESAD-UK 0.68 1 NA 0 0.64 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 22 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-035 X NA NA 0 0 179 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.25 NA NA NA 0 No ESAD-UK OCCAMS-RS-035 ESAD 0.64 2.27 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 2 ESAD-UK DO50383 OCCAMS-RS-035 male deceased C15.5 no treatment 75 390 390 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 12.83 ESAD-UK::OCCAMS-RS-036 1 156154216 245582056 1 7 332 3 2 0 0 2 0.14 0 8 0 0 8 3 5 10 3 3 29.68 42.75 57.25 2 3 1 Whitelist ESAD-UK 0.54 0 0 0 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 2 86732568 164816492 1 3 332 1 2 0 0 0 0.3 0 3 0 0 NA NA NA 5 5 5 29.68 0.05 99.85 1 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 3 1771501 195103360 1 10 332 6 2 0 1 1 0.03 0.05 9 0 0 9 5 9 11 7 11 29.68 0.85 99.1 4 2 1 Whitelist ESAD-UK 0.47 0.17 0 0 0.33 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 4 91851630 92346657 1 2 332 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 29.68 0.07 99.91 1 2 1 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 5 52934089 180192620 17 17 332 3 3 6 5 0 0.66 0 37 0 0 37 7 11 52 7 9 29.68 81.19 18.69 4 2 1 Whitelist ESAD-UK 0.77 0.01 0 0 0.74 1 High confidence ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA With other complex events 34 0.05 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 6 21253841 37788089 1 2 332 0 2 0 0 0 0.11 0.04 2 0 0 NA NA NA NA NA NA 29.68 0.06 99.79 0 2 3 Whitelist ESAD-UK 0.54 0.13 0 0 0.48 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 7 64215073 79345030 2 9 332 0 1 0 1 7 0.57 0.72 8 0 0 8 8 8 16 10 10 29.68 45.42 54.5 0 2 3 Whitelist ESAD-UK 0.97 0.9 0 0 0.64 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 8 62509981 73849640 5 7 332 1 1 1 2 2 0.9 0 6 0 0 6 4 6 18 8 10 29.68 49.87 50.12 3 3 4 Whitelist ESAD-UK 7 0.96 0.01 0 0 0.92 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 9 82647126 121561549 1 11 332 3 0 0 1 7 0.11 0.78 6 0 0 6 6 6 10 7 7 29.68 66.92 32.38 0 2 3 Whitelist ESAD-UK 13 0.62 0.93 0 0 0.48 1 Linked to high confidence ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA Canonical without polyploidization 15 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 10 52883395 53012366 1 1 332 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 3 29.68 4.2 95.64 0 1 2 Whitelist ESAD-UK 0.62 0.02 0 NA 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 11 56550224 56763412 4 5 332 1 1 2 0 1 0.57 0.9 3 0 0 NA NA NA 7 6 7 29.68 82.91 16.53 1 3 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 12 50432636 93465799 2 5 332 0 2 0 0 3 0.11 0.3 7 0 0 7 5 7 11 5 5 29.68 41.89 54.37 1 3 4 Whitelist ESAD-UK 5 0.62 0.54 0 0 0.48 1 Linked to high confidence ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA After polyploidization 7 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 13 19096905 108942210 28 36 332 7 6 5 10 8 0.57 0 41 0 0 41 8 11 41 8 11 29.68 48.78 51.22 0 2 1 Whitelist ESAD-UK 9 0.93 0 0 0 0.64 1 High confidence ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA With other complex events 64 0.1 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 14 65112911 67934434 1 2 332 0 2 0 0 0 0.11 0.02 4 0 0 4 4 4 5 5 5 29.68 0.27 98.82 0 2 3 Whitelist ESAD-UK 0.54 0.07 0 0 0.48 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 15 59603350 59756639 3 3 332 0 1 1 1 0 0.8 0.4 3 0 0 NA NA NA 6 6 6 29.68 29.49 70.51 0 2 3 Whitelist ESAD-UK 0.87 0.65 0 0 0.84 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 16 72259545 78812138 1 6 332 5 1 0 0 0 0.01 0.09 11 0 0 11 6 11 11 6 6 29.68 0.41 99.5 1 1 2 Whitelist ESAD-UK 0.25 0.24 0 0 0.19 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 17 38588621 39990043 78 79 332 18 18 19 23 1 0.83 0 30 0 0 30 4 7 36 4 5 29.68 1.79 98.21 0 29 26 Whitelist ESAD-UK 0.85 0 0 0 0.87 1 Low confidence ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA With other complex events 157 0.24 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 18 25062208 25306494 1 1 332 0 0 1 0 0 0.39 0.04 3 NA NA NA NA NA 5 5 5 29.68 53.63 46.33 0 1 2 Whitelist ESAD-UK 0.62 0.14 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 19 10910302 11039076 1 1 332 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA 4 3 3 29.68 92.4 0.32 0 3 NA Whitelist ESAD-UK 0.62 0.1 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 20 14721618 15202683 5 5 332 5 0 0 0 0 0 0.08 3 0 0 NA NA NA 12 5 7 29.68 97.51 1.52 0 1 2 Whitelist ESAD-UK 0.1 0.24 0 0 0.07 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 21 36206072 36253644 1 1 332 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA 4 4 4 29.68 29.81 47.54 1 2 3 Whitelist ESAD-UK 0.62 0.7 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 22 40617350 40649570 1 1 332 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 29.68 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.42 NA NA 0.59 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-036 X 6664633 7888238 2 4 332 3 0 0 1 0 0.11 0.1 10 0 0 10 5 10 15 5 6 29.68 0.77 99.23 0 1 2 Whitelist ESAD-UK 0.54 0.27 0 0 0.48 1 No ESAD-UK OCCAMS-RS-036 ESAD 0.73 2.22 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577111_T_G,CN:2 3 ESAD-UK DO50384 OCCAMS-RS-036 male alive C15.5 no treatment 82 536 536 Current reformed smoker, duration not specified 36 yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 17.63 ESAD-UK::OCCAMS-RS-047 1 23826407 235519806 6 62 894 1 5 0 0 56 0.01 0 101 0 0 101 8 27 131 12 12 21.74 40.34 59.65 0 3 2 Whitelist ESAD-UK 11_18_3_5 0.97 0 0 0 0.19 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 68 0.04 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 2 43059538 85800999 2 6 894 1 1 0 0 4 0.57 0 18 0 0 18 11 15 55 11 11 21.74 4.02 95.88 0 2 3 Whitelist ESAD-UK 18 0.68 0 0 0 0.64 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA Canonical without polyploidization 8 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 3 57769950 184424438 4 15 894 0 2 1 1 11 0.57 0.07 39 0 0 39 7 23 72 8 13 21.74 48.93 50.93 0 3 2 Whitelist ESAD-UK 1_12_17_4 0.93 0.2 0 0 0.64 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 19 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 False positive; manually removed ESAD-UK::OCCAMS-RS-047 4 6718600 185350690 1 20 894 4 9 0 0 7 0 0 16 0 0 16 12 16 23 14 14 21.74 0.94 98.86 0 2 3 Whitelist ESAD-UK 12_3 0.21 0 0 0 0.04 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 33 0.02 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 5 32316033 176769548 1 46 894 3 15 0 0 28 0 0.53 35 0 0 35 12 23 36 12 12 21.74 2.32 97.54 1 2 3 Whitelist ESAD-UK 1_11_9 0.34 0.77 0 0 0 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 64 0.04 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 6 41252622 127972764 2 14 894 0 4 1 1 8 0.11 0.83 30 0 0 30 9 9 52 10 14 21.74 2.92 96.93 0 3 2 Whitelist ESAD-UK 17 0.81 0.97 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 20 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 7 2419985 151823993 2 21 894 0 6 0 0 15 0 0.21 27 0 0 27 7 7 31 9 9 21.74 29.24 70.56 0 2 3 Whitelist ESAD-UK 11_14_6_X 0.62 0.43 0 0 0.03 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 27 0.02 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 8 28471814 42053635 3 3 894 0 0 2 1 0 0.3 0.22 7 0 0 7 7 7 47 12 16 21.74 4.63 95.18 0 2 3 Whitelist ESAD-UK 0.62 0.46 0 0 0.59 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 6 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 9 9115867 9827916 2 2 894 2 0 0 0 0 0.11 0.3 7 0 0 7 6 7 29 18 18 21.74 3.43 96.44 0 0 1 Whitelist ESAD-UK 0.54 0.55 0 0 0.48 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 4 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 10 120191814 121113207 2 4 894 0 2 0 0 2 0.11 0.63 4 0 0 4 3 4 46 7 15 21.74 97.53 2.29 0 4 3 Whitelist ESAD-UK 0.68 0.84 0 0 0.48 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 6 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 11 66812374 111289396 3 35 894 1 2 0 0 32 0.3 0 31 0 0 31 5 6 44 6 8 21.74 3.14 96.66 0 2 3 Whitelist ESAD-UK 1_12_18_4_5 0.98 0 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 38 0.02 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 12 56993350 123682992 2 9 894 0 1 1 0 7 0.57 0 22 0 0 22 8 18 61 11 22 21.74 15.24 84.74 0 3 2 Whitelist ESAD-UK 1_17_3 0.97 0 0 0 0.64 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 11 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 13 50359017 97835200 1 6 894 1 4 0 1 0 0.11 0 6 0 0 6 5 6 9 5 5 21.74 0.82 99.18 0 2 3 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 12 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 14 21444972 103597907 3 20 894 0 3 0 0 17 0.03 0.07 35 0 0 35 9 17 38 9 9 21.74 4.5 91.79 0 2 3 Whitelist ESAD-UK 11_6_7_8_9 0.86 0.2 0 0 0.33 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 23 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 False positive; manually removed ESAD-UK::OCCAMS-RS-047 15 40224068 90935523 3 11 894 0 0 1 2 8 0.3 0.48 24 0 0 24 11 11 29 11 11 21.74 59.88 40.12 0 2 3 Whitelist ESAD-UK 18 0.62 0.72 0 0 0.59 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 14 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 False positive; manually removed ESAD-UK::OCCAMS-RS-047 16 11524065 11923536 2 4 894 0 1 0 1 2 0.57 0 2 0 0 NA NA NA 37 11 13 21.74 3.84 96.06 0 2 3 Whitelist ESAD-UK 0.68 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 6 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 17 37640778 73863270 9 48 894 0 6 1 2 39 0.03 0 39 0 0 39 6 8 66 10 11 21.74 10.28 84.34 0 3 2 Whitelist ESAD-UK 1_11_12_2_5_6 0.62 0 0 0 0.33 0 Low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 57 0.03 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 18 19478394 72412983 1 21 894 1 9 0 0 11 0 0.3 17 0 0 17 13 14 23 13 13 21.74 3.15 91.71 0 2 3 Whitelist ESAD-UK 15_2_X 0.02 0.55 0 0 0.01 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 31 0.02 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 19 795537 1446623 4 6 894 2 2 0 0 2 0.26 0 4 0 0 4 0 3 45 12 12 21.74 6.23 93.6 0 3 4 Whitelist ESAD-UK 17 0.93 0 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA With other complex events 10 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 20 17283432 18053766 3 3 894 0 3 0 0 0 0.03 0 2 0 0 NA NA NA 48 9 9 21.74 7.59 91.34 0 2 3 Whitelist ESAD-UK 0.41 0 0 0 0.33 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 6 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 21 44937170 46176566 3 3 894 0 3 0 0 0 0.03 1 4 0 0 4 3 4 13 10 10 21.74 2.92 74.43 0 3 2 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 6 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 22 43234468 43677891 2 2 894 1 1 0 0 0 0.57 0 4 0 0 4 3 4 36 16 16 21.74 5.49 93.83 0 2 1 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 4 0 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-RS-047 X 7262027 96789437 1 13 894 6 2 0 0 5 0.01 0 7 0 0 7 7 7 7 7 7 21.74 99.58 0.42 0 1 2 Whitelist ESAD-UK 18_7 0.41 0 0 0 0.16 0 No ESAD-UK OCCAMS-RS-047 ESAD 0.48 2.04 Eso-AdenoCA NA 21 0.01 NA 0 ESAD-UK DO50452 OCCAMS-RS-047 male alive C15.5 no treatment 61 475 475 Current smoker (includes daily smokers non-daily/occasional smokers) 75 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 15.62 ESAD-UK::OCCAMS-SH-003 1 4704784 246526219 1 8 250 3 2 0 1 2 0.34 0.02 21 0 0 21 6 12 22 6 6 82.7 96.79 0.09 1 4 5 Whitelist ESAD-UK 0.87 0.08 0 0 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 2 15436129 188721021 1 13 250 3 2 0 1 7 0.34 0.07 17 0 0 17 3 11 18 3 11 82.7 72.39 27.51 2 2 3 Whitelist ESAD-UK 0.62 0.2 0 0 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 3 60224665 174891921 1 6 250 4 1 0 0 1 0.04 0.01 11 0 0 11 6 6 12 7 9 82.7 99.83 0.14 0 3 2 Whitelist ESAD-UK 0.54 0.03 0 0 0.36 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 4 275582 134176401 1 10 250 2 4 0 1 3 0.17 0.8 23 0 0 23 4 4 24 4 4 82.7 92.47 7.27 0 3 7 Whitelist ESAD-UK 11 0.62 0.95 0 0 0.59 1 Linked to low confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 17 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 5 87306020 130152853 2 15 250 0 1 1 0 13 0.57 0 13 0 0 13 5 9 26 5 7 82.7 75.01 22.33 0 2 4 Whitelist ESAD-UK 9 0.85 0 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 17 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 6 97542986 97555119 1 1 250 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 5 3 3 82.7 99.86 0 0 3 NA Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 7 27157644 47197856 4 4 250 0 1 1 2 0 0.57 0.4 14 0 0 14 4 9 20 4 9 82.7 97.45 0 0 6 7 Whitelist ESAD-UK 0.68 0.65 0 0 0.64 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 8 20518764 105769839 1 4 250 1 1 1 0 1 0.8 0.11 6 0 0 6 0 4 12 5 5 82.7 77.81 22.18 0 5 6 Whitelist ESAD-UK 0.68 0.29 0 0 0.84 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 9 7402627 123306880 43 67 250 12 14 8 9 24 0.55 0 56 0 0 56 31 31 56 31 31 82.7 83.44 15.86 0 3 2 Whitelist ESAD-UK 0.89 0 0 0 0.64 1 High confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 110 0.22 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 10 36101656 116130115 1 3 250 1 0 1 1 0 0.8 0.05 5 0 0 5 3 5 6 3 3 82.7 99.82 0 0 4 1 Whitelist ESAD-UK 0.87 0.16 0 0 0.84 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 11 76719544 87065454 11 12 250 2 5 1 3 1 0.36 0 21 0 0 21 5 5 53 5 5 82.7 93.31 2.79 0 8 7 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 Low confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 23 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 12 77081454 129128853 1 11 250 4 1 0 0 6 0.04 0.88 8 0 0 8 3 6 8 3 3 82.7 99.92 0 0 4 3 Whitelist ESAD-UK 5_9 0.68 1 0 0 0.36 1 Linked to high confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 16 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 13 50615386 100290928 1 5 250 1 1 0 0 3 0.57 0.49 2 0 0 NA NA NA NA NA NA 82.7 100 0 1 4 5 Whitelist ESAD-UK 18 0.93 0.73 0 0 0.64 1 Linked to low confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 14 NA NA 0 0 250 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 15 NA NA 0 0 250 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 16 78587293 78944270 1 3 250 3 0 0 0 0 0.03 1 6 0 0 6 5 6 11 5 7 82.7 99.75 0.15 0 3 1 Whitelist ESAD-UK 0.41 1 0 0 0.33 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 17 10512475 12938382 1 1 250 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 9 3 3 82.7 92.58 2.99 0 2 4 Whitelist ESAD-UK 0.62 0.68 0 NA 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 18 14973143 55776093 23 29 250 6 7 5 5 6 0.92 0 46 0 0 46 5 9 48 5 9 82.7 38.98 54.76 0 2 6 Whitelist ESAD-UK 0.93 0 0 0 0.94 1 Low confidence ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA With other complex events 52 0.1 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 19 NA NA 0 0 250 0 0 0 0 0 NA 1 NA 0.2 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 0.2 NA NA 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 20 23214462 25214090 3 7 250 1 0 0 2 4 0.3 0 13 0 0 13 3 7 20 3 7 82.7 93.16 0 4 5 3 Whitelist ESAD-UK 0.77 0.01 0 0 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 21 21031780 41328485 1 2 250 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 6 5 5 82.7 77.19 0.17 0 2 3 Whitelist ESAD-UK 0.54 0.93 NA 0 0.48 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 22 47081391 48394249 2 3 250 2 0 0 0 1 0.11 0.01 3 0 0 NA NA NA 9 3 3 82.7 99.15 0.15 0 3 4 Whitelist ESAD-UK 0.41 0.05 0 0 0.48 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-003 X 65562840 65605595 1 1 250 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 82.7 0.03 99.97 0 2 3 Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-SH-003 ESAD 0.53 3.64 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50385 OCCAMS-SH-003 male deceased C15.5 no treatment 76 626 626 Current reformed smoker, duration not specified NA yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 20.59 ESAD-UK::OCCAMS-SH-020 1 16463561 246651278 1 11 191 2 4 1 1 3 0.39 1 15 0 0 15 3 7 16 3 4 43.7 3.13 96.87 0 2 6 Whitelist ESAD-UK 0.68 1 0 0 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 19 0.05 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 2 41464078 206025228 1 9 191 3 3 1 0 2 0.28 0.9 13 0 0 13 3 4 17 4 5 43.7 41.53 58.36 14 2 3 Whitelist ESAD-UK 0.85 1 0 0 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 16 0.04 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 3 168692440 170511890 36 41 191 12 9 8 7 5 0.67 0 19 0 0 19 3 4 31 5 5 43.7 33.69 66.24 68 8 7 Whitelist ESAD-UK 0.68 0 0 0 0.74 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 77 0.2 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 4 124472748 124512982 2 2 191 0 0 1 1 0 0.57 0.31 2 0 0 NA NA NA 7 3 3 43.7 1.11 98.86 0 2 4 Whitelist ESAD-UK 0.68 0.56 0 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 5 84914399 114092049 1 4 191 1 1 0 0 2 0.57 0.01 1 0 0 NA NA NA NA NA NA 43.7 0 99.82 0 2 NA Whitelist ESAD-UK 1 0.05 0 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 6 0.02 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 6 15328139 162900251 1 7 191 2 4 0 0 1 0.06 0.22 6 0 0 6 3 6 7 3 7 43.7 9.21 90.65 0 2 3 Whitelist ESAD-UK 0.41 0.45 0 0 0.48 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 13 0.03 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 7 1875119 126045001 1 7 191 1 2 1 1 2 0.9 0.87 3 0 0 NA NA NA 6 5 6 43.7 98.62 1.15 0 4 3 Whitelist ESAD-UK 0.96 1 0 0 0.92 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 12 0.03 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 8 62536022 100151607 1 6 191 0 3 0 0 3 0.03 0.87 8 0 0 8 3 8 12 3 3 43.7 72.48 23.99 2 3 4 Whitelist ESAD-UK 0.25 1 0 0 0.33 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 9 0.02 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 9 26035923 131764723 1 2 191 1 1 0 0 0 0.57 0.26 7 0 0 7 3 3 8 4 4 43.7 91.26 5.54 0 3 2 Whitelist ESAD-UK 0.68 0.5 0 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 10 23676907 77448479 1 2 191 1 1 0 0 0 0.57 0.23 4 0 0 4 3 4 6 4 4 43.7 99.67 0.21 0 3 2 Whitelist ESAD-UK 0.68 0.46 0 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 11 3478143 121805343 1 2 191 0 2 0 0 0 0.11 0.04 4 0 0.05 4 4 4 6 5 5 43.7 90.8 8.65 0 3 4 Whitelist ESAD-UK 0.54 0.13 0 0.05 0.48 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 12 5895586 7509164 2 2 191 1 1 0 0 0 0.57 0.73 3 0 0 NA NA NA 4 3 3 43.7 99.92 0 0 3 5 Whitelist ESAD-UK 0.68 0.91 0 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 13 56745713 56796527 1 1 191 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 3 43.7 0.94 84.91 0 2 3 Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 14 43945411 44252733 1 2 191 0 2 0 0 0 0.11 0.84 2 0 0 NA NA NA 4 4 4 43.7 17.61 63.68 0 2 3 Whitelist ESAD-UK 0.54 0.97 0 0 0.48 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 15 72354636 93534913 1 2 191 1 1 0 0 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 43.7 4.78 79.81 0 2 NA Whitelist ESAD-UK 0.68 0.4 NA 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 16 78902548 79198877 2 2 191 2 0 0 0 0 0.11 0 5 0 0 5 3 4 15 3 5 43.7 31.92 63.56 0 2 1 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 17 37719305 37801729 1 1 191 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA 6 0 0 43.7 68.22 27.34 0 9 NA Whitelist ESAD-UK 0.62 0.5 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 18 2496728 37354708 1 3 191 1 0 0 1 1 0.57 0.5 4 NA 0 4 0 3 7 3 4 43.7 74.22 21.14 0 1 2 Whitelist ESAD-UK 0.87 0.74 NA 0 0.64 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 5 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 19 13860727 14074726 1 1 191 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 43.7 65.2 27.52 0 3 NA Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 20 14608928 14748232 2 2 191 2 0 0 0 0 0.11 0.14 2 0 0 NA NA NA 10 6 8 43.7 60.4 32.43 0 3 4 Whitelist ESAD-UK 0.54 0.33 0 0 0.48 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 21 36215488 36450885 1 1 191 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 43.7 0.49 76.86 0 0 2 Whitelist ESAD-UK 0.62 0.91 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 2 0.01 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 22 NA NA 0 0 191 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-020 X 7065672 146620271 1 12 191 9 3 0 0 0 0 0.09 2 0 0 NA NA NA NA NA NA 43.7 96.84 0 0 1 NA Whitelist ESAD-UK 0.04 0.26 0 0 0.03 0 No ESAD-UK OCCAMS-SH-020 ESAD 0.23 2.45 Eso-AdenoCA NA 24 0.06 NA 3 ESAD-UK DO50307 OCCAMS-SH-020 male alive C15.5 no treatment 73 1294 1294 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 42.57 ESAD-UK::OCCAMS-SH-024 1 32513613 249217731 30 52 656 6 12 6 6 22 0.31 0 114 0 0 114 6 13 134 6 13 91.06 86.97 10.05 0 6 7 Whitelist ESAD-UK 3 1 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA With other complex events 82 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 2 42976195 43496869 5 5 656 0 3 1 1 0 0.28 0.72 11 0 0 11 0 4 72 9 12 91.06 97.3 0 0 17 5 Whitelist ESAD-UK 0.62 0.9 0 0 0.59 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 3 101679749 195089023 40 49 656 9 14 6 11 9 0.33 0 116 0 0 116 6 6 142 6 7 91.06 99.86 0 5 7 3 Whitelist ESAD-UK 0.71 0 0 0 0.59 0 Low confidence ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA With other complex events 89 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 4 1687132 175651479 1 10 656 3 7 0 0 0 0 0 22 0 0 22 9 9 24 9 9 91.06 99.62 0.16 1 3 5 Whitelist ESAD-UK 0.18 0 0 0 0.14 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 5 36903586 180360771 1 13 656 0 8 1 2 2 0 0 21 0 0 21 3 8 24 4 8 91.06 97.33 0 3 3 4 Whitelist ESAD-UK 0.15 0 0 0 0.09 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 24 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 6 109182874 109783618 10 10 656 4 6 0 0 0 0.01 0.51 10 0 0 10 3 4 45 13 13 91.06 88.39 8.45 0 4 5 Whitelist ESAD-UK 0.3 0.75 0 0 0.23 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 7 94870838 95785246 3 3 656 0 1 1 1 0 0.8 0.73 3 0 0 NA NA NA 51 7 12 91.06 99.77 0 0 6 8 Whitelist ESAD-UK 0.87 0.9 0 0 0.84 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 8 29116369 29502929 2 3 656 0 1 1 0 1 0.57 0.48 4 0 0 4 0 3 42 10 15 91.06 99.99 0 0 4 5 Whitelist ESAD-UK 0.87 0.72 0 0 0.64 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 5 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 9 139391707 139923482 4 4 656 0 4 0 0 0 0.01 0.03 8 0 0 8 0 4 34 5 9 91.06 99.33 0 0 9 6 Whitelist ESAD-UK 0.21 0.12 0 0 0.16 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 10 5494645 126188848 1 10 656 1 4 0 1 4 0.11 0 16 0 0 16 4 5 17 4 5 91.06 96.43 0.14 0 3 5 Whitelist ESAD-UK 0.62 0 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 16 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 11 13166088 118303089 3 19 656 0 3 1 2 13 0.34 0.52 41 0 0 41 4 4 48 4 4 91.06 96.54 0 0 4 6 Whitelist ESAD-UK 0.68 0.76 0 0 0.59 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 12 4780789 49707936 11 13 656 1 1 5 4 2 0.2 0 33 0 0 33 3 7 87 9 10 91.06 78.74 17.51 1 2 9 Whitelist ESAD-UK 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 24 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 13 50679191 113610928 1 6 656 0 4 0 0 2 0.01 0 11 0 0 11 7 9 12 7 7 91.06 97.22 0 0 4 6 Whitelist ESAD-UK 0.54 0 0 0 0.16 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 14 102914043 103107029 2 2 656 0 2 0 0 0 0.11 0.5 4 0 0 4 0 3 29 4 5 91.06 95.93 0.36 0 6 9 Whitelist ESAD-UK 0.54 0.75 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 15 41087439 86590323 1 13 656 3 9 1 0 0 0 1 24 0 0 24 4 7 27 5 6 91.06 95.11 0 0 6 7 Whitelist ESAD-UK 0.1 1 0 0 0.07 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 16 84856781 85382337 3 3 656 0 3 0 0 0 0.03 0.4 2 0 0 NA NA NA 32 5 15 91.06 93.46 1.68 0 4 6 Whitelist ESAD-UK 0.41 0.64 0 0 0.33 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 17 32296813 72814486 4 11 656 1 3 0 0 7 0.11 0 21 0 0 21 3 6 65 6 9 91.06 85.52 7.72 0 5 3 Whitelist ESAD-UK 0.87 0 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 18 19468571 19845166 2 4 656 0 2 0 0 2 0.11 0.54 6 0 0 6 0 4 26 4 5 91.06 94.78 0 0 9 8 Whitelist ESAD-UK 0.62 0.77 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 19 36179788 40358903 2 2 656 0 0 1 1 0 0.57 0 7 0 0 7 0 4 73 6 6 91.06 89.94 2.79 0 4 5 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 20 17597175 60646850 5 16 656 1 3 2 4 6 0.57 0 30 0 0 30 3 6 41 3 6 91.06 92.87 0 0 6 10 Whitelist ESAD-UK 3 0.54 0 0 0 0.64 0 Linked to low confidence ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA With other complex events 26 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 21 43459129 45931987 2 4 656 0 3 1 0 0 0.11 0 19 0 0 19 3 4 26 3 5 91.06 52.73 24.62 0 8 3 Whitelist ESAD-UK 0.54 0.02 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 22 41182796 43760544 2 7 656 1 3 0 0 3 0.11 0 9 0 0 9 0 4 28 5 15 91.06 100 0 0 4 6 Whitelist ESAD-UK 0.68 0 0 0 0.48 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-024 X 7270220 77354154 1 5 656 3 0 0 0 2 0.03 0 6 0 0 6 4 6 9 6 6 91.06 94.79 3.55 1 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.33 0 No ESAD-UK OCCAMS-SH-024 ESAD 0.25 4.5 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:4 4 ESAD-UK DO50309 OCCAMS-SH-024 male deceased C15.5 no treatment 78 64 64 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 2.11 ESAD-UK::OCCAMS-SH-038 1 245416760 245499005 2 2 146 0 0 1 1 0 0.57 0.64 1 0 0 NA NA NA 11 6 9 34.18 42.89 57.11 0 3 NA Whitelist ESAD-UK 0.68 0.85 0 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 2 117047259 187451936 1 2 146 2 0 0 0 0 0.11 0.13 5 0 0 5 3 5 9 4 6 34.18 37.97 59.31 3 2 0 Whitelist ESAD-UK 0.54 0.33 0 0 0.48 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 3 60302306 60527815 3 3 146 3 0 0 0 0 0.03 0.52 7 0 0 7 6 7 20 6 10 34.18 69.38 27.56 0 0 1 Whitelist ESAD-UK 0.41 0.76 0 0 0.33 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 4 13404057 187928990 1 21 146 8 1 0 3 9 0.01 0 18 0 0 18 8 8 19 9 9 34.18 54.63 43 1 1 2 Whitelist ESAD-UK 15 0.66 0 0 0 0.16 0 Linked to low confidence ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA With other complex events 33 0.11 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 5 58358887 59103711 1 2 146 1 1 0 0 0 0.57 0.23 4 0 0 4 3 4 9 4 4 34.18 0.99 96.33 0 2 1 Whitelist ESAD-UK 0.68 0.46 0 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 6 34702803 162801437 1 7 146 2 0 2 1 2 0.53 0.86 9 0 0 9 6 6 12 7 7 34.18 6.8 93.06 1 2 1 Whitelist ESAD-UK 0.62 0.99 0 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 7 11542645 17541216 2 3 146 1 1 0 0 1 0.57 0.07 8 0 0 8 4 6 15 4 7 34.18 36.52 60.79 0 4 6 Whitelist ESAD-UK 0.87 0.2 0 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 8 113044390 113296100 1 1 146 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA 5 3 5 34.18 99.99 0 1 1 3 Whitelist ESAD-UK 0.62 0.7 0 NA 0.59 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 9 124566824 124803598 1 1 146 0 1 0 0 0 0.39 0.83 1 0 NA NA NA NA NA NA NA 34.18 20.93 78.37 0 2 NA Whitelist ESAD-UK 0.62 0.97 0 NA 0.59 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 10 NA NA 0 0 146 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.38 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 11 NA NA 0 0 146 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.21 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 12 NA NA 0 0 146 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.58 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 13 62989782 63191875 1 1 146 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA 5 3 3 34.18 100 0 1 1 3 Whitelist ESAD-UK 0.62 0.74 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 14 NA NA 0 0 146 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.26 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 15 69087827 94966186 1 4 146 1 0 1 1 1 0.8 0.61 8 0 0 8 6 8 9 7 7 34.18 99.99 0.01 2 3 4 Whitelist ESAD-UK 1 0.82 0 0 0.84 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 16 78549537 78813869 3 4 146 3 0 0 0 1 0.03 0.06 7 0 0 7 5 7 10 5 5 34.18 49.19 50.05 0 1 0 Whitelist ESAD-UK 0.54 0.19 0 0 0.33 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 17 26663234 66204181 24 28 146 7 4 5 8 4 0.64 0 38 0 0 38 4 4 40 4 5 34.18 13.5 81 4 2 3 Whitelist ESAD-UK 4 0.98 0 0 0 0.72 0 Low confidence ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA With other complex events 52 0.18 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 18 25737977 35993659 1 2 146 1 0 1 0 0 0.57 0.45 4 NA 0 4 4 4 6 4 4 34.18 62.45 32.9 0 1 2 Whitelist ESAD-UK 0.68 0.69 NA 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 19 54484599 57732939 2 2 146 1 1 0 0 0 0.57 0.22 2 0 0 NA NA NA 4 3 3 34.18 15.52 83.66 0 3 4 Whitelist ESAD-UK 0.68 0.45 0 0 0.64 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 20 NA NA 0 0 146 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 21 NA NA 0 0 146 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 22 38172072 38266124 1 1 146 0 1 0 0 0 0.39 0.69 1 NA NA NA NA NA NA NA NA 34.18 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.89 NA NA 0.59 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-038 X 13756159 133401520 1 4 146 2 2 0 0 0 0.26 0.85 9 0 0 9 7 9 10 8 8 34.18 9.26 90.73 3 2 1 Whitelist ESAD-UK 0.62 0.98 0 0 0.59 0 No ESAD-UK OCCAMS-SH-038 ESAD 0.25 2.35 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:2 2 ESAD-UK DO50387 OCCAMS-SH-038 male alive C15.5 no treatment 81 1051 1051 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 34.57 ESAD-UK::OCCAMS-SH-051 1 160780664 178102081 10 10 450 3 3 2 2 0 0.94 0.05 13 0 0 13 4 6 47 5 7 36.88 83.91 12.77 0 4 5 Whitelist ESAD-UK 0.96 0.17 0 0 0.96 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 2 175049373 175133248 2 2 450 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 13 9 9 36.88 0.82 99.08 0 1 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 3 135893067 155972271 10 10 450 2 5 2 1 0 0.31 1 10 0 0 10 3 10 30 7 7 36.88 29.92 69.93 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 4 40023324 92402236 1 2 450 2 0 0 0 0 0.11 0 4 0 0 4 4 4 7 5 5 36.88 0.39 99.54 0 0 2 Whitelist ESAD-UK 0.54 0 0 0 0.48 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 5 121416987 177923274 5 5 450 1 2 0 2 0 0.53 0.44 7 0 0 7 7 7 39 8 8 36.88 22.56 74.76 0 2 1 Whitelist ESAD-UK 0.68 0.69 0 0 0.64 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 6 41294190 41642595 7 7 450 1 2 3 1 0 0.67 0.07 4 0 0 4 0 3 13 6 6 36.88 0.59 99.27 0 2 3 Whitelist ESAD-UK 0.77 0.22 0 0 0.74 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 7 16825646 17114123 4 4 450 0 1 2 1 0 0.57 0.06 3 0 0 NA NA NA 12 5 5 36.88 74.98 24.79 0 3 4 Whitelist ESAD-UK 0.68 0.18 0 0 0.64 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 8 15493178 116198864 48 53 450 8 13 8 19 5 0.08 0 50 0 0 50 12 13 67 12 15 36.88 55.04 41.14 0 3 5 Whitelist ESAD-UK 14 0.54 0 0 0 0.48 1 High confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 101 0.11 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 9 83628603 122095709 8 8 450 4 1 2 1 0 0.39 0.09 18 0 0 18 9 13 29 10 10 36.88 52.33 44.57 0 3 4 Whitelist ESAD-UK 0.62 0.24 0 0 0.59 1 High confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 16 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 10 1449967 129457144 30 48 450 8 10 6 6 18 0.69 0 63 0 0 63 16 63 64 16 16 36.88 59.14 40.57 1 3 2 Whitelist ESAD-UK 0.79 0 0 0 0.77 1 High confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 78 0.09 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 11 83876112 130719233 10 10 450 4 2 2 2 0 0.75 0.12 23 0 0 23 6 12 30 7 7 36.88 85.87 13.7 4 3 2 Whitelist ESAD-UK 0.86 0.3 0 0 0.83 1 Low confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 20 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 12 190742 71732723 1 3 450 1 2 0 0 0 0.3 0 3 0 0 NA NA NA NA NA NA 36.88 24.8 71.46 0 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 13 26151195 48999434 2 2 450 0 0 1 1 0 0.57 0.44 6 0 0 6 3 6 21 6 10 36.88 99.97 0.03 1 3 1 Whitelist ESAD-UK 0.68 0.69 0 0 0.64 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 14 44423329 81442645 1 7 450 7 0 0 0 0 0 0.5 12 0 0 12 8 12 17 9 9 36.88 53.28 30.8 0 2 3 Whitelist ESAD-UK 0.02 0.74 0 0 0.01 1 Linked to high confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA Canonical without polyploidization 14 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 15 25613015 70179239 1 2 450 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 6 5 5 36.88 4.09 95.91 0 1 2 Whitelist ESAD-UK 0.54 0.02 NA 0 0.48 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 16 78480354 78730442 2 2 450 2 0 0 0 0 0.11 0.77 4 0 0 4 3 4 14 6 6 36.88 43.16 51.53 0 1 0 Whitelist ESAD-UK 0.54 0.93 0 0 0.48 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 17 35498058 80272573 17 20 450 7 3 4 3 3 0.47 0 34 0 0 34 8 13 53 8 8 36.88 65.15 29.13 1 4 3 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 High confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 37 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 18 37052523 37303662 2 2 450 2 0 0 0 0 0.11 0.19 3 0 0 NA NA NA 8 4 4 36.88 12.01 87.96 0 0 1 Whitelist ESAD-UK 0.54 0.41 0 0 0.48 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 19 NA NA 0 0 450 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.02 NA NA NA 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 20 5950515 31121490 1 4 450 1 2 0 0 1 0.3 0.51 6 0 0 6 3 5 9 3 6 36.88 58 35.05 0 3 4 Whitelist ESAD-UK 0.68 0.76 0 0 0.59 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 21 31095046 41023118 1 2 450 1 1 0 0 0 0.57 0.19 3 NA 0 NA NA NA NA NA NA 36.88 0.46 76.89 0 2 3 Whitelist ESAD-UK 0.68 0.41 NA 0 0.64 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 22 17442768 50503273 1 7 450 0 2 0 1 4 0.3 0.12 7 0 0 7 4 6 7 4 6 36.88 49.32 49.11 0 3 2 Whitelist ESAD-UK 10 0.77 0.31 0 0 0.59 1 Linked to high confidence ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA With other complex events 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-051 X 41419402 146994330 1 9 450 8 1 0 0 0 0 0 12 0 0 12 5 12 13 6 6 36.88 0.79 99.21 4 1 2 Whitelist ESAD-UK 0.02 0.01 0 0 0.02 1 No ESAD-UK OCCAMS-SH-051 ESAD 0.69 2.44 Eso-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 ESAD-UK DO50388 OCCAMS-SH-051 male alive C15.5 no treatment 71 914 914 Current reformed smoker, duration not specified NA yes Social Drinker (> once a month, < once a week) Included Eso-AdenoCA ESAD UK 1 30.07 ESAD-UK::OCCAMS-SH-071 1 189413812 204506567 1 2 284 1 1 0 0 0 0.57 0 4 0 0 4 3 4 10 6 6 76.28 48.24 48.79 0 3 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 2 1433412 205567515 1 7 284 3 1 0 0 3 0.11 0 9 0 0 9 4 9 11 5 5 76.28 99.72 0.17 2 3 2 Whitelist ESAD-UK 0.62 0 0 0 0.48 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 11 0.02 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 3 60159959 60843006 4 4 284 4 0 0 0 0 0.01 0.05 10 0 0 10 7 10 33 10 10 76.28 96.68 0.2 0 1 0 Whitelist ESAD-UK 0.21 0.16 0 0 0.16 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 4 78598011 151944116 2 4 284 2 0 1 1 0 0.57 0.72 10 0 0 10 6 9 23 6 7 76.28 60.3 39.7 0 1 2 Whitelist ESAD-UK 0.68 0.9 0 0 0.64 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 5 17782691 104570806 1 7 284 5 2 0 0 0 0.02 0.27 11 0 0 11 3 6 18 3 5 76.28 97.19 0.14 0 3 6 Whitelist ESAD-UK 0.41 0.51 0 0 0.33 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 14 0.02 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 6 1818672 168250030 1 20 284 10 0 0 0 10 0 0.32 28 0 0 28 9 15 29 9 11 76.28 84.52 15.34 0 3 2 Whitelist ESAD-UK 9 0.41 0.57 0 0 0 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 30 0.05 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 7 110703100 110768860 2 2 284 2 0 0 0 0 0.11 0 4 0 0 4 3 4 28 8 10 76.28 97.36 0.1 0 5 1 Whitelist ESAD-UK 0.54 0 0 0 0.48 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 8 39493843 51591132 2 5 284 0 1 0 1 3 0.57 0.17 5 0 0 5 0 3 15 5 6 76.28 91.26 5.21 0 4 5 Whitelist ESAD-UK 6 0.62 0.39 0 0 0.64 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 7 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 9 21870396 30687016 2 4 284 3 0 1 0 0 0.11 0.88 7 0 0 7 7 7 10 7 7 76.28 69.99 29.3 0 2 1 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 10 3286344 96647536 2 2 284 0 1 0 1 0 0.57 0.89 13 0 0 13 7 7 16 9 9 76.28 96.61 0 0 4 3 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 4 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 11 506106 124409584 1 10 284 4 2 2 0 2 0.26 1 7 0 0 7 3 5 9 4 5 76.28 99.82 0.01 0 4 2 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 18 0.03 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 12 100007529 100089986 1 1 284 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 4 4 76.28 99.92 0.06 0 2 3 Whitelist ESAD-UK 0.62 0.01 NA NA 0.59 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 2 0 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 13 36921892 114628279 1 9 284 4 2 0 0 3 0.06 0.1 19 0 0 19 4 5 21 4 5 76.28 96.75 0.29 1 7 4 Whitelist ESAD-UK 0.41 0.27 0 0 0.48 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 15 0.03 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 14 43502966 43522195 1 1 284 1 0 0 0 0 0.39 0.12 2 0 NA NA NA NA 5 3 3 76.28 50.62 30.68 0 1 2 Whitelist ESAD-UK 0.62 0.31 0 NA 0.59 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 2 0 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 15 42066409 91876190 29 32 284 4 10 8 7 3 0.46 0 35 0 0 35 5 5 38 5 6 76.28 94.96 0.16 0 3 8 Whitelist ESAD-UK 0.62 0 0 0 0.64 1 Low confidence ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA With other complex events 61 0.11 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 16 63272340 78915510 1 4 284 4 0 0 0 0 0.01 0.71 6 0 0 6 3 6 8 4 4 76.28 99.59 0.32 0 2 3 Whitelist ESAD-UK 0.21 0.9 0 0 0.16 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 17 14157559 60556542 1 3 284 0 2 0 0 1 0.11 0.1 6 NA 0 6 4 6 7 5 5 76.28 95.41 0 0 3 4 Whitelist ESAD-UK 0.62 0.26 NA 0 0.48 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 5 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 18 77013869 77048371 1 1 284 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 76.28 99.92 0.04 0 2 3 Whitelist ESAD-UK 0.62 0.04 NA NA 0.59 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 2 0 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 19 910192 23977386 49 49 284 14 6 12 17 0 0.15 0 71 0 0 71 11 13 76 11 13 76.28 66.65 24.93 14 2 3 Whitelist ESAD-UK 0.62 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA With other complex events 98 0.17 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 20 8161127 14876499 2 4 284 4 0 0 0 0 0.01 0.01 5 0 0 5 4 5 21 4 5 76.28 91.86 0.97 0 2 3 Whitelist ESAD-UK 0.21 0.03 0 0 0.16 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 8 0.01 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 21 36223320 36366882 1 1 284 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 4 4 76.28 16.18 53.83 0 0 2 Whitelist ESAD-UK 0.62 0.52 NA NA 0.59 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 2 0 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 22 NA NA 0 0 284 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 0 0 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-SH-071 X 6926082 120850469 1 10 284 3 0 0 0 7 0.03 1 1 0 0 NA NA NA NA NA NA 76.28 1.74 98.26 0 2 NA Whitelist ESAD-UK 0.62 1 0 0 0.33 1 No ESAD-UK OCCAMS-SH-071 ESAD 0.42 3.56 Eso-AdenoCA NA 13 0.02 NA 3 ESAD-UK DO50389 OCCAMS-SH-071 male deceased C15.5 no treatment 65 910 712 Current reformed smoker, duration not specified 37 no None Included Eso-AdenoCA ESAD UK 1 29.93 ESAD-UK::OCCAMS-ST-020 1 246308880 246601604 2 2 165 1 1 0 0 0 0.57 0.04 4 0 0 4 3 4 9 5 5 30.07 0.11 99.89 0 2 1 Whitelist ESAD-UK 0.68 0.14 0 0 0.64 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 2 2097136 240675922 80 80 165 25 19 18 18 0 0.64 0 78 0 0 78 50 78 79 51 51 30.07 53.09 46.8 17 1 2 Whitelist ESAD-UK 0.75 0 0 0 0.71 1 High confidence ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA Canonical without polyploidization 160 0.48 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 3 60139046 139899327 1 4 165 3 1 0 0 0 0.11 0.09 8 0 0 8 4 8 9 4 4 30.07 0.55 99.4 0 1 2 Whitelist ESAD-UK 0.54 0.26 0 0 0.48 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 4 NA NA 0 0 165 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 5 58321769 58369151 1 1 165 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 30.07 99.83 0 0 0 1 Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 6 1754598 162571064 1 5 165 4 1 0 0 0 0.04 0.25 8 0 0 8 5 8 9 5 5 30.07 0.2 99.67 0 2 1 Whitelist ESAD-UK 0.45 0.49 0 0 0.36 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 7 10538234 110329114 1 2 165 1 0 0 1 0 0.57 0.73 2 0 0 NA NA NA NA NA NA 30.07 0.1 99.67 0 1 2 Whitelist ESAD-UK 0.68 0.9 0 0 0.64 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 8 126173548 126195425 1 1 165 1 0 0 0 0 0.39 0.29 1 0.01 NA NA NA NA NA NA NA 30.07 2.75 97.24 0 2 NA Whitelist ESAD-UK 0.62 0.53 0.01 NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 9 9262305 9649428 1 1 165 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 30.07 99.3 0 0 0 1 Whitelist ESAD-UK 0.62 0.09 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 10 76962789 86210707 1 3 165 2 1 0 0 0 0.3 0.09 2 0 0 NA NA NA NA NA NA 30.07 0.19 99.63 0 2 3 Whitelist ESAD-UK 0.62 0.26 0 0 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 11 57419408 60834676 2 2 165 0 0 1 1 0 0.57 0.09 4 NA 0 4 4 4 7 5 5 30.07 50.85 48.72 1 1 2 Whitelist ESAD-UK 0.68 0.26 NA 0 0.64 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 12 128548784 128593930 1 1 165 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 30.07 0.03 99.88 0 2 3 Whitelist ESAD-UK 0.62 0.04 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 13 87287222 109907968 1 3 165 1 1 0 0 1 0.57 0.39 3 NA 0 NA NA NA 4 4 4 30.07 74.86 25.14 0 2 1 Whitelist ESAD-UK 0.62 0.63 NA 0 0.64 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 14 29737781 29799497 1 1 165 0 1 0 0 0 0.39 0.82 2 0 NA NA NA NA NA NA NA 30.07 0.06 99.03 0 2 3 Whitelist ESAD-UK 0.62 0.96 0 NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 15 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 16 78547188 79105399 1 2 165 2 0 0 0 0 0.11 1 4 0 0 4 4 4 5 5 5 30.07 0.42 99.49 0 1 2 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 17 58976026 59409573 1 1 165 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 4 4 30.07 27.88 67.69 0 1 2 Whitelist ESAD-UK 0.62 0.34 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 18 1524644 24959091 6 6 165 2 1 2 1 0 0.88 0.05 13 0 0 13 6 6 15 6 6 30.07 91.71 8.26 14 1 2 Whitelist ESAD-UK 0.93 0.15 0 0 0.91 1 Low confidence ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA With other complex events 12 0.04 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 19 NA NA 0 0 165 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 20 14472250 14525271 1 1 165 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 4 30.07 70.07 22.93 0 1 3 Whitelist ESAD-UK 0.62 0.52 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 21 36199236 36242193 1 1 165 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 30.07 44.64 32.72 0 1 2 Whitelist ESAD-UK 0.62 0.9 NA NA 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 22 33673810 40944837 1 2 165 2 0 0 0 0 0.11 0.72 4 NA 0 4 4 4 5 5 5 30.07 1.68 98.32 0 1 2 Whitelist ESAD-UK 0.54 0.9 NA 0 0.48 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-020 X 10242455 144860042 1 4 165 2 1 0 0 1 0.3 0.15 3 0.01 0 NA NA NA NA NA NA 30.07 99.95 0.05 0 1 2 Whitelist ESAD-UK 0.68 0.36 0.01 0 0.59 1 No ESAD-UK OCCAMS-ST-020 ESAD 0.43 1.76 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578413_T_C,CN:1 2 ESAD-UK DO50311 OCCAMS-ST-020 male deceased C15.5 no treatment 70 274 274 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 9.01 ESAD-UK::OCCAMS-ST-023 1 104611655 104644689 1 1 6 0 1 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 4.95 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.63 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 2 0.17 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 8 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.12 NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 13 28621553 28841681 1 1 6 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 4.95 0 85.85 0 2 NA Whitelist ESAD-UK 0.62 0.41 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 2 0.17 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 19 NA NA 0 0 6 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.29 NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 21 36232519 36310861 1 1 6 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 4.95 0 77.35 0 2 NA Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 2 0.17 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-023 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-023 ESAD 0.24 1.95 Eso-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577547_A_C;17_7578403_A_C,CN:2 2 ESAD-UK DO50390 OCCAMS-ST-023 male alive C15.5 no treatment 67 673 673 Current reformed smoker, duration not specified NA no None Included Eso-AdenoCA ESAD UK 1 22.14 ESAD-UK::OCCAMS-ST-029 1 156743404 225321261 3 5 286 0 0 1 2 2 0.3 0.74 6 0 0 6 5 6 24 6 9 65.54 48.71 48.32 0 3 1 Whitelist ESAD-UK 3 0.68 0.91 0 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 2 168801724 168997944 2 2 286 0 0 1 1 0 0.57 0 4 0 0 4 4 4 19 5 13 65.54 99.86 0.03 0 3 5 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 3 95430675 120257036 3 6 286 0 1 0 2 3 0.3 0.91 11 0 0 11 5 9 27 9 15 65.54 50.94 45.74 0 3 2 Whitelist ESAD-UK 1 0.54 1 0 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 9 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 4 40646422 135860336 1 7 286 1 5 0 0 1 0.01 0.03 11 0 0 11 7 7 12 7 7 65.54 76.2 23.78 1 3 4 Whitelist ESAD-UK 0.41 0.12 0 0 0.19 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 13 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 5 52303714 141055151 1 5 286 1 1 0 1 2 0.8 0.05 9 0 0 9 5 5 15 5 5 65.54 99.53 0.33 0 3 5 Whitelist ESAD-UK 2 0.93 0.17 0 0 0.84 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 6 80712446 105721586 23 23 286 7 3 6 7 0 0.6 0 20 0 0 20 13 20 31 16 26 65.54 66.44 33.41 3 1 3 Whitelist ESAD-UK 0.71 0.02 0 0 0.67 1 High confidence ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA Canonical without polyploidization 46 0.08 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 7 17883832 157603642 1 12 286 4 3 0 0 5 0.06 0.79 15 0 0 15 5 7 16 5 7 65.54 62.93 36.85 0 2 4 Whitelist ESAD-UK 0.54 0.95 0 0 0.48 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 19 0.03 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 8 35923238 145555559 1 8 286 1 5 2 0 0 0.07 0.89 16 0 0 16 6 6 17 6 6 65.54 99.52 0 0 8 6 Whitelist ESAD-UK 0.54 1 0 0 0.48 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 16 0.03 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 9 18394399 139562954 49 57 286 13 17 8 11 8 0.32 0 73 0 0 73 11 11 73 11 11 65.54 80 16.89 39 3 2 Whitelist ESAD-UK 12 0.92 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA With other complex events 106 0.19 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 10 7843024 104984641 2 6 286 1 0 0 1 4 0.57 0.78 19 0 0 19 3 5 21 3 5 65.54 67.7 28.95 0 3 5 Whitelist ESAD-UK 0.62 0.93 0 0 0.64 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 11 6553127 118518435 1 4 286 3 1 0 0 0 0.11 0.02 7 0 0 7 3 6 8 3 3 65.54 99.57 0 0 4 1 Whitelist ESAD-UK 0.54 0.07 0 0 0.48 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 12 13909019 15158940 3 6 286 1 1 0 1 3 0.8 0.67 7 0 0 7 5 7 14 5 9 65.54 99.07 0.91 0 3 4 Whitelist ESAD-UK 9 0.68 0.88 0 0 0.84 1 Linked to high confidence ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA After polyploidization 9 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 13 33239264 51295990 1 6 286 3 1 0 0 2 0.11 1 6 0 0 6 3 5 7 3 5 65.54 99.97 0.03 0 6 2 Whitelist ESAD-UK 4 0.68 1 0 0 0.48 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 14 29297108 103354621 1 5 286 1 1 1 1 1 1 0.87 11 0 0 11 3 5 14 3 3 65.54 33.45 62.84 0 2 0 Whitelist ESAD-UK 0.93 1 0 0 1 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 9 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 15 55508283 71551723 1 3 286 2 1 0 0 0 0.3 1 5 0 0 5 3 5 11 3 5 65.54 17.7 77.52 0 2 0 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 16 1297524 78723526 1 11 286 0 5 0 0 6 0 0.06 15 0 0 15 3 13 16 3 13 65.54 21.99 72.27 0 2 3 Whitelist ESAD-UK 7 0.13 0.19 0 0 0.07 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 16 0.03 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 17 1828973 80871688 9 15 286 2 1 2 4 6 0.55 0 29 0 0 29 4 5 32 4 4 65.54 79.24 15.41 2 8 4 Whitelist ESAD-UK 0.85 0 0 0 0.64 1 Low confidence ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA With other complex events 24 0.04 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 18 4588685 57524047 1 4 286 2 1 0 0 1 0.3 0.27 7 0.01 0 7 3 3 8 3 3 65.54 18.05 77.3 0 2 3 Whitelist ESAD-UK 0.68 0.51 0.01 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 7 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 19 11769489 58938176 1 7 286 2 2 1 0 2 0.53 0.52 9 0 0 9 3 7 9 3 3 65.54 80.21 12.19 0 4 2 Whitelist ESAD-UK 0.68 0.76 0 0 0.64 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 12 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 20 3029402 56836389 1 3 286 1 2 0 0 0 0.3 0.54 6 0.02 0 6 3 3 7 3 3 65.54 99.12 0.2 0 3 2 Whitelist ESAD-UK 0.62 0.77 0.02 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 21 24671077 35278735 5 8 286 2 3 0 0 3 0.14 0 8 0 0 8 4 5 9 4 5 65.54 24.51 52.84 0 4 2 Whitelist ESAD-UK 0.62 0.01 0 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 13 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 22 19750390 48627326 4 6 286 0 3 1 0 2 0.11 0.09 9 0 0 9 3 9 10 3 3 65.54 87.09 12.91 0 2 1 Whitelist ESAD-UK 0.25 0.25 0 0 0.48 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-029 X 7162150 106107230 1 5 286 2 3 0 0 0 0.14 0.01 7 0 0 7 5 7 7 5 7 65.54 0.13 96.59 0 2 3 Whitelist ESAD-UK 0.62 0.03 0 0 0.59 1 No ESAD-UK OCCAMS-ST-029 ESAD 0.35 3.04 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7576856_-_A,CN:4 3 ESAD-UK DO50392 OCCAMS-ST-029 male alive C15.5 no treatment 49 748 748 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 24.61 ESAD-UK::OCCAMS-ST-033 1 10953691 246705970 1 9 131 1 8 0 0 0 0 1 17 0 0 17 7 13 17 7 13 61.17 99.95 0.05 0 3 5 Whitelist ESAD-UK 0.02 1 0 0 0.02 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 18 0.07 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 2 13178329 233510064 1 10 131 0 8 0 0 2 0 0.53 18 0 0 18 7 10 19 7 11 61.17 99.91 0 0 3 5 Whitelist ESAD-UK 0.01 0.76 0 0 0 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 18 0.07 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 3 33574082 101109463 1 6 131 3 3 0 0 0 0.11 0.61 11 0 0 11 5 5 11 5 5 61.17 99.88 0.07 0 3 0 Whitelist ESAD-UK 0.54 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 4 767689 107218497 1 6 131 3 3 0 0 0 0.11 0.48 10 0 0 10 7 9 11 7 7 61.17 0.8 99.19 0 2 1 Whitelist ESAD-UK 0.54 0.73 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 5 6837260 44504381 2 2 131 0 0 1 1 0 0.57 0.59 6 0 0 6 6 6 11 7 11 61.17 63.3 34.03 0 2 3 Whitelist ESAD-UK 0.68 0.81 0 0 0.64 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 6 14178673 164630061 1 5 131 1 3 0 0 1 0.11 0.85 9 0 0 9 3 7 10 3 4 61.17 39.41 60.45 0 2 4 Whitelist ESAD-UK 0.62 0.99 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 7 96564978 148711289 2 6 131 1 2 1 2 0 0.88 0 13 0 0 13 3 7 30 5 8 61.17 97.09 0.24 0 5 4 Whitelist ESAD-UK 0.93 0 0 0 0.91 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 8 101992120 102348188 1 1 131 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 61.17 38.03 61.86 0 4 5 Whitelist ESAD-UK 0.62 0.07 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 9 79534744 86360962 1 2 131 0 2 0 0 0 0.11 0.25 4 NA 0 4 3 4 8 3 5 61.17 69.09 27.79 0 3 4 Whitelist ESAD-UK 0.54 0.49 NA 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 10 21822891 114255993 1 5 131 2 1 1 1 0 0.9 0.67 10 0 0 10 5 6 11 5 5 61.17 98.75 1.07 1 3 2 Whitelist ESAD-UK 0.93 0.88 0 0 0.92 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 11 2059636 129194855 1 4 131 0 2 0 0 2 0.11 0.53 4 0.01 0 4 3 4 5 3 3 61.17 99.44 0 0 3 4 Whitelist ESAD-UK 0.68 0.76 0.01 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 12 56286446 130638250 1 4 131 0 4 0 0 0 0.01 0.53 8 0 0 8 7 8 10 7 10 61.17 39.97 56.29 0 2 3 Whitelist ESAD-UK 0.21 0.76 0 0 0.16 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 13 33749781 85711246 1 6 131 4 2 0 0 0 0.06 0.09 14 0 0 14 3 5 17 3 5 61.17 97.22 0 0 5 3 Whitelist ESAD-UK 0.54 0.26 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 14 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 15 39973571 68329951 1 4 131 1 3 0 0 0 0.11 0.18 7 0 0 7 3 5 7 3 5 61.17 99.87 0 0 3 1 Whitelist ESAD-UK 0.54 0.4 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 16 2983714 84601997 1 6 131 2 3 1 0 0 0.34 0 18 0 0 18 7 9 19 7 9 61.17 98.24 1.67 0 3 5 Whitelist ESAD-UK 0.62 0.02 0 0 0.59 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 17 7931480 8008677 2 2 131 0 1 1 0 0 0.57 0.41 2 0 0 NA NA NA 4 4 4 61.17 0.75 98.42 0 2 4 Whitelist ESAD-UK 0.68 0.66 0 0 0.64 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 18 3087040 3143677 1 1 131 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 61.17 0.07 99.89 0 2 3 Whitelist ESAD-UK 0.62 0.51 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 19 29980825 30082491 2 2 131 1 1 0 0 0 0.57 0.33 4 0 0 4 3 4 10 3 4 61.17 2.69 90.03 0 6 5 Whitelist ESAD-UK 0.68 0.58 0 0 0.64 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 20 33939979 34010226 1 1 131 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 61.17 99.01 0 0 5 6 Whitelist ESAD-UK 0.62 0.77 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 21 23696559 33959984 1 2 131 2 0 0 0 0 0.11 0.08 4 0 0 4 4 4 5 5 5 61.17 5.07 72.28 0 1 2 Whitelist ESAD-UK 0.54 0.22 0 0 0.48 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 22 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-033 X 5343645 152160056 1 3 131 0 3 0 0 0 0.03 0.69 6 0.06 0 6 5 6 7 5 7 61.17 0.3 99.7 1 2 4 Whitelist ESAD-UK 0.41 0.89 0.06 0 0.33 0 No ESAD-UK OCCAMS-ST-033 ESAD 0.3 2.82 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:2 2 ESAD-UK DO50393 OCCAMS-ST-033 male deceased C15.5 no treatment 76 411 411 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 13.52 ESAD-UK::OCCAMS-ST-035 1 205882419 228399580 4 5 137 0 2 1 1 1 0.57 0.04 1 0 0 NA NA NA NA NA NA 5.12 0 99.99 0 2 NA Whitelist ESAD-UK 0.93 0.13 0 0 0.64 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 9 0.03 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 2 26743338 70242582 2 4 137 0 0 1 1 2 0.57 0.16 2 0 0 NA NA NA NA NA NA 5.12 0.2 99.7 0 2 3 Whitelist ESAD-UK 0.68 0.37 0 0 0.64 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 3 4017933 127408451 1 7 137 2 4 0 0 1 0.06 0.74 1 0 0 NA NA NA NA NA NA 5.12 0 99.86 0 2 NA Whitelist ESAD-UK 0.62 0.91 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 13 0.05 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 4 55519890 163027103 1 4 137 1 3 0 0 0 0.11 0.61 3 0 0 NA NA NA NA NA NA 5.12 0.12 99.86 0 2 3 Whitelist ESAD-UK 0.54 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 8 0.03 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 5 697404 788650 1 1 137 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 5.12 0 99.85 0 2 NA Whitelist ESAD-UK 0.62 0.01 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 6 1656490 162718785 1 8 137 3 2 0 0 3 0.14 0.28 3 0 0 NA NA NA NA NA NA 5.12 0.06 99.7 0 2 5 Whitelist ESAD-UK 0.62 0.53 0 0 0.59 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 13 0.05 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 7 30936497 149305867 1 7 137 0 3 1 0 3 0.11 0.71 1 0 0 NA NA NA NA NA NA 5.12 0 99.78 0 2 NA Whitelist ESAD-UK 0.62 0.9 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 11 0.04 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 8 128119448 128755654 2 3 137 0 2 0 0 1 0.11 0.12 4 0 0 4 0 3 4 0 3 5.12 0.09 99.8 0 2 3 Whitelist ESAD-UK 0.62 0.3 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 5 0.02 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 9 28251658 139864031 1 6 137 1 2 1 0 2 0.57 0.26 3 0 0 NA NA NA NA NA NA 5.12 0.15 99.15 0 2 3 Whitelist ESAD-UK 0.93 0.51 0 0 0.64 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 10 0.04 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 10 32088826 121128258 1 2 137 0 2 0 0 0 0.11 0.22 1 NA 0 NA NA NA NA NA NA 5.12 0 99.82 0 2 NA Whitelist ESAD-UK 0.54 0.45 NA 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 11 12693240 13096849 2 4 137 0 0 2 0 2 0.11 0.04 1 0 0 NA NA NA NA NA NA 5.12 0 99.57 0 2 NA Whitelist ESAD-UK 0.68 0.13 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 12 6443759 117567030 1 8 137 0 6 1 0 1 0 0.15 7 0 0 7 7 7 7 7 7 5.12 1.61 93.94 0 2 3 Whitelist ESAD-UK 0.06 0.36 0 0 0.09 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 15 0.05 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 13 73804687 74415848 1 3 137 0 1 0 0 2 0.39 0.64 1 NA 0 NA NA NA NA NA NA 5.12 0 100 0 2 NA Whitelist ESAD-UK 0.62 0.85 NA 0 0.59 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 14 66037482 95744145 1 2 137 1 0 0 0 1 0.39 0.62 1 0 NA NA NA NA NA NA NA 5.12 0 96.29 0 2 NA Whitelist ESAD-UK 0.54 0.84 0 NA 0.59 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 3 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 15 90374121 90615284 2 2 137 0 2 0 0 0 0.11 0.79 1 0 0 NA NA NA NA NA NA 5.12 0 100 0 2 NA Whitelist ESAD-UK 0.54 0.95 0 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 16 2916307 68569174 1 3 137 0 3 0 0 0 0.03 0.79 3 0 0 NA NA NA 4 3 3 5.12 0.71 99.28 0 2 3 Whitelist ESAD-UK 0.41 0.94 0 0 0.33 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 17 26953937 37943568 2 6 137 0 0 1 1 4 0.57 0 5 0 0 5 3 5 7 3 3 5.12 0.41 93.01 1 2 3 Whitelist ESAD-UK 0.54 0 0 0 0.64 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 8 0.03 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 18 19838283 21725456 1 2 137 1 0 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 5.12 0 99.96 0 2 NA Whitelist ESAD-UK 0.68 1 NA 0 0.64 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 19 NA NA 0 0 137 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 20 14573606 49002186 1 9 137 3 6 0 0 0 0.01 0 9 0 0 9 4 7 9 4 4 5.12 0.79 98.24 0 2 3 Whitelist ESAD-UK 0.28 0 0 0 0.21 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 18 0.07 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 21 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 22 23029719 25757880 1 2 137 0 2 0 0 0 0.11 0.22 1 NA 0 NA NA NA NA NA NA 5.12 1.14 98.86 0 2 NA Whitelist ESAD-UK 0.54 0.46 NA 0 0.48 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-035 X 23697284 23899011 1 1 137 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 5.12 100 0 0 1 NA Whitelist ESAD-UK 0.62 0.16 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-035 ESAD 0.96 1.93 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50395 OCCAMS-ST-035 male alive C15.5 no treatment 74 546 546 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Eso-AdenoCA ESAD UK 1 17.96 ESAD-UK::OCCAMS-ST-036 1 105319445 105374543 1 1 54 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 2.87 0.02 99.97 0 2 3 Whitelist ESAD-UK 0.62 0.69 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 2 205453652 206239434 1 2 54 1 1 0 0 0 0.57 0.32 1 NA 0 NA NA NA NA NA NA 2.87 0 99.9 0 2 NA Whitelist ESAD-UK 0.68 0.57 NA 0 0.64 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 3 60166468 60629050 2 2 54 2 0 0 0 0 0.11 0.43 2 0 0 NA NA NA 8 5 6 2.87 0.3 96.53 0 1 2 Whitelist ESAD-UK 0.54 0.68 0 0 0.48 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 4 91065048 91228599 2 2 54 1 1 0 0 0 0.57 0.18 3 0 0 NA NA NA 5 5 5 2.87 0.26 99.73 0 2 1 Whitelist ESAD-UK 0.68 0.39 0 0 0.64 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 5 22956123 101480811 1 4 54 2 2 0 0 0 0.26 0.39 8 0 0 8 3 5 9 3 5 2.87 0.21 99.65 0 2 3 Whitelist ESAD-UK 0.62 0.64 0 0 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 8 0.07 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 6 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 7 1885916 133652389 1 3 54 3 0 0 0 0 0.03 0.77 5 0.02 0 5 5 5 5 5 5 2.87 0.29 99.48 0 2 1 Whitelist ESAD-UK 0.41 0.93 0.02 0 0.33 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 6 0.06 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 8 99879350 100258250 1 2 54 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA 4 0 3 2.87 0.22 99.77 0 2 3 Whitelist ESAD-UK 0.68 1 NA 0 0.64 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 9 21895148 22013280 2 2 54 2 0 0 0 0 0.11 0.47 2 0 0 NA NA NA NA NA NA 2.87 0.08 99.81 0 1 2 Whitelist ESAD-UK 0.54 0.71 0 0 0.48 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 10 30467319 30585239 1 1 54 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 2.87 0.09 99.8 0 2 3 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 11 88837808 88958063 1 1 54 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 6 3 4 2.87 16.95 79.3 0 2 4 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 12 108244579 108329065 1 1 54 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 5 5 5 2.87 24.79 71.47 0 2 3 Whitelist ESAD-UK 0.62 0.76 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 13 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 14 37973155 38035034 1 1 54 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 2.87 0 84.12 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 16 78660959 79075939 1 4 54 3 1 0 0 0 0.11 0 4 0 0 4 4 4 7 7 7 2.87 0.26 99.65 0 1 2 Whitelist ESAD-UK 0.54 0.02 0 0 0.48 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 8 0.07 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 17 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 18 29382077 29459408 2 2 54 1 0 1 0 0 0.57 0.01 3 0 0 NA NA NA 5 0 3 2.87 39.78 60.21 0 2 3 Whitelist ESAD-UK 0.68 0.06 0 0 0.64 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 19 NA NA 0 0 54 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 20 14145507 15344016 1 3 54 3 0 0 0 0 0.03 0.03 4 0 0 4 4 4 5 5 5 2.87 0.19 98.77 0 1 2 Whitelist ESAD-UK 0.41 0.11 0 0 0.33 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 6 0.06 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 21 33068278 33112404 1 1 54 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 2.87 0.09 77.26 0 1 2 Whitelist ESAD-UK 0.62 0.73 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-036 X 31751352 130985111 1 4 54 3 1 0 0 0 0.11 0.2 1 0 0 NA NA NA NA NA NA 2.87 0 99.78 0 2 NA Whitelist ESAD-UK 0.54 0.42 0 0 0.48 0 No ESAD-UK OCCAMS-ST-036 ESAD 0.19 2 Eso-AdenoCA NA 8 0.07 NA 2 ESAD-UK DO50396 OCCAMS-ST-036 female deceased C15.5 no treatment 68 123 123 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 4.05 ESAD-UK::OCCAMS-ST-037 1 16939356 57318442 4 4 438 1 2 1 0 0 0.57 0.13 4 0 0 4 3 4 34 9 9 83.11 69.82 27.12 0 2 3 Whitelist ESAD-UK 0.68 0.32 0 0 0.64 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 2 181395026 211159241 4 4 438 1 1 1 1 0 1 0 3 0 0 NA NA NA 17 8 9 83.11 59.83 40.08 0 2 4 Whitelist ESAD-UK 1 0.01 0 0 1 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 3 83840 67021120 2 6 438 0 2 1 1 2 0.57 0 18 0 0 18 6 13 20 6 6 83.11 99.26 0.73 1 3 2 Whitelist ESAD-UK 0.68 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 4 25659032 182177104 1 5 438 4 1 0 0 0 0.04 0 9 0 0 9 5 9 9 5 9 83.11 99.56 0.42 0 3 1 Whitelist ESAD-UK 0.45 0 0 0 0.36 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 5 4306897 151234108 1 8 438 6 1 0 0 1 0 0.01 16 0 0 16 7 9 20 7 9 83.11 28.27 68.88 0 2 1 Whitelist ESAD-UK 0.28 0.03 0 0 0.09 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 6 2134377 164741134 1 12 438 8 4 0 0 0 0 0 16 0 0 16 5 8 17 5 9 83.11 99.38 0.39 0 4 2 Whitelist ESAD-UK 0.12 0.01 0 0 0.08 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 24 0.03 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 7 12338056 28936629 10 10 438 4 3 1 2 0 0.57 1 7 0 0 7 4 5 22 7 12 83.11 99.5 0.27 0 4 3 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 Low confidence ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA With other complex events 20 0.02 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 8 56764256 133807235 17 20 438 3 5 5 4 3 0.89 0 40 0 0 40 5 5 53 7 7 83.11 80.15 19.84 0 7 3 Whitelist ESAD-UK 0.86 0.01 0 0 0.92 0 Low confidence ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA With other complex events 37 0.04 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 9 19448215 125663302 1 3 438 2 1 0 0 0 0.3 0 4 0 0 4 3 4 5 3 3 83.11 99.3 0 9 4 3 Whitelist ESAD-UK 0.62 0.02 0 0 0.59 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 10 605259 68253254 1 3 438 2 1 0 0 0 0.3 0 4 0 0 4 3 4 5 3 3 83.11 99.55 0.27 0 3 2 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 11 743185 126956282 1 7 438 2 4 0 0 1 0.06 0.01 11 0 0 11 4 7 11 4 7 83.11 81.37 14.87 0 3 4 Whitelist ESAD-UK 0.54 0.03 0 0 0.48 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 12 NA NA 0 0 438 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 13 59595912 64097721 1 2 438 2 0 0 0 0 0.11 0 3 0 0 NA NA NA NA NA NA 83.11 99.86 0 0 4 3 Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 14 27479505 28356706 2 2 438 0 1 0 1 0 0.57 0.01 4 0 0 4 3 4 7 3 4 83.11 95.95 0.34 0 3 2 Whitelist ESAD-UK 0.68 0.06 0 0 0.64 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 15 96832773 97511635 1 1 438 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 0 0 83.11 99.9 0 0 0 1 Whitelist ESAD-UK 0.62 0.02 0 NA 0.59 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 16 78533307 79230809 3 3 438 3 0 0 0 0 0.03 0.1 5 0 0 5 3 4 10 3 5 83.11 99.63 0.28 0 0 1 Whitelist ESAD-UK 0.41 0.27 0 0 0.33 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 17 29160620 67758256 186 215 438 39 51 48 48 29 0.63 0 36 0 0 36 5 5 37 5 5 83.11 61.28 34.27 2 49 3 Whitelist ESAD-UK 0.72 0 0 0 0.7 0 Low confidence ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA With other complex events 401 0.46 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 18 1013275 2323037 1 2 438 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 83.11 98.42 1.54 6 2 3 Whitelist ESAD-UK 0.54 0.01 NA 0 0.48 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 19 NA NA 0 0 438 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 20 32332758 55067512 3 3 438 1 0 1 1 0 0.8 0.18 4 0 0 4 3 4 5 3 3 83.11 96.92 2.1 0 3 2 Whitelist ESAD-UK 0.87 0.4 0 0 0.84 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 21 23957797 25958595 5 5 438 2 3 0 0 0 0.14 0.03 6 0 0 6 3 4 10 7 7 83.11 75.45 1.9 0 3 4 Whitelist ESAD-UK 0.62 0.1 0 0 0.59 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 22 34005312 34212942 1 1 438 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 83.11 99.6 0.4 0 2 3 Whitelist ESAD-UK 0.62 0.21 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-037 X 138492385 143021139 5 5 438 1 0 2 2 0 0.53 0.05 6 0 0 6 4 6 17 5 6 83.11 94.37 2.25 0 3 2 Whitelist ESAD-UK 0.68 0.16 0 0 0.64 0 No ESAD-UK OCCAMS-ST-037 ESAD 0.35 3.47 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 3 ESAD-UK DO50398 OCCAMS-ST-037 female alive C15.5 no treatment 47 360 360 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 11.84 ESAD-UK::OCCAMS-ST-041 1 9137028 35280389 13 18 163 1 3 3 6 5 0.27 0 37 0 0 37 3 4 45 4 4 46.87 100 0 0 7 1 Whitelist ESAD-UK 0.68 0 0 0 0.59 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 31 0.1 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 2 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 3 19281688 60533381 1 5 163 4 1 0 0 0 0.04 0.88 13 0 0 13 4 7 15 4 4 46.87 28.09 71.86 0 1 2 Whitelist ESAD-UK 0.45 1 0 0 0.36 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 10 0.03 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 4 45264831 175136882 2 2 163 1 0 1 0 0 0.57 1 8 0 0 8 4 8 8 4 4 46.87 14.43 83.11 0 2 1 Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 4 0.01 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 5 15221088 46212518 15 15 163 1 4 5 5 0 0.41 0 27 0 0 27 5 8 32 7 9 46.87 40.31 59.57 7 2 1 Whitelist ESAD-UK 0.65 0 0 0 0.62 0 Low confidence ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA With other complex events 30 0.09 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 6 70647964 112029024 6 6 163 2 0 2 2 0 0.57 0.62 10 0 0 10 8 10 14 8 8 46.87 99.87 0 0 1 3 Whitelist ESAD-UK 0.68 0.83 0 0 0.64 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 12 0.04 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 7 26230557 111223964 1 3 163 2 0 0 0 1 0.11 0.23 7 0 0 7 5 7 8 5 5 46.87 97.27 0 0 3 1 Whitelist ESAD-UK 0.62 0.46 0 0 0.48 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 5 0.02 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 8 NA NA 0 0 163 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.35 0 NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 9 32763742 126628452 1 5 163 1 0 0 1 3 0.57 0.31 11 0 0 11 3 7 12 3 3 46.87 24.55 74.75 1 2 4 Whitelist ESAD-UK 0.93 0.55 0 0 0.64 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 7 0.02 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 10 76962907 84442897 1 2 163 0 2 0 0 0 0.11 0.13 4 0 0 4 4 4 5 5 5 46.87 0.07 99.76 0 2 3 Whitelist ESAD-UK 0.54 0.32 0 0 0.48 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 4 0.01 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 11 NA NA 0 0 163 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.5 0 NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 12 24692902 70304340 1 4 163 1 2 1 0 0 0.57 0.19 7 0 0 7 3 4 14 4 4 46.87 32.71 63.5 0 3 4 Whitelist ESAD-UK 0.68 0.42 0 0 0.64 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 8 0.02 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 13 20816954 20828160 1 1 163 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 46.87 18.08 81.92 0 2 3 Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 2 0.01 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 14 NA NA 0 0 163 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.74 0 NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 15 NA NA 0 0 163 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.85 NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 16 77959755 79259730 1 4 163 1 3 0 0 0 0.11 0.63 9 0 0 9 4 5 11 5 5 46.87 99.89 0 0 4 3 Whitelist ESAD-UK 0.54 0.84 0 0 0.48 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 8 0.02 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 17 28399432 38648156 10 10 163 1 4 2 3 0 0.57 0 19 0 0 19 3 7 28 4 7 46.87 58.93 36.53 0 4 6 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 20 0.06 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 18 NA NA 0 0 163 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 19 NA NA 0 0 163 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.93 NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 20 NA NA 0 0 163 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 21 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 22 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 0 0 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-ST-041 X 28576898 29879940 1 1 163 1 0 0 0 0 0.39 0.07 2 0 NA NA NA NA 5 3 5 46.87 0.84 99.16 0 0 2 Whitelist ESAD-UK 0.62 0.21 0 NA 0.59 0 No ESAD-UK OCCAMS-ST-041 ESAD 0.52 2.4 Eso-AdenoCA NA 2 0.01 NA 8 ESAD-UK DO50399 OCCAMS-ST-041 male deceased C15.5 no treatment 75 567 567 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 18.65 ESAD-UK::OCCAMS-WG-001 1 39737864 144935673 5 5 151 3 0 1 1 0 0.28 1 2 0 0 NA NA NA 8 6 8 31.27 16.3 83.7 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 10 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 2 5499226 231177020 1 4 151 3 1 0 0 0 0.11 0.56 8 0 0 8 7 8 9 7 7 31.27 0.5 99.39 0 2 1 Whitelist ESAD-UK 0.54 0.78 0 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 8 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 3 269704 5196742 8 9 151 0 4 1 3 1 0.17 0.05 5 0 0 5 5 5 7 5 5 31.27 0.26 99.61 0 2 3 Whitelist ESAD-UK 0.54 0.17 0 0 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 17 0.06 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 4 87145480 190838384 1 5 151 3 1 0 0 1 0.11 0.25 4 0 0 4 3 4 4 3 3 31.27 99.79 0.02 0 1 0 Whitelist ESAD-UK 0.45 0.49 0 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 9 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 5 58530241 58600980 1 1 151 0 1 0 0 0 0.39 0.18 1 0 NA NA NA NA NA NA NA 31.27 25.94 71.39 0 2 NA Whitelist ESAD-UK 0.62 0.39 0 NA 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 6 157911842 158157549 1 1 151 0 1 0 0 0 0.39 0.61 2 0 NA NA NA NA 5 4 5 31.27 18.88 80.97 0 2 3 Whitelist ESAD-UK 0.62 0.82 0 NA 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 7 55037835 55668313 3 3 151 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 14 3 5 31.27 39.13 57.81 0 13 28 Whitelist ESAD-UK 0.87 0.01 0 0 0.84 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 6 0.02 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 8 NA NA 0 0 151 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.04 NA NA NA 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 9 NA NA 0 0 151 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.12 NA NA NA 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 10 2359962 106427653 1 5 151 1 2 0 0 2 0.3 1 1 0.08 0 NA NA NA NA NA NA 31.27 0 99.9 0 2 NA Whitelist ESAD-UK 0.62 1 0.08 0 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 8 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 11 66609753 70949094 13 13 151 3 2 4 4 0 0.84 0 14 0 0 14 3 4 25 3 3 31.27 58.99 40.46 1 8 6 Whitelist ESAD-UK 0.9 0 0 0 0.88 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 26 0.09 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 12 75730543 84721205 1 2 151 2 0 0 0 0 0.11 0.17 4 NA 0 4 4 4 5 5 5 31.27 0.83 99.09 0 1 2 Whitelist ESAD-UK 0.54 0.39 NA 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 13 63590029 83288852 1 2 151 2 0 0 0 0 0.11 0.18 4 NA 0 4 4 4 6 5 5 31.27 34.57 65.43 0 1 2 Whitelist ESAD-UK 0.54 0.4 NA 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 14 31718759 43661720 1 2 151 0 2 0 0 0 0.11 1 4 0 0 4 3 4 8 3 4 31.27 3.97 92.32 0 2 3 Whitelist ESAD-UK 0.54 1 0 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 15 87302016 87712618 5 7 151 2 2 0 1 2 0.53 0.01 4 0 0 4 3 4 7 4 4 31.27 14.72 85.15 0 2 1 Whitelist ESAD-UK 0.77 0.05 0 0 0.64 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 12 0.04 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 16 1472544 87592778 1 6 151 3 2 1 0 0 0.34 0.07 7 0 0 7 5 7 7 5 5 31.27 18.17 81.74 8 2 1 Whitelist ESAD-UK 0.62 0.2 0 0 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 12 0.04 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 17 20549700 75923156 7 7 151 2 1 2 2 0 0.93 0 10 0 0 10 6 6 11 6 6 31.27 33.19 66.81 0 2 1 Whitelist ESAD-UK 0.96 0.02 0 0 0.95 0 Low confidence ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA Canonical without polyploidization 14 0.05 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 18 11679404 23790970 4 4 151 1 2 1 0 0 0.57 0.02 9 0 0 9 3 4 11 3 4 31.27 76.12 18.73 0 2 3 Whitelist ESAD-UK 0.68 0.08 0 0 0.64 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 8 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 19 NA NA 0 0 151 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 20 49445566 49465742 1 1 151 0 0 0 1 0 0.39 0.78 2 NA NA NA NA NA 4 0 3 31.27 99.02 0 0 5 6 Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 21 35057675 42874887 1 2 151 2 0 0 0 0 0.11 0.71 4 NA 0 4 3 4 5 3 3 31.27 16.24 61.12 0 1 0 Whitelist ESAD-UK 0.54 0.9 NA 0 0.48 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 22 27592474 30176717 1 1 151 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 31.27 0 100 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 2 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-001 X 92336564 141296841 1 3 151 2 1 0 0 0 0.3 0.26 1 0 0 NA NA NA NA NA NA 31.27 99.91 0 3 1 NA Whitelist ESAD-UK 0.62 0.5 0 0 0.59 0 No ESAD-UK OCCAMS-WG-001 ESAD 0.53 1.91 Eso-AdenoCA NA 6 0.02 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50401 OCCAMS-WG-001 male alive C15.5 no treatment 77 1001 1001 Smoking history not documented 40 no None Included Eso-AdenoCA ESAD UK 1 32.93 ESAD-UK::OCCAMS-WG-002 1 20881283 56687624 4 5 138 0 1 1 2 1 0.57 0.2 8 0 0 8 4 7 18 4 7 38.41 41.33 58.66 0 1 2 Whitelist ESAD-UK 0.68 0.43 0 0 0.64 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 9 0.03 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 2 177387687 177537894 1 1 138 0 1 0 0 0 0.39 0.01 2 0.09 NA NA NA NA 5 3 3 38.41 5.08 92.05 0 2 3 Whitelist ESAD-UK 0.62 0.06 0.09 NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 3 94115085 94161922 3 3 138 3 0 0 0 0 0.03 0.5 2 0 0 NA NA NA 7 5 5 38.41 0.08 99.78 0 1 2 Whitelist ESAD-UK 0.41 0.75 0 0 0.33 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 4 NA NA 0 0 138 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.04 NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 5 146494000 172062115 5 7 138 0 1 2 2 2 0.53 0.16 11 0 0 11 11 11 17 12 12 38.41 81.37 15.95 0 2 1 Whitelist ESAD-UK 0.62 0.36 0 0 0.64 1 High confidence ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA Canonical without polyploidization 12 0.04 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 6 69629713 146587302 1 2 138 0 2 0 0 0 0.11 0.15 4 0 0 4 3 4 5 3 5 38.41 0.13 99.7 0 2 3 Whitelist ESAD-UK 0.54 0.35 0 0 0.48 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 7 103642939 103679610 1 1 138 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 38.41 0.02 99.75 0 1 2 Whitelist ESAD-UK 0.62 0.04 NA NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 8 47439415 115436068 1 2 138 0 1 0 1 0 0.57 1 3 0 0 NA NA NA 6 6 6 38.41 74.13 25.87 2 3 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 9 134621087 134665114 1 1 138 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 5 38.41 19.75 79.55 0 2 4 Whitelist ESAD-UK 0.62 0.16 NA NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 10 3206987 5050165 1 2 138 0 1 0 1 0 0.57 0.84 2 0.1 0 NA NA NA 12 6 6 38.41 36.99 62.83 0 2 3 Whitelist ESAD-UK 0.68 0.97 0.1 0 0.64 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 4 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 11 25843701 66594995 8 16 138 0 1 4 3 8 0.17 0 15 0 0 15 3 10 39 6 12 38.41 37.55 62.02 1 2 3 Whitelist ESAD-UK 16 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 24 0.09 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 12 92805792 93090529 1 1 138 0 1 0 0 0 0.39 0.42 2 0 NA NA NA NA 5 3 3 38.41 0.21 99.75 0 2 3 Whitelist ESAD-UK 0.62 0.67 0 NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 13 58346763 58425806 1 1 138 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 38.41 0.07 99.93 0 2 3 Whitelist ESAD-UK 0.62 0.59 NA NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 14 NA NA 0 0 138 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 15 57678315 57715705 1 1 138 0 0 0 1 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 38.41 56.29 43.71 0 1 2 Whitelist ESAD-UK 0.62 0.81 NA NA 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 2 0.01 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 16 4992496 26376025 2 9 138 1 0 1 0 7 0.57 0 22 0 0 22 5 9 37 6 10 38.41 65.21 29.85 6 2 3 Whitelist ESAD-UK 0.85 0 0 0 0.64 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 11 0.04 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 17 13347242 19869225 6 15 138 2 1 2 1 9 0.88 0 12 0 0 12 3 8 18 3 8 38.41 27.21 68.33 0 1 3 Whitelist ESAD-UK 0.93 0 0 0 0.91 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 21 0.08 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 18 28259792 60430892 1 3 138 1 2 0 0 0 0.3 0.42 6 0 0 6 3 4 10 3 4 38.41 95.22 0.13 0 1 6 Whitelist ESAD-UK 0.62 0.67 0 0 0.59 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 6 0.02 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 19 NA NA 0 0 138 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.08 0 NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 20 NA NA 0 0 138 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.63 NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 21 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 22 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-002 X NA NA 0 0 138 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.16 NA NA NA 1 No ESAD-UK OCCAMS-WG-002 ESAD 0.5 1.84 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50402 OCCAMS-WG-002 female deceased C15.5 no treatment 50 329 329 Current reformed smoker, duration not specified 5 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 10.82 ESAD-UK::OCCAMS-WG-005 1 8230794 175155977 1 7 277 4 1 1 0 1 0.11 0.15 13 0 0 13 7 8 14 7 9 44.16 42.75 57.25 0 2 1 Whitelist ESAD-UK 0.47 0.34 0 0 0.48 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 13 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 2 154340432 198833463 5 6 277 1 1 1 2 1 0.9 0 11 0 0 11 4 4 46 28 28 44.16 92.22 7.65 1 2 3 Whitelist ESAD-UK 0.93 0 0 0 0.92 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 11 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 3 121061285 121078100 2 2 277 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 25 11 13 44.16 1.28 98.6 0 2 NA Whitelist ESAD-UK 0.68 1 0 0 0.64 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 4 19241272 92212610 2 7 277 4 0 0 0 3 0.01 0.12 15 0 0 15 5 6 24 11 11 44.16 26.15 71.48 0 2 1 Whitelist ESAD-UK 0.41 0.3 0 0 0.16 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 11 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 5 12714338 161549623 1 7 277 7 0 0 0 0 0 0.14 11 0 0 11 11 11 11 11 11 44.16 0.84 99.03 0 2 1 Whitelist ESAD-UK 0.02 0.33 0 0 0.01 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 14 0.03 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 6 1656028 131872387 2 6 277 0 0 2 2 2 0.26 0.9 11 0 0 11 4 6 17 5 7 44.16 33.37 66.49 0 2 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 7 64499272 112538689 19 19 277 5 6 4 4 0 0.9 0 40 0 0 40 4 6 51 7 7 44.16 60.67 39.1 1 5 4 Whitelist ESAD-UK 0.93 0 0 0 0.92 0 Low confidence ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA With other complex events 38 0.07 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 8 65660880 135711762 2 6 277 4 0 0 0 2 0.01 0.27 19 0 0 19 4 8 35 7 7 44.16 79.98 16.59 2 3 4 Whitelist ESAD-UK 0.54 0.52 0 0 0.16 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 9 28898681 119907607 1 4 277 4 0 0 0 0 0.01 0.09 4 0 0 4 4 4 5 5 5 44.16 0.46 98.83 1 1 2 Whitelist ESAD-UK 0.21 0.24 0 0 0.16 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 10 113550458 114194412 2 2 277 0 1 0 1 0 0.57 0.04 1 0 0 NA NA NA 14 5 5 44.16 1.67 98.15 0 3 NA Whitelist ESAD-UK 0.68 0.15 0 0 0.64 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 11 31265661 128827728 1 10 277 6 0 0 1 3 0 0.39 18 0 0 18 4 9 21 4 6 44.16 79.58 16.83 0 4 3 Whitelist ESAD-UK 0.24 0.64 0 0 0.09 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 17 0.03 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 12 73554964 112159185 1 3 277 3 0 0 0 0 0.03 0.78 8 0 0 8 4 5 18 5 7 44.16 56.03 43.89 0 3 1 Whitelist ESAD-UK 0.41 0.93 0 0 0.33 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 13 67242450 67425275 2 2 277 2 0 0 0 0 0.11 0.41 3 0 0 NA NA NA 13 6 7 44.16 97.14 0.08 1 1 2 Whitelist ESAD-UK 0.54 0.65 0 0 0.48 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 14 28853291 80821918 1 4 277 3 1 0 0 0 0.11 0.49 5 0 0 5 3 5 7 3 3 44.16 9.2 87.09 0 2 1 Whitelist ESAD-UK 0.54 0.73 0 0 0.48 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 15 81901519 91025003 2 2 277 0 0 1 1 0 0.57 0.71 2 0 0 NA NA NA 4 3 3 44.16 13.6 86.4 0 2 3 Whitelist ESAD-UK 0.68 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 16 6150520 6711683 2 2 277 2 0 0 0 0 0.11 0.85 2 0 0 NA NA NA 5 3 5 44.16 0.82 99.05 0 1 2 Whitelist ESAD-UK 0.54 0.99 0 0 0.48 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 4 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 17 5696591 5794678 1 1 277 1 0 0 0 0 0.39 0.46 1 0.01 NA NA NA NA NA NA NA 44.16 99.72 0.24 0 2 NA Whitelist ESAD-UK 0.62 0.7 0.01 NA 0.59 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 18 7972777 70259187 1 8 277 3 0 0 0 5 0.03 0.57 11 0 0 11 4 11 13 5 5 44.16 58.3 37.05 0 2 3 Whitelist ESAD-UK 0.62 0.8 0 0 0.33 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 11 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 19 8048516 8170315 1 1 277 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 8 3 3 44.16 84.28 15.54 0 1 2 Whitelist ESAD-UK 0.62 0.97 0 NA 0.59 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 2 0 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 20 14698632 15209612 5 5 277 5 0 0 0 0 0 0.84 3 0 0 NA NA NA 6 3 5 44.16 98.22 0.79 0 2 3 Whitelist ESAD-UK 0.1 0.97 0 0 0.07 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 10 0.02 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 21 NA NA 0 0 277 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.52 NA NA NA 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 0 0 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 22 17807384 46929366 1 4 277 1 1 0 1 1 0.8 0.15 7 0 0 7 5 5 9 7 7 44.16 28.36 60.53 0 2 1 Whitelist ESAD-UK 0.68 0.35 0 0 0.84 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 7 0.01 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-005 X 7065891 121454827 1 9 277 7 0 0 0 2 0 0.34 1 0 0 NA NA NA NA NA NA 44.16 100 0 0 1 NA Whitelist ESAD-UK 4 0.02 0.59 0 0 0.01 0 No ESAD-UK OCCAMS-WG-005 ESAD 0.38 2.47 Eso-AdenoCA NA 16 0.03 frameshift_deletion,17_7577565_-_T,CN:3 2 ESAD-UK DO50403 OCCAMS-WG-005 male deceased C15.5 no treatment 58 557 557 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 18.32 ESAD-UK::OCCAMS-WG-006 1 91413192 240963456 1 2 55 0 1 1 0 0 0.57 0.32 1 NA 0 NA NA NA NA NA NA 5.67 0 100 0 2 NA Whitelist ESAD-UK 0.68 0.57 NA 0 0.64 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 2 23568338 41876072 1 1 55 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 5.67 0 99.9 0 2 NA Whitelist ESAD-UK 0.62 0.84 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 3 60329029 71151979 1 3 55 2 1 0 0 0 0.3 0.59 3 0 0 NA NA NA NA NA NA 5.67 0.07 99.79 0 2 3 Whitelist ESAD-UK 0.62 0.81 0 0 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 6 0.05 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 4 NA NA 0 0 55 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.4 NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 5 128198769 168497770 1 2 55 0 1 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 5.67 5.21 94.67 0 2 NA Whitelist ESAD-UK 0.68 1 NA 0 0.64 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 6 1604041 47609319 1 2 55 0 2 0 0 0 0.11 1 1 0.25 0.04 NA NA NA NA NA NA 5.67 0 99.85 0 2 NA Whitelist ESAD-UK 0.54 1 0.25 0.04 0.48 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 7 158258263 158324004 1 1 55 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 5.67 0 99.77 0 2 NA Whitelist ESAD-UK 0.62 0.93 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 8 12587277 69467235 1 7 55 1 3 2 0 1 0.34 0 17 0 0 17 4 8 24 4 8 5.67 6.38 93.62 0 2 4 Whitelist ESAD-UK 0.62 0 0 0 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 13 0.12 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 9 23402217 24777437 1 2 55 0 0 2 0 0 0.11 0.06 1 0 0 NA NA NA NA NA NA 5.67 0 99.3 0 2 NA Whitelist ESAD-UK 0.54 0.19 0 0 0.48 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 11 NA NA 0 0 55 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.76 NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 12 73194007 73264514 1 1 55 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.67 0 99.92 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 13 66579730 66594983 1 1 55 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.67 0 100 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 14 67546630 67570776 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.67 0 99.08 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 16 79037390 89575124 1 2 55 2 0 0 0 0 0.11 0.18 1 NA 0 NA NA NA NA NA NA 5.67 0.25 98.78 0 2 NA Whitelist ESAD-UK 0.54 0.4 NA 0 0.48 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 17 47608239 49595135 1 1 55 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.67 0 100 0 2 NA Whitelist ESAD-UK 0.62 1 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 2 0.02 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 18 21210571 22609154 1 2 55 0 0 2 0 0 0.11 0 4 0 0 4 0 3 9 4 4 5.67 3.05 96.9 0 3 4 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 4 0.04 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 20 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-006 X NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-WG-006 ESAD 0.95 1.96 Eso-AdenoCA NA 0 0 NA 2 ESAD-UK DO50405 OCCAMS-WG-006 male deceased C15.5 no treatment 66 249 249 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 no None Included Eso-AdenoCA ESAD UK 1 8.19 ESAD-UK::OCCAMS-WG-008 1 79436500 79803086 2 2 357 0 0 1 1 0 0.57 0.49 1 0 0 NA NA NA 30 11 11 49.64 47.67 52.33 0 2 NA Whitelist ESAD-UK 0.68 0.74 0 0 0.64 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 2 2469092 236636473 1 10 357 5 4 0 0 1 0.03 0.01 17 0 0 17 7 9 18 8 8 49.64 14.53 82.76 2 2 3 Whitelist ESAD-UK 0.41 0.06 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 3 9406366 148985299 9 13 357 2 2 3 2 4 0.95 0 36 0 0 36 9 36 52 12 12 49.64 1.93 94.6 0 2 1 Whitelist ESAD-UK 0.9 0 0 0 0.97 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 22 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 False positive; manually removed ESAD-UK::OCCAMS-WG-008 4 10386453 188335991 35 36 357 6 11 8 10 1 0.64 0 67 0 0 67 4 11 67 4 11 49.64 36.87 60.76 0 2 3 Whitelist ESAD-UK 0.68 0 0 0 0.72 0 Low confidence ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA With other complex events 71 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 5 13108816 166046630 1 3 357 0 3 0 0 0 0.03 0.19 18 0 0 18 5 13 21 5 7 49.64 85.75 11.55 0 3 1 Whitelist ESAD-UK 0.41 0.41 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 6 24415766 65407598 10 12 357 1 4 3 2 2 0.57 0.07 23 0 0 23 4 6 41 6 6 49.64 42.99 54.18 0 5 4 Whitelist ESAD-UK 0.93 0.21 0 0 0.64 0 Low confidence ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA With other complex events 22 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 7 110281430 110667869 3 3 357 3 0 0 0 0 0.03 0.05 9 0 0 9 8 9 30 8 10 49.64 99.41 0.37 1 1 2 Whitelist ESAD-UK 0.41 0.15 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 8 88133655 138319169 1 5 357 1 4 0 0 0 0.04 0.01 5 0 0 5 3 5 5 3 3 49.64 99.68 0.31 0 3 2 Whitelist ESAD-UK 0.45 0.03 0 0 0.36 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 9 37871655 79840911 1 2 357 1 1 0 0 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 49.64 11.04 88.26 0 2 NA Whitelist ESAD-UK 0.68 0.04 0 0 0.64 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 10 20636858 103789293 1 3 357 0 3 0 0 0 0.03 0 7 0 0 7 3 5 7 3 3 49.64 99.88 0 0 3 2 Whitelist ESAD-UK 0.41 0.01 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 11 1108535 80104666 1 11 357 2 5 0 0 4 0.02 0.71 4 0 0 4 3 4 5 3 3 49.64 99.55 0.02 1 3 2 Whitelist ESAD-UK 13 0.27 0.9 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 12 17551806 110418042 1 4 357 1 2 0 0 1 0.3 0.02 7 0 0 7 5 7 9 5 5 49.64 68.8 31.19 0 3 4 Whitelist ESAD-UK 0.54 0.09 0 0 0.59 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 13 52214952 85046099 1 7 357 2 2 0 0 3 0.26 0 18 0 0 18 4 8 29 5 7 49.64 88.74 11.26 0 3 4 Whitelist ESAD-UK 0.77 0.01 0 0 0.59 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 14 38004979 48842312 1 4 357 1 3 0 0 0 0.11 0.45 6 0 0 6 4 6 7 5 5 49.64 0.21 98.88 0 2 1 Whitelist ESAD-UK 0.54 0.69 0 0 0.48 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 15 27067177 27627705 1 2 357 0 2 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 49.64 0.02 99.98 0 2 3 Whitelist ESAD-UK 0.54 0.03 NA 0 0.48 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 16 78286734 89960823 1 9 357 5 2 0 0 2 0.02 0.14 14 0 0 14 5 10 22 5 14 49.64 99.26 0.21 1 3 1 Whitelist ESAD-UK 3 0.28 0.33 0 0 0.33 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 17 28928224 78094392 3 3 357 0 1 1 1 0 0.8 0.32 6 0 0 6 6 6 10 8 8 49.64 10.39 85.17 0 2 3 Whitelist ESAD-UK 0.87 0.58 0 0 0.84 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 18 NA NA 0 0 357 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.11 NA NA NA 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 19 19029755 58239966 3 3 357 0 1 1 1 0 0.8 0.7 7 0 0 7 3 4 10 3 4 49.64 59.31 31.91 0 4 5 Whitelist ESAD-UK 0.87 0.9 0 0 0.84 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 20 14564532 15312484 5 5 357 5 0 0 0 0 0 0 18 0 0 18 5 11 26 5 5 49.64 98.44 0.6 0 3 2 Whitelist ESAD-UK 0.1 0 0 0 0.07 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 21 19026250 24968076 1 4 357 0 4 0 0 0 0.01 0.63 6 0 0 6 6 6 8 8 8 49.64 7.24 70.12 0 2 3 Whitelist ESAD-UK 0.21 0.84 0 0 0.16 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 22 35618841 35651187 1 1 357 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 49.64 100 0 0 3 5 Whitelist ESAD-UK 0.62 0.34 NA NA 0.59 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-008 X 6894656 154973534 1 11 357 7 2 0 0 2 0 0.72 18 0 0 18 14 18 19 15 15 49.64 0.84 98.97 0 2 1 Whitelist ESAD-UK 13 0.13 0.9 0 0 0.08 0 No ESAD-UK OCCAMS-WG-008 ESAD 0.4 2.6 Eso-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 ESAD-UK DO50406 OCCAMS-WG-008 male alive C15.5 no treatment 74 767 767 Current reformed smoker, duration not specified 22 yes Daily Drinker Included Eso-AdenoCA ESAD UK 1 25.23 ESAD-UK::OCCAMS-WG-009 1 23720315 95301576 5 10 490 0 2 1 2 5 0.53 0 19 0 0 19 4 12 68 5 8 59.72 84.56 15.44 1 3 2 Whitelist ESAD-UK 0.62 0.01 0 0 0.64 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 15 0.02 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 2 85478953 232558623 14 22 490 2 4 3 5 8 0.7 0 51 0 0 51 11 19 77 16 16 59.72 99.46 0.47 0 4 3 Whitelist ESAD-UK 11_12 0.62 0 0 0 0.78 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 36 0.04 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 False positive; manually removed ESAD-UK::OCCAMS-WG-009 3 5019418 175187404 1 28 490 7 9 0 0 12 0 1 46 0 0 46 6 20 49 6 7 59.72 75.63 24.25 0 3 4 Whitelist ESAD-UK 11_17 0.41 1 0 0 0.05 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 44 0.04 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 4 185160583 185567937 2 2 490 0 2 0 0 0 0.11 0 4 0 0 4 0 3 22 5 9 59.72 5.32 94.64 0 2 3 Whitelist ESAD-UK 0.54 0 0 0 0.48 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 5 29485904 127307397 1 16 490 4 7 0 0 5 0.01 0.58 17 0 0 17 8 8 26 8 9 59.72 47.31 52.54 0 3 2 Whitelist ESAD-UK 0.41 0.8 0 0 0.16 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 27 0.03 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 6 41236083 41648277 2 3 490 0 2 0 0 1 0.11 0.5 5 0 0 5 0 3 42 5 10 59.72 48.32 51.53 0 8 11 Whitelist ESAD-UK 0.62 0.75 0 0 0.48 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 5 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 7 1524679 156742340 1 30 490 4 13 0 0 13 0 0.37 41 0 0 41 5 16 42 5 8 59.72 48.26 51.52 0 4 3 Whitelist ESAD-UK 0.16 0.62 0 0 0 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 47 0.05 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 8 35677304 145973939 1 10 490 2 2 0 2 4 0.57 0.04 17 0 0 17 5 6 21 5 6 59.72 34.53 61.78 0 2 3 Whitelist ESAD-UK 17_3_5 0.86 0.14 0 0 0.64 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 16 0.02 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 9 15243337 15458337 2 2 490 1 1 0 0 0 0.57 0.41 3 0 0 NA NA NA 16 3 8 59.72 34.29 63.17 0 2 3 Whitelist ESAD-UK 0.68 0.66 0 0 0.64 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 10 4579401 102025657 1 19 490 3 10 0 0 6 0 0.75 21 0 0 21 7 14 24 7 8 59.72 57.61 42.21 0 3 2 Whitelist ESAD-UK 17 0.51 0.91 0 0 0.01 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 32 0.03 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 11 7867256 37730507 8 12 490 3 2 2 1 4 0.8 0 16 0 0 16 7 11 59 10 18 59.72 53.5 46.07 0 4 3 Whitelist ESAD-UK 0.68 0 0 0 0.84 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 20 0.02 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 False positive; manually removed ESAD-UK::OCCAMS-WG-009 12 1575828 123594122 2 19 490 2 1 1 2 13 0.88 0.01 42 0 0 42 6 7 45 7 8 59.72 55.53 44.38 0 3 4 Whitelist ESAD-UK 15_17_2 0.87 0.05 0 0 0.91 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 25 0.03 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 13 44852883 45003407 2 2 490 0 2 0 0 0 0.11 0 4 0 0 4 3 4 11 3 3 59.72 100 0 0 4 3 Whitelist ESAD-UK 0.54 0.02 0 0 0.48 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 4 0 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 14 67831387 71889927 3 3 490 1 1 0 1 0 0.8 0.36 6 0 0 6 3 4 19 4 6 59.72 98.66 1.13 0 3 2 Whitelist ESAD-UK 0.87 0.62 0 0 0.84 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 6 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 15 60577261 91952260 1 9 490 0 4 0 0 5 0.01 0.78 13 0 0 13 5 9 18 7 14 59.72 70.14 29.78 0 4 3 Whitelist ESAD-UK 12 0.62 0.94 0 0 0.16 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 13 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 16 19263889 67872860 1 9 490 0 4 0 0 5 0.01 0.78 10 0 0 10 5 10 16 5 15 59.72 1.9 98.01 0 2 4 Whitelist ESAD-UK 5 0.12 0.93 0 0 0.16 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 13 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 17 28749738 71397421 5 14 490 1 4 0 0 9 0.04 0 33 0 0 33 7 10 62 8 9 59.72 75.15 19.65 1 4 3 Whitelist ESAD-UK 10_12 0.54 0 0 0 0.36 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 19 0.02 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 False positive; manually removed ESAD-UK::OCCAMS-WG-009 18 2404184 10696515 5 5 490 1 1 2 1 0 0.9 0 14 0 0 14 6 12 32 7 10 59.72 91.47 2.87 0 8 9 Whitelist ESAD-UK 0.93 0.03 0 0 0.92 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 10 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 19 1710473 50936622 2 17 490 0 1 1 0 15 0.57 0 31 0 0 31 10 17 37 10 10 59.72 71.47 20.88 0 2 3 Whitelist ESAD-UK 17_18 0.99 0 0 0 0.64 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 19 0.02 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 20 17259378 18286116 3 5 490 0 3 0 0 2 0.03 0.02 5 0 0 5 0 3 27 3 4 59.72 62.53 29.76 0 2 3 Whitelist ESAD-UK 16 0.45 0.07 0 0 0.33 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 8 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 21 42090950 45836898 1 11 490 1 2 0 0 8 0.3 0.06 8 0 0 8 4 8 9 4 4 59.72 3.96 73.39 0 2 3 Whitelist ESAD-UK 3_7 0.87 0.18 0 0 0.59 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 14 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 22 24447127 50708748 1 23 490 2 5 2 0 14 0.13 0 24 0 0 24 4 7 26 4 5 59.72 52.1 46.74 0 3 4 Whitelist ESAD-UK 10_18_19_2 0.62 0 0 0 0.55 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 32 0.03 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-009 X 6648732 106451026 1 5 490 2 3 0 0 0 0.14 0 8 0.01 0 8 8 8 9 9 9 59.72 99.62 0.38 0 1 2 Whitelist ESAD-UK 0.62 0 0.02 0 0.59 0 No ESAD-UK OCCAMS-WG-009 ESAD 0.25 2.63 Eso-AdenoCA NA 10 0.01 frameshift_deletion,17_7578213_-_AA,CN:2 4 ESAD-UK DO50407 OCCAMS-WG-009 male deceased C15.5 no treatment 65 84 84 Current reformed smoker, duration not specified 1 no None Included Eso-AdenoCA ESAD UK 1 2.76 ESAD-UK::OCCAMS-WG-019 1 21179975 246644364 1 12 263 4 5 1 0 2 0.08 0.25 23 0 0 23 4 6 24 4 6 85.92 99.93 0.06 1 5 3 Whitelist ESAD-UK 0.54 0.49 0 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 2 51574118 151508620 1 7 263 0 3 1 0 3 0.11 0.32 12 0 0 12 4 4 16 4 4 85.92 94.53 5.35 0 4 8 Whitelist ESAD-UK 0.62 0.57 0 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 3 141401836 162710998 5 6 263 0 3 0 2 1 0.14 0.05 7 0 0 7 3 5 25 4 6 85.92 96.6 0.03 0 4 5 Whitelist ESAD-UK 0.54 0.17 0 0 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 4 162107439 177548501 1 2 263 0 2 0 0 0 0.11 0.11 2 0 0 NA NA NA 7 4 6 85.92 79.15 20.66 0 3 4 Whitelist ESAD-UK 0.54 0.28 0 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 5 23758800 130844965 1 8 263 0 4 1 0 3 0.04 0.61 18 0 0 18 4 6 20 4 4 85.92 67.45 29.88 1 5 6 Whitelist ESAD-UK 0.62 0.83 0 0 0.36 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 6 18740622 21421268 8 8 263 2 2 2 2 0 1 0.04 5 0 0 5 5 5 19 7 7 85.92 94.25 2.93 1 4 5 Whitelist ESAD-UK 1 0.13 0 0 1 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 7 110438279 157589033 1 4 263 3 0 0 0 1 0.03 0.13 6 0 0 6 3 4 14 3 6 85.92 97.34 0.11 0 2 4 Whitelist ESAD-UK 0.54 0.32 0 0 0.33 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 8 11621919 129269031 20 27 263 5 3 5 7 7 0.66 0 56 0 0 56 7 13 72 7 13 85.92 93.15 3.42 0 6 4 Whitelist ESAD-UK 0.62 0 0 0 0.74 1 High confidence ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA With other complex events 47 0.09 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 9 21753498 27709359 4 9 263 1 0 2 1 5 0.57 0.01 6 0 0 6 5 6 17 5 8 85.92 86.71 13.12 0 2 3 Whitelist ESAD-UK 0.62 0.05 0 0 0.64 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 10 NA NA 0 0 263 0 0 0 0 0 NA 0.66 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.87 0 NA NA 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 11 5561916 111543825 1 9 263 3 1 1 0 4 0.28 0.1 26 0 0 26 4 5 30 4 6 85.92 95.89 0 0 5 4 Whitelist ESAD-UK 0.62 0.27 0 0 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 12 40957288 41027794 1 1 263 0 1 0 0 0 0.39 0.24 1 0 NA NA NA NA 9 8 9 85.92 96.26 0 0 4 NA Whitelist ESAD-UK 0.62 0.48 0 NA 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 13 NA NA 0 0 263 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 1 0 NA NA 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 14 41587098 103853980 1 2 263 2 0 0 0 0 0.11 0.37 3 0 0 NA NA NA 4 4 4 85.92 84.09 0 0 4 3 Whitelist ESAD-UK 0.54 0.62 0 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 15 26580601 42421729 1 3 263 0 0 0 1 2 0.39 1 3 0 0 NA NA NA 8 6 6 85.92 83.95 0.64 0 4 3 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 16 22048462 78779407 1 8 263 3 1 1 1 2 0.57 0.44 10 0 0 10 4 6 11 4 4 85.92 99.9 0 0 3 4 Whitelist ESAD-UK 0.87 0.69 0 0 0.64 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 17 12163699 12257693 1 1 263 0 1 0 0 0 0.39 0.85 2 0.01 NA NA NA NA 9 3 4 85.92 93.39 2.17 0 3 4 Whitelist ESAD-UK 0.62 0.98 0.01 NA 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 18 NA NA 0 0 263 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.17 NA NA NA 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 19 7790563 54794653 1 4 263 1 3 0 0 0 0.11 0.82 6 0.03 0 6 3 5 6 3 5 85.92 92.71 0 0 4 5 Whitelist ESAD-UK 0.54 0.96 0.03 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 20 8080539 61550758 1 5 263 0 2 0 0 3 0.11 1 7 0 0 7 3 6 8 3 4 85.92 99.69 0 1 6 4 Whitelist ESAD-UK 0.68 1 0 0 0.48 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 21 36183330 44280114 1 2 263 1 1 0 0 0 0.57 0.26 4 0 0 4 0 3 9 3 3 85.92 69.35 8 0 0 2 Whitelist ESAD-UK 0.68 0.5 0 0 0.64 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 22 19029126 35393404 1 5 263 2 1 0 0 2 0.3 0.14 5 0 0 5 3 5 6 3 3 85.92 76.01 0.22 0 3 4 Whitelist ESAD-UK 0.62 0.33 0 0 0.59 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-WG-019 X 11012297 98760139 1 4 263 1 2 0 1 0 0.57 0.26 4 0 0 4 3 4 4 3 4 85.92 100 0 4 1 0 Whitelist ESAD-UK 0.68 0.5 0 0 0.64 1 No ESAD-UK OCCAMS-WG-019 ESAD 0.25 3.97 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 4 ESAD-UK DO50408 OCCAMS-WG-019 male alive C15.5 no treatment 57 1059 1059 Current smoker (includes daily smokers non-daily/occasional smokers) 1 yes Occassional Drinker (< once a month) Included Eso-AdenoCA ESAD UK 1 34.84 ESAD-UK::OCCAMS-ZZ-004 1 NA NA 0 0 323 0 0 0 0 0 NA 0 NA 0.02 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 0.02 NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 2 40011083 204228582 1 8 323 2 1 0 0 5 0.3 0 3 0 0 NA NA NA 4 4 4 32.59 83.78 16.12 1 3 2 Whitelist ESAD-UK 6 0.87 0 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 11 0.02 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 3 79151724 171586622 25 26 323 4 8 6 7 1 0.71 0 38 0 0 38 10 12 49 10 11 32.59 59.98 39.97 1 3 2 Whitelist ESAD-UK 0.68 0 0 0 0.78 1 High confidence ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA With other complex events 51 0.08 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 4 NA NA 0 0 323 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 5 NA NA 0 0 323 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 0 NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 6 28162526 168904470 2 16 323 1 0 1 2 12 0.57 0 40 0 0 40 5 6 47 5 6 32.59 34.07 65.76 2 6 2 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 20 0.03 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 7 110588752 127733489 1 2 323 2 0 0 0 0 0.11 0 4 0 0 4 4 4 6 5 5 32.59 39.04 60.74 0 1 2 Whitelist ESAD-UK 0.54 0.02 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 8 8960637 125604409 7 47 323 3 1 1 2 40 0.67 0 31 0 0 31 5 12 33 5 5 32.59 65.93 34.07 0 4 3 Whitelist ESAD-UK 0.68 0 0 0 0.74 1 Low confidence ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA With other complex events 54 0.08 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 9 21963034 22024255 1 1 323 0 0 0 1 0 0.39 0 2 NA NA NA NA NA NA NA NA 32.59 0.04 99.82 0 1 2 Whitelist ESAD-UK 0.62 0 NA NA 0.59 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 2 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 10 364377 35292358 4 9 323 0 2 1 1 5 0.57 0.89 11 0 0 11 5 8 13 5 9 32.59 21.98 74.63 0 1 3 Whitelist ESAD-UK 13 0.68 1 0 0 0.64 1 Linked to high confidence ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA With other complex events 13 0.02 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 11 NA NA 0 0 323 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 12 28350164 31489188 1 4 323 1 0 1 0 2 0.57 0.79 7 0 0 7 0 4 14 3 3 32.59 24.23 71.46 0 4 6 Whitelist ESAD-UK 0.62 0.94 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 6 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 13 22419265 109068331 32 41 323 4 12 8 8 9 0.26 0 56 0 0 56 8 15 57 8 9 32.59 44.92 55.08 1 3 4 Whitelist ESAD-UK 10 0.62 0 0 0 0.59 1 High confidence ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA With other complex events 73 0.11 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 14 22899463 27108658 38 70 323 8 6 12 12 32 0.42 0 7 0 0 7 6 7 16 6 6 32.59 33.65 63.27 0 4 5 Whitelist ESAD-UK 8 0.62 0 0 0 0.62 1 Low confidence ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA After polyploidization 108 0.17 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 15 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 16 77799068 78654825 1 2 323 1 1 0 0 0 0.57 0.12 2 0 0 NA NA NA 5 4 5 32.59 11.87 88.03 0 2 3 Whitelist ESAD-UK 0.68 0.31 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 17 32681118 51712236 4 7 323 0 1 0 3 3 0.11 0.04 3 0 0 NA NA NA 11 4 8 32.59 69.99 25.58 0 2 3 Whitelist ESAD-UK 10 0.62 0.13 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 11 0.02 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 18 13163191 13371833 1 1 323 0 1 0 0 0 0.39 0.86 2 0 NA NA NA NA 10 3 5 32.59 85.04 14.93 0 2 3 Whitelist ESAD-UK 0.62 0.99 0 NA 0.59 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 2 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 19 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 20 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 21 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 22 46364763 46823424 2 2 323 0 0 1 1 0 0.57 0.8 2 0 0 NA NA NA 5 3 5 32.59 44.01 55.99 0 1 2 Whitelist ESAD-UK 0.68 0.95 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 4 0.01 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-004 X NA NA 0 0 323 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-004 ESAD 0.56 2.11 Eso-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 2 ESAD-UK DO50409 OCCAMS-ZZ-004 male deceased C15.5 no treatment 67 580 580 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 19.08 ESAD-UK::OCCAMS-ZZ-009 1 2485334 247277615 1 14 353 5 0 2 1 6 0.07 0.2 16 0 0 16 7 12 17 7 12 36.65 60.73 39.27 0 1 3 Whitelist ESAD-UK 12_3 0.62 0.42 0 0 0.48 0 Linked to low confidence ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA With other complex events 22 0.03 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 2 19685801 213542481 1 7 353 2 0 0 0 5 0.11 0.04 10 0 0 10 5 10 11 5 5 36.65 0.35 99.54 0 2 1 Whitelist ESAD-UK 3 0.68 0.15 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 9 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 3 53941143 82443001 2 2 353 0 1 0 1 0 0.57 0 17 0 0 17 8 17 46 8 8 36.65 53.38 43.54 0 2 1 Whitelist ESAD-UK 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 4 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 4 NA NA 0 0 353 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0 NA NA NA 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 0 0 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 5 55275132 142680921 1 11 353 3 0 0 1 7 0.11 0.91 7 0 0 7 4 4 10 5 5 36.65 49.23 50.64 0 1 2 Whitelist ESAD-UK 3 0.87 1 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 15 0.02 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 6 17756462 48463798 1 5 353 2 1 0 0 2 0.3 0.01 4 0 0 4 3 4 9 3 5 36.65 0.3 99.56 0 2 0 Whitelist ESAD-UK 12 0.93 0.04 0 0 0.59 0 Linked to low confidence ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA Canonical without polyploidization 8 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 7 9481951 111188434 1 9 353 5 0 0 0 4 0 1 13 0 0 13 7 13 14 7 7 36.65 0.77 99.01 0 2 1 Whitelist ESAD-UK 3 0.54 1 0 0 0.07 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 14 0.02 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 8 14232340 47730450 3 4 353 2 0 0 1 1 0.3 0 10 0 0 10 3 4 40 11 13 36.65 96.16 0.29 0 1 3 Whitelist ESAD-UK 0.54 0.01 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 7 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 9 21761926 22162374 2 2 353 2 0 0 0 0 0.11 0.41 4 0 0 4 3 4 17 7 7 36.65 1.67 97.63 0 1 0 Whitelist ESAD-UK 0.54 0.65 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 4 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 10 3117596 81060475 1 8 353 1 0 0 1 6 0.57 0.7 9 0 0 9 6 8 13 7 7 36.65 16.51 83.31 0 1 2 Whitelist ESAD-UK 5 0.68 0.9 0 0 0.64 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 10 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 11 1026603 90690594 1 6 353 5 1 0 0 0 0.01 0.13 11 0 0 11 6 6 17 7 8 36.65 0.9 98.68 0 1 2 Whitelist ESAD-UK 0.25 0.32 0 0 0.19 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 12 0.02 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 12 15448042 117609293 82 90 353 13 19 22 28 8 0.13 0 110 0 0 110 6 10 113 6 6 36.65 69.15 30.72 4 3 2 Whitelist ESAD-UK 1 0.54 0 0 0 0.54 0 Low confidence ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA With other complex events 172 0.24 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 13 54745417 114256304 1 5 353 3 0 0 0 2 0.03 0.08 7 0 0 7 4 6 11 4 6 36.65 29.74 69.97 0 2 0 Whitelist ESAD-UK 0.62 0.22 0 0 0.33 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 8 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 14 64607191 64620843 1 1 353 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA 6 4 4 36.65 61.6 37.49 0 2 3 Whitelist ESAD-UK 0.62 0.45 0 NA 0.59 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 2 0 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 15 25614237 25701962 3 3 353 2 1 0 0 0 0.3 0.03 4 0 0 4 0 4 7 4 4 36.65 0.1 99.9 0 0 1 Whitelist ESAD-UK 0.62 0.12 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 6 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 16 14176787 87458987 1 14 353 8 4 0 0 2 0 0.04 25 0 0 25 13 21 30 15 15 36.65 4.02 95.89 0 2 1 Whitelist ESAD-UK 0.13 0.15 0 0 0.08 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 26 0.04 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 17 NA NA 0 0 353 0 0 0 0 0 NA 0.74 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.91 0 NA NA 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 0 0 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 18 6372819 13511810 1 2 353 1 1 0 0 0 0.57 0.18 6 0.02 0 6 3 4 13 3 3 36.65 73.72 21.33 0 6 2 Whitelist ESAD-UK 0.68 0.4 0.02 0 0.64 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 4 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 19 1115478 38256467 1 4 353 3 0 0 0 1 0.03 0.85 7 0 0 7 7 7 8 7 7 36.65 2.9 96.93 0 2 1 Whitelist ESAD-UK 0.54 0.98 0 0 0.33 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 7 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 20 5582748 55087489 1 5 353 3 1 0 0 1 0.11 0.06 13 0 0 13 4 8 14 4 8 36.65 24.05 68.93 0 2 3 Whitelist ESAD-UK 0.45 0.19 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 9 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 21 32553621 32788746 1 1 353 1 0 0 0 0 0.39 0.63 2 0 NA NA NA NA NA NA NA 36.65 0.49 76.86 0 1 2 Whitelist ESAD-UK 0.62 0.84 0 NA 0.59 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 2 0 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 22 NA NA 0 0 353 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.33 NA NA NA 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 0 0 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-009 X 44743360 117334311 1 2 353 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 36.65 100 0 0 1 NA Whitelist ESAD-UK 0.54 0.01 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-009 ESAD 0.44 2.04 Eso-AdenoCA NA 4 0.01 NA 21 ESAD-UK DO50410 OCCAMS-ZZ-009 male deceased C15.5 no treatment 76 386 386 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 12.7 ESAD-UK::OCCAMS-ZZ-011 1 26226552 248157971 1 12 147 6 6 0 0 0 0.01 0.17 18 0 0 18 8 18 21 9 9 35.56 5.7 93.99 0 2 1 Whitelist ESAD-UK 0.21 0.38 0 0 0.16 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 24 0.08 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 2 5124853 173424643 1 6 147 1 2 1 0 2 0.57 0.55 8 0 0 8 3 8 9 3 3 35.56 21.45 78.41 0 2 1 Whitelist ESAD-UK 0.93 0.78 0 0 0.64 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 3 60298258 89184810 2 4 147 2 1 1 0 0 0.57 0.07 8 0 0 8 5 5 13 5 5 35.56 0.39 99.56 0 2 1 Whitelist ESAD-UK 0.68 0.22 0 0 0.64 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 4 206786 74881938 1 4 147 0 2 0 1 1 0.3 0.74 3 0 0 NA NA NA 4 4 4 35.56 99.08 0.91 0 2 1 Whitelist ESAD-UK 0.62 0.91 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 5 39118349 44268217 2 10 147 1 1 3 1 4 0.57 0 13 0 0 13 3 4 22 3 4 35.56 75.63 21.57 5 15 22 Whitelist ESAD-UK 6 0.68 0 0 0 0.64 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 16 0.05 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 6 68385936 162693706 1 6 147 4 2 0 0 0 0.06 0.6 9 0 0 9 5 9 10 5 5 35.56 1.18 98.57 0 2 1 Whitelist ESAD-UK 0.54 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 7 17338312 153289196 1 5 147 1 4 0 0 0 0.04 1 8 0 0 8 6 8 10 6 6 35.56 28.41 71.55 0 2 1 Whitelist ESAD-UK 0.45 1 0 0 0.36 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 8 4939443 115183123 1 5 147 2 3 0 0 0 0.14 0.85 7 0 0 7 3 5 8 3 5 35.56 99.88 0 0 3 0 Whitelist ESAD-UK 0.62 0.98 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 9 3529800 140745580 2 6 147 0 4 0 0 2 0.01 0 15 0 0 15 6 8 19 9 9 35.56 89.14 8.31 1 3 1 Whitelist ESAD-UK 0.25 0 0 0 0.16 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 10 25751612 25870184 1 1 147 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 35.56 0.09 99.8 0 2 3 Whitelist ESAD-UK 0.62 0.07 NA NA 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 11 20288235 81414348 1 2 147 0 2 0 0 0 0.11 0.07 4 NA 0 4 4 4 5 5 5 35.56 0.25 99.61 0 2 3 Whitelist ESAD-UK 0.54 0.21 NA 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 12 45092590 132513999 1 2 147 1 1 0 0 0 0.57 0.56 3 0.06 0 NA NA NA NA NA NA 35.56 0.27 99.59 1 2 1 Whitelist ESAD-UK 0.68 0.79 0.06 0 0.64 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 13 71961794 71971886 1 1 147 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 35.56 83.07 2.78 0 3 NA Whitelist ESAD-UK 0.62 0.74 NA NA 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 14 NA NA 0 0 147 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.26 NA NA NA 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 15 23045491 59567085 1 4 147 0 2 0 0 2 0.11 0.61 2 0 0 NA NA NA NA NA NA 35.56 0.03 83.84 0 2 3 Whitelist ESAD-UK 0.68 0.82 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 16 17377324 79315094 1 2 147 0 2 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 35.56 0.2 99.71 0 2 3 Whitelist ESAD-UK 0.54 0.69 NA 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 17 NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 18 7484161 23051622 1 1 147 0 1 0 0 0 0.39 0.8 4 0 0 4 4 4 5 5 5 35.56 88.47 6.89 2 1 2 Whitelist ESAD-UK 0.62 0.95 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 19 1846713 19907018 1 2 147 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 35.56 0.23 99.59 0 2 3 Whitelist ESAD-UK 0.54 1 NA 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 20 31333854 57724128 1 3 147 0 3 0 0 0 0.03 1 4 0 0 4 4 4 5 5 5 35.56 99.9 0 0 3 4 Whitelist ESAD-UK 0.41 1 0 0 0.33 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 21 40182202 40625958 2 2 147 0 2 0 0 0 0.11 0.11 4 0 0 4 0 3 8 3 3 35.56 40.59 29.42 0 2 3 Whitelist ESAD-UK 0.54 0.28 0 0 0.48 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 22 NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-011 X 7027798 98454462 1 6 147 2 3 0 0 1 0.14 0.71 5 0 0 5 5 5 5 5 5 35.56 99.58 0.11 0 1 2 Whitelist ESAD-UK 0.54 0.9 0 0 0.59 0 No ESAD-UK OCCAMS-ZZ-011 ESAD 0.63 1.91 Eso-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:2 2 ESAD-UK DO50411 OCCAMS-ZZ-011 male deceased C15.5 no treatment 72 305 305 Smoking history not documented NA no None Included Eso-AdenoCA ESAD UK 1 10.03 ESAD-UK::OCCAMS-ZZ-016 1 8532605 246645743 1 11 286 6 1 0 0 4 0 0.19 13 0 0 13 7 11 13 7 9 29.51 0.37 99.63 0 2 1 Whitelist ESAD-UK 3_9 0.34 0.41 0 0 0.09 1 Linked to high confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 2 57948160 58345283 2 2 286 2 0 0 0 0 0.11 0.34 1 0 0 NA NA NA 14 5 7 29.51 5.1 92.21 0 2 NA Whitelist ESAD-UK 0.54 0.59 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 3 35278145 141335185 4 11 286 1 1 1 1 7 1 0 14 0 0 14 7 14 32 7 7 29.51 13.32 86.65 0 1 2 Whitelist ESAD-UK 0.74 0 0 0 1 1 High confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 15 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 4 13270280 163346042 1 9 286 6 1 0 2 0 0.03 0.1 20 0 0 20 4 20 22 4 4 29.51 26.32 71.31 4 2 1 Whitelist ESAD-UK 0.41 0.26 0 0 0.33 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 5 4358956 164489851 1 15 286 8 2 1 1 3 0.01 1 20 0 0 20 13 13 22 13 13 29.51 30.77 69.11 1 2 1 Whitelist ESAD-UK 6 0.36 1 0 0 0.19 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 27 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 6 45113338 163013852 2 10 286 5 1 0 0 4 0.01 0.17 31 0 0 31 7 20 35 8 8 29.51 28.96 70.89 0 2 3 Whitelist ESAD-UK 5 0.54 0.38 0 0 0.19 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 7 16983311 102542434 6 13 286 1 1 1 3 7 0.57 0 38 0 0 38 6 6 47 6 7 29.51 30.08 69.69 0 2 3 Whitelist ESAD-UK 0.8 0 0 0 0.64 1 Low confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 19 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 8 17578620 128337116 1 13 286 4 2 1 0 6 0.17 0.79 10 0 0 10 4 7 10 4 4 29.51 67.08 29.4 1 4 2 Whitelist ESAD-UK 3 0.62 0.94 0 0 0.59 1 Linked to high confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 20 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 9 76261765 114813733 1 4 286 1 0 2 0 1 0.3 0.13 6 0 0 6 5 6 8 6 7 29.51 49.21 48.22 0 3 4 Whitelist ESAD-UK 0.62 0.32 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 10 126258325 131079044 5 8 286 3 0 2 0 3 0.14 0.01 16 0 0 16 0 3 35 9 9 29.51 11.92 87.96 0 2 1 Whitelist ESAD-UK 3 0.41 0.05 0 0 0.59 1 Linked to high confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 13 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 11 18628559 91838944 1 8 286 5 0 0 0 3 0 0.57 18 0 0 18 7 14 25 11 11 29.51 66.1 33.57 1 3 2 Whitelist ESAD-UK 0.54 0.8 0 0 0.07 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 12 6956019 112325920 1 8 286 6 2 0 0 0 0.01 0.67 15 0 0 15 7 10 19 7 7 29.51 87.21 9.05 1 3 2 Whitelist ESAD-UK 0.21 0.88 0 0 0.16 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 13 113185880 113395526 1 1 286 0 1 0 0 0 0.39 0.07 2 0 NA NA NA NA NA NA NA 29.51 0.18 99.82 0 2 3 Whitelist ESAD-UK 0.62 0.21 0 NA 0.59 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 14 20789516 40354488 1 4 286 1 2 0 1 0 0.57 0.23 6 0 0 6 6 6 8 7 8 29.51 0.2 96.09 0 2 3 Whitelist ESAD-UK 0.68 0.47 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 15 NA NA 0 0 286 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.43 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 16 89429134 89446606 2 2 286 2 0 0 0 0 0.11 0.2 1 0 0 NA NA NA 11 5 7 29.51 98.71 0.43 0 4 NA Whitelist ESAD-UK 0.54 0.42 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 17 2088600 25571414 14 14 286 3 4 3 4 0 0.96 0 13 0 0 13 6 8 21 6 8 29.51 42.16 53.39 1 2 1 Whitelist ESAD-UK 0.98 0 0 0 0.98 1 Low confidence ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA With other complex events 28 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 18 NA NA 0 0 286 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.04 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 19 41045556 41218813 1 1 286 0 1 0 0 0 0.39 0.83 2 0 NA NA NA NA 4 3 3 29.51 79.6 20.22 0 3 5 Whitelist ESAD-UK 0.62 0.97 0 NA 0.59 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 20 14372023 15079746 2 2 286 2 0 0 0 0 0.11 0.01 6 0 0 6 6 6 14 7 7 29.51 88.69 3.63 0 0 1 Whitelist ESAD-UK 0.54 0.05 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 21 18768105 36260803 1 5 286 2 3 0 0 0 0.14 0.41 6 0 0 6 5 6 7 5 5 29.51 0.51 76.84 0 2 1 Whitelist ESAD-UK 0.62 0.66 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 22 42793174 43242779 1 2 286 1 0 1 0 0 0.57 0.16 4 0 0 4 3 4 12 9 10 29.51 73.37 15.52 0 1 0 Whitelist ESAD-UK 0.68 0.37 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-016 X 121172485 121458441 3 3 286 0 1 1 1 0 0.8 0.34 6 0 0 6 6 6 28 15 15 29.51 16.4 83.6 0 1 2 Whitelist ESAD-UK 0.87 0.59 0 0 0.84 1 No ESAD-UK OCCAMS-ZZ-016 ESAD 0.5 2.45 Eso-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 3 ESAD-UK DO50316 OCCAMS-ZZ-016 male deceased C15.5 no treatment 56 1269 1269 Smoking history not documented NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 41.74 ESAD-UK::OCCAMS-ZZ-019 1 15928183 238971867 1 13 190 3 4 1 1 4 0.39 0.28 21 0 0 21 3 6 22 3 7 68.01 54.52 42.5 0 3 4 Whitelist ESAD-UK 0.68 0.52 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 22 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 2 102616020 238846803 1 5 190 3 2 0 0 0 0.14 0.15 8 0 0 8 3 5 11 3 5 68.01 99.83 0.08 0 3 1 Whitelist ESAD-UK 0.62 0.35 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 3 60331775 60647764 2 2 190 2 0 0 0 0 0.11 0.01 6 0 0 6 4 5 24 4 6 68.01 97.15 2.7 0 0 2 Whitelist ESAD-UK 0.54 0.05 0 0 0.48 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 4 15934512 138883629 1 26 190 0 2 1 0 23 0.3 0 13 0 0 13 3 9 19 4 9 68.01 27.92 71.86 0 2 0 Whitelist ESAD-UK 20 0.62 0 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 29 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 5 54890695 171491811 11 11 190 3 4 3 1 0 0.63 0.01 25 0 0 25 18 25 29 19 26 68.01 73.86 26.01 0 2 4 Whitelist ESAD-UK 0.74 0.03 0 0 0.71 1 High confidence ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA Before polyploidization 22 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 6 2222241 92681243 1 3 190 1 2 0 0 0 0.3 0.02 6 0 0 6 3 5 8 3 5 68.01 87.49 12.33 0 3 0 Whitelist ESAD-UK 0.62 0.08 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 7 111370848 111566618 2 2 190 0 0 1 1 0 0.57 0.87 3 0 0 NA NA NA 16 7 9 68.01 91.04 8.73 0 4 2 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 8 12685190 124102617 1 4 190 2 2 0 0 0 0.26 0.87 14 0 0 14 5 8 19 5 11 68.01 77.57 19.01 0 4 2 Whitelist ESAD-UK 0.62 1 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 9 20289007 130054284 1 2 190 1 1 0 0 0 0.57 0.46 7 0.02 0 7 3 4 9 3 4 68.01 63.93 32.96 0 2 4 Whitelist ESAD-UK 0.68 0.7 0.03 0 0.64 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 10 5491141 58622469 1 4 190 0 3 0 0 1 0.03 0.08 8 0 0 8 3 5 15 3 7 68.01 91.04 5.06 0 4 2 Whitelist ESAD-UK 0.54 0.23 0 0 0.33 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 11 292552 63918864 1 3 190 2 0 1 0 0 0.3 0.23 7 0 0 7 5 7 11 5 7 68.01 99.5 0.07 0 4 2 Whitelist ESAD-UK 0.62 0.46 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 12 67654310 118681101 1 3 190 3 0 0 0 0 0.03 0.39 5 0 0 5 3 5 7 3 5 68.01 99.92 0 0 3 0 Whitelist ESAD-UK 0.41 0.64 0 0 0.33 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 13 21150653 104767386 1 19 190 0 1 0 1 17 0.57 0 13 0 0 13 4 12 19 4 12 68.01 96.59 0.63 0 4 3 Whitelist ESAD-UK 20 0.81 0 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 21 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 14 NA NA 0 0 190 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.12 NA NA NA 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 15 NA NA 0 0 190 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist ESAD-UK NA 0.75 0 NA NA 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 16 78490870 89512785 1 4 190 4 0 0 0 0 0.01 0.11 8 0 0 8 4 8 10 5 10 68.01 98.65 0.34 0 4 2 Whitelist ESAD-UK 0.21 0.28 0 0 0.16 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 17 21970773 72174004 1 6 190 3 1 1 0 1 0.28 0.65 9 0 0 9 6 9 10 6 6 68.01 50.33 44.95 0 4 2 Whitelist ESAD-UK 0.68 0.86 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 18 48572375 48600186 1 1 190 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 68.01 35.28 64.69 0 2 NA Whitelist ESAD-UK 0.62 0.74 NA NA 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 19 40350399 49064376 1 2 190 1 1 0 0 0 0.57 1 4 0 0 4 0 3 6 3 4 68.01 37.12 55.6 0 2 4 Whitelist ESAD-UK 0.68 1 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 20 35281199 53598199 1 2 190 1 0 1 0 0 0.57 0 7 0 0 7 4 7 13 5 5 68.01 87.83 5.17 0 2 4 Whitelist ESAD-UK 0.68 0 0 0 0.64 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 21 36181266 36207278 1 1 190 1 0 0 0 0 0.39 0.51 2 0 NA NA NA NA 7 5 7 68.01 0.07 68.2 0 0 2 Whitelist ESAD-UK 0.62 0.75 0 NA 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 22 NA NA 0 0 190 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ESAD-UK NA NA NA NA NA 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 ESAD-UK::OCCAMS-ZZ-019 X 31779606 127702754 1 3 190 2 1 0 0 0 0.3 0.18 8 0 0 8 4 6 9 5 7 68.01 0.15 99.85 0 2 0 Whitelist ESAD-UK 0.62 0.4 0 0 0.59 1 No ESAD-UK OCCAMS-ZZ-019 ESAD 0.29 3.21 Eso-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 3 ESAD-UK DO50412 OCCAMS-ZZ-019 male alive C15.5 no treatment 67 401 401 Current reformed smoker, duration not specified NA Don't know/Not sure Not Documented Included Eso-AdenoCA ESAD UK 1 13.19 GACA-CN::CGP_donor_GC00001 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 4 206667 380444 1 1 2 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 4.96 0 99.99 0 2 NA Whitelist GACA-CN 0.62 0.32 NA NA 0.59 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 2 0.5 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 9 33613636 33796803 1 1 2 0 0 1 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 4.96 0 99.32 0 2 NA Whitelist GACA-CN 0.62 0.22 NA NA 0.59 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 2 0.5 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00001 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00001 GACA 1 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222275 CGP_donor_GC00001 male deceased C26.8 no treatment 69 203 203 Current smoker (includes daily smokers non-daily/occasional smokers) 2 Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.68 GACA-CN::CGP_donor_GC00002 1 168317030 168997444 4 4 442 1 3 0 0 0 0.11 0.79 6 0 0 6 4 6 40 9 9 72.7 53.08 43.63 0 7 4 Whitelist GACA-CN 0.54 0.94 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 8 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 2 13611641 233338366 1 22 442 1 10 0 0 11 0 0.04 23 0 0 23 9 13 25 9 13 72.7 64.64 35.27 0 3 4 Whitelist GACA-CN 5 0.11 0.14 0 0 0 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 33 0.04 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 3 3552923 52558557 2 15 442 0 3 1 0 11 0.11 0.26 22 0 0 22 4 8 50 7 9 72.7 50.14 49.83 0 8 3 Whitelist GACA-CN 17 0.73 0.51 0 0 0.48 0 Linked to low confidence GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA With other complex events 19 0.02 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 4 91742230 92007084 2 2 442 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 19 7 7 72.7 99.66 0.31 0 2 1 Whitelist GACA-CN 0.54 0.04 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 4 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 5 7410479 164692273 1 20 442 2 9 1 1 7 0 0.43 29 0 0 29 7 11 31 7 10 72.7 50.86 46.43 0 3 2 Whitelist GACA-CN 2_8 0.54 0.68 0 0 0.11 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 33 0.04 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 6 43561616 43906184 5 5 442 1 2 1 1 0 0.9 0.76 6 0 0 6 3 4 34 7 7 72.7 96.67 0.44 0 3 4 Whitelist GACA-CN 0.93 0.93 0 0 0.92 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 10 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 7 16733010 17028536 5 5 442 1 2 1 1 0 0.9 0.34 7 0 0 7 0 4 33 5 6 72.7 96.6 0.71 0 4 1 Whitelist GACA-CN 0.93 0.59 0 0 0.92 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 10 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 8 5585049 144557331 1 20 442 5 9 1 0 5 0 0.59 36 0 0 36 6 7 36 6 7 72.7 92.77 3.71 0 5 3 Whitelist GACA-CN 5 0.21 0.81 0 0 0.12 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 35 0.04 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 9 34621984 36300304 2 2 442 0 0 0 2 0 0.11 0.08 4 0 0 4 4 4 20 6 6 72.7 65.52 34.45 0 3 4 Whitelist GACA-CN 0.54 0.24 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 4 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 10 5499511 5686031 2 2 442 0 2 0 0 0 0.11 0.42 3 0 0 NA NA NA 16 5 5 72.7 96.19 0.49 0 5 7 Whitelist GACA-CN 0.54 0.67 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 4 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 11 11970538 12194912 2 2 442 0 2 0 0 0 0.11 0.37 4 0 0 4 0 3 18 7 7 72.7 90.19 6.01 0 4 5 Whitelist GACA-CN 0.54 0.62 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 4 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 12 3508847 105797574 1 7 442 1 5 0 0 1 0.01 0 9 0 0 9 5 9 10 5 5 72.7 87.81 12.11 0 3 4 Whitelist GACA-CN 0.13 0.01 0 0 0.19 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 13 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 13 73586014 105196786 3 8 442 2 4 0 0 2 0.06 0.3 11 0 0 11 8 11 31 8 8 72.7 85.85 0 0 5 6 Whitelist GACA-CN 0.62 0.54 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 14 0.02 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 False positive; manually removed GACA-CN::CGP_donor_GC00002 14 65424791 69312371 2 4 442 1 3 0 0 0 0.11 0.34 8 0 0 8 3 5 19 5 7 72.7 5.92 79.09 0 2 3 Whitelist GACA-CN 0.54 0.59 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 8 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 15 59676235 101323958 1 2 442 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 6 4 4 72.7 77.1 7.33 0 3 4 Whitelist GACA-CN 0.54 0.02 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 4 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 16 368109 89455544 1 11 442 2 4 0 0 5 0.06 0.88 12 0 0 12 3 6 13 3 6 72.7 81.49 13 0 3 2 Whitelist GACA-CN 2 0.49 1 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 17 0.02 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 17 38202359 40046302 42 57 442 13 11 6 12 15 0.43 0 54 0 0 54 5 6 76 5 6 72.7 65.91 34.09 0 7 8 Whitelist GACA-CN 0.62 0 0 0 0.64 0 Low confidence GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA With other complex events 99 0.11 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 18 3547767 47600376 1 3 442 1 2 0 0 0 0.3 0.02 6 0.01 0 6 4 6 7 5 5 72.7 99.72 0.25 0 3 4 Whitelist GACA-CN 0.62 0.07 0.01 0 0.59 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 19 7239458 34549451 38 42 442 11 7 11 9 4 0.76 0 42 0 0 42 6 6 49 6 8 72.7 52.02 40.67 0 8 7 Whitelist GACA-CN 0.96 0 0 0 0.84 0 Low confidence GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA With other complex events 80 0.09 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 20 16117248 21865896 10 10 442 3 3 2 2 0 0.94 0 10 0 0 10 10 10 28 10 14 72.7 92.3 0.86 0 4 5 Whitelist GACA-CN 0.96 0 0 0 0.96 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 20 0.02 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 False positive; manually removed GACA-CN::CGP_donor_GC00002 21 42742037 43219278 3 3 442 0 1 1 1 0 0.8 0.67 2 0 0 NA NA NA 9 5 7 72.7 54.5 15.98 0 3 4 Whitelist GACA-CN 0.87 0.87 0 0 0.84 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 22 50612027 50742992 1 1 442 0 1 0 0 0 0.39 0.5 1 0 NA NA NA NA 5 0 3 72.7 64.02 11.11 0 3 NA Whitelist GACA-CN 0.62 0.75 0 NA 0.59 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 2 0 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00002 X 7246213 128720014 1 11 442 6 3 1 1 0 0.11 0.02 12 0 0 12 3 5 14 3 5 72.7 99.81 0.19 0 3 1 Whitelist GACA-CN 0.54 0.09 0 0 0.48 0 No GACA-CN CGP_donor_GC00002 GACA 0.48 3.17 Stomach-AdenoCA NA 22 0.02 stopgain,17_7578536_A_T,CN:2 3 GACA-CN DO218068 CGP_donor_GC00002 male alive C26.8 no treatment 81 537 537 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 17.66 GACA-CN::CGP_donor_GC00003 1 27775911 57751929 1 3 102 3 0 0 0 0 0.03 0.36 1 0 0 NA NA NA NA NA NA 4.96 0 100 0 2 NA Whitelist GACA-CN 0.41 0.61 0 0 0.33 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 2 3297242 236919017 1 10 102 8 1 1 0 0 0 0.37 1 0 0 NA NA NA NA NA NA 4.96 0 99.91 0 2 NA Whitelist GACA-CN 0.07 0.62 0 0 0.05 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 20 0.1 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 3 60016460 60907952 2 2 102 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 4.96 0 99.95 0 2 NA Whitelist GACA-CN 0.54 0 0 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 4 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 5 58343688 176700439 1 4 102 3 1 0 0 0 0.11 0.84 1 0 0 NA NA NA NA NA NA 4.96 0.1 99.76 0 2 NA Whitelist GACA-CN 0.54 0.97 0 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 8 0.04 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 6 38261583 38625379 2 2 102 2 0 0 0 0 0.11 0.21 1 0 0 NA NA NA NA NA NA 4.96 0 99.85 0 2 NA Whitelist GACA-CN 0.54 0.44 0 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 7 18696125 110763659 1 4 102 4 0 0 0 0 0.01 0.27 2 0 0 NA NA NA NA NA NA 4.96 0 96.94 0 2 NA Whitelist GACA-CN 0.21 0.51 0 0 0.16 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 8 0.04 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 8 48417843 145696323 1 6 102 6 0 0 0 0 0 0.65 1 0 0 NA NA NA NA NA NA 4.96 0 99.54 0 2 NA Whitelist GACA-CN 0.04 0.86 0 0 0.03 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 12 0.06 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 9 14117062 139313044 1 3 102 3 0 0 0 0 0.03 0.8 1 0 0 NA NA NA NA NA NA 4.96 0 99.3 0 2 NA Whitelist GACA-CN 0.41 0.95 0 0 0.33 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 10 24652224 97159272 1 5 102 4 0 0 1 0 0.04 0.81 1 0 0 NA NA NA NA NA NA 4.96 0 99.82 0 2 NA Whitelist GACA-CN 0.45 0.96 0 0 0.36 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 10 0.05 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 11 10272156 103298138 1 6 102 5 1 0 0 0 0.01 0.24 1 0 0 NA NA NA NA NA NA 4.96 0 99.57 0 2 NA Whitelist GACA-CN 0.25 0.48 0 0 0.19 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 12 0.06 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 12 14602442 62744652 1 3 102 2 0 1 0 0 0.3 0.64 1 0 0 NA NA NA NA NA NA 4.96 0 99.92 0 2 NA Whitelist GACA-CN 0.62 0.85 0 0 0.59 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 13 101007239 101017715 1 1 102 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 4.96 0 100 0 2 NA Whitelist GACA-CN 0.62 1 0 NA 0.59 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 14 22580975 103348796 1 5 102 5 0 0 0 0 0 0.26 1 0 0 NA NA NA NA NA NA 4.96 0 99.09 0 2 NA Whitelist GACA-CN 0.1 0.5 0 0 0.07 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 10 0.05 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 15 64814750 64909607 1 1 102 1 0 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 4.96 0 99.87 0 2 NA Whitelist GACA-CN 0.62 0.77 NA NA 0.59 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 16 19373042 89913329 1 2 102 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 4.96 0 99.4 0 2 NA Whitelist GACA-CN 0.54 1 NA 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 17 NA NA 0 0 102 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.76 NA NA NA 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 18 NA NA 0 0 102 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.76 NA NA NA 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 19 4026003 39203648 1 2 102 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 4.96 0.27 99.56 0 2 NA Whitelist GACA-CN 0.54 1 NA 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 20 8896425 15576619 1 3 102 2 1 0 0 0 0.3 0.49 1 0 0 NA NA NA NA NA NA 4.96 0 99.01 0 2 NA Whitelist GACA-CN 0.62 0.73 0 0 0.59 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 21 27243363 27275539 1 1 102 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.96 0 77.63 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 22 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00003 X 7054303 22806005 1 2 102 2 0 0 0 0 0.11 0.25 1 NA 0 NA NA NA NA NA NA 4.96 100 0 0 1 NA Whitelist GACA-CN 0.54 0.49 NA 0 0.48 0 No GACA-CN CGP_donor_GC00003 GACA 0.73 1.93 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO222286 CGP_donor_GC00003 male alive C26.8 55 420 420 NA Included Stomach-AdenoCA GACA CN 1 13.82 GACA-CN::CGP_donor_GC00004 1 65878371 68735798 3 3 339 1 1 1 0 0 0.8 0.31 5 0 0 5 3 5 17 3 5 25.71 22.91 74.12 0 2 1 Whitelist GACA-CN 0.87 0.56 0 0 0.84 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 2 120750911 232886857 2 4 339 0 0 2 2 0 0.26 0.17 17 0 0 17 8 8 24 9 13 25.71 0.51 96.8 0 2 1 Whitelist GACA-CN 0.62 0.38 0 0 0.59 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 3 41357782 183461229 1 20 339 9 6 1 0 4 0 0.92 33 0 0 33 7 15 35 7 7 25.71 48.11 48.81 0 3 2 Whitelist GACA-CN 0.06 1 0 0 0.12 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 36 0.05 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 4 133670361 175084041 2 6 339 0 1 1 0 4 0.57 0.28 8 0 0 8 6 8 17 9 11 25.71 41.54 56.09 0 1 2 Whitelist GACA-CN 0.93 0.52 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 5 54921853 127363177 2 5 339 1 1 2 0 1 0.57 0 9 0 0 9 3 4 45 5 11 25.71 28.35 68.97 0 2 3 Whitelist GACA-CN 0.62 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 6 41243506 48452670 5 6 339 0 2 2 1 1 0.53 0.02 10 0 0 10 3 3 26 3 5 25.71 14.03 85.84 0 8 4 Whitelist GACA-CN 0.62 0.08 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 7 47000016 84251121 2 4 339 1 2 1 0 0 0.57 0.03 1 0 0 NA NA NA 24 4 7 25.71 18.33 81.44 0 2 NA Whitelist GACA-CN 0.68 0.11 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 8 119939947 128602078 2 4 339 1 3 0 0 0 0.11 0.32 6 0 0 6 3 4 16 4 7 25.71 34.09 65.9 0 2 5 Whitelist GACA-CN 0.54 0.58 0 0 0.48 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 9 88474329 130879135 1 3 339 0 3 0 0 0 0.03 0.02 2 0 0 NA NA NA 4 4 4 25.71 8.57 88.33 0 1 2 Whitelist GACA-CN 0.41 0.07 0 0 0.33 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 10 24497899 80831183 1 9 339 3 4 0 0 2 0.06 0.9 10 0 0 10 3 5 12 3 5 25.71 37.66 58.89 0 1 2 Whitelist GACA-CN 4 0.62 1 0 0 0.48 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 11 34510593 34880287 2 2 339 0 1 0 1 0 0.57 1 3 0 0 NA NA NA 18 4 7 25.71 1.69 97.89 0 2 3 Whitelist GACA-CN 0.68 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 12 71919868 132958560 6 9 339 2 1 1 2 3 0.88 0 29 0 0 29 5 9 32 5 9 25.71 11.77 87.71 1 3 4 Whitelist GACA-CN 0.68 0.02 0 0 0.91 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 13 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist GACA-CN NA 0.01 NA NA NA 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 14 25426429 102927293 1 10 339 6 4 0 0 0 0.01 0.88 14 0 0 14 4 11 15 4 11 25.71 1.41 97.68 0 2 4 Whitelist GACA-CN 0.3 1 0 0 0.23 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 15 31617574 81011041 1 6 339 0 2 1 0 3 0.3 0.87 6 0 0 6 4 6 7 5 5 25.71 49.39 45.83 0 2 1 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 16 11592857 86063551 1 11 339 3 1 0 2 5 0.34 0.03 14 0 0 14 5 8 16 7 10 25.71 12.3 83.18 0 2 1 Whitelist GACA-CN 0.68 0.1 0 0 0.59 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 17 4302852 80410986 1 27 339 3 9 0 1 14 0 0 26 0 0 26 4 12 26 4 12 25.71 28.86 65.72 0 2 3 Whitelist GACA-CN 12 0.1 0 0 0 0.07 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 40 0.06 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 18 37303456 37328800 2 2 339 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 7 4 4 25.71 22.52 72.84 0 2 NA Whitelist GACA-CN 0.68 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 19 28822077 45506534 1 10 339 4 2 1 0 3 0.17 0 15 0 0 15 4 9 18 4 4 25.71 65.56 34.26 0 1 3 Whitelist GACA-CN 4 0.68 0.01 0 0 0.59 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 20 14878345 50339871 1 4 339 1 3 0 0 0 0.11 0.57 8 0 0 8 3 5 9 3 5 25.71 37.09 55.91 0 2 3 Whitelist GACA-CN 0.54 0.8 0 0 0.48 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 21 30238205 36094116 1 4 339 0 2 0 0 2 0.11 0.32 4 0 0 4 4 4 5 5 5 25.71 77 0.35 0 1 2 Whitelist GACA-CN 0.68 0.57 0 0 0.48 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 22 32842241 49391041 1 5 339 1 1 1 0 2 0.8 0.61 5 0 0 5 3 5 8 6 6 25.71 33.84 66.16 0 1 0 Whitelist GACA-CN 0.93 0.82 0 0 0.84 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00004 X 6968751 7943729 2 2 339 2 0 0 0 0 0.11 0.53 1 0 0 NA NA NA 14 11 14 25.71 74.67 22.17 0 1 NA Whitelist GACA-CN 0.54 0.76 0 0 0.48 0 No GACA-CN CGP_donor_GC00004 GACA 0.24 2.01 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577106_A_G,CN:2 2 GACA-CN DO222292 CGP_donor_GC00004 male alive C26.8 65 NA NA NA Included Stomach-AdenoCA GACA CN 0 NA GACA-CN::CGP_donor_GC00005 1 72968318 72982861 1 1 40 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA 6 3 3 47.49 91.06 5.84 0 3 NA Whitelist GACA-CN 0.62 0.62 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 2 NA NA 0 0 40 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist GACA-CN NA 0.5 NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 3 174979131 175003944 1 1 40 1 0 0 0 0 0.39 0.76 2 0.06 NA NA NA NA 6 3 6 47.49 95.26 1.66 2 1 3 Whitelist GACA-CN 0.62 0.92 0.06 NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 4 184013971 185599285 1 1 40 1 0 0 0 0 0.39 0.75 1 0 NA NA NA NA NA NA NA 47.49 5.41 94.39 0 2 NA Whitelist GACA-CN 0.62 0.92 0 NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 5 85653284 122995961 1 2 40 1 1 0 0 0 0.57 0.32 10 0 0 10 3 7 14 4 7 47.49 85.04 11.76 0 2 3 Whitelist GACA-CN 0.68 0.57 0 0 0.64 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 6 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 7 33180016 132298147 1 2 40 1 1 0 0 0 0.57 0.17 3 0.01 0 NA NA NA NA NA NA 47.49 99.78 0 0 4 3 Whitelist GACA-CN 0.68 0.38 0.02 0 0.64 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 8 102546955 102576864 1 1 40 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 6 3 3 47.49 5.3 91.28 0 1 2 Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 9 9360132 9401490 1 1 40 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 5 4 4 47.49 73.67 25.66 0 1 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 11 57476260 116844666 1 2 40 2 0 0 0 0 0.11 0.43 3 0 0 NA NA NA 7 3 3 47.49 15.28 81.26 0 2 3 Whitelist GACA-CN 0.54 0.68 0 0 0.48 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 13 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 1 NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 16 72396169 72449200 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 47.49 95.4 0.06 0 2 4 Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 17 26932173 57352146 2 2 40 1 1 0 0 0 0.57 0 6 0 0 6 4 4 10 4 4 47.49 40.86 53.71 3 3 2 Whitelist GACA-CN 0.68 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 18 19739899 27692602 3 4 40 0 1 1 1 1 0.8 0 6 0 0 6 5 6 12 6 6 47.49 25.01 69.88 0 3 2 Whitelist GACA-CN 0.68 0 0 0 0.84 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 7 0.09 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 19 NA NA 0 0 40 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 9 4 5 0 0 0 0 0 0 Whitelist GACA-CN NA 0.78 NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 20 7707719 7718724 1 1 40 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 47.49 92.22 6.86 0 2 NA Whitelist GACA-CN 0.62 0.8 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00005 X 92756516 92769197 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 6 47.49 0.07 98.19 0 1 2 Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00005 GACA 0.31 2.52 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:2 3 GACA-CN DO222299 CGP_donor_GC00005 male deceased C26.8 69 1440 1440 NA Included Stomach-AdenoCA GACA CN 1 47.37 GACA-CN::CGP_donor_GC00008 1 160931136 229420367 12 12 307 8 1 1 2 0 0.01 0.24 4 0 0 4 4 4 5 5 5 11.49 3.83 96.16 0 2 3 Whitelist GACA-CN 0.25 0.48 0 0 0.19 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 24 0.04 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 2 75414371 112987486 1 6 307 3 0 0 0 3 0.03 0 5 0 0 5 5 5 5 5 5 11.49 1.66 95.65 0 2 3 Whitelist GACA-CN 0.54 0 0 0 0.33 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 9 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 3 60095326 174891851 1 8 307 8 0 0 0 0 0 0.02 1 0 0 NA NA NA NA NA NA 11.49 0 99.95 0 2 NA Whitelist GACA-CN 0.01 0.07 0 0 0 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 16 0.03 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 4 45708880 45762038 2 2 307 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 11.49 0 99.98 0 2 NA Whitelist GACA-CN 0.68 0.01 0 0 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 5 35107612 41952066 43 46 307 9 13 10 11 3 0.85 0 48 0 0 48 5 9 55 5 5 11.49 22.71 77.17 0 5 6 Whitelist GACA-CN 0.8 0 0 0 0.89 0 Low confidence GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA With other complex events 89 0.14 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 6 2039856 162815028 1 9 307 5 0 1 0 3 0.01 0.04 3 0 0 NA NA NA NA NA NA 11.49 0.32 99.51 0 2 4 Whitelist GACA-CN 0.62 0.14 0 0 0.19 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 15 0.02 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 7 87368899 101566609 1 5 307 3 1 0 1 0 0.28 0.06 5 0 0 5 3 5 5 3 5 11.49 0.01 99.77 0 2 3 Whitelist GACA-CN 0.62 0.18 0 0 0.59 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 10 0.02 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 8 9858899 36567123 7 10 307 2 1 2 2 3 0.93 0 17 0 0 17 3 7 24 3 5 11.49 13.42 86.09 0 4 6 Whitelist GACA-CN 2 0.96 0 0 0 0.95 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 17 0.03 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 9 32186760 37643642 2 2 307 2 0 0 0 0 0.11 0.66 1 0 0 NA NA NA NA NA NA 11.49 0 96.89 0 2 NA Whitelist GACA-CN 0.54 0.87 0 0 0.48 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 10 2847784 76828663 40 41 307 9 11 11 9 1 0.94 0 23 0 0 23 6 9 23 6 6 11.49 4.05 95.78 0 3 2 Whitelist GACA-CN 0.98 0 0 0 0.96 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 81 0.13 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 11 62438232 70283815 3 4 307 0 1 1 1 1 0.8 1 1 0 0 NA NA NA NA NA NA 11.49 0 99.57 0 2 NA Whitelist GACA-CN 0.68 1 0 0 0.84 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 7 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 12 1239915 28565786 1 8 307 2 0 2 3 1 0.44 1 9 0 0 9 3 4 11 4 5 11.49 13.97 85.95 0 2 4 Whitelist GACA-CN 0.62 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 15 0.02 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 13 111529862 111594381 1 1 307 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 11.49 0 100 0 2 NA Whitelist GACA-CN 0.62 0.05 NA NA 0.59 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 2 0 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 14 93595765 93620771 2 2 307 0 1 0 1 0 0.57 0.07 2 0 0 NA NA NA NA NA NA 11.49 0 99.08 0 1 2 Whitelist GACA-CN 0.68 0.21 0 0 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 15 NA NA 0 0 307 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.02 NA NA NA 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 16 5749613 79125475 1 5 307 5 0 0 0 0 0 0.59 1 0 0 NA NA NA NA NA NA 11.49 0 99.91 0 2 NA Whitelist GACA-CN 0.1 0.81 0 0 0.07 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 10 0.02 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 17 33345933 41396289 1 2 307 2 0 0 0 0 0.11 0.29 1 0 0 NA NA NA NA NA NA 11.49 27.33 67.59 0 2 NA Whitelist GACA-CN 0.54 0.54 0 0 0.48 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 18 8774294 10924187 2 2 307 0 1 0 1 0 0.57 0.05 1 0 0 NA NA NA 9 3 4 11.49 51.64 48.3 0 3 NA Whitelist GACA-CN 0.68 0.16 0 0 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 19 13824051 29025405 19 20 307 1 5 7 6 1 0.22 0 12 0 0 12 5 12 14 5 13 11.49 52.4 47.36 0 2 3 Whitelist GACA-CN 0.62 0 0 0 0.59 0 Low confidence GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA With other complex events 39 0.06 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 20 208280 15128565 1 2 307 1 1 0 0 0 0.57 0.23 3 0.09 0.04 NA NA NA NA NA NA 11.49 0.26 98.76 0 2 4 Whitelist GACA-CN 0.68 0.47 0.09 0.04 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 21 20753084 22901999 2 2 307 0 1 1 0 0 0.57 0.29 1 0 0 NA NA NA 5 3 3 11.49 25.72 51.63 0 2 NA Whitelist GACA-CN 0.68 0.53 0 0 0.64 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 22 NA NA 0 0 307 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00008 X NA NA 0 0 307 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0 NA NA NA 0 No GACA-CN CGP_donor_GC00008 GACA 0.93 2.06 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO224498 CGP_donor_GC00008 male alive C26.8 no treatment 70 1200 1200 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 39.47 GACA-CN::CGP_donor_GC00013 1 245555727 245727815 1 1 95 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 8.22 0 97.03 0 2 NA Whitelist GACA-CN 0.62 0.31 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 2 223705573 228623701 40 40 95 11 12 7 10 0 0.71 0 52 0 0 52 4 6 53 4 6 8.22 1.49 98.42 0 4 8 Whitelist GACA-CN 0.81 0 0 0 0.78 0 Low confidence GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA With other complex events 80 0.42 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 3 60364710 191067568 2 4 95 3 0 0 1 0 0.11 0.31 4 0 0 4 3 4 7 5 5 8.22 0.2 99.75 0 2 1 Whitelist GACA-CN 0.54 0.57 0 0 0.48 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 8 0.04 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 4 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 5 NA NA 0 0 95 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.32 NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 6 26372434 167164738 2 5 95 1 0 0 1 3 0.57 0.19 1 0 0 NA NA NA NA NA NA 8.22 0 99.85 0 2 NA Whitelist GACA-CN 0.93 0.41 0 0 0.64 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 7 0.04 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 7 NA NA 0 0 95 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.08 0 NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 8 94395540 94409830 1 1 95 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 8.22 35.5 64.5 0 2 3 Whitelist GACA-CN 0.62 0.26 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 9 129364962 129654544 1 1 95 0 1 0 0 0 0.39 0.79 1 NA NA NA NA NA NA NA NA 8.22 1.7 95.22 0 2 NA Whitelist GACA-CN 0.62 0.94 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 10 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 11 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 12 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 13 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 14 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 15 57407945 74602880 1 4 95 1 0 0 0 3 0.39 0.02 1 0 0 NA NA NA NA NA NA 8.22 0 99.85 0 2 NA Whitelist GACA-CN 0.54 0.07 0 0 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 5 0.03 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 16 78854847 78960301 1 1 95 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 8.22 0 99.99 0 2 NA Whitelist GACA-CN 0.62 0.76 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 17 2917453 37616876 1 4 95 1 0 2 1 0 0.57 0.33 3 0.01 0 NA NA NA 4 4 4 8.22 16.94 78.61 0 2 3 Whitelist GACA-CN 0.68 0.58 0.01 0 0.64 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 8 0.04 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 18 18651610 75872469 5 5 95 2 1 0 2 0 0.53 0 11 0 0 11 3 4 14 3 5 8.22 1.92 98.04 0 2 3 Whitelist GACA-CN 0.68 0.02 0 0 0.64 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 10 0.05 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 19 NA NA 0 0 95 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.9 NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 20 14853268 14961251 1 1 95 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 8.22 0.17 98.85 0 1 2 Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 21 NA NA 0 0 95 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.58 NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 22 NA NA 0 0 95 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.56 NA NA NA 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00013 X 19719982 19868621 1 1 95 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 8.22 100 0 0 1 NA Whitelist GACA-CN 0.62 0.26 NA NA 0.59 0 No GACA-CN CGP_donor_GC00013 GACA 0.92 1.97 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222276 CGP_donor_GC00013 male deceased C26.8 no treatment 36 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00014 1 59982604 247139652 1 3 58 3 0 0 0 0 0.03 0.63 1 0 0 NA NA NA NA NA NA 4.95 0 99.99 0 2 NA Whitelist GACA-CN 0.41 0.84 0 0 0.33 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 6 0.05 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 2 16557596 242304340 1 6 58 5 0 0 1 0 0.01 0.34 1 0 0 NA NA NA NA NA NA 4.95 0 99.89 0 2 NA Whitelist GACA-CN 0.25 0.59 0 0 0.19 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 12 0.1 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 3 96743130 174497046 1 2 58 2 0 0 0 0 0.11 0.44 1 NA 0 NA NA NA NA NA NA 4.95 0 99.97 0 2 NA Whitelist GACA-CN 0.54 0.69 NA 0 0.48 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 4 43109194 183537155 1 5 58 2 1 0 0 2 0.3 0.59 1 0 0 NA NA NA NA NA NA 4.95 0 99.99 0 2 NA Whitelist GACA-CN 0.62 0.81 0 0 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 8 0.07 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 5 22673448 138406697 1 3 58 1 1 0 0 1 0.57 0.41 1 0 0 NA NA NA NA NA NA 4.95 0 99.86 0 2 NA Whitelist GACA-CN 0.62 0.66 0 0 0.64 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 5 0.04 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 6 11504794 11898030 1 1 58 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 4.95 0 99.81 0 2 NA Whitelist GACA-CN 0.62 0.81 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 7 66537726 69838746 1 1 58 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.95 0 99.77 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 8 60600527 141866048 1 4 58 4 0 0 0 0 0.01 0.22 1 0 0 NA NA NA NA NA NA 4.95 0 99.99 0 2 NA Whitelist GACA-CN 0.21 0.45 0 0 0.16 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 8 0.07 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 9 105664468 112251578 1 1 58 0 0 0 1 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 4.95 0 99.82 0 2 NA Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 10 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 11 50324340 108126981 1 2 58 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 4.95 0 99.57 0 2 NA Whitelist GACA-CN 0.54 1 NA 0 0.48 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 12 90481791 128496245 1 2 58 1 0 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 4.95 0 99.98 0 2 NA Whitelist GACA-CN 0.68 1 NA 0 0.64 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 13 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 14 25448427 100048693 1 4 58 4 0 0 0 0 0.01 0.01 1 0 0 NA NA NA NA NA NA 4.95 0 99.08 0 2 NA Whitelist GACA-CN 0.21 0.05 0 0 0.16 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 8 0.07 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 15 91940950 92023178 1 1 58 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 4.95 0 99.87 0 2 NA Whitelist GACA-CN 0.62 0.88 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 16 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 17 49204313 56561433 1 3 58 3 0 0 0 0 0.03 0.21 1 0 0 NA NA NA NA NA NA 4.95 0 99.98 0 2 NA Whitelist GACA-CN 0.41 0.43 0 0 0.33 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 6 0.05 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 18 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 19 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 20 14631551 14675018 1 1 58 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.95 0 99.03 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 21 NA NA 0 0 58 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.75 NA NA NA 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 22 22253968 22320391 1 1 58 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 4.95 0 100 0 2 NA Whitelist GACA-CN 0.62 0.74 NA NA 0.59 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 2 0.02 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00014 X 31424090 32682910 3 3 58 1 0 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 4.95 100 0 0 1 NA Whitelist GACA-CN 0.87 0 0 0 0.84 0 No GACA-CN CGP_donor_GC00014 GACA 0.23 1.93 Stomach-AdenoCA NA 6 0.05 NA 2 GACA-CN DO218089 CGP_donor_GC00014 male deceased C26.8 no treatment 61 930 930 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 30.59 GACA-CN::CGP_donor_GC00015 1 1438291 202038804 1 3 170 1 2 0 0 0 0.3 0.15 5 0 0 5 3 5 6 3 3 40.17 3.84 92.87 0 2 4 Whitelist GACA-CN 0.62 0.36 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 2 21810413 232956642 1 11 170 2 4 2 1 2 0.55 0.78 5 0 0 5 5 5 5 5 5 40.17 0.14 99.76 0 2 4 Whitelist GACA-CN 6 0.87 0.94 0 0 0.64 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 20 0.06 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 3 60240375 60441302 2 2 170 2 0 0 0 0 0.11 0.36 1 0 0 NA NA NA 6 3 4 40.17 24.36 75.5 0 2 NA Whitelist GACA-CN 0.54 0.62 0 0 0.48 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 4 32773432 162111367 1 8 170 0 3 0 2 3 0.14 1 12 0 0 12 5 6 15 5 7 40.17 28.62 69.01 0 4 2 Whitelist GACA-CN 0.21 1 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 13 0.04 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 5 29380852 105614201 1 3 170 1 1 1 0 0 0.8 0.63 5 0 0 5 4 5 12 4 9 40.17 52.06 45.24 0 2 4 Whitelist GACA-CN 0.87 0.85 0 0 0.84 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 6 1870697 93998097 1 4 170 1 2 0 0 1 0.3 0.42 5 0 0 5 5 5 8 8 8 40.17 59.6 40.26 0 4 2 Whitelist GACA-CN 0.68 0.67 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 7 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 7 NA NA 0 0 170 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist GACA-CN NA 0.13 0 NA NA 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 8 NA NA 0 0 170 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 8 6 7 0 0 0 0 0 0 Whitelist GACA-CN NA 0.54 0 NA NA 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 9 31252643 117027829 1 2 170 0 2 0 0 0 0.11 0.43 6 0 0 6 4 5 7 4 5 40.17 85.71 11.18 0 4 2 Whitelist GACA-CN 0.54 0.67 0 0 0.48 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 10 1196201 77760857 8 10 170 2 1 2 3 2 0.8 0 16 0 0 16 7 7 21 8 8 40.17 94.33 2.31 2 3 4 Whitelist GACA-CN 0.68 0 0 0 0.84 1 High confidence GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA With other complex events 18 0.05 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 11 24143700 59327252 1 3 170 2 1 0 0 0 0.3 0.86 4 0 0 4 3 4 9 3 4 40.17 86.1 10.44 0 4 2 Whitelist GACA-CN 0.62 0.99 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 6 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 12 69056967 121113704 2 4 170 1 3 0 0 0 0.11 1 3 0 0 NA NA NA 5 3 5 40.17 0.33 99.59 0 2 3 Whitelist GACA-CN 0.54 1 0 0 0.48 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 13 24766003 105419271 1 5 170 3 2 0 0 0 0.14 0.39 14 0 0 14 4 7 17 5 8 40.17 76.53 20.69 0 2 4 Whitelist GACA-CN 0.62 0.64 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 10 0.03 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 14 21288082 53993968 1 8 170 1 4 1 1 1 0.28 0.07 11 0 0 11 7 10 12 7 10 40.17 23.45 75.64 0 2 5 Whitelist GACA-CN 0.62 0.21 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 15 0.04 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 15 59764762 68961441 1 2 170 1 1 0 0 0 0.57 0.81 1 0 0 NA NA NA NA NA NA 40.17 0 100 0 2 NA Whitelist GACA-CN 0.68 0.96 0 0 0.64 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 16 57263205 57358305 1 1 170 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 40.17 25.58 74.32 0 2 NA Whitelist GACA-CN 0.62 0.85 NA NA 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 17 39680778 80476768 1 5 170 1 3 0 0 1 0.11 0.47 3 0 0 NA NA NA NA NA NA 40.17 0.17 98.93 0 2 1 Whitelist GACA-CN 0.62 0.72 0 0 0.48 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 9 0.03 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 18 5789539 54609384 1 2 170 1 1 0 0 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 40.17 0 99.96 0 2 NA Whitelist GACA-CN 0.68 0.71 0 0 0.64 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 19 NA NA 0 0 170 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist GACA-CN NA 0.93 NA NA NA 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 20 738811 20007622 3 5 170 1 0 0 2 2 0.3 0 7 0 0 7 3 4 12 5 5 40.17 92.99 0.01 0 4 6 Whitelist GACA-CN 0.62 0 0 0 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 21 NA NA 0 0 170 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.36 NA NA NA 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 22 45267500 45319648 1 1 170 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 40.17 0 100 0 2 NA Whitelist GACA-CN 0.62 0.9 NA NA 0.59 1 No GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00015 X 16568492 152914444 1 7 170 2 3 0 0 2 0.14 0.86 1 0 0 NA NA NA NA NA NA 40.17 100 0 0 1 NA Whitelist GACA-CN 10 0.77 0.99 0 0 0.59 1 Linked to high confidence GACA-CN CGP_donor_GC00015 GACA 0.61 2.62 Stomach-AdenoCA With other complex events 12 0.04 stopgain,17_7578212_A_G,CN:2 2 GACA-CN DO218282 CGP_donor_GC00015 male alive C26.8 no treatment 59 1560 1560 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 51.32 GACA-CN::CGP_donor_GC00016 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 4 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.2 NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 9 NA NA 0 0 1 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.14 NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00016 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00016 GACA 0.48 2 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218517 CGP_donor_GC00016 female alive C26.8 no treatment 48 1800 1800 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 59.21 GACA-CN::CGP_donor_GC00017 1 62280721 175043142 1 4 115 1 1 0 0 2 0.57 0.08 4 0 0 4 3 4 5 3 3 30 0.09 99.91 0 2 1 Whitelist GACA-CN 0.62 0.24 0 0 0.64 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 6 0.03 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 2 205426764 205474457 1 1 115 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 3 3 30 0.02 99.88 0 1 2 Whitelist GACA-CN 0.62 0.07 NA NA 0.59 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 3 60267383 174952570 1 6 115 6 0 0 0 0 0 0.71 9 0 0 9 4 9 12 6 6 30 0.52 99.34 0 1 2 Whitelist GACA-CN 0.04 0.9 0 0 0.03 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 12 0.05 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 4 136012401 170213815 1 4 115 1 1 1 0 1 0.8 1 7 0 0 7 6 7 10 6 6 30 12.3 87.68 0 1 2 Whitelist GACA-CN 0.68 1 0 0 0.84 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 7 0.03 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 5 80790262 80872336 1 1 115 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 30 99.86 0 0 1 3 Whitelist GACA-CN 0.62 0.16 NA NA 0.59 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 6 2097886 163156351 1 7 115 3 2 0 0 2 0.14 0.85 5 0 0 5 3 5 5 3 3 30 0.28 99.57 0 2 1 Whitelist GACA-CN 0.62 0.98 0 0 0.59 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 12 0.05 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 7 110510620 125575489 1 2 115 1 1 0 0 0 0.57 0.1 3 NA 0 NA NA NA 4 3 4 30 36.53 60.75 0 2 3 Whitelist GACA-CN 0.68 0.26 NA 0 0.64 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 4 0.02 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 8 NA NA 0 0 115 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.54 0 NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 9 9557290 106390211 1 2 115 1 1 0 0 0 0.57 0.63 2 0 0 NA NA NA NA NA NA 30 0.21 99.09 0 1 2 Whitelist GACA-CN 0.68 0.84 0 0 0.64 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 4 0.02 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 10 NA NA 0 0 115 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.4 NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 11 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 12 7028514 133278608 30 39 115 6 7 9 8 9 0.88 0 50 0 0 50 50 50 50 50 50 30 36.41 59.17 0 1 2 Whitelist GACA-CN 0.98 0 0 0 0.91 1 High confidence GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA Canonical without polyploidization 69 0.3 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 13 NA NA 0 0 115 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.69 NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 14 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 15 NA NA 0 0 115 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.63 NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 16 78881769 79185507 2 2 115 2 0 0 0 0 0.11 0 4 0 0 4 3 4 19 7 7 30 59.6 40.23 0 2 1 Whitelist GACA-CN 0.54 0 0 0 0.48 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 4 0.02 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 17 NA NA 0 0 115 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.93 NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 18 75620428 75678360 1 1 115 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 30 0 99.96 0 2 NA Whitelist GACA-CN 0.62 0.63 NA NA 0.59 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 19 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 20 14600648 15151005 3 3 115 3 0 0 0 0 0.03 0.32 5 0 0 5 3 5 8 4 4 30 53.23 39.75 0 1 2 Whitelist GACA-CN 0.41 0.57 0 0 0.33 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 6 0.03 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 21 NA NA 0 0 115 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist GACA-CN NA 0.06 NA NA NA 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 22 22068632 50649237 15 20 115 2 5 4 4 5 0.74 0 14 0 0 14 9 14 15 9 9 30 63.89 34.84 10 2 3 Whitelist GACA-CN 0.68 0 0 0 0.82 1 High confidence GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA Canonical without polyploidization 35 0.15 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00017 X 122783014 122796191 1 1 115 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 30 99.77 0 0 1 NA Whitelist GACA-CN 0.62 0.12 NA NA 0.59 1 No GACA-CN CGP_donor_GC00017 GACA 0.32 2.17 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO218728 CGP_donor_GC00017 female deceased C26.8 no treatment 59 240 240 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 7.89 GACA-CN::CGP_donor_GC00018 1 100999231 245654541 1 3 85 1 0 1 0 1 0.57 0.69 7 0 0 7 3 5 8 3 5 33.27 17.2 79.82 0 2 0 Whitelist GACA-CN 0.62 0.89 0 0 0.64 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 5 0.03 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 2 168997415 188295657 1 1 85 1 0 0 0 0 0.39 0.01 4 NA NA 4 0 4 5 3 5 33.27 23.97 75.93 0 1 0 Whitelist GACA-CN 0.62 0.05 NA NA 0.59 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 3 59842169 60508088 1 2 85 2 0 0 0 0 0.11 0.13 2 NA 0 NA NA NA NA NA NA 33.27 0.22 99.58 0 1 2 Whitelist GACA-CN 0.54 0.32 NA 0 0.48 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 4 NA NA 0 0 85 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist GACA-CN NA 0.32 NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 5 NA NA 0 0 85 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 4 5 0 0 0 0 0 0 Whitelist GACA-CN NA 1 0 NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 6 NA NA 0 0 85 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.2 NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 7 NA NA 0 0 85 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist GACA-CN NA 0.58 NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 8 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 9 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 10 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 11 104455729 127800985 8 14 85 2 3 2 1 6 0.8 0 16 0 0 16 5 10 28 5 11 33.27 52.06 47.51 0 1 3 Whitelist GACA-CN 20 0.81 0 0 0 0.84 0 Low confidence GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA With other complex events 22 0.13 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 12 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 13 70125765 70486249 3 10 85 0 1 1 1 7 0.8 0 2 0 0 NA NA NA 6 4 6 33.27 53.91 43.31 0 1 3 Whitelist GACA-CN 0.68 0 0 0 0.84 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 13 0.08 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 14 74114019 74481723 1 1 85 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 4 33.27 0.34 96.86 0 2 3 Whitelist GACA-CN 0.62 0.76 NA NA 0.59 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 15 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 16 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 1 NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 17 35730842 38409858 2 6 85 0 3 2 1 0 0.34 0 5 0 0 5 0 3 11 3 3 33.27 41.43 58.56 7 2 3 Whitelist GACA-CN 0.62 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 12 0.07 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 18 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 19 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 20 35666161 59823118 3 14 85 1 1 2 2 8 0.88 0 10 0 0 10 5 5 15 6 6 33.27 71.69 22.03 0 4 2 Whitelist GACA-CN 11 0.81 0 0 0 0.91 0 Linked to low confidence GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA With other complex events 20 0.12 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 21 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 22 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00018 X 10878480 16346993 6 15 85 2 3 0 1 9 0.34 0 3 0 0 NA NA NA 6 4 5 33.27 99.99 0.01 0 1 3 Whitelist GACA-CN 0.93 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00018 GACA 0.25 1.85 Stomach-AdenoCA NA 21 0.12 NA 2 GACA-CN DO217867 CGP_donor_GC00018 male alive C26.8 no treatment 55 1140 1140 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 37.5 GACA-CN::CGP_donor_GC00019 1 156090511 246186822 1 3 101 2 1 0 0 0 0.3 0.19 6 0 0 6 6 6 9 9 9 77.56 99.94 0.05 0 2 3 Whitelist GACA-CN 0.62 0.41 0 0 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 2 78332311 203920225 1 2 101 1 1 0 0 0 0.57 0.28 4 0 0 4 3 4 5 3 5 77.56 97.29 0.02 0 4 2 Whitelist GACA-CN 0.68 0.52 0 0 0.64 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 3 4859509 173308463 1 11 101 6 1 1 1 2 0.04 0.01 19 0 0 19 3 9 22 3 5 77.56 67.22 29.55 0 3 2 Whitelist GACA-CN 0.54 0.03 0 0 0.4 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 20 0.1 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 4 91929097 92004850 1 1 101 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 77.56 99.99 0 0 1 3 Whitelist GACA-CN 0.62 0.21 NA NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 5 82443258 174254558 1 6 101 3 0 0 0 3 0.03 0.68 6 0 0 6 0 5 7 0 5 77.56 97.31 0.03 0 4 5 Whitelist GACA-CN 0.62 0.88 0 0 0.33 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 6 1698287 73008165 1 4 101 4 0 0 0 0 0.01 0.67 6 0 0 6 3 3 8 3 3 77.56 38.3 58.87 0 2 0 Whitelist GACA-CN 0.21 0.87 0 0 0.16 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 7 18183015 137045899 1 13 101 3 1 2 0 7 0.34 0 19 0 0 19 3 5 20 3 4 77.56 83.75 13.7 0 4 8 Whitelist GACA-CN 17 0.62 0 0 0 0.59 0 Linked to low confidence GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA With other complex events 19 0.09 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 8 5618575 129910583 2 8 101 2 2 0 0 4 0.26 0 14 0 0 14 3 6 18 3 6 77.56 74.88 21.69 0 3 2 Whitelist GACA-CN 0.68 0.01 0 0 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 9 NA NA 0 0 101 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist GACA-CN NA 0.95 NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 10 65134994 124149134 1 2 101 0 1 0 0 1 0.39 0.34 2 NA NA NA NA NA 4 3 3 77.56 96.64 0 0 4 5 Whitelist GACA-CN 0.54 0.59 NA NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 11 130107152 131952032 1 1 101 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 4 3 3 77.56 98.21 1.37 0 2 4 Whitelist GACA-CN 0.62 0.59 NA NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 12 24601333 33119350 1 2 101 1 1 0 0 0 0.57 0.34 3 NA 0 NA NA NA 4 3 3 77.56 96.09 0.03 0 2 3 Whitelist GACA-CN 0.68 0.59 NA 0 0.64 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 13 49339833 49456114 1 1 101 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 5 5 77.56 85.74 0.1 0 2 3 Whitelist GACA-CN 0.62 1 0 NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 14 45197627 45414636 1 1 101 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 4 77.56 81.29 2.79 0 1 3 Whitelist GACA-CN 0.62 0.63 NA NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 15 NA NA 0 0 101 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.76 NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 16 73102982 78832728 1 6 101 5 1 0 0 0 0.01 0.05 8 0 0 8 3 4 10 4 4 77.56 95.41 0.07 0 3 4 Whitelist GACA-CN 0.25 0.17 0 0 0.19 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 17 34964923 73655919 13 18 101 3 4 2 4 5 0.84 0 22 0 0 22 4 7 25 5 8 77.56 85.56 9.99 0 3 8 Whitelist GACA-CN 0.87 0 0 0 0.88 0 Low confidence GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA With other complex events 31 0.15 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 18 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 19 NA NA 0 0 101 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.9 NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 20 15014367 15453282 1 1 101 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 0 3 77.56 69.89 23.78 0 1 3 Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 21 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 22 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00019 X 11490705 153008129 1 4 101 3 1 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 77.56 100 0 0 1 NA Whitelist GACA-CN 0.54 1 0 0 0.48 0 No GACA-CN CGP_donor_GC00019 GACA 0.13 3.34 Stomach-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:3 4 GACA-CN DO218088 CGP_donor_GC00019 male alive C26.8 no treatment 58 690 690 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 22.7 GACA-CN::CGP_donor_GC00020 1 22345572 221724579 1 18 403 1 5 1 0 11 0.04 0.03 18 0 0 18 6 8 18 6 8 66.7 87.01 12.67 0 3 4 Whitelist GACA-CN 0.64 0.12 0 0 0.38 0 Linked to low confidence GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA With other complex events 25 0.03 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 2 50040337 50171661 2 4 403 0 0 1 1 2 0.57 0.28 3 0 0 NA NA NA 26 4 8 66.7 95.73 1.32 0 5 6 Whitelist GACA-CN 0.62 0.52 0 0 0.64 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 6 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 3 61065170 61204269 3 3 403 1 0 1 1 0 0.8 0.85 1 0 0 NA NA NA 30 5 5 66.7 44.09 52.76 0 2 NA Whitelist GACA-CN 0.87 0.98 0 0 0.84 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 6 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 4 7841887 118524435 1 5 403 2 1 0 0 2 0.3 0 10 0 0 10 8 10 11 9 9 66.7 2.23 97.75 0 2 1 Whitelist GACA-CN 0.62 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 8 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 5 165872254 179662916 2 4 403 1 1 0 0 2 0.57 0.03 4 0 0 4 3 4 14 4 8 66.7 80.78 16.36 0 3 2 Whitelist GACA-CN 0.62 0.11 0 0 0.64 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 6 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 6 1761939 2056294 2 2 403 2 0 0 0 0 0.11 0.06 1 0 0 NA NA NA 23 7 7 66.7 92.58 4.58 0 4 NA Whitelist GACA-CN 0.54 0.18 0 0 0.48 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 4 0 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 7 17611709 94835817 1 14 403 3 2 2 1 6 0.8 0.58 22 0 0 22 3 5 27 5 5 66.7 96.55 0.25 0 5 3 Whitelist GACA-CN 0.98 0.8 0 0 0.84 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 22 0.03 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 8 99969120 137759332 6 23 403 1 2 2 1 17 0.88 0 41 0 0 41 4 7 65 6 6 66.7 65.52 30.92 1 5 2 Whitelist GACA-CN 1 0.79 0 0 0 0.91 0 Low confidence GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA With other complex events 29 0.04 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 9 32696083 36838210 3 3 403 0 0 1 2 0 0.3 0.61 4 0 0 4 0 3 17 4 6 66.7 45.53 53.76 0 1 3 Whitelist GACA-CN 0.62 0.82 0 0 0.59 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 6 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 10 56498962 102820511 23 66 403 8 5 4 6 43 0.68 0 24 0 0 24 3 5 33 4 5 66.7 94.53 2.01 2 4 1 Whitelist GACA-CN 0.94 0 0 0 0.75 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 89 0.11 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 11 69004148 111983118 11 24 403 0 4 3 4 13 0.27 0 40 0 0 40 4 5 55 8 8 66.7 99.44 0 0 9 16 Whitelist GACA-CN 0.62 0 0 0 0.59 0 Low confidence GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA With other complex events 35 0.04 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 12 24022300 118388381 1 8 403 1 4 0 0 3 0.04 0.08 10 0 0 10 4 6 16 4 6 66.7 60 36.26 0 3 2 Whitelist GACA-CN 0.62 0.22 0 0 0.36 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 13 0.02 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 13 50339625 114599941 2 30 403 1 1 1 1 26 1 0 14 0 0 14 4 5 16 4 5 66.7 85.38 0 2 5 6 Whitelist GACA-CN 1 0 0 0 1 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 34 0.04 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 14 39850727 105450662 1 30 403 4 3 1 1 21 0.39 0 26 0 0 26 4 6 33 4 8 66.7 65.03 16.26 0 3 2 Whitelist GACA-CN 0.66 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 39 0.05 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 15 31186523 64930453 1 7 403 2 0 0 0 5 0.11 0.76 5 0 0 5 3 5 12 3 4 66.7 72.26 12.24 0 1 0 Whitelist GACA-CN 0.62 0.93 0 0 0.48 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 9 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 16 82192894 86935543 3 3 403 0 1 1 1 0 0.8 0.44 5 0 0 5 3 3 23 6 8 66.7 16.47 78.95 0 1 2 Whitelist GACA-CN 0.87 0.69 0 0 0.84 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 6 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 17 28608032 31644304 1 1 403 1 0 0 0 0 0.39 0.09 2 0 NA NA NA NA 7 0 6 66.7 72.53 23.02 0 3 4 Whitelist GACA-CN 0.62 0.25 0 NA 0.59 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 2 0 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 18 37086082 70798459 1 7 403 1 2 1 1 2 0.9 0.76 10 0 0 10 4 4 14 4 5 66.7 55.38 39.98 0 3 2 Whitelist GACA-CN 0.96 0.92 0 0 0.92 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 12 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 19 43242787 43284424 1 1 403 0 1 0 0 0 0.39 0.37 1 0 NA NA NA NA 8 4 7 66.7 75.95 15.97 0 4 NA Whitelist GACA-CN 0.62 0.62 0 NA 0.59 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 2 0 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 20 36029357 46302683 4 10 403 0 4 0 0 6 0.01 0 9 0 0 9 3 5 17 3 4 66.7 70.35 22.5 0 8 2 Whitelist GACA-CN 0.54 0 0 0 0.16 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 14 0.02 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 21 26796615 40305459 2 3 403 1 0 1 0 1 0.57 0.17 5 0 0 5 3 5 9 3 4 66.7 12.17 65.66 0 2 1 Whitelist GACA-CN 0.87 0.38 0 0 0.64 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 5 0.01 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 22 23785833 35144816 1 2 403 0 2 0 0 0 0.11 0.64 4 NA 0 4 3 4 5 3 3 66.7 99.6 0.4 0 1 2 Whitelist GACA-CN 0.54 0.85 NA 0 0.48 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 4 0 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00020 X 7182295 128207178 1 14 403 5 3 0 0 6 0.03 0.73 12 0 0 12 12 12 13 13 13 66.7 54.5 45.5 0 1 2 Whitelist GACA-CN 0.49 0.91 0 0 0.33 0 No GACA-CN CGP_donor_GC00020 GACA 0.44 3.17 Stomach-AdenoCA NA 22 0.03 NA 4 GACA-CN DO217814 CGP_donor_GC00020 male deceased C26.8 no treatment 66 270 270 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 8.88 GACA-CN::CGP_donor_GC00021 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 2 NA NA 0 0 9 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.77 NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 5 30134928 41793470 1 5 9 1 1 1 1 1 1 0 4 0 0 4 4 4 5 5 5 5.27 4.35 95.51 0 2 3 Whitelist GACA-CN 0.93 0 0 0 1 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 9 0.5 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 6 NA NA 0 0 9 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.68 NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 15 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.01 NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 19 NA NA 0 0 9 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.37 NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00021 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00021 GACA 0.61 1.93 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218019 CGP_donor_GC00021 male alive C26.8 no treatment 54 1500 1500 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 49.34 GACA-CN::CGP_donor_GC00022 1 79451605 79791976 5 5 149 0 0 3 2 0 0.14 0 4 0 0 4 3 4 16 6 9 41.86 17.65 79.38 0 2 0 Whitelist GACA-CN 0.62 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 10 0.03 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 2 8672161 139745881 7 7 149 2 2 1 2 0 0.93 0.3 8 0 0 8 4 7 11 5 7 41.86 40.94 58.95 0 1 2 Whitelist GACA-CN 0.96 0.55 0 0 0.95 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 14 0.05 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 3 54175803 116384822 1 6 149 4 1 0 0 1 0.04 1 7 0 0 7 3 7 12 6 12 41.86 21.46 75.44 0 1 2 Whitelist GACA-CN 0.54 1 0 0 0.36 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 11 0.04 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 4 13616468 190423096 1 4 149 1 2 0 0 1 0.3 0.05 6 0.61 0 6 6 6 6 6 6 41.86 82.21 17.62 0 1 2 Whitelist GACA-CN 0.62 0.16 0.61 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 7 0.02 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 5 84759207 166064706 2 4 149 0 0 1 1 2 0.57 0.87 1 0 0 NA NA NA 6 3 3 41.86 71.24 28.62 0 1 NA Whitelist GACA-CN 0.62 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 6 0.02 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 6 1935884 148023960 1 6 149 3 2 0 1 0 0.34 0.39 1 0 0 NA NA NA NA NA NA 41.86 0 99.85 0 2 NA Whitelist GACA-CN 0.62 0.64 0 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 12 0.04 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 7 110577107 110657760 4 4 149 4 0 0 0 0 0.01 0.02 1 0 0 NA NA NA NA NA NA 41.86 0 99.78 0 2 NA Whitelist GACA-CN 0.21 0.07 0 0 0.16 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 8 0.03 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 8 48325247 141129597 1 7 149 4 2 0 1 0 0.17 0.19 8 0 0 8 6 8 9 7 7 41.86 94.86 1.56 0 1 0 Whitelist GACA-CN 0.62 0.41 0 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 14 0.05 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 9 1262627 22053740 2 2 149 0 0 1 1 0 0.57 1 4 0.01 0.04 4 4 4 5 5 5 41.86 99.86 0 0 0 1 Whitelist GACA-CN 0.68 1 0.01 0.04 0.64 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 4 0.01 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 10 37397188 81804859 1 5 149 1 3 0 0 1 0.11 0.69 3 0 0 NA NA NA NA NA NA 41.86 0.03 99.79 0 2 1 Whitelist GACA-CN 0.45 0.89 0 0 0.48 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 9 0.03 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 11 113452562 113573561 1 1 149 0 1 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 41.86 0 99.57 0 2 NA Whitelist GACA-CN 0.62 0.38 NA NA 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 12 50936530 111942236 1 5 149 0 0 1 0 4 0.39 0.08 1 0 0 NA NA NA 5 5 5 41.86 76.7 23.22 0 1 NA Whitelist GACA-CN 0.93 0.22 0 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 6 0.02 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 13 41990234 92922870 1 5 149 0 4 0 0 1 0.01 0.36 5 0 0 5 3 5 5 3 3 41.86 26.02 59.83 0 2 1 Whitelist GACA-CN 0.1 0.62 0 0 0.16 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 9 0.03 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 14 67791424 67803901 1 1 149 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 41.86 80.11 3.98 0 1 NA Whitelist GACA-CN 0.62 0.59 NA NA 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 15 NA NA 0 0 149 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.33 NA NA NA 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 16 19386190 78834024 1 8 149 4 2 0 0 2 0.06 0.01 10 0 0 10 3 10 11 3 3 41.86 0.74 99.17 0 2 1 Whitelist GACA-CN 0.41 0.03 0 0 0.48 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 14 0.05 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 17 NA NA 0 0 149 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.42 NA NA NA 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 18 26067353 30445790 3 3 149 1 1 0 1 0 0.8 0.07 3 0 0 NA NA NA 8 8 8 41.86 80.79 19.18 0 1 2 Whitelist GACA-CN 0.87 0.2 0 0 0.84 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 6 0.02 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 19 NA NA 0 0 149 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.63 NA NA NA 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 20 14559867 15402607 5 5 149 5 0 0 0 0 0 0 3 0 0 NA NA NA 6 3 5 41.86 95.92 3.1 0 1 2 Whitelist GACA-CN 0.1 0.01 0 0 0.07 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 10 0.03 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 21 22825855 22872642 1 1 149 0 1 0 0 0 0.39 0.71 2 NA NA NA NA NA 6 4 6 41.86 49.1 28.66 0 0 2 Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 2 0.01 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 22 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 0 0 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00022 X 62217837 145299048 1 3 149 1 2 0 0 0 0.3 0.26 1 0 0 NA NA NA NA NA NA 41.86 100 0 0 1 NA Whitelist GACA-CN 0.62 0.5 0 0 0.59 0 No GACA-CN CGP_donor_GC00022 GACA 0.45 1.66 Stomach-AdenoCA NA 6 0.02 NA 1 GACA-CN DO222285 CGP_donor_GC00022 male deceased C26.8 no treatment 71 630 630 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 20.72 GACA-CN::CGP_donor_GC00027 1 110806459 111186937 2 2 88 0 2 0 0 0 0.11 0.42 1 0 0 NA NA NA 5 3 3 9.52 0.23 99.77 0 2 NA Whitelist GACA-CN 0.54 0.67 0 0 0.48 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 2 50264640 211323731 1 3 88 1 2 0 0 0 0.3 0.85 3 0 0 NA NA NA NA NA NA 9.52 0.02 99.88 0 2 3 Whitelist GACA-CN 0.62 0.98 0 0 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 3 49488231 197338848 1 5 88 2 3 0 0 0 0.14 0.83 3 0 0 NA NA NA NA NA NA 9.52 0.01 99.63 0 2 3 Whitelist GACA-CN 0.62 0.97 0 0 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 10 0.06 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 4 93069755 170081880 1 6 88 1 5 0 0 0 0.01 0.2 4 0 0 4 4 4 5 5 5 9.52 0.15 99.65 0 2 3 Whitelist GACA-CN 0.25 0.42 0 0 0.19 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 12 0.07 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 5 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 6 NA NA 0 0 88 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.96 NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 7 100180472 155732724 1 3 88 0 2 0 1 0 0.3 1 3 0 0 NA NA NA NA NA NA 9.52 0.12 99.65 0 2 4 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 8 NA NA 0 0 88 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GACA-CN NA 0.58 NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 9 139793974 140159441 2 2 88 0 0 1 1 0 0.57 0.4 1 0 0 NA NA NA NA NA NA 9.52 0 99.84 0 2 NA Whitelist GACA-CN 0.68 0.64 0 0 0.64 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 10 63456627 127391171 1 6 88 0 2 0 1 3 0.3 0.07 4 0 0 4 4 4 5 5 5 9.52 2.7 97.12 0 2 3 Whitelist GACA-CN 0.93 0.2 0 0 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 9 0.05 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 11 32637582 67143915 1 3 88 0 3 0 0 0 0.03 0.13 3 0 0 NA NA NA NA NA NA 9.52 1.78 97.79 0 2 3 Whitelist GACA-CN 0.41 0.32 0 0 0.33 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 6 0.03 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 12 50259663 52082888 1 2 88 0 2 0 0 0 0.11 0.61 1 0 0 NA NA NA NA NA NA 9.52 0.07 99.84 0 2 NA Whitelist GACA-CN 0.54 0.82 0 0 0.48 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 13 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 14 90764750 105276761 1 2 88 0 2 0 0 0 0.11 0.36 2 0 0 NA NA NA 4 4 4 9.52 5.19 91.12 0 1 2 Whitelist GACA-CN 0.54 0.61 0 0 0.48 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 15 NA NA 0 0 88 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.76 NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 16 88382476 88728872 2 2 88 0 0 1 1 0 0.57 0.51 1 0 0 NA NA NA NA NA NA 9.52 0 99.91 0 2 NA Whitelist GACA-CN 0.68 0.75 0.01 0 0.64 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 4 0.02 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 17 4237335 80475592 1 6 88 0 2 0 0 4 0.11 0.01 1 0.01 0 NA NA NA NA NA NA 9.52 5.2 93.9 0 2 NA Whitelist GACA-CN 10 0.93 0.05 0.01 0 0.48 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 8 0.05 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 18 NA NA 0 0 88 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist GACA-CN NA 0.04 0 NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 19 2084698 46736938 1 8 88 1 3 0 0 4 0.11 0 10 0 0 10 5 10 12 5 7 9.52 40.7 52.03 1 1 2 Whitelist GACA-CN 0.54 0 0 0 0.48 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 12 0.07 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 20 NA NA 0 0 88 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.9 NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 21 44063781 44233025 1 1 88 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.52 0 77.35 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 22 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00027 X 92823260 92861938 1 1 88 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 9.52 100 0 0 1 NA Whitelist GACA-CN 0.62 0.33 NA NA 0.59 0 No GACA-CN CGP_donor_GC00027 GACA 0.96 1.96 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO218230 CGP_donor_GC00027 male deceased C26.8 no treatment 79 210 210 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 6.91 GACA-CN::CGP_donor_GC00028 1 168512574 168546281 1 1 62 0 0 1 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 7.97 0.99 98.69 0 2 NA Whitelist GACA-CN 0.62 1 0 NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 2 62118604 62398813 1 1 62 0 0 0 1 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 7.97 0 99.9 0 2 NA Whitelist GACA-CN 0.62 0.39 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 3 84259766 131277051 1 1 62 0 0 1 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 7.97 0 99.86 0 2 NA Whitelist GACA-CN 0.62 0.58 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 4 NA NA 0 0 62 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.32 NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 5 3028809 59704757 1 3 62 2 0 0 0 1 0.11 1 1 NA 0.01 NA NA NA NA NA NA 7.97 0 99.86 0 2 NA Whitelist GACA-CN 0.62 1 NA 0.01 0.48 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 5 0.04 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 6 32642466 62489414 5 7 62 1 2 2 0 2 0.53 0 13 0 0 13 3 9 15 3 9 7.97 6.96 92.89 4 4 2 Whitelist GACA-CN 0.62 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 12 0.1 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 7 108398279 110859545 1 1 62 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 7.97 0 97.45 0 2 NA Whitelist GACA-CN 0.62 0.93 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 8 121756465 122191075 1 1 62 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA 7 5 5 7.97 6.22 93.77 0 2 3 Whitelist GACA-CN 0.62 0.49 0 NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 9 21595392 35575122 2 2 62 1 1 0 0 0 0.57 0 8 0 0 8 3 6 12 3 3 7.97 2.29 97.03 0 2 3 Whitelist GACA-CN 0.68 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 4 0.03 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 10 45292202 80649509 1 3 62 1 0 1 1 0 0.8 0.02 1 0 0 NA NA NA NA NA NA 7.97 0.4 99.42 0 2 NA Whitelist GACA-CN 0.87 0.09 0 0 0.84 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 6 0.05 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 11 64695558 84193740 3 4 62 1 0 0 2 1 0.3 0.01 6 0 0 6 4 5 6 4 5 7.97 3.32 96.24 0 2 3 Whitelist GACA-CN 0.54 0.04 0 0 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 7 0.06 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 12 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 13 90746891 90981937 1 1 62 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 7.97 0 99.13 0 2 NA Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 14 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 15 NA NA 0 0 62 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.89 NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 16 78150199 78307634 1 1 62 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.97 0 99.91 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 17 29237236 60237317 1 2 62 0 0 1 1 0 0.57 0.09 1 0 0 NA NA NA NA NA NA 7.97 1.31 98.68 0 2 NA Whitelist GACA-CN 0.68 0.24 0 0 0.64 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 4 0.03 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 18 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 1 NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 19 7460683 10568180 1 1 62 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 7.97 0 99.83 0 2 NA Whitelist GACA-CN 0.62 0.6 NA NA 0.59 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 2 0.02 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 20 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 1 NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00028 X NA NA 0 0 62 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.93 NA NA NA 0 No GACA-CN CGP_donor_GC00028 GACA 0.65 1.96 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7578397_G_-,CN:2 2 GACA-CN DO218442 CGP_donor_GC00028 male alive C26.8 no treatment 74 960 960 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 31.58 GACA-CN::CGP_donor_GC00029 1 161701746 246402029 2 4 246 2 0 1 1 0 0.57 0.1 12 0 0 12 6 8 18 6 8 59.6 52.8 47.2 0 5 4 Whitelist GACA-CN 0.68 0.26 0 0 0.64 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 2 180482271 180498036 2 2 246 0 0 1 1 0 0.57 0.82 2 0 0 NA NA NA 21 8 8 59.6 99.78 0.12 0 3 4 Whitelist GACA-CN 0.68 0.96 0 0 0.64 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 3 60384462 175147854 1 4 246 2 0 0 0 2 0.11 0.13 4 0 0 4 4 4 11 7 7 59.6 1.01 98.86 0 1 2 Whitelist GACA-CN 0.54 0.33 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 4 125902490 167111168 11 13 246 4 3 3 1 2 0.63 0.16 14 0 0 14 7 9 17 7 10 59.6 25.16 74.83 1 4 5 Whitelist GACA-CN 6 0.9 0.37 0 0 0.71 1 High confidence GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA With other complex events 24 0.05 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 5 54358154 138271539 19 21 246 3 6 6 4 2 0.7 0 29 0 0 29 7 7 34 7 7 59.6 15.8 84.08 0 2 3 Whitelist GACA-CN 8 0.76 0 0 0 0.78 1 High confidence GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA With other complex events 40 0.08 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 6 8337578 165204118 5 8 246 2 1 1 1 3 0.9 0.18 21 0 0 21 6 8 22 6 8 59.6 99.83 0.03 1 4 5 Whitelist GACA-CN 4 1 0.39 0 0 0.92 1 Linked to high confidence GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA With other complex events 13 0.03 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 7 7433562 130778399 1 18 246 9 3 1 1 4 0.01 0.01 21 0 0 21 3 15 24 5 5 59.6 97.35 0.1 0 5 4 Whitelist GACA-CN 3 0.41 0.05 0 0 0.16 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 32 0.07 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 8 112366160 131135555 1 5 246 3 2 0 0 0 0.14 0.11 6 0 0 6 6 6 18 7 9 59.6 67.25 29.33 0 5 6 Whitelist GACA-CN 0.62 0.29 0 0 0.59 1 Linked to high confidence GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA After polyploidization 10 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 9 9030984 12259805 1 1 246 0 0 1 0 0 0.39 0.14 2 0.02 NA NA NA NA 4 3 4 59.6 2.29 94.58 0 1 2 Whitelist GACA-CN 0.62 0.34 0.02 NA 0.59 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 10 8320555 126558052 1 8 246 3 4 0 0 1 0.06 1 12 0 0 12 6 12 14 6 6 59.6 77.38 22.45 0 3 4 Whitelist GACA-CN 0.54 1 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 15 0.03 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 11 2139728 129994174 1 7 246 1 3 0 0 3 0.11 1 7 0 0 7 4 5 9 4 4 59.6 99.57 0 0 4 5 Whitelist GACA-CN 0.77 1 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 11 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 12 11033658 120820328 1 7 246 5 1 0 0 1 0.01 1 8 0 0 8 6 8 8 6 8 59.6 42.74 57.18 2 2 3 Whitelist GACA-CN 0.13 1 0 0 0.19 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 13 0.03 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 13 21733320 103874093 1 5 246 3 0 1 0 1 0.11 0.6 7 0 0 7 6 7 10 7 9 59.6 97.22 0 0 6 7 Whitelist GACA-CN 0.45 0.81 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 9 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 14 38151759 68775465 1 4 246 0 4 0 0 0 0.01 0.85 7 0 0 7 5 7 9 5 7 59.6 95.51 1.7 0 3 4 Whitelist GACA-CN 0.21 0.99 0 0 0.16 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 15 33129765 85631035 1 5 246 0 2 0 0 3 0.11 1 6 0 0 6 3 4 8 4 4 59.6 79.7 15.42 0 3 4 Whitelist GACA-CN 0.45 1 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 7 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 16 153345 75069420 1 5 246 0 4 0 0 1 0.01 0.69 8 0 0 8 5 7 9 6 6 59.6 83.05 16.92 0 4 3 Whitelist GACA-CN 0.1 0.89 0.01 0 0.16 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 9 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 17 NA NA 0 0 246 0 0 0 0 0 NA 0.84 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.98 0 NA NA 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 18 2780430 66175122 1 3 246 1 2 0 0 0 0.3 0.23 5 0.36 0.17 5 4 5 6 5 5 59.6 48.11 51.85 0 3 4 Whitelist GACA-CN 0.62 0.46 0.36 0.17 0.59 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 19 28067200 38487957 1 2 246 0 2 0 0 0 0.11 0.16 1 0 0 NA NA NA NA NA NA 59.6 99.65 0 2 4 NA Whitelist GACA-CN 0.54 0.37 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 20 17386845 39800250 1 4 246 1 1 0 1 1 0.8 0 5 0 0 5 4 5 19 5 6 59.6 92.73 0 0 7 8 Whitelist GACA-CN 0.68 0.02 0 0 0.84 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 7 0.01 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 21 NA NA 0 0 246 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.93 NA NA NA 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 22 41413832 41631321 1 1 246 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 59.6 100 0 0 3 7 Whitelist GACA-CN 0.62 0.93 NA NA 0.59 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 2 0 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00029 X 121794352 140334655 1 4 246 1 3 0 0 0 0.11 0.14 5 0 0 5 5 5 5 5 5 59.6 0.03 99.97 0 2 3 Whitelist GACA-CN 0.54 0.34 0 0 0.48 1 No GACA-CN CGP_donor_GC00029 GACA 0.53 3.33 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578212_A_G,CN:3 2 GACA-CN DO218673 CGP_donor_GC00029 male alive C26.8 no treatment 73 1650 1650 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 54.28 GACA-CN::CGP_donor_GC00033 1 159514710 163086861 3 3 925 0 3 0 0 0 0.03 0.03 5 0 0 5 5 5 81 16 18 43.28 10.53 89.47 0 2 3 Whitelist GACA-CN 0.41 0.1 0 0 0.33 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 2 120552045 179365153 4 9 925 1 2 3 2 1 0.8 0.41 12 0 0 12 11 12 65 20 25 43.28 49.2 50.7 0 2 3 Whitelist GACA-CN 0.97 0.65 0 0 0.84 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 False positive; manually removed GACA-CN::CGP_donor_GC00033 3 98369145 186328430 10 13 925 1 6 1 2 3 0.08 0 28 0 0 28 5 14 90 8 13 43.28 65.73 34.13 0 3 2 Whitelist GACA-CN 0.54 0 0 0 0.48 0 Low confidence GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA With other complex events 23 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 4 90264273 134826326 2 4 925 1 2 1 0 0 0.57 0.03 11 0 0 11 7 11 50 17 23 43.28 11.09 85.99 0 2 3 Whitelist GACA-CN 0.68 0.1 0 0 0.64 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 5 44078440 135969173 2 4 925 1 3 0 0 0 0.11 0.06 18 0 0 18 7 15 34 9 17 43.28 24.22 75.66 0 2 3 Whitelist GACA-CN 0.54 0.18 0 0 0.48 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 6 33194692 34966359 2 2 925 0 2 0 0 0 0.11 0 2 0 0 NA NA NA 37 13 27 43.28 8.18 89 0 2 3 Whitelist GACA-CN 0.54 0.02 0 0 0.48 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 7 71363987 105349236 4 4 925 2 1 1 0 0 0.57 0.72 19 0 0 19 10 18 65 17 17 43.28 11.76 85.7 0 3 2 Whitelist GACA-CN 0.68 0.9 0 0 0.64 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 8 80936461 141686980 8 11 925 2 5 0 1 3 0.07 0 51 0 0 51 6 7 110 6 8 43.28 96.44 0.14 0 7 8 Whitelist GACA-CN 10 0.54 0 0 0 0.48 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 19 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 9 124358782 139913770 4 4 925 1 3 0 0 0 0.11 0.61 9 0 0 9 7 9 47 19 27 43.28 75.72 23.57 0 3 4 Whitelist GACA-CN 0.54 0.82 0 0 0.48 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 10 6484853 104269465 2 9 925 0 2 1 1 5 0.57 0.94 34 0 0 34 9 16 47 11 11 43.28 65.45 34.44 0 3 4 Whitelist GACA-CN 8 0.68 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 11 44848631 47205339 3 3 925 0 1 1 1 0 0.8 1 3 0 0 NA NA NA 38 19 29 43.28 19.19 80.25 0 2 3 Whitelist GACA-CN 0.87 1 0 0 0.84 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 12 69368404 70874948 2 4 925 0 2 0 0 2 0.11 0.35 3 0 0 NA NA NA 46 9 18 43.28 9.91 85.88 0 2 3 Whitelist GACA-CN 3 0.54 0.6 0 0 0.48 0 Linked to low confidence GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA With other complex events 6 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 13 23805570 111156371 1 23 925 0 20 0 0 3 0 0.18 14 0 0 14 5 14 15 5 15 43.28 100 0 0 3 5 Whitelist GACA-CN 10 0 0.39 0 0 0 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 43 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 14 32885928 104456204 2 6 925 0 6 0 0 0 0 0.57 25 0 0 25 5 13 36 5 13 43.28 96.02 1 0 3 4 Whitelist GACA-CN 0.04 0.8 0 0 0.03 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 15 45800968 46482929 4 4 925 0 4 0 0 0 0.01 0.11 6 0 0 6 0 4 45 7 7 43.28 59.02 40.84 0 2 3 Whitelist GACA-CN 0.21 0.28 0 0 0.16 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 16 353528 81417990 1 22 925 4 13 0 0 5 0 1 27 0 0 27 10 26 29 10 10 43.28 37.62 57.83 0 2 3 Whitelist GACA-CN 3 0.08 1 0 0 0 0 Linked to low confidence GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA With other complex events 39 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 17 73066208 73085583 2 2 925 0 0 1 1 0 0.57 0.26 4 0 0 4 3 4 28 4 8 43.28 6.87 93.12 0 3 1 Whitelist GACA-CN 0.68 0.51 0 0 0.64 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 18 26736270 68720210 2 10 925 0 8 0 0 2 0 1 25 0 0 25 10 13 33 10 14 43.28 91.2 8.77 0 2 1 Whitelist GACA-CN 4 0.01 1 0 0 0 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 18 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 19 13638720 16712207 2 4 925 0 2 1 1 0 0.57 0.64 6 0 0 6 3 4 18 5 8 43.28 10.73 89.1 0 3 4 Whitelist GACA-CN 0.68 0.85 0 0 0.64 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 8 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 20 54484132 59744669 7 7 925 0 7 0 0 0 0 0 7 0 0 7 0 4 47 7 9 43.28 49.46 42.51 0 4 5 Whitelist GACA-CN 0.02 0 0 0 0.01 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 21 15416236 38755580 1 6 925 1 5 0 0 0 0.01 0.13 10 0 0 10 10 10 12 12 12 43.28 66.02 11.33 0 1 2 Whitelist GACA-CN 0.25 0.32 0 0 0.19 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 22 30724996 44456013 5 6 925 2 1 1 1 1 0.9 0.76 5 0 0 5 3 5 7 3 3 43.28 1.05 98.95 0 2 0 Whitelist GACA-CN 0.93 0.92 0 0 0.92 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00033 X 42682141 44222938 2 2 925 0 2 0 0 0 0.11 0.08 2 0 0 NA NA NA 40 15 38 43.28 95.67 4.33 0 1 2 Whitelist GACA-CN 0.54 0.24 0 0 0.48 0 No GACA-CN CGP_donor_GC00033 GACA 0.49 2.4 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 GACA-CN DO218030 CGP_donor_GC00033 male alive C26.8 no treatment 61 849 849 Smoking history not documented NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 27.93 GACA-CN::CGP_donor_GC00037 1 NA NA 0 0 58 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.25 NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 2 141985801 142304858 2 2 58 0 0 1 1 0 0.57 0.24 2 NA 0 NA NA NA NA NA NA 38.61 0.13 99.78 0 1 2 Whitelist GACA-CN 0.68 0.47 NA 0 0.64 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 3 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 4 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 5 1319082 156319495 1 7 58 3 0 1 0 3 0.11 0 6 0 0 6 6 6 7 7 7 38.61 24.32 73.02 0 1 2 Whitelist GACA-CN 12 0.47 0.02 0 0 0.48 0 Linked to low confidence GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA Canonical without polyploidization 11 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 6 42680451 42994425 1 1 58 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 38.61 99.64 0.18 0 1 2 Whitelist GACA-CN 0.62 0.51 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 7 139073413 140349693 1 1 58 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 38.61 0 99.75 0 2 NA Whitelist GACA-CN 0.62 0.63 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 8 14272871 22971825 2 9 58 0 0 1 1 7 0.57 0 6 0 0 6 3 6 13 5 5 38.61 24.75 75.24 0 1 0 Whitelist GACA-CN 12_5 0.85 0 0 0 0.64 0 Linked to low confidence GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA With other complex events 11 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 9 21910693 22755302 1 1 58 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 38.61 99.3 0 0 0 1 Whitelist GACA-CN 0.62 0.9 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 10 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 11 69586512 69922018 1 1 58 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 38.61 99.57 0 0 3 4 Whitelist GACA-CN 0.62 0.76 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 12 20006408 108461993 7 17 58 1 0 3 3 10 0.28 0 13 0 0 13 5 8 26 10 10 38.61 12.58 87.4 6 2 1 Whitelist GACA-CN 0.68 0 0 0 0.59 0 Low confidence GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA With other complex events 24 0.21 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 13 NA NA 0 0 58 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.9 NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 14 NA NA 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 1 NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 15 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 16 9258013 24837875 2 2 58 0 0 1 1 0 0.57 0.67 4 NA 0 4 4 4 5 5 5 38.61 8.26 91.65 0 1 2 Whitelist GACA-CN 0.68 0.87 NA 0 0.64 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 17 14920328 18216021 1 3 58 1 0 0 0 2 0.39 0.02 4 0 0 4 4 4 8 8 8 38.61 22.84 71.91 2 1 2 Whitelist GACA-CN 0.62 0.08 0 0 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 18 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 19 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 20 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 21 15548037 47944368 1 4 58 1 0 1 1 1 0.8 0.01 6 0 0 6 6 6 8 8 8 38.61 66.88 10.09 0 1 2 Whitelist GACA-CN 1 0.03 0 0 0.84 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 22 28441282 30627100 1 1 58 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 38.61 100 0 0 1 NA Whitelist GACA-CN 0.62 0.74 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00037 X 33234399 33616858 1 1 58 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 38.61 99.77 0 0 0 1 Whitelist GACA-CN 0.62 0.62 NA NA 0.59 0 No GACA-CN CGP_donor_GC00037 GACA 0.72 1.65 Stomach-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 GACA-CN DO217818 CGP_donor_GC00037 female alive C26.8 no treatment 80 1302 1302 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Stomach-AdenoCA GACA CN 1 42.83 GACA-CN::CGP_donor_GC00046 1 32761833 73705363 1 2 76 0 2 0 0 0 0.11 0.52 1 0 0 NA NA NA NA NA NA 5.55 0 100 0 2 NA Whitelist GACA-CN 0.54 0.76 0 0 0.48 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 2 1867022 1904577 1 1 76 0 1 0 0 0 0.39 0.41 1 0 NA NA NA NA NA NA NA 5.55 0 99.91 0 2 NA Whitelist GACA-CN 0.62 0.66 0 NA 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 3 65668584 174665542 1 5 76 3 2 0 0 0 0.14 0.66 1 0 0 NA NA NA NA NA NA 5.55 0 99.86 0 2 NA Whitelist GACA-CN 0.62 0.86 0 0 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 10 0.07 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 4 131883010 131920039 1 1 76 0 1 0 0 0 0.39 0.82 1 NA NA NA NA NA NA NA NA 5.55 0 99.8 0 2 NA Whitelist GACA-CN 0.62 0.96 NA NA 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 5 58979330 104623193 1 4 76 2 2 0 0 0 0.26 1 1 0 0 NA NA NA NA NA NA 5.55 0 99.86 0 2 NA Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 8 0.05 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 6 NA NA 0 0 76 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.25 NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 7 16729519 44834218 1 3 76 0 2 0 0 1 0.11 1 1 0.08 0 NA NA NA NA NA NA 5.55 0 99.77 0 2 NA Whitelist GACA-CN 0.62 1 0.09 0 0.48 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 5 0.03 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 8 89916057 129045896 1 6 76 3 2 0 0 1 0.14 0.01 3 0 0 NA NA NA NA NA NA 5.55 0.05 99.94 0 2 4 Whitelist GACA-CN 0.54 0.03 0 0 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 11 0.07 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 9 9945704 10214704 1 1 76 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.55 0 99.3 0 2 NA Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 10 62613110 77504895 10 10 76 0 4 3 3 0 0.31 0 11 0 0 11 5 11 14 5 12 5.55 7.7 92.12 0 2 4 Whitelist GACA-CN 0.62 0 0 0 0.59 0 Low confidence GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA With other complex events 20 0.13 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 11 29447334 131819442 3 3 76 0 1 0 2 0 0.3 0.41 3 0 0 NA NA NA NA NA NA 5.55 5.41 94.16 0 2 4 Whitelist GACA-CN 0.62 0.65 0 0 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 12 NA NA 0 0 76 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist GACA-CN NA 0.04 0 NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 13 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 14 NA NA 0 0 76 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.91 NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 15 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 16 18161446 31468604 2 2 76 0 1 1 0 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 5.55 0 99.91 0 2 NA Whitelist GACA-CN 0.68 0.17 0 0 0.64 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 17 16299160 62738725 1 2 76 0 2 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 5.55 0 100 0 2 NA Whitelist GACA-CN 0.54 1 NA 0 0.48 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 18 NA NA 0 0 76 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.9 NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 19 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 20 14179966 14441801 1 1 76 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 5.55 0.42 98.55 0 2 3 Whitelist GACA-CN 0.62 0.88 NA NA 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 22 45665505 45709200 1 1 76 0 1 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 5.55 0 100 0 2 NA Whitelist GACA-CN 0.62 0.81 NA NA 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00046 X 9922896 124918582 1 3 76 1 2 0 0 0 0.3 1 1 0.03 0 NA NA NA NA NA NA 5.55 100 0 0 1 NA Whitelist GACA-CN 0.62 1 0.03 0 0.59 0 No GACA-CN CGP_donor_GC00046 GACA 0.92 1.94 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO222288 CGP_donor_GC00046 male alive C26.8 no treatment 67 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 1 26335498 206855061 2 38 187 0 0 2 2 34 0.26 0 24 0 0 24 5 11 25 5 11 40.86 75.5 24.5 0 3 1 Whitelist GACA-CN 5 0.82 0 0 0 0.59 1 Linked to low confidence GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA With other complex events 42 0.11 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 2 NA NA 0 0 187 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0 NA NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 3 60381902 60659054 2 2 187 2 0 0 0 0 0.11 0.09 6 0 0 6 5 6 13 5 5 40.86 0.49 99.39 0 1 0 Whitelist GACA-CN 0.54 0.24 0 0 0.48 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 4 85852183 113544875 1 6 187 2 1 1 0 2 0.57 0 8 0 0 8 3 5 20 8 11 40.86 83.11 14.32 0 4 1 Whitelist GACA-CN 0.62 0.02 0 0 0.64 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 5 6115950 152429287 10 29 187 3 2 2 3 19 0.94 0 19 0 0 19 6 10 22 9 13 40.86 64.91 34.96 0 1 2 Whitelist GACA-CN 1 0.74 0 0 0 0.96 1 Low confidence GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA With other complex events 39 0.1 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 6 126655613 128654606 1 2 187 1 1 0 0 0 0.57 0.06 4 0.03 0 4 3 4 6 3 4 40.86 0.2 96.97 0 2 1 Whitelist GACA-CN 0.68 0.19 0.03 0 0.64 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 7 110625273 110678205 1 1 187 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 40.86 0 99.78 0 2 NA Whitelist GACA-CN 0.62 0.01 NA NA 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 8 65287254 138950505 7 36 187 2 1 1 3 29 0.67 0 24 0 0 24 4 9 31 6 7 40.86 99.93 0.07 0 3 4 Whitelist GACA-CN 1_5 0.54 0 0 0 0.74 1 Low confidence GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA With other complex events 43 0.11 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 9 9211891 130428433 1 4 187 3 1 0 0 0 0.11 0.26 2 0.15 0 NA NA NA NA NA NA 40.86 99.47 0.4 0 2 3 Whitelist GACA-CN 0.54 0.5 0.15 0 0.48 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 10 NA NA 0 0 187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 11 NA NA 0 0 187 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.54 0 NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 12 12825652 13212764 1 1 187 1 0 0 0 0 0.39 0.23 2 0 NA NA NA NA 6 3 5 40.86 24.86 71.46 0 3 4 Whitelist GACA-CN 0.62 0.46 0 NA 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 13 20671166 113982594 7 13 187 2 2 2 1 6 0.93 0 17 0 0 17 7 11 17 7 11 40.86 12.07 87.93 1 2 4 Whitelist GACA-CN 0.9 0 0 0 0.95 1 High confidence GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA With other complex events 20 0.05 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 14 NA NA 0 0 187 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist GACA-CN NA 0.54 NA NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 15 NA NA 0 0 187 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.62 0 NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 16 NA NA 0 0 187 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist GACA-CN NA 0.96 0 NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 17 17688614 19570736 1 1 187 1 0 0 0 0 0.39 0.82 2 0.03 NA NA NA NA 4 4 4 40.86 5.09 94.91 0 1 2 Whitelist GACA-CN 0.62 0.96 0.03 NA 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 18 24545729 24667005 1 1 187 0 0 1 0 0 0.39 0.04 1 0 0 NA NA NA 6 6 6 40.86 66.33 33.64 0 2 NA Whitelist GACA-CN 0.62 0.13 0 0 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 19 11165972 11187289 1 1 187 1 0 0 0 0 0.39 0.19 1 0 NA NA NA NA 5 3 5 40.86 21.13 78.7 0 1 NA Whitelist GACA-CN 0.62 0.41 0 NA 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 20 48880594 49266013 1 1 187 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 40.86 0.61 98.42 0 2 3 Whitelist GACA-CN 0.62 0.42 NA NA 0.59 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 21 NA NA 0 0 187 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.91 NA NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 22 23885004 50315664 12 16 187 3 5 2 2 4 0.57 0 12 0 0 12 3 7 15 3 8 40.86 53.83 45.26 0 2 3 Whitelist GACA-CN 13 0.62 0 0 0 0.64 1 Linked to high confidence GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA With other complex events 28 0.07 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00047 X NA NA 0 0 187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00047 GACA 0.38 2.11 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_T_C,CN:2 2 GACA-CN DO218443 CGP_donor_GC00047 male alive C26.8 no treatment 58 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Daily Drinker Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 1 18855864 246310325 1 6 76 3 2 0 1 0 0.34 0.39 8 0 0 8 5 8 9 5 8 14.99 34.34 65.66 0 3 2 Whitelist GACA-CN 0.62 0.64 0 0 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 12 0.08 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 2 153386276 223737419 1 2 76 1 1 0 0 0 0.57 0.09 4 NA 0 4 3 4 5 3 3 14.99 0.04 99.87 0 2 1 Whitelist GACA-CN 0.68 0.25 NA 0 0.64 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 3 3877471 135573295 1 3 76 2 1 0 0 0 0.3 1 4 0 0 4 3 4 5 3 5 14.99 0.18 99.77 0 2 0 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 4 171741990 186180599 3 3 76 0 0 1 2 0 0.3 0 6 0 0 6 6 6 17 17 17 14.99 2.84 96.94 0 1 2 Whitelist GACA-CN 0.62 0.02 0 0 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 5 11707657 163262518 1 6 76 4 0 1 1 0 0.11 0.48 10 0 0 10 8 10 11 9 9 14.99 0.74 99.12 0 2 1 Whitelist GACA-CN 0.54 0.72 0 0 0.48 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 12 0.08 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 6 1944868 147965133 1 4 76 4 0 0 0 0 0.01 0.22 6 0 0 6 6 6 9 7 7 14.99 0.26 99.5 0 1 2 Whitelist GACA-CN 0.21 0.46 0 0 0.16 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 8 0.05 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 7 110902087 111109188 1 1 76 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 14.99 0.13 99.84 0 1 2 Whitelist GACA-CN 0.62 0.41 NA NA 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 8 79408599 143184494 1 2 76 1 1 0 0 0 0.57 0.8 2 0 0 NA NA NA NA NA NA 14.99 99.7 0.19 0 2 3 Whitelist GACA-CN 0.68 0.95 0 0 0.64 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 9 24911070 26078583 1 2 76 1 1 0 0 0 0.57 0.77 3 NA 0 NA NA NA NA NA NA 14.99 0.13 99.82 0 2 1 Whitelist GACA-CN 0.68 0.93 NA 0 0.64 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 10 10372579 60018656 1 2 76 2 0 0 0 0 0.11 0.78 1 0 0 NA NA NA NA NA NA 14.99 0 99.93 1 2 NA Whitelist GACA-CN 0.54 0.94 0 0 0.48 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 11 22681141 22833192 1 1 76 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 14.99 0.11 99.75 0 1 2 Whitelist GACA-CN 0.62 0.51 NA NA 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 12 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 13 68588318 74368191 2 4 76 1 1 1 1 0 1 0.02 9 0 0 9 0 3 10 0 0 14.99 5.02 80.83 0 4 2 Whitelist GACA-CN 1 0.07 0 0 1 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 8 0.05 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 14 87294537 87312192 1 1 76 0 1 0 0 0 0.39 0.74 1 NA NA NA NA NA 4 4 4 14.99 2.21 82.79 0 2 NA Whitelist GACA-CN 0.62 0.91 NA NA 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 2 0.01 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 15 73873123 79363456 4 4 76 2 2 0 0 0 0.26 0.16 5 0 0 5 3 5 5 3 3 14.99 4.53 80.06 0 2 1 Whitelist GACA-CN 0.62 0.37 0 0 0.59 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 8 0.05 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 16 78464024 78719340 1 3 76 3 0 0 0 0 0.03 0.05 2 0 0 NA NA NA NA NA NA 14.99 0.28 99.54 0 1 2 Whitelist GACA-CN 0.41 0.17 0 0 0.33 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 17 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 18 37039993 37287119 1 2 76 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 14.99 0.06 99.91 0 2 1 Whitelist GACA-CN 0.54 1 NA 0 0.48 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 19 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 20 14596217 15335986 1 3 76 3 0 0 0 0 0.03 0.22 4 0 0 4 4 4 5 5 5 14.99 98.82 1.09 0 2 3 Whitelist GACA-CN 0.41 0.46 0 0 0.33 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 6 0.04 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 22 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 0 0 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00048 X 6867989 95988746 1 2 76 2 0 0 0 0 0.11 0.59 1 NA 0.04 NA NA NA NA NA NA 14.99 100 0 0 1 NA Whitelist GACA-CN 0.54 0.81 NA 0.04 0.48 0 No GACA-CN CGP_donor_GC00048 GACA 0.41 2.03 Stomach-AdenoCA NA 4 0.03 NA 2 GACA-CN DO218769 CGP_donor_GC00048 male alive C26.8 no treatment 55 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 1 32164458 236360311 4 9 223 1 2 1 0 5 0.57 0.02 17 0 0 17 8 9 29 8 10 35.25 47.21 52.79 0 3 4 Whitelist GACA-CN 0.97 0.09 0 0 0.64 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 13 0.03 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 False positive; manually removed GACA-CN::CGP_donor_GC00049 2 38992040 239452123 1 13 223 1 8 1 2 1 0.01 0.47 17 0 0 17 5 13 19 5 5 35.25 51.56 45.76 0 3 2 Whitelist GACA-CN 0.41 0.71 0 0 0.19 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 25 0.06 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 3 192992431 194000445 3 3 223 0 2 0 1 0 0.3 0.06 5 0 0 5 3 5 30 7 8 35.25 73.1 23.84 0 4 3 Whitelist GACA-CN 0.62 0.2 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 6 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 4 124988003 135030636 3 5 223 1 1 1 0 2 0.8 1 7 0 0 7 5 7 25 5 11 35.25 25.66 71.97 0 2 3 Whitelist GACA-CN 0.68 1 0 0 0.84 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 8 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 5 142092416 176677966 1 7 223 0 3 0 0 4 0.03 0.13 8 0 0 8 5 8 11 5 9 35.25 33.98 63.34 0 2 3 Whitelist GACA-CN 0.41 0.32 0 0 0.33 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 10 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 6 1130603 137503755 1 5 223 1 3 0 0 1 0.11 0.03 7 0.01 0 7 7 7 7 7 7 35.25 0.81 98.95 0 2 3 Whitelist GACA-CN 0.62 0.12 0.01 0 0.48 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 9 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 7 143253 142604649 1 14 223 3 4 0 1 6 0.17 0.37 17 0 0 17 6 10 17 6 6 35.25 71.22 28.55 0 3 2 Whitelist GACA-CN 0.68 0.62 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 22 0.05 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 8 27054403 125982857 4 6 223 0 2 1 1 2 0.57 0.54 10 0 0 10 4 4 13 4 4 35.25 2.08 97.91 0 2 3 Whitelist GACA-CN 0.68 0.77 0 0 0.64 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 10 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 9 36218275 140415360 1 4 223 1 3 0 0 0 0.11 0.12 7 0 0 7 5 7 7 5 7 35.25 1.7 97.7 0 2 3 Whitelist GACA-CN 0.54 0.3 0 0 0.48 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 8 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 10 75318651 123936407 1 7 223 1 3 1 1 1 0.57 0.42 10 0 0 10 3 5 12 3 5 35.25 30 66.57 0 2 0 Whitelist GACA-CN 0.62 0.67 0 0 0.64 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 13 0.03 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 11 117926678 118234645 2 2 223 0 2 0 0 0 0.11 0.42 3 0 0 NA NA NA 20 5 6 35.25 5.2 94.37 0 2 3 Whitelist GACA-CN 0.54 0.67 0 0 0.48 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 4 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 12 57753271 58520743 3 3 223 0 1 0 2 0 0.3 0.15 3 0 0 NA NA NA 16 11 11 35.25 26.59 69.67 0 2 3 Whitelist GACA-CN 0.62 0.35 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 6 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 13 77887112 113980690 1 4 223 2 2 0 0 0 0.26 0.46 4 0 0 4 0 3 6 4 4 35.25 37.63 48.22 0 2 3 Whitelist GACA-CN 0.62 0.7 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 8 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 14 23308302 85346177 1 3 223 0 2 1 0 0 0.3 0.17 3 0 0 NA NA NA 4 3 4 35.25 1.37 83.63 0 2 3 Whitelist GACA-CN 0.62 0.39 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 6 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 15 45128326 90764653 1 5 223 0 2 1 1 1 0.57 0.84 4 0 0 4 3 4 5 3 3 35.25 0.53 84.06 0 2 3 Whitelist GACA-CN 0.93 0.97 0 0 0.64 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 9 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 16 10731264 11293718 3 6 223 1 0 1 1 3 0.8 0 3 0 0 NA NA NA 12 3 3 35.25 25.24 74.58 0 1 19 Whitelist GACA-CN 1 0.62 0 0 0 0.84 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 9 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 17 37667417 38524970 7 11 223 2 2 1 2 4 0.93 0 6 0 0 6 0 5 23 4 6 35.25 38.09 57.46 0 5 2 Whitelist GACA-CN 0.68 0 0 0 0.95 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 18 0.04 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 18 56336170 56643988 1 1 223 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 35.25 75.67 19.69 0 3 5 Whitelist GACA-CN 0.62 0.12 NA NA 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 2 0 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 19 2225717 50804118 1 7 223 0 3 0 0 4 0.03 0.09 11 0 0 11 0 5 13 3 5 35.25 92.3 0.43 0 1 4 Whitelist GACA-CN 7 0.77 0.25 0 0 0.33 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 10 0.02 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 20 35705753 36262025 3 3 223 1 1 1 0 0 0.8 0 4 0 0 4 3 4 20 5 6 35.25 56.18 37.44 0 4 3 Whitelist GACA-CN 0.87 0.01 0 0 0.84 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 6 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 21 42901211 42924206 1 1 223 0 0 0 1 0 0.39 0.76 1 0 NA NA NA NA 4 0 0 35.25 1.06 76.29 0 7 NA Whitelist GACA-CN 0.62 0.92 0 NA 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 2 0 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 22 40821330 47118012 1 3 223 0 2 0 0 1 0.11 0.02 5 0 0 5 4 5 6 4 6 35.25 1.64 74.58 0 2 3 Whitelist GACA-CN 0.41 0.07 0 0 0.48 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 5 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00049 X 152801464 154486354 3 3 223 0 2 1 0 0 0.3 0.44 1 0 0 NA NA NA NA NA NA 35.25 99.49 0 0 1 NA Whitelist GACA-CN 0.62 0.69 0 0 0.59 0 No GACA-CN CGP_donor_GC00049 GACA 0.23 2.18 Stomach-AdenoCA NA 6 0.01 NA 2 GACA-CN DO217896 CGP_donor_GC00049 male alive C26.8 no treatment 69 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 40 yes Occassional Drinker (< once a month) Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 1 1108283 11182500 6 6 153 1 2 2 1 0 0.88 0.02 9 0 0 9 3 3 24 5 14 51.65 44.6 55.39 0 2 0 Whitelist GACA-CN 0.93 0.09 0 0 0.91 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 2 11348370 235875388 1 6 153 2 4 0 0 0 0.06 0.11 5 0 0 5 3 4 6 3 3 51.65 97.18 0.13 0 3 2 Whitelist GACA-CN 0.54 0.28 0 0 0.48 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 3 126900801 175155736 1 2 153 1 1 0 0 0 0.57 0.15 4 0 0 4 3 4 9 3 5 51.65 1.25 98.58 0 2 1 Whitelist GACA-CN 0.68 0.36 0 0 0.64 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 4 6562799 54327194 1 4 153 0 2 0 0 2 0.11 0.2 6 0 0 6 4 5 7 4 4 51.65 0.25 99.74 0 5 6 Whitelist GACA-CN 0.68 0.42 0 0 0.48 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 5 432820 180050250 1 3 153 1 2 0 0 0 0.3 0.03 9 0.42 0 9 3 6 10 3 6 51.65 29.6 69.91 0 2 4 Whitelist GACA-CN 0.62 0.1 0.42 0 0.59 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 6 29810114 130082588 1 4 153 1 3 0 0 0 0.11 0.61 6 0 0 6 5 6 6 5 5 51.65 99.83 0 0 4 6 Whitelist GACA-CN 0.54 0.82 0 0 0.48 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 7 16802388 73859143 1 5 153 0 5 0 0 0 0 0.59 6 0 0 6 3 4 8 4 6 51.65 97.45 0 0 4 5 Whitelist GACA-CN 0.1 0.81 0 0 0.07 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 8 80685617 119245911 1 3 153 0 3 0 0 0 0.03 0.2 4 0 0 4 4 4 4 4 4 51.65 65.78 34.21 0 2 4 Whitelist GACA-CN 0.41 0.42 0 0 0.33 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 9 137413257 140068176 1 3 153 1 1 0 0 1 0.57 1 3 0 0 NA NA NA 7 5 5 51.65 1.55 97.78 0 2 3 Whitelist GACA-CN 0.62 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 10 11576216 115181449 5 7 153 2 2 1 0 2 0.53 0 19 0 0 19 3 5 23 4 5 51.65 79.16 20.65 0 2 3 Whitelist GACA-CN 0.68 0.02 0 0 0.64 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 11 2179419 118614150 7 11 153 2 2 2 1 4 0.93 0 20 0 0 20 3 5 24 4 6 51.65 87.05 8.8 2 4 1 Whitelist GACA-CN 0.87 0 0 0 0.95 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 18 0.06 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 12 42334379 69913259 1 2 153 0 2 0 0 0 0.11 0.05 4 NA 0 4 4 4 5 5 5 51.65 0.31 99.61 0 2 5 Whitelist GACA-CN 0.54 0.17 NA 0 0.48 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 13 35466380 56706647 1 5 153 0 3 0 0 2 0.03 0.26 8 0 0 8 3 7 12 5 5 51.65 97.22 0 0 4 5 Whitelist GACA-CN 0.45 0.5 0 0 0.33 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 14 21272588 92492048 1 4 153 1 0 0 1 2 0.57 0.49 6 0 0 6 0 4 9 0 3 51.65 96.28 0 0 1 3 Whitelist GACA-CN 0.68 0.73 0 0 0.64 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 15 NA NA 0 0 153 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.7 NA NA NA 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 16 2749490 88319564 1 6 153 0 2 0 2 2 0.26 0.31 13 0.3 0 13 3 6 15 3 6 51.65 15.12 80.06 0 2 3 Whitelist GACA-CN 0.54 0.56 0.3 0 0.59 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 17 36806629 64931709 1 5 153 0 3 0 0 2 0.03 0.61 3 0 0 NA NA NA 7 3 4 51.65 67.07 28.5 0 4 6 Whitelist GACA-CN 0.45 0.83 0 0 0.33 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 18 NA NA 0 0 153 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA 0.69 NA NA NA 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 19 22484533 30685012 8 9 153 3 0 1 4 1 0.17 0 11 0 0 11 0 3 25 5 5 51.65 16.16 83.37 0 2 4 Whitelist GACA-CN 0.62 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 20 62014988 62816740 2 2 153 0 0 1 1 0 0.57 0.05 3 0 0 NA NA NA 9 6 9 51.65 93.24 0.19 0 2 5 Whitelist GACA-CN 0.68 0.16 0 0 0.64 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 21 34188038 34957489 1 1 153 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 51.65 1.6 75.75 0 2 5 Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 22 41682677 50835964 1 2 153 0 2 0 0 0 0.11 0.11 2 0 0 NA NA NA 5 3 5 51.65 1.13 97.95 0 2 4 Whitelist GACA-CN 0.54 0.29 0 0 0.48 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00050 X 93825986 94043196 1 1 153 1 0 0 0 0 0.39 0.46 1 0 NA NA NA NA NA NA NA 51.65 100 0 0 1 NA Whitelist GACA-CN 0.62 0.7 0 NA 0.59 0 No GACA-CN CGP_donor_GC00050 GACA 0.16 2.8 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578455_G_C,CN:2 2 GACA-CN DO218774 CGP_donor_GC00050 male alive C26.8 no treatment 63 180 180 Current smoker (includes daily smokers non-daily/occasional smokers) 30 yes Not Documented Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 1 35621136 57612642 3 5 134 2 0 0 1 2 0.3 0.26 3 0 0 NA NA NA 22 6 6 60.68 49.21 47.46 0 3 2 Whitelist GACA-CN 0.93 0.5 0 0 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 2 63608611 63792329 1 1 134 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 3 7 60.68 99.89 0 0 0 3 Whitelist GACA-CN 0.62 0.01 NA NA 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 3 60305607 189428992 1 12 134 8 1 0 1 2 0 0.06 23 0 0 23 9 19 25 9 13 60.68 25.69 74.19 0 2 1 Whitelist GACA-CN 0.21 0.19 0 0 0.05 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 22 0.08 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 4 186071869 186368987 4 4 134 2 1 0 1 0 0.57 0.02 9 0 0 9 5 5 16 6 6 60.68 97.79 2.2 0 4 3 Whitelist GACA-CN 0.68 0.09 0 0 0.64 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 5 51482229 73637320 1 3 134 3 0 0 0 0 0.03 0.48 6 0 0 6 4 6 10 4 4 60.68 59.52 37.81 0 1 2 Whitelist GACA-CN 0.41 0.72 0 0 0.33 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 6 63165226 65691735 1 2 134 1 1 0 0 0 0.57 0.03 2 NA 0 NA NA NA 4 3 3 60.68 97.17 0 0 3 NA Whitelist GACA-CN 0.68 0.1 NA 0 0.64 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 7 92558514 104742174 5 7 134 1 1 2 1 2 0.9 0 10 0 0 10 3 4 25 5 5 60.68 64.25 35.52 0 2 18 Whitelist GACA-CN 0.77 0 0 0 0.92 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 8 17487490 100043198 1 6 134 4 0 1 1 0 0.11 1 8 0 0 8 8 8 10 9 9 60.68 99.99 0 0 3 4 Whitelist GACA-CN 0.54 1 0 0 0.48 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 9 5342589 6876344 2 2 134 0 0 1 1 0 0.57 0.37 1 0 0 NA NA NA 9 7 9 60.68 99.09 0.2 0 3 NA Whitelist GACA-CN 0.68 0.62 0 0 0.64 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 10 68229061 99052941 1 4 134 1 1 1 0 1 0.8 0.68 5 0 0 5 3 4 7 3 4 60.68 99.69 0.11 0 4 2 Whitelist GACA-CN 1 0.88 0 0 0.84 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 11 84229528 85212266 1 1 134 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 60.68 0.73 98.85 0 1 2 Whitelist GACA-CN 0.62 0.09 NA NA 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 12 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 13 33848277 34047338 1 1 134 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 3 60.68 99.83 0.17 0 2 3 Whitelist GACA-CN 0.62 0.26 NA NA 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 14 67865588 93097062 1 2 134 2 0 0 0 0 0.11 0.8 4 0 0 4 4 4 7 7 7 60.68 1.16 97.92 0 1 2 Whitelist GACA-CN 0.54 0.95 0 0 0.48 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 15 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 16 78545611 78697987 2 2 134 2 0 0 0 0 0.11 0.18 4 0 0 4 3 4 13 5 11 60.68 99.69 0.2 0 3 1 Whitelist GACA-CN 0.54 0.39 0 0 0.48 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 17 37965582 38029963 1 1 134 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 60.68 99.92 0.08 0 2 3 Whitelist GACA-CN 0.62 1 NA NA 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 18 19251444 73165002 2 5 134 0 1 0 1 3 0.57 0 15 0 0 15 5 6 20 5 5 60.68 10.41 84.95 0 2 1 Whitelist GACA-CN 0.62 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 19 1216708 34970164 1 3 134 1 2 0 0 0 0.3 0.75 6 0.42 0.01 6 3 5 7 3 5 60.68 6.37 93.45 0 2 3 Whitelist GACA-CN 0.62 0.92 0.43 0.01 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 20 36323246 57952019 4 5 134 2 1 1 0 1 0.57 0 8 0 0 8 5 8 18 7 7 60.68 92.16 0.81 0 5 6 Whitelist GACA-CN 0.68 0 0 0 0.64 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 21 21606876 47824758 1 7 134 0 2 0 2 3 0.26 0 3 0 0 NA NA NA NA NA NA 60.68 20.84 55.88 0 1 2 Whitelist GACA-CN 0.68 0 0 0 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 22 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00051 X 5836851 155033490 1 6 134 3 1 0 1 1 0.28 1 5 0 0 5 3 5 5 3 5 60.68 86.37 13.47 0 1 2 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00051 GACA 0.55 2.74 Stomach-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 2 GACA-CN DO217822 CGP_donor_GC00051 male alive C26.8 no treatment 65 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 1 19092876 246545905 1 13 309 5 6 0 0 2 0.01 0.14 19 0 0 19 8 16 21 8 8 34.44 44.72 55.27 0 2 1 Whitelist GACA-CN 0.54 0.33 0 0 0.2 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 24 0.04 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 2 5620025 231799627 1 17 309 4 11 0 1 1 0 0.12 28 0 0 28 7 22 29 7 7 34.44 14.37 85.54 1 2 3 Whitelist GACA-CN 0.1 0.31 0 0 0.03 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 33 0.05 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 3 24890549 172014587 1 13 309 6 6 0 0 1 0.01 0.15 21 0 0 21 6 19 21 6 6 34.44 16.53 83.44 0 2 1 Whitelist GACA-CN 0.18 0.35 0 0 0.16 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 25 0.04 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 4 20858263 181547735 1 13 309 0 5 0 0 8 0 0.49 4 0 0 4 4 4 5 5 5 34.44 0.35 99.4 0 2 3 Whitelist GACA-CN 7 0.62 0.74 0 0 0.07 0 Linked to low confidence GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA Canonical without polyploidization 18 0.03 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 5 27412537 146675144 2 7 309 2 2 1 1 1 0.88 0.81 13 0 0 13 5 6 15 5 8 34.44 64.64 32.3 0 2 3 Whitelist GACA-CN 0.77 0.96 0 0 0.91 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 13 0.02 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 6 90014618 90219792 2 2 309 0 0 1 1 0 0.57 0.07 2 0 0 NA NA NA 8 8 8 34.44 26.88 72.89 0 1 2 Whitelist GACA-CN 0.68 0.21 0 0 0.64 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 7 42989699 154627590 48 54 309 5 12 16 15 6 0.1 0 62 0 0 62 6 6 64 6 9 34.44 58.08 41.65 0 2 1 Whitelist GACA-CN 4 0.54 0 0 0 0.48 0 Low confidence GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA With other complex events 102 0.17 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 8 55493108 128169100 9 11 309 2 1 3 3 2 0.75 0.01 9 0 0 9 3 5 22 4 7 34.44 63.39 36.6 0 2 3 Whitelist GACA-CN 0.74 0.06 0 0 0.83 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 20 0.03 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 9 130900126 139810356 1 2 309 0 2 0 0 0 0.11 0.04 4 0 0 4 4 4 7 6 7 34.44 78.86 20.44 0 2 3 Whitelist GACA-CN 0.54 0.13 0 0 0.48 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 10 3781375 135410646 1 13 309 6 4 1 0 2 0.04 0.59 14 0 0 14 5 6 14 5 6 34.44 9.32 90.52 0 2 3 Whitelist GACA-CN 0.62 0.81 0 0 0.41 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 24 0.04 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 11 31037208 77145599 1 7 309 1 2 1 1 2 0.9 0.28 9 0 0 9 3 5 12 3 6 34.44 17.51 81.93 0 2 0 Whitelist GACA-CN 16 0.77 0.52 0 0 0.92 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 12 0.02 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 12 40846044 40969246 2 2 309 0 0 1 1 0 0.57 0.42 2 0 0 NA NA NA 15 9 9 34.44 0.7 99.22 0 2 3 Whitelist GACA-CN 0.68 0.67 0 0 0.64 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 13 19864590 57971984 1 4 309 1 3 0 0 0 0.11 0.08 8 0 0 8 4 5 11 4 5 34.44 81.11 4.74 0 3 4 Whitelist GACA-CN 0.54 0.24 0 0 0.48 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 8 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 14 64742866 106826106 1 7 309 1 3 2 1 0 0.67 0.62 7 0 0 7 3 5 8 3 3 34.44 38.59 45.93 0 2 3 Whitelist GACA-CN 0.77 0.84 0 0 0.74 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 14 0.02 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 15 44700030 77034583 1 2 309 0 2 0 0 0 0.11 0.01 3 NA 0 NA NA NA NA NA NA 34.44 0.01 84.58 0 2 3 Whitelist GACA-CN 0.54 0.06 NA 0 0.48 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 16 599389 82149360 1 16 309 6 7 1 0 2 0.01 0.01 15 0 0 15 7 11 17 7 7 34.44 3.88 96.03 1 2 1 Whitelist GACA-CN 0.21 0.03 0 0 0.26 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 30 0.05 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 17 12424105 77979315 1 11 309 1 5 0 1 4 0.04 0.38 10 0 0 10 4 10 11 4 11 34.44 27.84 67.71 0 2 3 Whitelist GACA-CN 0.62 0.63 0 0 0.38 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 18 0.03 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 18 NA NA 0 0 309 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 0 0 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 19 3341734 38808270 1 2 309 0 2 0 0 0 0.11 0.54 2 0.03 0 NA NA NA NA NA NA 34.44 0.31 99.25 0 2 3 Whitelist GACA-CN 0.54 0.77 0.03 0 0.48 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 20 14435295 15306037 6 6 309 6 0 0 0 0 0 0.01 8 0 0 8 4 5 14 5 5 34.44 98.44 0.58 0 0 2 Whitelist GACA-CN 0.04 0.04 0 0 0.03 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 12 0.02 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 21 15959382 46300731 7 11 309 2 3 0 2 4 0.44 0 7 0 0 7 5 7 7 5 5 34.44 11.87 65.17 0 2 0 Whitelist GACA-CN 0.74 0 0 0 0.64 0 Low confidence GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA Canonical without polyploidization 18 0.03 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 22 37743026 38006766 1 1 309 0 1 0 0 0 0.39 0.19 2 0 NA NA NA NA 11 11 11 34.44 39.53 36.69 0 1 2 Whitelist GACA-CN 0.62 0.41 0 NA 0.59 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 2 0 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00052 X 135136629 135191995 2 2 309 0 0 1 1 0 0.57 0.9 3 0 0 NA NA NA 7 7 7 34.44 99.58 0.23 0 1 2 Whitelist GACA-CN 0.68 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00052 GACA 0.44 2.18 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7578505_-_G,CN:1 2 GACA-CN DO218136 CGP_donor_GC00052 male alive C26.8 no treatment 71 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 1 28343417 246846232 1 15 317 3 6 0 0 6 0.01 0.35 29 0 0 29 7 9 34 7 7 92.3 100 0 0 6 3 Whitelist GACA-CN 0.25 0.6 0 0 0.21 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 2 78592600 78642954 2 2 317 2 0 0 0 0 0.11 0.61 5 0 0 5 3 5 42 13 13 92.3 97.04 0 0 4 3 Whitelist GACA-CN 0.54 0.83 0 0 0.48 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 3 60649524 175474395 1 8 317 7 0 0 0 1 0 0.02 13 0 0 13 4 8 20 4 8 92.3 96.83 0 1 6 5 Whitelist GACA-CN 0.06 0.08 0 0 0.01 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 4 92080970 154345347 1 4 317 2 0 1 1 0 0.57 0.02 8 0 0 8 4 5 17 5 7 92.3 99.85 0 0 3 1 Whitelist GACA-CN 0.68 0.07 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 5 903681 38887042 2 3 317 0 0 1 1 1 0.57 1 9 0 0 9 3 3 29 5 9 92.3 99.23 0.62 0 5 9 Whitelist GACA-CN 0.62 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 6 1724327 26218653 3 6 317 6 0 0 0 0 0 0.1 21 0 0 21 4 4 47 4 5 92.3 96.78 0.39 0 6 4 Whitelist GACA-CN 0.04 0.26 0 0 0.03 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 7 67611601 146186590 2 4 317 1 1 0 0 2 0.57 1 16 0 0 16 3 5 25 4 7 92.3 97.45 0 0 5 4 Whitelist GACA-CN 0.62 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 8 27840903 28573229 6 8 317 2 2 0 2 2 0.57 1 6 0 0 6 3 3 18 3 5 92.3 78.22 17.87 0 4 5 Whitelist GACA-CN 0.87 1 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 9 20747983 134250798 1 9 317 2 1 0 0 6 0.3 0.88 11 0 0 11 3 5 12 3 4 92.3 99.19 0.11 0 3 4 Whitelist GACA-CN 1 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 10 36002652 126198011 2 7 317 2 0 2 2 1 0.57 0.23 18 0 0 18 5 7 23 5 5 92.3 99.76 0.17 0 4 6 Whitelist GACA-CN 0.96 0.46 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 11 2146712 108655817 1 13 317 1 6 0 0 6 0 0.79 22 0 0 22 5 7 25 5 7 92.3 99.57 0 0 5 4 Whitelist GACA-CN 0.21 0.94 0 0 0.09 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 12 20220646 80014159 1 12 317 1 4 0 0 7 0.04 0.51 21 0 0 21 3 5 26 3 5 92.3 96.26 0 0 6 8 Whitelist GACA-CN 0.54 0.75 0 0 0.36 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 13 39597021 104940825 11 12 317 5 4 0 2 1 0.15 0.06 23 0 0 23 5 10 31 5 5 92.3 96.75 0.4 0 5 3 Whitelist GACA-CN 0.54 0.2 0 0 0.59 0 Low confidence GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA With other complex events 23 0.04 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 14 45685164 102237771 1 6 317 1 1 0 0 4 0.57 0.63 6 0 0 6 3 6 11 4 4 92.3 87.64 8.65 0 2 4 Whitelist GACA-CN 0.62 0.84 0 0 0.64 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 15 22423718 86405146 1 9 317 0 4 1 1 3 0.11 0.39 14 0 0 14 3 5 16 4 4 92.3 95.09 0 0 6 4 Whitelist GACA-CN 0.62 0.64 0 0 0.48 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 16 6148409 78675635 1 7 317 4 2 1 0 0 0.17 1 13 0 0 13 3 5 14 3 5 92.3 98.96 0.04 0 4 3 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 17 30745389 74129107 1 10 317 2 2 0 0 6 0.26 0.38 12 0 0 12 4 8 13 4 4 92.3 95.55 0 0 4 3 Whitelist GACA-CN 0.68 0.63 0 0 0.59 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 18 1608546 71962999 33 36 317 9 9 6 9 3 0.85 0 66 0 0 66 6 10 67 7 10 92.3 95.27 0.02 16 3 6 Whitelist GACA-CN 0.99 0 0 0 0.89 0 Low confidence GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA With other complex events 69 0.11 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 19 7995138 50027952 1 3 317 0 2 1 0 0 0.3 1 10 0 0 10 3 5 13 3 3 92.3 65.18 27.3 0 7 2 Whitelist GACA-CN 0.62 1 0 0 0.59 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 20 14646390 15167998 3 3 317 3 0 0 0 0 0.03 0 5 0 0 5 0 3 38 3 4 92.3 98.88 0.15 0 4 1 Whitelist GACA-CN 0.41 0 0 0 0.33 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 21 NA NA 0 0 317 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 22 29155998 36913333 1 2 317 0 2 0 0 0 0.11 0.06 2 0 0 NA NA NA 8 3 6 92.3 88.89 0 0 4 7 Whitelist GACA-CN 0.54 0.19 0 0 0.48 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00053 X 6712154 124935547 1 5 317 1 3 0 1 0 0.28 0.07 11 0 0 11 5 8 14 5 5 92.3 96.47 0.14 1 5 7 Whitelist GACA-CN 0.62 0.21 0 0 0.59 0 No GACA-CN CGP_donor_GC00053 GACA 0.35 4.48 Stomach-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577508_C_T,CN:3 6 GACA-CN DO218223 CGP_donor_GC00053 female alive C26.8 no treatment 47 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 1 20036804 231461837 14 28 550 1 6 3 4 14 0.29 0.02 67 0 0 67 5 11 76 5 11 86.88 97.13 2.87 1 4 6 Whitelist GACA-CN 12_19 0.62 0.07 0 0 0.59 1 Linked to high confidence GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA With other complex events 42 0.04 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 2 43269137 43491836 5 5 550 1 3 0 1 0 0.28 0.04 8 0 0 8 0 4 77 5 5 86.88 82.54 14.76 0 5 8 Whitelist GACA-CN 0.62 0.13 0 0 0.59 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 10 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 3 187654480 188111020 3 3 550 0 3 0 0 0 0.03 0.62 4 0 0 4 3 4 61 5 8 86.88 96.78 0.16 0 7 6 Whitelist GACA-CN 0.41 0.83 0 0 0.33 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 6 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 4 8023194 97167752 2 4 550 0 0 1 1 2 0.57 0 11 0 0 11 5 7 25 5 7 86.88 87.48 12.43 0 3 1 Whitelist GACA-CN 17 0.62 0.01 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 6 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 5 131935545 132339628 8 8 550 1 4 1 2 0 0.39 0.43 10 0 0 10 3 7 40 9 11 86.88 96.97 0.33 0 5 3 Whitelist GACA-CN 0.62 0.68 0 0 0.59 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 16 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 6 158357532 158508147 2 5 550 1 0 0 1 3 0.57 0.93 3 0 0 NA NA NA 47 7 11 86.88 99.82 0.03 0 5 6 Whitelist GACA-CN 0.68 1 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 7 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 7 97919849 98156573 4 4 550 1 3 0 0 0 0.11 0.39 6 0 0 6 3 4 57 7 9 86.88 96.47 0.98 0 14 6 Whitelist GACA-CN 0.54 0.64 0 0 0.48 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 8 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 8 90636924 91058771 2 2 550 2 0 0 0 0 0.11 0.85 8 0 0 8 3 4 49 4 5 86.88 67.07 28.98 0 5 3 Whitelist GACA-CN 0.54 0.98 0 0 0.48 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 4 0 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 9 26548853 130597305 1 7 550 3 2 0 1 1 0.34 0.01 12 0 0 12 4 7 13 4 7 86.88 96.83 0.07 0 4 3 Whitelist GACA-CN 0.77 0.04 0 0 0.59 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 13 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 10 76812689 77324922 2 2 550 1 1 0 0 0 0.57 0.31 2 0 0 NA NA NA 33 5 7 86.88 96.37 0.13 0 2 6 Whitelist GACA-CN 0.68 0.56 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 4 0 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 11 7783797 85700498 9 16 550 5 2 1 1 7 0.19 0 52 0 0 52 7 7 68 7 7 86.88 87.05 9.18 0 5 6 Whitelist GACA-CN 0.54 0 0 0 0.59 1 High confidence GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA With other complex events 25 0.02 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 12 18101997 94069586 8 10 550 2 1 3 2 2 0.8 0.19 24 0 0 24 7 20 32 7 22 86.88 99.92 0 1 3 4 Whitelist GACA-CN 0.96 0.41 0 0 0.84 1 High confidence GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA With other complex events 18 0.02 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 13 32335048 34301218 2 6 550 0 0 1 1 4 0.57 0.08 9 0 0 9 3 4 40 3 3 86.88 99.79 0.21 0 23 22 Whitelist GACA-CN X 0.68 0.22 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 8 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 14 75630671 75824961 4 5 550 0 3 1 0 1 0.11 0.71 3 0 0 NA NA NA 24 5 5 86.88 84.09 0 0 3 6 Whitelist GACA-CN 0.62 0.9 0 0 0.48 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 9 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 15 59261604 74736391 2 2 550 0 0 1 1 0 0.57 0.24 4 0 0 4 3 4 24 7 15 86.88 99.87 0 0 3 4 Whitelist GACA-CN 0.68 0.48 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 4 0 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 16 3055514 88866798 1 13 550 3 4 1 1 4 0.39 0.69 21 0 0 21 4 7 25 4 5 86.88 57.1 38.36 0 4 2 Whitelist GACA-CN 0.54 0.89 0 0 0.59 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 22 0.02 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 17 37680918 49117586 9 21 550 3 6 4 5 3 0.77 0 20 0 0 20 5 5 55 5 6 86.88 88.84 6.71 0 4 7 Whitelist GACA-CN 0.76 0 0 0 0.84 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 39 0.04 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 18 50189306 55719032 2 2 550 0 0 1 1 0 0.57 0.89 4 0 0 4 3 4 16 3 6 86.88 68.42 31.48 0 2 9 Whitelist GACA-CN 0.68 1 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 4 0 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 19 28404001 30805308 12 15 550 3 1 3 5 3 0.45 0 20 0 0 20 5 5 48 8 8 86.88 92.72 0.01 23 12 5 Whitelist GACA-CN 17 0.62 0 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 27 0.02 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 20 22304668 22720554 2 4 550 0 1 1 0 2 0.57 0 6 0 0 6 4 6 25 4 6 86.88 92.98 0 0 4 6 Whitelist GACA-CN 0.68 0.02 0 0 0.64 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 6 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 21 NA NA 0 0 550 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GACA-CN NA NA NA NA NA 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 0 0 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 22 30842436 51137191 1 9 550 0 5 0 0 4 0 0.11 11 0 0 11 3 6 13 3 7 86.88 81.67 6.9 0 4 6 Whitelist GACA-CN 11 0.15 0.28 0 0 0.07 1 Linked to high confidence GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA With other complex events 14 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GACA-CN::CGP_donor_GC00054 X 6801262 96637873 1 9 550 3 2 0 0 4 0.14 0 13 0 0 13 5 5 16 5 5 86.88 83.56 13.07 0 2 5 Whitelist GACA-CN 0.54 0 0 0 0.59 1 No GACA-CN CGP_donor_GC00054 GACA 0.34 4.27 Stomach-AdenoCA NA 14 0.01 NA 3 GACA-CN DO218547 CGP_donor_GC00054 female alive C26.8 no treatment 46 180 180 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Stomach-AdenoCA GACA CN 1 5.92 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 1 84794283 208813326 2 4 78 0 0 1 1 2 0.57 0 1 0 0 NA NA NA 9 9 9 35 5.67 94.33 0 2 NA Whitelist GBM-US 1 0.02 0 0 0.64 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 6 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 2 125559275 236107398 1 8 78 2 0 1 0 5 0.3 0.54 3 0 0 NA NA NA 4 4 4 35 4.52 95.39 0 1 2 Whitelist GBM-US 0.62 0.77 0 0 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 11 0.07 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 3 NA NA 0 0 78 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.21 0 NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 4 NA NA 0 0 78 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.96 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 5 124975324 165043091 1 3 78 3 0 0 0 0 0.03 0.49 3 0 0 NA NA NA NA NA NA 35 0.08 99.77 0 2 1 Whitelist GBM-US 0.41 0.73 0 0 0.33 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 6 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 6 134697175 134809989 1 1 78 1 0 0 0 0 0.39 0.03 1 0 NA NA NA NA 5 5 5 35 59.49 40.36 0 1 NA Whitelist GBM-US 0.62 0.1 0 NA 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 7 134478543 134490729 1 1 78 1 0 0 0 0 0.39 0.61 2 0 NA NA NA NA NA NA NA 35 99.77 0.01 0 2 3 Whitelist GBM-US 0.62 0.83 0 NA 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 8 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 9 NA NA 0 0 78 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.78 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 10 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 11 NA NA 0 0 78 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.81 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 12 NA NA 0 0 78 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.52 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 13 27708614 79444719 1 1 78 0 0 1 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 35 80.9 19.1 0 1 NA Whitelist GBM-US 0.62 0.03 0 NA 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 14 38144308 44923125 1 1 78 1 0 0 0 0 0.39 0.31 1 0 NA NA NA NA NA NA NA 35 11.79 87.29 0 2 NA Whitelist GBM-US 0.62 0.56 0 NA 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 15 NA NA 0 0 78 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.72 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 16 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 17 7417765 57239409 12 12 78 1 4 4 3 0 0.57 0 11 0 0 11 11 11 11 11 11 35 5.54 94.45 0 2 1 Whitelist GBM-US 0.68 0 0 0 0.64 1 High confidence GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM Canonical without polyploidization 24 0.15 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 18 NA NA 0 0 78 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.08 0 NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 19 5707797 41874756 2 7 78 1 0 1 0 5 0.57 0 8 0 0 8 6 8 9 6 6 35 82.14 17.69 0 2 3 Whitelist GBM-US 0.96 0.01 0 0 0.64 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 9 0.06 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 20 NA NA 0 0 78 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.89 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 21 NA NA 0 0 78 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.02 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 22 41947167 41971576 1 1 78 0 1 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 35 99.95 0.05 0 1 2 Whitelist GBM-US 0.62 0.82 NA NA 0.59 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::0078b0c4-68a9-483b-9aab-61156d263213 X NA NA 0 0 78 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.41 NA NA NA 1 No GBM-US 0078b0c4-68a9-483b-9aab-61156d263213 GBM 0.95 1.78 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 1 GBM-US DO11148 TCGA-14-1034 0078b0c4-68a9-483b-9aab-61156d263213 female deceased C71.9 60 485 NA NA Included CNS-GBM GBM US 1 15.95 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 1 8029070 111870442 1 18 98 0 1 0 2 15 0.3 0 9 0 0 9 4 9 9 4 4 25.79 2.11 97.88 0 2 1 Whitelist GBM-US 9 0.68 0 0 0 0.59 1 Linked to low confidence GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM With other complex events 21 0.11 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 2 43153736 239856839 1 2 98 1 1 0 0 0 0.57 0.58 2 0.4 0.06 NA NA NA 7 3 7 25.79 0.13 99.77 0 2 3 Whitelist GBM-US 0.68 0.81 0.4 0.06 0.64 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 3 190286860 191752811 1 1 98 0 0 0 1 0 0.39 0.69 1 0 NA NA NA NA 8 4 5 25.79 8.88 91.03 0 2 NA Whitelist GBM-US 0.62 0.89 0 NA 0.59 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 4 55141104 55215492 1 1 98 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 25.79 0.04 99.92 0 2 3 Whitelist GBM-US 0.62 0.06 NA NA 0.59 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 5 30169917 33114491 1 6 98 1 0 0 1 4 0.57 1 5 0 0 5 5 5 5 5 5 25.79 0.06 99.79 0 2 1 Whitelist GBM-US 6 0.68 1 0 0 0.64 1 Linked to high confidence GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM Canonical without polyploidization 8 0.04 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 6 5106696 142756791 15 20 98 1 4 5 5 5 0.41 0 17 0 0 17 10 17 21 12 21 25.79 19.46 80.3 0 1 2 Whitelist GBM-US 5 0.68 0 0 0 0.62 1 High confidence GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM With other complex events 35 0.18 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 7 145186197 145401825 1 1 98 1 0 0 0 0 0.39 0.37 2 0.01 NA NA NA NA 8 5 8 25.79 97.11 0.34 0 2 3 Whitelist GBM-US 0.62 0.62 0.01 NA 0.59 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 8 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 9 115736690 134498722 27 44 98 7 4 6 10 17 0.43 0 27 0 0 27 5 9 33 5 9 25.79 31.96 65.49 0 2 3 Whitelist GBM-US 0.89 0 0 0 0.64 1 Low confidence GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM With other complex events 71 0.36 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 10 NA NA 0 0 98 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.33 NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 11 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 12 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 13 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 14 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 16 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 17 NA NA 0 0 98 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.76 NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 18 13949834 14000768 1 2 98 0 0 0 1 1 0.39 1 1 NA NA NA NA NA NA NA NA 25.79 17.83 82.13 0 2 NA Whitelist GBM-US 0.68 1 NA NA 0.59 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 3 0.02 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 19 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 20 NA NA 0 0 98 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.9 NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 21 21075806 34466407 1 2 98 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 25.79 0.11 77.24 0 2 1 Whitelist GBM-US 0.68 0.01 0 0 0.64 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 22 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::01a92062-967a-4900-8dc7-a5ecd3b3f8e2 X NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 GBM 0.2 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11382 TCGA-06-0171 01a92062-967a-4900-8dc7-a5ecd3b3f8e2 male deceased C71.9 65 399 NA NA Included CNS-GBM GBM US 1 13.12 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 1 24786349 25577234 1 2 85 1 1 0 0 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 15.88 0 100 0 2 NA Whitelist GBM-US 0.68 0.2 NA 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 2 176323 23468097 22 25 85 10 4 4 4 3 0.18 0 49 0 0 49 19 32 52 19 19 15.88 14.48 85.42 0 7 3 Whitelist GBM-US 0.62 0 0 0 0.59 1 High confidence GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM With other complex events 47 0.28 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 3 NA NA 0 0 85 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.32 NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 4 119598544 144881965 1 2 85 0 0 1 1 0 0.57 0.13 1 NA 0 NA NA NA NA NA NA 15.88 0.12 99.69 0 2 NA Whitelist GBM-US 0.68 0.32 NA 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 5 NA NA 0 0 85 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.74 0 NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 6 65008454 69176042 2 2 85 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA NA NA NA 15.88 0 99.85 0 2 NA Whitelist GBM-US 0.68 0.96 0 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 7 NA NA 0 0 85 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.84 NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 8 NA NA 0 0 85 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.33 NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 9 20385906 26602567 1 1 85 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 7 4 5 15.88 22.23 77.62 0 0 1 Whitelist GBM-US 0.62 0.51 NA NA 0.59 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 2 0.01 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 10 98859885 112033655 2 4 85 1 1 1 1 0 1 0.6 6 0 0 6 6 6 6 6 6 15.88 18.56 81.26 0 1 2 Whitelist GBM-US 1 0.81 0 0 1 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 8 0.05 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 11 103163596 109908563 2 2 85 1 0 1 0 0 0.57 0.8 6 0 0 6 6 6 8 8 8 15.88 14.62 84.96 0 1 2 Whitelist GBM-US 0.68 0.95 0 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 12 46537520 52174541 4 4 85 0 1 1 2 0 0.57 0.01 4 0 0 4 3 4 14 3 4 15.88 23.19 76.67 0 3 2 Whitelist GBM-US 0.68 0.03 0 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 8 0.05 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 13 20289812 114141768 7 7 85 1 3 2 1 0 0.67 0 9 0 0 9 9 9 10 10 10 15.88 45.92 50.62 3 2 1 Whitelist GBM-US 0.77 0.02 0 0 0.74 1 High confidence GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM Canonical without polyploidization 14 0.08 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 14 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 15 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 16 4221103 4893057 1 1 85 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 15.88 49.1 50.57 0 1 2 Whitelist GBM-US 0.62 0.91 NA NA 0.59 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 2 0.01 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 17 9290419 18636948 1 3 85 0 0 1 0 2 0.39 0.08 1 0.06 0 NA NA NA NA NA NA 15.88 0 100 0 2 NA Whitelist GBM-US 0.62 0.23 0.06 0 0.59 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 18 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 19 31200726 55793385 1 2 85 1 1 0 0 0 0.57 0.69 4 NA 0 4 3 4 5 3 3 15.88 0.3 99.53 0 2 1 Whitelist GBM-US 0.68 0.89 NA 0 0.64 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 4 0.02 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 20 NA NA 0 0 85 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.9 NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 21 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef 22 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::054f472f-98cb-4559-b2e2-b5f800fc8eef X NA NA 0 0 85 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 0 NA NA 1 No GBM-US 054f472f-98cb-4559-b2e2-b5f800fc8eef GBM 0.82 1.89 CNS-GBM NA 0 0 frameshift_deletion,17_7578512_-_TC,CN:2 2 GBM-US DO13971 TCGA-06-0221 054f472f-98cb-4559-b2e2-b5f800fc8eef male deceased C71.9 31 603 NA NA Included CNS-GBM GBM US 1 19.84 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 1 8762210 205453075 3 5 209 0 1 1 1 2 0.8 0.2 12 0 0 12 5 8 13 5 5 11.28 0.87 99.13 1 2 1 Whitelist GBM-US 0.68 0.42 0 0 0.84 0 Linked to low confidence GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM With other complex events 8 0.02 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 2 55343192 55392642 1 1 209 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 11.28 0.15 99.75 0 2 3 Whitelist GBM-US 0.62 0 NA NA 0.59 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 2 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 3 183615477 183945373 12 12 209 3 4 2 3 0 0.88 0.5 12 0 0 12 12 12 15 13 13 11.28 0.19 99.65 0 1 2 Whitelist GBM-US 0.93 0.74 0 0 0.91 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 24 0.06 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 False positive; manually removed GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 4 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 5 NA NA 0 0 209 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 6 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 7 32662310 139885081 1 6 209 1 4 0 1 0 0.11 0.64 12 0 0 12 3 5 17 5 5 11.28 99.6 0.18 0 3 49 Whitelist GBM-US 0.54 0.85 0 0 0.48 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 12 0.03 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 8 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 9 17843117 36219343 12 51 209 2 2 5 3 39 0.57 0 19 0 0 19 5 9 20 6 9 11.28 14.67 84.63 0 1 2 Whitelist GBM-US 1_10 0.93 0 0 0 0.64 0 Low confidence GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM With other complex events 63 0.15 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 10 5388962 135052041 68 116 209 20 17 16 15 48 0.84 0 59 0 0 59 19 29 59 19 19 11.28 94.76 4.95 1 1 2 Whitelist GBM-US 9 0.96 0 0 0 0.88 0 High confidence GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM With other complex events 184 0.44 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 11 85898796 85987011 1 1 209 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 5 5 5 11.28 0.07 99.5 0 2 NA Whitelist GBM-US 0.62 0 0 NA 0.59 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 2 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 12 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 13 100995274 101438894 1 1 209 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 11.28 0.39 99.61 0 2 3 Whitelist GBM-US 0.62 0.32 NA NA 0.59 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 2 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 14 39088482 40734516 4 4 209 0 1 2 1 0 0.57 1 3 0 0 NA NA NA 7 3 5 11.28 17.76 66.32 0 2 4 Whitelist GBM-US 0.68 1 0 0 0.64 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 8 0.02 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 15 29830675 50725774 1 2 209 2 0 0 0 0 0.11 0.14 4 NA 0 4 4 4 7 5 5 11.28 20.81 79.19 0 1 2 Whitelist GBM-US 0.54 0.33 NA 0 0.48 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 4 0.01 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 16 354065 84918810 1 3 209 1 2 0 0 0 0.3 0.39 6 0.01 0 6 3 6 7 3 3 11.28 0.67 99.23 0 2 3 Whitelist GBM-US 0.62 0.63 0.01 0 0.59 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 6 0.01 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 17 34053380 34138264 1 1 209 0 1 0 0 0 0.39 0.52 2 0 NA NA NA NA 7 7 7 11.28 0.92 99.07 0 2 3 Whitelist GBM-US 0.62 0.76 0 NA 0.59 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 2 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 18 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 19 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 20 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 21 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda 22 NA NA 0 0 209 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.76 NA NA NA 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 0 0 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::0798dbe2-1914-427c-a2fe-2a865d0d6eda X 38144734 123345818 1 2 209 1 0 0 1 0 0.57 0.01 4 0 0 4 4 4 5 5 5 11.28 0.21 99.79 0 1 2 Whitelist GBM-US 0.68 0.05 0 0 0.64 0 No GBM-US 0798dbe2-1914-427c-a2fe-2a865d0d6eda GBM 0.8 2.05 CNS-GBM NA 4 0.01 NA 2 GBM-US DO11441 TCGA-14-1459 0798dbe2-1914-427c-a2fe-2a865d0d6eda female deceased C71.9 63 378 NA NA Included CNS-GBM GBM US 1 12.43 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 1 2695318 36867510 54 54 92 16 11 14 13 0 0.81 0 27 0 0 27 13 20 28 13 13 14.31 2.95 97.05 1 2 1 Whitelist GBM-US 0.87 0 0 0 0.85 1 High confidence GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM With other complex events 108 0.59 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 2 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 3 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 4 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 5 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 6 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 7 37590136 58035420 21 21 92 7 1 7 6 0 0.19 0 18 0 0 18 11 12 18 11 11 14.31 97 0.45 0 3 2 Whitelist GBM-US 0.62 0 0 0 0.59 1 High confidence GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM Canonical without polyploidization 42 0.23 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 8 118191321 118323084 2 2 92 0 0 1 1 0 0.57 0.34 4 NA 0 4 4 4 5 5 5 14.31 0.03 99.96 0 1 2 Whitelist GBM-US 0.68 0.59 NA 0 0.64 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 4 0.02 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 9 19509981 23538620 1 1 92 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 3 3 14.31 48.44 50.86 0 0 1 Whitelist GBM-US 0.62 0.81 NA NA 0.59 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 10 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 11 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 12 52914062 52949768 1 1 92 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 14.31 0.03 99.89 0 2 3 Whitelist GBM-US 0.62 0.33 NA NA 0.59 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 13 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 14 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 15 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 16 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 17 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 18 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 19 NA NA 0 0 92 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.9 NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 20 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 21 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da 22 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::12824b2b-9c0a-4dcf-8941-34593a4e93da X NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 12824b2b-9c0a-4dcf-8941-34593a4e93da GBM 0.88 2 CNS-GBM NA 0 0 NA 2 GBM-US DO10900 TCGA-14-0786 12824b2b-9c0a-4dcf-8941-34593a4e93da female deceased C71.9 50 701 NA NA Included CNS-GBM GBM US 1 23.06 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 1 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 2 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 3 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 4 NA NA 0 0 93 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist GBM-US NA 0.08 NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 5 12763041 13074330 1 1 93 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 9 9 9 21.75 6.47 90.76 0 1 2 Whitelist GBM-US 0.62 0.97 0 NA 0.59 0 High confidence GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM Canonical without polyploidization 2 0.01 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 False negative; manually included GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 6 73337152 169358752 1 11 93 2 0 0 0 9 0.11 0 8 0 0 8 8 8 12 12 12 21.75 30.22 69.64 1 1 2 Whitelist GBM-US 0.41 0 0 0 0.48 0 High confidence GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM Canonical without polyploidization 13 0.07 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 False negative; manually included GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 7 NA NA 0 0 93 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.2 NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 8 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 9 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 10 51564294 52211328 1 1 93 0 0 0 1 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 21.75 68.34 28.32 0 1 2 Whitelist GBM-US 0.62 0.33 NA NA 0.59 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 2 0.01 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 11 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 12 57486350 69728850 57 58 93 11 14 15 17 1 0.73 0 39 0 0 39 3 6 54 9 9 21.75 36.74 63.18 9 1 4 Whitelist GBM-US 0.84 0 0 0 0.8 0 High confidence GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM Canonical without polyploidization 115 0.62 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 False negative; manually included GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 13 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 14 0 107349540 0 0 93 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist GBM-US NA 0.77 NA NA NA 0 High confidence GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM Canonical without polyploidization 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 False negative; manually included GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 15 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 16 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 17 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 18 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 19 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 20 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 21 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f 22 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::17dffffc-65d6-4209-9075-18a441001f0f X NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 17dffffc-65d6-4209-9075-18a441001f0f GBM 0.48 1.95 CNS-GBM NA 0 0 NA 49 GBM-US DO10970 TCGA-26-1438 17dffffc-65d6-4209-9075-18a441001f0f male alive C71.9 36 NA 305 NA Included CNS-GBM GBM US 0 10.03 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 1 NA NA 0 0 77 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.53 NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 2 NA NA 0 0 77 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.2 NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 3 187502331 189456546 2 2 77 0 0 1 1 0 0.57 0.18 3 NA 0 NA NA NA NA NA NA 21.42 0.03 99.94 0 2 1 Whitelist GBM-US 0.68 0.39 NA 0 0.64 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 4 0.03 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 4 54023338 114624830 4 4 77 0 2 1 1 0 0.57 0.65 7 0 0 7 3 5 10 4 4 21.42 2.71 97.28 0 3 5 Whitelist GBM-US 0.68 0.86 0 0 0.64 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 8 0.05 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 5 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 6 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 7 48836916 56169308 8 11 77 0 8 0 0 3 0 0 12 0 0 12 3 3 12 3 3 21.42 99.78 0 0 3 15 Whitelist GBM-US 0.03 0.01 0 0 0 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 19 0.12 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 8 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 9 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 10 74067253 74253748 1 1 77 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 21.42 99.83 0 0 1 NA Whitelist GBM-US 0.62 0.51 NA NA 0.59 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 2 0.01 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 11 59429173 121054281 3 3 77 1 0 1 1 0 0.8 0.17 3 0 0 NA NA NA NA NA NA 21.42 0.79 98.79 0 2 1 Whitelist GBM-US 0.87 0.39 0 0 0.84 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 6 0.04 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 12 2835782 133092445 44 45 77 10 9 12 13 1 0.82 0 28 0 0 28 5 5 28 5 5 21.42 64.96 34.39 1 1 2 Whitelist GBM-US 0.92 0 0 0 0.86 0 Low confidence GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM With other complex events 89 0.58 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 13 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 14 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 15 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 16 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 17 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 18 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 19 10189719 10411595 1 1 77 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.42 0.38 99.45 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 2 0.01 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 20 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 21 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 22 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 0 0 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 X 11314108 11830202 1 1 77 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 21.42 100 0 0 0 1 Whitelist GBM-US 0.62 0.41 NA NA 0.59 0 No GBM-US 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 GBM 0.87 1.89 CNS-GBM NA 2 0.01 NA 49 GBM-US DO13474 TCGA-26-5132 2c5fa2d4-8e35-42e4-8bca-9fb3371a19c8 male alive C71.9 74 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 1 166565184 227439671 1 4 212 1 1 0 0 2 0.57 0 5 0 0 5 5 5 5 5 5 14.95 0.77 99.23 0 2 3 Whitelist GBM-US 0.68 0 0 0 0.64 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 6 0.01 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 2 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 3 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 4 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 5 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 6 NA NA 0 0 212 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 7 54947532 55768719 49 87 212 13 11 12 13 38 0.97 0 10 0 0 10 3 3 11 3 3 14.95 99.78 0 3 49 3 Whitelist GBM-US 12 0.93 0 0 0 0.98 1 Linked to high confidence GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM With other complex events 136 0.32 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 8 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 9 NA NA 0 0 212 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.08 NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 10 64580508 90116358 4 6 212 2 0 1 1 2 0.57 0.51 3 0 0 NA NA NA 6 5 5 14.95 98.2 1.62 0 1 2 Whitelist GBM-US 0.68 0.75 0 0 0.64 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 10 0.02 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 11 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 12 57931744 69260398 100 138 212 29 25 22 24 38 0.79 0 25 0 0 25 7 8 30 7 7 14.95 11.25 88.67 0 1 49 Whitelist GBM-US 0.9 0 0 0 0.84 1 High confidence GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM With other complex events 238 0.56 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 13 103694067 105529905 1 1 212 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 14.95 1.59 98.41 0 1 2 Whitelist GBM-US 0.62 0.05 NA NA 0.59 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 2 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 14 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 15 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 16 84380369 85416136 1 1 212 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 14.95 1.15 98.76 0 2 3 Whitelist GBM-US 0.62 0.16 NA NA 0.59 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 2 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 17 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 18 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 19 NA NA 0 0 212 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.7 NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 20 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 21 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc 22 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::2f4a127f-101a-4192-b3e8-f9be2c8648bc X NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 2f4a127f-101a-4192-b3e8-f9be2c8648bc GBM 0.94 1.98 CNS-GBM NA 0 0 NA 49 GBM-US DO14049 TCGA-19-2624 2f4a127f-101a-4192-b3e8-f9be2c8648bc male deceased C71.9 51 5 NA NA Included CNS-GBM GBM US 1 0.16 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 1 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 2 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 3 115796519 115869342 1 1 46 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 23.98 0 99.99 0 2 NA Whitelist GBM-US 0.62 0.63 NA NA 0.59 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 4 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 5 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 6 95597045 100528911 1 2 46 0 0 0 1 1 0.39 1 1 NA NA NA NA NA NA NA NA 23.98 0 99.85 0 2 NA Whitelist GBM-US 0.68 1 NA NA 0.59 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 3 0.03 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 7 154053694 154220448 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 23.98 99.6 0.18 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 8 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 9 17888570 29115474 5 5 46 1 1 1 2 0 0.9 0 7 0 0 7 7 7 16 16 16 23.98 9.58 90.31 3 2 1 Whitelist GBM-US 0.93 0 0 0 0.92 1 Linked to high confidence GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM Canonical without polyploidization 10 0.11 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 10 89654389 126588044 1 2 46 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 23.98 99.78 0 0 1 0 Whitelist GBM-US 0.54 1 NA 0 0.48 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 4 0.04 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 13 41308861 100428481 1 2 46 2 0 0 0 0 0.11 0.67 2 NA 0 NA NA NA NA NA NA 23.98 51.33 48.67 0 1 2 Whitelist GBM-US 0.54 0.88 NA 0 0.48 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 4 0.04 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 14 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 15 29650077 30143067 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.98 0.48 99.39 0 1 2 Whitelist GBM-US 0.62 1 NA NA 0.59 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 16 3345948 59322371 4 17 46 2 0 1 1 13 0.57 0 17 0 0 17 17 17 20 20 20 23.98 78.63 21.26 0 2 1 Whitelist GBM-US 9 0.93 0 0 0 0.64 1 High confidence GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM Canonical without polyploidization 21 0.23 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 17 632113 29833425 1 3 46 3 0 0 0 0 0.03 0.13 6 0 0 6 6 6 7 7 7 23.98 1.01 98.99 0 1 2 Whitelist GBM-US 0.41 0.32 0.01 0 0.33 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 6 0.07 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 18 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 0 0 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::309005a2-93a8-4566-b8d3-6b9310144266 X 651858 836599 2 2 46 0 1 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 23.98 99.71 0 0 1 NA Whitelist GBM-US 0.68 0 0 0 0.64 1 No GBM-US 309005a2-93a8-4566-b8d3-6b9310144266 GBM 0.59 1.84 CNS-GBM NA 4 0.04 NA 2 GBM-US DO12382 TCGA-19-1389 309005a2-93a8-4566-b8d3-6b9310144266 male deceased C71.9 51 141 NA NA Included CNS-GBM GBM US 1 4.64 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 1 61818871 205256023 2 4 59 0 1 0 1 2 0.57 0.05 3 0 0 NA NA NA 11 9 9 14.81 1.71 98.29 0 3 2 Whitelist GBM-US 0.68 0.16 0 0 0.64 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 6 0.05 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 2 229378172 229491067 2 2 59 0 0 1 1 0 0.57 0.03 1 0 0 NA NA NA 13 9 9 14.81 1.36 98.54 0 2 NA Whitelist GBM-US 0.68 0.11 0 0 0.64 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 4 0.03 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 3 8892803 197436555 1 6 59 1 3 0 0 2 0.11 0.31 7 0 0 7 6 7 8 7 7 14.81 4.6 95.06 0 2 3 Whitelist GBM-US 0.54 0.55 0 0 0.48 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 10 0.08 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 4 159622176 163189445 1 2 59 2 0 0 0 0 0.11 0.29 4 0 0 4 4 4 7 5 5 14.81 0.65 99.33 0 1 2 Whitelist GBM-US 0.54 0.53 0 0 0.48 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 4 0.03 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 5 NA NA 0 0 59 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.81 NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 6 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 7 54858957 55223398 1 4 59 2 2 0 0 0 0.26 0.25 3 0 0 NA NA NA 8 3 3 14.81 99.78 0 0 336 352 Whitelist GBM-US 0.62 0.49 0 0 0.59 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 8 0.07 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 8 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 9 21935418 22324337 1 1 59 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 14.81 24.3 75.53 0 0 1 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 2 0.02 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 11 35529895 67270897 1 2 59 0 2 0 0 0 0.11 0.75 4 0 0 4 4 4 5 5 5 14.81 1.14 98.43 0 2 3 Whitelist GBM-US 0.54 0.92 0 0 0.48 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 4 0.03 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 12 57792099 130496389 1 9 59 1 2 0 0 6 0.3 0 7 0 0 7 3 5 8 3 3 14.81 1.29 98.62 0 2 1 Whitelist GBM-US 17 0.97 0.01 0 0 0.59 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 12 0.1 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 13 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 14 76928912 77738129 1 1 59 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.81 0.75 98.33 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 2 0.02 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 16 11288210 51061168 1 2 59 1 1 0 0 0 0.57 0.67 4 NA 0 4 4 4 5 5 5 14.81 1.78 98.08 0 2 3 Whitelist GBM-US 0.68 0.87 NA 0 0.64 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 4 0.03 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 17 40511462 66321807 1 10 59 0 1 1 0 8 0.57 0 5 0 0 5 5 5 7 7 7 14.81 2.58 97.4 0 3 2 Whitelist GBM-US 0.62 0 0 0 0.64 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 12 0.1 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 19 NA NA 0 0 59 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.58 NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 20 3687030 4511677 1 1 59 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.81 1.31 97.7 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 2 0.02 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 22 NA NA 0 0 59 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 10 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.03 NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::3258cb3b-f63b-463c-b2e4-d638149157c5 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3258cb3b-f63b-463c-b2e4-d638149157c5 GBM 0.81 2.09 CNS-GBM NA 0 0 NA 2 GBM-US DO13192 TCGA-06-0145 3258cb3b-f63b-463c-b2e4-d638149157c5 female deceased C71.9 53 71 NA NA Included CNS-GBM GBM US 1 2.34 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 1 8045939 17238285 1 4 65 0 0 0 1 3 0.39 0.35 3 0.1 0 NA NA NA NA NA NA 17.99 3.32 96.68 0 2 1 Whitelist GBM-US 19 0.68 0.61 0.11 0 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 5 0.04 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 2 240825998 241013845 1 1 65 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 17.99 0.08 99.81 0 1 2 Whitelist GBM-US 0.62 0.14 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 3 191082977 191532474 1 1 65 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 17.99 0.23 99.74 0 1 2 Whitelist GBM-US 0.62 0.25 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 4 148584038 166176935 10 10 65 3 1 3 3 0 0.75 0 7 0 0 7 7 7 9 9 9 17.99 0.5 99.48 0 2 1 Whitelist GBM-US 0.86 0.02 0 0 0.83 1 High confidence GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM Canonical without polyploidization 20 0.15 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 5 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 6 28240022 58510485 1 8 65 1 0 0 1 6 0.57 0.01 5 0 0 5 5 5 5 5 5 17.99 1.71 98.14 1 2 1 Whitelist GBM-US 19 1 0.03 0 0 0.64 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 10 0.08 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 7 54925270 87134604 4 12 65 2 3 0 3 4 0.39 0 13 0 0 13 6 6 18 6 6 17.99 14.11 85.69 0 2 3 Whitelist GBM-US 16 0.62 0 0 0 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 20 0.15 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 8 129073036 131091534 1 1 65 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 17.99 1.38 98.61 0 1 2 Whitelist GBM-US 0.62 0.51 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 9 23608996 30529652 1 1 65 0 1 0 0 0 0.39 0.52 3 NA NA NA NA NA 8 4 4 17.99 57.03 40.46 0 1 2 Whitelist GBM-US 0.62 0.76 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 10 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 11 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 12 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 13 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 14 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 15 101407405 101707103 1 1 65 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 17.99 0.29 99.55 0 1 2 Whitelist GBM-US 0.62 0.9 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 16 5184581 21565965 2 5 65 1 1 0 0 3 0.57 0 4 0 0 4 4 4 10 5 5 17.99 71.06 24.42 0 2 3 Whitelist GBM-US 7 0.93 0 0 0 0.64 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 7 0.05 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 17 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 18 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 19 15638459 54130439 2 10 65 0 0 2 0 8 0.11 0 11 0 0 11 11 11 12 12 12 17.99 67.71 32.12 0 2 3 Whitelist GBM-US 6 0.86 0 0 0 0.48 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 12 0.09 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 20 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 21 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a 22 46514572 46540042 1 1 65 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 17.99 100 0 0 1 NA Whitelist GBM-US 0.62 0.77 NA NA 0.59 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 2 0.02 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::352768f9-3ce1-419c-beef-6515c78f5d7a X NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 352768f9-3ce1-419c-beef-6515c78f5d7a GBM 0.67 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO12952 TCGA-19-2620 352768f9-3ce1-419c-beef-6515c78f5d7a male deceased C71.9 70 148 NA NA Included CNS-GBM GBM US 1 4.87 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 1 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 2 NA NA 0 0 114 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 3 126688674 182097458 54 55 114 14 11 15 14 1 0.88 0 18 0 0 18 5 18 30 9 9 27.03 51.52 48.32 1 3 2 Whitelist GBM-US 0.88 0 0 0 0.91 1 Low confidence GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM With other complex events 109 0.48 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 4 190173594 190422528 1 2 114 2 0 0 0 0 0.11 0.04 3 NA 0 NA NA NA 4 4 4 27.03 0.11 99.49 0 1 2 Whitelist GBM-US 0.54 0.13 NA 0 0.48 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 4 0.02 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 5 NA NA 0 0 114 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.31 NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 6 NA NA 0 0 114 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.07 NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 7 54421110 55221817 2 2 114 1 0 0 1 0 0.57 0.53 1 0 0 NA NA NA 5 3 3 27.03 99.78 0 0 49 NA Whitelist GBM-US 0.68 0.76 0 0 0.64 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 4 0.02 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 8 NA NA 0 0 114 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.32 NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 9 22442398 22851062 1 2 114 0 0 1 0 1 0.39 1 3 NA NA NA NA NA 8 5 5 27.03 34.26 62.66 0 0 1 Whitelist GBM-US 0.68 1 NA NA 0.59 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 3 0.01 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 10 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 11 122037798 122892696 1 2 114 1 0 0 0 1 0.39 0.18 3 NA NA NA NA NA NA NA NA 27.03 0.51 98.94 0 2 1 Whitelist GBM-US 0.68 0.4 NA NA 0.59 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 3 0.01 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 12 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 13 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 14 69559675 69601768 2 2 114 0 0 1 1 0 0.57 0.78 1 0 0 NA NA NA 5 5 5 27.03 72.41 27.08 0 2 NA Whitelist GBM-US 0.68 0.94 0 0 0.64 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 4 0.02 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 15 32981635 50483790 7 10 114 3 0 2 2 3 0.44 0 8 0 0 8 8 8 10 10 10 27.03 44.34 55.53 0 1 2 Whitelist GBM-US 0.62 0 0 0 0.64 1 High confidence GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM Canonical without polyploidization 17 0.07 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 16 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 17 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 18 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 19 NA NA 0 0 114 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 20 39751750 39784362 1 1 114 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 27.03 98.99 0 0 3 NA Whitelist GBM-US 0.62 0.76 NA NA 0.59 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 2 0.01 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 21 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 0 0 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e 22 22445020 51056576 13 14 114 2 4 3 4 1 0.84 0 9 0 0 9 9 9 11 11 11 27.03 3.66 95.85 4 2 1 Whitelist GBM-US 0.81 0 0 0 0.88 1 High confidence GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM Canonical without polyploidization 27 0.12 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::386b629e-fab1-4033-b088-45d6eeb4a13e X 32124323 32392834 1 1 114 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 27.03 100 0 0 0 1 Whitelist GBM-US 0.62 0.12 NA NA 0.59 1 No GBM-US 386b629e-fab1-4033-b088-45d6eeb4a13e GBM 0.82 1.88 CNS-GBM NA 2 0.01 NA 2 GBM-US DO12034 TCGA-06-0745 386b629e-fab1-4033-b088-45d6eeb4a13e male deceased C71.9 59 239 NA NA Included CNS-GBM GBM US 1 7.86 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 1 156844166 205329714 10 10 19 3 4 1 2 0 0.57 0 13 0 0 13 3 5 19 4 4 19.5 1.91 98.09 0 2 39 Whitelist GBM-US 0.68 0 0 0 0.64 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 20 0.53 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 5 174279660 174650604 1 1 19 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 7 5 7 19.5 0.3 97.02 0 1 2 Whitelist GBM-US 0.62 0.59 NA NA 0.59 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 2 0.05 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 9 21888375 22000810 1 1 19 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 19.5 0.08 99.21 0 0 2 Whitelist GBM-US 0.62 0.76 NA NA 0.59 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 2 0.05 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 12 46219260 46398950 1 1 19 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA 5 3 3 19.5 0.3 95.96 0 1 2 Whitelist GBM-US 0.62 0.81 NA NA 0.59 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 2 0.05 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::3f960d3b-a58c-43d0-a8a4-f3555b399c9d X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 3f960d3b-a58c-43d0-a8a4-f3555b399c9d GBM 0.65 1.92 CNS-GBM NA 0 0 NA 2 GBM-US DO12484 TCGA-06-5411 3f960d3b-a58c-43d0-a8a4-f3555b399c9d male deceased C71.9 51 254 NA NA Included CNS-GBM GBM US 1 8.36 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 1 241472646 248716663 1 19 90 1 2 3 0 13 0.34 0 5 0 0 5 3 5 8 4 4 91.4 98.29 1.49 0 2 49 Whitelist GBM-US 0.72 0 0 0 0.59 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 25 0.14 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 2 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 3 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 4 53282295 56136771 1 10 90 0 2 2 0 6 0.26 0.05 4 0 0 4 0 3 5 0 3 91.4 99.99 0 0 3 4 Whitelist GBM-US 0.68 0.17 0 0 0.59 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 14 0.08 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 5 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 6 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 7 38775890 63277725 11 12 90 1 3 3 4 1 0.63 0 18 0 0 18 3 4 19 4 4 91.4 96.9 0 0 5 49 Whitelist GBM-US 0.68 0.01 0 0 0.71 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 23 0.13 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 8 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 9 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 10 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 11 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 12 57657463 59700261 36 52 90 8 10 7 11 16 0.77 0 30 0 0 30 4 6 32 4 4 91.4 99.92 0 2 31 32 Whitelist GBM-US 0.68 0 0 0 0.84 0 Low confidence GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM With other complex events 88 0.49 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 13 NA NA 0 0 90 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.63 NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 14 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 16 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.91 NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 17 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 19 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 20 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 22 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::521ea765-1bd1-423d-a75d-091243df37a9 X 122020355 122051215 1 1 90 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 91.4 100 0 0 1 NA Whitelist GBM-US 0.62 0.25 NA NA 0.59 0 No GBM-US 521ea765-1bd1-423d-a75d-091243df37a9 GBM 0.84 4 CNS-GBM NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577538_T_C;17_7578550_T_G,CN:4 4 GBM-US DO12742 TCGA-02-2485 521ea765-1bd1-423d-a75d-091243df37a9 male alive C71.9 53 NA 470 NA Included CNS-GBM GBM US 0 15.46 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 1 53762747 203194606 1 3 110 0 3 0 0 0 0.03 0.28 6 0 0 6 6 6 7 7 7 23.29 0.28 99.72 1 2 3 Whitelist GBM-US 0.41 0.53 0 0 0.33 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 6 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 2 181607712 231250850 1 4 110 1 0 0 1 2 0.57 1 6 0 0 6 6 6 7 7 7 23.29 0.42 99.48 0 1 2 Whitelist GBM-US 0.68 1 0 0 0.64 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 6 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 3 10844845 192918928 1 8 110 1 2 0 0 5 0.3 0.85 7 0 0 7 5 7 7 5 5 23.29 0.52 99.43 0 2 3 Whitelist GBM-US 0.54 0.99 0 0 0.59 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 11 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 4 48138981 188922733 1 7 110 1 3 1 0 2 0.28 0.56 7 0 0 7 7 7 11 9 9 23.29 3.97 96.03 0 2 1 Whitelist GBM-US 0.62 0.79 0 0 0.59 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 12 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 5 NA NA 0 0 110 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.07 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 6 NA NA 0 0 110 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.2 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 7 157357370 157485751 3 3 110 1 0 1 1 0 0.8 0.67 1 0 0 NA NA NA NA NA NA 23.29 99.77 0 0 3 NA Whitelist GBM-US 0.87 0.87 0 0 0.84 0 High confidence GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM Canonical without polyploidization 6 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 False negative; manually included GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 8 138640456 139009203 2 2 110 0 0 1 1 0 0.57 0.19 2 NA 0 NA NA NA NA NA NA 23.29 0.24 99.75 0 1 2 Whitelist GBM-US 0.68 0.41 NA 0 0.64 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 9 18862868 22533659 21 24 110 1 9 5 6 3 0.1 0 3 0 0 NA NA NA 26 4 5 23.29 46.49 50.41 0 1 0 Whitelist GBM-US 2_4 0.54 0 0 0 0.48 0 High confidence GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM Canonical without polyploidization 45 0.2 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 False negative; manually included GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 10 121146748 121246314 1 1 110 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 23.29 99.75 0.07 0 1 2 Whitelist GBM-US 0.62 0.2 NA NA 0.59 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 11 3562334 45625794 1 2 110 0 2 0 0 0 0.11 0.49 4 NA 0.04 4 4 4 7 7 7 23.29 0.8 98.62 0 2 3 Whitelist GBM-US 0.54 0.74 NA 0.04 0.48 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 12 NA NA 0 0 110 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist GBM-US NA 0.96 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 13 NA NA 0 0 110 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.81 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 14 19009663 19020188 1 3 110 0 0 1 0 2 0.39 0.4 1 0 0 NA NA NA NA NA NA 23.29 0 99.09 0 2 NA Whitelist GBM-US 0.87 0.65 0 0 0.59 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 15 NA NA 0 0 110 0 0 0 0 0 NA 0.55 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.78 0 NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 16 49373709 66957834 1 3 110 0 2 0 1 0 0.3 0.54 6 0 0 6 6 6 7 7 7 23.29 0.78 99.13 0 2 3 Whitelist GBM-US 0.62 0.77 0 0 0.59 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 6 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 17 27691306 73603798 1 3 110 0 2 0 0 1 0.11 1 5 NA 0 5 3 4 7 4 4 23.29 43.42 56.57 0 3 2 Whitelist GBM-US 0.62 1 NA 0 0.48 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 5 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 18 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 19 NA NA 0 0 110 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 20 NA NA 0 0 110 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 21 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 22 17957931 18563936 4 8 110 2 0 0 2 4 0.26 0 3 0 0 NA NA NA 14 4 6 23.29 94.63 5.37 0 3 5 Whitelist GBM-US 0.62 0 0 0 0.59 0 High confidence GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM Canonical without polyploidization 12 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 False negative; manually included GBM-US::5613f5f6-086d-470b-8f77-6dcb7f8625b7 X NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5613f5f6-086d-470b-8f77-6dcb7f8625b7 GBM 0.9 2.07 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 2 GBM-US DO11860 TCGA-06-0744 5613f5f6-086d-470b-8f77-6dcb7f8625b7 male alive C71.9 66 NA 595 NA Included CNS-GBM GBM US 0 19.57 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 1 5376737 222191284 1 5 107 1 1 0 1 2 0.8 0.59 8 0 0 8 4 8 9 5 5 19.63 0.56 99.44 0 2 1 Whitelist GBM-US 0.93 0.81 0 0 0.84 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 8 0.04 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 2 237745609 237756703 1 2 107 0 1 0 0 1 0.39 0.03 3 NA NA NA NA NA 4 0 4 19.63 0.25 99.64 0 1 2 Whitelist GBM-US 0.54 0.12 NA NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 3 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 3 NA NA 0 0 107 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.03 NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 4 54735188 55541337 17 17 107 7 3 3 4 0 0.47 0 25 0 0 25 4 7 28 4 6 19.63 0.47 99.52 0 22 23 Whitelist GBM-US 0.68 0 0 0 0.64 0 Low confidence GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM With other complex events 34 0.16 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 5 164397128 165216508 1 2 107 2 0 0 0 0 0.11 0.69 2 0 0 NA NA NA 5 5 5 19.63 0.53 99.35 0 1 2 Whitelist GBM-US 0.54 0.89 0 0 0.48 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 6 118282394 158970762 1 5 107 1 0 1 1 2 0.8 0.69 6 0 0 6 6 6 7 7 7 19.63 0.47 99.39 0 1 2 Whitelist GBM-US 0.93 0.89 0 0 0.84 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 8 0.04 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 7 54304614 56720043 30 32 107 12 6 6 6 2 0.31 0 40 0 0 40 3 4 50 4 4 19.63 98.78 1 3 54 3 Whitelist GBM-US 6 0.68 0 0 0 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 62 0.29 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 8 3869914 4151980 1 2 107 1 1 0 0 0 0.57 0.18 4 NA 0 4 4 4 5 5 5 19.63 0.08 99.91 0 2 3 Whitelist GBM-US 0.68 0.4 NA 0 0.64 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 9 20593576 38007522 6 7 107 2 2 1 1 1 0.88 0.07 11 0 0 11 5 11 14 6 6 19.63 22.5 76.8 0 0 1 Whitelist GBM-US 0.77 0.21 0 0 0.91 0 Low confidence GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM With other complex events 13 0.06 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 10 64165241 64250142 1 1 107 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 19.63 99.76 0.06 0 1 2 Whitelist GBM-US 0.62 0.26 NA NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 11 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 12 50243669 130570759 1 3 107 2 1 0 0 0 0.3 1 7 0 0 7 7 7 7 7 7 19.63 1.05 98.87 0 2 1 Whitelist GBM-US 0.62 1 0 0 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 6 0.03 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 13 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 14 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 15 65241013 66197555 1 1 107 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 19.63 0.93 98.94 0 2 3 Whitelist GBM-US 0.62 0.63 NA NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 16 7169587 7205224 1 1 107 1 0 0 0 0 0.39 0.76 2 NA NA NA NA NA NA NA NA 19.63 0.04 99.87 0 1 2 Whitelist GBM-US 0.62 0.93 NA NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 17 28054711 28244660 1 1 107 1 0 0 0 0 0.39 0.77 1 0 NA NA NA NA NA NA NA 19.63 0.01 99.95 0 2 NA Whitelist GBM-US 0.62 0.93 0 NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 18 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 19 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 20 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 21 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 22 50005163 50223859 1 1 107 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA 4 3 3 19.63 15.6 84.4 0 1 NA Whitelist GBM-US 0.62 0.62 NA NA 0.59 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::5c984433-33cf-42fc-b3ba-511efcdcab19 X NA NA 0 0 107 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.4 NA NA NA 0 No GBM-US 5c984433-33cf-42fc-b3ba-511efcdcab19 GBM 0.73 2 CNS-GBM NA 0 0 NA 2 GBM-US DO11794 TCGA-06-0211 5c984433-33cf-42fc-b3ba-511efcdcab19 male deceased C71.9 47 360 NA NA Included CNS-GBM GBM US 1 11.84 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 1 153504097 153522723 1 1 143 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 31.86 97.02 0.01 0 2 3 Whitelist GBM-US 0.62 0 NA NA 0.59 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 2 NA NA 0 0 143 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.02 NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 3 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 4 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 5 NA NA 0 0 143 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 6 116229755 119001924 2 2 143 0 0 1 1 0 0.57 0.86 6 0 0 6 6 6 12 12 12 31.86 56.58 40.59 0 1 2 Whitelist GBM-US 0.68 0.99 0 0 0.64 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 4 0.01 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 7 4042990 157318473 103 106 143 23 26 27 27 3 0.94 0 109 0 0 109 8 13 110 8 8 31.86 34.73 62.53 3 4 3 Whitelist GBM-US 0.95 0 0 0 0.95 1 High confidence GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM With other complex events 209 0.73 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 8 32606199 32618488 1 1 143 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 31.86 0 99.99 0 2 NA Whitelist GBM-US 0.62 0.05 NA NA 0.59 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 9 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 10 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 11 29628901 35962036 5 5 143 1 3 0 1 0 0.28 0.55 4 0 0 4 3 4 7 3 3 31.86 0.26 99.31 0 2 1 Whitelist GBM-US 0.62 0.78 0 0 0.59 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 10 0.03 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 12 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 13 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 14 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 15 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 16 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 17 7435958 8210463 1 2 143 2 0 0 0 0 0.11 0.6 2 NA 0 NA NA NA NA NA NA 31.86 0.95 99.03 0 1 2 Whitelist GBM-US 0.54 0.81 NA 0 0.48 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 4 0.01 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 18 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 19 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 20 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 21 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 22 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c28f086-6a25-40b6-93eb-bba0014acda6 X NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c28f086-6a25-40b6-93eb-bba0014acda6 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO13318 TCGA-06-2557 6c28f086-6a25-40b6-93eb-bba0014acda6 male deceased C71.9 76 33 NA NA Included CNS-GBM GBM US 1 1.09 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 1 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 2 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 3 172994395 174625576 3 9 351 1 1 0 1 6 0.8 0.01 7 0 0 7 5 7 9 5 5 20.64 0.7 99.27 5 2 1 Whitelist GBM-US 19 0.97 0.05 0 0 0.84 1 Linked to high confidence GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM Canonical without polyploidization 12 0.02 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 4 129768712 190820043 7 15 351 1 4 1 1 8 0.28 0.2 11 0 0 11 11 11 13 13 13 20.64 2.1 97.71 0 2 1 Whitelist GBM-US 3_7_19 0.54 0.42 0 0 0.59 1 High confidence GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM Canonical without polyploidization 22 0.03 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 5 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 6 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 7 25188974 57134155 152 204 351 38 32 44 38 52 0.59 0 207 0 0 207 12 15 211 12 15 20.64 97.4 0 19 4 5 Whitelist GBM-US 19 0.68 0 0 0 0.67 1 High confidence GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM With other complex events 356 0.51 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 8 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 9 4759663 8150199 2 2 351 0 0 1 1 0 0.57 0 4 0.43 0 4 4 4 10 10 10 20.64 32.06 65.35 0 1 2 Whitelist GBM-US 0.68 0.02 0.43 0 0.64 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 10 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 11 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 12 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 13 21509016 84153058 3 3 351 0 2 1 0 0 0.3 0.04 6 0 0 6 6 6 10 9 9 20.64 61.03 38.97 0 1 2 Whitelist GBM-US 0.62 0.13 0 0 0.59 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 6 0.01 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 14 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 15 78897624 91856477 1 1 351 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 20.64 0 99.9 0 2 NA Whitelist GBM-US 0.62 0.01 NA NA 0.59 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 16 52423069 61187159 1 1 351 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 20.64 0 99.68 0 2 NA Whitelist GBM-US 0.62 0.04 NA NA 0.59 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 17 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 18 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 19 32306219 58943998 100 150 351 27 21 26 26 50 0.83 0 114 0 0 114 24 30 114 24 30 20.64 81.67 18.08 3 2 1 Whitelist GBM-US 3_7 0.87 0 0 0 0.87 1 High confidence GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM With other complex events 250 0.36 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 20 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 21 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 22 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6c5154d2-af36-492f-b520-d925528824e4 X NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 6c5154d2-af36-492f-b520-d925528824e4 GBM 0.86 2 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577138_G_C,CN:2 2 GBM-US DO13144 TCGA-32-1970 6c5154d2-af36-492f-b520-d925528824e4 male deceased C71.9 59 468 NA NA Included CNS-GBM GBM US 1 15.39 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 1 96136790 231004169 1 2 86 1 1 0 0 0 0.57 0.42 4 0.13 0 4 3 4 5 3 3 21.05 0.04 99.96 0 2 1 Whitelist GBM-US 0.68 0.67 0.13 0 0.64 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 2 NA NA 0 0 86 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.3 0 NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 3 55731014 55968728 1 3 86 0 1 0 0 2 0.39 0.39 2 0 0 NA NA NA 5 5 5 21.05 0.16 99.81 0 2 3 Whitelist GBM-US 0.87 0.64 0 0 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 4 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 5 NA NA 0 0 86 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.15 NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 6 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 7 25158117 55641317 1 3 86 0 3 0 0 0 0.03 0.81 5 0 0 5 0 3 9 5 5 21.05 97.42 0 0 4 5 Whitelist GBM-US 0.41 0.95 0 0 0.33 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 6 0.03 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 8 5893392 101787073 1 5 86 2 0 1 2 0 0.53 0.21 6 0 0 6 6 6 6 6 6 21.05 27.37 72.48 0 1 2 Whitelist GBM-US 0.68 0.44 0 0 0.64 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 10 0.06 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 9 21824229 132170506 1 3 86 1 1 0 0 1 0.57 0.58 5 0 0 5 3 5 6 3 3 21.05 30.06 69.8 0 2 0 Whitelist GBM-US 0.87 0.8 0 0 0.64 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 5 0.03 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 10 60567107 60896748 1 1 86 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 21.05 99.58 0.24 0 1 2 Whitelist GBM-US 0.62 0.41 NA NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 11 67579086 111622573 1 17 86 2 1 1 0 13 0.57 0 7 0 0 7 5 7 9 5 5 21.05 0.95 98.63 0 2 1 Whitelist GBM-US 0.93 0 0 0 0.64 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 21 0.12 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 12 NA NA 0 0 86 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.41 NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 13 36607414 110814419 1 3 86 0 3 0 0 0 0.03 0.77 6 0 0 6 6 6 7 7 7 21.05 0.43 99.57 0 2 3 Whitelist GBM-US 0.41 0.93 0 0 0.33 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 6 0.03 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 14 68081481 68145279 1 1 86 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 11 11 11 21.05 0.64 98.44 0 2 3 Whitelist GBM-US 0.62 0.01 0 NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 15 31156118 43672650 4 9 86 1 1 1 1 5 1 0 6 0 0 6 6 6 7 7 7 21.05 14.21 85.62 0 1 2 Whitelist GBM-US 0.97 0 0 0 1 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 13 0.08 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 16 NA NA 0 0 86 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 7 3 7 0 0 0 0 0 0 Whitelist GBM-US NA 0.23 NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 17 67430091 74562357 2 13 86 2 0 0 0 11 0.11 0 13 0 0 13 3 7 19 9 9 21.05 5.73 94.27 0 2 1 Whitelist GBM-US 11 0.9 0 0 0 0.48 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 15 0.09 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 18 48029039 48039653 1 1 86 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 21.05 0 99.96 0 2 NA Whitelist GBM-US 0.62 0.91 NA NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 19 702650 1271137 1 2 86 0 2 0 0 0 0.11 0 1 0.01 0 NA NA NA NA NA NA 21.05 0.29 99.54 0 2 NA Whitelist GBM-US 0.54 0.01 0.01 0 0.48 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 20 61495042 61622013 1 1 86 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 21.05 0 99.02 0 2 NA Whitelist GBM-US 0.62 0.69 NA NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 21 33907318 34986592 1 1 86 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.05 2.24 68.05 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b 22 26294317 26417867 1 1 86 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 7 4 4 21.05 2.26 97.74 0 3 5 Whitelist GBM-US 0.62 0.08 NA NA 0.59 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::6e6962d8-34b8-431c-8220-42b0b92a410b X NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 6e6962d8-34b8-431c-8220-42b0b92a410b GBM 0.86 1.91 CNS-GBM NA 0 0 NA 2 GBM-US DO13072 TCGA-16-1063 6e6962d8-34b8-431c-8220-42b0b92a410b male deceased C71.9 72 425 NA NA Included CNS-GBM GBM US 1 13.98 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 1 6546893 15481926 2 11 147 1 0 1 0 9 0.57 0 5 0 0 5 5 5 23 9 9 28.03 6.88 93.12 0 2 1 Whitelist GBM-US 19 0.62 0 0 0 0.64 1 Linked to high confidence GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM Canonical without polyploidization 13 0.04 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 2 NA NA 0 0 147 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 3 9984937 196135359 1 9 147 1 2 0 0 6 0.3 0.75 9 0 0 9 5 9 11 5 5 28.03 16.89 82.97 0 2 1 Whitelist GBM-US 1 0.97 0.91 0 0 0.59 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 12 0.04 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 4 NA NA 0 0 147 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 5 96224881 96298435 1 1 147 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 7 5 5 28.03 0.57 96.75 0 2 3 Whitelist GBM-US 0.62 0.04 NA NA 0.59 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 2 0.01 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 6 NA NA 0 0 147 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.46 0 NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 7 54704687 55417213 12 12 147 4 2 3 3 0 0.88 0 18 0 0 18 0 4 28 5 5 28.03 96.51 0.93 1 99 103 Whitelist GBM-US 0.93 0.02 0 0 0.91 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 24 0.08 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 8 NA NA 0 0 147 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.13 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 9 20472800 130048839 1 3 147 1 1 0 0 1 0.57 1 5 0 0 5 3 5 7 4 4 28.03 24.62 74.93 0 2 0 Whitelist GBM-US 0.87 1 0 0 0.64 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 5 0.02 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 10 NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 11 NA NA 0 0 147 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist GBM-US NA 0.07 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 12 9552836 125229522 1 3 147 1 2 0 0 0 0.3 0.17 9 0.58 0 9 3 9 10 3 3 28.03 96.09 0.23 0 3 2 Whitelist GBM-US 0.62 0.38 0.58 0 0.59 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 6 0.02 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 13 NA NA 0 0 147 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.2 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 14 102415526 105316111 1 2 147 0 2 0 0 0 0.11 0.47 5 0 0 5 3 5 7 3 5 28.03 0.36 98.72 0 2 17 Whitelist GBM-US 0.54 0.72 0 0 0.48 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 4 0.01 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 15 40649203 97539849 15 15 147 5 0 5 5 0 0.17 0 7 0 0 7 7 7 9 9 9 28.03 3.63 96.29 0 2 1 Whitelist GBM-US 0.62 0 0 0 0.59 1 High confidence GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM Canonical without polyploidization 30 0.1 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 16 79802921 82570805 2 3 147 0 1 0 1 1 0.57 0.01 5 0 0 5 5 5 9 7 7 28.03 4.35 95.55 0 2 1 Whitelist GBM-US 0.87 0.03 0 0 0.64 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 5 0.02 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 17 70355389 70381528 1 1 147 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 7 7 28.03 1 98.98 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 2 0.01 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 18 NA NA 0 0 147 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.42 NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 19 5516134 55780057 39 60 147 9 15 4 11 21 0.09 0 37 0 0 37 19 37 37 19 19 28.03 76.06 23.5 1 3 2 Whitelist GBM-US 0.62 0 0 0 0.48 1 High confidence GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM With other complex events 99 0.34 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 20 39590920 40334839 1 1 147 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 28.03 99.02 0 0 3 4 Whitelist GBM-US 0.62 0.63 NA NA 0.59 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 2 0.01 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 21 NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 22 NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::713190ed-c6c1-4695-814b-85ca9b95e6a0 X NA NA 0 0 147 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 713190ed-c6c1-4695-814b-85ca9b95e6a0 GBM 0.82 1.98 CNS-GBM NA 0 0 NA 3 GBM-US DO12454 TCGA-06-5415 713190ed-c6c1-4695-814b-85ca9b95e6a0 male alive C71.9 60 NA 260 NA Included CNS-GBM GBM US 0 8.55 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 1 209530581 249214157 103 103 173 26 30 24 23 0 0.77 0 51 0 0 51 51 51 55 51 51 17.32 2.99 96.99 16 2 1 Whitelist GBM-US 0.87 0 0 0 0.84 1 High confidence GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM Canonical without polyploidization 206 0.6 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 2 141656093 141833273 1 1 173 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 17.32 0.07 99.81 0 1 2 Whitelist GBM-US 0.62 0 NA NA 0.59 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 2 0.01 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 3 184986704 196927971 6 6 173 2 0 2 2 0 0.57 0.07 2 0 0 NA NA NA NA NA NA 17.32 6 93.97 0 1 2 Whitelist GBM-US 0.68 0.21 0 0 0.64 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 12 0.03 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 4 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 5 172168272 172442817 1 1 173 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 17.32 0.15 99.71 0 1 2 Whitelist GBM-US 0.62 0 NA NA 0.59 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 2 0.01 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 6 57729581 75383714 2 5 173 0 1 0 1 3 0.57 0.34 1 0 0 NA NA NA NA NA NA 17.32 0.03 99.82 0 2 NA Whitelist GBM-US 10 0.68 0.59 0 0 0.64 1 Linked to high confidence GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM With other complex events 7 0.02 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 7 55173044 55269129 2 2 173 0 0 1 1 0 0.57 0.03 1 0 0 NA NA NA 5 3 3 17.32 87.22 10.23 0 49 NA Whitelist GBM-US 0.68 0.1 0 0 0.64 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 4 0.01 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 8 2826868 145133759 1 3 173 2 1 0 0 0 0.3 0.04 5 0 0 5 3 5 5 3 3 17.32 0.18 99.81 0 2 1 Whitelist GBM-US 0.62 0.13 0 0 0.59 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 6 0.02 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 9 12172076 38138176 3 6 173 2 1 1 2 0 0.88 0.23 16 0 0 16 8 8 21 8 8 17.32 27.06 69.82 3 2 1 Whitelist GBM-US 0.93 0.47 0 0 0.91 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 12 0.03 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 10 71615252 125378628 8 12 173 2 3 1 2 4 0.8 0.02 14 0 0 14 14 14 16 16 16 17.32 61.04 38.78 0 1 2 Whitelist GBM-US 0.93 0.07 0 0 0.84 1 High confidence GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM Canonical without polyploidization 20 0.06 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 11 NA NA 0 0 173 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.21 NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 12 8669087 9519921 9 9 173 2 1 4 2 0 0.55 0.72 5 0 0 5 5 5 5 5 5 17.32 0.44 99.48 0 2 1 Whitelist GBM-US 0.68 0.9 0 0 0.64 1 Low confidence GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM Canonical without polyploidization 18 0.05 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 13 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 14 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 15 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 16 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 17 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 18 NA NA 0 0 173 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.26 NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 19 5717100 45101273 3 4 173 0 2 1 0 1 0.3 0.59 6 0 0 6 6 6 6 6 6 17.32 38.24 61.58 0 2 3 Whitelist GBM-US 0.54 0.81 0 0 0.59 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 7 0.02 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 20 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 21 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 22 28668506 28683481 1 1 173 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.32 44.12 55.88 0 1 NA Whitelist GBM-US 0.62 1 NA NA 0.59 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 2 0.01 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::737b35e1-d668-4fce-9b6e-76946c7952b6 X NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 737b35e1-d668-4fce-9b6e-76946c7952b6 GBM 0.93 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO10908 TCGA-27-2523 737b35e1-d668-4fce-9b6e-76946c7952b6 male deceased C71.9 63 489 NA NA Included CNS-GBM GBM US 1 16.09 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 1 6494595 10568924 4 13 291 1 2 1 0 9 0.57 0 6 0 0 6 4 6 14 4 7 78.02 92.15 7.85 0 2 5 Whitelist GBM-US 0.99 0 0 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 17 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 2 142067295 207063165 1 2 291 1 1 0 0 0 0.57 0 2 NA 0 NA NA NA 5 5 5 78.02 97.37 0 0 3 4 Whitelist GBM-US 0.68 0 NA 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 3 112952459 120730522 1 1 291 0 0 1 0 0 0.39 0.02 1 0 0 NA NA NA NA NA NA 78.02 99.97 0 0 4 NA Whitelist GBM-US 0.62 0.06 0 0 0.59 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 4 1163865 190815012 94 95 291 21 17 27 29 1 0.28 0 90 0 0 90 12 20 91 12 12 78.02 85.37 11.7 5 4 3 Whitelist GBM-US 0.62 0 0 0 0.59 1 High confidence GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM With other complex events 189 0.32 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 5 14975022 15022760 2 2 291 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 6 4 6 78.02 97.27 0.01 0 2 4 Whitelist GBM-US 0.68 0.08 0 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 6 97654318 156558877 1 4 291 2 0 0 0 2 0.11 0.01 2 0 0 NA NA NA NA NA NA 78.02 99.86 0 0 3 4 Whitelist GBM-US 0.54 0.03 0 0 0.48 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 6 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 7 56254568 69411496 1 2 291 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 5 3 3 78.02 97.45 0 0 5 6 Whitelist GBM-US 0.68 0.01 0 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 8 NA NA 0 0 291 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 9 21130542 26979040 17 35 291 4 3 6 4 18 0.77 0 21 0 0 21 5 9 46 5 7 78.02 69.63 27.26 2 0 2 Whitelist GBM-US 15 0.87 0 0 0 0.84 1 Low confidence GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM With other complex events 52 0.09 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 10 NA NA 0 0 291 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 11 NA NA 0 0 291 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA 11 10 11 0 0 0 0 0 0 Whitelist GBM-US NA 0.58 0 NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 12 117704000 117721226 1 1 291 0 0 0 1 0 0.39 0 1 0.01 NA NA NA NA NA NA NA 78.02 99.98 0 0 3 NA Whitelist GBM-US 0.62 0.01 0.01 NA 0.59 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 13 37734148 71010663 2 2 291 1 0 0 1 0 0.57 0.52 6 0 0 6 3 4 11 4 4 78.02 88.85 11.15 0 4 1 Whitelist GBM-US 0.68 0.76 0 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 14 86874568 92849540 1 2 291 0 0 1 1 0 0.57 0.04 1 NA 0 NA NA NA 4 3 3 78.02 96.29 0 0 3 NA Whitelist GBM-US 0.68 0.14 NA 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 15 34114739 74116044 17 35 291 5 7 3 2 18 0.32 0 19 0 0 19 8 11 24 10 11 78.02 71.02 28.88 2 2 3 Whitelist GBM-US 9 0.92 0 0 0 0.59 1 High confidence GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM With other complex events 52 0.09 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 16 89238539 89250870 1 1 291 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 78.02 99.91 0 0 3 NA Whitelist GBM-US 0.62 0.03 NA NA 0.59 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 17 NA NA 0 0 291 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA 9 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.81 0 NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 18 69222860 69754758 1 1 291 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 78.02 99.96 0 0 4 NA Whitelist GBM-US 0.62 0.11 NA NA 0.59 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 19 2873207 13907168 1 18 291 1 1 2 0 14 0.57 0 8 0 0 8 4 7 13 5 11 78.02 92.72 0 0 5 3 Whitelist GBM-US 0.87 0 0 0 0.64 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 22 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 20 12664308 57692669 1 2 291 0 0 2 0 0 0.11 0.23 2 0.1 0 NA NA NA NA NA NA 78.02 92.82 0 0 3 4 Whitelist GBM-US 0.54 0.46 0.1 0 0.48 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 21 NA NA 0 0 291 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 22 NA NA 0 0 291 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::74139255-a635-4c87-814d-3dd04ed630a8 X NA NA 0 0 291 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 74139255-a635-4c87-814d-3dd04ed630a8 GBM 0.38 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 GBM-US DO10975 TCGA-06-0190 74139255-a635-4c87-814d-3dd04ed630a8 male deceased C71.9 62 317 NA NA Included CNS-GBM GBM US 1 10.43 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 1 NA NA 0 0 131 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist GBM-US NA 0.08 0 NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 2 85961783 86524108 1 1 131 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 13.7 0.23 99.67 0 2 3 Whitelist GBM-US 0.62 0 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 3 2515461 3160126 12 12 131 2 3 4 3 0 0.88 0 7 0 0 7 7 7 11 7 7 13.7 0.75 99.11 2 2 1 Whitelist GBM-US 0.93 0 0 0 0.91 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 24 0.09 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 False positive; manually removed GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 4 19042389 100264269 1 2 131 0 0 1 1 0 0.57 0.73 1 0.06 0 NA NA NA NA NA NA 13.7 0.25 99.73 0 2 NA Whitelist GBM-US 0.68 0.9 0.06 0 0.64 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 5 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 6 163166998 164211386 7 7 131 2 3 1 1 0 0.67 0.01 3 0 0 NA NA NA 10 7 7 13.7 2.93 96.79 2 2 1 Whitelist GBM-US 0.77 0.04 0 0 0.74 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 14 0.05 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 7 125071609 135756379 2 2 131 0 0 1 1 0 0.57 0.56 1 0 0 NA NA NA 5 3 3 13.7 96 3.77 0 3 NA Whitelist GBM-US 0.68 0.79 0 0 0.64 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 8 136572764 136738805 1 1 131 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 13.7 0.11 99.88 0 1 2 Whitelist GBM-US 0.62 0.21 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 9 91951301 92730325 1 1 131 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 8 4 6 13.7 5.96 93.34 0 2 3 Whitelist GBM-US 0.62 0.2 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 10 NA NA 0 0 131 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.12 NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 11 94223994 125694299 1 5 131 1 0 1 1 2 0.8 0.21 4 0 0 4 3 4 7 3 3 13.7 6.53 93.04 0 2 1 Whitelist GBM-US 0.68 0.44 0 0 0.84 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 8 0.03 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 12 49845424 50519706 1 1 131 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 13.7 0.5 99.48 0 2 3 Whitelist GBM-US 0.62 0.26 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 13 62591280 93797596 2 2 131 0 1 0 1 0 0.57 0.09 2 0 0 NA NA NA NA NA NA 13.7 27.1 72.77 0 1 2 Whitelist GBM-US 0.68 0.26 0 0 0.64 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 14 98609565 99894680 36 36 131 10 9 10 7 0 0.88 0 10 0 0 10 10 10 15 11 11 13.7 9.36 89.73 2 1 2 Whitelist GBM-US 0.93 0 0 0 0.91 0 High confidence GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM Canonical without polyploidization 72 0.27 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 15 40220776 40337605 1 1 131 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 13.7 0.12 99.75 0 1 2 Whitelist GBM-US 0.62 0 0 NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 16 62263571 62897090 1 1 131 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.7 0.7 99.18 0 1 2 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 17 NA NA 0 0 131 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.94 NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 18 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 19 2733629 2766836 1 1 131 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 13.7 99.83 0 0 3 4 Whitelist GBM-US 0.62 0.76 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 20 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 21 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e 22 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 0 0 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::8da3103e-3e6c-4176-a583-d5fe5e60601e X 43002189 44414697 1 1 131 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 13.7 0.91 98.87 0 1 2 Whitelist GBM-US 0.62 0.07 NA NA 0.59 0 No GBM-US 8da3103e-3e6c-4176-a583-d5fe5e60601e GBM 0.59 2.03 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13510 TCGA-06-0125 8da3103e-3e6c-4176-a583-d5fe5e60601e female deceased C71.9 63 1448 NA NA Included CNS-GBM GBM US 1 47.63 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 1 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 2 141363246 234618081 1 4 175 4 0 0 0 0 0.01 0.01 6 0 0 6 6 6 7 7 7 31.97 0.28 99.62 0 1 2 Whitelist GBM-US 0.21 0.03 0 0 0.16 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 8 0.02 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 3 NA NA 0 0 175 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 4 128952549 128978898 2 2 175 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 31.97 0.16 99.82 0 2 NA Whitelist GBM-US 0.68 0.06 0 0 0.64 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 4 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 5 163700681 163767176 1 1 175 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 5 5 5 31.97 0.4 99.46 0 1 2 Whitelist GBM-US 0.62 0.36 0 NA 0.59 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 2 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 6 71789357 170660594 63 66 175 13 17 15 18 3 0.82 0 27 0 0 27 6 8 27 6 8 31.97 99.06 0.8 0 1 2 Whitelist GBM-US 12 0.85 0 0 0 0.86 1 Low confidence GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM With other complex events 129 0.37 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 7 111559563 117702968 1 2 175 1 1 0 0 0 0.57 0.01 3 NA 0 NA NA NA NA NA NA 31.97 99.52 0.26 0 3 2 Whitelist GBM-US 0.68 0.03 NA 0 0.64 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 4 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 8 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 9 8414628 127281207 1 2 175 1 1 0 0 0 0.57 0.07 2 NA 0.04 NA NA NA NA NA NA 31.97 0.14 99.72 0 1 2 Whitelist GBM-US 0.68 0.22 NA 0.04 0.64 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 4 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 10 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 11 6033888 105143674 18 18 175 5 7 3 3 0 0.49 0 39 0 0 39 15 39 40 15 15 31.97 48.72 50.85 0 2 1 Whitelist GBM-US 0.68 0 0 0 0.64 1 High confidence GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM With other complex events 36 0.1 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 12 44665062 82704891 47 52 175 12 12 13 10 5 0.94 0 12 0 0 12 6 6 15 7 7 31.97 30.4 65.85 0 1 2 Whitelist GBM-US 6 0.96 0 0 0 0.96 1 Low confidence GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM With other complex events 99 0.28 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 13 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 14 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 15 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 16 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 17 29361718 29439601 1 1 175 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 31.97 0 100 0 2 NA Whitelist GBM-US 0.62 0.26 NA NA 0.59 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 2 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 18 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 19 NA NA 0 0 175 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 20 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 21 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 22 NA NA 0 0 175 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 0 0 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 X 11781448 11805036 1 1 175 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 31.97 100 0 0 1 NA Whitelist GBM-US 0.62 0.06 NA NA 0.59 1 No GBM-US 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 GBM 0.92 1.83 CNS-GBM NA 2 0.01 NA 1 GBM-US DO12370 TCGA-19-5960 93ed7a2b-b0cb-4a84-871f-5c34a0b6a640 male alive C71.9 56 NA 165 NA Included CNS-GBM GBM US 0 5.43 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 4 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.09 NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 9 21335080 29327735 1 2 4 2 0 0 0 0 0.11 0.01 4 NA 0 4 3 4 5 3 3 83.02 5.66 93.64 0 1 0 Whitelist GBM-US 0.54 0.04 NA 0 0.48 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 4 0.5 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 11 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.05 NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::97686ab2-3b7e-4b21-9bf3-9a5a01709e04 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 GBM 0.86 3.14 CNS-GBM NA 0 0 NA 4 GBM-US DO11776 TCGA-06-1086 97686ab2-3b7e-4b21-9bf3-9a5a01709e04 male deceased C71.9 42 208 NA NA Included CNS-GBM GBM US 1 6.84 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 1 5166554 214663754 9 11 102 1 3 3 2 2 0.75 0.27 8 0 0 8 4 5 8 4 5 14.58 0.96 99.04 0 2 4 Whitelist GBM-US 0.87 0.51 0 0 0.83 0 Low confidence GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM With other complex events 20 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 2 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 3 57518066 63034204 1 1 102 0 0 0 1 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 14.58 0 99.97 0 2 NA Whitelist GBM-US 0.62 0.31 NA NA 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 4 NA NA 0 0 102 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.21 NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 5 159008247 159409872 1 1 102 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 14.58 0 97.31 0 2 NA Whitelist GBM-US 0.62 0.09 NA NA 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 6 38113945 155138914 1 3 102 1 2 0 0 0 0.3 0.53 5 0 0 5 5 5 5 5 5 14.58 1.69 98.17 0 2 3 Whitelist GBM-US 0.62 0.76 0 0 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 6 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 7 NA NA 0 0 102 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.15 NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 8 131078563 145033352 3 4 102 1 0 2 0 1 0.3 0.11 4 0 0 4 3 4 21 4 9 14.58 52.47 44.11 0 3 2 Whitelist GBM-US 0.68 0.28 0 0 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 7 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 9 21108839 33061064 1 1 102 1 0 0 0 0 0.39 0.3 6 0 0 6 4 4 10 4 4 14.58 31.83 68.02 0 2 1 Whitelist GBM-US 0.62 0.54 0 0 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 10 65055522 131592126 12 14 102 2 3 4 3 2 0.88 0 17 0 0 17 3 6 22 6 6 14.58 65.24 34.57 0 1 30 Whitelist GBM-US 0.98 0 0 0 0.91 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 26 0.13 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 11 13227647 13531340 1 1 102 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 14.58 9.78 89.79 0 2 NA Whitelist GBM-US 0.62 0.26 NA NA 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 12 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 13 97944702 101828928 1 1 102 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 14.58 0 85.85 0 2 NA Whitelist GBM-US 0.62 0.51 NA NA 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 14 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 15 NA NA 0 0 102 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.77 NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 16 NA NA 0 0 102 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 17 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 18 24385838 27487022 1 1 102 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 14.58 11.86 88.11 0 2 NA Whitelist GBM-US 0.62 0.76 NA NA 0.59 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 19 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 20 NA NA 0 0 102 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 21 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c 22 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a2ac9937-f351-4d78-9261-264bf6c21e0c X 143295957 152744697 44 44 102 9 13 8 14 0 0.5 0 1 0 0 NA NA NA NA NA NA 14.58 100 0 0 1 NA Whitelist GBM-US 0.68 0 0 0 0.64 0 No GBM-US a2ac9937-f351-4d78-9261-264bf6c21e0c GBM 0.75 1.94 CNS-GBM NA 88 0.43 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 GBM-US DO12352 TCGA-02-2483 a2ac9937-f351-4d78-9261-264bf6c21e0c male alive C71.9 43 NA 466 NA Included CNS-GBM GBM US 0 15.33 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 1 78780553 218110997 1 2 39 2 0 0 0 0 0.11 0.23 1 0 0 NA NA NA NA NA NA 44.18 100 0 0 3 NA Whitelist GBM-US 0.54 0.46 0 0 0.48 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 4 0.05 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 2 1402755 1700233 1 1 39 1 0 0 0 0 0.39 1 1 0.01 NA NA NA NA NA NA NA 44.18 99.9 0 0 3 NA Whitelist GBM-US 0.62 1 0.01 NA 0.59 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 2 0.03 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 3 23269218 115820970 1 2 39 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 44.18 0.13 99.82 0 2 1 Whitelist GBM-US 0.54 1 NA 0 0.48 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 4 0.05 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 4 171094209 171119571 1 1 39 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 7 7 7 44.18 0.4 99.5 0 1 2 Whitelist GBM-US 0.62 0.76 NA NA 0.59 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 2 0.03 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 5 163938618 164143030 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 44.18 99.76 0.11 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 2 0.03 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 6 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 7 48940586 81214070 5 5 39 2 2 0 1 0 0.53 0 16 0 0 16 3 4 30 3 3 44.18 97.11 0 0 9 10 Whitelist GBM-US 0.68 0 0 0 0.64 0 High confidence GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM Canonical without polyploidization 10 0.13 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 False negative; manually included GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 8 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 9 14951112 22214580 4 4 39 2 1 0 1 0 0.57 0.02 8 0 0 8 4 5 8 4 4 44.18 1.88 97.44 0 1 2 Whitelist GBM-US 0.68 0.07 0 0 0.64 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 8 0.1 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 10 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 11 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 12 27755620 85222697 1 2 39 0 1 1 0 0 0.57 0.7 3 NA 0 NA NA NA 5 0 3 44.18 99.87 0.04 0 2 3 Whitelist GBM-US 0.68 0.9 NA 0 0.64 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 4 0.05 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 15 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 16 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 17 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 0 0 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::a515cf2d-e918-4958-9bf6-e611b425a97e X 89722771 89737919 1 1 39 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 44.18 0 99.8 0 2 NA Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US a515cf2d-e918-4958-9bf6-e611b425a97e GBM 0.53 2.77 CNS-GBM NA 2 0.03 NA 4 GBM-US DO12070 TCGA-14-1823 a515cf2d-e918-4958-9bf6-e611b425a97e female deceased C71.9 58 543 NA NA Included CNS-GBM GBM US 1 17.86 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 1 154335098 206855923 1 3 87 0 2 0 0 1 0.11 0.32 3 0 0 NA NA NA 7 5 5 24.91 1.28 98.72 0 3 2 Whitelist GBM-US 6 0.62 0.57 0 0 0.48 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 5 0.03 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 2 66469477 174340940 8 8 87 1 1 2 4 0 0.39 0.01 9 0 0 9 5 9 13 5 5 24.91 0.54 99.37 0 2 1 Whitelist GBM-US 0.62 0.03 0 0 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 16 0.09 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 3 187019069 188224625 2 2 87 0 0 1 1 0 0.57 0.4 3 0 0 NA NA NA 7 5 5 24.91 0.71 99.15 0 2 1 Whitelist GBM-US 0.68 0.64 0 0 0.64 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 4 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 4 1487336 6610039 1 2 87 0 2 0 0 0 0.11 0.29 4 0.03 0 4 4 4 5 5 5 24.91 0.33 99.66 0 2 3 Whitelist GBM-US 0.54 0.53 0.03 0 0.48 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 4 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 5 36374584 36476938 1 1 87 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 24.91 0.06 99.8 0 2 3 Whitelist GBM-US 0.62 0.15 NA NA 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 2 0.01 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 6 44195742 108802817 1 2 87 0 2 0 0 0 0.11 1 4 0 0 4 4 4 9 9 9 24.91 0.79 99.06 0 2 3 Whitelist GBM-US 0.54 1 0 0 0.48 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 4 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 7 54829941 55233439 6 6 87 1 2 2 1 0 0.88 0 3 0 0 NA NA NA 12 3 3 24.91 99.73 0.03 3 3 49 Whitelist GBM-US 0.93 0 0 0 0.91 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 12 0.07 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 8 NA NA 0 0 87 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.33 NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 9 16567978 28843259 3 3 87 2 1 0 0 0 0.3 0.09 8 0 0 8 5 8 13 6 6 24.91 8.19 91.13 0 1 2 Whitelist GBM-US 0.62 0.24 0 0 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 6 0.03 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 10 92542951 114255604 2 5 87 0 0 1 1 3 0.57 0.06 4 0 0 4 4 4 8 7 7 24.91 98.94 0.91 0 1 2 Whitelist GBM-US 0.93 0.19 0 0 0.64 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 7 0.04 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 11 94245664 94501556 1 2 87 1 1 0 0 0 0.57 0.13 3 0 0 NA NA NA 5 5 5 24.91 0.35 99.09 0 2 3 Whitelist GBM-US 0.68 0.32 0 0 0.64 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 4 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 12 21311605 57374579 1 2 87 1 1 0 0 0 0.57 0.44 4 NA 0 4 3 4 5 3 3 24.91 99.5 0.42 0 3 2 Whitelist GBM-US 0.68 0.69 NA 0 0.64 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 4 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 13 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 14 56702675 77523351 1 3 87 0 2 0 0 1 0.11 0.2 5 0 0 5 5 5 7 5 5 24.91 22.33 76.75 0 2 3 Whitelist GBM-US 0.62 0.42 0 0 0.48 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 5 0.03 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 15 94273630 94764485 1 1 87 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 24.91 0.48 99.52 0 2 3 Whitelist GBM-US 0.62 0.91 NA NA 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 2 0.01 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 16 NA NA 0 0 87 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 17 73730466 74137214 1 2 87 0 1 0 0 1 0.39 0.09 3 0 NA NA NA NA 9 4 4 24.91 1.3 98.69 0 2 3 Whitelist GBM-US 0.68 0.24 0 NA 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 3 0.02 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 18 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 19 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 20 33903113 34203079 1 1 87 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 3 5 24.91 99.01 0 0 3 5 Whitelist GBM-US 0.62 0.69 NA NA 0.59 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 2 0.01 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 21 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 22 NA NA 0 0 87 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.24 NA NA NA 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 0 0 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b1c4579c-72fa-4974-830c-b6a81ace45f4 X 145906161 148505931 3 3 87 0 1 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 24.91 99.64 0.13 0 3 NA Whitelist GBM-US 0.87 1 0 0 0.84 0 No GBM-US b1c4579c-72fa-4974-830c-b6a81ace45f4 GBM 0.79 2.14 CNS-GBM NA 6 0.03 NA 3 GBM-US DO11202 TCGA-14-2554 b1c4579c-72fa-4974-830c-b6a81ace45f4 female deceased C71.9 52 532 NA NA Included CNS-GBM GBM US 1 17.5 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 1 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 2 37382685 37451464 1 3 130 1 0 0 0 2 0.39 0.01 1 NA 0 NA NA NA NA NA NA 7.62 0 99.91 0 2 NA Whitelist GBM-US X 0.87 0.03 NA 0 0.59 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 3 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 4 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 5 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 6 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 7 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 8 49237204 51101001 1 9 130 1 0 0 1 7 0.57 0.04 5 0 0 5 5 5 7 7 7 7.62 25.94 73.72 0 2 1 Whitelist GBM-US 15 0.97 0.15 0 0 0.64 1 Linked to high confidence GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM Canonical without polyploidization 11 0.04 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 9 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 10 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 11 62150588 134825280 1 3 130 1 1 0 0 1 0.57 0.29 4 NA 0 4 4 4 6 6 6 7.62 37.97 61.88 0 1 2 Whitelist GBM-US 0.87 0.54 NA 0 0.64 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 5 0.02 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 12 57781868 59706359 81 82 130 22 14 23 22 1 0.46 0 29 0 0 29 4 5 34 4 5 7.62 15.62 84.29 2 18 19 Whitelist GBM-US 0.64 0 0 0 0.64 1 Low confidence GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM With other complex events 163 0.63 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 13 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 14 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 15 71116986 102044792 10 25 130 3 4 1 2 15 0.57 0 7 0 0 7 7 7 8 8 8 7.62 18.93 80.98 0 3 2 Whitelist GBM-US 0.74 0 0 0 0.64 1 High confidence GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM Canonical without polyploidization 35 0.13 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 16 NA NA 0 0 130 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.81 NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 17 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 18 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 19 NA NA 0 0 130 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.91 NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 20 NA NA 0 0 130 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 21 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 22 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::b37d944c-c65c-46d6-bb8b-3eb37cb85b68 X 70334273 87509185 8 10 130 2 4 1 1 2 0.39 0 12 0 0 12 9 12 18 13 13 7.62 66.33 30.31 9 2 1 Whitelist GBM-US 0.62 0.02 0 0 0.59 1 High confidence GBM-US b37d944c-c65c-46d6-bb8b-3eb37cb85b68 GBM 0.89 1.95 CNS-GBM Canonical without polyploidization 18 0.07 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 GBM-US DO13575 TCGA-06-2570 b37d944c-c65c-46d6-bb8b-3eb37cb85b68 female alive C71.9 21 NA 285 NA Included CNS-GBM GBM US 0 9.38 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 1 7820380 205321858 1 8 93 1 1 0 0 6 0.57 0.7 5 0.05 0.01 5 3 5 5 3 3 15.37 0.84 99.16 0 2 1 Whitelist GBM-US 0.68 0.9 0.05 0.01 0.64 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 10 0.05 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 2 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 3 185902585 186250670 2 2 93 0 0 1 1 0 0.57 0.22 2 NA 0 NA NA NA 4 4 4 15.37 6.02 93.86 0 1 2 Whitelist GBM-US 0.68 0.45 NA 0 0.64 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 4 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 5 2466702 4173254 2 2 93 0 1 0 1 0 0.57 0.29 3 0.02 0 NA NA NA 7 7 7 15.37 0.5 99.36 0 2 1 Whitelist GBM-US 0.68 0.53 0.02 0 0.64 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 6 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 7 25442783 152694109 60 63 93 13 16 15 16 3 0.94 0 39 0 0 39 4 5 43 4 5 15.37 35.41 62.03 0 4 2 Whitelist GBM-US 0.96 0 0 0 0.96 0 Low confidence GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM With other complex events 123 0.66 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 8 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 9 21124696 22605064 3 3 93 2 1 0 0 0 0.3 0.42 4 0 0 4 3 4 7 4 4 15.37 9.9 89.42 0 1 0 Whitelist GBM-US 0.62 0.67 0 0 0.59 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 6 0.03 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 10 NA NA 0 0 93 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.69 NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 11 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 12 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 13 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 14 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 15 NA NA 0 0 93 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.02 0 NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 16 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 17 NA NA 0 0 93 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.91 NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 18 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 19 39005001 53989095 2 2 93 0 0 1 1 0 0.57 0.71 3 NA 0 NA NA NA NA NA NA 15.37 74.34 25.17 0 3 2 Whitelist GBM-US 0.68 0.9 NA 0 0.64 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 4 0.02 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 20 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 21 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 22 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::be3a7ef3-34ed-40e1-9d9c-187940596b26 X NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US be3a7ef3-34ed-40e1-9d9c-187940596b26 GBM 0.71 1.97 CNS-GBM NA 0 0 NA 2 GBM-US DO11782 TCGA-27-2528 be3a7ef3-34ed-40e1-9d9c-187940596b26 male deceased C71.9 62 480 NA NA Included CNS-GBM GBM US 1 15.79 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 1 236448580 247025772 1 5 338 1 0 0 1 3 0.57 0 1 0 0 NA NA NA 11 11 11 10.87 0.18 99.82 4 2 NA Whitelist GBM-US 3_6 0.93 0 0 0 0.64 1 Linked to high confidence GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM With other complex events 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 2 49553920 141436209 1 4 338 2 0 0 0 2 0.11 0 1 0 0 NA NA NA NA NA NA 10.87 0 99.89 20 2 NA Whitelist GBM-US 0.68 0 0 0 0.48 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 3 9360075 163964348 1 13 338 5 2 0 1 5 0.07 0.52 9 0 0 9 5 9 9 5 5 10.87 7.74 92.21 18 2 1 Whitelist GBM-US 0.62 0.76 0 0 0.48 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 21 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 4 164603096 164652756 2 2 338 0 0 1 1 0 0.57 0.19 1 0 0 NA NA NA NA NA NA 10.87 0.03 99.96 1 2 NA Whitelist GBM-US 0.68 0.41 0 0 0.64 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 5 NA NA 0 0 338 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.02 0 NA NA 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 6 155280936 168158297 136 186 338 32 34 35 35 50 0.98 0 89 0 0 89 42 43 94 42 48 10.87 3.84 96.01 5 1 2 Whitelist GBM-US 1 0 0 0 0.99 1 High confidence GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM With other complex events 322 0.48 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 7 16533917 100901571 19 19 338 3 7 4 5 0 0.61 0.23 36 0 0 36 6 6 38 7 7 10.87 7.73 89.43 18 2 3 Whitelist GBM-US 0.72 0.46 0 0 0.68 1 Low confidence GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM With other complex events 38 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 8 59278957 59337931 1 1 338 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 10.87 0.04 99.95 0 2 3 Whitelist GBM-US 0.62 0 NA NA 0.59 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 2 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 9 21939171 139950330 1 6 338 1 1 0 0 4 0.57 0.05 7 0 0 7 5 5 8 5 5 10.87 26.56 73.3 16 2 4 Whitelist GBM-US 0.54 0.16 0 0 0.64 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 8 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 10 NA NA 0 0 338 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 11 80581858 82139342 1 2 338 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 10.87 0 99.57 0 2 NA Whitelist GBM-US 0.54 0 NA 0 0.48 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 12 68044420 118562550 6 6 338 1 1 2 2 0 0.88 0.9 1 0 0 NA NA NA NA NA NA 10.87 0.05 99.87 12 2 NA Whitelist GBM-US 0.93 1 0 0 0.91 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 12 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 13 NA NA 0 0 338 0 0 0 0 0 NA 0.1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.27 0 NA NA 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 14 74246880 91730852 1 4 338 0 2 0 0 2 0.11 0.35 6 0 0 6 6 6 7 7 7 10.87 0.35 98.74 0 2 3 Whitelist GBM-US 0.54 0.6 0 0 0.48 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 15 73020684 76122770 1 6 338 0 2 0 0 4 0.11 0.32 6 0 0 6 6 6 7 7 7 10.87 0.18 99.82 0 2 3 Whitelist GBM-US 3 0.68 0.57 0 0 0.48 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 8 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 16 11311055 11425283 1 1 338 0 1 0 0 0 0.39 0.23 2 0.51 NA NA NA NA 4 3 3 10.87 0.89 99.02 0 2 3 Whitelist GBM-US 0.62 0.47 0.51 NA 0.59 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 2 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 17 42942495 79155865 3 3 338 1 0 1 1 0 0.8 0.87 5 0 0 5 3 5 10 5 5 10.87 8.56 90.83 4 2 1 Whitelist GBM-US 0.87 1 0 0 0.84 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 18 61202200 61400325 3 3 338 2 1 0 0 0 0.3 0.18 3 0 0 NA NA NA 9 9 9 10.87 1.38 98.59 0 2 1 Whitelist GBM-US 0.62 0.39 0 0 0.59 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 19 49260461 50024281 2 6 338 0 0 1 1 4 0.57 0.01 4 0 0 4 0 3 17 13 13 10.87 28.5 71.11 0 2 3 Whitelist GBM-US 14 0.93 0.04 0 0 0.64 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 8 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 20 5090284 40046377 1 9 338 1 1 0 1 6 0.8 0.45 5 0 0 5 5 5 5 5 5 10.87 99.01 0 6 3 4 Whitelist GBM-US 0.68 0.7 0 0 0.84 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 12 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 21 NA NA 0 0 338 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.33 NA NA NA 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e 22 NA NA 0 0 338 0 0 0 0 0 NA 0.61 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist GBM-US NA 0.82 0 NA NA 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::bf339349-062f-4ea9-a0b2-d87d3a21099e X 27358116 119076495 5 7 338 0 1 2 2 2 0.53 0.53 1 0 0 NA NA NA NA NA NA 10.87 0.03 99.74 10 2 NA Whitelist GBM-US 0.62 0.76 0 0 0.64 1 No GBM-US bf339349-062f-4ea9-a0b2-d87d3a21099e GBM 0.83 1.97 CNS-GBM NA 12 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7576911_A_G;17_7577141_T_C,CN:2 2 GBM-US DO11854 TCGA-14-1402 bf339349-062f-4ea9-a0b2-d87d3a21099e female deceased C71.9 58 975 NA NA Included CNS-GBM GBM US 1 32.07 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 1 71545400 72426398 1 1 263 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 28.99 42.22 57.78 0 1 2 Whitelist GBM-US 0.62 0 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 2 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 2 134970667 135011871 1 2 263 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 5 5 5 28.99 0.02 99.89 0 1 2 Whitelist GBM-US 0.54 0 0 0 0.48 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 4 0.01 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 3 85530110 85698163 1 1 263 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 28.99 0 99.97 0 2 NA Whitelist GBM-US 0.62 0 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 2 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 4 NA NA 0 0 263 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0 0 NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 5 NA NA 0 0 263 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 6 163868527 163967372 1 1 263 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 28.99 0 99.86 0 2 NA Whitelist GBM-US 0.62 0 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 2 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 7 NA NA 0 0 263 0 0 0 0 0 NA 0.34 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.59 0 NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 8 89110111 89647717 1 1 263 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 28.99 21.9 78 0 1 2 Whitelist GBM-US 0.62 0.01 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 2 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 9 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 10 17581032 31961746 1 2 263 0 1 0 0 1 0.39 0 2 NA NA NA NA NA NA NA NA 28.99 81.71 18.11 0 1 2 Whitelist GBM-US 0.68 0.01 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 3 0.01 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 11 NA NA 0 0 263 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 12 57802243 59971140 194 207 263 47 49 49 49 13 1 0 48 0 0 48 3 5 57 3 5 28.99 27.14 72.77 34 24 26 Whitelist GBM-US 0.97 0 0 0 1 0 High confidence GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM Canonical without polyploidization 401 0.76 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 False negative; manually included GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 13 60976131 61015877 1 1 263 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 28.99 0.03 99.97 0 1 2 Whitelist GBM-US 0.62 0.25 NA NA 0.59 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 2 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 14 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 15 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 16 11082483 11804564 9 9 263 2 3 2 2 0 0.95 0.25 5 0 0 5 5 5 9 6 6 28.99 35.86 63.8 0 2 1 Whitelist GBM-US 0.97 0.49 0 0 0.97 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 18 0.03 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 17 14287624 19579447 3 3 263 1 1 1 0 0 0.8 0.34 3 0 0 NA NA NA 7 7 7 28.99 20.8 74.75 0 1 2 Whitelist GBM-US 0.87 0.59 0 0 0.84 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 6 0.01 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 18 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 19 37357148 57417680 2 2 263 0 0 1 1 0 0.57 0.82 3 0 0 NA NA NA 4 3 3 28.99 90.77 9.06 0 2 1 Whitelist GBM-US 0.68 0.96 0 0 0.64 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 4 0.01 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 20 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 21 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 22 NA NA 0 0 263 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 0 0 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c184c3ca-7ad3-4202-b108-cb9fd5f5d947 X 104993906 127749880 1 2 263 2 0 0 0 0 0.11 0.02 4 0 0 4 3 4 5 3 3 28.99 99.76 0.01 0 3 2 Whitelist GBM-US 0.54 0.07 0 0 0.48 0 No GBM-US c184c3ca-7ad3-4202-b108-cb9fd5f5d947 GBM 0.91 2.1 CNS-GBM NA 4 0.01 NA 2 GBM-US DO11501 TCGA-41-5651 c184c3ca-7ad3-4202-b108-cb9fd5f5d947 female alive C71.9 59 NA 351 NA Included CNS-GBM GBM US 0 11.55 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 1 NA NA 0 0 241 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 2 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 3 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 4 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 5 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 6 43602359 48828217 16 106 241 5 6 2 3 90 0.48 0 26 0 0 26 4 4 29 4 4 94.8 98.1 1.75 1 2 49 Whitelist GBM-US 0.75 0 0 0 0.64 0 Low confidence GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM With other complex events 122 0.25 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 7 NA NA 0 0 241 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 8 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 9 NA NA 0 0 241 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 10 89409027 91261848 11 11 241 4 3 2 2 0 0.8 0.76 4 0 0 4 0 3 4 0 3 94.8 99.45 0.41 0 3 0 Whitelist GBM-US 0.87 0.92 0 0 0.84 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 22 0.05 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 11 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 12 57367262 69519356 79 181 241 16 20 24 19 102 0.65 0 46 0 0 46 4 5 51 4 4 94.8 92.98 6.94 1 2 49 Whitelist GBM-US 1 0 0 0 0.72 0 Low confidence GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM With other complex events 260 0.54 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 13 28081281 49564951 2 2 241 0 1 1 0 0 0.57 0.07 3 0 0 NA NA NA 5 3 5 94.8 100 0 3 4 5 Whitelist GBM-US 0.68 0.21 0 0 0.64 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 4 0.01 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 14 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 15 33012799 59794626 1 3 241 3 0 0 0 0 0.03 0.17 6 0 0 6 4 6 7 5 7 94.8 84.09 15.78 0 4 2 Whitelist GBM-US 0.41 0.39 0 0 0.33 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 6 0.01 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 16 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 17 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 18 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 19 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 20 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 21 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab 22 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab X NA NA 0 0 241 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0 NA NA NA 0 No GBM-US c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab GBM 0.7 4.05 CNS-GBM NA 0 0 NA 49 GBM-US DO13348 TCGA-06-0686 c931f3bd-74c5-4ebd-bc0f-c7c6becd25ab male alive C71.9 53 NA 286 NA Included CNS-GBM GBM US 0 9.41 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 1 11417252 204857656 1 3 105 0 1 1 0 1 0.57 0.58 3 0.11 0.06 NA NA NA NA NA NA 86.23 100 0 0 4 12 Whitelist GBM-US 0.87 0.81 0.11 0.06 0.64 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 5 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 2 4931914 5944046 6 8 105 2 1 1 2 2 0.88 0.16 6 0 0 6 6 6 11 11 11 86.23 99.91 0 0 4 5 Whitelist GBM-US 1 0.36 0 0 0.91 0 Low confidence GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM After polyploidization 14 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 3 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 4 54660832 64870856 8 8 105 2 2 1 3 0 0.8 0.69 7 0 0 7 4 7 7 4 7 86.23 99.99 0 1 4 9 Whitelist GBM-US 0.87 0.89 0 0 0.84 0 Low confidence GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM With other complex events 16 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 5 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 6 NA NA 0 0 105 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.26 NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 7 43019383 45110155 10 10 105 4 3 1 2 0 0.57 0 13 0 0 13 7 7 18 9 10 86.23 99.78 0 0 4 6 Whitelist GBM-US 0.68 0 0 0 0.64 0 High confidence GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM With other complex events 20 0.1 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 8 68506883 72724157 11 11 105 4 5 1 1 0 0.2 0 7 0 0 7 7 7 9 9 9 86.23 98.37 1.62 0 4 2 Whitelist GBM-US 0.62 0 0 0 0.59 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 22 0.1 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 False positive; manually removed GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 9 20894328 33306157 3 3 105 0 1 1 1 0 0.8 1 2 0 0 NA NA NA 5 5 5 86.23 1.67 97.66 0 0 2 Whitelist GBM-US 0.87 1 0 0 0.84 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 6 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 10 22087569 23087839 1 1 105 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 86.23 0.74 99.15 0 0 2 Whitelist GBM-US 0.62 0.26 NA NA 0.59 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 11 33586163 33605201 2 2 105 0 0 1 1 0 0.57 0.64 1 0 0 NA NA NA NA NA NA 86.23 99.44 0 0 4 NA Whitelist GBM-US 0.68 0.85 0 0 0.64 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 12 NA NA 0 0 105 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.49 NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 13 103381839 113602059 3 5 105 3 0 0 0 2 0.03 0 12 0 0 12 4 6 13 4 7 86.23 94.88 5.12 0 2 4 Whitelist GBM-US 2 0.62 0 0 0 0.33 0 Linked to low confidence GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM With other complex events 8 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 14 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 15 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 16 85956549 89924266 19 19 105 7 2 5 5 0 0.44 0 11 0 0 11 8 11 11 8 11 86.23 99.43 0 0 1 3 Whitelist GBM-US 0.68 0 0 0 0.64 0 High confidence GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM Canonical without polyploidization 38 0.18 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 17 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 18 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 19 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 20 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 21 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 22 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::de7b7cac-f094-4d59-8651-e991e34ea093 X 29319771 32630840 1 2 105 2 0 0 0 0 0.11 0.18 3 NA 0 NA NA NA NA NA NA 86.23 99.77 0 0 4 3 Whitelist GBM-US 0.54 0.4 NA 0 0.48 0 No GBM-US de7b7cac-f094-4d59-8651-e991e34ea093 GBM 0.56 3.59 CNS-GBM NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:4 3 GBM-US DO13869 TCGA-06-0210 de7b7cac-f094-4d59-8651-e991e34ea093 female deceased C71.9 72 225 NA NA Included CNS-GBM GBM US 1 7.4 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 1 NA NA 0 0 65 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist GBM-US NA 0.01 0 NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 2 9628427 220024259 3 3 65 1 2 0 0 0 0.3 0.5 5 0 0 5 3 4 6 3 3 72.15 99.88 0 0 5 2 Whitelist GBM-US 0.62 0.74 0 0 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 6 0.05 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 3 59537357 59686704 1 1 65 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 4 4 4 72.15 99.86 0 0 4 5 Whitelist GBM-US 0.62 0.84 NA NA 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 2 0.02 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 4 NA NA 0 0 65 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.32 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 5 NA NA 0 0 65 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist GBM-US NA 1 0 NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 6 162084782 162273005 1 2 65 0 0 1 0 1 0.39 1 3 NA NA NA NA NA 7 4 7 72.15 31.53 68.24 0 1 2 Whitelist GBM-US 0.68 1 NA NA 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 3 0.02 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 7 NA NA 0 0 65 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.51 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 8 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 9 108779986 109055948 1 1 65 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 6 4 4 72.15 85.72 13.57 0 3 4 Whitelist GBM-US 0.62 0.76 NA NA 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 2 0.02 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 10 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.62 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 11 35540691 134611751 1 4 65 2 0 0 1 1 0.3 0.55 6 0 0 6 5 6 6 5 5 72.15 99.69 0 1 4 3 Whitelist GBM-US 0.68 0.77 0 0 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 7 0.05 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 12 51821337 88808438 16 27 65 4 4 4 4 11 1 0 20 0 0 20 7 19 23 7 8 72.15 99.98 0 6 4 5 Whitelist GBM-US 0.96 0 0 0 1 1 High confidence GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM With other complex events 43 0.33 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 13 NA NA 0 0 65 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.9 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 14 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 15 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 16 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 17 28157337 76376664 1 2 65 1 1 0 0 0 0.57 0.7 3 NA 0 NA NA NA 5 3 3 72.15 84.81 10.74 0 4 6 Whitelist GBM-US 0.68 0.89 NA 0 0.64 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 4 0.03 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 18 NA NA 0 0 65 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.89 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 19 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 20 2088597 34412816 1 8 65 2 1 1 2 2 0.88 0 9 0 0 9 4 6 10 5 7 72.15 99.03 0 3 3 4 Whitelist GBM-US 1 0 0 0 0.91 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 14 0.11 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 21 NA NA 0 0 65 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.78 NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f 22 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 0 0 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::e17a6048-7a72-42c0-ad3f-97cbff02bc9f X 30072767 30134002 1 1 65 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 72.15 0.04 99.96 0 1 2 Whitelist GBM-US 0.62 0.51 NA NA 0.59 1 No GBM-US e17a6048-7a72-42c0-ad3f-97cbff02bc9f GBM 0.61 3.36 CNS-GBM NA 2 0.02 NA 4 GBM-US DO11046 TCGA-19-2629 e17a6048-7a72-42c0-ad3f-97cbff02bc9f male deceased C71.9 60 737 NA NA Included CNS-GBM GBM US 1 24.24 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 1 204083125 204291811 2 6 39 0 1 1 0 4 0.57 0 5 0 0 5 0 3 13 0 0 14.61 0.32 99.68 0 49 108 Whitelist GBM-US 12 0.68 0 0 0 0.64 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 8 0.1 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 2 152901470 153332871 1 1 39 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 14.61 0.18 99.71 0 2 3 Whitelist GBM-US 0.62 0.5 NA NA 0.59 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 2 0.03 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 3 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 4 139307230 140196689 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 14.61 0.76 99.02 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 2 0.03 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 5 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 6 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 7 2206395 141574002 1 9 39 0 2 0 0 7 0.11 0 8 0 0 8 3 3 9 3 3 14.61 99.77 0 0 3 4 Whitelist GBM-US 0.85 0 0 0 0.48 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 11 0.14 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 8 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 9 6092691 6958612 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.61 0.61 99.24 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 2 0.03 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 10 60570332 61245710 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.61 99.31 0.5 0 1 2 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 2 0.03 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 11 35602635 36353860 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.61 0.56 98.9 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 2 0.03 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 12 3258573 58713011 1 14 39 1 2 1 0 10 0.57 0 13 0 0 13 5 5 14 5 5 14.61 2.51 97.41 0 2 3 Whitelist GBM-US 0.81 0 0 0 0.64 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 18 0.23 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 13 NA NA 0 0 39 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist GBM-US NA 0.64 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 16 NA NA 0 0 39 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist GBM-US NA 0.24 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 17 NA NA 0 0 39 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.53 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 19 4874795 37034091 1 4 39 0 2 0 0 2 0.11 0.01 7 0.45 0 7 5 7 9 7 7 14.61 85.61 14.22 0 3 2 Whitelist GBM-US 0.68 0.04 0.45 0 0.48 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 6 0.08 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 20 NA NA 0 0 39 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.43 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 22 NA NA 0 0 39 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.62 NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::ea3b5da2-6a12-400c-bf0f-e442f5ec1132 X NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US ea3b5da2-6a12-400c-bf0f-e442f5ec1132 GBM 0.84 2.08 CNS-GBM NA 0 0 NA 2 GBM-US DO12814 TCGA-06-0157 ea3b5da2-6a12-400c-bf0f-e442f5ec1132 female deceased C71.9 63 97 NA NA Included CNS-GBM GBM US 1 3.19 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 1 201526160 202260319 1 1 119 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 14.05 0.56 99.44 0 2 3 Whitelist GBM-US 0.62 0.1 NA NA 0.59 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 2 NA NA 0 0 119 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.02 NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 3 89927982 90171339 3 3 119 0 1 1 1 0 0.8 0.15 1 0 0 NA NA NA NA NA NA 14.05 0 99.95 0 2 NA Whitelist GBM-US 0.87 0.35 0 0 0.84 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 6 0.03 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 4 153735391 154493730 1 2 119 0 1 0 0 1 0.39 0.2 2 NA NA NA NA NA NA NA NA 14.05 0.4 99.59 0 2 3 Whitelist GBM-US 0.54 0.42 NA NA 0.59 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 3 0.01 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 5 142693416 143133577 9 9 119 2 3 2 2 0 0.95 0.57 1 0 0 NA NA NA NA NA NA 14.05 0 99.88 0 2 NA Whitelist GBM-US 0.97 0.79 0 0 0.97 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 18 0.08 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 6 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 7 54787740 55365940 19 19 119 5 6 4 4 0 0.9 0 2 0 0 NA NA NA 7 3 3 14.05 99.05 0.88 9 4 49 Whitelist GBM-US 0.93 0 0 0 0.92 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 38 0.16 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 8 578939 1909805 3 6 119 1 1 2 2 0 0.88 0.21 2 0 0 NA NA NA 6 6 6 14.05 0.77 99.22 0 1 2 Whitelist GBM-US 0.93 0.44 0 0 0.91 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 12 0.05 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 9 19934041 27288375 48 48 119 12 11 13 12 0 0.98 0 25 0 0 25 23 25 27 23 23 14.05 5.67 94.19 0 1 0 Whitelist GBM-US 0.99 0 0 0 0.99 1 High confidence GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM Canonical without polyploidization 96 0.4 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 10 65581301 131307328 1 2 119 0 0 0 1 1 0.39 0.38 3 NA 0 NA NA NA 4 4 4 14.05 83.43 16.38 0 2 1 Whitelist GBM-US 0.68 0.63 NA 0 0.59 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 3 0.01 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 11 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 12 NA NA 0 0 119 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 0.16 NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 13 40508993 41664645 5 5 119 1 1 1 2 0 0.9 0.01 1 0 0 NA NA NA NA NA NA 14.05 0 100 0 2 NA Whitelist GBM-US 0.93 0.04 0 0 0.92 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 10 0.04 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 14 NA NA 0 0 119 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 15 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 16 85022959 85702018 1 1 119 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 14.05 1.39 98.52 0 2 3 Whitelist GBM-US 0.62 1 NA NA 0.59 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 2 0.01 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 17 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 18 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 19 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 20 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 21 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f 22 37642871 38332937 1 2 119 0 2 0 0 0 0.11 0.65 4 NA 0 4 3 4 5 3 3 14.05 1.35 98.65 0 3 2 Whitelist GBM-US 0.54 0.86 NA 0 0.48 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 4 0.02 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::f45f4a30-6b4c-4f15-9140-959d6a25a45f X NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 1 No GBM-US f45f4a30-6b4c-4f15-9140-959d6a25a45f GBM 0.7 2 CNS-GBM NA 0 0 NA 2 GBM-US DO13132 TCGA-27-1831 f45f4a30-6b4c-4f15-9140-959d6a25a45f male deceased C71.9 66 505 NA NA Included CNS-GBM GBM US 1 16.61 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 2 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA 1 NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 4 52897350 67372179 1 2 32 0 1 1 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 16.95 1.43 98.56 0 2 7 Whitelist GBM-US 0.68 1 NA 0 0.64 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 4 0.06 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 6 156882194 164039874 3 3 32 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 16.95 4.18 95.67 0 1 2 Whitelist GBM-US 0.87 0.01 0 0 0.84 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 6 0.09 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 7 53082077 104552299 1 6 32 1 5 0 0 0 0.01 0.01 10 0 0 10 3 7 11 3 3 16.95 95.37 1.83 0 2 3 Whitelist GBM-US 0.25 0.03 0 0 0.19 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 12 0.19 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 8 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 9 19678126 24073536 1 9 32 3 0 0 1 5 0.11 0 7 0 0 7 3 4 9 4 6 16.95 8.85 91 1 1 2 Whitelist GBM-US 0.85 0 0 0 0.48 0 High confidence GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM Canonical without polyploidization 13 0.2 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 False negative; manually included GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 11 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 12 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 14 21708959 75840827 1 6 32 1 0 0 0 5 0.39 0 3 0 0 NA NA NA NA NA NA 16.95 7.29 76.8 0 2 1 Whitelist GBM-US 0.93 0 0 0 0.59 0 High confidence GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM Canonical without polyploidization 7 0.11 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 False negative; manually included GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 16 80077392 80105843 1 2 32 0 0 1 1 0 0.57 0.21 1 NA 0 NA NA NA NA NA NA 16.95 0 99.89 0 2 NA Whitelist GBM-US 0.68 0.44 NA 0 0.64 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 4 0.06 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 17 73519170 73531020 1 1 32 0 1 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 16.95 0 99.95 0 2 NA Whitelist GBM-US 0.62 0.81 NA NA 0.59 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 2 0.03 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 GBM-US::fa1f1cfc-9da0-488b-93fe-60aaff99c171 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist GBM-US NA NA NA NA NA 0 No GBM-US fa1f1cfc-9da0-488b-93fe-60aaff99c171 GBM 0.78 1.95 CNS-GBM NA 0 0 NA 2 GBM-US DO11292 TCGA-06-0155 fa1f1cfc-9da0-488b-93fe-60aaff99c171 male deceased C71.9 61 318 NA NA Included CNS-GBM GBM US 1 10.46 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 1 98474430 246490820 1 4 143 4 0 0 0 0 0.01 0.02 3 0 0 NA NA NA NA NA NA 70.1 99.95 0.05 0 3 2 Whitelist HNSC-US 0.21 0.08 0 0 0.16 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 2 187393850 187534691 2 2 143 2 0 0 0 0 0.11 0.05 3 0 0 NA NA NA 28 19 19 70.1 85.44 11.88 0 3 2 Whitelist HNSC-US 0.54 0.16 0 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 3 174619016 174910033 2 4 143 2 0 1 1 0 0.57 0.07 6 0 0 6 3 4 23 11 11 70.1 69.54 30.32 0 2 3 Whitelist HNSC-US 0.68 0.2 0 0 0.64 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 4 24549182 35452009 4 6 143 0 1 1 2 2 0.57 0 18 0 0 18 3 5 33 3 5 70.1 99.7 0.12 0 5 16 Whitelist HNSC-US 0.62 0 0 0 0.64 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 5 58901651 94356275 1 3 143 3 0 0 0 0 0.03 0.12 3 0 0 NA NA NA 5 3 3 70.1 25.55 71.77 0 2 1 Whitelist HNSC-US 0.41 0.3 0 0 0.33 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 6 26177390 102191459 2 6 143 4 0 1 1 0 0.11 0.38 13 0 0 13 5 11 16 5 5 70.1 99.44 0.41 0 2 3 Whitelist HNSC-US 0.54 0.63 0 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 12 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 7 110310112 110788656 1 2 143 2 0 0 0 0 0.11 0.09 2 0 0 NA NA NA 5 3 3 70.1 99.78 0 0 3 4 Whitelist HNSC-US 0.54 0.25 0 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 8 37919068 38083176 3 3 143 1 1 0 1 0 0.8 0.85 3 0 0 NA NA NA 10 3 5 70.1 96.47 0 0 7 6 Whitelist HNSC-US 0.87 0.98 0 0 0.84 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 9 8824120 109254864 1 8 143 3 0 0 2 3 0.14 0 20 0 0 20 4 4 25 5 7 70.1 87.22 12.1 0 3 2 Whitelist HNSC-US 0.68 0 0 0 0.59 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 13 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 10 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 11 63032946 83467753 2 2 143 0 2 0 0 0 0.11 0.69 5 0 0 5 5 5 10 5 5 70.1 62.95 36.62 0 4 5 Whitelist HNSC-US 0.54 0.89 0 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 12 18682589 19125558 1 1 143 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 70.1 0.62 99.29 0 2 NA Whitelist HNSC-US 0.62 0.38 NA NA 0.59 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 13 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 14 43853450 67883157 1 3 143 1 2 0 0 0 0.3 0.63 1 0 0 NA NA NA NA NA NA 70.1 99.09 0 0 5 NA Whitelist HNSC-US 0.62 0.84 0 0 0.59 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 15 NA NA 0 0 143 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.42 NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 16 72290534 83201473 1 5 143 4 1 0 0 0 0.04 0.29 10 0 0 10 10 10 11 11 11 70.1 99.57 0.34 0 2 3 Whitelist HNSC-US 0.45 0.53 0 0 0.36 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 10 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 17 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 18 64215906 64241765 1 1 143 0 1 0 0 0 0.39 0.29 1 0 NA NA NA NA 7 3 3 70.1 23.83 71.25 0 2 NA Whitelist HNSC-US 0.62 0.53 0 NA 0.59 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 19 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 20 8755622 15217616 1 3 143 2 1 0 0 0 0.3 1 6 0 0 6 5 6 7 5 5 70.1 99.02 0 0 4 3 Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 21 NA NA 0 0 143 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 22 28528590 28922789 1 2 143 2 0 0 0 0 0.11 0.69 4 NA 0 4 3 4 5 3 3 70.1 100 0 0 4 3 Whitelist HNSC-US 0.54 0.89 NA 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::05fbd98c-28bd-41bc-ae60-16ac0c16c723 X 28782142 29191351 2 2 143 2 0 0 0 0 0.11 0 1 0 0 NA NA NA 13 11 11 70.1 1.36 98.64 0 1 NA Whitelist HNSC-US 0.54 0.01 0 0 0.48 0 No HNSC-US 05fbd98c-28bd-41bc-ae60-16ac0c16c723 HNSC 0.39 3.17 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577120_T_C;17_7577124_A_C,CN:3 2 HNSC-US DO14238 TCGA-CV-7090 05fbd98c-28bd-41bc-ae60-16ac0c16c723 male alive C14.8 39 NA 3837 NA Included Head-SCC HNSC US 0 126.22 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 1 65944883 66022731 2 2 130 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 14 7 7 38.73 50.53 49.46 0 2 NA Whitelist HNSC-US 0.68 0.01 0 0 0.64 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 2 82302533 82316153 1 1 130 1 0 0 0 0 0.39 0.27 1 0 NA NA NA NA NA NA NA 38.73 72.27 27.64 0 1 NA Whitelist HNSC-US 0.62 0.51 0 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 3 1788580 185639821 1 6 130 2 2 0 1 1 0.53 0.17 10 0 0 10 3 6 11 3 3 38.73 19.64 80.18 69 2 3 Whitelist HNSC-US 0.62 0.38 0 0 0.64 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 11 0.04 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 4 34568879 87563566 1 3 130 2 1 0 0 0 0.3 0.11 3 0 0 NA NA NA NA NA NA 38.73 95.38 4.13 4 1 2 Whitelist HNSC-US 0.62 0.29 0 0 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 6 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 5 72736193 138623769 2 2 130 0 0 1 1 0 0.57 0.47 4 0 0 4 4 4 5 5 5 38.73 0.14 99.71 24 2 3 Whitelist HNSC-US 0.68 0.71 0 0 0.64 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 6 66402969 68550169 1 2 130 2 0 0 0 0 0.11 0.71 5 0 0 5 4 5 13 8 8 38.73 19.75 77.41 0 1 2 Whitelist HNSC-US 0.54 0.9 0 0 0.48 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 7 26224610 26242316 1 1 130 1 0 0 0 0 0.39 0.85 1 0 NA NA NA NA NA NA NA 38.73 0 99.78 3 2 NA Whitelist HNSC-US 0.62 0.98 0 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 8 112006308 112127464 1 1 130 0 1 0 0 0 0.39 0.69 2 0 NA NA NA NA NA NA NA 38.73 0.08 99.91 3 2 3 Whitelist HNSC-US 0.62 0.89 0 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 9 112088977 112108114 1 1 130 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 4 4 4 38.73 78.9 17.98 0 1 NA Whitelist HNSC-US 0.62 1 0 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 10 129224670 129807521 2 2 130 0 0 1 1 0 0.57 0.29 4 0 0 4 3 4 5 3 3 38.73 0.17 99.66 7 2 1 Whitelist HNSC-US 0.68 0.54 0 0 0.64 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 11 86215645 128430689 3 3 130 1 0 1 1 0 0.8 0.01 5 0 0 5 5 5 9 5 5 38.73 46.99 52.58 5 2 1 Whitelist HNSC-US 0.87 0.05 0 0 0.84 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 6 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 12 NA NA 0 0 130 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 0 NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 13 73644393 74310802 1 2 130 0 2 0 0 0 0.11 1 4 0 0 4 3 4 5 3 3 38.73 99.65 0.35 0 2 1 Whitelist HNSC-US 0.54 1 0 0 0.48 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 14 NA NA 0 0 130 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.42 NA NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 15 NA NA 0 0 130 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.81 NA NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 16 9416697 83853690 1 6 130 0 1 2 0 3 0.3 0 3 0 0 NA NA NA 4 3 3 38.73 42.28 57.63 30 1 2 Whitelist HNSC-US 0.54 0.02 0 0 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 9 0.03 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 17 NA NA 0 0 130 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 18 40547511 40644564 1 1 130 1 0 0 0 0 0.39 0.4 2 0 NA NA NA NA NA NA NA 38.73 0.12 99.84 1 1 2 Whitelist HNSC-US 0.62 0.65 0 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 19 NA NA 0 0 130 0 0 0 0 0 NA 0.33 NA 0.13 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.58 0.13 NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 20 11241836 11326587 1 1 130 0 1 0 0 0 0.39 0.37 2 0.11 NA NA NA NA 5 5 5 38.73 0.15 98.86 0 2 3 Whitelist HNSC-US 0.62 0.62 0.11 NA 0.59 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 21 18092340 38697969 1 2 130 0 2 0 0 0 0.11 0.21 4 0 0 4 4 4 5 5 5 38.73 0.67 76.68 4 2 3 Whitelist HNSC-US 0.54 0.44 0 0 0.48 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 4 0.02 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a 22 NA NA 0 0 130 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.87 NA NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::0956bc67-dd55-4c54-a56a-f22f2856662a X NA NA 0 0 130 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.46 0 NA NA 0 No HNSC-US 0956bc67-dd55-4c54-a56a-f22f2856662a HNSC 0.75 1.71 Head-SCC NA 0 0 NA 2 HNSC-US DO15870 TCGA-CR-6472 0956bc67-dd55-4c54-a56a-f22f2856662a male alive C01 59 NA 1050 NA Included Head-SCC HNSC US 0 34.54 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 1 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 2 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 3 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 4 108754184 145224981 1 6 43 2 0 1 0 3 0.3 0.07 6 0 0 6 6 6 6 6 6 13.79 24.14 75.84 0 1 2 Whitelist HNSC-US 0.54 0.2 0 0 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 9 0.1 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 5 NA NA 0 0 43 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 6 727050 11072941 3 3 43 2 0 0 1 0 0.3 0.01 2 0.58 0 NA NA NA 6 6 6 13.79 20.99 78.87 0 1 2 Whitelist HNSC-US 0.62 0.06 0.58 0 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 6 0.07 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 7 NA NA 0 0 43 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 8 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 9 5368683 5474600 4 6 43 1 1 1 1 2 1 0 4 0 0 4 0 3 7 3 3 13.79 4.55 94.75 0 2 5 Whitelist HNSC-US 4 0.68 0 0 0 1 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 10 0.12 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 11 90066818 133865024 1 3 43 1 0 0 0 2 0.39 0.45 2 NA 0 NA NA NA NA NA NA 13.79 32.44 67.13 0 1 2 Whitelist HNSC-US 0.87 0.7 NA 0 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 4 0.05 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 14 103336300 103618089 1 1 43 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 4 3 3 13.79 21.21 77.88 0 0 1 Whitelist HNSC-US 0.62 0.64 NA NA 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 16 11025204 57093154 1 2 43 2 0 0 0 0 0.11 0.32 5 NA 0 5 3 5 6 4 4 13.79 57.33 37.7 0 1 0 Whitelist HNSC-US 0.54 0.57 NA 0 0.48 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 4 0.05 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 17 NA NA 0 0 43 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.58 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 18 NA NA 0 0 43 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.1 NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 19 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 20 20966450 34066453 4 6 43 0 2 1 1 2 0.57 0 11 0 0 11 0 3 15 3 3 13.79 8.62 83.7 0 2 3 Whitelist HNSC-US 0.93 0 0 0 0.64 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 10 0.12 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 21 15288711 37966662 1 3 43 0 1 0 2 0 0.3 0.02 7 0 0 7 4 7 8 5 5 13.79 55.42 21.93 0 2 3 Whitelist HNSC-US 0.62 0.07 0 0 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 6 0.07 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::180036a2-3b56-405e-a1fe-d5932517b6c7 X 154943069 154997295 1 1 43 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.79 99.82 0 0 1 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 180036a2-3b56-405e-a1fe-d5932517b6c7 HNSC 0.58 1.86 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15911 TCGA-CV-5443 180036a2-3b56-405e-a1fe-d5932517b6c7 male alive C32.9 63 NA 2567 NA Included Head-SCC HNSC US 0 84.44 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 1 214261886 239475463 1 2 72 2 0 0 0 0 0.11 0.83 4 0 0 4 3 4 10 3 5 70.24 71.76 25.26 0 3 0 Whitelist HNSC-US 0.54 0.97 0 0 0.48 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 4 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 2 21542568 99115052 1 3 72 0 1 1 0 1 0.57 0.2 7 0 0 7 0 3 9 3 3 70.24 97.03 0 0 3 11 Whitelist HNSC-US 0.87 0.42 0 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 5 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 3 61696718 86830663 1 3 72 2 0 0 0 1 0.11 0.82 5 0 0 5 3 5 8 4 4 70.24 55.13 41.71 0 1 0 Whitelist HNSC-US 0.62 0.96 0 0 0.48 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 5 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 4 47350249 85804975 1 3 72 1 0 0 0 2 0.39 0.15 4 0 0 4 4 4 8 6 6 70.24 41.01 56.62 0 2 4 Whitelist HNSC-US 0.87 0.35 0 0 0.59 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 4 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 5 2793912 3228102 2 2 72 0 0 1 1 0 0.57 0.46 2 0.03 0 NA NA NA 10 3 4 70.24 25.71 71.65 0 2 4 Whitelist HNSC-US 0.68 0.7 0.03 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 4 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 6 77139393 79341691 2 2 72 0 0 1 1 0 0.57 0.33 1 NA 0 NA NA NA NA NA NA 70.24 99.45 0.4 0 3 NA Whitelist HNSC-US 0.68 0.58 NA 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 4 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 7 52104225 52982833 4 4 72 1 1 1 1 0 1 0.11 3 0 0 NA NA NA 9 6 6 70.24 36.49 60.78 0 5 4 Whitelist HNSC-US 1 0.29 0 0 1 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 8 0.06 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 8 NA NA 0 0 72 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.52 NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 9 10075176 10148889 1 1 72 1 0 0 0 0 0.39 0.76 2 0 NA NA NA NA 10 3 3 70.24 74.46 24.85 0 1 2 Whitelist HNSC-US 0.62 0.93 0 NA 0.59 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 10 91701615 92281681 4 4 72 0 1 1 2 0 0.57 0.39 3 0 0 NA NA NA 4 4 4 70.24 68.26 28.39 0 3 2 Whitelist HNSC-US 0.68 0.63 0 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 8 0.06 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 11 59538511 128185883 1 4 72 3 0 0 0 1 0.03 0.58 5 0 0 5 3 5 6 4 4 70.24 99.42 0.02 0 3 2 Whitelist HNSC-US 0.21 0.8 0 0 0.33 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 7 0.05 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 12 6666822 6764198 1 1 72 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 70.24 99.92 0 0 4 NA Whitelist HNSC-US 0.62 0.51 NA NA 0.59 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 13 82595486 99108721 2 3 72 1 0 0 1 1 0.57 0.1 1 0 0 NA NA NA 4 0 0 70.24 87.42 12.58 0 5 NA Whitelist HNSC-US 0.87 0.27 0 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 5 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 15 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 16 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 17 7532114 7795539 1 1 72 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 8 0 3 70.24 85.58 9.28 0 1 3 Whitelist HNSC-US 0.62 0.15 0 NA 0.59 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 18 65599917 66669025 3 3 72 2 1 0 0 0 0.3 0.01 3 0 0 NA NA NA 6 3 4 70.24 25.72 69.64 0 2 1 Whitelist HNSC-US 0.62 0.06 0 0 0.59 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 6 0.04 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 19 9708882 21630398 1 3 72 2 0 0 0 1 0.11 0.01 5 0 0 5 0 3 8 0 0 70.24 40.74 59.08 0 2 5 Whitelist HNSC-US 0.62 0.06 0 0 0.48 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 5 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 20 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 21 16424176 20734271 1 2 72 1 1 0 0 0 0.57 0.22 5 NA 0 5 0 3 10 4 4 70.24 46.77 30.58 0 2 4 Whitelist HNSC-US 0.68 0.45 NA 0 0.64 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 4 0.03 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af 22 NA NA 0 0 72 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.8 NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::1f744ada-6de1-446d-b62c-76a7fc8b40af X NA NA 0 0 72 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist HNSC-US NA 0.81 NA NA NA 0 No HNSC-US 1f744ada-6de1-446d-b62c-76a7fc8b40af HNSC 0.47 3.24 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578427_A_T,CN:1 4 HNSC-US DO15110 TCGA-CN-4737 1f744ada-6de1-446d-b62c-76a7fc8b40af male alive C02.9 19 NA 240 NA Included Head-SCC HNSC US 0 7.89 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 1 111840592 111941549 4 4 45 1 0 2 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 45.03 100 0 0 3 NA Whitelist HNSC-US 0.68 0.09 0 0 0.64 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 8 0.09 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 2 189550190 237548213 4 4 45 1 0 2 1 0 0.57 0.05 10 0 0 10 10 10 11 11 11 45.03 2.61 97.3 6 1 2 Whitelist HNSC-US 0.68 0.17 0 0 0.64 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 8 0.09 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 3 60340730 60541105 1 1 45 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 45.03 99.76 0.1 3 2 3 Whitelist HNSC-US 0.62 0.05 0 NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 4 162120148 188200636 5 6 45 1 0 2 2 1 0.53 0.03 4 0 0 4 4 4 7 5 5 45.03 3.81 96.17 4 1 2 Whitelist HNSC-US 0.62 0.11 0 0 0.64 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 11 0.12 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 5 NA NA 0 0 45 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 6 NA NA 0 0 45 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 7 151901153 153388331 1 1 45 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 45.03 98.84 0.93 7 2 3 Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 8 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 9 NA NA 0 0 45 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.89 NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 10 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 11 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 12 NA NA 0 0 45 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.71 NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 13 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 14 52570292 103401958 1 2 45 2 0 0 0 0 0.11 0.17 4 NA 0 4 4 4 5 5 5 45.03 14.43 84.66 3 1 2 Whitelist HNSC-US 0.54 0.38 NA 0 0.48 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 4 0.04 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 16 NA NA 0 0 45 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.59 NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 17 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 18 12082 82427 1 1 45 0 1 0 0 0 0.39 0.12 2 0 NA NA NA NA NA NA NA 45.03 0.09 99.89 0 2 3 Whitelist HNSC-US 0.62 0.3 0 NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 19 9094878 9334798 1 1 45 0 1 0 0 0 0.39 0.06 2 0.24 NA NA NA NA NA NA NA 45.03 99.56 0 1 3 7 Whitelist HNSC-US 0.62 0.18 0.25 NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 20 15034420 15581904 1 1 45 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 45.03 98.75 0.87 0 2 3 Whitelist HNSC-US 0.62 0.84 NA NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 0 0 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3c975b68-4a6e-4c97-a8d1-b9a427d4957c X 72349568 72479388 1 1 45 0 0 1 0 0 0.39 0.29 2 0 NA NA NA NA 5 3 3 45.03 99.77 0 1 3 4 Whitelist HNSC-US 0.62 0.53 0 NA 0.59 0 No HNSC-US 3c975b68-4a6e-4c97-a8d1-b9a427d4957c HNSC 0.85 2.5 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14678 TCGA-CV-5442 3c975b68-4a6e-4c97-a8d1-b9a427d4957c female alive C05.0 76 NA 2327 NA Included Head-SCC HNSC US 0 76.55 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 1 237066888 237539353 2 3 362 1 1 0 0 1 0.57 0.01 1 0 0 NA NA NA 28 4 7 73.82 99.94 0.06 0 4 NA Whitelist HNSC-US 2 0.62 0.06 0 0 0.64 1 Linked to low confidence HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC With other complex events 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 2 164623105 179954501 30 52 362 6 10 6 8 22 0.69 0 56 0 0 56 5 15 102 5 7 73.82 97.03 0.28 9 4 6 Whitelist HNSC-US 17 0.68 0 0 0 0.77 1 Low confidence HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC With other complex events 82 0.11 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 3 980214 174918572 1 25 362 15 4 1 0 5 0 0.47 33 0 0 33 9 17 33 9 10 73.82 53.86 42.99 5 3 2 Whitelist HNSC-US 0.02 0.71 0 0 0 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 45 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 4 17276274 182542010 1 14 362 9 3 0 0 2 0 0.75 38 0 0 38 15 22 40 15 15 73.82 73.83 23.63 3 3 4 Whitelist HNSC-US 0.13 0.92 0 0 0.03 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 26 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 5 42823466 129917634 1 20 362 5 5 1 1 8 0.15 0.59 24 0 0 24 4 13 26 4 4 73.82 72.16 25.16 3 3 2 Whitelist HNSC-US 2 0.62 0.81 0 0 0.59 1 Linked to low confidence HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC With other complex events 32 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 6 124788253 124992945 3 3 362 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 15 7 7 73.82 99.54 0.31 0 3 4 Whitelist HNSC-US 0.87 0.01 0 0 0.84 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 7 46513922 57877590 6 20 362 2 1 2 1 14 0.88 0 42 0 0 42 3 4 81 5 5 73.82 99.02 0.76 1 6 4 Whitelist HNSC-US 18 0.77 0 0 0 0.91 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 26 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 8 135476569 135526830 2 2 362 2 0 0 0 0 0.11 0.47 3 0 0 NA NA NA 19 6 7 73.82 66.81 29.45 1 4 3 Whitelist HNSC-US 0.54 0.72 0 0 0.48 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 9 33572911 38070542 4 4 362 0 2 1 1 0 0.57 0.18 15 0 0 15 3 5 36 7 10 73.82 73.4 25.94 2 3 2 Whitelist HNSC-US 0.68 0.39 0 0 0.64 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 10 69325372 69426313 2 2 362 0 1 1 0 0 0.57 0.03 2 0 0 NA NA NA 14 4 7 73.82 72.39 27.43 0 3 4 Whitelist HNSC-US 0.68 0.12 0 0 0.64 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 11 31037993 36019692 11 20 362 3 6 1 1 9 0.11 0 29 0 0 29 3 3 71 3 4 73.82 17.28 79.23 5 3 5 Whitelist HNSC-US 0.66 0 0 0 0.48 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 31 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 12 44422419 44451969 1 1 362 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 8 3 4 73.82 71.46 24.8 0 3 NA Whitelist HNSC-US 0.62 0 0 NA 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 13 20435185 74834105 1 6 362 1 2 0 2 1 0.53 0.77 9 0 0 9 3 5 10 4 4 73.82 64.33 35.67 0 3 1 Whitelist HNSC-US 0.93 0.93 0 0 0.64 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 11 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 14 68283381 71529179 1 2 362 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 27 4 7 73.82 83.52 0.57 0 2 4 Whitelist HNSC-US 0.54 1 0 0 0.48 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 15 25686192 95602947 1 3 362 2 1 0 0 0 0.3 0.15 3 0 0 NA NA NA 5 4 5 73.82 77.25 17.97 0 3 2 Whitelist HNSC-US 0.62 0.34 0 0 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 16 63590524 63658122 1 1 362 1 0 0 0 0 0.39 0.07 2 0 NA NA NA NA NA NA NA 73.82 99.82 0.07 0 2 3 Whitelist HNSC-US 0.62 0.21 0 NA 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 17 37011270 62375856 4 21 362 1 1 1 1 17 1 0 21 0 0 21 21 21 29 22 24 73.82 84.26 10.87 3 4 3 Whitelist HNSC-US 2 0.66 0 0 0 1 1 High confidence HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC After polyploidization 25 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 18 3708220 54685996 1 9 362 2 0 3 1 3 0.34 0.62 20 0 0 20 9 14 25 9 9 73.82 39.12 55.85 0 3 2 Whitelist HNSC-US 0.68 0.84 0 0 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 15 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 19 24217360 48283784 1 4 362 1 2 1 0 0 0.57 0.57 6 0 0 6 5 6 7 5 5 73.82 99.77 0.06 0 3 4 Whitelist HNSC-US 0.68 0.79 0 0 0.64 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 20 8764052 9027572 1 1 362 0 1 0 0 0 0.39 0.1 2 0.4 NA NA NA NA NA NA NA 73.82 99.03 0 0 4 5 Whitelist HNSC-US 0.62 0.26 0.4 NA 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 21 22779789 22958462 1 1 362 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 73.82 77.35 0 0 3 4 Whitelist HNSC-US 0.62 0.59 NA NA 0.59 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca 22 NA NA 0 0 362 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.34 NA NA NA 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::3e5f451a-5882-4914-ae1a-95c898c2bcca X 26599463 148427347 1 7 362 4 0 1 1 1 0.11 0 11 0 0 11 6 8 12 6 8 73.82 41.23 55.62 2 1 2 Whitelist HNSC-US 0.62 0.02 0 0 0.48 1 No HNSC-US 3e5f451a-5882-4914-ae1a-95c898c2bcca HNSC 0.58 3.09 Head-SCC NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 3 HNSC-US DO14236 TCGA-BA-6872 3e5f451a-5882-4914-ae1a-95c898c2bcca male deceased C04.9 47 384 NA NA Included Head-SCC HNSC US 1 12.63 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 1 27829316 192460819 1 2 107 0 2 0 0 0 0.11 0.15 3 0.12 0.03 NA NA NA 4 3 4 28.18 0.09 96.95 110 2 3 Whitelist HNSC-US 0.54 0.35 0.12 0.03 0.48 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 4 0.02 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 2 5725349 7890677 2 2 107 0 0 1 1 0 0.57 0.73 1 0 0 NA NA NA 4 4 4 28.18 0.06 99.83 1 2 NA Whitelist HNSC-US 0.68 0.9 0 0 0.64 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 4 0.02 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 3 16632977 54379842 2 7 107 1 0 0 1 5 0.57 0 13 0 0 13 13 13 23 15 15 28.18 96.42 0.42 10 2 1 Whitelist HNSC-US 0.96 0 0 0 0.64 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 9 0.04 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 4 164355389 164684892 1 1 107 0 1 0 0 0 0.39 0.12 1 0 NA NA NA NA NA NA NA 28.18 20.55 79.24 0 2 NA Whitelist HNSC-US 0.62 0.31 0 NA 0.59 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 5 171597970 171618026 2 2 107 1 1 0 0 0 0.57 0.32 3 0 0 NA NA NA 9 5 5 28.18 27.02 70.3 30 2 1 Whitelist HNSC-US 0.68 0.57 0 0 0.64 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 4 0.02 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 6 NA NA 0 0 107 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.26 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 7 11736285 101732125 1 5 107 0 0 1 0 4 0.39 0.08 6 0 0 6 4 6 7 4 4 28.18 43.46 56.29 62 2 1 Whitelist HNSC-US 3 0.68 0.23 0 0 0.59 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 6 0.03 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 8 3165356 48727229 1 3 107 3 0 0 0 0 0.03 0.27 3 0 0 NA NA NA 5 3 3 28.18 0.27 99.28 14 2 1 Whitelist HNSC-US 0.41 0.51 0 0 0.33 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 6 0.03 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 9 NA NA 0 0 107 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.21 0 NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 10 NA NA 0 0 107 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.74 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 11 12798532 85998789 1 3 107 1 1 0 0 1 0.57 0.82 6 0.13 0 6 3 4 7 4 5 28.18 42.52 57.06 56 1 3 Whitelist HNSC-US 0.62 0.96 0.13 0 0.64 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 5 0.02 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 12 80099069 80156025 1 1 107 0 1 0 0 0 0.39 0.49 1 0 NA NA NA NA NA NA NA 28.18 0 99.92 0 2 NA Whitelist HNSC-US 0.62 0.74 0 NA 0.59 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 13 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 14 NA NA 0 0 107 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.8 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 15 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 16 82676127 82734026 1 1 107 0 1 0 0 0 0.39 0.54 2 0 NA NA NA NA NA NA NA 28.18 0.06 99.89 0 2 3 Whitelist HNSC-US 0.62 0.77 0 NA 0.59 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 17 NA NA 0 0 107 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.93 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 18 NA NA 0 0 107 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.63 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 19 NA NA 0 0 107 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.03 0 NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 20 41969611 42177803 1 1 107 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 28.18 0.33 98.7 0 1 2 Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 21 40036371 44624584 1 3 107 0 3 0 0 0 0.03 0.14 5 0 0 5 3 3 8 3 4 28.18 51.13 26.23 0 2 1 Whitelist HNSC-US 0.41 0.34 0 0 0.33 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 6 0.03 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 22 NA NA 0 0 107 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.33 NA NA NA 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 0 0 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::4075717b-2240-4842-a00a-0c4dbcb910c4 X 126031677 126119210 2 2 107 0 2 0 0 0 0.11 0.26 3 0 0 NA NA NA 6 4 4 28.18 99.62 0.03 0 1 2 Whitelist HNSC-US 0.54 0.5 0 0 0.48 0 No HNSC-US 4075717b-2240-4842-a00a-0c4dbcb910c4 HNSC 0.52 1.85 Head-SCC NA 4 0.02 NA 2 HNSC-US DO14566 TCGA-CV-6961 4075717b-2240-4842-a00a-0c4dbcb910c4 male deceased C02.9 61 76 NA NA Included Head-SCC HNSC US 1 2.5 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 2 157121999 157197647 1 1 7 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 25.92 0.03 99.88 0 2 49 Whitelist HNSC-US 0.62 0.7 NA NA 0.59 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 2 0.14 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 3 87654148 90143892 1 1 7 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA 4 4 4 25.92 43.76 53.07 0 1 2 Whitelist HNSC-US 0.62 0.64 NA NA 0.59 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 2 0.14 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 5 NA NA 0 0 7 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.62 NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 8 143007876 144418102 1 1 7 0 1 0 0 0 0.39 0.31 2 NA NA NA NA NA 4 3 3 25.92 99.99 0 0 8 11 Whitelist HNSC-US 0.62 0.55 NA NA 0.59 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 2 0.14 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 11 627803 31144180 1 1 7 0 0 0 1 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 25.92 35.17 64.39 0 2 NA Whitelist HNSC-US 0.62 0.53 NA NA 0.59 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 2 0.14 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 12 NA NA 0 0 7 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.53 NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 15 60522854 60534446 1 1 7 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 25.92 0 99.87 0 2 NA Whitelist HNSC-US 0.62 0.4 NA NA 0.59 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 2 0.14 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::468649e7-1525-4b8a-8ab5-ddb27db5f022 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 468649e7-1525-4b8a-8ab5-ddb27db5f022 HNSC 0.38 2.11 Head-SCC NA 0 0 NA 2 HNSC-US DO15943 TCGA-CR-6482 468649e7-1525-4b8a-8ab5-ddb27db5f022 male alive C09.9 62 NA 345 NA Included Head-SCC HNSC US 0 11.35 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 1 NA NA 0 0 167 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.14 0 NA NA 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 2 43377376 161142744 1 11 167 4 2 0 0 5 0.06 0.26 11 0 0 11 5 7 12 6 8 25.05 4.79 95.09 0 2 1 Whitelist HNSC-US 0.54 0.51 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 17 0.05 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 3 159560833 189561449 1 2 167 0 2 0 0 0 0.11 0.05 4 0 0 4 3 4 6 3 3 25.05 71.61 25.24 0 4 3 Whitelist HNSC-US 0.54 0.16 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 4 13653036 150544139 1 6 167 4 2 0 0 0 0.06 0.44 10 0 0 10 7 10 11 7 7 25.05 0.09 99.7 2 2 3 Whitelist HNSC-US 0.54 0.69 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 12 0.04 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 5 44206571 132730154 1 3 167 3 0 0 0 0 0.03 0.34 3 0 0 NA NA NA NA NA NA 25.05 0.09 99.9 0 2 1 Whitelist HNSC-US 0.41 0.59 0 0 0.33 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 6 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 6 3148031 163023923 1 7 167 2 4 1 0 0 0.17 0.87 13 0 0 13 3 9 14 3 4 25.05 1.39 98.47 0 2 1 Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 14 0.04 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 7 16790717 19151534 4 4 167 0 1 1 2 0 0.57 0 1 0 0 NA NA NA 11 3 3 25.05 39.39 60.39 0 3 NA Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 8 2950895 107659582 1 5 167 3 1 0 0 1 0.11 0.48 5 0 0 5 0 4 6 3 3 25.05 65.06 34.83 0 0 1 Whitelist HNSC-US 0.62 0.73 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 9 0.03 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 9 8989468 22024982 2 4 167 2 0 1 1 0 0.57 0 7 0 0 7 5 6 19 8 8 25.05 6.11 93.19 0 0 2 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 10 16547968 71917017 1 4 167 2 2 0 0 0 0.26 0.85 6 0 0 6 4 6 7 5 5 25.05 0.1 99.72 4 2 1 Whitelist HNSC-US 0.62 0.99 0 0 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 11 NA NA 0 0 167 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.99 0 NA NA 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 12 54744261 62846243 1 2 167 0 2 0 0 0 0.11 0.71 1 0 0 NA NA NA 4 3 3 25.05 19.53 80.39 0 2 NA Whitelist HNSC-US 0.54 0.9 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 13 37574971 99158309 1 2 167 2 0 0 0 0 0.11 0.67 6 0 0 6 4 6 7 5 5 25.05 13.18 86.82 1 2 1 Whitelist HNSC-US 0.54 0.87 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 14 35863015 107255298 1 3 167 0 2 0 0 1 0.11 0.82 3 0 0 NA NA NA NA NA NA 25.05 41.17 58.75 0 1 2 Whitelist HNSC-US 0.62 0.96 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 5 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 15 30104137 44708080 1 5 167 4 0 0 0 1 0.01 0.47 9 0 0 9 6 9 11 6 6 25.05 60.43 34.68 0 3 2 Whitelist HNSC-US 0.1 0.72 0 0 0.16 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 9 0.03 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 16 89574650 89594928 1 1 167 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 25.05 0 99.16 0 2 NA Whitelist HNSC-US 0.62 0.34 NA NA 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 17 2500185 70567737 1 7 167 2 4 0 1 0 0.17 0 5 0 0 5 5 5 5 5 5 25.05 0.05 99.95 0 2 3 Whitelist HNSC-US 0.62 0.01 0 0 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 14 0.04 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 18 18552157 52735336 1 2 167 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 25.05 0 99.96 0 2 NA Whitelist HNSC-US 0.54 1 0 0 0.48 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 19 23075927 52534605 1 2 167 1 0 0 1 0 0.57 0.02 1 0 0 NA NA NA 6 4 4 25.05 23.99 75.84 0 2 NA Whitelist HNSC-US 0.68 0.08 0 0 0.64 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 20 19265861 19298310 1 1 167 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA 4 3 3 25.05 2.32 96.74 0 1 2 Whitelist HNSC-US 0.62 0.52 NA NA 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 21 9840020 34258319 1 3 167 3 0 0 0 0 0.03 0.02 9 0 0 9 3 4 11 3 4 25.05 59.66 17.69 2 2 3 Whitelist HNSC-US 0.41 0.07 0 0 0.33 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 6 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 22 NA NA 0 0 167 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::4cffea0b-90a7-4c86-a73f-bb8feca3ada7 X 67422733 69498366 7 7 167 2 0 4 1 0 0.17 0.07 1 0 0 NA NA NA NA NA NA 25.05 99.57 0 0 1 NA Whitelist HNSC-US 0.62 0.21 0 0 0.59 0 No HNSC-US 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 HNSC 0.56 1.89 Head-SCC NA 14 0.04 nonsynonymous_SNV,17_7578271_A_T,CN:2 2 HNSC-US DO15022 TCGA-CN-5365 4cffea0b-90a7-4c86-a73f-bb8feca3ada7 male deceased C09.9 38 351 NA NA Included Head-SCC HNSC US 1 11.55 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 1 39368998 156995129 2 3 167 0 1 0 1 1 0.57 0.67 1 0 0 NA NA NA 4 3 3 78.4 100 0 0 4 NA Whitelist HNSC-US 0.62 0.87 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 5 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 2 32852178 62128483 3 5 167 0 2 1 0 2 0.3 0.58 1 0 0 NA NA NA 13 7 7 78.4 82.96 16.94 0 2 NA Whitelist HNSC-US 0.62 0.8 0 0 0.59 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 8 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 3 31737341 136673854 1 3 167 3 0 0 0 0 0.03 0.05 6 0 0 6 4 5 7 4 4 78.4 52.55 44.3 0 3 4 Whitelist HNSC-US 0.41 0.16 0 0 0.33 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 4 29463604 160985498 1 3 167 3 0 0 0 0 0.03 0.12 7 0 0 7 5 5 7 5 5 78.4 97.57 0.05 1 3 2 Whitelist HNSC-US 0.41 0.31 0 0 0.33 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 5 38544218 38849651 2 2 167 0 0 1 1 0 0.57 0.63 1 0 0 NA NA NA 8 4 5 78.4 55.64 41.69 1 3 NA Whitelist HNSC-US 0.68 0.84 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 4 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 6 64316686 102263021 3 3 167 0 0 2 1 0 0.3 0.01 10 0 0 10 4 5 18 5 5 78.4 96.81 0 0 4 5 Whitelist HNSC-US 0.62 0.04 0 0 0.59 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 7 22488696 22755866 2 2 167 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 9 5 5 78.4 96.1 1.1 7 4 5 Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 4 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 8 67842433 138001785 1 7 167 2 1 1 1 2 0.9 1 7 0 0 7 3 7 11 4 4 78.4 67.14 29.44 3 6 5 Whitelist HNSC-US 0.77 1 0 0 0.92 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 12 0.04 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 9 17051132 28745246 1 3 167 2 1 0 0 0 0.3 0.1 3 0 0 NA NA NA 12 3 7 78.4 68.72 28.18 0 2 3 Whitelist HNSC-US 0.62 0.27 0 0 0.59 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 10 18418035 77185408 1 3 167 1 2 0 0 0 0.3 0.26 2 0 0 NA NA NA NA NA NA 78.4 99.8 0.03 0 2 3 Whitelist HNSC-US 0.62 0.5 0 0 0.59 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 11 58815867 58860008 2 2 167 1 1 0 0 0 0.57 0.36 1 0 0 NA NA NA 4 4 4 78.4 96.24 0 0 4 NA Whitelist HNSC-US 0.68 0.61 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 4 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 12 81160637 113227257 1 2 167 1 1 0 0 0 0.57 0.1 4 NA 0 4 4 4 5 5 5 78.4 76.05 23.93 0 2 3 Whitelist HNSC-US 0.68 0.26 NA 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 4 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 13 37651639 74526091 3 5 167 1 0 1 1 2 0.8 0 11 0 0 11 4 5 31 5 6 78.4 86.96 13.04 0 3 2 Whitelist HNSC-US 0.68 0 0 0 0.84 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 8 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 14 NA NA 0 0 167 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.21 NA NA NA 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 15 54302706 97857183 2 8 167 0 0 1 1 6 0.57 0 1 0 0 NA NA NA NA NA NA 78.4 99.87 0 0 4 NA Whitelist HNSC-US 1 0.02 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 10 0.03 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 16 78872808 78899793 1 1 167 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 5 3 3 78.4 94.82 0.03 0 2 3 Whitelist HNSC-US 0.62 0.59 NA NA 0.59 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 2 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 17 10668901 78383165 1 4 167 3 0 0 0 1 0.03 0.1 10 0 0 10 3 4 13 3 5 78.4 94.83 0.08 1 3 4 Whitelist HNSC-US 0.21 0.26 0 0 0.33 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 7 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 18 19026639 22634812 1 3 167 1 1 0 0 1 0.57 0.81 5 0 0 5 3 5 8 3 3 78.4 25.82 68.9 0 3 4 Whitelist HNSC-US 0.87 0.95 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 5 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 19 NA NA 0 0 167 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.64 NA NA NA 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 20 14720984 15056834 3 3 167 3 0 0 0 0 0.03 0.03 4 0 0 4 0 3 9 4 4 78.4 92.63 0.1 0 3 1 Whitelist HNSC-US 0.41 0.11 0 0 0.33 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 6 0.02 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 21 16913273 17793486 1 2 167 0 1 1 0 0 0.57 0.06 1 0 0 NA NA NA NA NA NA 78.4 77.73 0 0 3 NA Whitelist HNSC-US 0.68 0.18 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 4 0.01 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 22 18187620 35377063 1 7 167 2 2 0 1 2 0.53 0 13 0 0 13 3 13 15 3 3 78.4 38.14 61.86 0 3 4 Whitelist HNSC-US 0.77 0.01 0 0 0.64 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 12 0.04 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::534f85f2-b9eb-45be-87d5-c3dffd13d541 X 84098326 147543923 1 5 167 3 0 1 0 1 0.11 0.03 6 0 0 6 4 6 19 4 5 78.4 60.77 35.97 0 3 4 Whitelist HNSC-US 0.45 0.11 0 0 0.48 0 No HNSC-US 534f85f2-b9eb-45be-87d5-c3dffd13d541 HNSC 0.66 3.49 Head-SCC NA 9 0.03 stopgain,17_7577022_A_G,CN:4 3 HNSC-US DO14718 TCGA-CV-7255 534f85f2-b9eb-45be-87d5-c3dffd13d541 female deceased C02.9 32 64 NA NA Included Head-SCC HNSC US 1 2.11 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 1 98290757 240716946 1 2 32 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 41.53 100 0 7 3 NA Whitelist HNSC-US 0.68 1 NA 0 0.64 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 4 0.06 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 2 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 3 3863112 60443536 1 3 32 1 2 0 0 0 0.3 0.49 4 0.02 0 4 3 4 5 3 3 41.53 0.13 99.7 11 2 1 Whitelist HNSC-US 0.62 0.73 0.02 0 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 6 0.09 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 4 116350065 116381841 1 1 32 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 4 41.53 72.43 25.2 3 1 3 Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 5 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 6 20971300 21169257 1 1 32 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 41.53 99.86 0 0 1 3 Whitelist HNSC-US 0.62 0.14 0 NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 7 110619638 110749762 1 1 32 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA NA NA NA 41.53 99.7 0.08 8 2 3 Whitelist HNSC-US 0.62 0.89 NA NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 8 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 9 21969412 139765891 1 2 32 1 1 0 0 0 0.57 0.13 1 0 0 NA NA NA NA NA NA 41.53 99.86 0 15 3 NA Whitelist HNSC-US 0.68 0.32 0 0 0.64 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 4 0.06 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 10 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 11 57502484 57515909 1 1 32 0 0 0 1 0 0.39 0.02 2 0 NA NA NA NA 8 0 0 41.53 9.47 90.1 1 2 3 Whitelist HNSC-US 0.62 0.07 0 NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 12 24297147 66812931 1 2 32 2 0 0 0 0 0.11 0.66 2 NA 0 NA NA NA NA NA NA 41.53 0.11 99.81 5 1 2 Whitelist HNSC-US 0.54 0.87 NA 0 0.48 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 4 0.06 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 14 32567084 32578412 1 1 32 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 41.53 99.09 0 0 3 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 17 NA NA 0 0 32 0 0 0 0 0 NA 0.05 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.17 0.01 NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 20 32312518 32358793 1 1 32 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 41.53 0 98.93 0 2 NA Whitelist HNSC-US 0.62 0.75 NA NA 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 2 0.03 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 21 NA NA 0 0 32 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.58 NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 0 0 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::53d9a130-4a3a-4491-85cd-9a44415a1632 X 103452487 103651503 1 3 32 0 1 0 0 2 0.39 0.22 4 NA 0 4 3 4 5 3 3 41.53 63.64 36.13 3 4 3 Whitelist HNSC-US 0.87 0.45 NA 0 0.59 0 No HNSC-US 53d9a130-4a3a-4491-85cd-9a44415a1632 HNSC 0.45 2.49 Head-SCC NA 4 0.06 NA 2 HNSC-US DO15414 TCGA-DQ-5625 53d9a130-4a3a-4491-85cd-9a44415a1632 female alive C02.9 52 NA 1058 NA Included Head-SCC HNSC US 0 34.8 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 1 19331974 239380427 1 5 108 1 2 0 0 2 0.3 0.28 3 0 0 NA NA NA NA NA NA 25.25 0.32 99.68 0 2 1 Whitelist HNSC-US 0.62 0.52 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 2 154965050 198322531 1 3 108 0 2 1 0 0 0.3 1 1 0 0 NA NA NA 5 3 3 25.25 0.04 99.87 0 2 NA Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 6 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 3 70261467 186782820 1 4 108 2 1 0 0 1 0.3 1 8 0 0 8 5 8 8 5 5 25.25 44.36 52.48 0 2 1 Whitelist HNSC-US 0.68 1 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 7 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 4 160280453 161986271 4 4 108 1 3 0 0 0 0.11 0.17 8 0 0 8 3 3 12 4 4 25.25 0.87 99.06 0 3 2 Whitelist HNSC-US 0.54 0.39 0 0 0.48 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 5 63275717 63293631 1 1 108 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 25.25 26.47 70.87 1 1 NA Whitelist HNSC-US 0.62 0.21 NA NA 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 6 63281135 64715129 1 1 108 0 1 0 0 0 0.39 0.02 3 NA NA NA NA NA 4 3 3 25.25 59.43 37.75 3 2 3 Whitelist HNSC-US 0.62 0.09 NA NA 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 7 6994260 139434213 1 11 108 2 2 1 1 5 0.88 0.05 8 0 0 8 5 8 9 5 5 25.25 22.55 77.23 0 2 1 Whitelist HNSC-US 0.87 0.16 0 0 0.91 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 17 0.08 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 8 3840089 138275111 1 6 108 3 3 0 0 0 0.11 0.07 6 0 0 6 3 4 6 3 3 25.25 38.83 60.96 0 3 1 Whitelist HNSC-US 0.54 0.21 0 0 0.48 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 12 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 9 9331501 115121916 1 5 108 3 2 0 0 0 0.14 0.62 5 0 0 5 3 4 6 3 4 25.25 65.42 31.48 0 1 0 Whitelist HNSC-US 0.62 0.83 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 10 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 10 5444947 126839349 1 4 108 2 1 0 1 0 0.57 0.82 5 0.03 0 5 5 5 6 5 5 25.25 0.3 99.52 8 2 1 Whitelist HNSC-US 0.68 0.96 0.03 0 0.64 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 11 70239579 103335560 2 6 108 0 1 1 2 2 0.57 0 13 0 0 13 4 4 25 4 4 25.25 36.03 63.9 0 9 2 Whitelist HNSC-US 0.93 0 0 0 0.64 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 10 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 12 18398623 119774435 1 5 108 2 1 0 0 2 0.3 1 2 0 0 NA NA NA NA NA NA 25.25 0.01 99.97 2 1 2 Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 13 38094935 73307341 3 5 108 2 0 1 0 2 0.3 0.03 1 0 0 NA NA NA NA NA NA 25.25 0.01 99.99 0 2 NA Whitelist HNSC-US 0.62 0.12 0 0 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 14 NA NA 0 0 108 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.24 0 NA NA 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 15 86096204 86249999 1 1 108 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 25.25 0.15 99.75 0 2 3 Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 16 588162 10693085 1 2 108 0 2 0 0 0 0.11 0.77 1 0.56 0.04 NA NA NA NA NA NA 25.25 0 99.91 0 2 NA Whitelist HNSC-US 0.54 0.93 0.56 0.04 0.48 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 17 NA NA 0 0 108 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 18 19665213 22343537 1 4 108 0 0 2 0 2 0.11 0.01 4 0 0 4 3 4 8 3 3 25.25 71.73 28.23 1 2 1 Whitelist HNSC-US 0.54 0.04 0 0 0.48 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 6 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 19 36450636 36483322 1 1 108 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 25.25 0.06 99.77 0 2 3 Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 20 48256543 48310868 1 1 108 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 25.25 0.09 98.91 0 1 2 Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 21 23704461 45392442 1 2 108 2 0 0 0 0 0.11 0.38 3 NA 0 NA NA NA NA NA NA 25.25 0.12 77.24 0 2 1 Whitelist HNSC-US 0.54 0.63 NA 0 0.48 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f 22 NA NA 0 0 108 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.62 NA NA NA 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::5fce954c-11b9-41f4-9471-4b5bdc0efa7f X NA NA 0 0 108 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.15 NA NA NA 0 No HNSC-US 5fce954c-11b9-41f4-9471-4b5bdc0efa7f HNSC 0.75 1.92 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577572_C_T;17_7578394_C_T,CN:2 2 HNSC-US DO14192 TCGA-CR-6491 5fce954c-11b9-41f4-9471-4b5bdc0efa7f male alive C04.9 60 NA 350 NA Included Head-SCC HNSC US 0 11.51 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 1 106428374 220872548 1 6 179 0 4 0 0 2 0.01 0.05 10 0 0 10 4 8 11 4 5 64.59 100 0 0 5 4 Whitelist HNSC-US 0.54 0.17 0 0 0.16 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 10 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 2 30135022 164021034 4 8 179 1 1 2 0 4 0.57 0.11 12 0 0 12 5 12 20 5 5 64.59 82.97 14.33 1 4 3 Whitelist HNSC-US 0.87 0.28 0 0 0.64 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 12 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 3 60575202 121252337 1 4 179 3 0 0 0 1 0.03 0.56 5 0 0 5 3 4 6 3 4 64.59 52.26 44.36 0 2 4 Whitelist HNSC-US 0.54 0.78 0 0 0.33 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 7 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 4 91726379 171650333 1 4 179 2 0 0 1 1 0.3 0.65 4 0 0 4 4 4 10 5 5 64.59 14.61 83.01 0 1 2 Whitelist HNSC-US 0.68 0.86 0 0 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 7 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 5 27642741 27655781 1 1 179 0 0 0 1 0 0.39 0.64 1 0 NA NA NA NA 4 3 4 64.59 26.22 71.1 0 4 NA Whitelist HNSC-US 0.62 0.85 0 NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 6 1238926 1682246 1 1 179 0 1 0 0 0 0.39 0.75 2 0 NA NA NA NA 4 4 4 64.59 99.85 0 0 3 4 Whitelist HNSC-US 0.62 0.92 0 NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 7 153108678 153131682 2 2 179 0 0 1 1 0 0.57 0.87 1 0 0 NA NA NA 11 3 3 64.59 75.87 21.44 2 2 NA Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 8 4038770 4135655 4 4 179 2 0 1 1 0 0.57 0.12 4 0 0 4 0 3 16 5 6 64.59 70.58 25.86 0 0 1 Whitelist HNSC-US 0.68 0.31 0 0 0.64 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 9 20798597 22297914 8 8 179 2 1 2 3 0 0.8 0 5 0 0 5 3 5 7 3 4 64.59 98.97 1 0 5 0 Whitelist HNSC-US 0.87 0.02 0 0 0.84 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 16 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 10 34456157 101744144 1 4 179 3 0 0 0 1 0.03 0.37 4 0 0 4 0 4 5 0 0 64.59 27.97 68.58 1 0 1 Whitelist HNSC-US 0.54 0.62 0 0 0.33 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 7 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 11 69018577 70302418 5 7 179 0 3 1 1 2 0.28 0 10 0 0 10 3 4 25 5 5 64.59 42.88 53.04 4 13 14 Whitelist HNSC-US 0.62 0.01 0 0 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 12 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 12 NA NA 0 0 179 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 1 0 NA NA 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 13 65379792 99574569 4 6 179 1 3 0 0 2 0.11 0 15 0 0 15 4 7 26 5 7 64.59 85.68 14.32 0 2 3 Whitelist HNSC-US 0.54 0 0 0 0.48 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 10 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 14 67547893 67659189 1 1 179 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 6 64.59 78.78 20.31 0 2 3 Whitelist HNSC-US 0.62 1 0 NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 15 NA NA 0 0 179 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.96 0 NA NA 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 16 10924093 63188995 1 4 179 0 1 1 1 1 0.8 0.03 11 0 0 11 5 5 14 5 5 64.59 71.43 28.48 0 3 2 Whitelist HNSC-US 1 0.11 0 0 0.84 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 7 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 17 35502073 70069761 6 17 179 2 3 1 0 11 0.34 0 26 0 0 26 4 4 34 4 4 64.59 67.98 27.56 0 2 3 Whitelist HNSC-US 0.77 0 0 0 0.59 0 Low confidence HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC With other complex events 23 0.06 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 18 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 19 NA NA 0 0 179 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 9 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 0.04 0 NA NA 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 20 36106431 36344658 1 1 179 1 0 0 0 0 0.39 0.29 1 0.04 NA NA NA NA 4 0 3 64.59 99.02 0 0 3 NA Whitelist HNSC-US 0.62 0.54 0.04 NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 21 23153814 23180151 1 1 179 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 64.59 21.1 56.25 0 2 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d 22 NA NA 0 0 179 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.03 0 NA NA 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::64bb5550-2735-4401-a0db-58ec1020a32d X 41902226 41947053 1 1 179 0 1 0 0 0 0.39 0.39 2 0.01 NA NA NA NA NA NA NA 64.59 0.03 99.97 0 2 3 Whitelist HNSC-US 0.62 0.64 0.01 NA 0.59 0 No HNSC-US 64bb5550-2735-4401-a0db-58ec1020a32d HNSC 0.36 3.11 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 HNSC-US DO15591 TCGA-CV-5431 64bb5550-2735-4401-a0db-58ec1020a32d male deceased C32.9 73 522 NA NA Included Head-SCC HNSC US 1 17.17 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 1 NA NA 0 0 142 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.01 NA NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 2 79211795 197989051 2 3 142 1 0 0 1 1 0.57 0.05 21 0 0 21 5 6 32 5 5 78.74 77.49 22.39 1 4 2 Whitelist HNSC-US 0.87 0.16 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 5 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 3 56824283 60549779 1 3 142 3 0 0 0 0 0.03 0.62 8 0 0 8 4 8 12 5 5 78.74 52.67 44.14 0 2 1 Whitelist HNSC-US 0.41 0.84 0 0 0.33 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 4 19401657 19544833 2 2 142 2 0 0 0 0 0.11 0.61 6 0 0 6 5 6 11 6 6 78.74 99.79 0.11 0 2 1 Whitelist HNSC-US 0.54 0.83 0 0 0.48 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 5 120876425 173706079 1 2 142 1 0 1 0 0 0.57 0.39 4 0 0 4 0 3 16 4 7 78.74 95.16 2.17 3 2 3 Whitelist HNSC-US 0.68 0.63 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 6 69554956 74861818 1 1 142 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 4 78.74 44.17 55.68 0 1 3 Whitelist HNSC-US 0.62 0.06 NA NA 0.59 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 7 80744504 112927130 4 5 142 1 2 0 1 1 0.57 0.13 5 0 0 5 3 5 17 4 4 78.74 97.34 0.11 0 3 2 Whitelist HNSC-US 0.93 0.32 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 9 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 8 31964367 106983705 1 3 142 2 1 0 0 0 0.3 0.33 5 0 0 5 4 5 6 5 5 78.74 99.99 0 13 4 5 Whitelist HNSC-US 0.62 0.59 0 0 0.59 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 9 NA NA 0 0 142 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.87 NA NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 10 93802634 93824451 1 1 142 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 78.74 99.84 0 0 4 NA Whitelist HNSC-US 0.62 0.46 NA NA 0.59 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 11 27427076 70964638 1 7 142 2 0 1 1 3 0.57 0 24 0 0 24 3 4 32 3 4 78.74 99.57 0 8 1 4 Whitelist HNSC-US 0.62 0.02 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 11 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 12 38980826 68672816 1 10 142 1 0 0 1 8 0.57 0 7 0 0 7 3 3 13 4 4 78.74 99.49 0.43 1 6 7 Whitelist HNSC-US 4 0.62 0.02 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 12 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 13 69066547 94539782 1 2 142 2 0 0 0 0 0.11 0.82 4 0 0 4 4 4 6 6 6 78.74 82.24 17.76 0 2 3 Whitelist HNSC-US 0.54 0.96 0 0 0.48 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 14 43305352 46218578 7 8 142 2 3 1 1 1 0.67 0 14 0 0 14 0 3 37 3 4 78.74 77.58 6.5 3 8 1 Whitelist HNSC-US 0.87 0 0 0 0.74 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 15 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 15 NA NA 0 0 142 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 16 82701077 82727821 1 1 142 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 78.74 99.91 0 1 4 5 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 17 1977842 57918976 1 5 142 3 0 0 0 2 0.03 0.44 6 0 0 6 6 6 7 7 7 78.74 100 0 1 3 4 Whitelist HNSC-US 0.62 0.69 0 0 0.33 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 18 11156522 13305780 2 4 142 1 1 0 0 2 0.57 0.01 6 0 0 6 0 3 16 6 6 78.74 78.66 16.68 0 7 2 Whitelist HNSC-US 0.54 0.06 0 0 0.64 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 6 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 19 NA NA 0 0 142 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 13 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0 0 NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 20 NA NA 0 0 142 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 0.63 NA NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 21 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 22 NA NA 0 0 142 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.04 0 NA NA 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::6909302d-358a-46cd-8052-eedb09c83c83 X 28784292 123863908 1 4 142 4 0 0 0 0 0.01 0.85 3 0 0 NA NA NA NA NA NA 78.74 0.09 99.91 1 2 1 Whitelist HNSC-US 0.21 0.98 0 0 0.16 0 No HNSC-US 6909302d-358a-46cd-8052-eedb09c83c83 HNSC 0.58 3.53 Head-SCC NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577090_G_C;17_7578406_T_C,CN:4 1 HNSC-US DO15398 TCGA-CN-6994 6909302d-358a-46cd-8052-eedb09c83c83 male alive C14.8 67 NA 119 NA Included Head-SCC HNSC US 0 3.91 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 1 246049427 246134524 1 1 33 1 0 0 0 0 0.39 0.74 2 0 NA NA NA NA 8 6 6 12.65 0.36 99.64 0 1 2 Whitelist HNSC-US 0.62 0.91 0 NA 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 2 154807284 206245605 1 3 33 2 1 0 0 0 0.3 0.19 6 0 0 6 6 6 7 7 7 12.65 0.14 99.76 0 1 2 Whitelist HNSC-US 0.62 0.42 0 0 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 6 0.09 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 3 NA NA 0 0 33 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 4 160728661 160810830 1 1 33 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 12.65 0 99.81 0 2 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 5 58415740 58456960 1 1 33 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 4 3 3 12.65 25.48 71.84 0 1 2 Whitelist HNSC-US 0.62 0.7 0 NA 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 6 106977660 107063743 1 1 33 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 12.65 0 99.76 0 2 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 7 69617467 110996066 1 2 33 2 0 0 0 0 0.11 0.26 2 0.01 0 NA NA NA NA NA NA 12.65 0.03 99.74 0 0 2 Whitelist HNSC-US 0.54 0.5 0.01 0 0.48 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 4 0.06 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 8 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 9 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 11 9110486 9123682 1 1 33 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 12.65 96.4 0 0 3 NA Whitelist HNSC-US 0.62 0.87 NA NA 0.59 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 12 24439756 120939495 1 3 33 1 1 1 0 0 0.8 0.07 6 0 0 6 5 6 7 5 5 12.65 0.05 99.87 1 2 3 Whitelist HNSC-US 0.87 0.2 0 0 0.84 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 6 0.09 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 13 25536160 50729780 1 2 33 1 1 0 0 0 0.57 0.1 1 0 0 NA NA NA NA NA NA 12.65 0 85.85 0 2 NA Whitelist HNSC-US 0.68 0.27 0 0 0.64 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 4 0.06 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 15 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.82 NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 16 79102791 83257387 1 2 33 1 1 0 0 0 0.57 0.22 3 NA 0 NA NA NA NA NA NA 12.65 0.58 99.32 0 2 1 Whitelist HNSC-US 0.68 0.45 NA 0 0.64 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 4 0.06 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 17 NA NA 0 0 33 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.46 NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::70741b73-9683-42bd-87fc-6a021a70103b X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 70741b73-9683-42bd-87fc-6a021a70103b HNSC 0.29 2.13 Head-SCC NA 0 0 NA 2 HNSC-US DO14232 TCGA-BA-5556 70741b73-9683-42bd-87fc-6a021a70103b female alive C04.9 58 NA 179 NA Included Head-SCC HNSC US 0 5.89 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 1 NA NA 0 0 140 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.01 NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 2 131031267 180240611 1 7 140 1 2 1 0 3 0.57 0.88 10 0 0 10 3 9 12 3 4 42.49 59.89 37.43 0 1 2 Whitelist HNSC-US 0.77 1 0 0 0.64 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 11 0.04 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 3 31944754 197161027 1 9 140 1 2 0 0 6 0.3 0.62 9 0 0 9 3 8 10 3 3 42.49 96.82 0.01 3 1 3 Whitelist HNSC-US 0.62 0.83 0 0 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 12 0.04 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 4 NA NA 0 0 140 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.39 0 NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 5 NA NA 0 0 140 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.17 NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 6 132384731 147888916 8 18 140 1 1 2 4 10 0.39 0 36 0 0 36 4 5 41 4 4 42.49 46.15 51.03 9 4 8 Whitelist HNSC-US 0.87 0 0 0 0.59 0 Low confidence HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC With other complex events 26 0.09 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 7 57473207 100202589 1 6 140 0 1 1 2 2 0.57 0.02 8 0 0 8 4 6 16 4 4 42.49 89.21 7.81 9 1 2 Whitelist HNSC-US 0.54 0.09 0 0 0.64 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 10 0.04 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 8 4148371 14296847 1 2 140 2 0 0 0 0 0.11 0.56 3 0.12 0 NA NA NA 7 5 5 42.49 92.01 7.94 0 1 2 Whitelist HNSC-US 0.54 0.79 0.12 0 0.48 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 4 0.01 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 9 21921962 119995871 1 4 140 2 0 0 0 2 0.11 0.67 3 0.01 0 NA NA NA 4 3 3 42.49 48.44 51.42 0 0 1 Whitelist HNSC-US 0.68 0.87 0.02 0 0.48 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 6 0.02 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 10 NA NA 0 0 140 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist HNSC-US NA 0.46 NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 11 70258646 70558649 3 3 140 1 1 1 0 0 0.8 0.1 5 0 0 5 0 3 12 3 3 42.49 47.64 51.93 0 1 3 Whitelist HNSC-US 0.87 0.27 0 0 0.84 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 6 0.02 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 12 NA NA 0 0 140 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.67 NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 13 20054005 20130084 1 1 140 1 0 0 0 0 0.39 0.64 1 NA NA NA NA NA NA NA NA 42.49 0 100 0 2 NA Whitelist HNSC-US 0.62 0.85 NA NA 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 2 0.01 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 14 37204606 75501405 13 22 140 6 4 2 1 9 0.21 0 27 0 0 27 4 4 33 4 4 42.49 67.7 31.39 20 4 6 Whitelist HNSC-US 0.62 0 0 0 0.59 0 Low confidence HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC With other complex events 35 0.12 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 15 20573613 88196443 1 4 140 2 0 1 0 1 0.3 0.29 5 0 0 5 0 3 5 0 3 42.49 16.08 79.02 0 2 3 Whitelist HNSC-US 0.62 0.54 0 0 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 7 0.02 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 16 56444067 89001559 8 9 140 2 3 2 1 1 0.8 0 16 0 0 16 6 8 18 6 6 42.49 49.3 50.47 2 2 1 Whitelist HNSC-US 0.68 0 0 0 0.84 0 Low confidence HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC With other complex events 17 0.06 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 17 77037741 77060993 1 1 140 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 5 3 3 42.49 0.1 99.88 0 1 2 Whitelist HNSC-US 0.62 0.68 0 NA 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 2 0.01 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 18 3674300 34010984 1 5 140 1 0 2 1 1 0.57 0 13 0 0 13 4 7 18 4 4 42.49 94.02 1.35 0 4 8 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 9 0.03 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 19 NA NA 0 0 140 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA 5 0 5 0 0 0 0 0 0 Whitelist HNSC-US NA 0.92 NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 20 13060012 13082346 1 1 140 0 1 0 0 0 0.39 0.23 1 0 NA NA NA NA 4 4 4 42.49 31.93 67.1 1 2 NA Whitelist HNSC-US 0.62 0.47 0 NA 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 2 0.01 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 21 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 22 46357138 46377673 1 1 140 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 42.49 3.66 96.34 0 2 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 2 0.01 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 X NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 HNSC 0.83 1.95 Head-SCC NA 0 0 nonsynonymous_SNV;frameshift_insertion,17_7578523_G_T;17_7579470_G_-,CN:2 2 HNSC-US DO14502 TCGA-BA-4076 7de19081-d5fd-468c-ad0d-f6e3e8b2ad70 male deceased C32.9 39 415 NA NA Included Head-SCC HNSC US 1 13.65 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 4 118152567 118175859 1 1 3 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 0.39 0 99.99 0 2 NA Whitelist HNSC-US 0.62 0.41 NA NA 0.59 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 2 0.33 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 5 72430374 72443862 1 1 3 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 0.39 0 99.88 0 2 NA Whitelist HNSC-US 0.62 0.39 NA NA 0.59 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 2 0.33 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 16 54918854 60879429 1 1 3 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 0.39 0 99.9 0 2 NA Whitelist HNSC-US 0.62 0.22 NA NA 0.59 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 2 0.33 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::832316ee-08ab-412b-9e4d-8a57ff84bc11 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 832316ee-08ab-412b-9e4d-8a57ff84bc11 HNSC 0.25 2 Head-SCC NA 0 0 NA 2 HNSC-US DO15198 TCGA-CR-7391 832316ee-08ab-412b-9e4d-8a57ff84bc11 female alive C02.9 36 NA 913 NA Included Head-SCC HNSC US 0 30.03 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 1 4277622 5714209 2 2 53 0 0 1 1 0 0.57 1 4 0.02 0 4 4 4 7 5 5 47.13 0.48 99.52 0 1 2 Whitelist HNSC-US 0.68 1 0.02 0 0.64 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 4 0.04 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 2 155365569 232374079 4 4 53 2 0 1 1 0 0.57 0 11 0 0 11 5 9 12 5 5 47.13 1.27 98.64 0 2 1 Whitelist HNSC-US 0.68 0.01 0 0 0.64 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 8 0.08 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 3 159732382 159746162 1 1 53 0 0 1 0 0 0.39 1 1 0 0 NA NA NA NA NA NA 47.13 96.83 0 0 3 NA Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 2 0.02 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 4 170133156 181548862 1 2 53 2 0 0 0 0 0.11 0.58 4 NA 0 4 4 4 5 5 5 47.13 1.55 98.44 0 1 2 Whitelist HNSC-US 0.54 0.81 NA 0 0.48 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 4 0.04 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 5 154167226 178094450 1 3 53 3 0 0 0 0 0.03 0.57 6 0 0 6 4 6 7 4 4 47.13 94.08 5.8 0 2 3 Whitelist HNSC-US 0.41 0.8 0 0 0.33 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 6 0.06 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 6 145334019 146615689 1 1 53 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 7 5 5 47.13 1.27 98.59 0 1 2 Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 2 0.02 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 7 87042196 148506346 4 5 53 1 1 1 1 1 1 0.01 3 0 0 NA NA NA NA NA NA 47.13 0.05 99.72 1 2 1 Whitelist HNSC-US 0.93 0.03 0 0 1 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 9 0.08 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 8 122122210 139923159 2 2 53 0 0 1 1 0 0.57 0.35 3 0 0 NA NA NA 5 5 5 47.13 99.99 0 0 4 3 Whitelist HNSC-US 0.68 0.6 0 0 0.64 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 4 0.04 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 9 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 10 9722073 10114777 1 1 53 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 47.13 0.29 99.53 0 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 2 0.02 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 11 88247367 134718074 3 5 53 2 1 0 0 2 0.3 0.04 5 0 0 5 5 5 6 6 6 47.13 33.71 65.93 0 1 2 Whitelist HNSC-US 0.62 0.13 0 0 0.59 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 8 0.08 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 12 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 13 33157121 96247081 1 3 53 1 0 0 0 2 0.39 0.43 3 NA 0 NA NA NA 4 0 3 47.13 98.76 0.37 0 1 2 Whitelist HNSC-US 0.62 0.68 NA 0 0.59 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 4 0.04 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 14 84395864 106500947 1 2 53 2 0 0 0 0 0.11 0.68 3 NA 0 NA NA NA 4 3 3 47.13 20.59 78.62 0 1 0 Whitelist HNSC-US 0.54 0.88 NA 0 0.48 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 4 0.04 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 15 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 16 NA NA 0 0 53 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.86 NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 17 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 18 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 19 NA NA 0 0 53 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.52 NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 20 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::89f91e36-fed8-4da3-8a35-c761d6f65285 X NA NA 0 0 53 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US 89f91e36-fed8-4da3-8a35-c761d6f65285 HNSC 0.65 2.28 Head-SCC NA 0 0 NA 3 HNSC-US DO14942 TCGA-CR-6467 89f91e36-fed8-4da3-8a35-c761d6f65285 male alive C09.9 59 NA 1777 NA Included Head-SCC HNSC US 0 58.45 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 1 14235880 15025741 2 5 157 0 0 1 1 3 0.57 0.05 1 0 0 NA NA NA 7 3 3 81.4 99.86 0 0 4 NA Whitelist HNSC-US 0.62 0.17 0 0 0.64 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 7 0.02 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 2 85086272 238090635 2 8 157 0 0 2 2 4 0.26 0.01 15 0 0 15 3 11 19 5 5 81.4 97.13 2.77 8 4 2 Whitelist HNSC-US 4 0.41 0.04 0 0 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 12 0.04 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 3 29195192 175115319 1 7 157 2 0 0 0 5 0.11 0.12 6 0 0 6 3 3 8 4 4 81.4 54.01 42.91 7 4 0 Whitelist HNSC-US 0.47 0.3 0 0 0.48 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 9 0.03 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 4 182396586 189699437 2 2 157 0 0 2 0 0 0.11 0.05 5 0 0 5 5 5 18 8 12 81.4 99.65 0.13 1 1 3 Whitelist HNSC-US 0.54 0.17 0 0 0.48 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 4 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 5 12762494 150252736 1 3 157 0 2 0 0 1 0.11 0.41 3 0 0 NA NA NA NA NA NA 81.4 25.45 71.86 0 2 6 Whitelist HNSC-US 0.62 0.66 0 0 0.48 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 5 0.02 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 6 37948383 37995074 1 1 157 1 0 0 0 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 81.4 99.87 0 0 4 NA Whitelist HNSC-US 0.62 0.75 0 NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 7 5427289 5646240 2 2 157 0 0 1 1 0 0.57 0.21 2 0 0 NA NA NA 7 3 3 81.4 87.04 12.73 0 4 6 Whitelist HNSC-US 0.68 0.44 0 0 0.64 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 4 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 8 4029641 48673670 2 6 157 2 0 1 1 2 0.57 0 7 0 0 7 4 5 22 6 8 81.4 90.09 9.91 0 3 2 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 10 0.03 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 9 9987384 97827309 1 4 157 3 1 0 0 0 0.11 0.68 5 0 0 5 3 5 6 4 4 81.4 99.3 0 0 4 3 Whitelist HNSC-US 0.54 0.88 0 0 0.48 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 8 0.03 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 10 NA NA 0 0 157 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.05 NA NA NA 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 0 0 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 11 30340693 82545428 1 14 157 6 0 0 2 6 0.01 0 18 0 0 18 3 5 19 3 5 81.4 99.51 0.06 7 5 4 Whitelist HNSC-US 0.08 0 0 0 0.16 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 22 0.07 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 12 26515048 26532955 1 1 157 0 1 0 0 0 0.39 0.45 2 0 NA NA NA NA NA NA NA 81.4 99.92 0 0 4 6 Whitelist HNSC-US 0.62 0.7 0 NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 13 73199563 114880696 1 4 157 1 2 0 0 1 0.3 0.66 3 0 0 NA NA NA 8 3 4 81.4 99.75 0 1 4 6 Whitelist HNSC-US 0.68 0.87 0 0 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 7 0.02 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 14 50748644 91667040 1 2 157 1 1 0 0 0 0.57 0.82 2 0 0 NA NA NA NA NA NA 81.4 99.12 0 1 4 6 Whitelist HNSC-US 0.68 0.96 0 0 0.64 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 4 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 15 27083724 97892626 1 3 157 1 2 0 0 0 0.3 0.81 7 0 0 7 4 7 8 5 8 81.4 99.9 0 0 4 6 Whitelist HNSC-US 0.62 0.95 0 0 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 6 0.02 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 16 78996062 79386138 1 1 157 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 81.4 99.91 0 0 4 6 Whitelist HNSC-US 0.62 0.7 NA NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 17 79762287 79867961 1 1 157 1 0 0 0 0 0.39 0.62 1 0.05 NA NA NA NA 4 3 3 81.4 95.54 0 0 4 NA Whitelist HNSC-US 0.62 0.83 0.05 NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 18 NA NA 0 0 157 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.95 NA NA NA 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 0 0 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 19 NA NA 0 0 157 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 0 0 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 20 8401530 8491539 1 1 157 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 81.4 99.01 0 0 5 6 Whitelist HNSC-US 0.62 0.51 NA NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 21 NA NA 0 0 157 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 0 0 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 22 33899657 34345590 1 1 157 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA NA NA NA 81.4 99.13 0.87 0 2 4 Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 2 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8c238d30-df8e-4e6b-98fc-21696269a294 X 96295437 96435690 1 2 157 2 0 0 0 0 0.11 0.36 2 0 0 NA NA NA 5 5 5 81.4 0.09 99.91 0 1 2 Whitelist HNSC-US 0.54 0.62 0 0 0.48 0 No HNSC-US 8c238d30-df8e-4e6b-98fc-21696269a294 HNSC 0.57 3.64 Head-SCC NA 4 0.01 frameshift_deletion,17_7579356_-_GACG,CN:4 4 HNSC-US DO15815 TCGA-CV-6956 8c238d30-df8e-4e6b-98fc-21696269a294 male deceased C02.9 67 217 NA NA Included Head-SCC HNSC US 1 7.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 1 174937856 175831714 1 1 216 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 7 3 3 64.59 82.73 17.27 0 3 4 Whitelist HNSC-US 0.62 0.04 0 NA 0.59 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 2 96971732 98286349 12 16 216 1 2 5 4 4 0.34 0 4 0 0 4 0 3 27 7 11 64.59 43.99 53.33 0 18 19 Whitelist HNSC-US 0.54 0 0 0 0.59 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 28 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 3 60453954 60643783 3 3 216 3 0 0 0 0 0.03 0.35 5 0 0 5 4 5 14 4 6 64.59 50.82 49.04 0 0 1 Whitelist HNSC-US 0.41 0.6 0 0 0.33 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 6 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 4 34833442 187952431 1 8 216 5 0 0 0 3 0 0.28 7 0 0 7 3 5 9 4 5 64.59 76.44 21.1 0 3 2 Whitelist HNSC-US 0.54 0.52 0 0 0.07 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 13 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 5 13886260 29002508 1 1 216 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 6 3 4 64.59 25.47 71.85 0 3 4 Whitelist HNSC-US 0.62 0.05 0 NA 0.59 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 6 41009612 124952523 1 4 216 2 1 0 0 1 0.3 1 7 0 0 7 4 7 10 5 5 64.59 99.68 0.17 0 3 4 Whitelist HNSC-US 0.54 1 0 0 0.59 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 7 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 7 110029584 145984069 1 4 216 4 0 0 0 0 0.01 0.05 3 0 0 NA NA NA NA NA NA 64.59 99.78 0 0 3 1 Whitelist HNSC-US 0.21 0.16 0 0 0.16 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 8 3355539 130903757 1 7 216 4 0 0 0 3 0.01 0.44 10 0 0 10 5 5 11 5 5 64.59 67.24 29.34 0 2 3 Whitelist HNSC-US 11 0.62 0.69 0 0 0.16 0 Linked to low confidence HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC With other complex events 11 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 9 9442963 97828182 1 5 216 4 0 0 0 1 0.01 0.29 8 0.01 0 8 6 8 9 7 7 64.59 6.77 93.08 0 2 1 Whitelist HNSC-US 0.1 0.54 0.01 0 0.16 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 9 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 10 30606907 39023398 5 5 216 1 1 2 1 0 0.9 0 6 0 0 6 3 5 22 3 4 64.59 49.02 47.56 2 4 1 Whitelist HNSC-US 0.93 0.02 0 0 0.92 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 10 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 11 78556791 103094093 24 24 216 5 7 6 6 0 0.95 0 34 0 0 34 5 6 66 5 6 64.59 69.75 26.44 7 15 17 Whitelist HNSC-US 0.97 0 0 0 0.97 0 Low confidence HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC With other complex events 48 0.11 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 12 100598648 113572758 1 2 216 1 1 0 0 0 0.57 0.87 1 0 0 NA NA NA NA NA NA 64.59 99.92 0 0 3 NA Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 13 NA NA 0 0 216 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.99 0 NA NA 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 14 65614460 86399189 1 2 216 2 0 0 0 0 0.11 0.84 3 0 0 NA NA NA 8 3 3 64.59 83.54 0.55 0 4 2 Whitelist HNSC-US 0.54 0.98 0 0 0.48 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 15 60707029 60752823 1 1 216 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 64.59 99.92 0 0 3 NA Whitelist HNSC-US 0.62 0.12 NA NA 0.59 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 16 6500766 53266331 1 4 216 4 0 0 0 0 0.01 1 8 0 0 8 5 8 9 5 5 64.59 94.36 1.12 0 3 2 Whitelist HNSC-US 0.21 1 0 0 0.16 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 17 67791573 68246278 2 2 216 0 0 1 1 0 0.57 0.67 3 0 0 NA NA NA 9 3 7 64.59 81.94 13.28 0 3 1 Whitelist HNSC-US 0.68 0.87 0 0 0.64 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 18 NA NA 0 0 216 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.33 NA NA NA 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 19 NA NA 0 0 216 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.33 NA NA NA 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 20 14584616 30675371 1 3 216 1 1 1 0 0 0.8 1 6 0 0 6 0 4 7 3 3 64.59 92.97 0 0 3 4 Whitelist HNSC-US 0.87 1 0 0 0.84 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 6 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 21 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb 22 19657833 19681169 2 2 216 0 0 1 1 0 0.57 0.12 3 0 0 NA NA NA 8 3 5 64.59 7.75 92.25 0 4 5 Whitelist HNSC-US 0.68 0.3 0 0 0.64 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::8fc1f1be-d2d5-4b3a-9973-f4d964018beb X 29134673 29437664 2 2 216 2 0 0 0 0 0.11 1 1 0 0 NA NA NA 7 3 3 64.59 37.58 59.03 0 3 NA Whitelist HNSC-US 0.54 1 0 0 0.48 0 No HNSC-US 8fc1f1be-d2d5-4b3a-9973-f4d964018beb HNSC 0.71 2.99 Head-SCC NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:3 3 HNSC-US DO15014 TCGA-CV-5973 8fc1f1be-d2d5-4b3a-9973-f4d964018beb female alive C02.9 62 NA 1737 NA Included Head-SCC HNSC US 0 57.14 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 1 95069934 209707197 1 3 67 0 2 0 0 1 0.11 0.49 4 NA 0 4 4 4 5 5 5 23.48 0.07 99.93 0 2 3 Whitelist HNSC-US 0.41 0.74 NA 0 0.48 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 5 0.04 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 2 59368137 77472164 1 2 67 0 2 0 0 0 0.11 0.12 4 NA 0 4 4 4 5 5 5 23.48 0.11 99.79 0 2 3 Whitelist HNSC-US 0.54 0.31 NA 0 0.48 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 3 189500145 189653193 1 3 67 0 3 0 0 0 0.03 0.81 5 0 0 5 0 3 11 3 4 23.48 96.85 0 0 5 6 Whitelist HNSC-US 0.41 0.96 0 0 0.33 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 6 0.04 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 4 1741366 28488055 1 3 67 1 1 1 0 0 0.8 0.8 4 0.01 0 4 4 4 5 5 5 23.48 0.12 99.67 0 2 3 Whitelist HNSC-US 0.87 0.95 0.01 0 0.84 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 6 0.04 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 5 NA NA 0 0 67 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.32 NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 6 31104518 38428589 1 2 67 1 1 0 0 0 0.57 0.44 4 NA 0 4 3 4 5 3 3 23.48 0.24 99.62 0 2 1 Whitelist HNSC-US 0.68 0.69 NA 0 0.64 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 7 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 8 36921546 39846371 1 5 67 1 0 2 0 2 0.3 0.02 11 0 0 11 4 5 13 4 5 23.48 28.23 71.76 0 1 2 Whitelist HNSC-US 0.93 0.08 0 0 0.59 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 8 0.06 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 9 21660080 21808076 1 1 67 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 23.48 47.11 52.22 0 2 NA Whitelist HNSC-US 0.62 0.76 NA NA 0.59 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 10 37240272 101428702 1 2 67 0 1 0 1 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 23.48 27.72 68.68 0 1 2 Whitelist HNSC-US 0.68 0.93 NA 0 0.64 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 11 15147379 100462923 24 24 67 9 7 3 5 0 0.34 0 26 0 0 26 5 8 32 5 8 23.48 53.54 45.9 0 2 3 Whitelist HNSC-US 0.62 0 0 0 0.59 0 Low confidence HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC With other complex events 48 0.36 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 12 32768207 33544030 1 2 67 1 0 1 0 0 0.57 0.56 4 0 0 4 3 4 9 3 3 23.48 23.48 72.78 0 2 1 Whitelist HNSC-US 0.68 0.78 0 0 0.64 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 13 43458536 74155066 1 4 67 0 2 1 1 0 0.57 0.3 5 0 0 5 3 3 6 4 4 23.48 99.73 0.27 0 1 2 Whitelist HNSC-US 0.68 0.54 0 0 0.64 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 8 0.06 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 14 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 15 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 16 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 17 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 18 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 19 10980872 16638088 1 3 67 2 0 0 0 1 0.11 0.01 6 0.1 0 6 4 4 10 4 5 23.48 41.09 51.63 0 1 4 Whitelist HNSC-US 0.62 0.05 0.1 0 0.48 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 5 0.04 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 20 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 21 NA NA 0 0 67 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.79 NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 22 46953519 47086588 1 1 67 0 0 0 1 0 0.39 0.55 2 NA NA NA NA NA 4 3 4 23.48 0.26 88.63 0 1 2 Whitelist HNSC-US 0.62 0.78 NA NA 0.59 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 2 0.01 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::90a8d2cb-1f31-45f9-8575-eed3cb9a7798 X NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 HNSC 0.61 1.9 Head-SCC NA 0 0 NA 2 HNSC-US DO15503 TCGA-CV-7100 90a8d2cb-1f31-45f9-8575-eed3cb9a7798 male deceased C14.8 66 274 NA NA Included Head-SCC HNSC US 1 9.01 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 1 102088670 248366137 1 2 60 1 0 0 1 0 0.57 1 4 0 0 4 3 4 5 3 3 30.04 7.78 88.87 5 2 1 Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 2 183894811 184025064 1 1 60 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 30.04 0.05 99.85 2 1 2 Whitelist HNSC-US 0.62 0.19 NA NA 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 3 29914916 165541241 2 7 60 2 0 1 1 3 0.57 0 17 0 0 17 3 3 23 3 3 30.04 71.51 25.32 3 1 3 Whitelist HNSC-US 0.77 0 0 0 0.64 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 11 0.09 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 4 134044431 134146703 1 1 60 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 30.04 99.93 0.05 0 1 2 Whitelist HNSC-US 0.62 0.41 NA NA 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 5 149387771 149481638 1 5 60 1 0 0 0 4 0.39 0 1 0 0 NA NA NA NA NA NA 30.04 0 99.86 2 2 NA Whitelist HNSC-US 0.68 0.01 0 0 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 6 0.05 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 6 6124849 67283307 1 4 60 0 2 0 0 2 0.11 0.17 5 0.05 0 5 4 5 10 4 6 30.04 34.68 65.18 8 2 3 Whitelist HNSC-US 0.54 0.39 0.05 0 0.48 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 6 0.05 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 7 142958661 142992348 1 1 60 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 30.04 0.2 99.58 2 2 NA Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 8 128149415 128418902 2 2 60 0 0 1 1 0 0.57 0.13 2 0 0 NA NA NA 6 3 4 30.04 59.46 40.53 0 3 4 Whitelist HNSC-US 0.68 0.32 0 0 0.64 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 9 131844237 136039469 3 3 60 0 1 1 1 0 0.8 0.09 5 0 0 5 3 5 7 3 3 30.04 24.74 75.09 0 2 3 Whitelist HNSC-US 0.87 0.24 0 0 0.84 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 6 0.05 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 10 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 11 91658615 91678192 1 1 60 0 1 0 0 0 0.39 0.76 2 NA NA NA NA NA 5 3 5 30.04 50.62 48.95 0 1 2 Whitelist HNSC-US 0.62 0.92 NA NA 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 12 NA NA 0 0 60 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 13 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 14 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 15 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 16 2203771 70455927 1 7 60 0 1 1 0 5 0.57 0 5 0 0 5 3 5 5 3 3 30.04 19.24 80.65 1 2 1 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 9 0.08 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 17 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 18 NA NA 0 0 60 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.88 NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 19 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 20 14377298 14391738 1 1 60 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 30.04 0 98.99 0 2 NA Whitelist HNSC-US 0.62 0.62 NA NA 0.59 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 2 0.02 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 22 NA NA 0 0 60 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.75 NA NA NA 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 0 0 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9ae5101b-6031-4ab1-bfca-198c41af3184 X 22910321 134552652 1 2 60 2 0 0 0 0 0.11 0.23 4 0 0 4 4 4 5 4 4 30.04 69.15 30.82 2 1 2 Whitelist HNSC-US 0.54 0.46 0 0 0.48 0 No HNSC-US 9ae5101b-6031-4ab1-bfca-198c41af3184 HNSC 0.41 2.04 Head-SCC NA 4 0.03 NA 2 HNSC-US DO15527 TCGA-CR-6487 9ae5101b-6031-4ab1-bfca-198c41af3184 male alive C09.9 50 NA 234 NA Included Head-SCC HNSC US 0 7.7 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 1 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 2 2104638 49041392 7 7 34 0 1 3 3 0 0.28 0 3 0 0 NA NA NA NA NA NA 11.16 0.3 99.6 0 2 1 Whitelist HNSC-US 0.62 0.01 0 0 0.59 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 14 0.21 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 3 1802334 84406039 1 1 34 1 0 0 0 0 0.39 0.73 3 NA NA NA NA NA 5 3 3 11.16 32.66 67.2 1 2 1 Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 2 0.03 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 4 14482294 31017250 2 2 34 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 11.16 0 99.77 0 2 NA Whitelist HNSC-US 0.68 1 NA 0 0.64 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 4 0.06 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 5 NA NA 0 0 34 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 6 62189680 62586622 2 2 34 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA NA NA NA 11.16 18.62 81.22 0 2 NA Whitelist HNSC-US 0.54 0.06 0 0 0.48 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 4 0.06 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 8 NA NA 0 0 34 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.25 NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 9 11367796 11444435 2 2 34 0 0 1 1 0 0.57 0.39 1 NA 0 NA NA NA NA NA NA 11.16 0 99.3 0 2 NA Whitelist HNSC-US 0.68 0.63 NA 0 0.64 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 4 0.06 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 10 66968454 90301300 1 3 34 1 0 1 1 0 0.8 0.2 3 NA 0 NA NA NA NA NA NA 11.16 0.41 99.41 0 2 1 Whitelist HNSC-US 0.87 0.43 NA 0 0.84 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 6 0.09 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 11 72299004 130239364 2 2 34 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 5 5 5 11.16 28.19 71.37 0 2 1 Whitelist HNSC-US 0.54 0.21 0 0 0.48 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 4 0.06 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 13 80706521 80720014 1 1 34 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 11.16 0 100 0 2 NA Whitelist HNSC-US 0.62 0.03 0 NA 0.59 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 2 0.03 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 0 0 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9e178d80-fe90-4998-9dae-726c4beceef7 X 91268121 96093128 1 1 34 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 11.16 100 0 0 1 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 9e178d80-fe90-4998-9dae-726c4beceef7 HNSC 0.71 1.87 Head-SCC NA 2 0.03 NA 2 HNSC-US DO16015 TCGA-CR-5250 9e178d80-fe90-4998-9dae-726c4beceef7 male alive C01 71 NA 799 NA Included Head-SCC HNSC US 0 26.28 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 2 NA NA 0 0 27 0 0 0 0 0 NA 0.28 NA 0.56 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist HNSC-US NA 0.52 0.56 NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 3 NA NA 0 0 27 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 4 NA NA 0 0 27 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.27 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 5 91836779 92166286 1 1 27 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.55 0 99.85 1 2 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 2 0.04 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 6 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 7 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 11 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 12 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 14 NA NA 0 0 27 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.8 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 16 78237750 78354156 1 1 27 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 19.55 0 99.9 0 2 NA Whitelist HNSC-US 0.62 0.76 NA NA 0.59 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 2 0.04 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 17 54968175 59340757 4 4 27 2 1 0 1 0 0.57 0 3 0 0 NA NA NA 5 5 5 19.55 37.37 62.63 0 2 1 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 8 0.15 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 19 NA NA 0 0 27 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.66 NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 20 15638887 15722600 1 1 27 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 19.55 0 99.01 0 2 NA Whitelist HNSC-US 0.62 0.29 NA NA 0.59 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 2 0.04 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 21 43043412 43113138 3 3 27 1 2 0 0 0 0.3 0 5 0 0 5 3 3 8 3 4 19.55 7.26 70.09 0 3 4 Whitelist HNSC-US 0.62 0 0 0 0.59 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 6 0.11 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::9f89510c-ed07-471f-b35e-7c87c237b9fe X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US 9f89510c-ed07-471f-b35e-7c87c237b9fe HNSC 0.48 1.86 Head-SCC NA 0 0 NA 2 HNSC-US DO14282 TCGA-CR-7385 9f89510c-ed07-471f-b35e-7c87c237b9fe male alive C09.9 42 NA 997 NA Included Head-SCC HNSC US 0 32.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 1 67961363 68173060 3 3 360 1 2 0 0 0 0.3 0.56 3 0 0 NA NA NA 27 6 7 71.42 100 0 0 4 5 Whitelist HNSC-US 0.62 0.78 0 0 0.59 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 6 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 2 11206728 231985619 1 18 360 7 1 0 0 10 0 0.18 15 0 0 15 6 10 15 6 10 71.42 99.64 0.26 14 4 2 Whitelist HNSC-US 0.54 0.4 0 0 0.04 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 26 0.04 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 3 48762562 189108050 1 18 360 3 5 0 0 10 0.03 0.76 12 0 0 12 4 6 14 5 7 71.42 52.8 44.04 7 2 3 Whitelist HNSC-US 11_8 0.54 0.92 0 0 0.33 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 26 0.04 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 4 52783484 187472712 7 15 360 2 2 2 1 8 0.93 0.03 44 0 0 44 8 13 50 8 8 71.42 44.5 53.06 0 2 3 Whitelist HNSC-US 0.93 0.1 0 0 0.95 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 22 0.03 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 False positive; manually removed HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 5 28152585 170473787 1 7 360 2 1 1 1 2 0.9 0.02 11 0 0 11 5 9 14 5 6 71.42 25.68 71.65 5 2 3 Whitelist HNSC-US 0.77 0.09 0 0 0.92 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 12 0.02 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 6 104404208 150042268 1 2 360 2 0 0 0 0 0.11 0.01 4 0 0 4 4 4 11 7 7 71.42 96.58 0.16 1 2 3 Whitelist HNSC-US 0.54 0.06 0 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 7 3447162 4216408 2 2 360 2 0 0 0 0 0.11 0.29 4 0 0 4 3 4 16 9 11 71.42 99.78 0 0 4 3 Whitelist HNSC-US 0.54 0.54 0 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 8 74369482 141891977 1 19 360 5 0 0 1 13 0.01 0.19 20 0 0 20 6 6 25 7 9 71.42 96.58 0 6 5 4 Whitelist HNSC-US 3 0.54 0.4 0 0 0.19 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 25 0.03 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 9 21964413 22003625 2 2 360 0 0 1 1 0 0.57 0.03 1 0 0 NA NA NA 9 4 9 71.42 67.27 32.52 0 2 NA Whitelist HNSC-US 0.68 0.11 0 0 0.64 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 10 55274521 114555716 1 10 360 2 0 0 0 8 0.11 0.45 7 0 0 7 3 5 11 4 4 71.42 80.21 16.37 3 3 1 Whitelist HNSC-US 11_3 0.62 0.69 0 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 12 0.02 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 11 14499146 103309486 1 21 360 2 2 1 1 15 0.88 0 26 0 0 26 6 6 29 6 7 71.42 76.54 23.03 2 3 4 Whitelist HNSC-US 3 0.68 0.01 0 0 0.91 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 27 0.04 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 12 24589172 91404195 1 13 360 1 3 0 0 9 0.11 0.21 9 0 0 9 4 5 11 4 4 71.42 99.98 0 2 3 4 Whitelist HNSC-US 11_2_8 0.9 0.44 0 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 17 0.02 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 13 23282606 67973871 1 2 360 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA 4 3 3 71.42 29.12 70.88 2 2 1 Whitelist HNSC-US 0.54 0.02 NA 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 14 85054046 87030742 2 2 360 0 0 1 1 0 0.57 0.88 4 0 0 4 4 4 10 7 7 71.42 99.09 0 0 4 5 Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 15 40286079 40357293 2 2 360 0 2 0 0 0 0.11 0.87 3 0 0 NA NA NA 8 3 3 71.42 99.82 0.05 0 3 4 Whitelist HNSC-US 0.54 1 0 0 0.48 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 16 2272983 68229683 1 3 360 3 0 0 0 0 0.03 0.07 7 0.11 0.02 7 4 5 9 5 6 71.42 80.1 14.93 4 2 3 Whitelist HNSC-US 0.41 0.21 0.11 0.02 0.33 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 6 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 17 38386200 38533382 8 8 360 1 2 2 3 0 0.8 0.05 8 0 0 8 3 3 21 5 9 71.42 68.77 26.01 0 3 4 Whitelist HNSC-US 0.87 0.16 0 0 0.84 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 16 0.02 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 18 1261751 15359143 22 23 360 6 8 4 4 1 0.57 0 37 0 0 37 8 32 40 8 8 71.42 19.29 80.68 0 4 3 Whitelist HNSC-US 0.68 0 0 0 0.64 0 High confidence HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC With other complex events 45 0.06 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 19 13930787 14015715 2 2 360 0 0 1 1 0 0.57 0.34 4 0 0 4 4 4 6 5 5 71.42 99.83 0 0 4 5 Whitelist HNSC-US 0.68 0.59 0 0 0.64 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 4 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 20 13072480 36586202 1 3 360 2 1 0 0 0 0.3 1 7 0 0 7 4 7 8 4 4 71.42 92.24 0.56 2 4 3 Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 6 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 21 17104936 32837950 1 3 360 2 1 0 0 0 0.3 0.81 6 0 0 6 4 6 7 5 5 71.42 0.4 76.95 0 2 1 Whitelist HNSC-US 0.62 0.95 0 0 0.59 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 6 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 22 19715951 51129703 68 68 360 18 15 19 16 0 0.9 0 61 0 0 61 6 8 62 6 8 71.42 41.24 58.51 16 3 4 Whitelist HNSC-US 0.93 0 0 0 0.92 0 Low confidence HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC With other complex events 136 0.19 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 X 1694081 44835491 1 4 360 4 0 0 0 0 0.01 0.15 1 0 0 NA NA NA 6 6 6 71.42 53.13 46.87 0 1 NA Whitelist HNSC-US 0.21 0.35 0 0 0.16 0 No HNSC-US ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 HNSC 0.65 3.12 Head-SCC NA 8 0.01 frameshift_deletion,17_7577062_-_T,CN:2 3 HNSC-US DO15046 TCGA-CX-7086 ad6c9d09-2c03-4786-a72d-dd2aa5f603d4 male alive C04.9 53 NA 237 NA Included Head-SCC HNSC US 0 7.8 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 1 154085862 162140435 2 4 54 1 1 0 0 2 0.57 0.32 1 0 0 NA NA NA NA NA NA 17.44 1.53 98.47 0 2 NA Whitelist HNSC-US 0.62 0.57 0 0 0.64 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 6 0.06 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 2 NA NA 0 0 54 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.95 NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 3 21975658 86397707 1 1 54 1 0 0 0 0 0.39 0.28 2 0 NA NA NA NA 5 3 4 17.44 95.37 4.46 0 1 3 Whitelist HNSC-US 0.62 0.52 0 NA 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 4 NA NA 0 0 54 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.81 NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 5 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 6 144699830 144748886 1 1 54 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 17.44 22.66 77.19 5 2 NA Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 7 NA NA 0 0 54 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.62 NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 8 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 9 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 10 57194896 111618916 5 5 54 2 1 1 1 0 0.9 0.04 3 0 0 NA NA NA NA NA NA 17.44 9.54 90.28 2 2 1 Whitelist HNSC-US 0.93 0.13 0 0 0.92 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 10 0.09 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 11 64009817 123742973 1 2 54 2 0 0 0 0 0.11 0.04 3 0 0 NA NA NA NA NA NA 17.44 18.69 80.88 3 2 1 Whitelist HNSC-US 0.54 0.14 0 0 0.48 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 4 0.04 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 12 11634176 82639985 4 11 54 1 1 1 1 7 1 0 3 0 0 NA NA NA NA NA NA 17.44 0.95 98.97 8 2 1 Whitelist HNSC-US 0.98 0 0 0 1 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 15 0.14 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 13 21168790 21196794 1 1 54 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.44 0 100 0 2 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 14 81725539 105936759 1 1 54 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.44 22.55 76.53 0 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 15 44920783 45183837 1 1 54 0 0 1 0 0 0.39 0 1 0 NA NA NA NA 7 7 7 17.44 4.6 95.28 0 1 NA Whitelist HNSC-US 0.62 0 0 NA 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 16 NA NA 0 0 54 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.86 NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 17 30133009 57923417 1 6 54 0 0 0 1 5 0.39 0 4 0 0 4 4 4 7 7 7 17.44 2.61 97.37 1 1 2 Whitelist HNSC-US 0.93 0 0 0 0.59 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 7 0.06 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 18 NA NA 0 0 54 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0 0 NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 19 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 20 NA NA 0 0 54 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a 22 NA NA 0 0 54 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist HNSC-US NA 0 0 NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::ba9d4568-71a8-41fc-a2be-0bf784e36d6a X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US ba9d4568-71a8-41fc-a2be-0bf784e36d6a HNSC 0.8 1.95 Head-SCC NA 0 0 NA 2 HNSC-US DO14296 TCGA-CR-6480 ba9d4568-71a8-41fc-a2be-0bf784e36d6a male alive C09.9 53 NA 362 NA Included Head-SCC HNSC US 0 11.91 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 1 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 2 159246220 159498913 2 2 36 0 0 1 1 0 0.57 0.12 1 0 0 NA NA NA 5 5 5 26.97 0.09 99.8 0 2 NA Whitelist HNSC-US 0.68 0.3 0 0 0.64 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 4 0.06 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 3 96844915 97168392 1 1 36 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 4 3 3 26.97 41.2 58.68 0 1 2 Whitelist HNSC-US 0.62 0.27 0 NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 4 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 5 23031625 37116479 1 2 36 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 26.97 0.08 99.78 0 2 1 Whitelist HNSC-US 0.54 1 NA 0 0.48 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 4 0.06 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 6 67562015 128725399 1 3 36 3 0 0 0 0 0.03 0.48 3 0 0 NA NA NA NA NA NA 26.97 0.02 99.8 0 2 1 Whitelist HNSC-US 0.41 0.72 0 0 0.33 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 6 0.08 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 7 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 8 135493989 135634954 1 1 36 1 0 0 0 0 0.39 0.11 2 NA NA NA NA NA NA NA NA 26.97 0.1 99.9 0 1 2 Whitelist HNSC-US 0.62 0.28 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 9 102601063 103149591 4 4 36 0 3 0 1 0 0.11 0.05 6 0 0 6 3 4 7 3 4 26.97 0.39 98.87 0 4 1 Whitelist HNSC-US 0.54 0.17 0 0 0.48 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 8 0.11 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 11 85399360 88404323 1 1 36 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA 4 3 3 26.97 49.96 49.62 0 0 1 Whitelist HNSC-US 0.62 0.47 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 12 26264171 50009942 1 1 36 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 26.97 81.06 18.86 0 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 14 103208338 103352021 1 1 36 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA NA NA NA 26.97 99.09 0 0 0 1 Whitelist HNSC-US 0.62 0.1 0 NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 15 101384702 101489849 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.97 0.1 99.9 0 2 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 17 NA NA 0 0 36 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.21 NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 19 14803409 23242426 1 1 36 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 26.97 3.32 87.91 0 2 3 Whitelist HNSC-US 0.62 0.12 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 21 17807451 17824258 1 1 36 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 26.97 0 77.35 0 2 NA Whitelist HNSC-US 0.62 0.61 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 22 NA NA 0 0 36 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.6 NA NA NA 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 0 0 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bd75d8ee-916b-4abc-bf33-bce6a4217076 X 88397311 88417710 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.97 100 0 0 0 1 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US bd75d8ee-916b-4abc-bf33-bce6a4217076 HNSC 0.84 1.8 Head-SCC NA 2 0.03 NA 1 HNSC-US DO52029 TCGA-BA-A4IH bd75d8ee-916b-4abc-bf33-bce6a4217076 male alive C10.9 57 NA 201 NA Included Head-SCC HNSC US 0 6.61 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 1 16447803 98017141 1 2 85 2 0 0 0 0 0.11 0.69 4 0 0 4 3 4 9 3 8 85.95 99.92 0.08 0 4 2 Whitelist HNSC-US 0.54 0.89 0 0 0.48 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 4 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 2 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 3 158629631 166439926 14 14 85 4 2 3 5 0 0.7 0 12 0 0 12 3 3 31 4 4 85.95 96.94 0 1 1 5 Whitelist HNSC-US 0.81 0 0 0 0.78 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 28 0.16 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 4 62932556 160719918 1 2 85 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 6 5 5 85.95 97.43 0.02 0 2 3 Whitelist HNSC-US 0.54 0.32 NA 0 0.48 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 4 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 5 41146857 59449999 1 2 85 2 0 0 0 0 0.11 0.82 3 0 0 NA NA NA 9 6 6 85.95 99.87 0 0 3 5 Whitelist HNSC-US 0.54 0.96 0 0 0.48 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 4 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 6 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 7 NA NA 0 0 85 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.25 NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 8 71842382 72200173 1 1 85 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 85.95 67.25 29.33 0 5 6 Whitelist HNSC-US 0.62 0.33 NA NA 0.59 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 9 102889625 117865627 1 2 85 1 1 0 0 0 0.57 0.78 4 NA 0 4 3 4 5 3 3 85.95 99.84 0 0 4 3 Whitelist HNSC-US 0.68 0.93 NA 0 0.64 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 4 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 10 34649680 34733002 1 1 85 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 3 85.95 68.7 27.91 0 0 2 Whitelist HNSC-US 0.62 0.41 NA NA 0.59 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 11 35887768 69692691 1 4 85 1 0 1 0 2 0.57 0.12 12 0 0 12 3 4 13 3 4 85.95 88.68 7.25 0 3 5 Whitelist HNSC-US 0.68 0.3 0 0 0.64 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 6 0.04 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 12 4214698 11566352 1 2 85 0 2 0 0 0 0.11 0.12 3 0 0 NA NA NA 11 3 3 85.95 96.32 0 0 3 7 Whitelist HNSC-US 0.54 0.31 0 0 0.48 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 4 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 13 19632843 39676064 1 1 85 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 4 4 85.95 97.11 0 0 3 4 Whitelist HNSC-US 0.62 0.63 NA NA 0.59 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 14 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 15 100024074 100654713 2 3 85 1 0 0 1 1 0.57 0 5 0 0 5 3 5 13 6 6 85.95 95.22 0 0 12 5 Whitelist HNSC-US 0.87 0.01 0 0 0.64 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 5 0.03 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 16 NA NA 0 0 85 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.91 NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 17 57808148 57889600 1 1 85 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 85.95 99.98 0 0 4 NA Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 18 NA NA 0 0 85 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.54 NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 19 NA NA 0 0 85 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 10 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.47 NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 20 24698827 25285886 1 4 85 1 1 1 1 0 1 0 8 0 0 8 3 5 10 3 3 85.95 59.59 39.43 0 2 3 Whitelist HNSC-US 1 0.01 0 0 1 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 8 0.05 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 21 47866089 47881138 1 1 85 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 85.95 76.84 0 0 6 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 22 23240771 51215761 5 8 85 1 2 1 1 3 0.9 0 14 0 0 14 3 4 21 3 3 85.95 96.62 3.2 0 3 7 Whitelist HNSC-US 0.62 0 0 0 0.92 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 13 0.08 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 X NA NA 0 0 85 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.32 NA NA NA 0 No HNSC-US bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 HNSC 0.42 3.62 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:4 3 HNSC-US DO14242 TCGA-BA-6873 bf6b931e-cb2e-4cc0-b603-e9fc71fdc509 male alive C02.9 28 NA 113 NA Included Head-SCC HNSC US 0 3.72 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 1 22744462 211294614 6 6 61 3 1 1 1 0 0.57 0 20 0 0 20 11 11 27 11 17 86.9 99.66 0.3 2 3 1 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 12 0.1 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 False positive; manually removed HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 2 3599212 224480265 2 3 61 1 0 0 1 1 0.57 0.17 7 0 0 7 7 7 9 8 9 86.9 95.99 3.91 3 3 2 Whitelist HNSC-US 0.62 0.38 0 0 0.64 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 5 0.04 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 3 102376074 133844206 1 2 61 2 0 0 0 0 0.11 0.44 3 NA 0 NA NA NA NA NA NA 86.9 99.95 0 0 4 3 Whitelist HNSC-US 0.54 0.69 NA 0 0.48 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 4 0.03 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 4 165650224 180855551 1 6 61 4 0 0 0 2 0.01 0.02 8 0 0 8 5 8 11 5 5 86.9 99.75 0.24 0 3 2 Whitelist HNSC-US 0.25 0.08 0 0 0.16 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 10 0.08 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 5 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 6 11766748 31320329 2 2 61 0 0 1 1 0 0.57 1 4 0.46 0 4 4 4 5 5 5 86.9 0.33 99.44 0 1 2 Whitelist HNSC-US 0.68 1 0.46 0 0.64 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 4 0.03 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 7 37138647 150334316 1 2 61 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 86.9 98.8 0.95 0 2 3 Whitelist HNSC-US 0.54 0.93 NA 0 0.48 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 4 0.03 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 8 NA NA 0 0 61 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.93 NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 9 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 10 44707955 135233058 1 2 61 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 86.9 99.79 0.03 1 2 3 Whitelist HNSC-US 0.54 1 NA 0 0.48 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 4 0.03 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 11 47091442 61017070 3 6 61 2 0 2 2 0 0.57 0 11 0 0 11 5 7 18 9 9 86.9 96.19 0 1 5 6 Whitelist HNSC-US 0.68 0 0 0 0.64 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 12 0.1 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 12 103877186 103933807 1 1 61 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 86.9 99.92 0 0 4 5 Whitelist HNSC-US 0.62 0.62 NA NA 0.59 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 2 0.02 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 13 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 14 103229145 103246275 1 1 61 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 6 3 5 86.9 76.72 22.37 0 1 2 Whitelist HNSC-US 0.62 0.31 NA NA 0.59 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 2 0.02 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 15 48933264 52671044 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.9 96.23 3.65 0 2 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 2 0.02 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 16 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 17 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 18 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 19 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 20 NA NA 0 0 61 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.63 NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 0 0 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c1f50a22-38df-41cc-a1f4-f7985504a7ac X 452229 141145396 1 3 61 3 0 0 0 0 0.03 1 4 0.03 0 4 3 4 5 3 5 86.9 93.41 3.14 1 1 2 Whitelist HNSC-US 0.41 1 0.03 0 0.33 0 No HNSC-US c1f50a22-38df-41cc-a1f4-f7985504a7ac HNSC 0.7 3.36 Head-SCC NA 6 0.05 NA 4 HNSC-US DO14264 TCGA-BB-4225 c1f50a22-38df-41cc-a1f4-f7985504a7ac male alive C01 73 NA 140 NA Included Head-SCC HNSC US 0 4.61 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 1 NA NA 0 0 30 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 2 229053055 232647443 2 2 30 0 0 1 1 0 0.57 0.74 1 0 0 NA NA NA NA NA NA 4.71 0 99.9 0 2 NA Whitelist HNSC-US 0.68 0.91 0 0 0.64 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 4 0.07 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 3 180619763 193986135 2 2 30 0 0 1 1 0 0.57 0.06 3 0 0 NA NA NA 6 3 4 4.71 37.82 62.13 0 7 5 Whitelist HNSC-US 0.68 0.18 0 0 0.64 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 4 0.07 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 4 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 6 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 7 107467865 158826745 9 10 30 1 1 4 3 1 0.39 0 1 0 0 NA NA NA NA NA NA 4.71 0 99.78 0 2 NA Whitelist HNSC-US 0.68 0 0 0 0.59 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 19 0.32 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 9 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 11 59599650 65618358 1 4 30 2 1 0 0 1 0.3 0.01 1 0 0 NA NA NA NA NA NA 4.71 50.38 49.18 0 2 NA Whitelist HNSC-US 0.68 0.05 0 0 0.59 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 7 0.12 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 12 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 13 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 14 NA NA 0 0 30 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.48 NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 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NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::c7df3466-b9a7-4818-883b-d0cd08483570 X NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US c7df3466-b9a7-4818-883b-d0cd08483570 HNSC 0.58 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14582 TCGA-CR-5249 c7df3466-b9a7-4818-883b-d0cd08483570 female alive C09.9 35 NA 1152 NA Included Head-SCC HNSC US 0 37.89 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 1 101061175 192621913 1 2 96 2 0 0 0 0 0.11 0.09 6 0 0 6 4 6 8 4 4 72.57 59.06 37.94 0 1 2 Whitelist HNSC-US 0.54 0.25 0 0 0.48 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 4 0.02 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 2 14443978 187564452 1 4 96 3 1 0 0 0 0.11 0.36 6 0 0 6 3 6 7 3 3 72.57 99.77 0.12 2 3 2 Whitelist HNSC-US 0.54 0.61 0 0 0.48 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 8 0.04 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 3 60300560 191044283 1 6 96 4 2 0 0 0 0.06 1 5 0 0 5 3 5 6 3 3 72.57 52.61 44.31 0 4 1 Whitelist HNSC-US 0.54 1 0 0 0.48 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 12 0.06 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 4 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA 1 0 NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 5 301373 56638638 8 9 96 1 2 3 2 1 0.8 0 20 0 0 20 13 13 28 13 13 72.57 92.97 4.35 0 3 4 Whitelist HNSC-US 0.85 0 0 0 0.84 1 High confidence HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC After polyploidization 17 0.09 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 6 720079 25769089 6 6 96 0 1 3 2 0 0.34 0.02 13 0 0 13 6 7 21 6 8 72.57 98.77 0.96 1 4 5 Whitelist HNSC-US 0.62 0.06 0 0 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 12 0.06 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 7 90022488 110789062 1 9 96 5 0 1 1 2 0.04 0 8 0 0 8 8 8 14 9 9 72.57 96.73 0.53 0 2 3 Whitelist HNSC-US 8 0.48 0.01 0 0 0.38 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 16 0.08 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 8 3342972 4079826 1 5 96 5 0 0 0 0 0 0.06 10 0.05 0 10 5 10 12 5 5 72.57 67.62 28.96 0 1 0 Whitelist HNSC-US 0.1 0.19 0.05 0 0.07 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 10 0.05 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 9 9825246 9994579 1 1 96 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 8 3 4 72.57 70.56 28.74 0 1 2 Whitelist HNSC-US 0.62 0.68 0 NA 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 2 0.01 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 10 67417828 67579950 1 1 96 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 72.57 99.72 0.12 0 2 3 Whitelist HNSC-US 0.62 0.33 NA NA 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 2 0.01 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 11 30197577 112872155 1 6 96 2 0 1 1 2 0.57 0 20 0 0 20 5 6 23 8 9 72.57 47.01 49.07 0 2 7 Whitelist HNSC-US 0.62 0.01 0 0 0.64 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 10 0.05 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 12 105184966 105234406 3 3 96 0 1 1 1 0 0.8 0.81 2 0 0 NA NA NA 4 3 3 72.57 71.46 24.8 0 3 4 Whitelist HNSC-US 0.87 0.95 0 0 0.84 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 6 0.03 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 13 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 14 NA NA 0 0 96 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.63 NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 15 33226609 33275488 1 1 96 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 72.57 99.95 0.05 0 2 3 Whitelist HNSC-US 0.62 0.76 NA NA 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 2 0.01 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 16 NA NA 0 0 96 0 0 0 0 0 NA 0.74 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.91 0 NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 17 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 18 54410415 54468808 1 1 96 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 72.57 69.43 30.54 0 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 2 0.01 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 19 18541745 21434421 1 1 96 0 1 0 0 0 0.39 0.44 3 NA NA NA NA NA 9 3 3 72.57 68.5 31.32 0 3 4 Whitelist HNSC-US 0.62 0.69 NA NA 0.59 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 2 0.01 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cb99fb14-641c-4fb3-bf1d-17efb8cd982a X NA NA 0 0 96 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.48 NA NA NA 1 No HNSC-US cb99fb14-641c-4fb3-bf1d-17efb8cd982a HNSC 0.52 2.94 Head-SCC NA 0 0 NA 3 HNSC-US DO14862 TCGA-BA-5149 cb99fb14-641c-4fb3-bf1d-17efb8cd982a male alive C04.9 47 NA 248 NA Included Head-SCC HNSC US 0 8.16 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 1 170802032 246801107 1 2 39 1 1 0 0 0 0.57 0.23 2 0 0 NA NA NA 4 3 3 22.11 8.02 91.97 0 2 3 Whitelist HNSC-US 0.68 0.46 0 0 0.64 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 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1.96 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 5 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 6 136932092 137282495 1 2 39 1 0 0 0 1 0.39 0.08 2 0 NA NA NA NA NA NA NA 22.11 0.2 99.65 0 1 2 Whitelist HNSC-US 0.68 0.23 0 NA 0.59 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 3 0.04 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 8 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 9 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 10 67792307 68487531 2 2 39 0 1 1 0 0 0.57 0.01 4 0 0 4 3 4 9 4 6 22.11 49.64 50.19 0 2 1 Whitelist HNSC-US 0.68 0.04 0 0 0.64 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 11 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 12 19289227 57950829 1 4 39 0 0 1 0 3 0.39 0.03 1 0 0 NA NA NA NA NA NA 22.11 0 99.92 0 2 NA Whitelist HNSC-US 0.68 0.12 0 0 0.59 0 No HNSC-US 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0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 16 57021668 57829127 1 1 39 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 22.11 45.64 54.25 0 1 2 Whitelist HNSC-US 0.62 0.02 0 NA 0.59 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 17 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 18 62648737 62666241 1 2 39 0 1 0 0 1 0.39 0.28 1 NA NA NA NA NA NA NA NA 22.11 19.76 80.2 0 3 NA Whitelist HNSC-US 0.68 0.52 NA NA 0.59 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 3 0.04 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist 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HNSC-US::cd032ddb-55f2-4c77-8dcf-e4e630f7de6f X NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US cd032ddb-55f2-4c77-8dcf-e4e630f7de6f HNSC 0.5 1.96 Head-SCC NA 0 0 NA 2 HNSC-US DO14686 TCGA-CR-6470 cd032ddb-55f2-4c77-8dcf-e4e630f7de6f male alive C09.9 38 NA 1521 NA Included Head-SCC HNSC US 0 50.03 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 1 79937738 191394468 1 6 79 1 4 0 0 1 0.04 0.4 11 0 0 11 6 7 11 6 6 38.46 9.52 90.47 3 2 3 Whitelist HNSC-US 0.54 0.65 0 0 0.36 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 11 0.07 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 2 NA NA 0 0 79 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.2 NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 3 NA NA 0 0 79 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 1 0 NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 4 121279177 161776971 4 10 79 1 4 2 1 2 0.39 0 7 0 0 7 4 5 12 9 10 38.46 69.44 30.55 3 1 2 Whitelist HNSC-US 0.68 0 0 0 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 18 0.11 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 5 3846870 3920797 4 4 79 2 2 0 0 0 0.26 0 5 0 0 5 5 5 15 5 5 38.46 90.99 6.34 2 4 19 Whitelist HNSC-US 0.62 0.02 0 0 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 8 0.05 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 6 NA NA 0 0 79 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.84 NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 7 NA NA 0 0 79 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 0 NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 8 98018093 98964631 1 1 79 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 4 38.46 67.14 29.44 1 1 3 Whitelist HNSC-US 0.62 0.41 NA NA 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 9 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 10 8336606 8411737 1 1 79 0 0 0 1 0 0.39 0.18 2 0 NA NA NA NA 6 0 0 38.46 76.27 20.22 0 3 4 Whitelist HNSC-US 0.62 0.4 0 NA 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 11 4894603 73135877 1 4 79 2 1 1 0 0 0.57 0.42 6 0 0 6 6 6 7 7 7 38.46 74.14 25.43 6 1 2 Whitelist HNSC-US 0.68 0.67 0 0 0.64 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 8 0.05 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 12 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 13 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 15 32113982 32318544 1 1 79 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 38.46 0.13 99.74 0 2 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 16 7980426 19544200 1 2 79 0 2 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 38.46 0.07 99.92 0 2 3 Whitelist HNSC-US 0.54 1 NA 0 0.48 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 4 0.03 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 17 5397736 63266923 1 7 79 1 1 0 1 4 0.8 0 6 0 0 6 3 5 11 3 5 38.46 27.34 72.65 7 7 1 Whitelist HNSC-US 0.77 0 0 0 0.84 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 10 0.06 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 18 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 19 43757202 45355961 1 9 79 0 1 1 1 6 0.8 0 11 0 0 11 0 3 13 0 0 38.46 19.95 79.87 0 32 2 Whitelist HNSC-US 0.68 0 0 0 0.84 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 12 0.08 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 20 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 21 21639511 21718400 1 1 79 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 38.46 0.16 77.19 0 1 2 Whitelist HNSC-US 0.62 0.21 NA NA 0.59 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 2 0.01 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d189a6c6-210f-4957-b500-457d5ce3f867 X NA NA 0 0 79 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.95 NA NA NA 0 No HNSC-US d189a6c6-210f-4957-b500-457d5ce3f867 HNSC 0.38 1.93 Head-SCC NA 0 0 NA 2 HNSC-US DO14420 TCGA-CR-7404 d189a6c6-210f-4957-b500-457d5ce3f867 male alive C09.9 53 NA 1472 NA Included Head-SCC HNSC US 0 48.42 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 1 113446523 121318765 1 1 40 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 72.68 96.95 0 0 1 3 Whitelist HNSC-US 0.62 0.62 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 2 206153776 206429454 1 1 40 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 72.68 97.32 0 0 3 NA Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 3 119739602 119756061 2 2 40 0 0 1 1 0 0.57 0.36 1 0 0 NA NA NA NA NA NA 72.68 52.49 44.34 0 4 NA Whitelist HNSC-US 0.68 0.62 0 0 0.64 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 4 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 4 56809700 64058423 1 1 40 0 1 0 0 0 0.39 1 3 NA 0 NA NA NA 4 0 3 72.68 33.5 66.49 0 2 3 Whitelist HNSC-US 0.62 1 NA 0 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 5 NA NA 0 0 40 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 6 125755535 125796998 1 1 40 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 8 5 6 72.68 97.18 0 0 3 4 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 7 1348566 54628260 1 4 40 2 2 0 0 0 0.26 0.02 6 0 0 6 5 6 13 5 5 72.68 97.31 0 1 5 4 Whitelist HNSC-US 0.62 0.08 0 0 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 8 0.1 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 8 5927045 6079252 1 1 40 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 72.68 99.89 0.1 0 2 4 Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 9 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 10 43042131 43230606 1 1 40 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 72.68 96.1 0 0 4 5 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 11 57558063 57580885 1 1 40 1 0 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 72.68 96.07 0 0 4 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 12 40991737 41049484 1 1 40 0 1 0 0 0 0.39 0.71 1 NA NA NA NA NA 4 3 4 72.68 95.98 0 0 4 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 13 NA NA 0 0 40 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 15 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0 0 NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 14 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 16 78897829 89253805 1 2 40 1 1 0 0 0 0.57 0.29 4 NA 0 4 3 4 6 3 4 72.68 94.87 0 0 5 3 Whitelist HNSC-US 0.68 0.54 NA 0 0.64 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 4 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 17 50933274 50998045 1 1 40 0 1 0 0 0 0.39 0.29 2 NA NA NA NA NA 5 4 4 72.68 68.22 27.34 0 4 5 Whitelist HNSC-US 0.62 0.54 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 18 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 19 24407119 27825374 1 1 40 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 72.68 99.83 0 0 3 NA Whitelist HNSC-US 0.62 0.78 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 20 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 21 NA NA 0 0 40 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.64 NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d2ca9a4d-c14c-40c0-871c-88794a02e4aa X 63423768 63438709 1 1 40 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 72.68 37.43 59.14 0 1 2 Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d2ca9a4d-c14c-40c0-871c-88794a02e4aa HNSC 0.24 3.21 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 HNSC-US DO14742 TCGA-CV-7180 d2ca9a4d-c14c-40c0-871c-88794a02e4aa male deceased C02.9 34 327 NA NA Included Head-SCC HNSC US 1 10.76 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 1 119113825 119319859 1 1 40 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 3 26.36 5.76 90.94 0 3 4 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 2 157999366 158114465 1 2 40 0 0 1 1 0 0.57 0.38 1 0 0 NA NA NA NA NA NA 26.36 16.8 83.08 0 2 NA Whitelist HNSC-US 0.68 0.63 0 0 0.64 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 3 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 4 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 5 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 6 56207031 56226832 1 1 40 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 26.36 0 99.85 0 2 NA Whitelist HNSC-US 0.62 0.76 NA NA 0.59 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 7 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 8 32902401 137265513 2 5 40 0 0 1 1 3 0.57 0 3 0 0 NA NA NA 7 5 5 26.36 99.86 0.01 0 3 4 Whitelist HNSC-US 0.93 0 0 0 0.64 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 7 0.09 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 9 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 10 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 11 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 12 NA NA 0 0 40 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 13 NA NA 0 0 40 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.65 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 14 103205198 103331002 1 1 40 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 4 3 3 26.36 5.17 93.92 0 0 1 Whitelist HNSC-US 0.62 0.13 NA NA 0.59 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 2 0.02 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 15 NA NA 0 0 40 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.03 0 NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 16 NA NA 0 0 40 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.25 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 17 NA NA 0 0 40 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.09 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 18 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 20 29886894 34385037 4 6 40 0 4 0 0 2 0.01 0 10 0 0 10 3 5 13 3 4 26.36 39.52 60.27 0 4 5 Whitelist HNSC-US 0.54 0 0 0 0.16 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 10 0.12 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba X NA NA 0 0 40 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba HNSC 0.71 2.08 Head-SCC NA 0 0 NA 2 HNSC-US DO14204 TCGA-CV-6433 d5eedfb5-4fa3-4a1e-ad0d-ea550b22a5ba male alive C02.9 57 NA 405 NA Included Head-SCC HNSC US 0 13.32 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 1 187904344 187984684 1 1 65 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 6 4 4 83.75 99.66 0.02 0 3 6 Whitelist HNSC-US 0.62 0.48 NA NA 0.59 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 2 0.02 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 2 6749252 242397154 1 2 65 2 0 0 0 0 0.11 0.17 6 NA 0.05 6 3 5 7 3 4 83.75 96.94 0.32 4 3 2 Whitelist HNSC-US 0.54 0.39 NA 0.05 0.48 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 3 9993017 114359308 1 2 65 1 1 0 0 0 0.57 0.46 5 0 0.04 5 3 5 6 3 6 83.75 96.87 0 21 5 6 Whitelist HNSC-US 0.68 0.7 0 0.04 0.64 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 4 NA NA 0 0 65 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.58 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 5 NA NA 0 0 65 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.69 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 6 33528181 33620980 1 1 65 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 83.75 99.83 0 1 4 NA Whitelist HNSC-US 0.62 0.69 NA NA 0.59 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 2 0.02 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 7 144096446 153248740 1 1 65 1 0 0 0 0 0.39 0.78 2 0 NA NA NA NA 9 5 7 83.75 99.77 0 2 1 3 Whitelist HNSC-US 0.62 0.93 0 NA 0.59 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 2 0.02 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 8 43438327 104261460 1 2 65 1 0 0 1 0 0.57 0.57 4 0 0 4 3 4 6 3 3 83.75 96.58 0 3 4 1 Whitelist HNSC-US 0.68 0.8 0 0 0.64 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 9 NA NA 0 0 65 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 10 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 11 45452741 61289808 2 2 65 0 1 0 1 0 0.57 0.55 5 0 0 5 0 4 8 5 7 83.75 6.11 90.12 0 2 3 Whitelist HNSC-US 0.68 0.77 0 0 0.64 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 12 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 13 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 14 45626664 45694726 1 1 65 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA 4 3 3 83.75 84.09 0 0 4 NA Whitelist HNSC-US 0.62 0.9 NA NA 0.59 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 2 0.02 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 15 NA NA 0 0 65 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 16 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 17 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 18 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 19 10580850 10692998 1 1 65 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 83.75 99.83 0 8 3 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 2 0.02 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 20 13445306 14976368 1 2 65 2 0 0 0 0 0.11 0.05 3 0 0 NA NA NA NA NA NA 83.75 99.02 0 1 5 4 Whitelist HNSC-US 0.54 0.17 0 0 0.48 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 21 19333993 28117905 2 2 65 0 0 1 1 0 0.57 0.19 1 NA 0 NA NA NA NA NA NA 83.75 77.35 0 1 3 NA Whitelist HNSC-US 0.68 0.41 NA 0 0.64 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 4 0.03 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 22 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 0 0 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d7641ca1-a062-4dd2-9414-447af7311a84 X 12009105 46643912 20 20 65 2 13 2 3 0 0 0 14 0 0 14 3 4 18 5 5 83.75 59.2 37.42 4 2 3 Whitelist HNSC-US 0.06 0 0 0 0.04 0 No HNSC-US d7641ca1-a062-4dd2-9414-447af7311a84 HNSC 0.4 3.62 Head-SCC NA 40 0.31 NA 3 HNSC-US DO15430 TCGA-CN-5374 d7641ca1-a062-4dd2-9414-447af7311a84 female alive C09.9 56 NA 290 NA Included Head-SCC HNSC US 0 9.54 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 1 49157656 49194008 1 1 317 0 1 0 0 0 0.39 0.17 2 0 NA NA NA NA 11 3 6 83.72 96.94 0 0 4 6 Whitelist HNSC-US 0.62 0.39 0 NA 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 2 0 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 2 48024778 84474307 4 6 317 1 0 1 2 2 0.57 0.07 22 0 0 22 4 6 37 5 7 83.72 97.29 0.03 1 5 7 Whitelist HNSC-US 0.93 0.2 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 10 0.02 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 3 67249412 88122081 10 16 317 2 3 2 3 6 0.94 0 26 0 0 26 3 6 39 3 6 83.72 96.85 0 10 5 8 Whitelist HNSC-US 0.87 0 0 0 0.96 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 26 0.04 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 4 167962485 185736204 4 6 317 1 0 1 2 2 0.57 0.21 7 0 0 7 4 7 20 4 13 83.72 88.24 9.3 2 2 3 Whitelist HNSC-US 0.93 0.44 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 10 0.02 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 5 33800481 44106277 7 7 317 1 2 1 3 0 0.67 0.35 11 0 0 11 3 4 27 3 5 83.72 87.42 9.92 0 9 7 Whitelist HNSC-US 0.77 0.61 0 0 0.74 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 14 0.02 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 6 63586290 64752601 2 7 317 0 1 0 1 5 0.57 0 5 0 0 5 0 3 27 3 3 83.72 97.17 0 1 8 9 Whitelist HNSC-US 0.54 0 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 9 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 7 49402719 120741906 1 3 317 0 1 1 0 1 0.57 0.08 8 0 0 8 3 7 16 4 7 83.72 97.45 0 2 8 10 Whitelist HNSC-US 0.87 0.23 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 5 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 8 30978892 40899908 1 5 317 1 0 0 2 2 0.3 0.02 5 0 0 5 0 3 7 0 3 83.72 96.42 0 0 4 5 Whitelist HNSC-US 0.68 0.08 0 0 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 8 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 9 32048683 32233162 2 2 317 1 0 0 1 0 0.57 0.77 4 0 0 4 0 3 20 3 3 83.72 80.05 19.25 0 13 17 Whitelist HNSC-US 0.68 0.93 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 4 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 10 39057404 42397111 1 2 317 1 0 0 0 1 0.39 0.04 2 0 0 NA NA NA 4 0 0 83.72 96.52 0.05 0 5 7 Whitelist HNSC-US 0.68 0.15 0 0 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 3 0 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 11 55074411 128586489 2 8 317 2 0 1 1 4 0.57 0.5 14 0 0 14 4 4 23 4 4 83.72 49.44 47.07 1 2 4 Whitelist HNSC-US 0.68 0.75 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 12 0.02 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 12 39664500 116679872 1 28 317 1 1 0 1 25 0.8 0 9 0 0 9 4 5 17 4 5 83.72 95.99 0 13 5 7 Whitelist HNSC-US 2 0.37 0 0 0 0.84 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 31 0.05 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 13 20499750 20521500 1 1 317 1 0 0 0 0 0.39 0.28 1 0 NA NA NA NA 8 3 3 83.72 97.22 0 0 3 NA Whitelist HNSC-US 0.62 0.52 0 NA 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 2 0 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 14 40048295 67691577 1 15 317 0 0 0 1 14 0.39 0 3 0 0 NA NA NA 8 3 4 83.72 84.09 0 0 10 9 Whitelist HNSC-US 0.93 0 0 0 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 16 0.03 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 15 24874089 81191132 1 5 317 1 0 1 1 2 0.8 0.86 6 0 0 6 0 3 10 4 4 83.72 100 0 0 5 7 Whitelist HNSC-US 0.93 1 0 0 0.84 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 8 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 16 49639408 57019377 2 5 317 1 0 1 0 3 0.57 0 3 0 0 NA NA NA 15 3 3 83.72 99.9 0 3 3 4 Whitelist HNSC-US 0.93 0 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 7 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 17 33134735 38151504 15 24 317 3 6 4 2 9 0.51 0 11 0 0 11 3 3 20 3 3 83.72 95.17 0 0 6 16 Whitelist HNSC-US 0.62 0 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 39 0.06 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 18 20892229 20988702 2 2 317 0 0 1 1 0 0.57 0.6 4 0 0 4 0 3 16 3 3 83.72 62.57 32.73 0 10 18 Whitelist HNSC-US 0.68 0.81 0 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 4 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 19 5393876 17333729 3 4 317 1 0 1 1 1 0.8 0.07 10 0 0 10 5 6 17 6 7 83.72 92.41 0 0 7 5 Whitelist HNSC-US 0.68 0.2 0 0 0.84 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 7 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 20 6063124 14046804 1 4 317 1 0 0 0 3 0.39 0.03 1 0 0 NA NA NA 5 4 4 83.72 92.81 0 0 5 NA Whitelist HNSC-US 0.21 0.11 0 0 0.59 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 5 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 21 21804726 25775382 5 8 317 2 1 1 1 3 0.9 0 17 0 0 17 3 4 21 3 5 83.72 77.35 0 0 9 7 Whitelist HNSC-US 0.54 0 0 0 0.92 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 13 0.02 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 22 26718240 31891029 1 2 317 0 0 1 1 0 0.57 0.6 5 NA 0 5 3 5 10 4 8 83.72 88.89 0 0 6 9 Whitelist HNSC-US 0.68 0.81 NA 0 0.64 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 4 0.01 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::d89b1fd6-bef4-4803-8ed3-3b442be600b6 X NA NA 0 0 317 0 0 0 0 0 NA 0.52 NA 0 NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist HNSC-US NA 0.76 0 NA NA 0 No HNSC-US d89b1fd6-bef4-4803-8ed3-3b442be600b6 HNSC 0.49 5.3 Head-SCC NA 0 0 NA 5 HNSC-US DO14343 TCGA-CV-5432 d89b1fd6-bef4-4803-8ed3-3b442be600b6 male alive C32.9 68 NA 3930 NA Included Head-SCC HNSC US 0 129.28 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 1 1362882 85717387 13 14 224 3 3 3 4 1 0.97 0.13 15 0 0 15 15 15 25 23 23 32.32 33.37 63.56 0 2 1 Whitelist HNSC-US 0.98 0.33 0 0 0.98 1 High confidence HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC Canonical without polyploidization 27 0.06 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 2 18835828 64562584 1 2 224 1 1 0 0 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 32.32 42.32 57.59 0 2 NA Whitelist HNSC-US 0.68 0.07 0 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 4 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 3 95736253 119010562 1 4 224 1 2 1 0 0 0.57 0.05 4 0 0 4 3 4 6 3 3 32.32 96.13 0.29 0 3 2 Whitelist HNSC-US 0.68 0.16 0 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 8 0.02 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 4 45128290 174160607 1 3 224 2 0 0 1 0 0.3 0 5 0 0 5 3 5 5 3 3 32.32 17.83 82.05 0 1 2 Whitelist HNSC-US 0.62 0.01 0 0 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 6 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 5 NA NA 0 0 224 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0 NA NA NA 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 0 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 6 7456827 7544842 1 1 224 0 1 0 0 0 0.39 0 1 0.01 NA NA NA NA NA NA NA 32.32 0 99.86 0 2 NA Whitelist HNSC-US 0.62 0.02 0.01 NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 7 127261422 141792419 1 4 224 2 0 1 0 1 0.3 0.18 6 0 0 6 4 4 7 5 5 32.32 14 85.78 0 1 2 Whitelist HNSC-US 0.68 0.4 0 0 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 7 0.02 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 8 69953987 70161814 2 2 224 0 1 1 0 0 0.57 0.03 1 0 0 NA NA NA 8 4 4 32.32 82.51 13.81 0 2 NA Whitelist HNSC-US 0.68 0.11 0 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 4 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 9 78513896 138989907 1 7 224 0 1 1 1 4 0.8 1 2 0 0 NA NA NA NA NA NA 32.32 55.03 44.84 0 1 2 Whitelist HNSC-US 0.68 1 0 0 0.84 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 10 0.02 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 10 50413265 89643686 3 10 224 1 1 0 4 4 0.11 0 17 0 0 17 6 13 22 6 6 32.32 61.33 38.5 2 3 4 Whitelist HNSC-US 0.62 0 0 0 0.48 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 16 0.04 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 11 68346390 103142549 45 51 224 7 12 13 13 6 0.53 0 61 0 0 61 3 6 68 5 6 32.32 51.81 47.63 2 17 15 Whitelist HNSC-US 1 0.87 0 0 0 0.64 1 Linked to high confidence HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC With other complex events 96 0.21 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 12 38218200 79707008 1 14 224 2 0 0 2 10 0.26 0 16 0 0 16 5 10 18 5 5 32.32 10.22 86.04 20 1 2 Whitelist HNSC-US 0.81 0.01 0 0 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 18 0.04 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 13 40669495 101085905 1 1 224 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 3 32.32 54.26 45.74 0 1 2 Whitelist HNSC-US 0.62 0.26 NA NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 14 51744437 51857369 1 1 224 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 32.32 0 99.09 0 2 NA Whitelist HNSC-US 0.62 0.17 NA NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 15 93173304 93231387 2 2 224 0 0 1 1 0 0.57 0.01 8 0 0 8 3 4 22 3 3 32.32 53.55 46.36 1 22 4 Whitelist HNSC-US 0.68 0.03 0 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 4 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 16 4419626 4806876 1 1 224 1 0 0 0 0 0.39 0.54 2 0.12 NA NA NA NA NA NA NA 32.32 0.43 99.48 0 1 2 Whitelist HNSC-US 0.62 0.77 0.12 NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 17 37742882 38127865 2 2 224 0 1 1 0 0 0.57 0.02 5 0 0 5 0 3 17 4 4 32.32 37.56 57.97 0 1 4 Whitelist HNSC-US 0.68 0.09 0 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 4 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 18 NA NA 0 0 224 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist HNSC-US NA 0.54 NA NA NA 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 0 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 19 4653927 23159288 1 2 224 1 1 0 0 0 0.57 0.34 2 NA 0 NA NA NA NA NA NA 32.32 0.14 99.68 0 1 2 Whitelist HNSC-US 0.68 0.59 NA 0 0.64 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 4 0.01 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 20 NA NA 0 0 224 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 0 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 21 NA NA 0 0 224 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.61 NA NA NA 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 0 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e 22 19602267 19741467 1 1 224 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.32 0.27 99.73 0 2 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e303b8c4-6428-4134-bb9d-a95dc1d8e35e X 23143932 23176254 1 1 224 1 0 0 0 0 0.39 0.88 2 0 NA NA NA NA NA NA NA 32.32 0.02 99.31 0 1 2 Whitelist HNSC-US 0.62 1 0 NA 0.59 1 No HNSC-US e303b8c4-6428-4134-bb9d-a95dc1d8e35e HNSC 0.85 2 Head-SCC NA 2 0 stopgain,17_7579386_A_T,CN:1 2 HNSC-US DO14750 TCGA-CQ-6228 e303b8c4-6428-4134-bb9d-a95dc1d8e35e female deceased C14.8 71 456 NA NA Included Head-SCC HNSC US 1 15 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 1 6461728 246610222 1 7 149 1 3 1 0 2 0.28 0.54 5 0 0 5 3 4 7 4 4 59.86 100 0 53 3 4 Whitelist HNSC-US 0.77 0.77 0 0 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 12 0.04 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 2 133722658 200114733 1 10 149 8 0 0 1 1 0 0.1 23 0 0 23 6 6 26 8 8 59.86 41.48 55.82 18 2 3 Whitelist HNSC-US 0.01 0.27 0 0 0.02 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 19 0.06 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 3 194529547 197519861 7 7 149 2 0 2 3 0 0.44 0.08 13 0 0 13 10 13 23 10 16 59.86 36.45 63.41 1 3 4 Whitelist HNSC-US 0.68 0.22 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 14 0.05 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 False positive; manually removed HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 4 19329252 151910523 1 12 149 8 2 0 0 2 0 0.07 29 0 0 29 8 8 31 8 8 59.86 69.6 30.22 31 2 3 Whitelist HNSC-US 0.21 0.2 0 0 0.04 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 22 0.07 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 5 33480629 33517961 2 2 149 0 0 1 1 0 0.57 0.17 1 0 0 NA NA NA 11 3 5 59.86 67.7 29.62 26 7 NA Whitelist HNSC-US 0.68 0.39 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 4 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 6 78669828 101078509 1 2 149 1 1 0 0 0 0.57 0.04 6 0 0 6 4 6 7 5 5 59.86 99.8 0.06 8 3 4 Whitelist HNSC-US 0.68 0.13 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 4 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 7 65595737 110568307 1 10 149 1 1 0 1 7 0.8 0.04 9 0 0 9 3 4 18 5 7 59.86 54.8 42.78 30 2 4 Whitelist HNSC-US 4 0.3 0.14 0 0 0.84 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 13 0.04 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 8 105049668 105230601 1 1 149 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 59.86 0.12 99.74 0 0 2 Whitelist HNSC-US 0.62 0.13 NA NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 9 3875067 118012270 1 4 149 1 0 0 1 2 0.57 0.83 15 0 0 15 3 4 19 3 5 59.86 81.93 14.99 17 10 2 Whitelist HNSC-US 0.68 0.97 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 6 0.02 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 10 31752062 131659842 1 7 149 2 2 0 1 2 0.53 0.43 8 0 0 8 5 8 9 5 5 59.86 71.84 27.98 24 3 2 Whitelist HNSC-US 0.77 0.68 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 12 0.04 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 11 40440921 42479317 3 6 149 1 2 0 0 3 0.3 0 6 0 0 6 0 3 33 5 6 59.86 24.12 75.3 2 4 5 Whitelist HNSC-US 0.25 0 0 0 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 9 0.03 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 12 65753601 65818839 1 1 149 0 1 0 0 0 0.39 0.7 2 0 NA NA NA NA NA NA NA 59.86 99.92 0 2 3 5 Whitelist HNSC-US 0.62 0.89 0 NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 13 87042968 87076709 1 1 149 1 0 0 0 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 59.86 0 100 0 2 NA Whitelist HNSC-US 0.62 0.74 0 NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 14 35728273 43441377 1 2 149 1 1 0 0 0 0.57 0.81 4 0 0 4 0 3 6 3 4 59.86 59.62 37.51 0 3 1 Whitelist HNSC-US 0.68 0.96 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 4 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 15 26970615 76668572 1 6 149 1 3 0 0 2 0.11 0.31 6 0 0 6 5 6 7 5 5 59.86 99.85 0.05 11 3 4 Whitelist HNSC-US 0.54 0.56 0 0 0.48 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 10 0.03 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 16 22376869 73054908 1 2 149 1 1 0 0 0 0.57 0.8 1 NA 0 NA NA NA NA NA NA 59.86 99.9 0 7 3 NA Whitelist HNSC-US 0.68 0.95 NA 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 4 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 17 61192540 61249385 1 1 149 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 59.86 29.52 65.24 0 2 NA Whitelist HNSC-US 0.62 0.69 NA NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 18 13085172 31626286 2 2 149 0 1 1 0 0 0.57 0.8 3 0 0 NA NA NA NA NA NA 59.86 99.96 0 3 1 3 Whitelist HNSC-US 0.68 0.95 0 0 0.64 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 4 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 19 NA NA 0 0 149 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.63 NA NA NA 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 0 0 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 20 25612657 25931335 1 1 149 0 0 1 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 59.86 52.24 40.57 0 2 3 Whitelist HNSC-US 0.62 0.93 NA NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 21 17221380 20449570 1 1 149 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 6 4 6 59.86 64.79 13.02 0 2 4 Whitelist HNSC-US 0.62 0.68 NA NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 22 23638357 23687489 1 1 149 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 59.86 100 0 0 1 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 2 0.01 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e7d49212-e9cb-4cd7-923a-bdfc82a4a150 X 28304963 124151703 1 5 149 2 2 0 0 1 0.26 0.35 10 0 0 10 10 10 11 11 11 59.86 37.24 59.61 6 1 2 Whitelist HNSC-US 0.68 0.6 0 0 0.59 0 No HNSC-US e7d49212-e9cb-4cd7-923a-bdfc82a4a150 HNSC 0.7 2.78 Head-SCC NA 9 0.03 nonsynonymous_SNV;stopgain,17_7577106_A_G;17_7578234_T_-,CN:3 3 HNSC-US DO15791 TCGA-CN-6011 e7d49212-e9cb-4cd7-923a-bdfc82a4a150 male alive C03.9 57 NA 228 NA Included Head-SCC HNSC US 0 7.5 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 1 77084539 156266536 3 5 183 1 2 0 0 2 0.3 0.49 11 0 0 11 3 4 29 6 6 59.25 84.99 11.98 0 3 2 Whitelist HNSC-US 18 0.62 0.74 0 0 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 8 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 2 241445 134410075 1 11 183 2 4 0 0 5 0.06 0.5 17 0 0 17 5 7 21 5 7 59.25 77.41 22.48 0 3 4 Whitelist HNSC-US 0.62 0.75 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 17 0.05 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 3 84808293 99264319 3 4 183 0 2 1 0 1 0.3 0.47 4 0 0 4 3 4 26 4 9 59.25 46.06 53.81 0 3 2 Whitelist HNSC-US 0.54 0.71 0 0 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 7 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 4 25380913 157815635 1 8 183 3 3 0 0 2 0.11 0.66 15 0 0 15 7 7 18 10 10 59.25 73.29 24.17 0 4 2 Whitelist HNSC-US 0.62 0.86 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 14 0.04 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 5 52167571 52179753 1 1 183 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 10 3 3 59.25 25.49 71.83 0 0 2 Whitelist HNSC-US 0.62 0.08 NA NA 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 2 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 6 20283703 124107518 1 7 183 2 4 0 0 1 0.06 0.64 11 0 0 11 6 11 13 6 6 59.25 31.09 66.04 0 4 2 Whitelist HNSC-US 0.62 0.85 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 13 0.04 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 7 1981292 145607230 1 11 183 8 2 0 0 1 0 0.32 20 0 0 20 7 9 21 7 9 59.25 99.44 0.34 0 4 2 Whitelist HNSC-US 0.1 0.57 0 0 0.04 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 21 0.06 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 8 37889184 90144744 1 4 183 3 1 0 0 0 0.11 0.23 8 0 0 8 3 4 14 3 3 59.25 75.7 20.87 0 3 2 Whitelist HNSC-US 0.54 0.47 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 8 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 9 10068389 22091716 1 2 183 2 0 0 0 0 0.11 0.13 4 0 0 4 4 4 7 5 7 59.25 0.16 99.14 0 0 2 Whitelist HNSC-US 0.54 0.32 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 4 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 10 34578782 34791679 3 3 183 1 0 1 1 0 0.8 0.03 2 0 0 NA NA NA 13 3 3 59.25 96.24 0.31 0 2 3 Whitelist HNSC-US 0.87 0.11 0 0 0.84 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 6 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 11 68327228 102651890 4 6 183 2 2 0 0 2 0.26 0 16 0 0 16 4 5 35 4 5 59.25 16.22 80.16 0 2 14 Whitelist HNSC-US 0.68 0 0 0 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 10 0.03 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 12 1171612 66451373 1 13 183 1 3 1 2 6 0.67 0.03 10 0 0 10 4 8 11 4 6 59.25 96.17 0.15 1 4 6 Whitelist HNSC-US 0.54 0.12 0 0 0.74 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 20 0.05 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 13 NA NA 0 0 183 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.46 NA NA NA 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 0 0 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 14 70124748 84882918 3 5 183 1 1 1 0 2 0.8 0 6 0 0 6 3 6 22 7 7 59.25 98.97 0.11 0 4 6 Whitelist HNSC-US 0.62 0 0 0 0.84 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 8 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 15 63865386 63889805 1 1 183 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 59.25 99.88 0.02 0 2 4 Whitelist HNSC-US 0.62 0.74 NA NA 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 2 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 16 89310079 89586338 2 2 183 0 0 1 1 0 0.57 0.82 3 0 0 NA NA NA 11 7 7 59.25 65.27 33.78 0 2 3 Whitelist HNSC-US 0.68 0.96 0 0 0.64 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 4 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 17 15115982 59322480 1 3 183 0 2 0 0 1 0.11 0.82 6 0 0 6 3 4 8 3 3 59.25 93.14 2.43 0 4 5 Whitelist HNSC-US 0.62 0.96 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 5 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 18 32515939 66416185 1 7 183 1 3 0 0 3 0.11 0 16 0 0 16 5 6 20 5 7 59.25 86.14 9.06 0 1 7 Whitelist HNSC-US 0.62 0 0 0 0.48 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 11 0.03 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 19 NA NA 0 0 183 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.52 NA NA NA 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 0 0 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 20 NA NA 0 0 183 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.42 NA NA NA 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 0 0 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 21 17393829 18325005 3 3 183 2 1 0 0 0 0.3 0.03 3 0 0 NA NA NA 6 4 4 59.25 14.1 62.28 0 2 3 Whitelist HNSC-US 0.62 0.1 0 0 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 6 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 22 40934896 41242810 1 1 183 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 59.25 99.3 0 0 4 6 Whitelist HNSC-US 0.62 0.91 NA NA 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 2 0.01 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::e8ac39e6-377a-412c-b18d-f6c4fc654ec6 X 29270507 108013671 1 3 183 1 2 0 0 0 0.3 0.61 3 0 0 NA NA NA NA NA NA 59.25 0.66 99.34 0 2 4 Whitelist HNSC-US 0.62 0.82 0 0 0.59 0 No HNSC-US e8ac39e6-377a-412c-b18d-f6c4fc654ec6 HNSC 0.46 3.12 Head-SCC NA 6 0.02 NA 4 HNSC-US DO14614 TCGA-HD-7753 e8ac39e6-377a-412c-b18d-f6c4fc654ec6 male alive C10.9 62 NA 5 NA Included Head-SCC HNSC US 0 0.16 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 1 NA NA 0 0 37 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.62 NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 2 205294042 205570395 1 2 37 0 2 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 18.18 0 99.89 0 2 NA Whitelist HNSC-US 0.54 0.93 NA 0 0.48 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 3 116390918 116536589 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.18 0.07 99.88 1 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 4 87646705 161330180 1 2 37 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 6 4 4 18.18 14.49 85.49 0 2 1 Whitelist HNSC-US 0.68 1 NA 0 0.64 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 5 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 6 20877467 56779747 1 2 37 1 1 0 0 0 0.57 0.28 4 0 0 4 3 4 5 3 3 18.18 0.32 99.45 1 2 1 Whitelist HNSC-US 0.68 0.52 0 0 0.64 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 7 NA NA 0 0 37 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.9 NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 8 115441633 117255047 1 2 37 1 1 0 0 0 0.57 0.12 1 0 0 NA NA NA NA NA NA 18.18 99.99 0 2 3 NA Whitelist HNSC-US 0.68 0.3 0 0 0.64 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 9 21499564 120485644 1 3 37 1 2 0 0 0 0.3 0.18 6 0.01 0 6 3 5 7 3 5 18.18 47.34 51.96 0 2 3 Whitelist HNSC-US 0.62 0.39 0.01 0 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 6 0.08 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 11 61562811 129762151 2 2 37 0 0 1 1 0 0.57 0.25 1 0.01 0 NA NA NA 4 3 3 18.18 37.6 58.32 0 2 NA Whitelist HNSC-US 0.68 0.49 0.01 0 0.64 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 4 0.05 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 12 27255002 27756284 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.18 0.12 99.86 0 2 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 15 96475250 96513795 1 1 37 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.18 0.04 84.42 0 2 3 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 16 61431041 83845475 1 7 37 3 4 0 0 0 0.06 0 10 0 0 10 5 10 12 5 5 18.18 2.49 97.41 0 2 3 Whitelist HNSC-US 0.54 0 0 0 0.48 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 14 0.19 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 17 57780975 57916460 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.18 0.17 99.82 0 1 2 Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 2 0.03 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 20 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 0 0 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f030e410-2585-461e-ad23-9fdf026ac06c X 55275512 107513459 1 3 37 2 1 0 0 0 0.3 0.43 3 0 0 NA NA NA NA NA NA 18.18 99.98 0.02 0 1 2 Whitelist HNSC-US 0.62 0.68 0 0 0.59 0 No HNSC-US f030e410-2585-461e-ad23-9fdf026ac06c HNSC 0.21 2.07 Head-SCC NA 6 0.08 NA 2 HNSC-US DO14171 TCGA-CR-7382 f030e410-2585-461e-ad23-9fdf026ac06c male alive C02.9 49 NA 796 NA Included Head-SCC HNSC US 0 26.18 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 1 188611531 188626020 2 2 148 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 11 6 11 76.29 82.9 17.1 0 3 NA Whitelist HNSC-US 0.68 0.01 0 0 0.64 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 2 97272769 196021046 5 8 148 0 2 2 1 3 0.53 0 25 0 0 25 4 7 36 5 7 76.29 97.12 0 0 3 4 Whitelist HNSC-US 0.62 0.02 0 0 0.64 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 13 0.04 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 3 168701969 168919424 2 2 148 0 2 0 0 0 0.11 0.01 5 0 0 5 0 3 25 4 4 76.29 52.65 44.21 1 14 17 Whitelist HNSC-US 0.54 0.04 0 0 0.48 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 4 34403127 82311584 1 7 148 1 3 0 0 3 0.11 0 16 0 0 16 3 5 26 5 5 76.29 25.4 72.23 1 2 3 Whitelist HNSC-US 0.62 0.02 0 0 0.48 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 11 0.04 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 5 20444346 29819524 1 2 148 2 0 0 0 0 0.11 0.03 3 NA 0 NA NA NA 4 4 4 76.29 97.33 0 0 4 3 Whitelist HNSC-US 0.54 0.1 NA 0 0.48 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 6 37765251 37844349 2 2 148 0 0 1 1 0 0.57 0.73 3 0 0 NA NA NA 8 3 6 76.29 92.64 7.19 0 5 4 Whitelist HNSC-US 0.68 0.9 0 0 0.64 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 7 NA NA 0 0 148 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA 11 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.81 0 NA NA 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 0 0 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 8 64248850 64296762 1 1 148 0 1 0 0 0 0.39 0.71 2 0 NA NA NA NA 6 3 3 76.29 87.22 12.77 0 3 4 Whitelist HNSC-US 0.62 0.9 0 NA 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 2 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 9 21966929 22010064 1 1 148 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 76.29 63.46 33.43 0 0 2 Whitelist HNSC-US 0.62 0.12 NA NA 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 2 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 10 20073217 39008546 1 2 148 2 0 0 0 0 0.11 0.17 3 NA 0 NA NA NA 4 3 3 76.29 73.55 26.27 0 1 2 Whitelist HNSC-US 0.54 0.38 NA 0 0.48 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 11 41210098 70388057 1 3 148 1 0 1 1 0 0.8 0 13 0 0 13 0 4 21 0 3 76.29 32.67 63.84 1 4 3 Whitelist HNSC-US 0.87 0.01 0 0 0.84 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 6 0.02 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 12 NA NA 0 0 148 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.17 NA NA NA 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 0 0 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 13 63791059 74290307 1 3 148 0 3 0 0 0 0.03 0.04 5 0 0 5 3 5 7 3 5 76.29 100 0 0 4 5 Whitelist HNSC-US 0.41 0.13 0 0 0.33 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 6 0.02 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 14 50410764 50656002 1 2 148 0 0 1 1 0 0.57 0.81 5 0 0 5 3 5 9 3 3 76.29 84.09 0 0 4 7 Whitelist HNSC-US 0.68 0.96 0 0 0.64 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 15 97987052 98010748 1 1 148 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 76.29 99.84 0 0 3 NA Whitelist HNSC-US 0.62 0.69 NA NA 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 2 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 16 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 0 0 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 17 76449489 76464097 1 1 148 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA 5 3 3 76.29 95.57 0 0 4 8 Whitelist HNSC-US 0.62 0.42 NA NA 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 2 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 18 5937503 37577192 1 5 148 3 0 0 0 2 0.03 0.12 5 0 0 5 3 5 5 3 3 76.29 95.28 0.05 0 3 2 Whitelist HNSC-US 0.45 0.31 0 0 0.33 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 8 0.03 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 19 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 0 0 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 20 6374801 6414926 1 1 148 1 0 0 0 0 0.39 1 2 0.09 NA NA NA NA 8 0 5 76.29 92.36 0 0 3 5 Whitelist HNSC-US 0.62 1 0.09 NA 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 2 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 21 45782504 45935357 1 4 148 0 1 0 0 3 0.39 0 4 0 0 4 0 4 5 0 0 76.29 77.73 0 0 5 6 Whitelist HNSC-US 0.68 0.01 0 0 0.59 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 5 0.02 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 22 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA NA NA NA NA 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 0 0 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 X 33848868 57454925 1 2 148 1 0 1 0 0 0.57 1 2 0 0 NA NA NA NA NA NA 76.29 78.2 0 0 1 NA Whitelist HNSC-US 0.68 1 0 0 0.64 0 No HNSC-US f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 HNSC 0.32 3.47 Head-SCC NA 4 0.01 frameshift_insertion,17_7577516_A_-,CN:3 3 HNSC-US DO14814 TCGA-CN-6989 f33aa93f-b32d-4c4f-9a71-1e5ab69c6899 male alive C32.9 64 NA 178 NA Included Head-SCC HNSC US 0 5.86 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 1 115529257 177630021 1 2 131 1 1 0 0 0 0.57 0.33 2 0 0 NA NA NA NA NA NA 22.79 0.1 99.9 1 1 2 Whitelist HNSC-US 0.68 0.58 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 2 4714073 142431381 1 2 131 1 0 0 1 0 0.57 0.03 2 0 0 NA NA NA NA NA NA 22.79 0.01 99.88 3 1 2 Whitelist HNSC-US 0.68 0.1 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 3 NA NA 0 0 131 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist HNSC-US NA 0.13 0 NA NA 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 4 17839152 188899905 1 11 131 3 1 1 0 6 0.28 0.08 8 0 0 8 3 6 9 3 3 22.79 0.17 99.82 6 2 1 Whitelist HNSC-US 0.62 0.22 0 0 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 16 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 5 17898963 96831414 1 4 131 2 2 0 0 0 0.26 1 7 0 0 7 4 4 7 4 4 22.79 26.69 70.32 6 2 1 Whitelist HNSC-US 0.62 1 0 0 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 8 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 6 27846733 145047894 1 2 131 2 0 0 0 0 0.11 0.2 7 0 0 7 5 7 10 6 6 22.79 17.92 78.55 3 2 3 Whitelist HNSC-US 0.54 0.42 0 0 0.48 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 7 53335532 126793141 1 4 131 1 2 0 0 1 0.3 0.43 4 0 0 4 3 4 5 3 3 22.79 0.08 99.68 6 2 1 Whitelist HNSC-US 0.54 0.68 0 0 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 7 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 8 3583005 3809096 2 2 131 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 11 5 5 22.79 0.57 99.42 0 2 1 Whitelist HNSC-US 0.54 0.01 0 0 0.48 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 9 120992309 121009429 1 1 131 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 22.79 23.34 76.51 0 2 NA Whitelist HNSC-US 0.62 0.74 NA NA 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 10 27307344 27569241 1 1 131 0 1 0 0 0 0.39 0.05 2 0 NA NA NA NA 10 3 4 22.79 49.01 47.55 0 5 6 Whitelist HNSC-US 0.62 0.17 0 NA 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 11 9860252 65320389 1 3 131 1 1 0 0 1 0.57 1 3 0 0 NA NA NA 4 3 4 22.79 0.04 95.8 4 2 1 Whitelist HNSC-US 0.87 1 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 5 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 12 111913885 111969876 2 2 131 0 0 1 1 0 0.57 0.41 1 0 0 NA NA NA NA NA NA 22.79 0 99.92 0 2 NA Whitelist HNSC-US 0.68 0.65 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 13 NA NA 0 0 131 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.95 0 NA NA 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 14 89878057 89914981 1 2 131 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 5 5 5 22.79 0.39 98.7 1 2 3 Whitelist HNSC-US 0.68 0.02 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 15 NA NA 0 0 131 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist HNSC-US NA 0.94 0 NA NA 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 16 35145400 35186327 1 1 131 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 5 0 4 22.79 30.01 69.9 1 2 NA Whitelist HNSC-US 0.62 1 NA NA 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 17 17434951 17686299 2 2 131 0 0 1 1 0 0.57 0.17 2 0 0 NA NA NA NA NA NA 22.79 0.13 99.86 0 2 3 Whitelist HNSC-US 0.68 0.39 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 18 3719436 3740487 1 1 131 0 0 0 1 0 0.39 0.03 1 0 NA NA NA NA 9 3 3 22.79 67.45 27.85 0 9 NA Whitelist HNSC-US 0.62 0.1 0 NA 0.59 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 19 49753099 50110130 2 2 131 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 22.79 0.04 98.78 0 2 NA Whitelist HNSC-US 0.68 0.01 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 20 NA NA 0 0 131 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 0.77 NA NA NA 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 21 NA NA 0 0 131 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist HNSC-US NA 1 NA NA NA 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 22 28356842 28368058 2 2 131 1 1 0 0 0 0.57 0.07 1 0 0 NA NA NA NA NA NA 22.79 0 100 0 2 NA Whitelist HNSC-US 0.68 0.21 0 0 0.64 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 HNSC-US::fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 X 107744794 142488424 1 2 131 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 22.79 100 0 0 1 NA Whitelist HNSC-US 0.54 1 0 0 0.48 0 No HNSC-US fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 HNSC 0.66 1.98 Head-SCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577568_A_C;17_7578463_G_C,CN:2 2 HNSC-US DO14250 TCGA-BA-6869 fafd6f5b-1d76-4537-bd1c-e0bd7b4e2166 male alive C32.9 62 NA 244 NA Included Head-SCC HNSC US 0 8.03 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 20 NA NA 0 0 1 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.09 NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02979422-5149-4750-ad5f-483e0bec6ac5 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02979422-5149-4750-ad5f-483e0bec6ac5 KICH 0.82 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220335 TCGA-KL-8327 02979422-5149-4750-ad5f-483e0bec6ac5 female alive C64.9 46 NA 3553 NA Included Kidney-ChRCC KICH US 0 116.88 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.47 NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 4 164367131 164388988 1 1 3 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 26.03 0 99.99 0 2 NA Whitelist KICH-US 0.62 0.41 NA NA 0.59 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 17 NA NA 0 0 3 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.23 NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::02ec7a3a-2812-4a65-93cd-07bf655cc91b X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 02ec7a3a-2812-4a65-93cd-07bf655cc91b KICH 0.41 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220341 TCGA-KL-8333 02ec7a3a-2812-4a65-93cd-07bf655cc91b male alive C64.9 69 NA 2648 NA Included Kidney-ChRCC KICH US 0 87.11 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 7 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.02 NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.51 NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 11 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.49 NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 16 15904723 24095084 1 1 6 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 9.65 0 99.89 0 2 NA Whitelist KICH-US 0.62 0.35 NA NA 0.59 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 2 0.17 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 19 NA NA 0 0 6 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.29 NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::03f3dd32-e1d1-485b-a968-3f55798f4d46 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 03f3dd32-e1d1-485b-a968-3f55798f4d46 KICH 0.81 1.88 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220334 TCGA-KL-8326 03f3dd32-e1d1-485b-a968-3f55798f4d46 male alive C64.9 69 NA 3322 NA Included Kidney-ChRCC KICH US 0 109.28 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 7 15781224 123082815 2 2 4 1 1 0 0 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 38.1 0 99.77 0 2 NA Whitelist KICH-US 0.68 0.07 NA 0 0.64 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 4 0.5 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 14 80938294 81016734 1 1 4 0 1 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 38.1 0 99.08 0 2 NA Whitelist KICH-US 0.62 0.3 NA NA 0.59 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 22 40724871 40745780 1 1 4 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 38.1 0 100 0 2 NA Whitelist KICH-US 0.62 0.16 NA NA 0.59 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::04e9a63a-d742-488c-8564-bf9d79aa2091 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 04e9a63a-d742-488c-8564-bf9d79aa2091 KICH 0.85 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220509 TCGA-KN-8431 04e9a63a-d742-488c-8564-bf9d79aa2091 female alive C64.9 35 NA -2 NA Included Kidney-ChRCC KICH US 0 -0.07 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 2 212850768 213115204 1 1 5 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 36.65 99.89 0 0 0 1 Whitelist KICH-US 0.62 0.61 NA NA 0.59 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 2 0.2 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.55 NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 6 159042905 159157784 1 1 5 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 36.65 99.86 0 0 1 NA Whitelist KICH-US 0.62 0.12 NA NA 0.59 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 2 0.2 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 14 106091025 106134553 1 1 5 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 36.65 0 99.12 0 2 NA Whitelist KICH-US 0.62 0.35 NA NA 0.59 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 2 0.2 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 20 NA NA 0 0 5 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.27 NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef 22 NA NA 0 0 5 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.18 NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::151f07f5-1529-4fcd-912c-e55b2ff8abef X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 151f07f5-1529-4fcd-912c-e55b2ff8abef KICH 0.84 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220556 TCGA-KO-8407 151f07f5-1529-4fcd-912c-e55b2ff8abef male alive C64.9 42 NA 2820 NA Included Kidney-ChRCC KICH US 0 92.76 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 1 18919808 19005645 1 1 9 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 56.19 0.03 99.96 0 1 2 Whitelist KICH-US 0.62 0.76 NA NA 0.59 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 2 0.11 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 3 24174105 146526920 1 2 9 2 0 0 0 0 0.11 0.13 2 NA 0 NA NA NA NA NA NA 56.19 99.76 0.12 0 2 3 Whitelist KICH-US 0.54 0.32 NA 0 0.48 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 4 0.22 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 5 1295372 59338293 1 3 9 3 0 0 0 0 0.03 0 7 0.01 0.03 7 5 7 7 5 7 56.19 0.04 99.84 0 2 1 Whitelist KICH-US 0.41 0.01 0.01 0.03 0.33 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 6 0.33 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 14 NA NA 0 0 9 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.49 NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 20 15264297 15293836 1 1 9 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 56.19 99.02 0 0 4 NA Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 2 0.11 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::23656226-2d99-4548-959f-5c2eed803e33 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 23656226-2d99-4548-959f-5c2eed803e33 KICH 0.73 3.06 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220355 TCGA-KM-8438 23656226-2d99-4548-959f-5c2eed803e33 female alive C64.9 45 NA 4335 NA Included Kidney-ChRCC KICH US 0 142.6 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 5 NA NA 0 0 4 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.46 NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 7 29672660 29785496 1 1 4 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 13.95 0 99.77 0 2 NA Whitelist KICH-US 0.62 0.07 NA NA 0.59 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 10 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.39 NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 14 NA NA 0 0 4 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.3 NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2ea84e23-6a0a-4c5d-9c70-d5355a85df35 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 KICH 0.62 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220363 TCGA-KM-8639 2ea84e23-6a0a-4c5d-9c70-d5355a85df35 male alive C64.9 67 NA 953 NA Included Kidney-ChRCC KICH US 0 31.35 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 1 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 2 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 3 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 4 114287209 114325947 1 1 233 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 54.67 99.91 0 0 4 NA Whitelist KICH-US 0.62 0 NA NA 0.59 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 2 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 5 928958 174411985 40 141 233 9 13 8 10 101 0.71 0 129 0 0 129 82 129 131 84 84 54.67 99.88 0 18 3 4 Whitelist KICH-US 13 0.92 0 0 0 0.78 1 High confidence KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC After polyploidization 181 0.39 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 6 168315993 168340254 1 1 233 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 5 5 5 54.67 0.25 99.61 0 3 NA Whitelist KICH-US 0.62 0 NA NA 0.59 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 2 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 7 69942494 69989435 1 1 233 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 54.67 99.78 0 0 4 NA Whitelist KICH-US 0.62 0 NA NA 0.59 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 2 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 8 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 9 84269105 84288319 1 1 233 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 54.67 99.86 0 0 4 5 Whitelist KICH-US 0.62 0.01 NA NA 0.59 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 2 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 10 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 11 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 12 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 13 20416020 113987910 58 160 233 15 12 15 16 102 0.89 0 138 0 0 138 51 138 139 52 52 54.67 13.76 86.13 29 3 2 Whitelist KICH-US 0.62 0 0 0 0.92 1 High confidence KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC With other complex events 218 0.47 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 14 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 15 31856741 31926028 1 1 233 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 54.67 100 0 0 4 6 Whitelist KICH-US 0.62 0.1 NA NA 0.59 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 2 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 16 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 17 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 18 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 19 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 20 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 21 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 22 NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2f1c4db6-88a7-4a5d-a5fe-94d85f569440 X NA NA 0 0 233 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 KICH 0.9 3.05 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220360 TCGA-KM-8443 2f1c4db6-88a7-4a5d-a5fe-94d85f569440 male alive C64.9 57 NA 1128 NA Included Kidney-ChRCC KICH US 0 37.11 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 5 NA NA 0 0 5 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.52 NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.48 NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 14 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.04 NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.32 NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::2fc175d1-9d95-44fd-a53e-820f6f404551 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 2fc175d1-9d95-44fd-a53e-820f6f404551 KICH 0.94 1.63 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220439 TCGA-KN-8421 2fc175d1-9d95-44fd-a53e-820f6f404551 female alive C64.9 47 NA 2674 NA Included Kidney-ChRCC KICH US 0 87.96 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 4 116569338 116676604 1 1 3 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 37.85 0 99.98 0 2 NA Whitelist KICH-US 0.62 0.41 NA NA 0.59 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 14 106855319 106936659 1 1 3 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 37.85 0 99.62 0 2 NA Whitelist KICH-US 0.62 0.25 NA NA 0.59 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a 22 23015146 23080701 1 1 3 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 37.85 0 100 0 2 NA Whitelist KICH-US 0.62 0.13 NA NA 0.59 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::3129e869-bb2f-423a-bd20-d0daae33b11a X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 3129e869-bb2f-423a-bd20-d0daae33b11a KICH 0.81 1.6 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220348 TCGA-KL-8340 3129e869-bb2f-423a-bd20-d0daae33b11a male alive C64.9 34 NA 2024 NA Included Kidney-ChRCC KICH US 0 66.58 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 1 4423296 5555070 2 2 4 0 0 1 1 0 0.57 0.03 1 NA 0 NA NA NA NA NA NA 40.31 100 0 0 1 NA Whitelist KICH-US 0.68 0.12 NA 0 0.64 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 4 0.5 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 11 49839619 49874281 1 1 4 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 40.31 0 99.57 0 2 NA Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 19 53775172 53815481 1 1 4 0 0 1 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 40.31 0 99.83 0 2 NA Whitelist KICH-US 0.62 0.22 NA NA 0.59 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::366219b9-fde3-4d2d-82d3-15fe6245aa98 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 366219b9-fde3-4d2d-82d3-15fe6245aa98 KICH 0.87 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220490 TCGA-KN-8429 366219b9-fde3-4d2d-82d3-15fe6245aa98 female alive C64.9 38 NA 2064 NA Included Kidney-ChRCC KICH US 0 67.89 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 3 NA NA 0 0 2 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.33 NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 12 NA NA 0 0 2 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.25 NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::40f79cfe-a51f-497b-b06e-7a4f9004f092 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 40f79cfe-a51f-497b-b06e-7a4f9004f092 KICH 0.93 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220359 TCGA-KM-8442 40f79cfe-a51f-497b-b06e-7a4f9004f092 male alive C64.9 38 NA 674 NA Included Kidney-ChRCC KICH US 0 22.17 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 4 181826298 182018052 1 2 20 2 0 0 0 0 0.11 0.39 1 NA 0 NA NA NA NA NA NA 45.1 0 99.98 0 2 NA Whitelist KICH-US 0.54 0.64 NA 0 0.48 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 4 0.1 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 5 59232931 114973274 1 2 20 2 0 0 0 0 0.11 0.36 1 NA 0 NA NA NA NA NA NA 45.1 0 99.86 0 2 NA Whitelist KICH-US 0.54 0.61 NA 0 0.48 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 4 0.1 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 9 2028840 2048793 1 1 20 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 45.1 0 99.86 0 2 NA Whitelist KICH-US 0.62 0.78 NA NA 0.59 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 2 0.05 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 10 84042262 84357277 1 1 20 1 0 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 45.1 99.82 0 0 1 NA Whitelist KICH-US 0.62 0.82 NA NA 0.59 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 2 0.05 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 11 79931758 80471149 1 1 20 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 45.1 99.43 0 0 0 1 Whitelist KICH-US 0.62 0.83 NA NA 0.59 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 2 0.05 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 16 6655629 70647140 1 7 20 6 1 0 0 0 0 0 5 0 0 5 5 5 5 5 5 45.1 0.3 99.67 0 2 1 Whitelist KICH-US 0.13 0 0 0 0.09 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 14 0.35 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 20 3371898 16025750 1 5 20 4 1 0 0 0 0.04 0 3 0 0 NA NA NA 4 3 3 45.1 23.75 75.29 0 2 3 Whitelist KICH-US 0.45 0 0 0 0.36 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 10 0.25 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::452135f2-6de6-4593-a091-ddf6344ee431 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 452135f2-6de6-4593-a091-ddf6344ee431 KICH 0.94 1.53 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220336 TCGA-KL-8328 452135f2-6de6-4593-a091-ddf6344ee431 male alive C64.9 60 NA 3127 NA Included Kidney-ChRCC KICH US 0 102.86 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 3 88103799 88220724 4 4 6 1 1 1 1 0 1 0 1 0 0 NA NA NA NA NA NA 84.48 99.85 0 0 4 NA Whitelist KICH-US 1 0 0 0 1 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 8 0.67 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 9 23337423 23402447 1 1 6 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA 7 3 3 84.48 99.86 0 0 3 NA Whitelist KICH-US 0.62 0.08 NA NA 0.59 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 2 0.17 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e KICH 0.7 3.81 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220449 TCGA-KN-8422 4a88bc85-4c6e-4fac-8dbb-d3fc5f36b35e female alive C64.9 28 NA 775 NA Included Kidney-ChRCC KICH US 0 25.49 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::4e4faf51-2cbf-4910-a093-186660e4a19b X NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.16 NA NA NA 0 No KICH-US 4e4faf51-2cbf-4910-a093-186660e4a19b KICH 0.9 1.55 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220361 TCGA-KM-8476 4e4faf51-2cbf-4910-a093-186660e4a19b male alive C64.9 47 NA 2590 NA Included Kidney-ChRCC KICH US 0 85.2 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 1 NA NA 0 0 7 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.69 NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 3 25179600 182904830 1 2 7 2 0 0 0 0 0.11 0.08 1 NA 0.02 NA NA NA NA NA NA 33.69 0 99.95 0 2 NA Whitelist KICH-US 0.54 0.23 NA 0.02 0.48 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 4 0.29 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 5 58332454 58558948 1 1 7 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 33.69 0 99.86 0 2 NA Whitelist KICH-US 0.62 0.62 NA NA 0.59 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 13 NA NA 0 0 7 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.45 NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 16 82882617 83054632 1 1 7 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 33.69 0 99.89 0 2 NA Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::6101ffe6-2ef6-4256-9d6b-a7c545836995 X 50829895 50867407 1 1 7 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 33.69 0 99.78 0 2 NA Whitelist KICH-US 0.62 0.55 NA NA 0.59 0 No KICH-US 6101ffe6-2ef6-4256-9d6b-a7c545836995 KICH 0.96 1.65 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220333 TCGA-KL-8325 6101ffe6-2ef6-4256-9d6b-a7c545836995 female deceased C64.9 56 725 NA NA Included Kidney-ChRCC KICH US 1 23.85 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 1 46443852 48909842 1 2 305 2 0 0 0 0 0.11 0 4 NA 0 4 3 4 5 3 5 54.97 0.99 99.01 0 1 2 Whitelist KICH-US 0.54 0 NA 0 0.48 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 4 0.01 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 2 3255669 3431387 1 1 305 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 54.97 0 99.91 0 2 NA Whitelist KICH-US 0.62 0 NA NA 0.59 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 2 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 3 27225774 76470709 44 89 305 10 13 12 9 45 0.82 0 64 0 0 64 9 22 85 9 9 54.97 79.06 17.85 46 5 6 Whitelist KICH-US 15_8 0.66 0 0 0 0.86 1 High confidence KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC With other complex events 133 0.22 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 4 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 5 7407698 17053089 15 24 305 6 3 2 4 9 0.51 0 8 0 0 8 3 8 22 5 7 54.97 91.68 8.17 0 2 1 Whitelist KICH-US 3 0.87 0 0 0 0.64 1 Linked to high confidence KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC With other complex events 39 0.06 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 6 155189111 155715776 13 13 305 4 3 2 4 0 0.84 0.81 3 0 0 NA NA NA 5 3 5 54.97 0.33 99.53 0 2 4 Whitelist KICH-US 0.9 0.96 0 0 0.88 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 26 0.04 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 7 102092821 151144776 2 2 305 1 0 1 0 0 0.57 0 6 0 0 6 3 6 9 3 6 54.97 85.43 11.85 0 2 5 Whitelist KICH-US 0.68 0 0 0 0.64 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 4 0.01 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 8 48323075 117143870 26 74 305 7 5 8 6 48 0.86 0 70 0 0 70 5 8 75 5 7 54.97 96.43 3.39 16 8 4 Whitelist KICH-US 15_3 0.98 0 0 0 0.9 1 Low confidence KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC With other complex events 100 0.16 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 9 9493519 10307021 1 1 305 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 54.97 98.72 0.58 0 2 4 Whitelist KICH-US 0.62 0 NA NA 0.59 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 2 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 10 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 11 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 12 3184594 64529722 1 6 305 0 2 0 0 4 0.11 0.89 5 0.07 0 5 3 3 6 3 4 54.97 99.98 0 6 4 3 Whitelist KICH-US 8 0.54 1 0.07 0 0.48 1 Linked to low confidence KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC After polyploidization 8 0.01 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 13 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 14 NA NA 0 0 305 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.01 NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 15 40179423 68153782 54 119 305 13 18 12 11 65 0.54 0 94 0 0 94 10 10 103 10 10 54.97 72.28 22.8 18 3 8 Whitelist KICH-US 8 0.97 0 0 0 0.64 1 High confidence KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC With other complex events 173 0.28 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 16 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 17 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 18 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 19 NA NA 0 0 305 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.34 NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 20 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 21 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa 22 NA NA 0 0 305 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.81 NA NA NA 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 0 0 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::70e306ee-9584-49d6-81a1-a49d837ab6aa X 2440246 11063621 2 2 305 1 0 0 1 0 0.57 0 4 0.07 0 4 4 4 6 6 6 54.97 3.8 96.2 0 1 2 Whitelist KICH-US 0.68 0.01 0.07 0 0.64 1 No KICH-US 70e306ee-9584-49d6-81a1-a49d837ab6aa KICH 0.89 3.06 Kidney-ChRCC NA 4 0.01 stopgain,17_7577064_A_T,CN:2 4 KICH-US DO220349 TCGA-KL-8341 70e306ee-9584-49d6-81a1-a49d837ab6aa male deceased C64.9 41 754 NA NA Included Kidney-ChRCC KICH US 1 24.8 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 1 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 2 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 3 2956488 175489247 1 2 40 2 0 0 0 0 0.11 1 1 NA 0.04 NA NA NA NA NA NA 37.97 0 99.86 0 2 NA Whitelist KICH-US 0.54 1 NA 0.04 0.48 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 4 0.05 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 4 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 5 784281 86129942 26 26 40 10 5 5 6 0 0.45 0 6 0 0 6 3 4 7 3 3 37.97 50.75 49.11 3 3 1 Whitelist KICH-US 0.68 0 0 0 0.64 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 52 0.65 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 6 36597859 36688763 1 1 40 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 37.97 99.85 0 0 1 NA Whitelist KICH-US 0.62 0.76 NA NA 0.59 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 2 0.02 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 7 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 8 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 9 8869035 9725435 1 2 40 2 0 0 0 0 0.11 0.67 1 NA 0 NA NA NA NA NA NA 37.97 0 99.86 0 2 NA Whitelist KICH-US 0.54 0.87 NA 0 0.48 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 4 0.05 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 11 80056194 133744658 1 2 40 1 0 1 0 0 0.57 0.71 1 NA 0 NA NA NA NA NA NA 37.97 0 99.59 0 2 NA Whitelist KICH-US 0.68 0.9 NA 0 0.64 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 4 0.05 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 13 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 16 73312276 73396227 1 1 40 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37.97 0 99.99 0 2 NA Whitelist KICH-US 0.62 1 NA NA 0.59 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 2 0.02 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 17 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 18 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 19 28394037 28458150 1 1 40 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 37.97 0 99.83 0 2 NA Whitelist KICH-US 0.62 0.78 NA NA 0.59 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 2 0.02 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 20 15105079 15263165 1 1 40 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 37.97 0 98.94 0 2 NA Whitelist KICH-US 0.62 0.8 NA NA 0.59 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 2 0.02 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::83b3060c-2449-4581-88ef-817d126e4525 X 7042091 7132108 1 1 40 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 37.97 0 99.78 0 2 NA Whitelist KICH-US 0.62 0.9 NA NA 0.59 0 No KICH-US 83b3060c-2449-4581-88ef-817d126e4525 KICH 0.91 1.71 Kidney-ChRCC NA 2 0.02 NA 2 KICH-US DO220331 TCGA-KL-8323 83b3060c-2449-4581-88ef-817d126e4525 female deceased C64.9 57 1158 NA NA Included Kidney-ChRCC KICH US 1 38.09 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.47 NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 17 10244025 10260354 1 1 3 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 36.7 100 0 0 1 NA Whitelist KICH-US 0.62 0.23 NA NA 0.59 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 20 15833511 15929273 1 1 3 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 36.7 0.15 98.88 0 1 2 Whitelist KICH-US 0.62 0.19 NA NA 0.59 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 2 0.33 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::872092b3-d31e-44d7-bd03-e29f52f8ab5a X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 872092b3-d31e-44d7-bd03-e29f52f8ab5a KICH 0.9 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220357 TCGA-KM-8440 872092b3-d31e-44d7-bd03-e29f52f8ab5a male alive C64.9 37 NA 994 NA Included Kidney-ChRCC KICH US 0 32.7 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 1 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 2 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 4 183442376 183585762 1 1 13 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 41.09 0 99.98 0 2 NA Whitelist KICH-US 0.62 0.17 NA NA 0.59 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 2 0.08 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 6 104344962 104466744 1 1 13 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 41.09 99.76 0 0 1 NA Whitelist KICH-US 0.62 0.78 NA NA 0.59 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 2 0.08 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 8 NA NA 0 0 13 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.1 NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 9 9379214 9718760 1 2 13 2 0 0 0 0 0.11 0.09 1 NA 0 NA NA NA NA NA NA 41.09 0 99.85 0 2 NA Whitelist KICH-US 0.54 0.25 NA 0 0.48 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 4 0.15 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 12 NA NA 0 0 13 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0 NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 18 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.54 NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 21 NA NA 0 0 13 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0 NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8ac7f218-bd7b-4dda-8879-2cec49748e42 X NA NA 0 0 13 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.1 NA NA NA 0 No KICH-US 8ac7f218-bd7b-4dda-8879-2cec49748e42 KICH 0.92 1.57 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220339 TCGA-KL-8331 8ac7f218-bd7b-4dda-8879-2cec49748e42 female alive C64.9 48 NA 3010 NA Included Kidney-ChRCC KICH US 0 99.01 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 5 21185649 21446874 1 1 5 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 66.84 99.86 0 0 3 4 Whitelist KICH-US 0.62 0.52 NA NA 0.59 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 2 0.2 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 7 NA NA 0 0 5 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.1 NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 11 132713178 132772955 2 2 5 0 1 1 0 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 66.84 99.43 0 0 4 NA Whitelist KICH-US 0.68 0.08 NA 0 0.64 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 4 0.4 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 18 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.03 NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::8c9e1f60-1838-4aa4-a667-c1cef7dddbdf X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf KICH 0.72 3.36 Kidney-ChRCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7574017_T_C;17_7578403_A_C,CN:2 4 KICH-US DO220468 TCGA-KN-8424 8c9e1f60-1838-4aa4-a667-c1cef7dddbdf female alive C64.9 42 NA 1983 NA Included Kidney-ChRCC KICH US 0 65.23 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 1 71942993 72401866 4 4 60 4 0 0 0 0 0.01 0.03 6 0 0 6 5 6 13 5 5 48.16 42.1 57.89 0 1 0 Whitelist KICH-US 0.21 0.1 0 0 0.16 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 8 0.07 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 2 80351551 134312221 1 2 60 2 0 0 0 0 0.11 0.82 4 0 0 4 3 4 6 4 6 48.16 77.61 22.26 0 4 2 Whitelist KICH-US 0.54 0.96 0 0 0.48 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 4 0.03 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 3 78794517 144226471 1 2 60 2 0 0 0 0 0.11 0.8 4 0 0 4 3 4 4 3 4 48.16 35.93 63.94 0 4 2 Whitelist KICH-US 0.54 0.95 0 0 0.48 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 4 0.03 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 4 6033478 24579005 1 2 60 1 1 0 0 0 0.57 0.8 3 0.02 0 NA NA NA 5 3 3 48.16 0.07 99.91 0 2 1 Whitelist KICH-US 0.68 0.95 0.03 0 0.64 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 4 0.03 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 5 NA NA 0 0 60 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.4 NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 6 NA NA 0 0 60 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 1 NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 7 34353865 130616674 1 8 60 7 1 0 0 0 0 0 17 0 0 17 6 17 21 7 7 48.16 99.19 0.56 0 3 2 Whitelist KICH-US 0.06 0.01 0 0 0.04 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 16 0.13 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 8 112576968 138655426 1 2 60 1 1 0 0 0 0.57 0.77 4 NA 0 4 3 4 5 3 3 48.16 99.89 0 0 4 3 Whitelist KICH-US 0.68 0.93 NA 0 0.64 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 4 0.03 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 9 100426586 133667473 1 3 60 2 1 0 0 0 0.3 0.3 4 0 0 4 4 4 6 5 5 48.16 5.89 93.97 0 1 2 Whitelist KICH-US 0.62 0.55 0 0 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 6 0.05 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 10 67411783 67458110 1 1 60 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 48.16 99.84 0 0 3 4 Whitelist KICH-US 0.62 0.76 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 11 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 12 96691583 96765688 1 1 60 1 0 0 0 0 0.39 0.21 2 0 NA NA NA NA 4 3 3 48.16 99.86 0.06 0 2 3 Whitelist KICH-US 0.62 0.43 0 NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 13 93900248 94064383 1 1 60 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 48.16 0.14 99.86 0 0 2 Whitelist KICH-US 0.62 0.9 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 14 47819487 52189282 1 2 60 2 0 0 0 0 0.11 0.71 3 NA 0 NA NA NA 6 4 4 48.16 3.77 80.32 0 2 0 Whitelist KICH-US 0.54 0.9 NA 0 0.48 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 4 0.03 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 15 60992285 61015601 1 1 60 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA 5 3 5 48.16 0.03 99.87 0 1 2 Whitelist KICH-US 0.62 0.88 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 16 12969151 89500029 1 3 60 3 0 0 0 0 0.03 0.08 3 0.02 0 NA NA NA 5 3 5 48.16 0.23 98.73 0 2 1 Whitelist KICH-US 0.41 0.22 0.02 0 0.33 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 6 0.05 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 17 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 19 NA NA 0 0 60 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KICH-US NA 0.03 0 NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 20 37604629 37621304 1 1 60 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 48.16 99.01 0 0 3 4 Whitelist KICH-US 0.62 1 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 21 16350914 16423688 1 1 60 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 48.16 0 77.35 0 2 NA Whitelist KICH-US 0.62 0.38 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::955d428c-8fe8-456b-b86d-65ea6c2a1b18 X 32980895 33001340 1 1 60 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 48.16 100 0 0 1 NA Whitelist KICH-US 0.62 0.62 NA NA 0.59 0 No KICH-US 955d428c-8fe8-456b-b86d-65ea6c2a1b18 KICH 0.55 2.59 Kidney-ChRCC NA 2 0.02 NA 3 KICH-US DO220479 TCGA-KN-8427 955d428c-8fe8-456b-b86d-65ea6c2a1b18 male alive C64.9 54 NA 18 NA Included Kidney-ChRCC KICH US 0 0.59 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 4 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.2 NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9680b5ff-1882-434f-9981-e8ac33764b93 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9680b5ff-1882-434f-9981-e8ac33764b93 KICH 0.93 1.93 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220362 TCGA-KM-8477 9680b5ff-1882-434f-9981-e8ac33764b93 male alive C64.9 56 NA 1553 NA Included Kidney-ChRCC KICH US 0 51.09 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 4 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.03 NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 6 NA NA 0 0 6 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.56 NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.51 NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 9 8810121 16008838 1 2 6 1 1 0 0 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 37.71 0 99.86 0 2 NA Whitelist KICH-US 0.68 0.08 NA 0 0.64 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 4 0.33 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 14 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.06 NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aa02d46-294b-4e99-b9ee-56edcbfb5275 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aa02d46-294b-4e99-b9ee-56edcbfb5275 KICH 0.92 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220554 TCGA-KO-8406 9aa02d46-294b-4e99-b9ee-56edcbfb5275 female alive C64.9 17 NA 2404 NA Included Kidney-ChRCC KICH US 0 79.08 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 1 196767013 196892001 1 1 4 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 37.85 100 0 0 1 NA Whitelist KICH-US 0.62 0.52 NA NA 0.59 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 7 126591547 126732192 1 1 4 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 37.85 0.09 99.68 0 1 2 Whitelist KICH-US 0.62 0.42 NA NA 0.59 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 8 103273998 103369599 1 1 4 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 37.85 0.07 99.93 0 1 2 Whitelist KICH-US 0.62 0.41 NA NA 0.59 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 13 94352376 94372434 1 1 4 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 37.85 100 0 0 1 NA Whitelist KICH-US 0.62 0.32 NA NA 0.59 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 2 0.25 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 KICH 0.8 1.61 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220342 TCGA-KL-8334 9aabcbd7-a26a-49b1-abf1-02c0dc3adcf2 female alive C64.9 37 NA 2536 NA Included Kidney-ChRCC KICH US 0 83.42 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 2 121887467 122323286 1 1 7 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 51.16 99.9 0 0 1 NA Whitelist KICH-US 0.62 0.7 NA NA 0.59 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.64 NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 5 1125431 1295607 1 1 7 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 51.16 99.77 0.09 0 1 2 Whitelist KICH-US 0.62 0.62 NA NA 0.59 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 11 40221051 82286470 2 2 7 0 2 0 0 0 0.11 0 3 0 0 NA NA NA NA NA NA 51.16 71.24 28.33 0 1 2 Whitelist KICH-US 0.54 0.02 0 0 0.48 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 4 0.29 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 12 117466501 117525934 1 1 7 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 51.16 0 99.92 0 2 NA Whitelist KICH-US 0.62 0.53 NA NA 0.59 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a122d361-835e-4cf2-850f-af7864aa112c X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a122d361-835e-4cf2-850f-af7864aa112c KICH 0.96 1.46 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220354 TCGA-KL-8346 a122d361-835e-4cf2-850f-af7864aa112c male alive C64.9 62 NA 1536 NA Included Kidney-ChRCC KICH US 0 50.53 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 18 4128225 4142156 1 1 1 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 17.48 0 99.96 0 2 NA Whitelist KICH-US 0.62 0.1 NA NA 0.59 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 2 1 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::a5af1391-89d3-4f41-930e-7e8272afec98 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US a5af1391-89d3-4f41-930e-7e8272afec98 KICH 0.74 1.81 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220352 TCGA-KL-8344 a5af1391-89d3-4f41-930e-7e8272afec98 male alive C64.9 51 NA 876 NA Included Kidney-ChRCC KICH US 0 28.82 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 4 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.2 NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::af1111af-9384-4e37-9b16-227d38007ebd X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US af1111af-9384-4e37-9b16-227d38007ebd KICH 0.88 1.52 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220510 TCGA-KN-8432 af1111af-9384-4e37-9b16-227d38007ebd female alive C64.9 86 NA 76 NA Included Kidney-ChRCC KICH US 0 2.5 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 1 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 2 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 3 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 4 26157294 33501218 2 2 37 0 1 1 0 0 0.57 0.01 3 0 0 NA NA NA 8 7 7 47.43 99.99 0 0 4 5 Whitelist KICH-US 0.68 0.05 0 0 0.64 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 4 0.05 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 5 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 6 NA NA 0 0 37 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.9 NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 7 138359588 145062216 1 1 37 0 0 1 0 0 0.39 0.45 2 NA NA NA NA NA 5 3 3 47.43 93.77 6 0 2 4 Whitelist KICH-US 0.62 0.69 NA NA 0.59 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 2 0.03 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 8 168324 109651813 1 3 37 2 0 0 1 0 0.3 0.12 4 0 0 4 3 4 4 3 3 47.43 67.14 29.33 0 8 2 Whitelist KICH-US 0.62 0.3 0 0 0.59 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 6 0.08 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 11 41973835 43838016 2 2 37 0 1 0 1 0 0.57 0.69 3 NA 0 NA NA NA 4 4 4 47.43 68.42 31.15 2 4 2 Whitelist KICH-US 0.68 0.89 NA 0 0.64 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 4 0.05 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 12 130263523 133817494 2 2 37 1 0 1 0 0 0.57 0 4 0 0 4 4 4 9 9 9 47.43 99.89 0 6 3 4 Whitelist KICH-US 0.68 0 0 0 0.64 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 4 0.05 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 13 32460882 35176905 1 2 37 0 0 0 1 1 0.39 0.04 1 0 NA NA NA NA NA NA NA 47.43 0 100 0 2 NA Whitelist KICH-US 0.68 0.13 0 NA 0.59 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 3 0.04 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 16 72990138 73220234 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 47.43 99.88 0 0 3 4 Whitelist KICH-US 0.62 1 NA NA 0.59 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 2 0.03 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 17 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 1 NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 18 NA NA 0 0 37 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.5 NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 19 NA NA 0 0 37 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.76 NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 20 15894487 15922701 1 1 37 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 47.43 0 99.58 0 2 NA Whitelist KICH-US 0.62 0.78 NA NA 0.59 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 2 0.03 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 22 NA NA 0 0 37 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.21 NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b08dfba8-6afb-4217-9259-72be6f1f3363 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b08dfba8-6afb-4217-9259-72be6f1f3363 KICH 0.77 2.95 Kidney-ChRCC NA 0 0 NA 4 KICH-US DO220478 TCGA-KN-8426 b08dfba8-6afb-4217-9259-72be6f1f3363 male alive C64.9 50 NA 108 NA Included Kidney-ChRCC KICH US 0 3.55 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 1 116336464 178307095 1 1 4 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 30.12 75.13 24.86 0 1 2 Whitelist KICH-US 0.62 0.52 NA NA 0.59 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 2 0.25 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 2 NA NA 0 0 4 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.54 NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.49 NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 4 NA NA 0 0 4 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.48 NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 6 NA NA 0 0 4 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.45 NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::b4a0bf74-1381-4c17-b97d-206810d9e59a X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US b4a0bf74-1381-4c17-b97d-206810d9e59a KICH 0.73 1.86 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220351 TCGA-KL-8343 b4a0bf74-1381-4c17-b97d-206810d9e59a male alive C64.9 72 NA 1815 NA Included Kidney-ChRCC KICH US 0 59.7 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 4 61651939 62334278 2 2 3 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 33.08 0 99.8 0 2 NA Whitelist KICH-US 0.68 0.06 NA 0 0.64 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 4 0.67 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.39 NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::c689ae1d-4a6b-45db-b4d1-6b34c5c61522 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US c689ae1d-4a6b-45db-b4d1-6b34c5c61522 KICH 0.85 1.66 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220350 TCGA-KL-8342 c689ae1d-4a6b-45db-b4d1-6b34c5c61522 female alive C64.9 45 NA 1835 NA Included Kidney-ChRCC KICH US 0 60.36 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 10 89709395 90002866 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 51.9 0.22 99.61 0 0 2 Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 2 0.25 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 14 102797537 103246683 1 1 4 0 1 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 51.9 99.08 0 0 4 5 Whitelist KICH-US 0.62 0.3 NA NA 0.59 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 2 0.25 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 19 43849790 56749959 1 2 4 0 1 0 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 51.9 92.72 0 0 3 NA Whitelist KICH-US 0.68 0.01 NA 0 0.64 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 4 0.5 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::cc316faf-dcb1-4dea-b8b0-a17d000ff40f X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US cc316faf-dcb1-4dea-b8b0-a17d000ff40f KICH 0.66 2.8 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220474 TCGA-KN-8425 cc316faf-dcb1-4dea-b8b0-a17d000ff40f male alive C64.9 53 NA 2211 NA Included Kidney-ChRCC KICH US 0 72.73 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.17 NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 KICH 0.42 2.92 Kidney-ChRCC NA 0 0 NA 3 KICH-US DO220549 TCGA-KO-8405 d52c3cb6-921e-4f26-b49c-e6e4f11f9c06 male alive C64.9 29 NA 2279 NA Included Kidney-ChRCC KICH US 0 74.97 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 11 36914266 97110929 1 2 4 0 2 0 0 0 0.11 0.01 1 NA 0 NA NA NA NA NA NA 35.29 0 99.44 0 2 NA Whitelist KICH-US 0.54 0.05 NA 0 0.48 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 4 0.5 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 12 11190988 11257014 1 1 4 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 35.29 0 99.92 0 2 NA Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 2 0.25 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 20 NA NA 0 0 4 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.24 NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e 22 NA NA 0 0 4 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.16 NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::e1e15226-9f8e-4035-8f08-eb1fed57080e X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US e1e15226-9f8e-4035-8f08-eb1fed57080e KICH 0.8 1.68 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578507_C_G,CN:1 2 KICH-US DO220519 TCGA-KN-8434 e1e15226-9f8e-4035-8f08-eb1fed57080e female alive C64.9 65 NA 1125 NA Included Kidney-ChRCC KICH US 0 37.01 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 4 62829660 62865619 1 1 2 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 38.73 0 99.81 0 2 NA Whitelist KICH-US 0.62 0.32 NA NA 0.59 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 2 0.5 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 10 47607671 47698746 1 1 2 0 0 0 1 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 38.73 99.82 0 0 1 NA Whitelist KICH-US 0.62 0.25 NA NA 0.59 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 2 0.5 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::ee8c1919-17a9-4df1-8aa5-79546621b23c X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US ee8c1919-17a9-4df1-8aa5-79546621b23c KICH 0.89 1.58 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220577 TCGA-KO-8411 ee8c1919-17a9-4df1-8aa5-79546621b23c male alive C64.9 58 NA 3141 NA Included Kidney-ChRCC KICH US 0 103.32 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 0.55 NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 9 11383203 11472308 1 1 7 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 0 0.06 99.23 0 1 2 Whitelist KICH-US 0.62 0.48 NA NA 0.59 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 12 9549011 10191639 1 3 7 0 0 1 2 0 0.3 0 1 0 0 NA NA NA NA NA NA 0 0 99.92 0 2 NA Whitelist KICH-US 0.62 0.02 0 0 0.59 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 6 0.43 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 15 24409362 24484602 1 1 7 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 0 0 100 0 2 NA Whitelist KICH-US 0.62 0.4 NA NA 0.59 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 17 38111130 38361272 1 1 7 0 1 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 0 0 100 0 2 NA Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 2 0.14 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f1c1502e-1bd6-425a-b651-454363809668 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f1c1502e-1bd6-425a-b651-454363809668 KICH 0.64 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220535 TCGA-KN-8437 f1c1502e-1bd6-425a-b651-454363809668 female alive C64.9 42 NA 2304 NA Included Kidney-ChRCC KICH US 0 75.79 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 1 51084144 51469282 1 1 81 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 39.31 100 0 0 0 1 Whitelist KICH-US 0.62 0.08 NA NA 0.59 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 2 0.01 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 2 125064334 125221178 1 2 81 2 0 0 0 0 0.11 0.16 3 NA 0 NA NA NA NA NA NA 39.31 99.89 0 0 1 0 Whitelist KICH-US 0.54 0.37 NA 0 0.48 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 4 0.02 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 3 95716854 95920107 1 1 81 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 39.31 0 99.95 0 2 NA Whitelist KICH-US 0.62 0.15 NA NA 0.59 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 2 0.01 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 4 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 5 40655 32685928 56 61 81 18 12 12 14 5 0.63 0 65 0 0 65 7 15 66 7 15 39.31 14.93 84.92 5 1 2 Whitelist KICH-US 0.77 0 0 0 0.71 1 High confidence KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC With other complex events 117 0.72 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 6 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 7 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 8 137900333 138012812 1 1 81 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 39.31 36.96 63.04 0 1 2 Whitelist KICH-US 0.62 0.32 NA NA 0.59 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 2 0.01 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 9 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 10 42428593 42443308 3 3 81 1 1 0 1 0 0.8 0.1 1 0 0 NA NA NA NA NA NA 39.31 99.82 0 0 1 NA Whitelist KICH-US 0.87 0.27 0 0 0.84 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 6 0.04 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 11 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA 1 NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 12 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 13 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 14 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 15 63792574 63908143 1 1 81 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 39.31 0 100 0 2 NA Whitelist KICH-US 0.62 0.91 NA NA 0.59 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 2 0.01 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 16 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 17 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 18 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 19 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 20 14043603 14627072 1 1 81 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 39.31 0.93 98.11 0 1 2 Whitelist KICH-US 0.62 1 NA NA 0.59 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 2 0.01 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 21 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 22 39705008 51093320 1 5 81 0 1 0 0 4 0.39 0 5 0 0 5 4 5 6 5 5 39.31 3.07 96.52 0 1 2 Whitelist KICH-US 5 0.93 0 0 0 0.59 1 Linked to high confidence KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC Canonical without polyploidization 6 0.04 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f2b58595-dec0-4194-ab33-7c7dc6c058a6 X NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 1 No KICH-US f2b58595-dec0-4194-ab33-7c7dc6c058a6 KICH 0.94 1.59 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220525 TCGA-KN-8435 f2b58595-dec0-4194-ab33-7c7dc6c058a6 male alive C64.9 59 NA 2727 NA Included Kidney-ChRCC KICH US 0 89.7 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 20 46612551 46987896 1 1 1 0 0 1 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 0 0 99.02 0 2 NA Whitelist KICH-US 0.62 0.09 NA NA 0.59 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 2 1 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 KICH 0.56 2 Kidney-ChRCC NA 0 0 NA 2 KICH-US DO220358 TCGA-KM-8441 f31ba8ec-a3dd-4dd8-8d15-f6c5975ebe44 female alive C64.9 61 NA 114 NA Included Kidney-ChRCC KICH US 0 3.75 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 6 24432966 134536725 1 2 6 1 1 0 0 0 0.57 0.05 3 NA 0 NA NA NA NA NA NA 36.72 99.72 0.04 0 1 2 Whitelist KICH-US 0.68 0.15 NA 0 0.64 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 4 0.33 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 14 73898966 76458684 1 1 6 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 36.72 2.38 96.7 0 1 2 Whitelist KICH-US 0.62 0.39 NA NA 0.59 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 2 0.17 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 16 72798663 73061632 1 1 6 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 36.72 0 99.91 0 2 NA Whitelist KICH-US 0.62 0.35 NA NA 0.59 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 2 0.17 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 18 36148560 36173348 1 1 6 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 36.72 0 99.96 0 2 NA Whitelist KICH-US 0.62 0.35 NA NA 0.59 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 2 0.17 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 21 17779531 25991619 1 1 6 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 36.72 0 77.65 0 2 NA Whitelist KICH-US 0.62 0.21 NA NA 0.59 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 2 0.17 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KICH-US::f3ba1cf8-ac67-4da8-96f3-8680dc55f247 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KICH-US NA NA NA NA NA 0 No KICH-US f3ba1cf8-ac67-4da8-96f3-8680dc55f247 KICH 0.92 1.62 Kidney-ChRCC NA 0 0 nonsynonymous_SNV,17_7578396_T_G,CN:1 2 KICH-US DO220423 TCGA-KN-8418 f3ba1cf8-ac67-4da8-96f3-8680dc55f247 female alive C64.9 41 NA 3474 NA Included Kidney-ChRCC KICH US 0 114.28 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 1 0 249250621 0 0 24 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist KIRC-US NA 0 0 NA NA 0 High confidence KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 False negative; manually included KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 2 147470695 147646701 4 4 24 1 3 0 0 0 0.11 0.14 2 0 0 NA NA NA NA NA NA 19.75 0.07 99.83 0 2 3 Whitelist KIRC-US 0.54 0.33 0 0 0.48 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 8 0.17 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 3 55476736 56127079 1 3 24 0 1 0 0 2 0.39 0.01 4 0 0 4 4 4 8 8 8 19.75 28.21 71.74 0 1 2 Whitelist KIRC-US 0.62 0.03 0 0 0.59 0 High confidence KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC Canonical without polyploidization 4 0.08 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 False negative; manually included KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 4 79679458 142052675 1 2 24 1 1 0 0 0 0.57 0.67 1 NA 0 NA NA NA NA NA NA 19.75 0 99.79 0 2 NA Whitelist KIRC-US 0.68 0.88 NA 0 0.64 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 4 0.08 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 5 103952676 106460625 1 5 24 0 1 0 0 4 0.39 0 6 0 0 6 3 4 13 7 7 19.75 41.25 58.62 0 3 2 Whitelist KIRC-US 0.93 0 0 0 0.59 0 High confidence KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC Canonical without polyploidization 6 0.12 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 False negative; manually included KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 6 NA NA 0 0 24 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0 0 NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 11 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 13 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::0487fc41-386c-4d76-9084-daf959bf5e98 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 0487fc41-386c-4d76-9084-daf959bf5e98 KIRC 0.78 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19733 TCGA-CW-5585 0487fc41-386c-4d76-9084-daf959bf5e98 male alive C64.9 51 NA 2609 NA Included Kidney-RCC KIRC US 0 85.82 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 1 NA NA 0 0 3 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.45 NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.32 NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 12 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.33 NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae 22 NA NA 0 0 3 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.13 NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::11ab53c8-6366-4bc9-b60d-23e6ed2d1cae X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae KIRC 0.49 3.26 Kidney-RCC NA 0 0 NA 4 KIRC-US DO19048 TCGA-A3-3372 11ab53c8-6366-4bc9-b60d-23e6ed2d1cae male alive C64.9 64 NA 735 NA Included Kidney-RCC KIRC US 0 24.18 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.55 NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 5 96668095 96793604 1 3 5 1 0 0 1 1 0.57 0 2 NA 0 NA NA NA NA NA NA 9.89 46.38 53.49 0 2 3 Whitelist KIRC-US 0.62 0.01 NA 0 0.64 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 5 0.5 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 8 NA NA 0 0 5 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.46 NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.32 NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1adb05d4-e1ca-4ede-81c7-ff24a243abae X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1adb05d4-e1ca-4ede-81c7-ff24a243abae KIRC 0.67 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18988 TCGA-B2-4099 1adb05d4-e1ca-4ede-81c7-ff24a243abae male alive C64.9 83 NA 111 NA Included Kidney-RCC KIRC US 0 3.65 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 3 63399955 64555123 3 3 11 0 1 1 1 0 0.8 0 5 0 0 5 3 5 11 5 8 14.67 33.22 66.73 0 1 2 Whitelist KIRC-US 0.87 0 0 0 0.84 0 High confidence KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC Canonical without polyploidization 6 0.27 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 False negative; manually included KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 4 NA NA 0 0 11 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.76 NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 5 0 180915260 0 0 11 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.1 NA NA NA 0 High confidence KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 False negative; manually included KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 7 70320414 73224119 1 1 11 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 14.67 0 99.77 0 2 NA Whitelist KIRC-US 0.62 0.7 NA NA 0.59 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 2 0.09 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::1e417b93-837d-4110-9090-239eb82c3e20 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 1e417b93-837d-4110-9090-239eb82c3e20 KIRC 0.44 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16269 TCGA-BP-4968 1e417b93-837d-4110-9090-239eb82c3e20 male alive C64.9 40 NA 1746 NA Included Kidney-RCC KIRC US 0 57.43 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 1 197113048 197517420 1 1 14 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 9.98 0 100 0 2 NA Whitelist KIRC-US 0.62 0.25 NA NA 0.59 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 2 0.07 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 2 112816615 115184934 1 1 14 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.98 0 99.91 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 2 0.07 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 3 NA NA 0 0 14 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 0 NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 5 87445373 89613272 1 4 14 2 0 0 0 2 0.11 0 2 0 0 NA NA NA NA NA NA 9.98 50.34 49.52 0 2 3 Whitelist KIRC-US 0.21 0 0 0 0.48 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 6 0.21 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 9 113590518 115999743 1 1 14 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 9.98 0 99.86 0 2 NA Whitelist KIRC-US 0.62 0.68 NA NA 0.59 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 2 0.07 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 19 NA NA 0 0 14 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.11 NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::267ff78b-bceb-466e-8582-c560fe227ff0 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 267ff78b-bceb-466e-8582-c560fe227ff0 KIRC 0.36 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17977 TCGA-CJ-4918 267ff78b-bceb-466e-8582-c560fe227ff0 male deceased C64.9 64 93 NA NA Included Kidney-RCC KIRC US 1 3.06 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 1 NA NA 0 0 12 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.19 NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 3 0 198022430 0 0 12 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist KIRC-US NA 0.04 NA NA NA 0 High confidence KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 False negative; manually included KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 5 103682797 110820354 1 2 12 0 0 1 0 1 0.39 0.01 2 NA NA NA NA NA NA NA NA 15.4 39.97 59.89 0 2 3 Whitelist KIRC-US 0.68 0.03 NA NA 0.59 0 High confidence KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC Canonical without polyploidization 3 0.12 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 False negative; manually included KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 6 96399973 101117041 1 5 12 1 0 1 1 2 0.8 0 5 0 0 5 5 5 6 6 6 15.4 42.37 57.48 0 1 2 Whitelist KIRC-US 0.93 0 0 0 0.84 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 8 0.33 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 8 NA NA 0 0 12 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.71 NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 9 NA NA 0 0 12 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.63 NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 10 NA NA 0 0 12 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.68 NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 12 NA NA 0 0 12 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.69 NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::28e9b6f9-ab6a-400b-a6a9-79095a443591 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 28e9b6f9-ab6a-400b-a6a9-79095a443591 KIRC 0.62 1.93 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17178 TCGA-AK-3454 28e9b6f9-ab6a-400b-a6a9-79095a443591 male alive C64.9 84 NA 874 NA Included Kidney-RCC KIRC US 0 28.75 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 1 NA NA 0 0 1426 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 2 11969466 75460870 8 15 1426 3 3 2 0 7 0.39 0 13 0 0 13 13 13 15 15 15 4.24 14.27 85.64 0 1 2 Whitelist KIRC-US 3 0.93 0 0 0 0.59 1 High confidence KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC Canonical without polyploidization 23 0.01 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 3 20704347 85709275 2 12 1426 2 1 1 0 8 0.57 0 14 0 0 14 14 14 15 15 15 4.24 16.69 83.17 0 1 2 Whitelist KIRC-US 2 0.83 0 0 0 0.64 1 Linked to high confidence KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC Canonical without polyploidization 16 0.01 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 4 NA NA 0 0 1426 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 5 140129029 171935828 1 2 1426 0 2 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 4.24 0 99.87 0 2 NA Whitelist KIRC-US 0.54 0 0 0 0.48 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 4 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 6 NA NA 0 0 1426 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 7 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 8 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 9 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 10 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 11 NA NA 0 0 1426 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 12 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 13 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 14 61896353 62061596 1 1 1426 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 4.24 0.15 98.93 0 2 3 Whitelist KIRC-US 0.62 0 NA NA 0.59 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 2 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 15 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 16 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 17 35728790 36400374 1 2 1426 0 1 0 1 0 0.57 0 2 NA 0 NA NA NA NA NA NA 4.24 0.83 99.17 0 2 3 Whitelist KIRC-US 0.68 0 NA 0 0.64 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 4 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 18 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 19 NA NA 0 0 1426 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 20 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 21 10411351 48077528 183 785 1426 47 45 50 41 602 0.82 0 438 0 0 438 70 84 438 70 70 4.24 22.64 54.06 0 2 1 Whitelist KIRC-US X 0.92 0 0 0 0.86 1 High confidence KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC With other complex events 968 0.34 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 22 NA NA 0 0 1426 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2939c03a-6f3f-4f7b-b246-34361baadeb9 X 58249888 155116329 594 1194 1426 150 139 146 159 600 0.7 0 624 0 0 624 624 624 625 625 625 4.24 30.33 69.64 0 1 2 Whitelist KIRC-US 0.85 0 0 0 0.78 1 High confidence KIRC-US 2939c03a-6f3f-4f7b-b246-34361baadeb9 KIRC 0.8 1.97 Kidney-RCC Canonical without polyploidization 1788 0.63 NA 2 KIRC-US DO17373 TCGA-CJ-5681 2939c03a-6f3f-4f7b-b246-34361baadeb9 female deceased C64.9 44 552 NA NA Included Kidney-RCC KIRC US 1 18.16 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 3 80367412 83626348 6 6 9 1 1 1 3 0 0.57 0 7 0 0 7 7 7 8 8 8 14.25 41.08 58.87 0 2 1 Whitelist KIRC-US 0.68 0 0 0 0.64 1 High confidence KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC Canonical without polyploidization 12 0.67 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 8 122500632 122545356 1 1 9 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 14.25 0 99.99 0 2 NA Whitelist KIRC-US 0.62 0.63 NA NA 0.59 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 2 0.11 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::2ed3296a-5b10-40d8-8af4-90dc031657cd X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 2ed3296a-5b10-40d8-8af4-90dc031657cd KIRC 0.58 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18572 TCGA-AK-3455 2ed3296a-5b10-40d8-8af4-90dc031657cd female deceased C64.9 71 683 NA NA Included Kidney-RCC KIRC US 1 22.47 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 1 NA NA 0 0 11 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.81 NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 3 177637797 177700487 2 2 11 0 0 1 1 0 0.57 0.04 1 NA 0 NA NA NA NA NA NA 9.69 59.84 40.11 0 2 NA Whitelist KIRC-US 0.68 0.13 NA 0 0.64 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 4 0.18 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 8 53454959 54497119 2 2 11 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 4 4 4 9.69 20.75 79.24 0 2 NA Whitelist KIRC-US 0.68 0 0 0 0.64 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 4 0.18 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 9 9322136 9897627 2 2 11 2 0 0 0 0 0.11 0.01 1 NA 0 NA NA NA NA NA NA 9.69 0 99.3 0 2 NA Whitelist KIRC-US 0.54 0.04 NA 0 0.48 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 4 0.18 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::33cf0893-0411-4758-aa90-602bfedf0850 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 33cf0893-0411-4758-aa90-602bfedf0850 KIRC 0.73 1.88 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17074 TCGA-BP-4807 33cf0893-0411-4758-aa90-602bfedf0850 male alive C64.9 42 NA 211 NA Included Kidney-RCC KIRC US 0 6.94 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 1 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 2 44352665 44582727 1 1 27 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 8.73 0.09 99.78 0 2 3 Whitelist KIRC-US 0.62 0.9 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 3 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 4 86427157 87145692 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.73 0.38 99.4 0 2 3 Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 5 NA NA 0 0 27 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.48 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 6 122997124 123298672 1 1 27 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 8.73 0.18 99.68 0 2 3 Whitelist KIRC-US 0.62 0.88 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 7 NA NA 0 0 27 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.86 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 8 8578351 9307380 1 1 27 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.73 74.59 25.4 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 9 15749484 114870579 1 3 27 2 1 0 0 0 0.3 0 5 0.03 0 5 3 5 7 5 5 8.73 0.62 98.67 2 2 1 Whitelist KIRC-US 0.62 0.02 0.03 0 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 6 0.11 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 10 90755569 91387142 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.73 0.47 99.36 0 2 3 Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 12 40434152 69511889 2 4 27 0 2 0 0 2 0.11 0.01 5 0 0 5 4 5 6 4 4 8.73 0.81 99.11 0 2 3 Whitelist KIRC-US 0.54 0.04 0 0 0.48 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 6 0.11 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 13 NA NA 0 0 27 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.83 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 14 64732371 71965571 1 2 27 0 2 0 0 0 0.11 0.21 4 NA 0 4 4 4 5 5 5 8.73 0.86 98.22 0 2 3 Whitelist KIRC-US 0.54 0.43 NA 0 0.48 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 4 0.07 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 17 42997649 55398071 1 1 27 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 8.73 13.21 85.96 0 2 NA Whitelist KIRC-US 0.62 0.03 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 18 56195911 56291733 1 1 27 0 1 0 0 0 0.39 0.16 4 NA 0 4 4 4 6 5 5 8.73 95.24 0.12 0 1 2 Whitelist KIRC-US 0.62 0.37 NA 0 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 19 NA NA 0 0 27 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.26 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 21 35806161 36476419 1 1 27 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 8.73 1.39 75.96 0 2 3 Whitelist KIRC-US 0.62 0.53 NA NA 0.59 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 2 0.04 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a 22 NA NA 0 0 27 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.52 NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3cbca837-f5a7-4a87-8f02-c59eac232d5a X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3cbca837-f5a7-4a87-8f02-c59eac232d5a KIRC 0.48 2.05 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16110 TCGA-A3-3308 3cbca837-f5a7-4a87-8f02-c59eac232d5a female alive C64.9 77 NA 16 NA Included Kidney-RCC KIRC US 0 0.53 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 3 0 198022430 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 0 High confidence KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 False negative; manually included KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 4 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.08 NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 11 18899444 18934014 1 1 9 0 1 0 0 0 0.39 0.01 1 0 0 NA NA NA NA NA NA 9.47 0 99.57 0 2 NA Whitelist KIRC-US 0.62 0.03 0 0 0.59 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 2 0.11 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 13 0 115169878 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.02 NA NA NA 0 High confidence KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 False negative; manually included KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3e976301-4042-4ac0-8f01-ef2f1a8161a6 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3e976301-4042-4ac0-8f01-ef2f1a8161a6 KIRC 0.6 2.02 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17791 TCGA-CJ-4639 3e976301-4042-4ac0-8f01-ef2f1a8161a6 female alive C64.9 49 NA 2308 NA Included Kidney-RCC KIRC US 0 75.92 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 1 NA NA 0 0 5 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.17 NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.61 NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 3 6973483 133672488 1 2 5 2 0 0 0 0 0.11 0.04 4 NA 0 4 4 4 5 5 5 11.74 27.42 72.53 0 1 2 Whitelist KIRC-US 0.54 0.15 NA 0 0.48 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 4 0.4 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 13 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.05 NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::3f93d1cf-a307-4e29-9e6f-239e9ffaa179 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 KIRC 0.56 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16248 TCGA-CW-6093 3f93d1cf-a307-4e29-9e6f-239e9ffaa179 male alive C64.9 73 NA 2431 NA Included Kidney-RCC KIRC US 0 79.97 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 1 NA NA 0 0 13 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.51 NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 2 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 3 0 198022430 0 0 13 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.82 NA NA NA 0 High confidence KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 False negative; manually included KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 5 NA NA 0 0 13 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.42 NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 8 NA NA 0 0 13 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.33 NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 10 13839487 45519032 1 1 13 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 5.95 66.31 33.51 0 1 2 Whitelist KIRC-US 0.62 0.7 NA NA 0.59 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 2 0.08 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 11 124263778 124786813 1 2 13 0 0 1 0 1 0.39 0 2 0.01 NA NA NA NA NA NA NA 5.95 0 99.56 0 1 2 Whitelist KIRC-US 0.68 0 0.01 NA 0.59 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 3 0.12 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 18 22839293 69309951 2 7 13 1 1 0 0 5 0.57 0 5 0 0 5 5 5 6 6 6 5.95 13.19 86.75 0 1 2 Whitelist KIRC-US 0.77 0 0 0 0.64 0 High confidence KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC Canonical without polyploidization 9 0.35 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 False negative; manually included KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc KIRC 0.59 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18651 TCGA-DV-5566 4b2ec8aa-8460-440e-b75b-6b92ae7a3ffc female alive C64.9 67 NA 1398 NA Included Kidney-RCC KIRC US 0 45.99 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 1 119484613 231074978 1 2 4 0 0 1 1 0 0.57 0.03 1 NA 0 NA NA NA NA NA NA 77.16 100 0 0 3 NA Whitelist KIRC-US 0.68 0.12 NA 0 0.64 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 4 0.5 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 7 107096770 107248650 1 1 4 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 77.16 99.77 0 0 3 4 Whitelist KIRC-US 0.62 0.42 NA NA 0.59 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 2 0.25 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 11 69203406 69301413 1 1 4 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 77.16 99.57 0 0 4 5 Whitelist KIRC-US 0.62 0.39 NA NA 0.59 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 2 0.25 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 KIRC 0.64 3.17 Kidney-RCC NA 0 0 NA 4 KIRC-US DO18056 TCGA-CJ-5682 4c325ee1-9b8e-45d4-a0a7-e47ec1eac402 male alive C64.9 60 NA 1883 NA Included Kidney-RCC KIRC US 0 61.94 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 1 28975937 49598184 1 2 43 2 0 0 0 0 0.11 0.39 2 0.03 0 NA NA NA 7 5 5 90.14 97.03 0 0 3 4 Whitelist KIRC-US 0.54 0.63 0.03 0 0.48 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 4 0.05 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 2 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 3 1016586 4224306 1 14 43 0 0 2 0 12 0.11 0 6 0 0 6 4 6 12 4 6 90.14 53.11 43.72 0 2 1 Whitelist KIRC-US 5 0.81 0 0 0 0.48 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 16 0.19 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 4 46059064 46133352 1 1 43 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 90.14 99.99 0 0 3 4 Whitelist KIRC-US 0.62 0.62 NA NA 0.59 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 2 0.02 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 5 98181998 102150893 2 15 43 0 1 1 0 13 0.57 0 16 0 0 16 6 10 24 6 10 90.14 99.8 0.05 1 4 6 Whitelist KIRC-US 0.68 0 0 0 0.64 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 17 0.2 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 7 3724300 69833192 1 2 43 2 0 0 0 0 0.11 1 3 NA 0.04 NA NA NA 4 3 4 90.14 97.45 0 0 4 3 Whitelist KIRC-US 0.54 1 NA 0.04 0.48 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 4 0.05 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 8 62395147 83149656 1 2 43 0 0 0 1 1 0.39 0.28 3 NA NA NA NA NA 8 6 6 90.14 67.25 29.33 0 5 4 Whitelist KIRC-US 0.68 0.52 NA NA 0.59 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 3 0.03 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 10 43952829 89988847 1 5 43 2 0 0 0 3 0.11 0.05 5 0 0 5 5 5 6 6 6 90.14 99.81 0 0 3 4 Whitelist KIRC-US 0.62 0.15 0 0 0.48 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 7 0.08 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 12 3306264 3401826 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 90.14 99.92 0 0 4 NA Whitelist KIRC-US 0.62 0.9 NA NA 0.59 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 2 0.02 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 17 57799827 57914564 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 90.14 99.98 0 0 3 4 Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 2 0.02 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 18 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 19 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 20 14813794 15357293 1 1 43 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 90.14 99.02 0 0 3 4 Whitelist KIRC-US 0.62 0.82 NA NA 0.59 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 2 0.02 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::4edff57f-4b0e-4770-beac-590da7d7232c X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 4edff57f-4b0e-4770-beac-590da7d7232c KIRC 0.38 3.9 Kidney-RCC NA 0 0 NA 4 KIRC-US DO16881 TCGA-CJ-6033 4edff57f-4b0e-4770-beac-590da7d7232c female deceased C64.9 54 224 NA NA Included Kidney-RCC KIRC US 1 7.37 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 2 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 4 NA NA 0 0 20 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.64 NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 7 63414190 63686633 3 3 20 0 0 2 1 0 0.3 0 1 0 0 NA NA NA NA NA NA 16.47 48.06 51.71 0 3 NA Whitelist KIRC-US 0.62 0 0 0 0.59 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 6 0.15 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 8 108842179 118352445 1 3 20 0 1 0 0 2 0.39 0.02 4 NA 0 4 4 4 6 6 6 16.47 77.14 22.86 0 1 2 Whitelist KIRC-US 0.87 0.07 NA 0 0.59 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 4 0.1 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 11 NA NA 0 0 20 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.48 NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 14 22856409 33478497 5 5 20 1 2 1 1 0 0.9 0 4 0 0 4 4 4 12 10 10 16.47 2.15 96.93 0 1 2 Whitelist KIRC-US 0.93 0 0 0 0.92 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 10 0.25 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::577847b9-f9b6-4954-868f-3d5ab2b4f694 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 577847b9-f9b6-4954-868f-3d5ab2b4f694 KIRC 0.79 1.87 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18016 TCGA-CZ-5453 577847b9-f9b6-4954-868f-3d5ab2b4f694 male alive C64.9 67 NA 25 NA Included Kidney-RCC KIRC US 0 0.82 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 1 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 2 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 3 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 4 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 5 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 6 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 7 41484984 158377609 66 66 72 15 18 16 17 0 0.96 0 110 0 0 110 7 21 114 7 7 9.74 43.37 56.44 3 4 3 Whitelist KIRC-US 0.98 0 0 0 0.97 1 High confidence KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC With other complex events 132 0.92 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 8 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 9 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 10 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 11 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 12 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 13 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 15 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 16 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 17 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 18 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 19 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 20 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::659294b9-ded9-498a-bc00-c1d4d456aa4a X NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US 659294b9-ded9-498a-bc00-c1d4d456aa4a KIRC 0.82 1.98 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19028 TCGA-A3-3363 659294b9-ded9-498a-bc00-c1d4d456aa4a male alive C64.9 50 NA 319 NA Included Kidney-RCC KIRC US 0 10.49 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.41 NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 14 34543991 106924462 1 2 3 0 2 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 3.36 0 99.6 0 2 NA Whitelist KIRC-US 0.54 0.02 NA 0 0.48 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 4 0.67 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::7664c241-b369-4d76-9cd1-7f2bdc1d267f X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7664c241-b369-4d76-9cd1-7f2bdc1d267f KIRC 0.8 1.97 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20416 TCGA-BP-4326 7664c241-b369-4d76-9cd1-7f2bdc1d267f female alive C64.9 53 NA 1625 NA Included Kidney-RCC KIRC US 0 53.45 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.47 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.42 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.41 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.36 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 8 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.34 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 9 NA NA 0 0 3 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.29 NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::78048432-2de1-498c-9cf1-9c5bd43daa39 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 78048432-2de1-498c-9cf1-9c5bd43daa39 KIRC 0.66 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO19380 TCGA-CJ-4870 78048432-2de1-498c-9cf1-9c5bd43daa39 female alive C64.9 58 NA 1498 NA Included Kidney-RCC KIRC US 0 49.28 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 2 234082680 242668050 1 2 4 0 0 1 0 1 0.39 0.04 3 NA NA NA NA NA 4 4 4 14.22 0.39 99.52 0 1 2 Whitelist KIRC-US 0.68 0.13 NA NA 0.59 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 3 0.38 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.49 NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 4 NA NA 0 0 4 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.48 NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 10 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.39 NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::781acafa-a58b-4180-bbca-c5b675d51b17 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 781acafa-a58b-4180-bbca-c5b675d51b17 KIRC 0.62 1.95 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18671 TCGA-BP-5168 781acafa-a58b-4180-bbca-c5b675d51b17 male deceased C64.9 75 1463 NA NA Included Kidney-RCC KIRC US 1 48.12 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 1 NA NA 0 0 9 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.76 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 2 NA NA 0 0 9 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.39 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 3 81473596 157697169 1 1 9 0 0 0 1 0 0.39 0.13 2 NA 0 NA NA NA NA NA NA 10.18 61.46 38.49 0 2 3 Whitelist KIRC-US 0.62 0.32 NA 0 0.59 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 2 0.11 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 6 NA NA 0 0 9 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.68 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 8 NA NA 0 0 9 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.21 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 10 NA NA 0 0 9 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.19 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 12 NA NA 0 0 9 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.19 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 14 NA NA 0 0 9 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.11 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 19 NA NA 0 0 9 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.37 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 20 NA NA 0 0 9 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.39 NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::7ca06dbe-f073-4aee-86ff-a545fad5ea93 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 7ca06dbe-f073-4aee-86ff-a545fad5ea93 KIRC 0.77 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO20604 TCGA-CJ-4878 7ca06dbe-f073-4aee-86ff-a545fad5ea93 female alive C64.9 71 NA 2186 NA Included Kidney-RCC KIRC US 0 71.91 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 1 72120077 119266975 1 4 37 3 1 0 0 0 0.11 0.53 1 0 0 NA NA NA NA NA NA 18.86 0.8 99.2 0 2 NA Whitelist KIRC-US 0.54 0.76 0 0 0.48 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 8 0.11 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 2 167407256 187804416 1 2 37 1 1 0 0 0 0.57 0.24 1 0.01 0 NA NA NA NA NA NA 18.86 0 99.88 0 2 NA Whitelist KIRC-US 0.68 0.47 0.01 0 0.64 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 4 0.05 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 3 123220623 137610208 1 6 37 0 1 1 1 3 0.8 0.01 7 0 0 7 5 7 8 5 5 18.86 96.9 2.96 0 2 1 Whitelist KIRC-US 0.68 0.06 0 0 0.84 0 High confidence KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC Canonical without polyploidization 9 0.12 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 False negative; manually included KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 4 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 5 1225504 1307331 2 2 37 0 0 1 1 0 0.57 0.29 1 0.04 0 NA NA NA NA NA NA 18.86 0 99.86 0 2 NA Whitelist KIRC-US 0.68 0.54 0.04 0 0.64 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 4 0.05 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 6 84908933 89635190 3 3 37 0 1 1 1 0 0.8 0 6 0 0 6 6 6 10 7 7 18.86 48.35 51.4 0 1 2 Whitelist KIRC-US 0.87 0.01 0 0 0.84 0 High confidence KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC Canonical without polyploidization 6 0.08 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 False negative; manually included KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 7 34269444 34864914 1 1 37 1 0 0 0 0 0.39 0.14 2 0.03 NA NA NA NA 6 4 4 18.86 97.02 0.2 0 3 4 Whitelist KIRC-US 0.62 0.33 0.03 NA 0.59 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 8 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 9 NA NA 0 0 37 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.39 NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 10 NA NA 0 0 37 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.89 NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 11 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 13 107508695 107593455 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.86 0 85.85 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 16 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 17 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 1 NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 20 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 22 41305025 42036419 1 2 37 0 0 1 1 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 18.86 0 76.22 0 2 NA Whitelist KIRC-US 0.68 0.21 NA 0 0.64 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 4 0.05 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::80c4fc5b-dc7d-4308-8c81-6e83625963b5 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 80c4fc5b-dc7d-4308-8c81-6e83625963b5 KIRC 0.79 1.96 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18392 TCGA-BP-4781 80c4fc5b-dc7d-4308-8c81-6e83625963b5 male alive C64.9 78 NA 2080 NA Included Kidney-RCC KIRC US 0 68.42 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 1 72260838 72525582 2 2 18 2 0 0 0 0 0.11 0.65 4 NA 0 4 3 4 5 3 3 40.48 0.09 99.91 0 1 0 Whitelist KIRC-US 0.54 0.86 NA 0 0.48 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 4 0.11 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 2 141848229 142142370 2 2 18 2 0 0 0 0 0.11 0.66 4 NA 0 4 3 4 5 3 3 40.48 0.12 99.77 0 1 0 Whitelist KIRC-US 0.54 0.87 NA 0 0.48 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 4 0.11 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 3 96540718 96576154 1 1 18 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 40.48 99.83 0 0 1 NA Whitelist KIRC-US 0.62 0.32 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 2 0.06 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 4 28556751 181770955 1 2 18 1 1 0 0 0 0.57 0.12 3 0 0 NA NA NA NA NA NA 40.48 0.08 99.9 0 2 1 Whitelist KIRC-US 0.68 0.3 0 0 0.64 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 4 0.11 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 5 58861692 58912654 1 1 18 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 40.48 99.87 0 0 3 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 2 0.06 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 6 147903138 148100217 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 40.48 0.12 99.65 0 1 2 Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 2 0.06 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 7 NA NA 0 0 18 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.49 NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 8 36307641 36659483 1 2 18 0 1 0 0 1 0.39 0.23 2 NA NA NA NA NA NA NA NA 40.48 24.9 74.95 0 2 3 Whitelist KIRC-US 0.68 0.47 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 3 0.08 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 10 NA NA 0 0 18 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.8 NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 13 103126827 103277011 1 1 18 1 0 0 0 0 0.39 0.47 1 NA NA NA NA NA NA NA NA 40.48 85.85 0 0 1 NA Whitelist KIRC-US 0.62 0.71 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 2 0.06 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 16 56821687 56858079 1 1 18 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 40.48 0.04 99.85 0 2 3 Whitelist KIRC-US 0.62 0.63 NA NA 0.59 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 2 0.06 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 18 NA NA 0 0 18 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.63 NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::8aaa4e25-5c12-4ace-96dc-91aaa0c4457c X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c KIRC 0.68 1.97 Kidney-RCC NA 0 0 NA 3 KIRC-US DO16769 TCGA-B0-5094 8aaa4e25-5c12-4ace-96dc-91aaa0c4457c male deceased C64.9 62 333 NA NA Included Kidney-RCC KIRC US 1 10.95 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 3 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.01 NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::900b5f21-e8fb-4a3f-b8e3-ef098716e508 X 86424790 88625390 1 3 4 0 0 1 0 2 0.39 0 3 NA 0 NA NA NA 4 4 4 10.72 43.47 56.53 0 1 2 Whitelist KIRC-US 0.87 0 NA 0 0.59 0 No KIRC-US 900b5f21-e8fb-4a3f-b8e3-ef098716e508 KIRC 0.4 2 Kidney-RCC NA 4 0.5 NA 2 KIRC-US DO16233 TCGA-CJ-4899 900b5f21-e8fb-4a3f-b8e3-ef098716e508 male alive C64.9 42 NA 1528 NA Included Kidney-RCC KIRC US 0 50.26 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 3 NA NA 0 0 12 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.43 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 4 NA NA 0 0 12 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.79 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 5 NA NA 0 0 12 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.77 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 8 55789211 57665876 3 4 12 0 0 1 2 1 0.3 0 5 0 0 5 5 5 6 6 6 11.06 38.77 61.23 0 2 1 Whitelist KIRC-US 0.68 0.01 0 0 0.59 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 7 0.29 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 9 NA NA 0 0 12 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.22 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 11 28165280 29087215 2 2 12 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 11.06 0 99.43 0 2 NA Whitelist KIRC-US 0.68 0.07 0 0 0.64 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 4 0.17 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 12 NA NA 0 0 12 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.69 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 14 NA NA 0 0 12 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.57 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 19 NA NA 0 0 12 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.44 NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9b84d013-713b-4571-888c-12863fdd4a52 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9b84d013-713b-4571-888c-12863fdd4a52 KIRC 0.77 1.9 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16999 TCGA-BP-4327 9b84d013-713b-4571-888c-12863fdd4a52 female deceased C64.9 75 109 NA NA Included Kidney-RCC KIRC US 1 3.59 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 3 52547086 64671845 1 11 15 0 1 0 1 9 0.57 0 7 0 0 7 7 7 8 8 8 5.54 31.16 68.71 0 1 2 Whitelist KIRC-US 0.98 0 0 0 0.64 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 13 0.43 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 13 NA NA 0 0 15 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.25 NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9da334ed-314c-4445-ba29-ffd9bb42403c X NA NA 0 0 15 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist KIRC-US NA 0 0 NA NA 0 No KIRC-US 9da334ed-314c-4445-ba29-ffd9bb42403c KIRC 0.71 1.92 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16136 TCGA-AK-3428 9da334ed-314c-4445-ba29-ffd9bb42403c male alive C64.9 62 NA 2223 NA Included Kidney-RCC KIRC US 0 73.12 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 1 41896412 46803459 1 1 29 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.34 0 100 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 2 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 3 69347452 79317001 2 3 29 1 0 0 1 1 0.57 0.01 5 0 0 5 5 5 8 8 8 12.34 39.8 60.15 0 2 1 Whitelist KIRC-US 0.62 0.06 0 0 0.64 0 High confidence KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC Canonical without polyploidization 5 0.09 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 False negative; manually included KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 4 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.9 NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 5 105549530 128537490 1 4 29 1 0 1 0 2 0.57 0.01 6 0 0 6 6 6 8 8 8 12.34 34.7 65.17 0 2 3 Whitelist KIRC-US 3 0.68 0.04 0 0 0.64 0 High confidence KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC Canonical without polyploidization 6 0.1 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 False negative; manually included KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 6 36486218 36548002 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.34 0 99.85 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 7 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 8 68278415 90943123 1 2 29 1 1 0 0 0 0.57 0.06 1 0 0 NA NA NA NA NA NA 12.34 0 99.99 0 2 NA Whitelist KIRC-US 0.68 0.18 0 0 0.64 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 4 0.07 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 9 33632356 75821493 1 2 29 1 1 0 0 0 0.57 0.31 1 NA 0 NA NA NA NA NA NA 12.34 0 99.29 0 2 NA Whitelist KIRC-US 0.68 0.57 NA 0 0.64 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 4 0.07 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 10 NA NA 0 0 29 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.63 NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 12 40570403 40635327 1 1 29 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.34 0 99.92 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 14 74208248 74343856 1 1 29 1 0 0 0 0 0.39 0.06 1 0 NA NA NA NA NA NA NA 12.34 84.08 0 0 1 NA Whitelist KIRC-US 0.62 0.19 0 NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 15 64654306 64684419 1 1 29 0 1 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 12.34 0 84.59 0 2 NA Whitelist KIRC-US 0.62 0.78 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 16 50075075 50226151 1 1 29 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 12.34 0 99.89 0 2 NA Whitelist KIRC-US 0.62 0.77 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 17 NA NA 0 0 29 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.78 NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 18 56155238 56243809 1 1 29 0 0 1 0 0 0.39 0.18 2 NA NA NA NA NA 4 4 4 12.34 0.19 99.78 0 1 2 Whitelist KIRC-US 0.62 0.4 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 19 18450705 18465285 1 1 29 0 0 0 1 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 12.34 0 99.83 0 2 NA Whitelist KIRC-US 0.62 0.29 NA NA 0.59 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 2 0.03 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9dc7812b-c7a2-4de4-bf6d-4c7261384a62 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 KIRC 0.49 1.89 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17323 TCGA-A3-3387 9dc7812b-c7a2-4de4-bf6d-4c7261384a62 male alive C64.9 49 NA 617 NA Included Kidney-RCC KIRC US 0 20.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 1 NA NA 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0 NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 12 34185174 38720546 1 1 5 1 0 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 24.07 0 99.92 0 2 NA Whitelist KIRC-US 0.62 0.44 NA NA 0.59 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 2 0.2 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 17 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.03 NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9ecdde9c-2179-4830-bd10-c4fa40f26066 X NA NA 0 0 5 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.09 NA NA NA 0 No KIRC-US 9ecdde9c-2179-4830-bd10-c4fa40f26066 KIRC 0.84 2.2 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18164 TCGA-BP-4756 9ecdde9c-2179-4830-bd10-c4fa40f26066 female alive C64.9 62 NA 374 NA Included Kidney-RCC KIRC US 0 12.3 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 5 1301359 1566521 1 1 7 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 13.93 0.15 99.72 0 1 2 Whitelist KIRC-US 0.62 0.62 NA NA 0.59 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 2 0.14 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.55 NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 12 NA NA 0 0 7 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.14 NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 17 63763819 63861869 1 1 7 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 13.93 0.12 99.86 0 1 2 Whitelist KIRC-US 0.62 0.39 NA NA 0.59 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 2 0.14 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 19 NA NA 0 0 7 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.32 NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 22 NA NA 0 0 7 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.23 NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::9f5c0a43-d222-484a-9249-d288387dd7a1 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US 9f5c0a43-d222-484a-9249-d288387dd7a1 KIRC 0.4 1.84 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17751 TCGA-BP-5010 9f5c0a43-d222-484a-9249-d288387dd7a1 male deceased C64.9 63 878 NA NA Included Kidney-RCC KIRC US 1 28.88 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 3 NA NA 0 0 15 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 6 6 0 0 0 0 0 0 Whitelist KIRC-US NA 0 0 NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 5 86939720 123103947 7 13 15 0 4 1 2 6 0.17 0 14 0 0 14 8 14 16 9 9 12.75 51.74 48.13 0 3 4 Whitelist KIRC-US 0.62 0 0 0 0.59 1 High confidence KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC With other complex events 20 0.67 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 10 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.75 NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbbce1ba-c739-43ba-b9cf-a4f746491ae3 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US bbbce1ba-c739-43ba-b9cf-a4f746491ae3 KIRC 0.48 1.91 Kidney-RCC NA 0 0 NA 2 KIRC-US DO18839 TCGA-B2-4102 bbbce1ba-c739-43ba-b9cf-a4f746491ae3 male alive C64.9 61 NA 15 NA Included Kidney-RCC KIRC US 0 0.49 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 1 6236826 241091210 1 2 22 2 0 0 0 0 0.11 0.69 5 NA 0.05 5 5 5 5 5 5 26.19 11.31 85.72 0 2 1 Whitelist KIRC-US 0.54 0.89 NA 0.05 0.48 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 4 0.09 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 2 10363312 31159120 2 2 22 1 1 0 0 0 0.57 0.43 4 NA 0 4 3 4 5 3 3 26.19 0.05 99.86 3 2 1 Whitelist KIRC-US 0.68 0.68 NA 0 0.64 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 4 0.09 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 5 143116564 157564577 1 2 22 2 0 0 0 0 0.11 0.65 3 NA 0 NA NA NA NA NA NA 26.19 0.07 99.8 0 2 1 Whitelist KIRC-US 0.54 0.86 NA 0 0.48 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 4 0.09 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 6 132551503 132596255 1 1 22 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.19 0 99.85 0 2 NA Whitelist KIRC-US 0.62 1 NA NA 0.59 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 2 0.05 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 7 38293028 38402462 2 2 22 2 0 0 0 0 0.11 0.11 4 0 0 4 0 3 5 0 0 26.19 99.77 0 0 3 0 Whitelist KIRC-US 0.54 0.29 0 0 0.48 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 4 0.09 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 9 21841904 21988078 1 1 22 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 5 3 3 26.19 10.57 89.26 0 0 1 Whitelist KIRC-US 0.62 0.81 NA NA 0.59 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 2 0.05 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 14 22321184 22979957 3 3 22 3 0 0 0 0 0.03 0 3 0 0 NA NA NA 4 0 3 26.19 99.08 0 0 0 1 Whitelist KIRC-US 0.41 0 0 0 0.33 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 6 0.14 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 15 62359578 63145890 1 2 22 0 1 0 0 1 0.39 0 1 0 NA NA NA NA NA NA NA 26.19 48.54 51.33 0 2 NA Whitelist KIRC-US 0.68 0 0 NA 0.59 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 3 0.07 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 20 35961082 50025402 1 1 22 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.19 52.12 40.56 0 3 NA Whitelist KIRC-US 0.62 0.01 NA NA 0.59 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 2 0.05 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::bbdaa931-e922-49be-bfbf-fa0c2ae27d7a X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US bbdaa931-e922-49be-bfbf-fa0c2ae27d7a KIRC 0.24 2 Kidney-RCC NA 0 0 NA 3 KIRC-US DO20082 TCGA-CW-6087 bbdaa931-e922-49be-bfbf-fa0c2ae27d7a male deceased C64.9 61 41 NA NA Included Kidney-RCC KIRC US 1 1.35 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 3 180058170 180079861 1 1 6 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 82.95 60.56 39.39 0 2 3 Whitelist KIRC-US 0.62 0 NA NA 0.59 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 2 0.17 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 4 NA NA 0 0 6 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.59 NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 5 NA NA 0 0 6 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.16 NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.49 NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 0 0 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cc353686-e2b6-46a1-8095-48e2bc44b11f X 53173510 53266222 1 1 6 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 82.95 0.06 99.94 0 0 2 Whitelist KIRC-US 0.62 0.51 NA NA 0.59 0 No KIRC-US cc353686-e2b6-46a1-8095-48e2bc44b11f KIRC 0.61 3.03 Kidney-RCC NA 2 0.17 NA 4 KIRC-US DO17848 TCGA-BP-4977 cc353686-e2b6-46a1-8095-48e2bc44b11f male alive C64.9 57 NA 454 NA Included Kidney-RCC KIRC US 0 14.93 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 3 57871531 60252233 1 2 3 0 0 0 1 1 0.39 0.01 3 NA NA NA NA NA 4 4 4 9.61 29.43 70.44 0 2 1 Whitelist KIRC-US 0.68 0.06 NA NA 0.59 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 3 0.5 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.39 NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 6 NA NA 0 0 3 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.38 NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::cfc999aa-802e-4a0d-8b14-be2b19fa2a17 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US cfc999aa-802e-4a0d-8b14-be2b19fa2a17 KIRC 0.48 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO16113 TCGA-B2-4101 cfc999aa-802e-4a0d-8b14-be2b19fa2a17 male alive C64.9 52 NA 90 NA Included Kidney-RCC KIRC US 0 2.96 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 2 148510874 160670122 3 7 9 0 1 1 1 4 0.8 0 8 0 0 8 8 8 9 9 9 8.21 3.95 95.95 0 2 3 Whitelist KIRC-US 0.96 0 0 0 0.84 1 High confidence KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC Canonical without polyploidization 10 0.56 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 3 NA NA 0 0 9 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.72 NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 5 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.07 NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 8 130779311 130789533 1 1 9 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 8.21 0 99.99 0 2 NA Whitelist KIRC-US 0.62 0.63 NA NA 0.59 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 2 0.11 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 10 21832499 22013519 1 1 9 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 8.21 0.13 99.68 0 1 2 Whitelist KIRC-US 0.62 0.6 NA NA 0.59 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 2 0.11 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::db058eb4-9c5e-4226-92d1-de24aea83630 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 1 No KIRC-US db058eb4-9c5e-4226-92d1-de24aea83630 KIRC 0.64 2.03 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17722 TCGA-B0-5693 db058eb4-9c5e-4226-92d1-de24aea83630 female alive C64.9 47 NA 1852 NA Included Kidney-RCC KIRC US 0 60.92 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 1 164759358 180114773 1 5 5 1 0 1 0 3 0.57 0 6 0 0 6 6 6 7 7 7 17.29 10.39 89.61 0 2 3 Whitelist KIRC-US 0.93 0 0 0 0.64 0 High confidence KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC Canonical without polyploidization 7 0.7 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 False negative; manually included KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 3 0 198022430 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist KIRC-US NA 0.02 NA NA NA 0 High confidence KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC Canonical without polyploidization 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 False negative; manually included KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f2801b21-5444-4cc3-a642-c60c6d82cd3d X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f2801b21-5444-4cc3-a642-c60c6d82cd3d KIRC 0.77 2.01 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17085 TCGA-CZ-5454 f2801b21-5444-4cc3-a642-c60c6d82cd3d male deceased C64.9 63 722 NA NA Included Kidney-RCC KIRC US 1 23.75 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 5 128912439 128924250 1 1 3 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 28.82 0 99.85 0 2 NA Whitelist KIRC-US 0.62 0.39 NA NA 0.59 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 2 0.33 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 8 115618954 115703602 2 2 3 0 0 1 1 0 0.57 0.01 3 NA 0 NA NA NA NA NA NA 28.82 0.03 99.96 0 2 1 Whitelist KIRC-US 0.68 0.04 NA 0 0.64 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 4 0.67 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::f5759059-c0e3-4f1a-af96-5c7197d3c33c X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US f5759059-c0e3-4f1a-af96-5c7197d3c33c KIRC 0.69 1.77 Kidney-RCC NA 0 0 NA 3 KIRC-US DO18701 TCGA-CZ-5987 f5759059-c0e3-4f1a-af96-5c7197d3c33c male deceased C64.9 60 445 NA NA Included Kidney-RCC KIRC US 1 14.64 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.55 NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.48 NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 8 NA NA 0 0 5 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.46 NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 9 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.06 NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 16 48021879 58148862 2 2 5 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 5.96 0 99.89 0 2 NA Whitelist KIRC-US 0.68 0.03 NA 0 0.64 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 4 0.4 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 19 NA NA 0 0 5 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA 0.26 NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRC-US::fb9bafa5-7133-4955-8156-4eb6763dc8e1 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRC-US NA NA NA NA NA 0 No KIRC-US fb9bafa5-7133-4955-8156-4eb6763dc8e1 KIRC 0.74 1.94 Kidney-RCC NA 0 0 NA 2 KIRC-US DO17054 TCGA-B0-5695 fb9bafa5-7133-4955-8156-4eb6763dc8e1 female alive C64.9 61 NA 1042 NA Included Kidney-RCC KIRC US 0 34.28 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 5 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.02 NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.51 NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 10 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.01 NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 16 538594 89363588 1 4 6 0 0 0 1 3 0.39 0 3 NA 0.02 NA NA NA NA NA NA 4.17 47.54 51.27 0 1 2 Whitelist KIRP-US 0.68 0 NA 0.02 0.59 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 5 0.42 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::0c151271-2cf9-43f4-9e9b-fe927de43131 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 0c151271-2cf9-43f4-9e9b-fe927de43131 KIRP 0.81 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44478 TCGA-IA-A40X 0c151271-2cf9-43f4-9e9b-fe927de43131 female alive C64.1 49 NA 430 NA Included Kidney-RCC KIRP US 0 14.14 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 1 NA NA 0 0 77 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 0 NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 2 27576496 193727758 1 5 77 3 0 0 0 2 0.03 0.3 3 0 0 NA NA NA 4 4 4 59.64 99.9 0 0 4 5 Whitelist KIRP-US 0.62 0.55 0 0 0.33 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 8 0.05 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 3 67735761 162693353 1 3 77 2 0 0 1 0 0.3 0.5 3 0 0 NA NA NA 9 4 4 59.64 52.58 44.36 0 2 3 Whitelist KIRP-US 0.62 0.74 0 0 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 6 0.04 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 4 91853512 96971602 1 2 77 2 0 0 0 0 0.11 0.82 3 0 0 NA NA NA NA NA NA 59.64 0.01 99.78 0 2 1 Whitelist KIRP-US 0.54 0.96 0 0 0.48 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 4 0.03 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 5 57675350 57698685 1 1 77 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 4 3 3 59.64 99.85 0 0 4 NA Whitelist KIRP-US 0.62 1 0 NA 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 2 0.01 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 6 26092614 26188852 1 1 77 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 6 3 3 59.64 85.09 14.72 0 3 4 Whitelist KIRP-US 0.62 0.46 0 NA 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 2 0.01 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 7 13319120 146742016 1 3 77 1 1 1 0 0 0.8 0.61 4 0 0 4 4 4 5 5 5 59.64 99.77 0 0 3 4 Whitelist KIRP-US 0.87 0.82 0 0 0.84 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 6 0.04 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 8 90629419 125279264 1 4 77 2 1 0 0 1 0.3 0.11 1 0 0 NA NA NA NA NA NA 59.64 99.99 0 0 4 NA Whitelist KIRP-US 0.54 0.29 0 0 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 7 0.05 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 9 8944480 22001879 1 2 77 2 0 0 0 0 0.11 0.55 1 0.04 0 NA NA NA NA NA NA 59.64 24.46 72.93 0 1 NA Whitelist KIRP-US 0.54 0.77 0.04 0 0.48 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 4 0.03 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 10 110149037 110333404 1 1 77 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 4 4 59.64 91.93 7.9 0 2 3 Whitelist KIRP-US 0.62 0.81 NA NA 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 2 0.01 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 11 NA NA 0 0 77 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.51 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 12 NA NA 0 0 77 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist KIRP-US NA 0.26 0 NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 13 NA NA 0 0 77 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist KIRP-US NA 0.07 0 NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 14 NA NA 0 0 77 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist KIRP-US NA 0.91 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 15 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 16 NA NA 0 0 77 0 0 0 0 0 NA 0.15 NA 0.12 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist KIRP-US NA 0.35 0.12 NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 17 NA NA 0 0 77 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 18 NA NA 0 0 77 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.9 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 19 8280150 8291056 1 1 77 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 59.64 99.83 0 0 3 NA Whitelist KIRP-US 0.62 0.2 0 NA 0.59 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 2 0.01 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 20 NA NA 0 0 77 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 21 NA NA 0 0 77 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.21 0 NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 22 NA NA 0 0 77 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.82 NA NA NA 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::1db41963-a520-47f0-828c-ed5c626507b1 X 2842634 142531355 1 4 77 4 0 0 0 0 0.01 0.8 5 0 0 5 5 5 5 5 5 59.64 0.05 99.63 0 2 1 Whitelist KIRP-US 0.21 0.95 0 0 0.16 0 No KIRP-US 1db41963-a520-47f0-828c-ed5c626507b1 KIRP 0.77 3.07 Kidney-RCC NA 8 0.05 NA 4 KIRP-US DO44462 TCGA-IA-A40Y 1db41963-a520-47f0-828c-ed5c626507b1 female alive C64.1 60 NA 62 NA Included Kidney-RCC KIRP US 0 2.04 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.49 NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 6 158632251 163575318 1 4 4 1 0 1 1 1 0.8 0 4 0 0 4 4 4 5 5 5 30.33 0.35 99.51 0 1 2 Whitelist KIRP-US 1 0 0 0 0.84 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 7 0.88 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2030e10b-a4c2-460f-9e29-90c8a76ea05e X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2030e10b-a4c2-460f-9e29-90c8a76ea05e KIRP 0.7 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48516 TCGA-MH-A55W 2030e10b-a4c2-460f-9e29-90c8a76ea05e male alive C64.1 50 NA 398 NA Included Kidney-RCC KIRP US 0 13.09 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 2 236849093 236860376 1 1 2 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 33.53 0 99.9 0 2 NA Whitelist KIRP-US 0.62 0.37 NA NA 0.59 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 2 0.5 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 5 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.31 NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2272c592-b9b6-4483-9f7f-6e185699b900 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2272c592-b9b6-4483-9f7f-6e185699b900 KIRP 0.91 2.26 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20839 TCGA-AL-3468 2272c592-b9b6-4483-9f7f-6e185699b900 male alive C64.1 74 NA 1636 NA Included Kidney-RCC KIRP US 0 53.82 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 10 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.15 NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::2c084454-18e9-4837-9bba-7e91a73a48e0 X NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.16 NA NA NA 0 No KIRP-US 2c084454-18e9-4837-9bba-7e91a73a48e0 KIRP 0.34 2.15 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44520 TCGA-GL-A4EM 2c084454-18e9-4837-9bba-7e91a73a48e0 male alive C64.1 61 NA 32 NA Included Kidney-RCC KIRP US 0 1.05 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 2 22092023 22168471 1 1 3 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 35.78 99.91 0 0 3 NA Whitelist KIRP-US 0.62 0.47 NA NA 0.59 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 4 69749738 69862875 1 1 3 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 35.78 0 99.98 0 2 NA Whitelist KIRP-US 0.62 0.41 NA NA 0.59 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 20 23686507 23749093 1 1 3 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 35.78 40.59 52.41 0 3 NA Whitelist KIRP-US 0.62 0.19 NA NA 0.59 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::36b46540-472f-4a4d-a801-b8b6ae660dc9 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 36b46540-472f-4a4d-a801-b8b6ae660dc9 KIRP 0.38 2.25 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44515 TCGA-HE-A5NF 36b46540-472f-4a4d-a801-b8b6ae660dc9 male alive C64.1 58 NA 2072 NA Included Kidney-RCC KIRP US 0 68.16 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 1 16238100 226407354 1 3 78 1 2 0 0 0 0.3 0.83 2 0.15 0 NA NA NA 4 4 4 13.04 9.66 90.34 0 1 2 Whitelist KIRP-US 0.62 0.97 0.15 0 0.59 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 6 0.04 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 2 26515734 219322731 1 3 78 0 3 0 0 0 0.03 0.22 1 0.02 0 NA NA NA NA NA NA 13.04 0 99.9 0 2 NA Whitelist KIRP-US 0.41 0.45 0.02 0 0.33 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 6 0.04 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 3 116494293 116546538 1 1 78 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 13.04 0 99.86 0 2 NA Whitelist KIRP-US 0.62 0.15 NA NA 0.59 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 2 0.01 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 4 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 5 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 6 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 7 85764754 138776191 43 45 78 16 9 10 8 2 0.31 0 93 0 0 93 14 16 94 14 15 13.04 28.45 71.32 0 7 8 Whitelist KIRP-US 0.64 0 0 0 0.59 1 High confidence KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC With other complex events 88 0.56 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 8 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 9 21782792 21987519 1 1 78 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 13.04 31.01 68.29 0 1 NA Whitelist KIRP-US 0.62 0.93 NA NA 0.59 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 2 0.01 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 10 NA NA 0 0 78 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.81 NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 11 NA NA 0 0 78 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.94 NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 12 53467092 53492567 1 1 78 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 13.04 0 99.92 0 2 NA Whitelist KIRP-US 0.62 0.81 NA NA 0.59 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 2 0.01 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 13 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 14 NA NA 0 0 78 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.76 NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 15 63672042 85886958 1 2 78 0 2 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 13.04 0 99.88 0 2 NA Whitelist KIRP-US 0.54 1 NA 0 0.48 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 4 0.03 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 16 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 17 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 18 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 19 56109956 56152037 1 1 78 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.04 0.07 99.55 0 1 2 Whitelist KIRP-US 0.62 1 NA NA 0.59 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 2 0.01 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 20 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 22 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::4edd92e1-5da5-49a3-80e4-fa456aa425b8 X NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 1 No KIRP-US 4edd92e1-5da5-49a3-80e4-fa456aa425b8 KIRP 0.76 1.99 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20849 TCGA-B9-4116 4edd92e1-5da5-49a3-80e4-fa456aa425b8 female alive C64.1 75 NA 93 NA Included Kidney-RCC KIRP US 0 3.06 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 7 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.27 NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 19 46699422 46765102 1 1 2 0 0 0 1 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 17.1 0 99.83 0 2 NA Whitelist KIRP-US 0.62 0.14 NA NA 0.59 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 2 0.5 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::5c9a6c40-982e-45c7-98d3-aeb6cad16986 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 5c9a6c40-982e-45c7-98d3-aeb6cad16986 KIRP 0.73 2.11 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20780 TCGA-B9-4113 5c9a6c40-982e-45c7-98d3-aeb6cad16986 male deceased C64.1 64 1536 NA NA Included Kidney-RCC KIRP US 1 50.53 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 5 2770230 19317490 2 2 3 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 3.92 0 99.86 0 2 NA Whitelist KIRP-US 0.68 0.05 NA 0 0.64 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 4 0.67 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 8 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist KIRP-US NA 0.34 NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 21 NA NA 0 0 3 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.13 NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::6a6c1569-1045-4ed3-acdb-5c45e47614ca X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 6a6c1569-1045-4ed3-acdb-5c45e47614ca KIRP 0.89 2.04 Kidney-RCC NA 0 0 NA 2 KIRP-US DO51551 TCGA-B1-A47O 6a6c1569-1045-4ed3-acdb-5c45e47614ca female alive C64.1 54 NA 147 NA Included Kidney-RCC KIRP US 0 4.84 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 2 NA NA 0 0 9 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist KIRP-US NA 0.39 NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 7 NA NA 0 0 9 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.23 NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 8 NA NA 0 0 9 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist KIRP-US NA 0.21 NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 12 NA NA 0 0 9 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.19 NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 14 26354052 63176337 2 2 9 0 1 1 0 0 0.57 0 3 NA 0 NA NA NA 8 7 8 47.4 31.06 53.02 1 2 3 Whitelist KIRP-US 0.68 0.01 NA 0 0.64 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 4 0.22 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 17 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0 NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::71b35cd8-ecee-4599-bb24-b1ef78118423 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 71b35cd8-ecee-4599-bb24-b1ef78118423 KIRP 0.7 2.62 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20770 TCGA-B9-4117 71b35cd8-ecee-4599-bb24-b1ef78118423 female alive C64.1 48 NA 14 NA Included Kidney-RCC KIRP US 0 0.46 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 2 NA NA 0 0 7 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.29 NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.64 NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 4 NA NA 0 0 7 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.22 NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 9 33613804 33796800 1 1 7 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 16.9 0 99.86 0 2 NA Whitelist KIRP-US 0.62 0.11 NA NA 0.59 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 2 0.14 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 11 NA NA 0 0 7 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0 NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 12 10151300 10191476 1 1 7 0 0 0 1 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 16.9 99.92 0 0 3 NA Whitelist KIRP-US 0.62 0.53 NA NA 0.59 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 2 0.14 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::78412f82-cc55-43d5-96ca-1d02cf957725 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 78412f82-cc55-43d5-96ca-1d02cf957725 KIRP 0.84 2.06 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44525 TCGA-GL-A59R 78412f82-cc55-43d5-96ca-1d02cf957725 male alive C64.1 79 NA 203 NA Included Kidney-RCC KIRP US 0 6.68 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 7 49899235 72274568 2 2 3 0 0 1 1 0 0.57 0.01 3 NA 0 NA NA NA NA NA NA 29.88 99.74 0 0 4 3 Whitelist KIRP-US 0.68 0.04 NA 0 0.64 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 4 0.67 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 10 39096792 39125724 1 1 3 0 0 0 1 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 29.88 0 99.82 0 2 NA Whitelist KIRP-US 0.62 0.32 NA NA 0.59 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8b3c068d-5090-4030-8e7e-39da005dee79 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8b3c068d-5090-4030-8e7e-39da005dee79 KIRP 0.78 2.34 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44465 TCGA-A4-A4ZT 8b3c068d-5090-4030-8e7e-39da005dee79 female alive C64.1 71 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 2 128149067 128174976 1 1 8 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 18.72 0 99.89 0 2 NA Whitelist KIRP-US 0.62 0.75 NA NA 0.59 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 2 0.12 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 16 34274987 75999811 1 2 8 2 0 0 0 0 0.11 0 5 NA 0 5 5 5 6 6 6 18.72 38.41 56.72 0 3 2 Whitelist KIRP-US 0.54 0.01 NA 0 0.48 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 4 0.25 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 17 14976725 20614564 3 3 8 1 0 1 1 0 0.8 0 2 0 0 NA NA NA 4 4 4 18.72 68.32 26.74 0 2 3 Whitelist KIRP-US 0.87 0 0 0 0.84 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 6 0.38 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::8d28f586-3de5-4033-a9fd-4f67be406fb4 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 8d28f586-3de5-4033-a9fd-4f67be406fb4 KIRP 0.81 2.1 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49768 TCGA-HE-A5NJ 8d28f586-3de5-4033-a9fd-4f67be406fb4 male alive C64.1 58 NA 1726 NA Included Kidney-RCC KIRP US 0 56.78 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 2 116277413 116314161 1 1 4 0 0 1 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 19.9 0.02 99.9 0 2 3 Whitelist KIRP-US 0.62 0.13 NA NA 0.59 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 2 0.25 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 5 30160774 161999436 2 2 4 1 1 0 0 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 19.9 99.88 0 0 3 NA Whitelist KIRP-US 0.68 0.09 NA 0 0.64 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 4 0.5 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::925ae8ff-3200-4564-be76-94db0984b027 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 925ae8ff-3200-4564-be76-94db0984b027 KIRP 0.54 2.09 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44469 TCGA-A4-A48D 925ae8ff-3200-4564-be76-94db0984b027 male alive C64.1 84 NA 1 NA Included Kidney-RCC KIRP US 0 0.03 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 17 NA NA 0 0 1 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.1 NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::98a639c2-d615-4dc1-98f0-298752b69b09 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US 98a639c2-d615-4dc1-98f0-298752b69b09 KIRP 0.81 2.02 Kidney-RCC NA 0 0 NA 2 KIRP-US DO44485 TCGA-HE-A5NH 98a639c2-d615-4dc1-98f0-298752b69b09 male alive C64.1 62 NA 408 NA Included Kidney-RCC KIRP US 0 13.42 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 1 16262047 193109990 1 11 166 4 2 0 0 5 0.06 0.67 18 0 0 18 5 8 18 5 6 77.38 69.92 30.08 0 4 6 Whitelist KIRP-US 19 0.49 0.87 0 0 0.48 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 17 0.05 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 2 141474807 142430358 6 6 166 6 0 0 0 0 0 0 17 0 0 17 5 10 50 5 7 77.38 97.2 0.1 0 1 2 Whitelist KIRP-US 0.04 0 0 0 0.03 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 12 0.04 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 3 10505042 131382838 1 11 166 10 1 0 0 0 0 1 15 0 0 15 11 11 16 12 12 77.38 99.32 0.56 0 3 2 Whitelist KIRP-US 0 1 0 0 0 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 22 0.07 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 4 69152238 129221201 7 8 166 2 2 2 1 1 0.93 0.08 9 0 0 9 6 9 16 8 8 77.38 99.2 0.66 0 2 3 Whitelist KIRP-US 0.87 0.24 0 0 0.95 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 15 0.05 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 5 2691911 176237045 1 11 166 5 2 0 0 4 0.02 0.42 23 0 0 23 4 8 25 4 5 77.38 81.06 16.03 0 3 4 Whitelist KIRP-US 0.34 0.67 0 0 0.33 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 18 0.05 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 6 15412763 135190429 1 4 166 2 1 0 0 1 0.3 0.14 10 0 0 10 4 5 11 4 5 77.38 97.05 0 0 4 5 Whitelist KIRP-US 0.54 0.33 0 0 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 7 0.02 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 7 69719462 82530981 3 6 166 4 0 1 1 0 0.11 0.3 20 0 0 20 6 13 25 6 6 77.38 99.07 0.7 0 3 4 Whitelist KIRP-US 0.54 0.54 0 0 0.48 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 12 0.04 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 8 67226013 95986012 1 4 166 2 2 0 0 0 0.26 0.29 6 0 0 6 3 6 8 3 3 77.38 74.07 25.8 0 4 6 Whitelist KIRP-US 0.62 0.53 0 0 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 8 0.02 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 9 19309545 78566986 1 4 166 1 1 0 1 1 0.8 1 9 0 0 9 3 6 12 3 4 77.38 76.06 23.24 0 2 3 Whitelist KIRP-US 0.68 1 0 0 0.84 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 7 0.02 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 10 5042854 5146362 2 2 166 0 0 1 1 0 0.57 0.85 3 0 0 NA NA NA 10 6 10 77.38 36.7 63.12 0 3 2 Whitelist KIRP-US 0.68 0.99 0 0 0.64 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 4 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 11 31659640 98404488 1 5 166 5 0 0 0 0 0 1 6 0 0 6 6 6 7 7 7 77.38 99.3 0.34 0 2 3 Whitelist KIRP-US 0.1 1 0 0 0.07 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 10 0.03 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 12 40156000 40271580 1 1 166 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 4 3 3 77.38 99.43 0.09 0 2 3 Whitelist KIRP-US 0.62 0.7 0 NA 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 13 NA NA 0 0 166 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.63 NA NA NA 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 14 27316528 103863751 1 5 166 3 2 0 0 0 0.14 1 7 0 0 7 5 7 7 5 5 77.38 0.15 98.94 0 2 4 Whitelist KIRP-US 0.62 1 0 0 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 10 0.03 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 15 35352484 85992912 1 4 166 2 1 0 0 1 0.3 1 3 0 0 NA NA NA 4 3 3 77.38 56.16 43.84 0 1 2 Whitelist KIRP-US 0.62 1 0 0 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 7 0.02 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 16 79013262 79245985 2 2 166 1 0 0 1 0 0.57 0 4 0 0 4 0 3 19 6 7 77.38 98.97 0.23 0 0 1 Whitelist KIRP-US 0.68 0 0 0 0.64 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 4 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 17 34246918 58495260 2 5 166 1 0 0 1 3 0.57 0.09 10 0 0 10 3 4 13 3 3 77.38 68.14 27.33 0 8 12 Whitelist KIRP-US 1 0.68 0.26 0 0 0.64 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 7 0.02 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 18 60467432 63632461 1 2 166 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 6 5 5 77.38 95.08 0.28 0 2 3 Whitelist KIRP-US 0.54 0.59 NA 0 0.48 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 4 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 19 1318231 24569785 1 7 166 2 1 1 1 2 0.9 0 10 0 0 10 7 10 13 7 7 77.38 94.07 5.76 0 3 5 Whitelist KIRP-US 0.96 0.01 0 0 0.92 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 12 0.04 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 20 14915968 15029360 1 1 166 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 77.38 98.94 0 0 3 4 Whitelist KIRP-US 0.62 1 0 NA 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 21 32574701 32863366 1 1 166 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.38 77.11 0.6 0 2 3 Whitelist KIRP-US 0.62 1 NA NA 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 22 41947331 42056552 1 1 166 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.38 0 99.66 0 2 NA Whitelist KIRP-US 0.62 1 NA NA 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 X 29093442 29245837 1 1 166 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 4 4 77.38 51.92 48.08 0 1 2 Whitelist KIRP-US 0.62 0.08 NA NA 0.59 0 No KIRP-US 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 KIRP 0.58 3.5 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO20928 TCGA-AL-3466 9fc40b03-0b56-4b1f-93ed-dbc455ae3fd9 male deceased C64.1 41 293 NA NA Included Kidney-RCC KIRP US 1 9.64 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 16 79199723 79365241 1 1 1 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 12.62 0.18 99.72 0 2 3 Whitelist KIRP-US 0.62 0.1 NA NA 0.59 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 2 1 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a121406a-30b2-4717-ae96-edcb17d911e2 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a121406a-30b2-4717-ae96-edcb17d911e2 KIRP 0.75 2.07 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20768 TCGA-B9-4115 a121406a-30b2-4717-ae96-edcb17d911e2 male alive C64.1 53 NA 329 NA Included Kidney-RCC KIRP US 0 10.82 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 3 96067463 97499729 1 1 1 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 5 5 5 35.99 99.89 0 0 3 4 Whitelist KIRP-US 0.62 0.21 NA NA 0.59 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 2 1 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a6e960af-3ca5-42fb-b546-451c2583282d X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a6e960af-3ca5-42fb-b546-451c2583282d KIRP 0.91 2.28 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20863 TCGA-B9-4617 a6e960af-3ca5-42fb-b546-451c2583282d male alive C64.1 41 NA 34 NA Included Kidney-RCC KIRP US 0 1.12 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 2 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 3 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 4 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 5 NA NA 0 0 15 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.48 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 6 NA NA 0 0 15 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.46 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 7 NA NA 0 0 15 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.41 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 8 54790872 54803159 1 1 15 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 14.01 0 99.99 0 2 NA Whitelist KIRP-US 0.62 0.77 NA NA 0.59 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 2 0.07 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 10 98191674 98202687 1 1 15 0 1 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 14.01 0 99.82 0 2 NA Whitelist KIRP-US 0.62 0.75 NA NA 0.59 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 2 0.07 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 14 NA NA 0 0 15 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.63 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 15 NA NA 0 0 15 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.59 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 17 28291655 28303478 1 1 15 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 14.01 0 100 0 2 NA Whitelist KIRP-US 0.62 0.59 NA NA 0.59 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 2 0.07 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 20 NA NA 0 0 15 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.52 NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 0 0 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::a7bf785f-0539-4899-ac21-47d1fc347ee8 X 147547268 147613593 1 1 15 1 0 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 14.01 100 0 0 1 NA Whitelist KIRP-US 0.62 0.77 NA NA 0.59 0 No KIRP-US a7bf785f-0539-4899-ac21-47d1fc347ee8 KIRP 0.34 1.9 Kidney-RCC NA 2 0.07 NA 2 KIRP-US DO20905 TCGA-AL-3473 a7bf785f-0539-4899-ac21-47d1fc347ee8 male alive C64.1 55 NA 763 NA Included Kidney-RCC KIRP US 0 25.1 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 1 49305176 171932133 1 6 87 2 0 0 1 3 0.3 0.11 7 0 0 7 4 6 8 4 6 68.57 72.91 23.89 0 4 2 Whitelist KIRP-US 0.62 0.28 0 0 0.59 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 9 0.05 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 2 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 3 61343832 173942902 1 6 87 3 1 1 1 0 0.57 1 8 0 0 8 3 7 9 3 7 68.57 99.47 0.38 0 3 2 Whitelist KIRP-US 0.68 1 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 12 0.07 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 4 40787872 40908444 1 1 87 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 68.57 0.06 99.92 0 1 2 Whitelist KIRP-US 0.62 0.11 NA NA 0.59 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 5 145649761 162244252 4 5 87 1 0 1 2 1 0.57 0 1 0 0 NA NA NA 10 3 6 68.57 54.11 45.73 0 2 NA Whitelist KIRP-US 0.68 0 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 9 0.05 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 6 6763614 130357048 2 5 87 2 0 1 1 1 0.57 0 14 0 0 14 4 5 19 5 5 68.57 99.62 0.21 0 3 4 Whitelist KIRP-US 0.62 0 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 9 0.05 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 7 76534974 77889475 1 3 87 1 0 1 0 1 0.57 1 5 0 0 5 4 5 8 4 4 68.57 97.36 0.09 0 2 3 Whitelist KIRP-US 0.87 1 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 5 0.03 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 8 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 9 NA NA 0 0 87 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist KIRP-US NA 0.93 NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 10 31709025 31779300 2 2 87 0 0 1 1 0 0.57 0.3 1 0 0 NA NA NA 5 3 3 68.57 62.51 37.31 0 1 NA Whitelist KIRP-US 0.68 0.54 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 4 0.02 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 11 100501323 100706671 2 2 87 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 12 5 12 68.57 99.21 0.36 0 3 NA Whitelist KIRP-US 0.68 0 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 4 0.02 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 12 83443823 83499257 1 1 87 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 68.57 99.88 0.04 0 2 3 Whitelist KIRP-US 0.62 0.42 NA NA 0.59 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 13 55558267 55691152 1 1 87 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 68.57 0.12 99.77 0 2 4 Whitelist KIRP-US 0.62 0.63 NA NA 0.59 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 2 0.01 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 14 22153770 28165622 2 2 87 0 0 1 1 0 0.57 0.35 1 0 0 NA NA NA NA NA NA 68.57 0.03 99.88 0 2 NA Whitelist KIRP-US 0.68 0.61 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 4 0.02 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 15 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 16 3831471 49682915 1 2 87 1 1 0 0 0 0.57 0.51 4 0.01 0.02 4 3 4 5 3 3 68.57 99.64 0.03 0 3 2 Whitelist KIRP-US 0.68 0.75 0.01 0.02 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 4 0.02 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 17 NA NA 0 0 87 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 18 36785394 62248215 1 5 87 2 0 1 0 2 0.3 0.03 6 0 0 6 4 4 7 4 4 68.57 37.77 62.2 0 1 2 Whitelist KIRP-US 0.62 0.11 0 0 0.59 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 8 0.05 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 19 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 20 14510954 14830356 2 2 87 0 0 1 1 0 0.57 0.44 1 0 0 NA NA NA 5 5 5 68.57 92.58 0.34 0 3 NA Whitelist KIRP-US 0.68 0.69 0 0 0.64 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 4 0.02 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 21 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 22 NA NA 0 0 87 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b06cdf61-61c9-4035-a55d-1ef21dc21069 X 95018260 142406287 1 7 87 5 0 0 0 2 0 0.04 2 0 0 NA NA NA 5 5 5 68.57 92.37 7.4 0 2 4 Whitelist KIRP-US 0.47 0.15 0 0 0.07 0 No KIRP-US b06cdf61-61c9-4035-a55d-1ef21dc21069 KIRP 0.64 2.91 Kidney-RCC NA 12 0.07 NA 3 KIRP-US DO49728 TCGA-AL-A5DJ b06cdf61-61c9-4035-a55d-1ef21dc21069 female alive C64.1 54 NA 26 NA Included Kidney-RCC KIRP US 0 0.86 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 1 176110077 176148072 1 1 64 0 1 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 89.99 100 0 0 4 NA Whitelist KIRP-US 0.62 0.73 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 2 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 3 174218446 174293115 1 1 64 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 89.99 96.85 0 0 4 NA Whitelist KIRP-US 0.62 0.33 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 4 10456463 182597310 1 2 64 2 0 0 0 0 0.11 0.8 4 0 0.04 4 4 4 5 5 5 89.99 99.99 0 0 3 4 Whitelist KIRP-US 0.54 0.95 0 0.04 0.48 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 4 0.03 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 5 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 6 1871455 129564819 1 3 64 1 0 1 0 1 0.57 0.79 4 0 0.01 4 0 4 7 3 5 89.99 92.25 7.61 0 3 2 Whitelist KIRP-US 0.87 0.95 0 0.01 0.64 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 5 0.04 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 7 69772625 69784379 1 1 64 1 0 0 0 0 0.39 0.16 1 0.16 NA NA NA NA NA NA NA 89.99 99.78 0 0 4 NA Whitelist KIRP-US 0.62 0.36 0.16 NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 8 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 9 22712423 22727507 1 1 64 1 0 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 89.99 50.16 49.7 0 4 NA Whitelist KIRP-US 0.62 0.91 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 10 131510337 131559909 1 1 64 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA 4 4 4 89.99 54.51 45.32 0 3 NA Whitelist KIRP-US 0.62 0.93 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 11 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 12 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 13 40227154 48043123 1 2 64 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 89.99 100 0 0 3 4 Whitelist KIRP-US 0.54 1 NA 0 0.48 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 4 0.03 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 14 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 15 NA NA 0 0 64 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.89 NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 16 57055316 64570400 2 2 64 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 89.99 99.91 0 0 6 NA Whitelist KIRP-US 0.68 0.04 0 0 0.64 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 4 0.03 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 17 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 1 NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 18 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 19 1021778 54719797 28 33 64 7 8 6 7 5 0.96 0 30 0 0 30 5 9 32 5 9 89.99 81.45 18.37 0 3 2 Whitelist KIRP-US 0.91 0 0 0 0.98 0 Low confidence KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC With other complex events 61 0.48 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 20 60467067 60480753 1 1 64 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 89.99 99.03 0 0 6 NA Whitelist KIRP-US 0.62 1 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 2 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 21 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d 22 NA NA 0 0 64 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.39 NA NA NA 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 0 0 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::b809c2f2-185c-496a-a1d4-589294443a1d X 57814115 57935069 1 2 64 0 0 0 1 1 0.39 0.77 2 NA NA NA NA NA NA NA NA 89.99 96.65 0 0 1 NA Whitelist KIRP-US 0.68 0.93 NA NA 0.59 0 No KIRP-US b809c2f2-185c-496a-a1d4-589294443a1d KIRP 0.78 3.63 Kidney-RCC NA 3 0.02 NA 4 KIRP-US DO44496 TCGA-B9-A44B b809c2f2-185c-496a-a1d4-589294443a1d male alive C64.1 70 NA 64 NA Included Kidney-RCC KIRP US 0 2.11 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 1 69552632 69746657 1 1 61 1 0 0 0 0 0.39 0.63 2 NA NA NA NA NA 5 5 5 43.94 0.75 99.25 0 1 2 Whitelist KIRP-US 0.62 0.84 NA NA 0.59 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 2 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 2 195067217 231202636 5 7 61 0 1 3 1 2 0.28 0.02 5 0 0 5 3 5 8 3 4 43.94 96.83 0.49 1 3 1 Whitelist KIRP-US 0.62 0.07 0 0 0.59 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 12 0.1 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 3 137899390 165198947 1 14 61 2 1 1 0 10 0.57 0 3 0 0 NA NA NA 6 4 4 43.94 83.81 16.05 0 1 2 Whitelist KIRP-US 4 0.68 0 0 0 0.64 0 Linked to low confidence KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC With other complex events 18 0.15 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 4 76505435 82891389 17 27 61 5 5 3 4 10 0.89 0 6 0 0 6 6 6 6 6 6 43.94 58.78 40.98 0 1 2 Whitelist KIRP-US 0.68 0 0 0 0.92 0 Low confidence KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC Canonical without polyploidization 44 0.36 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 5 75660846 76590484 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 43.94 99.35 0.51 0 2 3 Whitelist KIRP-US 0.62 1 NA NA 0.59 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 2 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 6 41586203 165393303 1 2 61 2 0 0 0 0 0.11 0.59 3 NA 0 NA NA NA NA NA NA 43.94 0.21 99.64 0 2 1 Whitelist KIRP-US 0.54 0.81 NA 0 0.48 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 4 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 7 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 8 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 9 21371334 31755902 1 3 61 2 0 0 0 1 0.11 0.52 5 NA 0 5 4 5 6 4 4 43.94 22.42 76.88 0 1 2 Whitelist KIRP-US 0.62 0.76 NA 0 0.48 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 5 0.04 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 10 64787180 74822845 1 2 61 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 43.94 0.13 99.69 1 1 2 Whitelist KIRP-US 0.54 1 NA 0 0.48 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 4 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 11 113713856 114615528 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 43.94 40.02 59.58 0 2 3 Whitelist KIRP-US 0.62 1 NA NA 0.59 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 2 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 12 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 13 NA NA 0 0 61 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.9 NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 14 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 16 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 17 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 18 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 19 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 20 52706154 52826453 1 1 61 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 43.94 0 99.03 0 2 NA Whitelist KIRP-US 0.62 0.63 NA NA 0.59 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 2 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::d80f601b-1064-4ff0-9c51-7f6afb22d1f5 X NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US d80f601b-1064-4ff0-9c51-7f6afb22d1f5 KIRP 0.84 1.98 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 KIRP-US DO44517 TCGA-A4-A57E d80f601b-1064-4ff0-9c51-7f6afb22d1f5 male alive C64.1 59 NA 0 NA Included Kidney-RCC KIRP US 0 0 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 3 115326547 192492975 4 4 4 0 1 1 2 0 0.57 0 5 0 0 5 4 5 7 4 4 29.05 50.95 45.97 0 3 4 Whitelist KIRP-US 0.68 0 0 0 0.64 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 8 1 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::df135722-b98d-4dec-906d-77da13df39b9 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US df135722-b98d-4dec-906d-77da13df39b9 KIRP 0.63 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO20915 TCGA-B9-4114 df135722-b98d-4dec-906d-77da13df39b9 male alive C64.1 49 NA 21 NA Included Kidney-RCC KIRP US 0 0.69 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 6 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.19 NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 19 NA NA 0 0 1 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.08 NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::e4245fff-1281-40e5-87b4-4e42a18a3a63 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US e4245fff-1281-40e5-87b4-4e42a18a3a63 KIRP 0.65 2.16 Kidney-RCC NA 0 0 NA 3 KIRP-US DO44528 TCGA-HE-A5NL e4245fff-1281-40e5-87b4-4e42a18a3a63 male alive C64.1 51 NA 167 NA Included Kidney-RCC KIRP US 0 5.49 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 1 168515122 168544051 1 1 3 0 0 0 1 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 16.87 0 100 0 2 NA Whitelist KIRP-US 0.62 0.45 NA NA 0.59 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 6 NA NA 0 0 3 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.38 NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 15 24672334 24722714 1 1 3 0 1 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 16.87 0 100 0 2 NA Whitelist KIRP-US 0.62 0.23 NA NA 0.59 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f0f7e57f-1e9d-4f24-a685-a0811aacbbed X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f0f7e57f-1e9d-4f24-a685-a0811aacbbed KIRP 0.86 2.12 Kidney-RCC NA 0 0 NA 3 KIRP-US DO48482 TCGA-MH-A55Z f0f7e57f-1e9d-4f24-a685-a0811aacbbed male alive C64.1 65 NA 391 NA Included Kidney-RCC KIRP US 0 12.86 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.36 NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.32 NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 12 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA 0.33 NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 19 22503446 22924515 1 1 3 0 0 1 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 18.96 0 99.68 0 2 NA Whitelist KIRP-US 0.62 0.18 NA NA 0.59 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 2 0.33 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 KIRP-US::f1ec5a7b-0973-4c38-9908-862196df9541 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist KIRP-US NA NA NA NA NA 0 No KIRP-US f1ec5a7b-0973-4c38-9908-862196df9541 KIRP 0.84 2.08 Kidney-RCC NA 0 0 NA 3 KIRP-US DO49738 TCGA-B1-A47N f1ec5a7b-0973-4c38-9908-862196df9541 male alive C64.1 62 NA 278 NA Included Kidney-RCC KIRP US 0 9.14 LAML-KR::SNU_WGS_01 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.47 NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 8 NA NA 0 0 3 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.04 NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 21 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0 NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_01 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_01 LAML 0.53 1.9 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49528 SNU_WGS_01 male alive c92.0 chemotherapy disease progression 54 334 334 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 10.99 LAML-KR::SNU_WGS_02 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 8 130562288 130754140 1 1 3 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 5.05 0.13 99.86 0 2 3 Whitelist LAML-KR 0.62 0 NA NA 0.59 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 2 0.33 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 21 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0 NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_02 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_02 LAML 1 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49529 SNU_WGS_02 male alive c92.0 chemotherapy complete response 54 338 338 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.12 LAML-KR::SNU_WGS_04 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 5 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.31 NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 9 33613911 33796805 1 1 2 0 0 1 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 4.95 0 99.96 0 2 NA Whitelist LAML-KR 0.62 0.22 NA NA 0.59 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 2 0.5 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_04 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_04 LAML 0.98 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49531 SNU_WGS_04 male deceased c92.0 no treatment 49 76 76 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 2.5 LAML-KR::SNU_WGS_05 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.37 NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 8 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.26 NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 21 NA NA 0 0 2 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.09 NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_05 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_05 LAML 0.56 1.95 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49532 SNU_WGS_05 female alive c92.0 chemotherapy disease progression 39 364 364 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 11.97 LAML-KR::SNU_WGS_06 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.48 NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 11 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.44 NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 12 123186654 123200477 1 1 5 0 1 0 0 0 0.39 0.21 1 NA NA NA NA NA 5 3 5 5.02 0.09 99.46 0 2 NA Whitelist LAML-KR 0.62 0.44 NA NA 0.59 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 2 0.2 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 16 15815221 67123639 1 2 5 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 5.02 0 99.64 0 2 NA Whitelist LAML-KR 0.68 0.03 NA 0 0.64 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 4 0.4 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 19 54723812 54743623 1 1 5 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 5.02 0.11 99.72 0 2 NA Whitelist LAML-KR 0.62 0.26 NA NA 0.59 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 2 0.2 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_06 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_06 LAML 0.99 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49533 SNU_WGS_06 male alive c92.0 39 410 410 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 13.49 LAML-KR::SNU_WGS_09 1 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.01 NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 4 93608943 94383426 1 2 8 0 0 1 0 1 0.39 0.1 2 NA NA NA NA NA NA NA NA 8.11 0.41 99.57 0 1 2 Whitelist LAML-KR 0.68 0.26 NA NA 0.59 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 3 0.19 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 7 NA NA 0 0 8 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.2 NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 8 93076533 125481821 1 3 8 0 1 0 0 2 0.39 0 2 NA 0 NA NA NA NA NA NA 8.11 14.27 85.73 0 2 3 Whitelist LAML-KR 0.87 0 NA 0 0.59 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 4 0.25 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 21 NA NA 0 0 8 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.26 NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_09 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_09 LAML 0.91 1.93 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49536 SNU_WGS_09 male alive c92.0 chemotherapy complete response 46 378 378 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.43 LAML-KR::SNU_WGS_10 1 NA NA 0 0 3 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.45 NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.47 NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 8 NA NA 0 0 3 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.04 NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 21 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0 NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_10 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_10 LAML 0.9 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO49537 SNU_WGS_10 female alive c92.0 chemotherapy complete response 50 388 388 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 12.76 LAML-KR::SNU_WGS_12 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 11 7 7 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 8 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA 0.34 NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 14 106054417 106175045 1 1 3 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA 5 3 3 0.25 1.58 94.71 0 2 NA Whitelist LAML-KR 0.62 0.25 NA NA 0.59 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 2 0.33 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 16 15814986 67131899 1 1 3 0 0 1 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 0.25 0 99.6 0 2 NA Whitelist LAML-KR 0.62 0.22 NA NA 0.59 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 2 0.33 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LAML-KR::SNU_WGS_12 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LAML-KR NA NA NA NA NA 0 No LAML-KR SNU_WGS_12 LAML 0.82 2 Myeloid-AML NA 0 0 NA 2 LAML-KR DO221548 SNU_WGS_12 female alive c92.0 chemotherapy complete response 35 657 657 Smoking history not documented NA Don't know/Not sure Not Documented Included Myeloid-AML LAML KR 1 21.61 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 3 12174316 140636275 2 4 5 0 1 0 1 2 0.57 0 1 0 0 NA NA NA NA NA NA 9.93 0 99.95 0 2 NA Whitelist LGG-US 0.68 0 0 0 0.64 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 6 0.6 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 11 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.44 NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 15 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.04 NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::010aac75-3bfe-4bf2-b866-af0f2d92f125 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 010aac75-3bfe-4bf2-b866-af0f2d92f125 LGG 0.78 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22496 TCGA-DB-5278 010aac75-3bfe-4bf2-b866-af0f2d92f125 male alive C71.0 17 NA 1526 NA Included CNS-Oligo LGG US 0 50.2 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 2 NA NA 0 0 3 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.47 NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 7 92088958 136715155 1 1 3 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 8.76 28.04 71.73 0 2 3 Whitelist LGG-US 0.62 0.04 NA NA 0.59 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 2 0.33 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::01c4ca12-ac08-41dd-9e4f-bfb0971688a2 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 LGG 0.81 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22117 TCGA-DU-7009 01c4ca12-ac08-41dd-9e4f-bfb0971688a2 female alive C71.0 32 NA 4206 NA Included CNS-Oligo LGG US 0 138.36 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 7 131270874 131413259 1 1 4 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 7.05 0.09 99.68 0 1 2 Whitelist LGG-US 0.62 0.42 NA NA 0.59 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 2 0.25 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 11 81476213 82667030 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 7.05 0.88 98.54 0 1 2 Whitelist LGG-US 0.62 0.39 NA NA 0.59 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 2 0.25 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 12 75389519 75500840 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 7.05 0.08 99.83 0 1 2 Whitelist LGG-US 0.62 0.39 NA NA 0.59 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 2 0.25 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::1cc53ade-73c0-492b-a7dc-328269fd0e66 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.41 NA NA NA 0 No LGG-US 1cc53ade-73c0-492b-a7dc-328269fd0e66 LGG 0.92 1.93 CNS-Oligo NA 0 0 NA 2 LGG-US DO22524 TCGA-DU-5874 1cc53ade-73c0-492b-a7dc-328269fd0e66 female alive C71.9 62 NA 461 NA Included CNS-Oligo LGG US 0 15.16 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 1 NA NA 0 0 26 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.9 NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 2 24164181 126535370 1 3 26 0 3 0 0 0 0.03 0.48 2 0 0 NA NA NA NA NA NA 5.8 0.35 99.54 0 2 3 Whitelist LGG-US 0.41 0.72 0 0 0.33 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 6 0.12 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 3 101110333 101371447 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.8 0.13 99.82 0 2 3 Whitelist LGG-US 0.62 1 NA NA 0.59 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 2 0.04 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 4 176380132 176773912 1 2 26 1 1 0 0 0 0.57 0.69 1 NA 0 NA NA NA NA NA NA 5.8 0 99.79 0 2 NA Whitelist LGG-US 0.68 0.89 NA 0 0.64 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 4 0.08 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 6 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 8 NA NA 0 0 26 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LGG-US NA 0.34 NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 11 6035634 128568971 2 2 26 0 0 1 1 0 0.57 0.12 3 0 0 NA NA NA NA NA NA 5.8 7.05 92.52 0 2 3 Whitelist LGG-US 0.68 0.3 0 0 0.64 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 4 0.08 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 12 57490159 58588805 2 2 26 0 2 0 0 0 0.11 0.35 3 NA 0 NA NA NA 4 0 3 5.8 0.58 99.34 0 2 3 Whitelist LGG-US 0.54 0.6 NA 0 0.48 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 4 0.08 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 13 NA NA 0 0 26 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.46 NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 14 67901953 101256570 1 3 26 0 2 0 0 1 0.11 0.01 2 0 0 NA NA NA NA NA NA 5.8 0.1 98.98 0 2 3 Whitelist LGG-US 0.62 0.04 0 0 0.48 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 5 0.1 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 15 68826036 68867139 1 1 26 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 5.8 0.04 99.86 0 1 2 Whitelist LGG-US 0.62 0.76 NA NA 0.59 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 2 0.04 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 17 68888655 71671510 1 1 26 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 5.8 3.43 96.57 0 2 3 Whitelist LGG-US 0.62 0.75 NA NA 0.59 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 2 0.04 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 19 565567 12426045 1 2 26 0 2 0 0 0 0.11 0.09 4 NA 0.04 4 4 4 6 5 5 5.8 52.58 40.15 0 2 3 Whitelist LGG-US 0.54 0.25 NA 0.04 0.48 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 4 0.08 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 0 0 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 22 35737576 36159055 1 1 26 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 5.8 0.82 99.18 0 2 3 Whitelist LGG-US 0.62 0.51 NA NA 0.59 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 2 0.04 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::400b2fa3-baf7-4baa-99b4-88b9f25b5049 X 24948947 25568035 2 2 26 0 0 1 1 0 0.57 0.14 1 0 0 NA NA NA NA NA NA 5.8 0 99.77 0 2 NA Whitelist LGG-US 0.68 0.34 0 0 0.64 0 No LGG-US 400b2fa3-baf7-4baa-99b4-88b9f25b5049 LGG 0.89 1.96 CNS-Oligo NA 4 0.08 NA 2 LGG-US DO22195 TCGA-E1-5318 400b2fa3-baf7-4baa-99b4-88b9f25b5049 female deceased C71.9 42 2379 NA NA Included CNS-Oligo LGG US 1 78.26 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 5 NA NA 0 0 4 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.46 NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 6 NA NA 0 0 4 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.45 NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 7 135650005 135879173 1 1 4 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 89.11 99.77 0 0 4 6 Whitelist LGG-US 0.62 0.42 NA NA 0.59 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 2 0.25 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.41 NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 17 27721311 27829026 1 1 4 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 89.11 99.98 0 0 4 6 Whitelist LGG-US 0.62 0.27 NA NA 0.59 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 2 0.25 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::42251e02-b687-4bf1-a1b6-e3dd978542e4 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 42251e02-b687-4bf1-a1b6-e3dd978542e4 LGG 0.55 3.67 CNS-Oligo NA 0 0 NA 4 LGG-US DO22324 TCGA-HW-7487 42251e02-b687-4bf1-a1b6-e3dd978542e4 male alive C71.0 39 NA 409 NA Included CNS-Oligo LGG US 0 13.45 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 1 78370948 78562968 1 1 3 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 4 3 3 4.86 48.69 48.28 0 0 1 Whitelist LGG-US 0.62 0.45 NA NA 0.59 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 2 0.33 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 3 65524828 65650130 1 1 3 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 4.86 0 99.86 0 2 NA Whitelist LGG-US 0.62 0.42 NA NA 0.59 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 2 0.33 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.39 NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::5017c115-39b8-4c5c-8be6-2cb298d7c641 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 5017c115-39b8-4c5c-8be6-2cb298d7c641 LGG 0.77 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22417 TCGA-HT-7695 5017c115-39b8-4c5c-8be6-2cb298d7c641 female alive C71.0 29 NA 442 NA Included CNS-Oligo LGG US 0 14.54 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 2 156643175 157472206 1 1 8 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 9.79 0 99.9 0 2 NA Whitelist LGG-US 0.62 0.75 NA NA 0.59 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 2 0.12 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 5 156967519 157732984 1 1 8 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 9.79 0 99.86 0 2 NA Whitelist LGG-US 0.62 0.65 NA NA 0.59 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 2 0.12 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 7 NA NA 0 0 8 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.61 NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 9 NA NA 0 0 8 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.52 NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 10 NA NA 0 0 8 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.56 NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 16 3713274 5549441 1 1 8 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 9.79 0 99.89 0 2 NA Whitelist LGG-US 0.62 0.42 NA NA 0.59 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 2 0.12 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 19 36031992 36293729 1 3 8 0 1 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 9.79 51.63 41.09 0 1 NA Whitelist LGG-US 0.87 0 0 0 0.84 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 6 0.38 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::55a67639-ed05-4143-af96-a377bc5489ee X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 55a67639-ed05-4143-af96-a377bc5489ee LGG 0.56 1.88 CNS-Oligo NA 0 0 NA 2 LGG-US DO22736 TCGA-HW-7486 55a67639-ed05-4143-af96-a377bc5489ee male alive C71.0 37 NA 609 NA Included CNS-Oligo LGG US 0 20.03 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 2 226753008 227327892 2 2 6 1 1 0 0 0 0.57 0.08 1 NA 0 NA NA NA NA NA NA 22.81 0 99.9 0 2 NA Whitelist LGG-US 0.68 0.24 NA 0 0.64 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 4 0.33 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 8 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.12 NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 9 21929937 21999412 1 1 6 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 22.81 18.85 80.45 0 0 1 Whitelist LGG-US 0.62 0.08 NA NA 0.59 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 2 0.17 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 17 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.35 NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::648252da-dd86-48d1-ae75-4257e3142b0b X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 648252da-dd86-48d1-ae75-4257e3142b0b LGG 0.66 1.78 CNS-Oligo NA 0 0 NA 2 LGG-US DO22293 TCGA-FG-5964 648252da-dd86-48d1-ae75-4257e3142b0b male alive C71.0 62 NA 378 NA Included CNS-Oligo LGG US 0 12.43 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 1 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 2 214706062 225494723 16 16 45 4 4 5 3 0 0.92 0 11 0 0 11 6 6 13 7 7 11.26 8.89 91 1 1 2 Whitelist LGG-US 0.95 0 0 0 0.94 0 Low confidence LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo With other complex events 32 0.36 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 3 142716120 143292887 2 2 45 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 5 5 5 11.26 24.67 72.16 0 2 1 Whitelist LGG-US 0.68 1 0 0 0.64 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 4 0.04 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 4 174839672 175196611 1 2 45 0 1 0 0 1 0.39 1 1 NA NA NA NA NA 4 3 3 11.26 1.43 98.48 0 3 NA Whitelist LGG-US 0.68 1 NA NA 0.59 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 3 0.03 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 5 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 6 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 7 143861983 145900965 1 1 45 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 6 3 3 11.26 55.15 42.01 0 6 7 Whitelist LGG-US 0.62 0.91 NA NA 0.59 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 2 0.02 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 8 99177008 117952973 1 1 45 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 11.26 0 99.89 0 2 NA Whitelist LGG-US 0.62 0.9 NA NA 0.59 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 2 0.02 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 9 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 10 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 11 NA NA 0 0 45 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.9 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 12 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 13 74418583 75018605 1 1 45 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.26 0.52 85.33 0 2 5 Whitelist LGG-US 0.62 1 NA NA 0.59 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 2 0.02 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 14 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 16 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 17 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 18 11795523 13645922 2 4 45 1 0 1 2 0 0.57 0 8 0 0 8 8 8 9 9 9 11.26 3.29 92.06 0 1 2 Whitelist LGG-US 0.68 0 0 0 0.64 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 8 0.09 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 19 NA NA 0 0 45 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.81 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f 22 NA NA 0 0 45 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.07 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::6a0bcf0c-fa4c-4119-99d2-f722b781d20f X NA NA 0 0 45 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.9 NA NA NA 0 No LGG-US 6a0bcf0c-fa4c-4119-99d2-f722b781d20f LGG 0.21 1.99 CNS-Oligo NA 0 0 stopgain,17_7574012_A_C,CN:2 2 LGG-US DO22285 TCGA-FG-8182 6a0bcf0c-fa4c-4119-99d2-f722b781d20f male alive C71.0 35 NA 101 NA Included CNS-Oligo LGG US 0 3.32 LGG-US::70939245-41e0-4845-a473-5fef719b9828 1 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 2 233007189 234954124 1 3 62 1 0 0 0 2 0.39 0.82 2 NA 0 NA NA NA 5 4 4 18.64 13.28 86.63 0 1 2 Whitelist LGG-US 0.87 0.96 NA 0 0.59 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 4 0.03 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 3 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 4 483333 4943380 14 14 62 4 2 4 4 0 0.84 0 14 0 0 14 6 8 16 7 9 18.64 1.41 98.48 0 2 3 Whitelist LGG-US 0.9 0 0 0 0.88 1 Low confidence LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo With other complex events 28 0.23 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 5 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 6 NA NA 0 0 62 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.4 NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 7 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 8 NA NA 0 0 62 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.63 NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 9 NA NA 0 0 62 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LGG-US NA 0.91 NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 10 115885946 117442403 2 3 62 1 1 0 0 1 0.57 0.02 2 0 0 NA NA NA 6 6 6 18.64 13.35 86.48 4 1 2 Whitelist LGG-US 0.62 0.09 0 0 0.64 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 5 0.04 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 11 67579787 119004447 10 18 62 2 1 3 4 8 0.57 0 12 0 0 12 11 12 14 13 13 18.64 22.79 76.65 0 2 1 Whitelist LGG-US 0.68 0 0 0 0.64 1 High confidence LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo Canonical without polyploidization 28 0.23 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 12 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 13 21658354 114987188 9 15 62 3 1 2 3 6 0.75 0 3 0 0 NA NA NA NA NA NA 18.64 1.98 97.87 0 2 1 Whitelist LGG-US 11 0.68 0 0 0 0.83 1 Linked to high confidence LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo With other complex events 24 0.19 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 14 NA NA 0 0 62 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.9 NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 15 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 16 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 17 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 18 65438254 68382077 1 1 62 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.64 99.96 0 3 1 NA Whitelist LGG-US 0.62 1 NA NA 0.59 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 19 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 20 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::70939245-41e0-4845-a473-5fef719b9828 X 136405267 136573881 1 1 62 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 18.64 34.52 65.25 0 2 NA Whitelist LGG-US 0.62 0.63 NA NA 0.59 1 No LGG-US 70939245-41e0-4845-a473-5fef719b9828 LGG 0.8 2.06 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7579362_C_A,CN:2 2 LGG-US DO22295 TCGA-DU-6407 70939245-41e0-4845-a473-5fef719b9828 female deceased C71.0 35 2875 NA NA Included CNS-Oligo LGG US 1 94.57 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 1 155784109 249210309 1 2 7 0 2 0 0 0 0.11 0.1 2 NA 0 NA NA NA 4 3 3 5.73 49.08 47.86 0 2 3 Whitelist LGG-US 0.54 0.26 NA 0 0.48 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 4 0.29 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 11 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.53 NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 14 57595703 80309453 3 3 7 2 1 0 0 0 0.3 0 3 0 0 NA NA NA NA NA NA 5.73 21.14 77.94 0 2 1 Whitelist LGG-US 0.62 0 0 0 0.59 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 6 0.43 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84569c1a-6baa-4380-ae3c-707df1be4618 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84569c1a-6baa-4380-ae3c-707df1be4618 LGG 0.66 1.94 CNS-Oligo NA 0 0 NA 2 LGG-US DO22536 TCGA-E1-5319 84569c1a-6baa-4380-ae3c-707df1be4618 female deceased C71.9 48 2907 NA NA Included CNS-Oligo LGG US 1 95.62 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 1 NA NA 0 0 9 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LGG-US NA 0 0 NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 11 127207572 131748250 1 2 9 0 0 0 1 1 0.39 0 2 0 NA NA NA NA 4 3 4 15.87 9.75 89.82 0 2 3 Whitelist LGG-US 0.68 0 0 NA 0.59 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 3 0.17 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 13 104427823 111627796 1 1 9 0 1 0 0 0 0.39 0 2 0 0 NA NA NA 4 4 4 15.87 90.9 9.1 0 1 2 Whitelist LGG-US 0.62 0.02 0 0 0.59 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 2 0.11 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::84ae73e4-3b39-4444-9bfb-3fc6057eab32 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 84ae73e4-3b39-4444-9bfb-3fc6057eab32 LGG 0.87 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7578524_C_G,CN:2 2 LGG-US DO22382 TCGA-DU-7301 84ae73e4-3b39-4444-9bfb-3fc6057eab32 male deceased C71.0 53 788 NA NA Included CNS-Oligo LGG US 1 25.92 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 6 109163914 119907792 1 1 8 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 3 5 15.7 30.34 69.48 0 1 2 Whitelist LGG-US 0.62 0.05 NA NA 0.59 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 2 0.12 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 7 NA NA 0 0 8 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.2 NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 10 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.02 NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 17 7444595 9503823 1 1 8 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 15.7 2.54 97.46 0 0 2 Whitelist LGG-US 0.62 0.42 NA NA 0.59 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 2 0.12 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::97cb8701-7d63-4142-b404-006fbb3ecb0b X 6116574 20205543 1 2 8 0 0 1 0 1 0.39 0.01 3 NA NA NA NA NA 6 3 3 15.7 34.74 65.04 0 0 1 Whitelist LGG-US 0.68 0.03 NA NA 0.59 0 No LGG-US 97cb8701-7d63-4142-b404-006fbb3ecb0b LGG 0.35 1.89 CNS-Oligo NA 3 0.19 nonsynonymous_SNV,17_7574018_A_G,CN:0 1 LGG-US DO22490 TCGA-DU-6401 97cb8701-7d63-4142-b404-006fbb3ecb0b female deceased C71.0 31 2660 NA NA Included CNS-Oligo LGG US 1 87.5 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.61 NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 9 139399094 139417146 2 2 6 0 2 0 0 0 0.11 0.02 2 NA 0 NA NA NA NA NA NA 10.11 0.61 98.68 0 2 3 Whitelist LGG-US 0.54 0.08 NA 0 0.48 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 4 0.33 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 14 NA NA 0 0 6 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.39 NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 19 52789339 52890318 2 2 6 1 1 0 0 0 0.57 0.01 3 NA 0 NA NA NA 4 3 3 10.11 51.63 41.09 0 1 0 Whitelist LGG-US 0.68 0.03 NA 0 0.64 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 4 0.33 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 20 NA NA 0 0 6 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.31 NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5d3f3fb-6541-419d-b47e-720d438f1bff X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US a5d3f3fb-6541-419d-b47e-720d438f1bff LGG 0.93 1.95 CNS-Oligo NA 0 0 NA 2 LGG-US DO22548 TCGA-CS-6668 a5d3f3fb-6541-419d-b47e-720d438f1bff female alive C71.9 57 NA 244 NA Included CNS-Oligo LGG US 0 8.03 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 1 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 2 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 3 11012006 132520457 1 6 48 2 1 1 0 2 0.57 0.02 4 0 0 4 3 4 5 3 3 19.58 0.39 99.47 0 2 1 Whitelist LGG-US 12 0.68 0.07 0 0 0.64 1 Linked to high confidence LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo Canonical without polyploidization 10 0.1 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 4 54822589 55447948 1 1 48 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA 4 3 3 19.58 22.14 77.6 0 2 NA Whitelist LGG-US 0.62 0.63 NA NA 0.59 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 5 26786324 33679402 1 1 48 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 4 4 19.58 74.96 24.92 0 1 2 Whitelist LGG-US 0.62 0.93 NA NA 0.59 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 6 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 7 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 8 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 9 18824910 32544234 1 2 48 1 0 0 1 0 0.57 0.04 3 0 0 NA NA NA 5 3 3 19.58 10.08 89.38 2 2 1 Whitelist LGG-US 0.68 0.14 0 0 0.64 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 4 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 10 68952807 96400931 4 4 48 1 0 2 1 0 0.57 0.02 8 0 0 8 8 8 9 8 8 19.58 60.84 38.98 2 1 2 Whitelist LGG-US 0.68 0.09 0 0 0.64 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 8 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 11 47722232 131635454 1 6 48 3 1 1 0 1 0.28 0.02 8 0 0 8 4 8 9 4 4 19.58 56.04 43.84 0 2 1 Whitelist LGG-US 0.62 0.09 0 0 0.59 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 11 0.11 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 12 40577459 111918430 13 16 48 2 4 4 3 3 0.84 0 29 0 0 29 11 14 31 11 13 19.58 40.39 55.87 0 2 3 Whitelist LGG-US 0.68 0 0 0 0.88 1 High confidence LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo With other complex events 29 0.3 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 13 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 15 89575776 89963395 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.58 0.38 99.62 0 2 3 Whitelist LGG-US 0.62 1 NA NA 0.59 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 17 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 18 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 19 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::a5f851c5-6130-4ea1-9f86-be59331a92f7 X 46683372 47408723 1 1 48 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 19.58 99.53 0.47 0 1 2 Whitelist LGG-US 0.62 0.76 NA NA 0.59 1 No LGG-US a5f851c5-6130-4ea1-9f86-be59331a92f7 LGG 0.93 1.83 CNS-Oligo NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 1 LGG-US DO22720 TCGA-IK-7675 a5f851c5-6130-4ea1-9f86-be59331a92f7 male deceased C71.0 43 578 NA NA Included CNS-Oligo LGG US 1 19.01 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 1 186471142 228569911 11 13 22 5 3 2 1 2 0.36 0 22 0 0 22 4 4 23 4 4 22.3 16.36 83.64 0 1 2 Whitelist LGG-US 0.62 0 0 0 0.59 0 Low confidence LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo With other complex events 24 0.55 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 3 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 1 NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 5 78286069 83180410 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.3 2.71 97.16 0 2 3 Whitelist LGG-US 0.62 1 NA NA 0.59 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 2 0.05 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 8 137309761 137353331 1 1 22 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.3 0.03 99.86 0 1 2 Whitelist LGG-US 0.62 1 NA NA 0.59 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 2 0.05 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 9 21823965 112636856 1 3 22 1 1 0 0 1 0.57 0.01 5 0 0 5 3 5 6 3 3 22.3 29.47 69.83 0 2 0 Whitelist LGG-US 0.87 0.05 0 0 0.64 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 5 0.11 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 13 76977100 77036317 1 1 22 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 22.3 0.05 99.81 0 1 2 Whitelist LGG-US 0.62 0.77 NA NA 0.59 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 2 0.05 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 19 NA NA 0 0 22 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.61 NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::f86fa219-34e9-4812-8edf-2b66d7219779 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US f86fa219-34e9-4812-8edf-2b66d7219779 LGG 0.8 2.01 CNS-Oligo NA 0 0 NA 2 LGG-US DO22356 TCGA-CS-5395 f86fa219-34e9-4812-8edf-2b66d7219779 male deceased C71.9 43 639 NA NA Included CNS-Oligo LGG US 1 21.02 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 4 52790148 59636707 1 4 8 0 1 0 1 2 0.57 0 4 0 0 4 3 4 6 4 4 16.25 70.69 26.7 0 2 1 Whitelist LGG-US 0.68 0 0 0 0.64 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 6 0.38 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 11 82302926 82480744 1 2 8 2 0 0 0 0 0.11 0.05 3 NA 0 NA NA NA NA NA NA 16.25 0.13 99.44 0 2 1 Whitelist LGG-US 0.54 0.16 NA 0 0.48 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 4 0.25 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 14 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA 0.01 NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LGG-US::fc3b7596-f515-446f-81db-fed0154ca2c5 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LGG-US NA NA NA NA NA 0 No LGG-US fc3b7596-f515-446f-81db-fed0154ca2c5 LGG 0.87 1.83 CNS-Oligo NA 0 0 NA 2 LGG-US DO22145 TCGA-EZ-7264 fc3b7596-f515-446f-81db-fed0154ca2c5 female alive C71.0 47 NA 160 NA Included CNS-Oligo LGG US 0 5.26 LICA-FR::CHC197 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 2 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 3 114209346 116655787 1 2 15 2 0 0 0 0 0.11 0.28 2 NA 0 NA NA NA NA NA NA 44.38 99.8 0.06 0 2 3 Whitelist LICA-FR 0.54 0.53 NA 0 0.48 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 4 0.13 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 5 NA NA 0 0 15 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.48 NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 7 99782785 99794895 1 1 15 0 1 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 44.38 97.37 0 0 4 NA Whitelist LICA-FR 0.62 0.79 NA NA 0.59 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 2 0.07 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 13 32646067 66930749 5 5 15 1 1 2 1 0 0.9 0 2 0 0 NA NA NA NA NA NA 44.38 22.11 77.89 0 1 2 Whitelist LICA-FR 0.93 0 0 0 0.92 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 10 0.33 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 15 43851707 43927181 1 1 15 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 44.38 0 100 0 2 NA Whitelist LICA-FR 0.62 0.59 NA NA 0.59 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 2 0.07 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 16 NA NA 0 0 15 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.59 NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 20 NA NA 0 0 15 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.52 NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 0 0 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC197 X 79121370 85871369 1 1 15 0 0 1 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 44.38 100 0 0 1 NA Whitelist LICA-FR 0.62 0.77 NA NA 0.59 0 No LICA-FR CHC197 LICA 0.59 2.54 Liver-HCC NA 2 0.07 NA 2 LICA-FR DO44740 CHC197 male alive C22.0 73 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC205 1 239675118 240919366 1 2 28 0 0 1 1 0 0.57 0.28 3 0 0 NA NA NA 10 5 5 69.31 53.38 43.62 0 4 2 Whitelist LICA-FR 0.68 0.52 0 0 0.64 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 4 0.07 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 2 24313757 237370135 1 4 28 4 0 0 0 0 0.01 0.29 8 0.01 0 8 8 8 9 9 9 69.31 91.38 8.52 0 2 4 Whitelist LICA-FR 0.21 0.54 0.01 0 0.16 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 8 0.14 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 3 17220800 133497367 1 3 28 3 0 0 0 0 0.03 0.13 4 0 0 4 4 4 5 5 5 69.31 93.16 6.8 0 2 3 Whitelist LICA-FR 0.41 0.32 0 0 0.33 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 6 0.11 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 5 2777292 20961948 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 3 69.31 97.31 0 0 5 6 Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 6 67358631 67371299 1 1 28 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 69.31 53.06 46.79 0 4 NA Whitelist LICA-FR 0.62 0.88 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 7 27166998 27268635 1 1 28 0 1 0 0 0 0.39 0.19 2 0.14 NA NA NA NA NA NA NA 69.31 99.78 0 0 3 4 Whitelist LICA-FR 0.62 0.41 0.14 NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 8 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 9 21746834 22077711 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 69.31 0.56 99.33 0 2 NA Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 10 11458501 11578933 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 69.31 99.81 0 0 3 NA Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 12 122226904 122315586 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 69.31 0.07 99.85 0 2 3 Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 13 NA NA 0 0 28 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.84 NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 16 29357843 29426819 1 1 28 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA 5 0 0 69.31 2.6 97.29 0 2 NA Whitelist LICA-FR 0.62 0.13 NA NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 17 NA NA 0 0 28 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.77 NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 19 21482403 21508546 1 1 28 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA NA NA NA 69.31 99.78 0.04 0 2 4 Whitelist LICA-FR 0.62 0.07 0 NA 0.59 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 2 0.04 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC205 X NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC205 LICA 0.82 3.1 Liver-HCC NA 0 0 NA 2 LICA-FR DO44744 CHC205 male deceased C22.0 46 275 275 NA Included Liver-HCC LICA FR 1 9.05 LICA-FR::CHC320 1 NA NA 0 0 47 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.94 0 NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 2 7236103 7410173 1 1 47 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 5.86 0.07 99.83 0 1 2 Whitelist LICA-FR 0.62 0.4 NA NA 0.59 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 3 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 4 100121692 190316238 1 2 47 1 1 0 0 0 0.57 0.56 4 0 0 4 3 4 5 3 3 5.86 0.51 99.29 0 2 1 Whitelist LICA-FR 0.68 0.78 0 0 0.64 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 4 0.04 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 5 NA NA 0 0 47 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.62 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 6 7123259 7541861 1 1 47 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 5.86 0.24 99.61 0 2 3 Whitelist LICA-FR 0.62 0.76 NA NA 0.59 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 7 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 8 27285845 27397879 1 1 47 0 1 0 0 0 0.39 0.3 2 0 NA NA NA NA NA NA NA 5.86 0.08 99.92 0 2 3 Whitelist LICA-FR 0.62 0.55 0 NA 0.59 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 9 21956322 22032872 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.86 0.05 99.27 0 1 2 Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 10 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 11 NA NA 0 0 47 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.73 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 12 110950053 111104919 1 1 47 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 5.86 0.12 99.8 0 2 3 Whitelist LICA-FR 0.62 0.9 NA NA 0.59 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 13 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 14 NA NA 0 0 47 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.87 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 15 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 16 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 1 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 17 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 19 NA NA 0 0 47 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.2 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 20 48177772 48623137 3 10 47 0 3 0 0 7 0.03 0 3 0 0 NA NA NA NA NA NA 5.86 22.62 76.34 0 2 3 Whitelist LICA-FR 0.68 0 0 0 0.33 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 13 0.14 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 21 NA NA 0 0 47 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.69 NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 22 43547274 43788234 2 7 47 0 1 1 0 5 0.57 0 3 0 0 NA NA NA 7 3 3 5.86 0.96 99.04 0 3 4 Whitelist LICA-FR 0.96 0 0 0 0.64 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 9 0.1 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC320 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC320 LICA 0.8 1.93 Liver-HCC NA 0 0 NA 2 LICA-FR DO44806 CHC320 male deceased C22.0 65 44 44 NA Included Liver-HCC LICA FR 1 1.45 LICA-FR::CHC429 1 67667770 68696015 1 1 12 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA 6 6 6 8.9 42.58 57.41 0 2 3 Whitelist LICA-FR 0.62 0.19 NA NA 0.59 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 2 0.08 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 2 170224015 171221041 1 1 12 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.9 0.41 99.47 0 2 3 Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 2 0.08 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 4 8348341 40347770 1 2 12 1 1 0 0 0 0.57 0.19 4 NA 0 4 3 4 5 3 3 8.9 0.61 99.21 1 2 1 Whitelist LICA-FR 0.68 0.41 NA 0 0.64 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 4 0.17 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 5 NA NA 0 0 12 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.77 NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 6 43681203 55514099 1 2 12 1 1 0 0 0 0.57 0.16 4 NA 0 4 3 4 8 4 6 8.9 97.09 0.08 0 3 2 Whitelist LICA-FR 0.68 0.37 NA 0 0.64 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 4 0.17 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 7 111583344 111688122 1 1 12 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 8.9 0.66 99.1 0 1 2 Whitelist LICA-FR 0.62 0.33 NA NA 0.59 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 2 0.08 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 12 56053855 111069333 1 2 12 0 2 0 0 0 0.11 0.11 2 NA 0 NA NA NA NA NA NA 8.9 0.62 99.3 1 2 3 Whitelist LICA-FR 0.54 0.28 NA 0 0.48 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 4 0.17 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 20 33312611 34215097 1 1 12 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 8.9 1.43 97.59 0 2 3 Whitelist LICA-FR 0.62 0.46 NA NA 0.59 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 2 0.08 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC429 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC429 LICA 0.94 2.02 Liver-HCC NA 0 0 NA 2 LICA-FR DO44828 CHC429 female alive C22.0 65 1826 1826 NA Included Liver-HCC LICA FR 1 60.07 LICA-FR::CHC433 1 1673746 204666436 1 5 51 3 1 0 0 1 0.11 0.29 7 0 0 7 3 4 8 3 4 28.21 41.94 58.06 0 5 1 Whitelist LICA-FR 0.62 0.54 0 0 0.48 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 9 0.09 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 2 71613759 196134813 1 3 51 3 0 0 0 0 0.03 0.8 4 0 0 4 4 4 5 5 5 28.21 0.18 99.7 0 1 2 Whitelist LICA-FR 0.41 0.95 0 0 0.33 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 6 0.06 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 3 13112201 181180276 1 5 51 1 1 0 1 2 0.8 0.17 3 0 0 NA NA NA NA NA NA 28.21 0.01 99.85 0 2 3 Whitelist LICA-FR 0.62 0.38 0 0 0.84 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 8 0.08 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 4 118298906 133479119 1 2 51 2 0 0 0 0 0.11 0.58 1 NA 0 NA NA NA NA NA NA 28.21 0 99.98 0 2 NA Whitelist LICA-FR 0.54 0.81 NA 0 0.48 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 4 0.04 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 5 120589903 158580184 2 2 51 1 0 1 0 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 28.21 99.72 0.15 0 3 NA Whitelist LICA-FR 0.68 0.06 0 0 0.64 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 4 0.04 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 7 1976928 133657751 1 5 51 3 0 0 0 2 0.03 0.2 5 0 0 5 5 5 5 5 5 28.21 99.58 0.2 1 3 2 Whitelist LICA-FR 0.62 0.42 0 0 0.33 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 8 0.08 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 8 NA NA 0 0 51 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.76 NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 9 21926224 22044835 1 1 51 1 0 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 28.21 0 99.84 0 2 NA Whitelist LICA-FR 0.62 0.7 0 NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 10 NA NA 0 0 51 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA 0.75 NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 11 31550237 31735947 1 1 51 1 0 0 0 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 28.21 0 99.57 0 2 NA Whitelist LICA-FR 0.62 0.55 0 NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 12 19381450 102326451 1 2 51 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 28.21 0.11 99.81 0 1 2 Whitelist LICA-FR 0.54 1 NA 0 0.48 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 4 0.04 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 13 23931955 76884051 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 28.21 45.98 54.02 0 1 2 Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 15 42810486 71757377 1 3 51 3 0 0 0 0 0.03 0.05 6 0 0 6 6 6 7 7 7 28.21 99.49 0.41 0 2 3 Whitelist LICA-FR 0.41 0.17 0 0 0.33 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 6 0.06 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 16 50641898 50671357 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.21 0 99.89 0 2 NA Whitelist LICA-FR 0.62 1 NA NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 17 34843810 34918959 1 1 51 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA 4 4 4 28.21 27.42 68.13 0 1 2 Whitelist LICA-FR 0.62 0.65 NA NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 20 15421799 15544341 1 1 51 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 28.21 98.81 0.19 0 2 3 Whitelist LICA-FR 0.62 0.55 NA NA 0.59 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 2 0.02 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 21 22266346 22927635 1 2 51 1 1 0 0 0 0.57 0.13 3 NA 0 NA NA NA NA NA NA 28.21 0.03 77.32 0 2 1 Whitelist LICA-FR 0.68 0.32 NA 0 0.64 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 4 0.04 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LICA-FR::CHC433 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LICA-FR NA NA NA NA NA 0 No LICA-FR CHC433 LICA 0.92 2.24 Liver-HCC NA 0 0 NA 2 LICA-FR DO44832 CHC433 male deceased C22.0 70 469 469 NA Included Liver-HCC LICA FR 1 15.43 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 1 8058341 244930271 7 10 53 2 2 2 1 3 0.93 0 13 0 0 13 5 7 14 5 7 29.01 99.91 0.09 0 3 4 Whitelist LIHC-US 0.96 0.01 0 0 0.95 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 17 0.16 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 2 13490105 13501917 1 1 53 0 1 0 0 0 0.39 0.45 2 0.02 NA NA NA NA NA NA NA 29.01 99.9 0 0 3 4 Whitelist LIHC-US 0.62 0.7 0.02 NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 3 66415539 197323693 1 3 53 2 1 0 0 0 0.3 1 5 0 0 5 4 5 6 5 5 29.01 0.13 99.49 0 1 2 Whitelist LIHC-US 0.62 1 0 0 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 6 0.06 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 4 3938001 29542045 2 2 53 1 1 0 0 0 0.57 0.01 4 0 0 4 3 4 7 5 5 29.01 0.32 99.48 0 2 1 Whitelist LIHC-US 0.68 0.04 0 0 0.64 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 4 0.04 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 5 27230951 27751235 2 2 53 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA 7 3 5 29.01 98.94 0.94 0 3 NA Whitelist LIHC-US 0.68 0.34 0 0 0.64 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 4 0.04 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 6 36629992 36647314 1 1 53 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 29.01 0.01 99.82 0 2 3 Whitelist LIHC-US 0.62 0.93 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 7 141999302 142494246 1 1 53 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 29.01 0.08 99.69 0 2 NA Whitelist LIHC-US 0.62 0.62 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 8 88970249 89192838 1 2 53 1 0 1 0 0 0.57 0.35 1 0 0 NA NA NA NA NA NA 29.01 96.58 0 0 3 NA Whitelist LIHC-US 0.68 0.6 0 0 0.64 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 4 0.04 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 9 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 10 115170637 115216619 1 1 53 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 29.01 0.03 99.79 0 2 3 Whitelist LIHC-US 0.62 0.91 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 11 68698594 69588273 1 3 53 0 1 0 0 2 0.39 0.74 4 NA 0 4 0 3 7 3 3 29.01 1.38 94.85 0 1 2 Whitelist LIHC-US 12 0.87 0.91 NA 0 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 4 0.04 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 12 19464022 132109583 1 7 53 3 0 0 0 4 0.03 0.01 6 0 0 6 6 6 7 7 7 29.01 2.36 97.55 3 1 2 Whitelist LIHC-US 0.62 0.05 0 0 0.33 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 10 0.09 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 13 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 14 22476332 23500842 1 2 53 1 0 1 0 0 0.57 0.03 2 0 0 NA NA NA NA NA NA 29.01 0.46 98.63 0 1 2 Whitelist LIHC-US 0.68 0.1 0 0 0.64 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 4 0.04 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 15 58361716 58405496 1 1 53 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.01 0.04 99.96 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 16 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 17 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 18 27379325 27389778 1 1 53 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.01 0 99.96 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 19 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 20 48780145 49148953 1 1 53 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.01 21.66 77.37 0 3 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::06ac44e9-1226-4202-828b-6f224766d7ac X NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 06ac44e9-1226-4202-828b-6f224766d7ac LIHC 0.4 2.3 Liver-HCC NA 0 0 NA 2 LIHC-US DO22970 TCGA-G3-A25W 06ac44e9-1226-4202-828b-6f224766d7ac female alive C22.0 79 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 1 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 5 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 6 68637322 68726231 1 1 20 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 4.96 0.05 99.68 0 1 2 Whitelist LIHC-US 0.62 0.59 NA NA 0.59 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 8 34936744 127869966 7 8 20 0 3 2 2 1 0.44 0 1 0 0 NA NA NA NA NA NA 4.96 0 99.88 0 2 NA Whitelist LIHC-US 0.62 0 0 0 0.64 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 15 0.38 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 9 NA NA 0 0 20 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.78 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 10 NA NA 0 0 20 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.47 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 13 NA NA 0 0 20 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.75 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 15 97414353 97629609 1 1 20 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 4.96 0.21 84.38 0 1 2 Whitelist LIHC-US 0.62 0.68 NA NA 0.59 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 17 NA NA 0 0 20 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.67 NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::0ff6364a-e6f4-47ca-a7e7-14705bf0a8df X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df LIHC 0.24 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22998 TCGA-DD-A1ED 0ff6364a-e6f4-47ca-a7e7-14705bf0a8df male alive C22.0 68 NA 1629 NA Included Liver-HCC LIHC US 0 53.59 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 1 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 2 123532293 123570690 1 2 32 1 0 0 0 1 0.39 0.19 1 0 NA NA NA NA NA NA NA 42.83 0.16 99.75 0 2 NA Whitelist LIHC-US 0.68 0.41 0 NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 3 0.05 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 4 152877865 153013418 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.83 0.07 99.91 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 6 49380013 61973674 1 6 32 1 1 0 0 4 0.57 0.01 3 0 0 NA NA NA NA NA NA 42.83 95.06 2.11 0 1 2 Whitelist LIHC-US 0.93 0.05 0 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 8 0.12 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 7 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 8 43186969 90128236 1 2 32 0 1 0 1 0 0.57 0.68 5 NA 0 5 3 5 5 3 3 42.83 95.04 1.43 0 3 1 Whitelist LIHC-US 0.68 0.88 NA 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 4 0.06 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 9 18703773 83922377 2 6 32 0 0 1 1 4 0.57 0 5 0 0 5 4 5 7 4 4 42.83 56.58 43.28 0 1 2 Whitelist LIHC-US 0.62 0 0 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 8 0.12 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 11 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 12 123246761 123431445 1 1 32 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 42.83 24.8 71.46 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 14 42577059 42745084 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.83 0.16 99.84 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 15 40537863 74890975 1 2 32 1 1 0 0 0 0.57 0.22 4 NA 0 4 3 4 5 3 3 42.83 0.13 99.75 0 2 1 Whitelist LIHC-US 0.68 0.45 NA 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 4 0.06 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 17 5605224 16882142 1 1 32 0 0 1 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 42.83 13.89 86.1 0 1 2 Whitelist LIHC-US 0.62 0.44 NA NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 18 39006147 42159715 2 3 32 0 1 1 0 1 0.57 0 3 0 0 NA NA NA 11 11 11 42.83 9.04 90.9 0 2 1 Whitelist LIHC-US 0.87 0 0 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 5 0.08 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 0 0 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 22 37394984 37452660 1 1 32 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 42.83 0.11 99.89 0 2 3 Whitelist LIHC-US 0.62 0.57 NA NA 0.59 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::17833039-0d7e-47f0-90e6-8cabae94c124 X 41203680 141605025 1 4 32 1 1 0 0 2 0.57 0.08 2 0 0 NA NA NA NA NA NA 42.83 99.95 0.05 0 1 2 Whitelist LIHC-US 1 0.22 0 0 0.64 0 No LIHC-US 17833039-0d7e-47f0-90e6-8cabae94c124 LIHC 0.79 2.01 Liver-HCC NA 6 0.09 stopgain,17_7577022_A_G,CN:1 2 LIHC-US DO44994 TCGA-FV-A3R2 17833039-0d7e-47f0-90e6-8cabae94c124 male deceased C22.0 75 194 NA NA Included Liver-HCC LIHC US 1 6.38 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 1 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 2 169886000 169913073 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 69.49 99.89 0.01 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 3 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 5 40818944 40836326 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 69.49 99.86 0 0 4 5 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 6 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 7 132443805 132546600 1 1 21 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 5 3 3 69.49 0.16 99.62 0 1 2 Whitelist LIHC-US 0.62 0.27 0 NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 9 21966614 22110089 1 1 21 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 69.49 99.36 0 0 0 4 Whitelist LIHC-US 0.62 0.79 NA NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 10 NA NA 0 0 21 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIHC-US NA 0.49 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 13 NA NA 0 0 21 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.76 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 16 63246182 63476017 1 1 21 1 0 0 0 0 0.39 0.02 1 0.23 NA NA NA NA NA NA NA 69.49 0 99.89 0 2 NA Whitelist LIHC-US 0.62 0.07 0.23 NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 18 NA NA 0 0 21 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.68 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 19 NA NA 0 0 21 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.59 NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e 22 42990004 43008171 1 1 21 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 69.49 0.04 99.96 0 2 3 Whitelist LIHC-US 0.62 0.45 NA NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::18c08546-bed3-4ed9-b223-479afe633c8e X 20188202 20269191 1 1 21 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 7 7 7 69.49 99.72 0.05 0 2 3 Whitelist LIHC-US 0.62 0.08 0 NA 0.59 0 No LIHC-US 18c08546-bed3-4ed9-b223-479afe633c8e LIHC 0.8 3.18 Liver-HCC NA 2 0.05 NA 3 LIHC-US DO22932 TCGA-EP-A2KB 18c08546-bed3-4ed9-b223-479afe633c8e female alive C22.0 46 NA 60 NA Included Liver-HCC LIHC US 0 1.97 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 1 36162230 240780208 1 4 51 1 1 0 2 0 0.57 0.12 8 0 0 8 3 6 9 4 6 84.06 99.72 0.01 0 5 3 Whitelist LIHC-US 0.68 0.3 0 0 0.64 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 8 0.08 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 2 114068367 225491786 1 2 51 2 0 0 0 0 0.11 1 4 0 0 4 3 4 9 5 7 84.06 99.82 0.07 0 4 2 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 3 23860895 160439511 1 8 51 4 2 1 1 0 0.39 0 12 0 0 12 3 9 15 5 5 84.06 99.83 0.12 0 4 2 Whitelist LIHC-US 0.62 0.01 0 0 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 16 0.16 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 4 711161 99459512 1 2 51 0 2 0 0 0 0.11 1 4 0 0 4 3 4 5 3 5 84.06 99.77 0 0 4 5 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 5 57735387 58711467 2 2 51 0 2 0 0 0 0.11 0 4 0 0 4 3 4 16 5 6 84.06 99.6 0.28 0 5 3 Whitelist LIHC-US 0.54 0.02 0 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 6 122308098 163668092 1 2 51 1 1 0 0 0 0.57 0.55 4 0 0 4 3 4 5 3 3 84.06 99.54 0.2 0 4 2 Whitelist LIHC-US 0.68 0.77 0 0 0.64 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 7 36427245 47249815 1 2 51 0 2 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 84.06 99.77 0 0 4 6 Whitelist LIHC-US 0.54 1 NA 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 10 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 11 10241159 10328511 1 1 51 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 84.06 99.5 0.06 0 2 3 Whitelist LIHC-US 0.62 0.91 NA NA 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 2 0.02 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 12 9261892 100998426 1 5 51 1 3 0 0 1 0.11 0.09 9 0 0 9 3 5 9 3 5 84.06 99.83 0.09 0 4 2 Whitelist LIHC-US 0.62 0.25 0 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 9 0.09 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 13 84075842 99108626 1 2 51 2 0 0 0 0 0.11 0.7 4 NA 0 4 3 4 5 3 5 84.06 99.68 0.32 0 4 2 Whitelist LIHC-US 0.54 0.89 NA 0 0.48 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 4 0.04 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 14 86560339 86715791 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.06 0.14 99.86 0 0 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 2 0.02 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 15 79160401 79186850 1 1 51 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.06 99.88 0 0 4 6 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 2 0.02 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 16 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 17 38565932 38582662 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.06 99.98 0.02 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 2 0.02 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 19 1188922 47707970 1 3 51 0 3 0 0 0 0.03 0.08 8 0.42 0.14 8 3 4 9 3 3 84.06 99.06 0.77 0 4 5 Whitelist LIHC-US 0.41 0.23 0.43 0.14 0.33 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 6 0.06 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 22 33653862 33870784 1 1 51 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 84.06 100 0 0 1 3 Whitelist LIHC-US 0.62 0.7 NA NA 0.59 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 2 0.02 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1983fade-44f1-41e0-8983-f2ce8d649655 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1983fade-44f1-41e0-8983-f2ce8d649655 LIHC 0.29 3.7 Liver-HCC NA 0 0 NA 4 LIHC-US DO48552 TCGA-DD-A4NB 1983fade-44f1-41e0-8983-f2ce8d649655 male alive C22.0 25 NA 391 NA Included Liver-HCC LIHC US 0 12.86 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 1 9273332 226103050 4 32 524 2 2 1 3 24 0.8 0 46 0 0 46 30 40 50 30 33 15.8 29.29 70.7 0 3 2 Whitelist LIHC-US 14_17_19_20_9 0.85 0 0 0 0.84 0 Linked to high confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC Canonical without polyploidization 40 0.04 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 False positive; manually removed LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 2 63681155 64282040 2 2 524 1 1 0 0 0 0.57 0.48 4 0 0 4 3 4 27 11 11 15.8 0.98 98.91 0 2 1 Whitelist LIHC-US 0.68 0.72 0 0 0.64 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 4 0 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 3 177834594 180109400 6 6 524 1 1 2 2 0 0.88 0.02 1 0 0 NA NA NA 39 9 9 15.8 29.33 70.55 0 3 NA Whitelist LIHC-US 0.93 0.08 0 0 0.91 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 12 0.01 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 4 122039841 145149274 10 10 524 0 4 3 3 0 0.31 1 20 0 0 20 20 20 37 21 24 15.8 34.38 65.61 0 2 3 Whitelist LIHC-US 0.62 1 0 0 0.59 0 High confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC Canonical without polyploidization 20 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 5 72217348 109015640 2 3 524 0 0 1 1 1 0.57 0.12 3 0 0 NA NA NA 19 11 11 15.8 0.83 99.04 0 2 3 Whitelist LIHC-US 0.62 0.31 0 0 0.64 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 5 0 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 6 5868963 162834996 1 27 524 6 8 0 0 13 0 0.65 16 0 0 16 5 16 18 5 5 15.8 16.59 83.27 0 2 3 Whitelist LIHC-US 11_16_20 0.62 0.86 0 0 0.08 0 Linked to low confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC With other complex events 41 0.04 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 7 28246412 155112626 1 16 524 0 10 0 0 6 0 0.92 15 0 0 15 15 15 15 15 15 15.8 0.56 99.21 0 2 3 Whitelist LIHC-US 14 0.07 1 0 0 0 0 Linked to high confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC Canonical without polyploidization 26 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 8 16237578 134333666 1 13 524 2 3 0 0 8 0.14 0.14 10 0 0 10 6 10 14 10 10 15.8 27.63 72.36 0 2 1 Whitelist LIHC-US 12_19 0.62 0.33 0 0 0.59 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 18 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 9 6482278 127861801 1 17 524 0 11 0 0 6 0 0.57 12 0 0 12 12 12 13 13 13 15.8 0.77 98.53 0 2 3 Whitelist LIHC-US 12 0.01 0.8 0 0 0 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 28 0.03 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 10 21700313 62124909 2 2 524 0 0 1 1 0 0.57 0.46 1 0 0 NA NA NA 18 12 12 15.8 38.54 61.27 0 2 NA Whitelist LIHC-US 0.68 0.71 0 0 0.64 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 4 0 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 11 9340114 77018016 1 16 524 1 6 0 0 9 0 0.06 15 0 0 15 7 15 20 7 15 15.8 25.94 73.64 0 2 3 Whitelist LIHC-US 15_X 0.02 0.19 0 0 0.09 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 23 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 12 106261894 106677126 3 5 524 1 0 0 2 2 0.3 0 5 0 0 5 5 5 42 15 21 15.8 2.34 93.51 0 2 3 Whitelist LIHC-US 8 0.68 0.02 0 0 0.59 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 8 0.01 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 13 100557166 100762281 2 2 524 0 2 0 0 0 0.11 0.4 2 0 0 NA NA NA 8 5 5 15.8 32.87 67.13 0 2 4 Whitelist LIHC-US 0.54 0.65 0 0 0.48 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 4 0 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 14 25556654 90170623 19 29 524 7 5 3 4 10 0.61 0 23 0 0 23 7 23 25 7 7 15.8 26.35 73.65 0 2 3 Whitelist LIHC-US 1_7 0.88 0 0 0 0.68 0 High confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC With other complex events 48 0.05 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 15 29951669 100680251 1 14 524 0 6 0 0 8 0 0.14 11 0 0 11 9 11 11 9 11 15.8 0.8 99.08 0 2 3 Whitelist LIHC-US 11 0.62 0.34 0 0 0.03 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 20 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 16 25250822 30860384 6 21 524 3 1 1 1 15 0.57 0 22 0 0 22 9 14 35 9 14 15.8 8.86 91.05 2 2 3 Whitelist LIHC-US 20 0.95 0 0 0 0.64 0 High confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC With other complex events 27 0.03 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 17 6752376 73621734 1 14 524 1 6 0 0 7 0 0.04 12 0 0 12 7 11 13 7 11 15.8 16.68 83.32 2 2 3 Whitelist LIHC-US 4_7 0.08 0.14 0 0 0.09 0 Linked to high confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC With other complex events 21 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 18 2966446 56300159 1 4 524 0 4 0 0 0 0.01 0.34 5 0 0 5 4 5 6 4 4 15.8 0.19 99.78 0 2 3 Whitelist LIHC-US 0.21 0.59 0 0 0.16 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 8 0.01 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 19 1158604 47770621 1 16 524 1 5 0 0 10 0.01 0.01 15 0 0 15 13 15 15 13 13 15.8 1.61 98.22 0 2 3 Whitelist LIHC-US 1_8 0.28 0.03 0 0 0.19 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 22 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 20 20959449 62129528 8 25 524 1 2 1 4 17 0.39 0 28 0 0 28 6 8 38 7 15 15.8 55.02 37.59 7 3 2 Whitelist LIHC-US 1_16_4_6 0.96 0 0 0 0.59 0 Low confidence LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC With other complex events 33 0.03 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 21 34547195 45262934 1 2 524 0 2 0 0 0 0.11 0.11 2 NA 0 NA NA NA NA NA NA 15.8 0.57 76.78 0 2 3 Whitelist LIHC-US 0.54 0.28 NA 0 0.48 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 4 0 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 22 17952505 42850840 1 8 524 1 4 0 0 3 0.04 0.07 8 0 0 8 7 8 10 7 7 15.8 17.03 82.97 0 2 3 Whitelist LIHC-US 0.54 0.2 0 0 0.36 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 13 0.01 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1987b453-f97d-45c7-9c89-b9a33313d645 X 31286763 116414502 1 9 524 1 6 0 0 2 0 0 14 0 0 14 8 14 17 9 9 15.8 0.25 99.52 0 2 3 Whitelist LIHC-US 11 0.12 0.01 0 0 0.09 0 No LIHC-US 1987b453-f97d-45c7-9c89-b9a33313d645 LIHC 0.74 1.99 Liver-HCC NA 16 0.02 NA 0 LIHC-US DO52307 TCGA-PD-A5DF 1987b453-f97d-45c7-9c89-b9a33313d645 female deceased C22.0 58 639 NA NA Included Liver-HCC LIHC US 1 21.02 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 1 16463314 189668831 1 3 73 2 1 0 0 0 0.3 0.66 9 0.02 0 9 3 4 12 3 5 68.7 48.39 48.61 0 6 5 Whitelist LIHC-US 0.62 0.87 0.02 0 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 6 0.04 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 2 58217049 58330752 1 1 73 1 0 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 68.7 99.89 0 0 3 NA Whitelist LIHC-US 0.62 0.53 0 NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 3 17167852 79864763 1 2 73 1 1 0 0 0 0.57 0.24 1 NA 0 NA NA NA NA NA NA 68.7 99.97 0 0 3 NA Whitelist LIHC-US 0.68 0.48 NA 0 0.64 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 4 0.03 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 4 4938907 28861724 2 7 73 1 0 0 1 5 0.57 0.03 6 0 0 6 4 6 9 4 9 68.7 34.35 65.54 0 4 3 Whitelist LIHC-US 14 0.62 0.11 0 0 0.64 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 9 0.06 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 5 101001984 106101428 1 2 73 2 0 0 0 0 0.11 1 3 0 0 NA NA NA NA NA NA 68.7 99.87 0 0 3 4 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 4 0.03 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 6 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 7 13836652 16007076 1 1 73 1 0 0 0 0 0.39 0.29 2 0 NA NA NA NA 4 4 4 68.7 2.11 97.64 0 1 2 Whitelist LIHC-US 0.62 0.53 0 NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 8 9192215 29681414 4 15 73 1 1 2 0 11 0.57 0 8 0 0 8 4 4 11 4 5 68.7 52.87 47.12 0 1 4 Whitelist LIHC-US 14 0.68 0 0 0 0.64 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 19 0.13 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 9 10636834 76784009 3 3 73 1 0 1 1 0 0.8 0.21 8 0 0 8 8 8 12 9 10 68.7 99.42 0.44 0 1 3 Whitelist LIHC-US 0.87 0.44 0 0 0.84 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 6 0.04 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 10 90955758 91016505 1 1 73 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 68.7 99.78 0.04 0 2 3 Whitelist LIHC-US 0.62 0.51 NA NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 11 NA NA 0 0 73 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 0 NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 12 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 13 48899115 49033234 1 1 73 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 68.7 46.18 53.82 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 14 38740148 80765230 5 15 73 3 0 1 1 10 0.28 0 17 0 0 17 5 5 19 5 5 68.7 57.45 41.63 0 2 3 Whitelist LIHC-US 0.68 0 0 0 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 20 0.14 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 15 93584785 93600630 1 1 73 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 68.7 99.86 0 0 3 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 16 50236333 50286159 1 1 73 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 68.7 0.06 99.93 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 17 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 18 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 19 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 20 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 21 21971510 21985745 1 1 73 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 68.7 77.35 0 0 4 NA Whitelist LIHC-US 0.62 0.46 NA NA 0.59 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 22 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 X NA NA 0 0 73 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.52 NA NA NA 0 No LIHC-US 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 LIHC 0.49 3.15 Liver-HCC NA 0 0 NA 3 LIHC-US DO22875 TCGA-CC-5261 1ad7f17e-b3b8-40e9-aab8-5a17e0aec408 male alive C22.0 44 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 1 NA NA 0 0 37 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.93 NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 2 NA NA 0 0 37 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 0 NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 3 86954044 114134453 1 3 37 3 0 0 0 0 0.03 0.74 3 0 0 NA NA NA NA NA NA 19.74 0.03 99.83 0 2 1 Whitelist LIHC-US 0.41 0.91 0 0 0.33 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 6 0.08 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 4 34625388 34773112 1 1 37 0 1 0 0 0 0.39 0.1 1 0 NA NA NA NA NA NA NA 19.74 0 99.77 0 2 NA Whitelist LIHC-US 0.62 0.26 0 NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 5 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 6 NA NA 0 0 37 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.9 NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 7 111073731 111094785 1 1 37 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 19.74 0 99.77 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 8 53566155 53582112 1 1 37 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 5 3 3 19.74 74.16 25.83 0 0 1 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 10 54308702 54322340 1 1 37 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.74 4.42 95.39 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 11 55497549 55544884 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.74 0.07 99.5 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 12 11778255 120691401 1 3 37 2 1 0 0 0 0.3 0.25 1 0.01 0 NA NA NA NA NA NA 19.74 0 99.92 0 2 NA Whitelist LIHC-US 0.62 0.49 0.01 0 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 6 0.08 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 15 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 16 26881420 79281745 1 2 37 1 1 0 0 0 0.57 0.26 4 NA 0 4 4 4 5 5 5 19.74 57.98 37.13 0 1 2 Whitelist LIHC-US 0.68 0.5 NA 0 0.64 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 4 0.05 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 17 16012367 16025430 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.74 27.33 68.22 0 1 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 19 56955435 56985172 1 1 37 0 0 0 1 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 19.74 0 99.83 0 2 NA Whitelist LIHC-US 0.62 0.76 NA NA 0.59 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 20 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::1b428ada-eb3f-40c2-b4bf-1bbf6b61729d X 62655745 68642490 9 13 37 1 3 2 3 4 0.75 0 1 0 0 NA NA NA NA NA NA 19.74 100 0 0 1 NA Whitelist LIHC-US 0.9 0 0 0 0.83 0 No LIHC-US 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d LIHC 0.4 1.89 Liver-HCC NA 22 0.3 NA 2 LIHC-US DO22953 TCGA-CC-5262 1b428ada-eb3f-40c2-b4bf-1bbf6b61729d male alive C22.0 67 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 1 179889389 247804194 3 4 94 2 1 0 0 1 0.3 0.7 5 0 0 5 5 5 13 5 5 21.39 54.3 42.42 0 3 2 Whitelist LIHC-US 0.54 0.9 0 0 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 7 0.04 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 2 NA NA 0 0 94 0 0 0 0 0 NA 0.58 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.8 0 NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 3 128404063 128414142 1 1 94 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 21.39 0 99.86 0 2 NA Whitelist LIHC-US 0.62 1 0 NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 4 124516110 125079451 2 2 94 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 21.39 69.42 30.47 0 1 NA Whitelist LIHC-US 0.68 1 0 0 0.64 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 5 23439134 86695927 1 3 94 2 1 0 0 0 0.3 0.39 6 0 0 6 5 6 7 5 5 21.39 8.66 91.2 0 2 1 Whitelist LIHC-US 0.62 0.64 0 0 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 6 0.03 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 6 34565684 130235062 1 4 94 0 0 3 1 0 0.11 0.51 2 0 0 NA NA NA 4 0 0 21.39 43.94 55.91 0 1 2 Whitelist LIHC-US 0.54 0.75 0 0 0.48 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 8 0.04 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 7 34559742 119418593 1 2 94 1 1 0 0 0 0.57 0.82 3 0 0 NA NA NA NA NA NA 21.39 7.13 92.64 0 2 3 Whitelist LIHC-US 0.68 0.96 0 0 0.64 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 8 3316363 8438625 1 1 94 0 0 0 1 0 0.39 1 1 0.01 NA NA NA NA 4 4 4 21.39 19.76 80.23 0 1 NA Whitelist LIHC-US 0.62 1 0.01 NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 9 8237723 23364870 1 1 94 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 21.39 0 99.3 0 2 NA Whitelist LIHC-US 0.62 0.81 NA NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 10 44802457 45362537 1 1 94 1 0 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 21.39 27.4 72.44 0 2 NA Whitelist LIHC-US 0.62 0.7 0 NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 11 28062806 110521630 1 2 94 1 1 0 0 0 0.57 0.45 2 0 0 NA NA NA NA NA NA 21.39 0.12 99.32 0 1 2 Whitelist LIHC-US 0.68 0.7 0 0 0.64 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 12 38095284 104647216 1 3 94 2 0 0 1 0 0.3 0.46 3 0 0 NA NA NA 4 4 4 21.39 9.84 90.08 0 2 1 Whitelist LIHC-US 0.62 0.7 0 0 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 6 0.03 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 13 87387230 87426561 2 2 94 0 0 1 1 0 0.57 0.14 1 0 0 NA NA NA 5 5 5 21.39 27.31 72.69 0 2 NA Whitelist LIHC-US 0.68 0.34 0 0 0.64 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 14 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 15 35696221 41749344 1 1 94 1 0 0 0 0 0.39 0.19 2 0 NA NA NA NA 6 4 4 21.39 51.32 48.41 0 1 2 Whitelist LIHC-US 0.62 0.41 0 NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 16 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 17 75674775 77107905 1 1 94 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 21.39 28.52 66.46 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 18 NA NA 0 0 94 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.76 NA NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 19 23697419 23711933 2 2 94 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 21.39 0.03 99.8 0 2 NA Whitelist LIHC-US 0.68 0.13 0 0 0.64 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 20 881096 23947675 1 1 94 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 21.39 0 99.01 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 21 NA NA 0 0 94 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 22 NA NA 0 0 94 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.27 NA NA NA 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::239b4298-b090-480a-a19f-9758a827aa30 X 15273848 136050704 2 4 94 0 0 2 2 0 0.26 0.48 1 0 0 NA NA NA NA NA NA 21.39 0 99.77 0 2 NA Whitelist LIHC-US 0.62 0.72 0 0 0.59 0 No LIHC-US 239b4298-b090-480a-a19f-9758a827aa30 LIHC 0.69 1.91 Liver-HCC NA 8 0.04 NA 2 LIHC-US DO23073 TCGA-G3-A25Y 239b4298-b090-480a-a19f-9758a827aa30 female deceased C22.0 52 452 NA NA Included Liver-HCC LIHC US 1 14.87 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 1 NA NA 0 0 21 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.22 NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 2 142231420 203816935 1 5 21 1 0 1 1 2 0.8 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.91 0 2 NA Whitelist LIHC-US 0.68 0.01 0 0 0.84 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 8 0.19 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 3 NA NA 0 0 21 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.18 NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 6 NA NA 0 0 21 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.03 0 NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 7 NA NA 0 0 21 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.27 NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 10 NA NA 0 0 21 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.06 NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 13 NA NA 0 0 21 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.12 NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 20 14198688 21380989 2 2 21 1 0 1 0 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 4.95 0 99.02 0 2 NA Whitelist LIHC-US 0.68 0.05 0 0 0.64 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 4 0.1 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 LIHC 0.59 1.95 Liver-HCC NA 0 0 NA 2 LIHC-US DO219580 TCGA-MR-A520 25e893ad-a0fd-45ae-9aa9-9bcd7c2ec8e5 male alive C22.0 58 NA 19 NA Included Liver-HCC LIHC US 0 0.62 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 1 217283140 217299281 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 77.31 100 0 0 6 7 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 2 184611141 197996965 8 8 43 3 2 1 2 0 0.8 0 17 0 0 17 4 8 25 4 8 77.31 99.86 0.06 0 4 6 Whitelist LIHC-US 0.87 0 0 0 0.84 0 Low confidence LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC With other complex events 16 0.19 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 3 NA NA 0 0 43 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.62 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 4 62831601 157220674 1 3 43 3 0 0 0 0 0.03 0.07 5 0 0 5 3 5 8 4 4 77.31 32.4 67.4 0 2 0 Whitelist LIHC-US 0.41 0.2 0 0 0.33 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 6 0.07 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 5 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 6 NA NA 0 0 43 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.76 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 7 74111136 74141292 1 1 43 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.31 44.9 54.88 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 8 69099190 69291238 1 1 43 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 4 4 77.31 68.4 28.18 0 2 6 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 9 331987 26664882 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.31 81.22 18.65 0 2 4 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 10 42955968 47108984 3 3 43 0 1 0 2 0 0.3 0 3 0 0 NA NA NA 13 5 5 77.31 98.52 1.3 0 5 4 Whitelist LIHC-US 0.62 0 0 0 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 6 0.07 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 12 NA NA 0 0 43 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.34 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 13 88627074 108184284 1 2 43 1 1 0 0 0 0.57 0.06 3 0 0 NA NA NA 4 0 4 77.31 100 0 0 3 6 Whitelist LIHC-US 0.68 0.19 0 0 0.64 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 4 0.05 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 16 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 17 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 18 36911118 36938338 1 1 43 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.31 99.96 0 0 3 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 19 NA NA 0 0 43 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.43 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2854ffe8-1f77-497a-bf49-11e0189fee35 X NA NA 0 0 43 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.9 NA NA NA 0 No LIHC-US 2854ffe8-1f77-497a-bf49-11e0189fee35 LIHC 0.69 3.74 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578449_A_C,CN:2 3 LIHC-US DO23048 TCGA-DD-A1EL 2854ffe8-1f77-497a-bf49-11e0189fee35 male deceased C22.0 23 415 NA NA Included Liver-HCC LIHC US 1 13.65 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 1 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 2 141839874 142057224 1 1 12 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 13.75 0 99.91 0 2 NA Whitelist LIHC-US 0.62 0.51 NA NA 0.59 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 2 0.08 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 3 NA NA 0 0 12 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.8 NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 7 69719212 69757256 1 1 12 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 13.75 0 99.77 0 2 NA Whitelist LIHC-US 0.62 0.73 NA NA 0.59 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 2 0.08 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 8 NA NA 0 0 12 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.31 NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 13 87736848 87747107 1 1 12 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 13.75 0 100 0 2 NA Whitelist LIHC-US 0.62 0.59 NA NA 0.59 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 2 0.08 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 14 NA NA 0 0 12 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.57 NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 17 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.52 NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 18 76874282 77078098 1 1 12 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 13.75 0.26 98.45 0 1 NA Whitelist LIHC-US 0.62 0.52 NA NA 0.59 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 2 0.08 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 20 14823358 14950088 1 1 12 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 13.75 0 98.99 0 2 NA Whitelist LIHC-US 0.62 0.46 NA NA 0.59 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 2 0.08 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::2d00f09f-0074-46c8-b357-b5f33567762a X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 2d00f09f-0074-46c8-b357-b5f33567762a LIHC 0.37 2.22 Liver-HCC NA 0 0 NA 2 LIHC-US DO49695 TCGA-HP-A5MZ 2d00f09f-0074-46c8-b357-b5f33567762a male deceased C22.0 78 91 NA NA Included Liver-HCC LIHC US 1 2.99 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 1 NA NA 0 0 19 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.4 NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 2 141732878 141829973 1 1 19 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 12.19 0.04 99.87 0 1 2 Whitelist LIHC-US 0.62 0.87 NA NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 4 157586282 162321005 1 2 19 2 0 0 0 0 0.11 0.37 4 NA 0 4 4 4 5 5 5 12.19 0.45 99.36 0 1 2 Whitelist LIHC-US 0.54 0.62 NA 0 0.48 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 4 0.11 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 7 75728877 133018248 1 2 19 0 2 0 0 0 0.11 0.27 2 NA 0 NA NA NA NA NA NA 12.19 0.04 99.72 0 2 4 Whitelist LIHC-US 0.54 0.51 NA 0 0.48 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 4 0.11 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 8 36853073 37327356 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.19 0.32 99.67 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 9 115293666 115403911 1 1 19 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 12.19 0 99.29 0 2 NA Whitelist LIHC-US 0.62 0.38 NA NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 10 21606936 21770677 1 1 19 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 12.19 0 99.82 0 2 NA Whitelist LIHC-US 0.62 0.81 NA NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 11 NA NA 0 0 19 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.81 NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 13 NA NA 0 0 19 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.73 NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 16 NA NA 0 0 19 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.65 NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 17 27502858 27513314 1 1 19 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 12.19 53.74 46.24 0 2 NA Whitelist LIHC-US 0.62 0.01 0 NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 19 4886789 4973302 1 1 19 0 1 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 12.19 0.15 99.38 0 2 3 Whitelist LIHC-US 0.62 0.57 NA NA 0.59 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::39eb1db0-2722-4af4-8254-d0e10256c64d X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 39eb1db0-2722-4af4-8254-d0e10256c64d LIHC 0.69 2.02 Liver-HCC NA 0 0 NA 2 LIHC-US DO22839 TCGA-G3-A3CK 39eb1db0-2722-4af4-8254-d0e10256c64d male alive C22.0 61 NA 27 NA Included Liver-HCC LIHC US 0 0.89 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 1 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 2 NA NA 0 0 222 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0 NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 3 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 4 42873535 172309080 2 3 222 0 0 1 1 1 0.57 0.11 17 0 0 17 4 9 29 4 5 73.98 40.44 56.98 2 3 2 Whitelist LIHC-US 0.62 0.28 0 0 0.64 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 5 0.01 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 5 141997 63388893 71 114 222 23 17 17 14 43 0.49 0 138 0 0 138 7 14 141 7 9 73.98 90.19 7.13 9 4 7 Whitelist LIHC-US 0.62 0 0 0 0.64 1 High confidence LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC With other complex events 185 0.42 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 6 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 7 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 8 96013794 96066422 1 1 222 0 0 0 1 0 0.39 0.88 1 0 NA NA NA NA 14 4 4 73.98 69.89 26.69 0 17 NA Whitelist LIHC-US 0.62 1 0 NA 0.59 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 2 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 9 6739657 10343803 1 6 222 1 0 1 1 3 0.8 0.08 8 0 0 8 6 8 16 8 9 73.98 72.94 26.36 0 4 2 Whitelist LIHC-US 0.93 0.23 0 0 0.84 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 9 0.02 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 10 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 11 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 12 1338333 85249346 1 5 222 1 1 1 0 2 0.8 0.2 4 0.03 0.01 4 3 4 4 3 3 73.98 99.92 0 0 4 3 Whitelist LIHC-US 0.93 0.43 0.03 0.01 0.84 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 8 0.02 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 13 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 14 34361058 105047156 10 31 222 4 0 2 4 21 0.22 0 21 0 0 21 4 5 45 4 5 73.98 29.92 66.37 0 2 4 Whitelist LIHC-US 5 0.68 0 0 0 0.59 1 Low confidence LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC With other complex events 41 0.09 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 15 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 16 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 17 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 18 38044123 38056591 1 1 222 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 73.98 99.9 0 0 4 NA Whitelist LIHC-US 0.62 0.12 NA NA 0.59 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 2 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 19 9401647 23672451 3 24 222 0 2 1 3 18 0.34 0 23 0 0 23 3 4 23 3 4 73.98 63.77 27.72 3 2 12 Whitelist LIHC-US 5_9 0.68 0 0 0 0.59 1 Linked to high confidence LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC With other complex events 30 0.07 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 20 NA NA 0 0 222 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.26 NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 21 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 22 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 0 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3acf7438-fd65-442c-8a30-68b6714537f3 X 89100029 89233715 1 1 222 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 73.98 0 100 0 2 NA Whitelist LIHC-US 0.62 0 NA NA 0.59 1 No LIHC-US 3acf7438-fd65-442c-8a30-68b6714537f3 LIHC 0.36 3.55 Liver-HCC NA 2 0 stopgain,17_7578419_A_C,CN:2 4 LIHC-US DO22959 TCGA-DD-A1EI 3acf7438-fd65-442c-8a30-68b6714537f3 male alive C22.0 46 NA 183 NA Included Liver-HCC LIHC US 0 6.02 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 1 1287883 219155783 1 3 26 3 0 0 0 0 0.03 0.45 6 0.32 0.01 6 5 6 7 6 7 9.58 54.45 42.01 0 1 2 Whitelist LIHC-US 0.41 0.7 0.32 0.01 0.33 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 6 0.12 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 3 58978545 60004621 1 1 26 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.58 23.87 73.07 0 1 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 2 0.04 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 4 172605228 181948842 1 2 26 1 1 0 0 0 0.57 0.69 3 NA 0 NA NA NA NA NA NA 9.58 0.1 99.88 0 2 3 Whitelist LIHC-US 0.68 0.89 NA 0 0.64 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 4 0.08 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 6 26067686 26205960 3 3 26 1 0 1 1 0 0.8 0.02 3 0 0 NA NA NA 4 3 3 9.58 14.12 85.64 0 2 1 Whitelist LIHC-US 0.87 0.07 0 0 0.84 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 6 0.12 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 7 76954156 137534255 1 2 26 1 1 0 0 0 0.57 0.16 2 NA 0 NA NA NA NA NA NA 9.58 0.41 99.36 0 2 3 Whitelist LIHC-US 0.68 0.37 NA 0 0.64 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 4 0.08 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 9 139748276 139796102 1 1 26 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 9.58 63.43 33.35 0 1 NA Whitelist LIHC-US 0.62 0.51 NA NA 0.59 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 2 0.04 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 10 67245691 125216884 3 3 26 0 1 1 1 0 0.8 0.03 4 0 0 4 4 4 5 5 5 9.58 0.06 99.76 0 1 2 Whitelist LIHC-US 0.87 0.11 0 0 0.84 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 6 0.12 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 11 67621529 69939149 1 1 26 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 9.58 1.72 97.72 0 2 3 Whitelist LIHC-US 0.62 0.59 NA NA 0.59 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 2 0.04 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 12 4363469 4421763 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.58 0.04 99.87 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 2 0.04 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 13 91717897 114992539 1 3 26 0 3 0 0 0 0.03 0.06 4 0 0 4 3 4 5 3 5 9.58 0.38 85.31 0 4 2 Whitelist LIHC-US 0.41 0.18 0 0 0.33 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 6 0.12 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 22 26921466 27020688 1 1 26 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 9.58 0 76.22 0 2 NA Whitelist LIHC-US 0.62 0.51 NA NA 0.59 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 2 0.04 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::3dd7c93d-8194-44ee-8014-10dd81ef6441 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 3dd7c93d-8194-44ee-8014-10dd81ef6441 LIHC 0.53 2 Liver-HCC NA 0 0 NA 2 LIHC-US DO22978 TCGA-FV-A3R3 3dd7c93d-8194-44ee-8014-10dd81ef6441 female alive C22.0 38 NA 4 NA Included Liver-HCC LIHC US 0 0.13 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 1 153400509 198188261 3 6 690 0 6 0 0 0 0 0.67 27 0 0 27 5 14 97 12 23 28.22 51.66 48.34 0 3 5 Whitelist LIHC-US 0.04 0.87 0 0 0.03 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 12 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 2 9819885 12384330 4 4 690 0 4 0 0 0 0.01 0.78 9 0 0 9 7 9 106 21 21 28.22 26.2 73.7 0 4 5 Whitelist LIHC-US 0.21 0.94 0 0 0.16 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 8 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 3 11663640 13524352 3 3 690 0 3 0 0 0 0.03 0.88 3 0 0 NA NA NA 75 12 19 28.22 21.92 78.05 0 2 3 Whitelist LIHC-US 0.41 1 0 0 0.33 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 6 0 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 4 15852769 177944792 2 6 690 0 6 0 0 0 0 0.25 45 0 0 45 14 16 56 14 16 28.22 14.16 85.82 0 3 2 Whitelist LIHC-US 0.04 0.49 0 0 0.03 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 12 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 5 130189137 149619578 8 8 690 0 5 2 1 0 0.07 0.48 25 0 0 25 4 6 57 13 13 28.22 16.6 83.06 0 3 2 Whitelist LIHC-US 0.54 0.72 0 0 0.48 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 16 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 6 42615061 100972584 3 6 690 0 6 0 0 0 0 0.94 25 0 0 25 9 18 71 18 22 28.22 21.36 78.48 0 3 2 Whitelist LIHC-US 0.04 1 0 0 0.03 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 12 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 7 113755982 116659718 7 7 690 3 4 0 0 0 0.06 0.03 10 0 0 10 0 3 80 11 11 28.22 50.25 47 0 3 4 Whitelist LIHC-US 0.54 0.12 0 0 0.48 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 14 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 8 94743333 136006935 5 11 690 0 10 0 0 1 0 0.3 30 0 0 30 9 9 73 9 14 28.22 86.71 9.61 0 4 3 Whitelist LIHC-US 0 0.54 0 0 0 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 21 0.02 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 9 33405632 37129539 5 5 690 0 5 0 0 0 0 0.28 14 0 0 14 7 10 38 14 14 28.22 27.48 72.34 0 4 5 Whitelist LIHC-US 0.1 0.52 0 0 0.07 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 10 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 10 3214694 104737634 3 11 690 0 7 1 1 2 0 0.14 38 0 0 38 9 18 64 11 11 28.22 25.14 74.69 0 3 2 Whitelist LIHC-US 0.41 0.34 0 0 0.11 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 20 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 11 68152361 71634307 5 5 690 1 4 0 0 0 0.04 0.53 10 0 0 10 3 10 48 9 20 28.22 15.07 84.5 0 5 6 Whitelist LIHC-US 0.45 0.76 0 0 0.36 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 10 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 12 68789178 118591962 3 6 690 0 6 0 0 0 0 0.03 29 0 0 29 5 14 77 6 9 28.22 28.29 71.63 0 3 2 Whitelist LIHC-US 0.04 0.11 0 0 0.03 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 12 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 13 93277231 100829519 3 8 690 0 4 1 1 2 0.11 0.92 13 0 0 13 5 12 40 16 21 28.22 11.92 88.08 1 3 4 Whitelist LIHC-US 15 0.54 1 0 0 0.48 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 14 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 14 30110093 33088143 3 3 690 0 3 0 0 0 0.03 0.58 6 0 0 6 3 6 36 8 8 28.22 15.67 84.33 0 3 4 Whitelist LIHC-US 0.41 0.81 0 0 0.33 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 6 0 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 15 25612423 95231017 1 20 690 1 16 0 0 3 0 0.82 30 0 0 30 13 16 35 15 18 28.22 38.07 57.03 0 3 2 Whitelist LIHC-US 13 0 0.96 0 0 0 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 37 0.03 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 16 85679110 87660488 3 3 690 0 3 0 0 0 0.03 0.48 6 0 0 6 3 6 30 16 16 28.22 18.34 81.14 0 3 4 Whitelist LIHC-US 0.41 0.72 0 0 0.33 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 6 0 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 17 57202602 59121864 6 6 690 1 5 0 0 0 0.01 0.16 11 0 0 11 5 9 34 9 9 28.22 23.56 71.99 0 6 7 Whitelist LIHC-US 0.25 0.36 0 0 0.19 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 12 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 18 2523032 72108189 1 12 690 0 10 0 1 1 0 0.16 15 0 0 15 15 15 15 15 15 28.22 9.52 90.44 0 2 3 Whitelist LIHC-US 0.01 0.36 0 0 0 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 23 0.02 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 19 1158334 4200206 3 4 690 1 2 0 0 1 0.3 0.34 7 0 0 7 3 3 33 6 14 28.22 27.06 65.67 0 3 4 Whitelist LIHC-US 0.54 0.59 0 0 0.59 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 7 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 20 43001913 46876883 3 3 690 0 2 1 0 0 0.3 0.05 6 0 0 6 4 5 33 10 14 28.22 41.82 50.79 0 2 3 Whitelist LIHC-US 0.62 0.16 0 0 0.59 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 6 0 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 21 23539403 35353442 1 4 690 1 3 0 0 0 0.11 0.16 6 0 0 6 6 6 7 7 7 28.22 4.09 73.26 0 2 3 Whitelist LIHC-US 0.54 0.37 0 0 0.48 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 8 0.01 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d 22 17910494 50713692 1 12 690 0 10 0 0 2 0 0.21 23 0 0 23 17 17 25 17 17 28.22 53.02 34.72 0 3 2 Whitelist LIHC-US 0 0.44 0 0 0 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 22 0.02 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::440375d7-cdcd-418a-8992-0a8ca42d290d X 152678266 154335326 3 3 690 1 1 0 1 0 0.8 0.26 6 0 0 6 3 5 38 16 16 28.22 21.71 74.9 0 4 1 Whitelist LIHC-US 0.87 0.5 0 0 0.84 0 No LIHC-US 440375d7-cdcd-418a-8992-0a8ca42d290d LIHC 0.63 2.34 Liver-HCC NA 6 0 NA 6 LIHC-US DO23023 TCGA-EP-A2KA 440375d7-cdcd-418a-8992-0a8ca42d290d female alive C22.0 52 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 1 240098904 240112923 1 1 137 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 9 4 4 82.3 42.41 57.59 0 7 8 Whitelist LIHC-US 0.62 0.1 0 NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 2 226813900 227680427 1 1 137 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 82.3 97.27 0 0 5 6 Whitelist LIHC-US 0.62 0 NA NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 3 41762432 185630601 1 2 137 2 0 0 0 0 0.11 0.06 3 0.23 0 NA NA NA 4 3 3 82.3 96.79 0.04 0 2 3 Whitelist LIHC-US 0.54 0.2 0.23 0 0.48 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 4 74274143 74413274 1 1 137 0 1 0 0 0 0.39 0.17 1 0 NA NA NA NA 6 3 4 82.3 68.4 29.23 0 2 NA Whitelist LIHC-US 0.62 0.39 0 NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 5 143731020 144925081 2 2 137 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 82.3 99.86 0 0 4 NA Whitelist LIHC-US 0.68 0.16 0 0 0.64 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 6 12572594 75234036 1 3 137 0 1 1 1 0 0.8 0.15 2 0 0 NA NA NA NA NA NA 82.3 99.85 0 0 3 6 Whitelist LIHC-US 0.87 0.35 0 0 0.84 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 6 0.02 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 7 93347030 153529978 1 2 137 2 0 0 0 0 0.11 0.57 2 0 0 NA NA NA NA NA NA 82.3 99.78 0 0 3 4 Whitelist LIHC-US 0.54 0.79 0 0 0.48 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 8 41016513 53511362 6 6 137 3 1 1 1 0 0.57 0 5 0 0 5 5 5 20 14 14 82.3 67.6 28.86 1 3 2 Whitelist LIHC-US 0.68 0.01 0 0 0.64 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 12 0.04 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 9 92811966 92832876 1 1 137 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 82.3 99.3 0 0 3 NA Whitelist LIHC-US 0.62 0.16 NA NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 10 113913825 114010336 1 1 137 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 82.3 99.82 0 0 5 6 Whitelist LIHC-US 0.62 0.09 NA NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 11 23326081 23354008 1 2 137 1 0 1 0 0 0.57 0.22 2 0 0 NA NA NA NA NA NA 82.3 99.57 0 0 3 4 Whitelist LIHC-US 0.68 0.45 0 0 0.64 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 12 NA NA 0 0 137 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIHC-US NA 0.09 NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 13 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 14 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 15 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 16 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 17 57017 81011331 66 66 137 18 13 17 18 0 0.79 0 20 0 0 20 7 12 20 7 12 82.3 93.32 1.32 3 4 5 Whitelist LIHC-US 0.87 0 0 0 0.84 1 High confidence LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC With other complex events 132 0.48 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 18 23964514 25177313 2 4 137 0 1 1 0 2 0.57 0.79 5 0 0 5 5 5 6 6 6 82.3 31.29 68.68 0 2 4 Whitelist LIHC-US 0.62 0.94 0 0 0.64 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 6 0.02 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 19 8778812 22442312 10 10 137 1 3 3 3 0 0.75 0 19 0 0 19 9 19 22 9 9 82.3 99.83 0 0 5 6 Whitelist LIHC-US 0.86 0 0 0 0.83 1 High confidence LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC With other complex events 20 0.07 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 20 19826303 19864795 1 1 137 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 82.3 99.01 0 0 5 6 Whitelist LIHC-US 0.62 0.63 NA NA 0.59 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 21 NA NA 0 0 137 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 22 NA NA 0 0 137 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::457cca7c-a8b4-414e-a3c0-7fccf0ee2034 X NA NA 0 0 137 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.58 0 NA NA 1 No LIHC-US 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 LIHC 0.48 3.87 Liver-HCC NA 0 0 NA 4 LIHC-US DO44888 TCGA-DD-A3A9 457cca7c-a8b4-414e-a3c0-7fccf0ee2034 female deceased C22.0 64 931 NA NA Included Liver-HCC LIHC US 1 30.62 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 1 53503836 192549016 4 33 445 1 5 1 1 25 0.11 0 42 0 0 42 11 25 62 11 11 18.24 81.05 18.92 0 3 4 Whitelist LIHC-US 17_2 0.68 0 0 0 0.48 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 41 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 False positive; manually removed LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 2 85528204 99868582 8 8 445 2 3 2 1 0 0.8 0.02 4 0 0 4 4 4 31 12 13 18.24 6.43 93.47 1 2 3 Whitelist LIHC-US 0.87 0.07 0 0 0.84 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 16 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 3 71650669 72274262 3 3 445 0 1 1 1 0 0.8 0.03 3 0 0 NA NA NA 30 8 8 18.24 4.18 95.78 0 2 3 Whitelist LIHC-US 0.87 0.12 0 0 0.84 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 4 122743078 180614894 3 5 445 0 1 1 1 2 0.8 0.02 7 0 0 7 3 7 22 5 5 18.24 1.36 98.63 0 2 3 Whitelist LIHC-US 17 0.68 0.09 0 0 0.84 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 5 67855654 149051202 1 13 445 2 3 0 0 8 0.14 1 10 0 0 10 3 8 19 5 6 18.24 58.89 40.98 0 2 1 Whitelist LIHC-US 1 0.8 1 0 0 0.59 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 18 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 6 36997592 43940332 2 22 445 0 4 0 0 18 0.01 0.16 8 0 0 8 3 4 20 10 10 18.24 1.31 98.55 0 2 3 Whitelist LIHC-US 1_15_17_2 0.62 0.37 0 0 0.16 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 26 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 7 23148420 87591842 2 4 445 1 3 0 0 0 0.11 0.83 10 0 0 10 6 9 20 6 6 18.24 13.11 86.66 0 2 3 Whitelist LIHC-US 0.54 0.97 0 0 0.48 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 8 133832368 134187949 3 3 445 0 3 0 0 0 0.03 0.28 1 0 0 NA NA NA 16 6 6 18.24 28.82 71.18 0 2 NA Whitelist LIHC-US 0.41 0.52 0 0 0.33 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 9 9580397 92716735 2 6 445 2 2 0 0 2 0.26 0.18 16 0 0 16 8 16 21 8 8 18.24 2.22 97.08 0 3 2 Whitelist LIHC-US 0.54 0.39 0 0 0.59 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 10 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 10 32921071 91266460 3 6 445 0 4 1 1 0 0.11 0 17 0 0 17 5 15 39 5 7 18.24 6.44 93.38 0 3 2 Whitelist LIHC-US 0.54 0.01 0 0 0.48 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 12 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 11 99643778 130179884 7 9 445 4 1 2 0 2 0.17 0 12 0 0 12 3 12 41 13 13 18.24 2.11 97.47 0 2 1 Whitelist LIHC-US 0.62 0 0 0 0.59 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 16 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 12 100171704 101259141 3 5 445 0 1 1 1 2 0.8 0.91 7 0 0 7 3 5 32 9 9 18.24 7.5 92.42 0 2 3 Whitelist LIHC-US 0.68 1 0 0 0.84 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 13 24573019 113831620 1 9 445 3 3 1 0 2 0.28 0.19 12 0 0 12 7 12 13 7 7 18.24 0.84 99.16 0 2 1 Whitelist LIHC-US 0.85 0.41 0 0 0.59 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 16 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 14 21678108 106111063 1 16 445 4 8 0 0 4 0 0.58 18 0 0 18 6 18 18 6 6 18.24 3.62 95.46 0 2 3 Whitelist LIHC-US 0.16 0.81 0 0 0.08 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 28 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 15 62559317 62899221 2 2 445 0 0 1 1 0 0.57 0 4 0 0 4 4 4 32 13 13 18.24 26.33 73.57 0 1 2 Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 16 67889490 75073010 3 4 445 0 1 2 0 1 0.3 0.55 3 0 0 NA NA NA 16 9 9 18.24 66.03 33.65 0 1 2 Whitelist LIHC-US 0.62 0.78 0 0 0.59 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 7 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 17 8805223 79503106 2 13 445 0 0 0 2 11 0.11 0 11 0 0 11 7 10 17 7 7 18.24 4.85 90.71 0 2 3 Whitelist LIHC-US 1_2 0.68 0.02 0 0 0.48 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 15 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 18 19345283 30629133 2 4 445 1 2 0 1 0 0.57 0.46 10 0 0 10 5 5 21 9 9 18.24 57.07 37.9 0 2 1 Whitelist LIHC-US 0.68 0.71 0 0 0.64 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 19 4681739 5081982 2 2 445 0 1 1 0 0 0.57 0.86 3 0 0 NA NA NA 13 13 13 18.24 2.18 97.65 0 2 3 Whitelist LIHC-US 0.68 1 0 0 0.64 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 20 389873 49189472 1 4 445 0 3 1 0 0 0.11 0.19 4 0 0 4 4 4 5 5 5 18.24 0.53 98.48 0 2 3 Whitelist LIHC-US 0.54 0.41 0 0 0.48 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 21 34562346 45354226 1 4 445 0 4 0 0 0 0.01 0.83 6 0 0 6 6 6 7 7 7 18.24 0.52 76.84 0 2 3 Whitelist LIHC-US 0.21 0.97 0 0 0.16 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 22 37419598 37488533 2 2 445 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 26 7 7 18.24 2.88 95.48 0 2 1 Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::4bbdbe77-f3cb-4b64-9826-72debb734784 X 128547952 128679695 2 2 445 1 1 0 0 0 0.57 0.04 1 0 0 NA NA NA 9 5 5 18.24 2.41 97.36 0 2 NA Whitelist LIHC-US 0.68 0.14 0 0 0.64 0 No LIHC-US 4bbdbe77-f3cb-4b64-9826-72debb734784 LIHC 0.82 2.08 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 LIHC-US DO22929 TCGA-BC-A216 4bbdbe77-f3cb-4b64-9826-72debb734784 female alive C22.0 62 NA 1144 NA Included Liver-HCC LIHC US 0 37.63 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 1 32093445 227479081 1 9 129 2 2 1 0 4 0.53 0.51 11 0 0 11 8 11 15 8 8 83.45 83.88 16.12 0 4 5 Whitelist LIHC-US 0.85 0.75 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 14 0.05 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 2 9781345 112866585 1 5 129 1 4 0 0 0 0.04 0.08 8 0 0 8 3 4 9 3 4 83.45 99.91 0 0 4 3 Whitelist LIHC-US 0.45 0.22 0 0 0.36 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 10 0.04 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 3 8496576 23273479 2 8 129 1 1 0 2 4 0.57 0 7 0 0 7 3 3 17 3 5 83.45 95.37 4.5 0 4 5 Whitelist LIHC-US 1 0.62 0.01 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 12 0.05 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 4 39768992 155784747 2 8 129 0 1 1 0 6 0.57 0 9 0 0 9 3 7 20 4 5 83.45 99.97 0 0 3 4 Whitelist LIHC-US 1_14 1 0 0 0 0.64 0 Linked to low confidence LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC With other complex events 10 0.04 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 5 28813895 162945458 1 6 129 2 2 0 0 2 0.26 0.59 7 0 0 7 3 5 7 3 5 83.45 99.8 0.06 0 3 2 Whitelist LIHC-US 0.54 0.81 0 0 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 10 0.04 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 6 35185595 131639302 2 2 129 0 0 1 1 0 0.57 0.36 7 0 0 7 7 7 12 7 7 83.45 96.71 0.06 0 3 5 Whitelist LIHC-US 0.68 0.61 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 4 0.02 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 7 NA NA 0 0 129 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.07 NA NA NA 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 0 0 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 8 66967723 69160044 15 20 129 6 3 4 2 5 0.51 0 15 0 0 15 3 5 25 5 6 83.45 99.3 0.7 0 4 1 Whitelist LIHC-US 0.66 0 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 35 0.14 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 9 73521803 120237012 2 3 129 1 0 1 0 1 0.57 0.17 1 0 0 NA NA NA 7 7 7 83.45 99.84 0 0 3 NA Whitelist LIHC-US 0.62 0.38 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 5 0.02 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 10 13277048 13400500 1 2 129 1 0 1 0 0 0.57 0.29 4 0 0 4 3 4 5 3 3 83.45 99.82 0 0 5 3 Whitelist LIHC-US 0.68 0.54 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 4 0.02 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 11 66731083 67033844 1 1 129 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 83.45 99.57 0 0 3 NA Whitelist LIHC-US 0.62 0.12 NA NA 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 12 69425378 69472896 1 1 129 0 1 0 0 0 0.39 0.53 2 0 NA NA NA NA 6 3 4 83.45 79.99 19.93 0 4 5 Whitelist LIHC-US 0.62 0.76 0 NA 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 13 96359085 114560022 3 5 129 1 0 1 1 2 0.8 0.22 2 0 0 NA NA NA 5 3 3 83.45 99.43 0.04 0 2 4 Whitelist LIHC-US 0.93 0.45 0 0 0.84 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 8 0.03 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 14 20673089 49273351 6 8 129 3 2 1 0 2 0.34 0 12 0 0 12 5 12 17 5 5 83.45 13.79 67.48 0 3 2 Whitelist LIHC-US 0.68 0.01 0 0 0.59 0 Low confidence LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC With other complex events 14 0.05 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 15 NA NA 0 0 129 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.94 NA NA NA 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 0 0 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 16 50604374 87087861 2 4 129 0 0 1 1 2 0.57 0.78 6 0 0 6 3 4 7 3 5 83.45 59.65 40.25 0 2 4 Whitelist LIHC-US 14 1 0.94 0 0 0.64 0 Linked to low confidence LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC With other complex events 6 0.02 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 17 57950602 58301279 1 1 129 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 83.45 68.22 27.33 0 4 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 18 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 0 0 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 19 1076091 1109868 1 1 129 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 83.45 99.83 0 0 3 4 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 20 14691904 14939834 1 1 129 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 83.45 99.03 0 0 3 4 Whitelist LIHC-US 0.62 0.76 NA NA 0.59 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 21 NA NA 0 0 129 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.44 NA NA NA 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 0 0 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 22 36611225 42957907 2 2 129 0 0 1 1 0 0.57 0 4 0 0 4 4 4 9 5 8 83.45 100 0 0 5 7 Whitelist LIHC-US 0.68 0.02 0 0 0.64 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 4 0.02 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::52292ffc-0902-4d97-b461-20723987a177 X NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 52292ffc-0902-4d97-b461-20723987a177 LIHC 0.79 3.28 Liver-HCC NA 0 0 NA 4 LIHC-US DO22994 TCGA-DD-A1EJ 52292ffc-0902-4d97-b461-20723987a177 female alive C22.0 71 NA 887 NA Included Liver-HCC LIHC US 0 29.18 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 1 3589401 30700898 6 6 309 1 1 2 2 0 0.88 0.01 11 0 0 11 5 5 16 5 5 31.67 13.39 86.61 2 2 1 Whitelist LIHC-US 0.93 0.06 0 0 0.91 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 12 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 2 39815737 105596723 1 2 309 0 2 0 0 0 0.11 0 1 0.08 0 NA NA NA NA NA NA 31.67 0 99.9 0 2 NA Whitelist LIHC-US 0.54 0 0.08 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 3 13380862 197093518 1 6 309 2 4 0 0 0 0.06 0 1 0 0 NA NA NA NA NA NA 31.67 0 99.88 0 2 NA Whitelist LIHC-US 0.54 0 0 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 12 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 4 74309555 190780625 157 157 309 31 36 45 45 0 0.3 0 204 0 0 204 13 26 206 13 26 31.67 66.96 30.45 4 1 3 Whitelist LIHC-US 0.62 0 0 0 0.59 0 High confidence LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC With other complex events 314 0.51 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 5 103131057 123648397 1 6 309 2 1 0 1 2 0.57 0.1 3 0 0 NA NA NA 7 5 5 31.67 8.57 88.76 0 2 1 Whitelist LIHC-US 0.54 0.26 0 0 0.64 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 6 NA NA 0 0 309 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0 0 NA NA 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 7 65548993 127718300 1 3 309 1 2 0 0 0 0.3 0 5 0 0 5 0 3 5 0 3 31.67 55.1 44.67 0 2 4 Whitelist LIHC-US 0.62 0.01 0 0 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 8 124254490 124327945 1 1 309 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 31.67 99.84 0.05 0 2 3 Whitelist LIHC-US 0.62 0 NA NA 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 9 4927905 30615811 9 9 309 3 1 3 2 0 0.75 0.56 9 0 0 9 9 9 11 11 11 31.67 84.7 14.6 0 2 1 Whitelist LIHC-US 0.85 0.78 0 0 0.83 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 18 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 False positive; manually removed LIHC-US::56403463-1727-4c23-a709-de5f168c4073 10 24885994 126643245 1 5 309 1 2 1 1 0 0.9 0.34 6 0 0 6 3 6 10 6 6 31.67 19.88 79.91 3 2 3 Whitelist LIHC-US 0.93 0.59 0 0 0.92 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 11 20417889 97102670 1 4 309 1 3 0 0 0 0.11 0.02 1 0 0 NA NA NA NA NA NA 31.67 0 99.57 0 2 NA Whitelist LIHC-US 0.54 0.08 0 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 12 69852280 111918327 1 3 309 0 3 0 0 0 0.03 0.18 1 0 0 NA NA NA NA NA NA 31.67 14.67 85.24 0 2 NA Whitelist LIHC-US 0.41 0.39 0 0 0.33 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 13 48912694 48944038 1 1 309 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 31.67 48.04 37.8 0 1 NA Whitelist LIHC-US 0.62 0 NA NA 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 14 68470986 103680517 1 3 309 2 1 0 0 0 0.3 0.07 3 0 0 NA NA NA 4 3 3 31.67 81.17 0.12 0 1 0 Whitelist LIHC-US 0.62 0.21 0 0 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 15 40452081 40500744 1 1 309 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 31.67 0.05 84.38 0 1 2 Whitelist LIHC-US 0.62 0.02 NA NA 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 16 5663723 72666880 1 4 309 3 1 0 0 0 0.11 0.37 5 0 0 5 3 5 5 3 3 31.67 94.83 0.17 0 1 0 Whitelist LIHC-US 0.54 0.62 0 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 17 72706099 72722066 1 1 309 0 0 1 0 0 0.39 0.08 1 0.01 0 NA NA NA NA NA NA 31.67 27.33 68.22 0 2 NA Whitelist LIHC-US 0.62 0.22 0.01 0 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 18 40499139 53757981 14 14 309 4 3 4 3 0 0.96 0 7 0 0 7 7 7 10 7 7 31.67 94.27 1.09 0 1 2 Whitelist LIHC-US 0.98 0 0 0 0.98 0 High confidence LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC Canonical without polyploidization 28 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 19 2186351 49144131 1 9 309 1 4 0 1 3 0.11 0.06 5 0 0 5 4 5 6 4 6 31.67 6.77 93.06 1 1 2 Whitelist LIHC-US 0.62 0.19 0 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 15 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 20 30828130 59665853 1 2 309 0 2 0 0 0 0.11 0.23 1 0 0 NA NA NA NA NA NA 31.67 0 99.01 0 2 NA Whitelist LIHC-US 0.54 0.47 0 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 21 16078825 16321514 1 1 309 0 1 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 31.67 41.82 35.53 0 1 NA Whitelist LIHC-US 0.62 0.81 NA NA 0.59 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 22 NA NA 0 0 309 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.81 NA NA NA 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56403463-1727-4c23-a709-de5f168c4073 X 131673692 152640540 1 2 309 0 2 0 0 0 0.11 0.03 1 0.01 0 NA NA NA NA NA NA 31.67 1.29 98.71 0 2 NA Whitelist LIHC-US 0.54 0.1 0.01 0 0.48 0 No LIHC-US 56403463-1727-4c23-a709-de5f168c4073 LIHC 0.69 1.88 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIHC-US DO44974 TCGA-ED-A459 56403463-1727-4c23-a709-de5f168c4073 male alive C22.0 47 NA 7 NA Included Liver-HCC LIHC US 0 0.23 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 1 145474628 249083131 13 24 109 4 2 4 3 11 0.84 0 19 0 0 19 18 19 21 18 18 79.58 52.56 47.37 0 6 7 Whitelist LIHC-US 14_3 0.87 0 0 0 0.88 1 High confidence LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC After polyploidization 37 0.17 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 2 171731648 171746108 1 1 109 1 0 0 0 0 0.39 0.04 1 0 NA NA NA NA NA NA NA 79.58 99.89 0 0 5 NA Whitelist LIHC-US 0.62 0.13 0 NA 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 3 23541316 30879080 1 4 109 1 0 0 0 3 0.39 0.85 6 0 0 6 6 6 10 9 10 79.58 99.88 0 0 4 5 Whitelist LIHC-US 0.62 0.99 0 0 0.59 1 Linked to high confidence LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC After polyploidization 5 0.02 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 4 31682656 185369472 1 4 109 1 2 0 0 1 0.3 0.85 5 0 0 5 4 5 7 5 5 79.58 38.13 61.57 4 3 4 Whitelist LIHC-US 0.62 0.98 0 0 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 7 0.03 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 5 4504170 177032551 1 5 109 0 4 0 0 1 0.01 0.56 4 0 0 4 3 4 5 4 5 79.58 99.88 0 0 6 4 Whitelist LIHC-US 0.1 0.78 0 0 0.16 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 9 0.04 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 6 26936050 27364997 1 1 109 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 7 6 6 79.58 43.09 56.77 0 4 5 Whitelist LIHC-US 0.62 0.45 NA NA 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 7 92637274 92647633 1 1 109 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA 5 3 3 79.58 99 0.77 0 4 NA Whitelist LIHC-US 0.62 0.32 NA NA 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 8 38649834 143699005 1 10 109 1 1 0 1 7 0.8 0.01 11 0 0 11 4 6 13 4 5 79.58 99.89 0 0 4 1 Whitelist LIHC-US 0.68 0.06 0 0 0.84 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 13 0.06 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 9 NA NA 0 0 109 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.33 NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 10 25860990 58835419 2 5 109 1 0 1 0 3 0.57 0.17 3 0 0 NA NA NA 4 3 3 79.58 99.82 0 0 4 5 Whitelist LIHC-US 0.68 0.38 0 0 0.64 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 7 0.03 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 11 18090072 67334462 1 4 109 0 2 0 0 2 0.11 0.36 5 0 0 5 3 5 6 4 6 79.58 95.46 3.99 0 3 1 Whitelist LIHC-US 0.68 0.61 0 0 0.48 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 6 0.03 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 12 NA NA 0 0 109 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.74 NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 13 86737413 89599463 1 2 109 0 2 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 79.58 99.13 0 0 4 5 Whitelist LIHC-US 0.54 1 NA 0 0.48 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 14 29177804 36937610 1 8 109 0 1 0 1 6 0.57 0.01 6 0 0 6 5 6 9 7 7 79.58 95.29 3.79 0 3 2 Whitelist LIHC-US 0.68 0.04 0 0 0.64 1 Linked to high confidence LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC Canonical without polyploidization 10 0.05 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 15 NA NA 0 0 109 0 0 0 0 0 NA 0.55 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIHC-US NA 0.78 0 NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 16 47171740 47219761 1 3 109 0 1 0 0 2 0.39 0.54 3 NA 0 NA NA NA 6 4 5 79.58 9.52 85.96 0 2 4 Whitelist LIHC-US 0.87 0.77 NA 0 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 17 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 18 44688488 45038154 1 1 109 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 79.58 1.04 93.71 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 2 0.01 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 19 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 20 3053950 60453503 7 13 109 2 2 2 1 6 0.93 0 25 0 0 25 4 5 28 4 4 79.58 68.06 24.87 0 2 3 Whitelist LIHC-US 0.8 0 0 0 0.95 1 Low confidence LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC With other complex events 20 0.09 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 21 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 22 NA NA 0 0 109 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 0 0 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::56a82a56-0241-4d3d-9de2-696b0c36df91 X 27303901 93970882 5 8 109 2 1 1 1 3 0.9 0.01 3 0 0 NA NA NA 6 4 4 79.58 99.77 0 0 4 3 Whitelist LIHC-US 0.87 0.06 0 0 0.92 1 No LIHC-US 56a82a56-0241-4d3d-9de2-696b0c36df91 LIHC 0.88 3.52 Liver-HCC NA 13 0.06 NA 3 LIHC-US DO52172 TCGA-BW-A5NP 56a82a56-0241-4d3d-9de2-696b0c36df91 female alive C22.0 26 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 1 67682718 248354946 1 15 171 4 3 0 2 6 0.27 0.32 21 0 0 21 5 5 24 5 5 41.62 42.38 57.25 1 6 5 Whitelist LIHC-US 2_22 0.62 0.57 0 0 0.59 1 Linked to high confidence LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC With other complex events 24 0.07 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 2 124760110 188573775 6 7 171 3 2 0 1 1 0.34 0 21 0 0 21 10 18 31 10 10 41.62 33.14 66.77 0 3 4 Whitelist LIHC-US 0.62 0.02 0 0 0.59 1 High confidence LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC With other complex events 13 0.04 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 3 149614974 182514325 1 3 171 1 2 0 0 0 0.3 0 4 0 0 4 3 4 5 3 3 41.62 0.39 99.46 0 2 1 Whitelist LIHC-US 0.62 0.02 0 0 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 6 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 4 105139912 182620423 1 2 171 1 1 0 0 0 0.57 0 1 NA 0 NA NA NA NA NA NA 41.62 0 99.98 0 2 NA Whitelist LIHC-US 0.68 0.01 NA 0 0.64 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 4 0.01 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 5 169899087 174205207 5 5 171 1 2 1 1 0 0.9 0.43 5 0 0 5 5 5 13 5 5 41.62 99.81 0.03 0 4 5 Whitelist LIHC-US 0.93 0.68 0 0 0.92 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 10 0.03 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 6 63448509 112361461 16 17 171 4 5 4 3 1 0.92 0 4 0 0 4 4 4 18 16 16 41.62 22.46 74.71 0 2 3 Whitelist LIHC-US 0.87 0 0 0 0.94 1 Low confidence LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC Canonical without polyploidization 33 0.1 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 7 38005305 153970574 1 9 171 4 3 0 0 2 0.06 1 8 0 0 8 6 8 8 6 8 41.62 44.17 55.6 0 2 4 Whitelist LIHC-US 0.62 1 0 0 0.48 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 16 0.05 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 8 103718163 126870626 1 3 171 0 3 0 0 0 0.03 0.73 4 0 0 4 4 4 9 6 6 41.62 63.32 32.58 0 5 6 Whitelist LIHC-US 0.41 0.9 0 0 0.33 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 6 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 9 6634081 7043264 1 1 171 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 8 4 4 41.62 19.96 79.84 0 2 3 Whitelist LIHC-US 0.62 1 0 NA 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 2 0.01 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 10 5099203 93255993 1 4 171 2 2 0 0 0 0.26 0.71 7 0 0 7 5 7 8 6 6 41.62 4.09 95.74 0 2 3 Whitelist LIHC-US 0.62 0.9 0 0 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 8 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 11 31002708 99604205 1 4 171 2 2 0 0 0 0.26 0.2 6 0 0 6 5 6 7 5 5 41.62 0.56 99.01 0 2 3 Whitelist LIHC-US 0.62 0.42 0 0 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 8 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 12 89885351 111117441 1 4 171 3 1 0 0 0 0.11 0.36 6 0 0 6 3 6 8 4 4 41.62 96.26 0 0 4 1 Whitelist LIHC-US 0.54 0.62 0 0 0.48 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 8 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 13 100116690 100185717 1 1 171 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 41.62 100 0 0 3 4 Whitelist LIHC-US 0.62 0.33 NA NA 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 2 0.01 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 14 94753141 94973357 1 1 171 0 1 0 0 0 0.39 0.5 2 0 NA NA NA NA 6 5 6 41.62 98.32 0.77 0 1 2 Whitelist LIHC-US 0.62 0.75 0 NA 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 2 0.01 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 15 NA NA 0 0 171 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.26 NA NA NA 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 0 0 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 16 4276372 4388036 1 1 171 0 1 0 0 0 0.39 1 2 0.01 NA NA NA NA 5 3 3 41.62 0.68 99.23 0 2 3 Whitelist LIHC-US 0.62 1 0.01 NA 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 2 0.01 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 17 NA NA 0 0 171 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 0 0 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 18 38120857 75801078 1 3 171 1 1 0 1 0 0.8 1 2 0 0 NA NA NA NA NA NA 41.62 0.05 99.89 0 1 2 Whitelist LIHC-US 0.87 1 0 0 0.84 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 6 0.02 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 19 639719 48553795 1 5 171 2 1 1 0 1 0.57 0.05 13 0 0 13 6 6 16 8 8 41.62 62.23 37.59 0 3 4 Whitelist LIHC-US 0.68 0.17 0 0 0.64 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 9 0.03 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 20 14272702 51759062 1 5 171 2 3 0 0 0 0.14 0.42 9 0 0 9 3 5 10 3 5 41.62 50.82 41.49 0 3 2 Whitelist LIHC-US 0.62 0.67 0 0 0.59 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 10 0.03 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 21 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 0 0 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 22 17018899 48999964 25 31 171 7 5 8 5 6 0.78 0 18 0 0 18 9 18 18 9 9 41.62 18.37 81.63 0 2 3 Whitelist LIHC-US 0.68 0 0 0 0.84 1 High confidence LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC With other complex events 56 0.16 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::614c0ecf-6a84-4c86-8706-79be5bb00991 X NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 614c0ecf-6a84-4c86-8706-79be5bb00991 LIHC 0.82 2.44 Liver-HCC NA 0 0 stopgain,17_7578525_T_G,CN:1 4 LIHC-US DO44982 TCGA-DD-A3A7 614c0ecf-6a84-4c86-8706-79be5bb00991 male deceased C22.0 67 419 NA NA Included Liver-HCC LIHC US 1 13.78 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 1 82628681 155977459 1 4 54 1 1 0 0 2 0.57 0.32 2 0 0 NA NA NA NA NA NA 33.06 0.08 99.92 0 1 2 Whitelist LIHC-US 0.68 0.57 0 0 0.64 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 2 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 3 99990176 110508418 11 12 54 3 3 3 2 1 0.97 0 11 0 0 11 4 7 13 4 7 33.06 11.23 88.71 0 3 2 Whitelist LIHC-US 1 0 0 0 0.98 0 Low confidence LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC With other complex events 23 0.21 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 4 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 5 NA NA 0 0 54 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.93 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 6 NA NA 0 0 54 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIHC-US NA 0.93 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 7 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 8 48049957 86017573 1 7 54 1 0 1 0 5 0.57 0.01 7 0 0 7 4 4 7 4 4 33.06 96.58 0 0 5 6 Whitelist LIHC-US 0.77 0.03 0 0 0.64 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 9 0.08 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 9 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 10 NA NA 0 0 54 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.13 0 NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 11 61614157 72777118 8 13 54 1 2 3 2 5 0.8 0 12 0 0 12 3 7 15 3 7 33.06 51.14 48.43 2 2 5 Whitelist LIHC-US 0.68 0 0 0 0.84 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 21 0.19 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 12 NA NA 0 0 54 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.91 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 13 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 14 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 15 69675526 70759935 2 4 54 0 1 0 1 2 0.57 0.02 3 0 0 NA NA NA NA NA NA 33.06 100 0 0 3 4 Whitelist LIHC-US 0.54 0.07 0 0 0.64 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 16 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 17 NA NA 0 0 54 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.87 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 18 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 19 NA NA 0 0 54 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.25 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 21 NA NA 0 0 54 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.73 NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::65e430e1-0c9a-4045-83a9-653b7cff811d X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 65e430e1-0c9a-4045-83a9-653b7cff811d LIHC 0.64 2.32 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 LIHC-US DO44877 TCGA-FV-A4ZQ 65e430e1-0c9a-4045-83a9-653b7cff811d male alive C22.0 52 NA 12 NA Included Liver-HCC LIHC US 0 0.39 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 1 156054905 220095092 2 5 89 1 0 0 1 3 0.57 0.69 9 0 0 9 3 5 16 3 5 73.16 91.32 5.71 0 3 4 Whitelist LIHC-US 12 0.68 0.89 0 0 0.64 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 7 0.04 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 2 19444102 169429225 1 5 89 3 2 0 0 0 0.14 1 6 0 0 6 5 6 6 5 6 73.16 97.3 0 0 4 3 Whitelist LIHC-US 0.62 1 0 0 0.59 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 10 0.06 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 3 60797855 188684075 1 2 89 0 1 1 0 0 0.57 0.53 4 0 0 4 3 4 7 3 5 73.16 99.88 0 0 4 5 Whitelist LIHC-US 0.68 0.76 0 0 0.64 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 4 48416152 177056768 2 4 89 3 1 0 0 0 0.11 0.09 13 0 0 13 3 6 15 3 7 73.16 97.39 2.58 0 2 3 Whitelist LIHC-US 0.54 0.25 0 0 0.48 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 8 0.04 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 5 40899212 124664734 8 10 89 3 4 0 1 2 0.17 0 21 0 0 21 4 8 25 4 8 73.16 96.39 0.93 3 4 3 Whitelist LIHC-US 0.68 0 0 0 0.59 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 18 0.1 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 6 NA NA 0 0 89 0 0 0 0 0 NA 0.82 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.96 0.02 NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 7 11033627 78707582 1 4 89 4 0 0 0 0 0.01 1 9 0 0 9 4 5 10 5 6 73.16 99.46 0.34 0 4 5 Whitelist LIHC-US 0.21 1 0 0 0.16 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 8 0.04 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 8 128147597 129430950 1 2 89 0 2 0 0 0 0.11 0.33 4 NA 0 4 3 4 6 3 3 73.16 96.48 0 0 7 6 Whitelist LIHC-US 0.54 0.58 NA 0 0.48 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 9 3799236 31192206 1 5 89 4 0 0 0 1 0.01 0.16 6 0 0 6 6 6 9 6 8 73.16 73.39 26.41 0 3 4 Whitelist LIHC-US 0.45 0.37 0 0 0.16 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 9 0.05 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 10 5021529 77452514 1 3 89 3 0 0 0 0 0.03 1 5 0 0 5 3 3 6 3 4 73.16 27.97 68.45 0 1 2 Whitelist LIHC-US 0.41 1 0 0 0.33 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 6 0.03 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 11 35435174 87913085 1 4 89 0 1 1 1 1 0.8 0.61 9 0 0 9 4 6 12 4 4 73.16 94.66 1.87 0 3 4 Whitelist LIHC-US 0.68 0.82 0 0 0.84 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 7 0.04 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 12 60696002 80286030 1 3 89 2 1 0 0 0 0.3 0.61 4 0 0 4 4 4 6 5 6 73.16 91.81 4.45 0 2 3 Whitelist LIHC-US 0.62 0.83 0 0 0.59 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 6 0.03 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 13 94872215 95168712 2 2 89 1 1 0 0 0 0.57 0.24 3 0 0 NA NA NA 9 4 5 73.16 60.02 25.83 0 4 3 Whitelist LIHC-US 0.68 0.47 0 0 0.64 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 14 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 15 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 16 NA NA 0 0 89 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.91 NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 17 27146083 79827554 1 3 89 1 1 1 0 0 0.8 0.52 6 0 0 6 4 6 8 5 8 73.16 67.86 27.37 0 3 4 Whitelist LIHC-US 0.87 0.76 0 0 0.84 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 6 0.03 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 18 1455207 36938258 1 2 89 0 1 1 0 0 0.57 0.09 2 0 0 NA NA NA 7 4 4 73.16 99.96 0 0 3 4 Whitelist LIHC-US 0.68 0.25 0 0 0.64 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 19 4383176 31964942 1 2 89 1 1 0 0 0 0.57 0.7 3 NA 0 NA NA NA 4 4 4 73.16 34.09 58.63 0 2 3 Whitelist LIHC-US 0.68 0.89 NA 0 0.64 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 4 0.02 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 20 14856301 50460532 1 5 89 3 1 0 0 1 0.11 0 10 0 0 10 4 8 12 4 4 73.16 92.38 0.53 0 4 5 Whitelist LIHC-US 0.62 0 0 0 0.48 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 9 0.05 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 21 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 22 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::670c1cbc-4494-45f1-bb8b-18db82d4f7e0 X NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 LIHC 0.22 3.51 Liver-HCC NA 0 0 NA 3 LIHC-US DO23028 TCGA-CC-A1HT 670c1cbc-4494-45f1-bb8b-18db82d4f7e0 male alive C22.0 50 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 1 161764940 162029309 4 4 231 0 0 2 2 0 0.26 0.07 1 0 0 NA NA NA 26 10 10 10.6 30.81 69.19 0 3 NA Whitelist LIHC-US 0.62 0.2 0 0 0.59 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 2 164918772 192140232 4 4 231 0 1 2 1 0 0.57 0.48 7 0 0 7 7 7 24 23 23 10.6 14.72 85.19 0 2 3 Whitelist LIHC-US 0.68 0.72 0 0 0.64 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 3 101275 159910152 1 15 231 0 10 0 0 5 0 0.44 22 0 0 22 10 22 23 11 11 10.6 2.44 94.52 0 2 3 Whitelist LIHC-US 0.13 0.69 0 0 0 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 25 0.05 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 4 79521516 110101303 3 3 231 2 1 0 0 0 0.3 0.11 3 0 0 NA NA NA 13 9 9 10.6 16.25 83.73 0 2 1 Whitelist LIHC-US 0.62 0.29 0 0 0.59 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 5 21799697 173208906 1 17 231 0 14 0 0 3 0 0.22 25 0 0 25 18 18 28 18 18 10.6 23.03 74.31 0 3 2 Whitelist LIHC-US 17 0 0.45 0 0 0 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 31 0.07 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 6 26485750 163374875 1 7 231 0 7 0 0 0 0 0.07 16 0 0 16 16 16 18 18 18 10.6 1.09 98.78 0 2 3 Whitelist LIHC-US 0.02 0.21 0 0 0.01 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 14 0.03 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 7 146089557 157369494 5 5 231 1 4 0 0 0 0.04 0 2 0 0 NA NA NA 24 16 16 10.6 29.24 70.54 0 2 3 Whitelist LIHC-US 0.45 0.01 0 0 0.36 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 8 12730205 130589835 1 8 231 0 8 0 0 0 0 0.55 12 0 0 12 12 12 13 13 13 10.6 0.83 99.17 0 2 3 Whitelist LIHC-US 0.01 0.77 0 0 0 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 16 0.03 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 9 105144063 105221034 3 5 231 1 1 1 0 2 0.8 0.06 3 0 0 NA NA NA 18 7 15 10.6 5.3 92.18 0 2 3 Whitelist LIHC-US 3 0.93 0.18 0 0 0.84 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 10 26398455 118039623 1 14 231 0 12 0 0 2 0 0.27 21 0 0 21 21 21 21 21 21 10.6 2.09 97.74 0 2 3 Whitelist LIHC-US 17 0 0.51 0 0 0 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 26 0.06 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 11 65967903 66439035 2 2 231 0 2 0 0 0 0.11 0.53 3 0 0 NA NA NA 14 10 10 10.6 0.92 98.65 0 2 3 Whitelist LIHC-US 0.54 0.76 0 0 0.48 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 12 6565847 129085870 1 6 231 0 6 0 0 0 0 0.16 14 0 0 14 14 14 15 15 15 10.6 1.54 98.38 0 2 3 Whitelist LIHC-US 0.04 0.37 0 0 0.03 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 12 0.03 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 13 25894130 109307980 1 6 231 1 5 0 0 0 0.01 1 7 0 0 7 5 7 9 5 5 10.6 0.73 99.16 0 2 3 Whitelist LIHC-US 0.25 1 0 0 0.19 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 12 0.03 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 14 23688975 103234092 1 13 231 1 6 0 1 5 0.01 0.01 14 0 0 14 10 14 15 11 11 10.6 2.98 96.11 1 2 3 Whitelist LIHC-US 19 0.62 0.04 0 0 0.21 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 21 0.05 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 15 78449839 78861354 4 4 231 0 1 1 2 0 0.57 0.43 2 0 0 NA NA NA NA NA NA 10.6 0.4 99.6 0 2 3 Whitelist LIHC-US 0.68 0.67 0 0 0.64 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 16 4188787 64627943 1 2 231 0 2 0 0 0 0.11 0.1 4 NA 0.02 4 4 4 6 6 6 10.6 0.44 99.06 0 2 3 Whitelist LIHC-US 0.54 0.27 NA 0.02 0.48 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 17 8573197 73801521 1 17 231 1 6 0 3 7 0.04 0 20 0 0 20 8 18 20 8 8 10.6 55.57 39.18 0 3 4 Whitelist LIHC-US 10_5 0.68 0 0 0 0.39 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 27 0.06 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 18 26884508 65765172 1 6 231 1 5 0 0 0 0.01 0.68 10 0 0 10 10 10 14 13 13 10.6 6.52 93.44 0 2 3 Whitelist LIHC-US 0.25 0.88 0 0 0.19 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 12 0.03 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 19 40959628 41273785 3 3 231 1 0 1 1 0 0.8 0 4 0 0 4 4 4 19 13 13 10.6 16.43 83.39 0 2 3 Whitelist LIHC-US 0.87 0.01 0 0 0.84 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 20 19810560 46768363 1 5 231 0 4 1 0 0 0.04 0.64 10 0 0 10 10 10 11 11 11 10.6 1.79 97.22 0 2 3 Whitelist LIHC-US 0.45 0.86 0 0 0.36 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 21 NA NA 0 0 231 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 22 28289350 28942990 1 1 231 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 4 4 10.6 25.06 74.94 0 1 2 Whitelist LIHC-US 0.62 0.76 NA NA 0.59 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::68015cc7-d3a1-4c90-b8fb-5d14143d9960 X 74340554 111939403 3 3 231 0 1 1 1 0 0.8 0.55 4 0 0 4 4 4 11 11 11 10.6 0.33 99.14 0 2 3 Whitelist LIHC-US 0.87 0.77 0 0 0.84 0 No LIHC-US 68015cc7-d3a1-4c90-b8fb-5d14143d9960 LIHC 0.83 2.03 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578554_C_A,CN:1 2 LIHC-US DO22836 TCGA-DD-A1EB 68015cc7-d3a1-4c90-b8fb-5d14143d9960 female alive C22.0 72 NA 2017 NA Included Liver-HCC LIHC US 0 66.35 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 1 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 2 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 3 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 4 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 5 2046664 180200470 88 88 102 28 17 22 21 0 0.42 0 50 0 0 50 13 35 51 13 35 24.27 76.57 23.3 6 3 1 Whitelist LIHC-US 0.66 0 0 0 0.63 1 High confidence LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC With other complex events 176 0.86 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 6 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 7 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 8 39517951 62993389 1 1 102 0 0 0 1 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 24.27 99.86 0 0 3 5 Whitelist LIHC-US 0.62 0.74 NA NA 0.59 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 9 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 10 11950267 12061843 1 1 102 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 24.27 0 99.82 0 2 NA Whitelist LIHC-US 0.62 0.59 NA NA 0.59 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 11 7209354 7224465 1 1 102 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 24.27 0.01 99.56 0 1 2 Whitelist LIHC-US 0.62 0.26 NA NA 0.59 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 12 64814899 64851331 1 1 102 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 24.27 0 99.92 0 2 NA Whitelist LIHC-US 0.62 0.26 NA NA 0.59 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 13 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 14 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 15 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 16 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 17 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 18 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 19 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 20 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 21 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf 22 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::69d6881b-9e9a-407b-8b02-bad5fc2455bf X NA NA 0 0 102 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.2 NA NA NA 1 No LIHC-US 69d6881b-9e9a-407b-8b02-bad5fc2455bf LIHC 0.78 2.04 Liver-HCC NA 0 0 NA 2 LIHC-US DO44883 TCGA-DD-A3A8 69d6881b-9e9a-407b-8b02-bad5fc2455bf male deceased C22.0 75 11 NA NA Included Liver-HCC LIHC US 1 0.36 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 1 16944681 155955764 1 9 125 1 1 3 0 4 0.28 0 8 0 0 8 6 7 21 6 8 88.42 100 0 0 3 4 Whitelist LIHC-US 2 0.41 0.01 0 0 0.59 1 Linked to high confidence LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC After polyploidization 14 0.06 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 2 117574279 157367750 27 39 125 7 2 10 8 12 0.16 0 11 0 0 11 7 11 18 9 9 88.42 99.89 0 1 4 5 Whitelist LIHC-US 1_11 0.54 0 0 0 0.59 1 High confidence LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC After polyploidization 66 0.26 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 3 NA NA 0 0 125 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.06 NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 4 13197519 166464059 7 20 125 3 3 0 1 13 0.28 0 4 0 0 4 4 4 4 4 4 88.42 99.86 0 0 3 4 Whitelist LIHC-US 1 1 0 0 0 0.59 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 27 0.11 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 5 NA NA 0 0 125 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.03 NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 6 69289357 77316724 1 1 125 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA 5 3 4 88.42 97.17 0 0 3 NA Whitelist LIHC-US 0.62 0.32 NA NA 0.59 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 7 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 8 50012061 136731010 5 5 125 2 1 1 1 0 0.9 1 9 0 0 9 4 7 11 4 5 88.42 67.14 29.44 0 5 8 Whitelist LIHC-US 0.93 1 0 0 0.92 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 10 0.04 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 9 137129151 137189591 1 1 125 0 1 0 0 0 0.39 0.82 2 0 NA NA NA NA 8 4 5 88.42 99.3 0 0 1 3 Whitelist LIHC-US 0.62 0.96 0 NA 0.59 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 10 112663138 112699656 1 1 125 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 88.42 96.65 0 0 3 NA Whitelist LIHC-US 0.62 0.16 NA NA 0.59 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 11 41208203 71433170 2 16 125 2 1 0 1 12 0.57 0 10 0 0 10 7 9 12 9 11 88.42 99.57 0 0 4 5 Whitelist LIHC-US 1_2 0.68 0 0 0 0.64 1 Linked to high confidence LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC After polyploidization 20 0.08 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 12 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 13 NA NA 0 0 125 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.33 NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 14 NA NA 0 0 125 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.41 NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 15 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 16 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 17 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 18 3145651 3374119 1 1 125 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 88.42 99.96 0 0 4 6 Whitelist LIHC-US 0.62 0.51 NA NA 0.59 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 19 29249525 32826443 4 4 125 0 1 1 2 0 0.57 0 9 0 0 9 3 4 14 6 6 88.42 91.63 0 0 4 5 Whitelist LIHC-US 0.68 0 0 0 0.64 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 20 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 21 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 22 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6c79f64b-63fe-46f5-bf7b-77208231b0f2 X NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 6c79f64b-63fe-46f5-bf7b-77208231b0f2 LIHC 0.48 3.89 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578460_C_A,CN:2 3 LIHC-US DO48518 TCGA-DD-A1EG 6c79f64b-63fe-46f5-bf7b-77208231b0f2 male deceased C22.0 76 1372 NA NA Included Liver-HCC LIHC US 1 45.13 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 1 774798 196124730 35 93 572 6 11 10 8 58 0.64 0 128 0 0 128 11 30 142 11 30 86.22 100 0 21 4 5 Whitelist LIHC-US 10_14_19_2_3_6_7_8 0.62 0 0 0 0.72 1 High confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 128 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 2 64246510 172438746 3 3 572 1 2 0 0 0 0.3 0.94 19 0 0 19 11 19 43 11 43 86.22 99.91 0 0 4 6 Whitelist LIHC-US 0.62 1 0 0 0.59 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 3 170057914 194756879 2 3 572 0 0 1 1 1 0.57 0.01 16 0 0 16 4 11 50 9 22 86.22 84.9 14.61 0 4 6 Whitelist LIHC-US 0.62 0.03 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 5 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 4 66660422 75016903 2 4 572 0 0 1 1 2 0.57 0.45 9 0 0 9 4 5 39 6 8 86.22 99.95 0.04 2 3 6 Whitelist LIHC-US 9 0.68 0.7 0 0 0.64 1 Linked to low confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 5 95188870 133806567 2 7 572 0 1 0 1 5 0.57 0.6 8 0 0 8 8 8 27 11 27 86.22 99.87 0 0 4 5 Whitelist LIHC-US 0.77 0.82 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 9 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 6 1255518 166814606 1 28 572 0 14 1 0 13 0 0.93 34 0 0 34 9 21 39 9 21 86.22 99.86 0 0 4 5 Whitelist LIHC-US 1_2_3_8 0.02 1 0 0 0 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 43 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 7 8218986 100523824 2 12 572 0 0 1 1 10 0.57 0.26 18 0 0 18 7 11 33 13 17 86.22 42.51 57.26 0 4 2 Whitelist LIHC-US 1_10_12_8 0.93 0.51 0 0 0.64 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 14 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 8 8789701 145595244 1 35 572 1 12 1 0 21 0 0.07 37 0 0 37 8 19 38 8 19 86.22 35.45 60.61 9 2 3 Whitelist LIHC-US 1_12_18_19_22_6_7 0.46 0.21 0 0 0 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 49 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 9 71361828 139860149 6 20 572 2 3 0 1 14 0.34 0.03 36 0 0 36 6 6 40 6 6 86.22 99.82 0 0 4 3 Whitelist LIHC-US 14_19 0.86 0.11 0 0 0.59 1 Low confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 26 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 10 35522520 95427339 2 9 572 0 2 1 1 5 0.57 0.42 21 0 0 21 5 10 37 5 17 86.22 99.82 0 0 3 4 Whitelist LIHC-US 12 0.68 0.67 0 0 0.64 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 13 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 11 118695388 119227741 2 4 572 0 0 1 1 2 0.57 0 5 0 0 5 3 3 44 12 34 86.22 99.57 0 0 3 4 Whitelist LIHC-US 2 0.68 0 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 12 1508040 124042273 1 29 572 2 11 0 0 16 0 0.32 25 0 0 25 7 17 26 7 17 86.22 54.72 41.61 0 3 2 Whitelist LIHC-US 10_14_7_8 0.15 0.57 0 0 0 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 42 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 13 46923022 110167406 2 5 572 1 0 0 1 3 0.57 0.08 10 0 0 10 6 10 12 6 6 86.22 83.27 16.73 0 2 1 Whitelist LIHC-US 15 0.68 0.24 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 7 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 14 70988852 75703457 8 19 572 3 1 2 2 11 0.8 0 15 0 0 15 11 14 21 11 11 86.22 99.09 0 0 4 3 Whitelist LIHC-US 18_9 0.93 0.01 0 0 0.84 1 High confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC After polyploidization 27 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 15 40891609 90696431 1 19 572 1 5 0 0 13 0.01 0.12 22 0 0 22 9 9 25 9 9 86.22 100 0 0 5 3 Whitelist LIHC-US 1_13_3_5 0.62 0.31 0 0 0.19 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC With other complex events 25 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 16 611481 58682580 1 7 572 0 4 0 0 3 0.01 0.9 10 0 0 10 3 6 12 3 8 86.22 99.91 0 0 4 3 Whitelist LIHC-US 0.47 1 0 0 0.16 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 11 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 17 64813680 75863767 2 6 572 0 0 1 1 4 0.57 0.02 6 0 0 6 3 5 21 5 5 86.22 80.12 18.8 0 6 7 Whitelist LIHC-US 0.93 0.08 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 18 9039200 46434124 1 4 572 0 4 0 0 0 0.01 0.9 4 0 0 4 4 4 7 5 7 86.22 99.96 0 0 3 4 Whitelist LIHC-US 0.21 1 0 0 0.16 1 Linked to high confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC After polyploidization 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 19 1843528 50016661 1 32 572 1 10 0 0 21 0 0 14 0 0 14 9 11 14 9 11 86.22 99.83 0 0 4 6 Whitelist LIHC-US 1_3_6_7_8_9 0.62 0 0 0 0 1 Linked to low confidence LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC Before polyploidization 43 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 20 14173460 30856489 1 4 572 1 3 0 0 0 0.11 1 2 0 0 NA NA NA 5 3 3 86.22 98.79 0.13 0 2 4 Whitelist LIHC-US 0.54 1 0 0 0.48 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 21 18951161 44600164 1 3 572 1 1 0 0 1 0.57 1 4 0 0 4 3 4 7 3 5 86.22 68.03 0.24 0 4 2 Whitelist LIHC-US 0.87 1 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 5 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 22 30215241 41445689 1 6 572 0 4 0 0 2 0.01 0.12 6 0 0 6 4 6 10 5 7 86.22 99.94 0.06 0 3 5 Whitelist LIHC-US 0.54 0.3 0 0 0.16 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::6dcfc418-ab28-4365-95ea-c1ae254f2341 X 128787386 153664755 1 2 572 0 1 0 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 86.22 99.77 0 0 4 NA Whitelist LIHC-US 0.68 0 0 0 0.64 1 No LIHC-US 6dcfc418-ab28-4365-95ea-c1ae254f2341 LIHC 0.85 3.57 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 LIHC-US DO22896 TCGA-BC-A217 6dcfc418-ab28-4365-95ea-c1ae254f2341 female alive C22.0 75 NA 421 NA Included Liver-HCC LIHC US 0 13.85 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 1 NA NA 0 0 24 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIHC-US NA 0.3 NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 2 111531975 111892556 1 1 24 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 92.4 99.89 0 0 3 5 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 2 0.04 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 6 43583219 43968279 9 9 24 4 3 1 1 0 0.39 0 7 0 0 7 3 5 9 3 3 92.4 99.85 0 0 5 11 Whitelist LIHC-US 0.62 0 0 0 0.59 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 18 0.38 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 8 38450852 39001505 1 2 24 0 0 1 1 0 0.57 0.35 5 NA 0 5 5 5 8 6 6 92.4 70.12 26.45 0 5 2 Whitelist LIHC-US 0.68 0.6 NA 0 0.64 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 4 0.08 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 9 NA NA 0 0 24 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIHC-US NA 0.83 NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 10 NA NA 0 0 24 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.55 NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 11 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 13 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 16 66490981 66955727 1 1 24 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 92.4 99.96 0 0 3 4 Whitelist LIHC-US 0.62 0.33 NA NA 0.59 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 2 0.04 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 17 4944923 37551700 1 2 24 2 0 0 0 0 0.11 0.14 4 NA 0 4 3 4 7 3 3 92.4 85.38 14.6 0 6 2 Whitelist LIHC-US 0.54 0.33 NA 0 0.48 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 4 0.08 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 19 NA NA 0 0 24 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.23 NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::728aedb3-551a-4c16-9be3-7733a9539e9e X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 728aedb3-551a-4c16-9be3-7733a9539e9e LIHC 0.64 4.35 Liver-HCC NA 0 0 NA 4 LIHC-US DO22838 TCGA-ES-A2HS 728aedb3-551a-4c16-9be3-7733a9539e9e male deceased C22.0 80 695 NA NA Included Liver-HCC LIHC US 1 22.86 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 1 NA NA 0 0 9 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LIHC-US NA 0.36 NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 2 139297253 139310732 1 2 9 0 0 0 1 1 0.39 0.17 1 NA NA NA NA NA NA NA NA 13.56 0 99.91 0 2 NA Whitelist LIHC-US 0.68 0.39 NA NA 0.59 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 3 0.17 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 4 4395199 4547011 1 1 9 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 13.56 0.08 99.91 0 1 2 Whitelist LIHC-US 0.62 0.71 NA NA 0.59 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 2 0.11 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 6 74634561 74718270 1 1 9 0 0 0 1 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 13.56 0 99.86 0 2 NA Whitelist LIHC-US 0.62 0.68 NA NA 0.59 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 2 0.11 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 8 NA NA 0 0 9 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.63 NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 14 104236684 104309636 1 1 9 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 4 3 4 13.56 0.07 96.22 0 1 2 Whitelist LIHC-US 0.62 0.49 NA NA 0.59 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 2 0.11 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 16 67197916 67242035 1 1 9 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 13.56 0 99.91 0 2 NA Whitelist LIHC-US 0.62 0.09 NA NA 0.59 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 2 0.11 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::7dd3bda9-3a0a-46fa-b052-a6d24b847804 X NA NA 0 0 9 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.62 NA NA NA 0 No LIHC-US 7dd3bda9-3a0a-46fa-b052-a6d24b847804 LIHC 0.54 2.19 Liver-HCC NA 0 0 NA 2 LIHC-US DO22956 TCGA-ES-A2HT 7dd3bda9-3a0a-46fa-b052-a6d24b847804 male deceased C22.0 54 438 NA NA Included Liver-HCC LIHC US 1 14.41 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 1 159558910 159610254 1 1 65 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA 7 3 3 37.99 90.54 6.44 0 3 4 Whitelist LIHC-US 0.62 0.48 NA NA 0.59 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 2 39561179 158616713 1 2 65 2 0 0 0 0 0.11 0.37 4 0 0 4 4 4 5 5 5 37.99 9.77 90.14 0 1 2 Whitelist LIHC-US 0.54 0.62 0 0 0.48 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 3 333940 69546080 9 26 65 2 1 3 3 17 0.75 0 13 0 0 13 11 11 16 14 14 37.99 11.08 88.87 0 1 2 Whitelist LIHC-US 0.82 0 0 0 0.83 1 High confidence LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC Canonical without polyploidization 35 0.27 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 4 NA NA 0 0 65 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.32 NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 5 112117880 112247398 1 2 65 2 0 0 0 0 0.11 0.6 4 0 0 4 3 4 5 3 3 37.99 0.07 99.78 0 1 0 Whitelist LIHC-US 0.54 0.82 0 0 0.48 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 6 71211803 71233324 1 1 65 1 0 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 37.99 99.86 0 0 1 NA Whitelist LIHC-US 0.62 0.95 NA NA 0.59 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 2 0.02 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 7 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 8 53540543 143877645 1 3 65 2 0 0 0 1 0.11 1 3 NA 0 NA NA NA 4 3 3 37.99 99.86 0 0 0 1 Whitelist LIHC-US 0.41 1 NA 0 0.48 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 5 0.04 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 9 20960396 22821870 7 14 65 3 1 1 2 7 0.67 0 6 0 0 6 3 6 7 4 4 37.99 0.44 99.38 13 1 2 Whitelist LIHC-US 3 0.9 0 0 0 0.74 1 Linked to high confidence LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC With other complex events 21 0.16 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 10 107030364 107335148 2 2 65 0 0 1 1 0 0.57 0.54 1 0 0 NA NA NA 5 3 3 37.99 99.82 0 0 3 NA Whitelist LIHC-US 0.68 0.77 0 0 0.64 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 11 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.62 NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 12 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.63 NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 13 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 14 NA NA 0 0 65 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.02 0 NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 15 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 16 34833461 34866133 1 5 65 1 0 0 0 4 0.39 0.03 1 0 0 NA NA NA NA NA NA 37.99 0 99.9 0 2 NA Whitelist LIHC-US 3 0.93 0.11 0 0 0.59 1 Linked to high confidence LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC With other complex events 6 0.05 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 17 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 18 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 19 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 20 15009165 15824912 1 2 65 2 0 0 0 0 0.11 0.16 4 0 0 4 4 4 5 5 5 37.99 98.3 0.72 0 2 3 Whitelist LIHC-US 0.54 0.37 0 0 0.48 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 21 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de 22 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::89791f8f-dc06-4a04-b166-afbfd6cf53de X NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US 89791f8f-dc06-4a04-b166-afbfd6cf53de LIHC 0.7 2.01 Liver-HCC NA 0 0 NA 2 LIHC-US DO44885 TCGA-DD-A4NG 89791f8f-dc06-4a04-b166-afbfd6cf53de male alive C22.0 77 NA 445 NA Included Liver-HCC LIHC US 0 14.64 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 1 38000564 38315779 2 2 301 0 2 0 0 0 0.11 0 4 0 0 4 3 4 60 11 11 81.98 97.53 2.47 0 4 3 Whitelist LIHC-US 0.54 0.01 0 0 0.48 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 4 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 2 7896145 234951998 1 22 301 2 13 2 0 5 0 0.75 34 0 0 34 10 16 35 11 11 81.98 88.32 11.57 1 4 5 Whitelist LIHC-US 0.04 0.92 0 0 0 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 39 0.06 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 3 129900356 130319509 2 2 301 0 2 0 0 0 0.11 0.91 2 0 0 NA NA NA 27 17 17 81.98 99.86 0 0 3 4 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 4 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 4 85340234 105595840 3 3 301 0 1 1 1 0 0.8 0.91 10 0 0 10 6 10 34 14 14 81.98 72.25 25.17 0 3 4 Whitelist LIHC-US 0.87 1 0 0 0.84 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 6 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 5 147634450 147923158 2 2 301 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 26 7 10 81.98 99.3 0.56 0 3 4 Whitelist LIHC-US 0.68 1 0 0 0.64 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 4 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 6 17536286 142324409 1 19 301 0 15 0 1 3 0 0.63 26 0 0 26 14 23 29 15 24 81.98 94.03 5.79 0 4 5 Whitelist LIHC-US 11 0 0.84 0 0 0 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 35 0.06 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 7 29272457 139818955 1 11 301 0 6 0 2 3 0.01 0.37 20 0 0 20 7 8 21 7 7 81.98 64.05 35.73 0 5 4 Whitelist LIHC-US 0.41 0.62 0 0 0.16 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 19 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 8 793195 126571971 1 8 301 0 7 0 0 1 0 0.11 14 0 0 14 8 14 16 10 16 81.98 99.99 0 0 4 5 Whitelist LIHC-US 0.01 0.29 0 0 0.01 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 15 0.02 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 9 2531011 138963230 1 10 301 0 9 0 0 1 0 0.77 20 0 0 20 8 15 22 9 16 81.98 82.4 17.27 0 5 4 Whitelist LIHC-US 0.01 0.93 0 0 0 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 19 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 10 123803520 124266408 2 2 301 0 0 1 1 0 0.57 0.78 4 0 0 4 4 4 23 9 9 81.98 56.04 40.57 0 1 2 Whitelist LIHC-US 0.68 0.94 0 0 0.64 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 4 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 11 1792398 105876405 1 12 301 0 7 0 0 5 0 0.89 18 0 0 18 8 11 19 9 11 81.98 99.57 0 0 4 3 Whitelist LIHC-US 16_6 0.09 1 0 0 0.01 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 19 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 12 110188187 110521655 2 2 301 0 2 0 0 0 0.11 0.02 3 0 0 NA NA NA 36 8 15 81.98 99.14 0.3 0 3 5 Whitelist LIHC-US 0.54 0.08 0 0 0.48 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 4 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 13 67853828 67922978 3 3 301 1 2 0 0 0 0.3 0.08 3 0 0 NA NA NA 24 5 13 81.98 99.73 0 0 5 4 Whitelist LIHC-US 0.62 0.23 0 0 0.59 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 6 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 14 70040068 105560652 1 8 301 0 5 0 0 3 0 0.87 13 0 0 13 5 7 16 8 8 81.98 99.24 0 0 5 4 Whitelist LIHC-US 0.28 1 0 0 0.07 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 13 0.02 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 15 41329339 78831198 1 5 301 0 5 0 0 0 0 0.86 10 0 0 10 10 10 14 13 13 81.98 23.74 71.38 0 2 3 Whitelist LIHC-US 0.1 0.99 0 0 0.07 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 10 0.02 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 16 7890344 88719886 1 9 301 0 8 0 0 1 0 0.15 18 0 0 18 5 8 20 5 7 81.98 99.96 0 0 4 3 Whitelist LIHC-US 0 0.35 0 0 0 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 17 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 17 10400086 79848943 1 9 301 1 7 0 1 0 0 0.47 16 0 0 16 5 5 17 5 5 81.98 82.76 12.81 0 6 4 Whitelist LIHC-US 0.15 0.72 0 0 0.11 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 18 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 18 4090661 72446475 1 9 301 0 6 1 0 2 0 0.72 4 0 0 4 4 4 7 7 7 81.98 99.96 0 1 3 4 Whitelist LIHC-US 0.41 0.9 0 0 0.09 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 16 0.03 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 19 38719064 58932021 14 16 301 4 4 3 3 2 0.96 0 27 0 0 27 5 14 36 6 6 81.98 92.79 6.7 5 5 6 Whitelist LIHC-US 0.95 0 0 0 0.98 0 Low confidence LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC With other complex events 30 0.05 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 20 32221860 52831670 1 4 301 0 4 0 0 0 0.01 0.69 6 0 0 6 5 6 9 7 9 81.98 99.03 0 0 4 5 Whitelist LIHC-US 0.21 0.89 0 0 0.16 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 8 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 21 16885557 46688650 1 3 301 0 3 0 0 0 0.03 1 8 0 0 8 4 4 9 4 4 81.98 76.92 0.43 1 1 3 Whitelist LIHC-US 0.41 1 0 0 0.33 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 6 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 22 34369085 39438817 1 3 301 0 3 0 0 0 0.03 1 6 0 0 6 6 6 8 8 8 81.98 100 0 0 4 5 Whitelist LIHC-US 0.41 1 0 0 0.33 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 6 0.01 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::8afa3140-dcbd-44c0-ab13-4ada6a0444d4 X 8338971 145015615 1 8 301 1 5 0 0 2 0.01 0.06 5 0 0 5 3 5 6 3 3 81.98 27.65 72.12 0 2 0 Whitelist LIHC-US 0.28 0.19 0 0 0.19 0 No LIHC-US 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 LIHC 0.84 3.54 Liver-HCC NA 14 0.02 frameshift_deletion,17_7579380_-_A,CN:2 4 LIHC-US DO44966 TCGA-FV-A496 8afa3140-dcbd-44c0-ab13-4ada6a0444d4 female alive C22.0 84 NA 10 NA Included Liver-HCC LIHC US 0 0.33 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 1 85562182 234973893 1 3 36 0 3 0 0 0 0.03 0.53 6 0 0 6 3 6 7 3 3 26.28 74.46 25.54 0 2 3 Whitelist LIHC-US 0.41 0.76 0 0 0.33 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 6 0.08 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 2 113013184 113034745 2 2 36 0 1 1 0 0 0.57 1 2 0 0 NA NA NA 4 0 3 26.28 0 99.87 0 1 2 Whitelist LIHC-US 0.68 1 0 0 0.64 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 4 0.06 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 3 104554207 104598734 1 1 36 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 26.28 0.02 99.84 0 1 2 Whitelist LIHC-US 0.62 0.76 NA NA 0.59 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 4 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.76 NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 5 NA NA 0 0 36 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.9 NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 6 NA NA 0 0 36 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.72 NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 7 38372785 38383222 1 1 36 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 26.28 54.42 45.35 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 8 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 11 72788289 93399347 1 2 36 0 2 0 0 0 0.11 0.08 3 0.01 0 NA NA NA NA NA NA 26.28 0.22 99.25 0 2 3 Whitelist LIHC-US 0.54 0.24 0.01 0 0.48 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 4 0.06 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 12 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 13 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 16 NA NA 0 0 36 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.84 NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 17 3760551 12301903 12 12 36 3 1 4 4 0 0.57 0 14 0 0 14 3 8 21 4 11 26.28 25.54 74.45 0 0 1 Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 24 0.33 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 19 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::9a56d8a8-dadd-442e-bc09-732cd619aef7 X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US 9a56d8a8-dadd-442e-bc09-732cd619aef7 LIHC 0.77 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44978 TCGA-G3-A5SL 9a56d8a8-dadd-442e-bc09-732cd619aef7 male alive C22.0 70 NA 243 NA Included Liver-HCC LIHC US 0 7.99 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 1 NA NA 0 0 80 0 0 0 0 0 NA 0.41 NA 0.12 NA NA NA NA 8 3 7 0 0 0 0 0 0 Whitelist LIHC-US NA 0.66 0.12 NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 2 160213354 183188055 3 13 80 1 0 1 1 10 0.8 0 9 0 0 9 4 5 18 5 7 90.3 97.96 1.95 0 2 4 Whitelist LIHC-US 0.54 0 0 0 0.84 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 16 0.1 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 3 3248434 47528756 1 3 80 2 0 1 0 0 0.3 0.66 7 0 0 7 5 7 10 6 6 90.3 99.62 0.34 0 2 3 Whitelist LIHC-US 0.62 0.87 0 0 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 6 0.04 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 4 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 5 64444521 141968386 4 9 80 3 0 0 1 5 0.11 0 13 0 0 13 6 8 16 6 6 90.3 70.1 27.18 0 2 4 Whitelist LIHC-US 11 0.68 0 0 0 0.48 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 13 0.08 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 6 NA NA 0 0 80 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.26 NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 7 8058301 29912403 1 2 80 2 0 0 0 0 0.11 0.8 4 NA 0 4 4 4 6 6 6 90.3 99.78 0 0 3 5 Whitelist LIHC-US 0.54 0.95 NA 0 0.48 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 4 0.02 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 8 43136415 43529751 1 5 80 1 0 0 0 4 0.39 0.07 2 0 0 NA NA NA NA NA NA 90.3 67.14 29.34 0 2 4 Whitelist LIHC-US 0.62 0.2 0 0 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 6 0.04 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 9 21987200 22014126 1 1 80 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 11 3 5 90.3 84.18 15.14 0 3 5 Whitelist LIHC-US 0.62 0.02 0 NA 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 2 0.01 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 10 NA NA 0 0 80 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.52 NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 11 115619936 116141502 1 5 80 1 0 0 0 4 0.39 0.42 4 0 0 4 4 4 5 5 5 90.3 99.2 0.37 0 2 5 Whitelist LIHC-US 5 0.93 0.67 0 0 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 6 0.04 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 12 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 13 46903913 98169047 2 5 80 0 0 2 2 1 0.26 0.02 9 0 0 9 5 6 11 6 6 90.3 100 0 0 1 3 Whitelist LIHC-US 0.68 0.08 0 0 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 9 0.06 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 14 46332145 70367919 1 2 80 1 0 0 0 1 0.39 0.32 2 NA NA NA NA NA NA NA NA 90.3 59.07 40.02 0 2 6 Whitelist LIHC-US 0.68 0.57 NA NA 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 3 0.02 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 15 35257298 100801594 1 2 80 1 0 1 0 0 0.57 0.49 3 0 0 NA NA NA NA NA NA 90.3 99.91 0 0 5 4 Whitelist LIHC-US 0.68 0.73 0 0 0.64 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 4 0.02 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 16 24505438 25776560 4 4 80 0 1 2 1 0 0.57 0.17 5 0 0 5 3 5 5 3 3 90.3 99.57 0 0 4 1 Whitelist LIHC-US 0.68 0.38 0 0 0.64 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 8 0.05 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 17 25347945 25752414 1 1 80 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 90.3 95.57 0 0 4 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 2 0.01 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 18 24446291 39386054 2 2 80 0 0 1 1 0 0.57 0.06 4 0 0 4 4 4 6 6 6 90.3 99.96 0 0 3 5 Whitelist LIHC-US 0.68 0.2 0 0 0.64 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 4 0.02 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 19 NA NA 0 0 80 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 20 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 0 0 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 21 10832975 10865547 1 3 80 1 0 0 0 2 0.39 0.08 3 NA 0 NA NA NA NA NA NA 90.3 70.36 0 0 6 7 Whitelist LIHC-US 0.87 0.22 NA 0 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 4 0.02 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 22 46494517 46599709 1 1 80 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 90.3 100 0 0 5 6 Whitelist LIHC-US 0.62 0.49 NA NA 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 2 0.01 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::a8c2aa08-9156-4845-ad77-5e060858c757 X 103875412 104056418 1 1 80 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 90.3 99.77 0 0 3 4 Whitelist LIHC-US 0.62 0.41 NA NA 0.59 0 No LIHC-US a8c2aa08-9156-4845-ad77-5e060858c757 LIHC 0.75 4.63 Liver-HCC NA 2 0.01 NA 7 LIHC-US DO45009 TCGA-FV-A3I0 a8c2aa08-9156-4845-ad77-5e060858c757 female alive C22.0 76 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 1 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 2 151770564 151793178 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.87 0.01 99.9 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 3 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 5 72851477 72917541 1 1 21 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA 5 3 3 12.87 0.04 99.81 0 2 3 Whitelist LIHC-US 0.62 0.34 0 NA 0.59 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 7 NA NA 0 0 21 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIHC-US NA 0.09 0 NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 8 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 9 NA NA 0 0 21 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.42 NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 10 4633002 79908486 1 3 21 0 2 0 1 0 0.3 0.01 3 0.17 0.02 NA NA NA 4 3 3 12.87 3.6 96.16 0 2 3 Whitelist LIHC-US 0.62 0.06 0.17 0.02 0.59 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 6 0.14 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 13 49005516 49078219 1 3 21 1 0 1 1 0 0.8 0 3 0 0 NA NA NA 5 3 3 12.87 0.49 99.51 0 2 1 Whitelist LIHC-US 0.87 0 0 0 0.84 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 6 0.14 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 17 NA NA 0 0 21 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.69 NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b 22 42617533 43007763 1 1 21 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 12.87 0.76 99.24 0 2 3 Whitelist LIHC-US 0.62 0.45 NA NA 0.59 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 2 0.05 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b7d6621c-8bce-4a01-8588-9d7761d9372b X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US b7d6621c-8bce-4a01-8588-9d7761d9372b LIHC 0.9 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22854 TCGA-EP-A26S b7d6621c-8bce-4a01-8588-9d7761d9372b male alive C22.0 70 NA 111 NA Included Liver-HCC LIHC US 0 3.65 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 1 77623355 98337819 2 4 245 0 1 1 0 2 0.57 0.04 6 0 0 6 5 6 38 5 9 74.24 96.95 0 7 3 6 Whitelist LIHC-US 5 0.68 0.15 0 0 0.64 1 Linked to low confidence LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC After polyploidization 6 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 2 65927784 179199831 1 2 245 1 0 0 1 0 0.57 0 5 0 0 5 3 5 8 6 8 74.24 97.27 0.05 0 4 2 Whitelist LIHC-US 0.68 0 0 0 0.64 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 3 15132141 166034833 1 2 245 2 0 0 0 0 0.11 0 4 NA 0.04 4 3 4 5 3 5 74.24 99.9 0.07 1 4 2 Whitelist LIHC-US 0.54 0 NA 0.04 0.48 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 4 55475268 60743761 3 5 245 2 0 0 1 2 0.3 0.9 7 0 0 7 5 7 13 5 5 74.24 31.39 68.51 0 3 2 Whitelist LIHC-US 1 0.93 1 0 0 0.59 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 8 0.02 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 5 90736 17223234 12 22 245 2 3 3 4 10 0.88 0 21 0 0 21 9 21 27 9 22 74.24 99.84 0 1 5 3 Whitelist LIHC-US 7 0.76 0 0 0 0.91 1 High confidence LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC With other complex events 34 0.07 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 6 6324862 6379727 1 1 245 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 9 3 3 74.24 33.92 63.26 0 8 NA Whitelist LIHC-US 0.62 0 NA NA 0.59 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 2 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 7 29593133 29728789 3 3 245 1 0 1 1 0 0.8 0 4 0 0 4 4 4 20 9 9 74.24 99.76 0 0 4 5 Whitelist LIHC-US 0.87 0.02 0 0 0.84 1 Linked to high confidence LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC After polyploidization 6 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 8 47804145 122986495 27 35 245 10 6 6 5 8 0.53 0 25 0 0 25 4 6 27 4 5 74.24 96.35 0 3 4 1 Whitelist LIHC-US 11 0.75 0 0 0 0.64 1 Low confidence LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC With other complex events 62 0.13 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 9 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 10 86685559 86742941 1 1 245 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 74.24 99.82 0 0 3 4 Whitelist LIHC-US 0.62 0.01 NA NA 0.59 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 2 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 11 49377920 77893092 9 27 245 4 2 2 1 18 0.55 0 42 0 0 42 5 9 45 5 9 74.24 43.47 53.06 1 3 1 Whitelist LIHC-US 1 0.96 0 0 0 0.64 1 Low confidence LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC With other complex events 36 0.07 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 12 NA NA 0 0 245 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIHC-US NA 0.32 0 NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 13 24927431 40822481 4 4 245 2 1 1 0 0 0.57 0 8 0 0 8 4 8 22 5 10 74.24 71.12 28.88 3 3 2 Whitelist LIHC-US 0.68 0.01 0 0 0.64 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 8 0.02 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 14 97863403 98782937 4 4 245 1 1 1 1 0 1 0.85 5 0 0 5 5 5 10 5 5 74.24 4.09 79.99 0 2 1 Whitelist LIHC-US 1 0.99 0 0 1 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 8 0.02 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 15 42203482 84436873 1 2 245 1 1 0 0 0 0.57 0.08 3 NA 0 NA NA NA NA NA NA 74.24 99.67 0.23 0 4 2 Whitelist LIHC-US 0.68 0.22 NA 0 0.64 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 16 2465201 46579637 1 5 245 0 1 0 2 2 0.3 0.11 7 0 0 7 3 4 11 3 4 74.24 65.74 34.15 0 5 4 Whitelist LIHC-US 0.93 0.28 0 0 0.59 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 8 0.02 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 17 31353361 66122826 21 26 245 5 6 6 4 5 0.91 0 35 0 0 35 3 3 39 6 6 74.24 92.41 2.99 0 8 7 Whitelist LIHC-US 7 1 0 0 0 0.94 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 47 0.1 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 18 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 19 NA NA 0 0 245 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIHC-US NA 0.96 NA NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 20 62532175 62704251 2 2 245 1 1 0 0 0 0.57 0.19 3 NA 0 NA NA NA 4 0 3 74.24 99.46 0 0 1 4 Whitelist LIHC-US 0.68 0.41 NA 0 0.64 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 21 38522982 38538921 1 1 245 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 74.24 7.26 70.09 0 2 NA Whitelist LIHC-US 0.62 0.63 NA NA 0.59 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 2 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 22 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::b865dec4-f051-4fbe-9405-f832ff2010d7 X NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US b865dec4-f051-4fbe-9405-f832ff2010d7 LIHC 0.78 3.47 Liver-HCC NA 0 0 NA 4 LIHC-US DO23018 TCGA-G3-A25S b865dec4-f051-4fbe-9405-f832ff2010d7 male alive C22.0 64 NA 37 NA Included Liver-HCC LIHC US 0 1.22 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 1 4234113 243543953 28 42 154 5 10 7 6 14 0.57 0 31 0 0 31 19 31 34 20 20 22.49 26.04 70.66 0 2 4 Whitelist LIHC-US 0.62 0 0 0 0.64 1 High confidence LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC Before polyploidization 70 0.23 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 2 197520743 230931022 1 3 154 1 0 1 0 1 0.57 0.01 4 0 0 4 3 4 6 4 4 22.49 9.65 90.21 0 1 0 Whitelist LIHC-US 0.62 0.03 0 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 5 0.02 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 3 105996524 164643370 5 5 154 2 1 0 2 0 0.53 0.64 5 0 0 5 3 5 7 5 5 22.49 0.55 99.4 0 2 1 Whitelist LIHC-US 0.68 0.85 0 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 10 0.03 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 4 47973014 139227537 1 4 154 4 0 0 0 0 0.01 0.07 10 0 0 10 10 10 13 13 13 22.49 2.18 95.16 0 1 2 Whitelist LIHC-US 0.21 0.22 0 0 0.16 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 8 0.03 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 5 8150651 29563601 1 3 154 1 0 1 1 0 0.8 0.32 4 0 0 4 3 4 6 4 4 22.49 23.45 76.41 0 3 2 Whitelist LIHC-US 0.87 0.57 0 0 0.84 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 6 0.02 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 6 130131489 154786294 2 2 154 0 0 1 1 0 0.57 0.39 1 0 0 NA NA NA 14 4 6 22.49 33.8 63.38 0 2 NA Whitelist LIHC-US 0.68 0.64 0 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 7 69815695 70202095 1 1 154 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 22.49 0.24 99.53 0 1 2 Whitelist LIHC-US 0.62 0.02 NA NA 0.59 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 8 36114793 133217040 1 25 154 4 2 0 0 19 0.06 0 19 0 0 19 11 19 20 12 12 22.49 31.9 67.99 0 2 1 Whitelist LIHC-US 4 0.68 0 0 0 0.48 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 31 0.1 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 9 104785881 105508260 1 1 154 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 22.49 35.25 64.63 0 0 1 Whitelist LIHC-US 0.62 0.33 NA NA 0.59 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 10 86360165 101222789 2 9 154 1 0 0 1 7 0.57 0.12 4 0 0 4 4 4 4 4 4 22.49 34.01 65.82 0 1 2 Whitelist LIHC-US 8 0.62 0.31 0 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 11 0.04 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 11 24633590 85181862 1 8 154 2 1 1 1 3 0.9 0 2 0 0 NA NA NA 8 8 8 22.49 99.57 0 0 1 3 Whitelist LIHC-US 1 0.87 0 0 0 0.92 1 Linked to high confidence LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC With other complex events 13 0.04 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 12 76195932 124884638 1 2 154 2 0 0 0 0 0.11 0.05 3 NA 0 NA NA NA NA NA NA 22.49 0.04 99.88 0 2 1 Whitelist LIHC-US 0.54 0.17 NA 0 0.48 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 13 35046094 36392953 1 2 154 0 0 0 1 1 0.39 0.02 1 0 NA NA NA NA 5 5 5 22.49 38.02 61.98 0 2 NA Whitelist LIHC-US 8 0.68 0.09 0 NA 0.59 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 3 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 14 NA NA 0 0 154 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.49 NA NA NA 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 15 NA NA 0 0 154 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.7 NA NA NA 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 16 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 17 62519171 64203573 1 1 154 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 22.49 2.07 97.92 0 2 3 Whitelist LIHC-US 0.62 0.7 NA NA 0.59 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 18 48240904 51455627 2 2 154 0 0 1 1 0 0.57 1 4 0.03 0 4 4 4 12 8 8 22.49 80.51 14.85 0 0 1 Whitelist LIHC-US 0.68 1 0.03 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 19 15522386 15670198 1 1 154 0 0 1 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 22.49 0.25 99.58 0 2 3 Whitelist LIHC-US 0.62 0.93 NA NA 0.59 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 20 17578358 25623495 1 2 154 1 0 0 1 0 0.57 0.05 3 0 0 NA NA NA 6 6 6 22.49 31.53 61.34 0 2 1 Whitelist LIHC-US 0.68 0.16 0 0 0.64 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 21 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 22 NA NA 0 0 154 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bce25281-502e-4599-9679-32dc8462ffb1 X 87865169 141589887 1 5 154 4 0 0 1 0 0.04 0.36 9 0 0 9 9 9 9 9 9 22.49 0.95 99.05 0 2 1 Whitelist LIHC-US 0.45 0.61 0 0 0.36 1 No LIHC-US bce25281-502e-4599-9679-32dc8462ffb1 LIHC 0.89 1.98 Liver-HCC NA 10 0.03 NA 2 LIHC-US DO44889 TCGA-DD-A4NE bce25281-502e-4599-9679-32dc8462ffb1 female deceased C22.0 75 660 NA NA Included Liver-HCC LIHC US 1 21.71 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 1 196172573 224172998 2 23 394 2 0 1 1 19 0.57 0 9 0 0 9 8 9 47 12 14 18.55 45.09 54.91 0 3 4 Whitelist LIHC-US 15 0.62 0 0 0 0.64 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 27 0.03 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 2 55628458 55771082 4 4 394 1 1 2 0 0 0.57 0 1 0 0 NA NA NA 44 8 8 18.55 1.62 98.28 0 2 NA Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 8 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 3 171584554 171768171 2 10 394 0 2 0 0 8 0.11 0 3 0 0 NA NA NA 30 10 10 18.55 0.97 98.99 0 3 4 Whitelist LIHC-US 0.62 0.02 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 12 0.02 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 4 3448681 185764637 1 16 394 2 10 0 0 4 0 0.07 11 0 0 11 4 7 13 6 9 18.55 12.21 87.77 0 2 3 Whitelist LIHC-US 0.06 0.2 0 0 0.01 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 28 0.04 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 5 133197757 133518821 3 3 394 0 3 0 0 0 0.03 0.14 3 0 0 NA NA NA 19 15 15 18.55 99.52 0.35 0 3 4 Whitelist LIHC-US 0.41 0.34 0 0 0.33 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 6 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 6 36666868 36712601 3 8 394 1 0 0 2 5 0.3 0.06 3 0 0 NA NA NA 19 19 19 18.55 0.44 99.42 0 3 2 Whitelist LIHC-US 1 0.62 0.18 0 0 0.59 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 11 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 7 17035548 150946760 1 13 394 0 5 0 0 8 0 0.43 9 0 0 9 9 9 9 9 9 18.55 0.23 99.54 0 2 3 Whitelist LIHC-US 19 0.54 0.68 0 0 0.07 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 18 0.02 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 8 39979014 43507579 2 2 394 0 0 0 2 0 0.11 0.21 3 0 0 NA NA NA 12 10 10 18.55 28.46 67.97 1 2 1 Whitelist LIHC-US 0.54 0.43 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 9 139507776 139569612 2 2 394 0 2 0 0 0 0.11 0.04 2 0 0 NA NA NA 15 13 13 18.55 0.55 98.75 0 2 3 Whitelist LIHC-US 0.54 0.13 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 10 33860375 60837181 2 2 394 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 15 8 8 18.55 1.41 98.41 0 2 3 Whitelist LIHC-US 0.68 0.06 0 0 0.64 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 11 9472162 120094426 1 16 394 2 9 1 0 4 0 0.72 22 0 0 22 14 22 23 15 15 18.55 1.33 98.24 0 2 3 Whitelist LIHC-US 15 0.46 0.9 0 0 0.05 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 28 0.04 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 12 121717954 122323556 2 2 394 0 2 0 0 0 0.11 0.07 2 0 0 NA NA NA 16 10 10 18.55 1.09 98.33 0 2 3 Whitelist LIHC-US 0.54 0.22 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 13 48878649 49156494 2 2 394 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA NA NA NA 18.55 51.59 48.41 0 1 NA Whitelist LIHC-US 0.54 0.05 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 14 68957152 69148254 2 7 394 0 0 2 0 5 0.11 0.11 1 0 0 NA NA NA 8 3 3 18.55 34.85 64.23 0 2 NA Whitelist LIHC-US 0.62 0.29 0 0 0.48 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 9 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 15 41394681 90065593 1 32 394 3 10 0 0 19 0 0 15 0 0 15 11 15 17 13 13 18.55 0.56 99.44 0 2 3 Whitelist LIHC-US 1 0.21 0 0 0 0.01 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 45 0.06 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 16 14363121 87836028 1 18 394 1 5 0 0 12 0.01 0 14 0 0 14 5 14 16 5 5 18.55 42.7 57.21 0 2 3 Whitelist LIHC-US 1 0.54 0.01 0 0 0.19 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 24 0.03 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 17 19411953 60251241 2 10 394 1 2 0 1 6 0.57 0.03 11 0 0 11 5 10 16 5 5 18.55 74.25 25.74 0 3 4 Whitelist LIHC-US 20 0.68 0.11 0 0 0.64 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 14 0.02 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 18 19525091 47381514 1 4 394 0 4 0 0 0 0.01 0.21 5 0 0 5 5 5 7 7 7 18.55 0.08 99.89 0 2 3 Whitelist LIHC-US 0.21 0.44 0 0 0.16 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 8 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 19 1107402 33842753 1 9 394 1 2 0 0 6 0.3 0.59 5 0.01 0 5 5 5 5 5 5 18.55 0.36 99.46 0 2 3 Whitelist LIHC-US 7 0.85 0.81 0.01 0 0.59 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 12 0.02 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 20 43059883 49126739 1 18 394 0 4 0 0 14 0.01 0 14 0 0 14 5 6 19 7 7 18.55 10.23 88.8 0 2 3 Whitelist LIHC-US 17 0.99 0 0 0 0.16 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 22 0.03 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 21 37348146 37511878 2 2 394 1 1 0 0 0 0.57 0.01 2 0 0 NA NA NA 7 3 3 18.55 0.64 76.71 0 1 2 Whitelist LIHC-US 0.68 0.05 0 0 0.64 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 4 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd 22 17705223 32318737 1 3 394 1 2 0 0 0 0.3 0.15 3 0 0 NA NA NA 5 3 3 18.55 16.17 83.83 0 2 1 Whitelist LIHC-US 0.62 0.36 0 0 0.59 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 6 0.01 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd X 7609916 122892855 1 6 394 2 3 0 1 0 0.34 0 3 0 0 NA NA NA NA NA NA 18.55 0.05 99.72 0 2 3 Whitelist LIHC-US 0.62 0 0 0 0.59 0 No LIHC-US bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd LIHC 0.57 2.05 Liver-HCC NA 12 0.02 NA 2 LIHC-US DO44890 TCGA-FV-A495 bd48fa5e-0152-46f0-a4fa-8cf723ff2dcd female alive C22.0 51 NA 1 NA Included Liver-HCC LIHC US 0 0.03 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 1 237469669 241858139 4 4 164 0 0 2 2 0 0.26 0.89 6 0 0 6 3 6 18 10 14 78.18 91.72 8.28 0 6 4 Whitelist LIHC-US 0.62 1 0 0 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 8 0.02 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 2 13930831 198751626 1 7 164 1 4 0 0 2 0.04 0.12 10 0 0 10 6 10 11 6 6 78.18 95.97 3.94 0 4 5 Whitelist LIHC-US 0.62 0.31 0 0 0.36 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 12 0.04 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 3 71066538 71373663 2 2 164 0 0 1 1 0 0.57 0.54 4 0 0 4 4 4 14 5 7 78.18 54.17 42.66 0 0 2 Whitelist LIHC-US 0.68 0.77 0 0 0.64 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 4 127387464 128395842 2 2 164 0 2 0 0 0 0.11 1 2 0 0 NA NA NA 14 5 8 78.18 99.9 0.1 0 4 6 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 5 675045 165424040 1 8 164 1 6 0 1 0 0.01 0.87 13 0 0 13 11 13 13 11 11 78.18 95.86 4.02 0 4 6 Whitelist LIHC-US 0.28 1 0 0 0.21 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 16 0.05 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 6 67400412 68494501 4 9 164 0 2 0 2 5 0.26 0 3 0 0 NA NA NA 28 7 14 78.18 35.47 61.27 0 2 3 Whitelist LIHC-US 10 0.41 0 0 0 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 13 0.04 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 7 151985096 152267310 2 2 164 0 0 1 1 0 0.57 0.39 2 0 0 NA NA NA 11 7 11 78.18 99.76 0 0 5 8 Whitelist LIHC-US 0.68 0.64 0 0 0.64 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 8 27489080 131425295 1 3 164 0 3 0 0 0 0.03 0.59 4 0 0 4 4 4 5 5 5 78.18 0.24 99.65 0 2 4 Whitelist LIHC-US 0.41 0.81 0 0 0.33 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 6 0.02 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 9 6863035 139150130 1 10 164 4 6 0 0 0 0.01 0.07 15 0 0 15 5 10 16 5 5 78.18 99.33 0 0 3 4 Whitelist LIHC-US 0.3 0.21 0 0 0.23 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 20 0.06 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 10 661344 124955305 1 8 164 0 5 0 0 3 0 0.85 7 0 0 7 4 6 8 5 7 78.18 99.83 0 0 4 6 Whitelist LIHC-US 0.06 0.99 0 0 0.07 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 13 0.04 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 11 38687554 62335883 1 3 164 0 3 0 0 0 0.03 0.26 5 0 0 5 3 5 5 3 3 78.18 99.57 0 0 4 6 Whitelist LIHC-US 0.41 0.5 0 0 0.33 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 6 0.02 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 12 33073650 34313297 5 5 164 2 1 0 2 0 0.53 0.03 3 0 0 NA NA NA 14 6 8 78.18 73.62 22.7 0 4 2 Whitelist LIHC-US 0.68 0.1 0 0 0.64 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 10 0.03 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 13 37643458 81658500 1 3 164 1 1 0 0 1 0.57 0.67 5 0 0 5 3 5 5 3 3 78.18 7.51 92.49 0 2 1 Whitelist LIHC-US 0.62 0.87 0 0 0.64 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 5 0.02 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 14 31207833 45430488 1 2 164 0 2 0 0 0 0.11 0.5 4 0 0 4 3 4 5 3 5 78.18 99.09 0 0 4 5 Whitelist LIHC-US 0.54 0.74 0 0 0.48 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 15 40814689 100159125 1 5 164 1 4 0 0 0 0.04 0.47 10 0 0 10 6 8 11 7 9 78.18 99.69 0.15 0 3 4 Whitelist LIHC-US 0.45 0.71 0 0 0.36 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 10 0.03 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 16 48845748 49091817 1 1 164 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 5 5 78.18 99.71 0.28 0 2 4 Whitelist LIHC-US 0.62 0.59 NA NA 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 17 1472744 66038082 1 6 164 2 2 0 0 2 0.26 0.09 7 0 0 7 3 7 8 4 4 78.18 70.3 24.42 0 4 2 Whitelist LIHC-US 0.62 0.25 0 0 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 10 0.03 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 18 71481645 71544279 1 1 164 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 78.18 99.96 0 0 4 NA Whitelist LIHC-US 0.62 0.33 NA NA 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 19 39326627 39469993 2 2 164 0 2 0 0 0 0.11 0.26 4 0 0 4 0 3 9 5 6 78.18 92.01 0 0 4 5 Whitelist LIHC-US 0.54 0.5 0 0 0.48 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 20 5153380 39169153 1 5 164 0 5 0 0 0 0 0.41 6 0 0 6 4 6 7 5 7 78.18 92.11 0 0 4 6 Whitelist LIHC-US 0.1 0.66 0 0 0.07 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 10 0.03 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 21 19240016 19277210 1 1 164 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 78.18 77.35 0 0 4 5 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef 22 18305900 20773820 1 2 164 0 2 0 0 0 0.11 0 4 0 0 4 3 4 8 4 5 78.18 86.21 13.79 0 4 5 Whitelist LIHC-US 0.54 0.02 0 0 0.48 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bee9d6c8-948f-4b76-97ca-b985064249ef X 18412365 18472180 2 2 164 0 0 1 1 0 0.57 0.29 2 0 0 NA NA NA 13 3 5 78.18 99.45 0.32 0 4 6 Whitelist LIHC-US 0.68 0.53 0 0 0.64 0 No LIHC-US bee9d6c8-948f-4b76-97ca-b985064249ef LIHC 0.62 3.66 Liver-HCC NA 4 0.01 NA 4 LIHC-US DO44930 TCGA-DD-A4NA bee9d6c8-948f-4b76-97ca-b985064249ef female alive C22.0 67 NA 1008 NA Included Liver-HCC LIHC US 0 33.16 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 1 244939651 244952687 1 1 96 1 0 0 0 0 0.39 0.34 2 0 NA NA NA NA 4 4 4 19.25 42.23 57.76 0 2 3 Whitelist LIHC-US 0.62 0.59 0 NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 2 97744377 180446202 6 14 96 0 1 4 1 8 0.11 0 18 0 0 18 9 9 20 11 11 19.25 1.28 98.59 0 2 0 Whitelist LIHC-US 7 0.62 0 0 0 0.48 1 High confidence LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC With other complex events 20 0.1 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 3 28157381 28297137 1 1 96 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 19.25 0.07 99.9 0 1 2 Whitelist LIHC-US 0.62 0.2 NA NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 4 24349333 63715857 4 8 96 0 3 1 0 4 0.11 0.01 3 0 0 NA NA NA 5 3 3 19.25 0.32 99.65 1 2 3 Whitelist LIHC-US 7 0.41 0.06 0 0 0.48 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 12 0.06 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 5 85481430 85740207 1 1 96 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 19.25 0 99.87 0 2 NA Whitelist LIHC-US 0.62 0.12 NA NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 6 148291755 163077401 1 2 96 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 19.25 0.06 99.79 0 1 2 Whitelist LIHC-US 0.54 0.32 NA 0 0.48 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 7 57254259 125189468 5 19 96 3 0 1 1 14 0.28 0 13 0 0 13 5 10 25 7 13 19.25 75.58 21.62 1 2 3 Whitelist LIHC-US 2 0.54 0 0 0 0.59 1 Linked to high confidence LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC With other complex events 24 0.12 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 8 50709913 95516047 3 3 96 1 1 0 1 0 0.8 0.16 5 0 0 5 3 5 17 7 9 19.25 91.02 8.85 0 2 3 Whitelist LIHC-US 0.87 0.36 0 0 0.84 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 6 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 9 20557383 23963573 2 2 96 0 0 1 1 0 0.57 0.59 3 NA 0 NA NA NA NA NA NA 19.25 99.28 0 0 1 0 Whitelist LIHC-US 0.68 0.81 NA 0 0.64 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 10 63040032 63099619 1 1 96 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 19.25 0.04 99.77 0 1 2 Whitelist LIHC-US 0.62 1 0 NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 11 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 12 NA NA 0 0 96 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.84 NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 13 19960556 75661349 1 1 96 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 19.25 48.37 51.63 0 1 2 Whitelist LIHC-US 0.62 0.93 NA NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 14 26126326 103854488 1 7 96 0 0 0 1 6 0.39 0.01 4 0 0 4 4 4 5 5 5 19.25 0.07 99.01 0 1 2 Whitelist LIHC-US 0.77 0.05 0 0 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 8 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 16 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 17 10414881 42851635 1 4 96 2 0 0 1 1 0.3 0.33 7 0 0 7 7 7 9 9 9 19.25 20.01 75.56 0 2 1 Whitelist LIHC-US 0.68 0.59 0 0 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 7 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 18 28758317 28772577 1 2 96 0 0 0 1 1 0.39 0.33 2 NA NA NA NA NA NA NA NA 19.25 6.06 93.91 0 1 2 Whitelist LIHC-US 0.68 0.58 NA NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 3 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 19 NA NA 0 0 96 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.69 NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 20 14591462 14624093 1 1 96 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.25 0 99.01 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::bfd20d71-18a5-4f01-8d56-84378ad92359 X NA NA 0 0 96 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.26 NA NA NA 1 No LIHC-US bfd20d71-18a5-4f01-8d56-84378ad92359 LIHC 0.68 1.98 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIHC-US DO22914 TCGA-FV-A3I1 bfd20d71-18a5-4f01-8d56-84378ad92359 female alive C22.0 81 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 1 47586129 48017385 4 4 49 0 1 2 1 0 0.57 0.28 4 0 0 4 3 4 9 3 3 38.48 0.22 99.78 0 3 2 Whitelist LIHC-US 0.68 0.52 0 0 0.64 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 8 0.08 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 2 223172851 224827295 1 1 49 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 38.48 0.68 99.22 0 1 2 Whitelist LIHC-US 0.62 0.68 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 3 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 4 53195439 134874508 1 1 49 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 38.48 42.73 54.63 0 1 2 Whitelist LIHC-US 0.62 0.5 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 5 NA NA 0 0 49 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.93 NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 6 54992535 55010322 1 1 49 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 38.48 0.01 99.85 0 1 2 Whitelist LIHC-US 0.62 0.62 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 7 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 8 39018104 40499926 1 4 49 1 0 0 0 3 0.39 0 4 0 0 4 0 3 11 3 4 38.48 99.99 0 0 3 6 Whitelist LIHC-US 11 0.68 0.02 0 0 0.59 0 Linked to low confidence LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC With other complex events 5 0.05 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 9 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 10 31824938 31841650 1 1 49 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 38.48 0 99.82 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 11 56563250 70581761 11 19 49 1 3 4 3 8 0.63 0 23 0 0 23 6 6 30 6 6 38.48 96.36 0 0 21 23 Whitelist LIHC-US 0.81 0 0 0 0.71 0 Low confidence LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC With other complex events 30 0.31 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 12 24102689 28933350 1 3 49 0 1 1 0 1 0.57 0.29 4 0 0 4 0 3 4 0 0 38.48 78.97 20.95 0 2 3 Whitelist LIHC-US 0.62 0.54 0 0 0.64 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 5 0.05 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 13 86476651 86495711 1 1 49 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 38.48 0.02 99.98 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 14 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 15 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 16 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 17 73389913 73421639 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.48 0 99.98 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 18 76341116 77600187 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.48 1.61 97.74 0 1 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 19 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 20 NA NA 0 0 49 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.53 NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 21 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 22 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 0 0 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c0bf9278-9cbb-4361-b4d8-ab172b67e276 X 76085059 76192137 1 1 49 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 38.48 0.07 99.7 0 1 2 Whitelist LIHC-US 0.62 0.76 NA NA 0.59 0 No LIHC-US c0bf9278-9cbb-4361-b4d8-ab172b67e276 LIHC 0.4 2.18 Liver-HCC NA 2 0.02 NA 3 LIHC-US DO44986 TCGA-DD-A4ND c0bf9278-9cbb-4361-b4d8-ab172b67e276 female alive C22.0 56 NA 2141 NA Included Liver-HCC LIHC US 0 70.43 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 1 61551847 247236559 1 3 75 2 0 0 0 1 0.11 0.28 4 NA 0 4 4 4 4 4 4 10.67 45.52 51.51 0 2 3 Whitelist LIHC-US 0.62 0.53 NA 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 5 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 2 115145407 206223363 1 4 75 4 0 0 0 0 0.01 1 2 0 0 NA NA NA NA NA NA 10.67 0.14 99.77 0 1 2 Whitelist LIHC-US 0.21 1 0 0 0.16 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 8 0.05 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 3 17621629 171986122 1 6 75 6 0 0 0 0 0 0.25 12 0 0 12 7 12 13 7 7 10.67 7.99 91.85 0 2 1 Whitelist LIHC-US 0.04 0.49 0 0 0.03 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 12 0.08 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 4 3177184 151320712 1 3 75 3 0 0 0 0 0.03 0.82 3 0 0 NA NA NA NA NA NA 10.67 0.05 99.93 0 2 1 Whitelist LIHC-US 0.41 0.96 0 0 0.33 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 6 0.04 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 5 9173803 174106424 1 6 75 5 1 0 0 0 0.01 0.05 6 0 0 6 6 6 7 7 7 10.67 0.44 99.43 0 1 2 Whitelist LIHC-US 0.25 0.17 0 0 0.19 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 12 0.08 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 6 115884451 116699525 1 2 75 2 0 0 0 0 0.11 0.63 1 0 0 NA NA NA NA NA NA 10.67 0 99.85 0 2 NA Whitelist LIHC-US 0.54 0.84 0 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 7 27986875 149528460 1 5 75 5 0 0 0 0 0 0.3 5 0 0 5 5 5 6 5 5 10.67 5.05 94.72 0 2 1 Whitelist LIHC-US 0.1 0.55 0 0 0.07 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 10 0.07 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 8 90814741 121849767 1 2 75 0 2 0 0 0 0.11 0.59 2 NA 0 NA NA NA 5 3 3 10.67 7.65 92.35 0 2 3 Whitelist LIHC-US 0.54 0.81 NA 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 9 88166024 88341473 1 1 75 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.67 0 96.89 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 10 74554873 74585670 1 1 75 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 10.67 0 99.82 0 2 NA Whitelist LIHC-US 0.62 0.81 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 11 111524522 111642840 2 2 75 0 0 1 1 0 0.57 0.78 1 0 0 NA NA NA 4 4 4 10.67 2.67 96.9 0 2 NA Whitelist LIHC-US 0.68 0.94 0 0 0.64 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 12 48614027 48701199 1 1 75 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 10.67 1.13 98.79 0 2 NA Whitelist LIHC-US 0.62 0.81 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 13 19795542 94605212 1 3 75 3 0 0 0 0 0.03 0.75 2 0.07 0 NA NA NA NA NA NA 10.67 3.63 82.22 0 1 2 Whitelist LIHC-US 0.41 0.91 0.07 0 0.33 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 6 0.04 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 14 102339934 102359523 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 10.67 0.02 84.06 0 1 2 Whitelist LIHC-US 0.62 0.91 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 15 47712913 98537714 1 2 75 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 10.67 1.86 82.73 0 1 2 Whitelist LIHC-US 0.54 1 NA 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 16 72560278 78735163 1 2 75 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 10.67 0.18 99.73 0 1 2 Whitelist LIHC-US 0.54 1 NA 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 17 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 0 0 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 18 8030911 31223384 1 2 75 1 0 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 10.67 0 99.96 0 2 NA Whitelist LIHC-US 0.68 1 NA 0 0.64 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 19 14942301 55614343 1 1 75 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.67 30.75 68.79 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 20 14316433 62566220 1 4 75 4 0 0 0 0 0.01 0.02 2 0 0 NA NA NA NA NA NA 10.67 0.05 99.19 0 1 2 Whitelist LIHC-US 0.21 0.09 0 0 0.16 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 8 0.05 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 21 39820365 39876875 1 1 75 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 10.67 0.12 77.24 0 2 3 Whitelist LIHC-US 0.62 0.82 NA NA 0.59 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 22 24843824 40753849 1 3 75 3 0 0 0 0 0.03 0.06 1 0 0 NA NA NA NA NA NA 10.67 0 76.22 0 2 NA Whitelist LIHC-US 0.41 0.19 0 0 0.33 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 6 0.04 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c52abac9-07da-4b3d-bf8a-2161cacf9682 X 13735065 132777862 1 2 75 2 0 0 0 0 0.11 0.79 2 0 0 NA NA NA NA NA NA 10.67 100 0 0 0 1 Whitelist LIHC-US 0.54 0.94 0 0 0.48 0 No LIHC-US c52abac9-07da-4b3d-bf8a-2161cacf9682 LIHC 0.28 1.96 Liver-HCC NA 4 0.03 NA 2 LIHC-US DO48505 TCGA-ED-A4XI c52abac9-07da-4b3d-bf8a-2161cacf9682 male alive C22.0 58 NA 6 NA Included Liver-HCC LIHC US 0 0.2 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 1 NA NA 0 0 12 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.19 NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 3 NA NA 0 0 12 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.8 NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 4 166079020 166330981 1 1 12 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 54.66 0.13 99.66 0 2 3 Whitelist LIHC-US 0.62 0.41 NA NA 0.59 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 2 0.08 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 5 89996451 178824546 1 2 12 1 1 0 0 0 0.57 0.04 4 NA 0 4 3 4 7 3 5 54.66 99.75 0.11 1 3 2 Whitelist LIHC-US 0.68 0.13 NA 0 0.64 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 4 0.17 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 8 114325451 115075511 1 1 12 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 54.66 99.99 0 0 3 4 Whitelist LIHC-US 0.62 0.71 NA NA 0.59 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 2 0.08 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 9 NA NA 0 0 12 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.22 NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 11 62309854 62320790 1 1 12 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 54.66 99.44 0.12 0 4 NA Whitelist LIHC-US 0.62 0.68 NA NA 0.59 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 2 0.08 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 18 7648049 7740564 1 1 12 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 54.66 0.12 99.85 0 1 2 Whitelist LIHC-US 0.62 0.52 NA NA 0.59 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 2 0.08 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 19 NA NA 0 0 12 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.44 NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c7f1b389-aec7-4993-8afb-b7a56064f8fc X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c7f1b389-aec7-4993-8afb-b7a56064f8fc LIHC 0.52 2.56 Liver-HCC NA 0 0 stopgain,17_7578275_A_G,CN:1 3 LIHC-US DO49659 TCGA-BW-A5NQ c7f1b389-aec7-4993-8afb-b7a56064f8fc male alive C22.0 63 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 1 67027705 188633650 1 2 81 0 0 0 1 1 0.39 0.09 4 NA NA 4 4 4 5 4 4 18.54 60.45 39.55 0 2 3 Whitelist LIHC-US 0.68 0.26 NA NA 0.59 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 3 0.02 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 2 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 3 56941629 56973678 1 1 81 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 18.54 0.02 99.86 0 2 3 Whitelist LIHC-US 0.62 0.32 NA NA 0.59 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 4 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 5 133309473 133420681 1 1 81 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA 4 4 4 18.54 4.55 95.3 0 2 3 Whitelist LIHC-US 0.62 0.49 NA NA 0.59 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 6 41892254 58688812 6 18 81 1 1 1 3 12 0.57 0 18 0 0 18 6 12 20 6 6 18.54 71.63 28.22 1 1 2 Whitelist LIHC-US 0.62 0 0 0 0.64 0 Low confidence LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC With other complex events 24 0.15 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 7 146329868 146382431 1 15 81 1 1 1 0 12 0.8 0 2 0 0 NA NA NA NA NA NA 18.54 8.01 91.93 0 1 3 Whitelist LIHC-US 6 0.73 0 0 0 0.84 0 Linked to low confidence LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC With other complex events 18 0.11 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 8 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 9 7724625 24082270 1 2 81 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 18.54 1.94 97.88 0 1 2 Whitelist LIHC-US 0.54 0.93 NA 0 0.48 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 10 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 11 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 12 NA NA 0 0 81 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.41 NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 13 88994634 89084284 2 16 81 0 2 0 0 14 0.11 0 3 0 0 NA NA NA 9 3 5 18.54 22.9 77.1 0 1 3 Whitelist LIHC-US 6 0.87 0 0 0 0.48 0 Linked to low confidence LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC With other complex events 18 0.11 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 14 22423593 60185444 4 4 81 1 1 1 1 0 1 0.33 4 0 0 4 4 4 5 5 5 18.54 0.08 99.01 0 1 2 Whitelist LIHC-US 1 0.58 0 0 1 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 8 0.05 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 15 NA NA 0 0 81 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.04 0 NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 16 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 17 60236970 70832755 3 14 81 1 0 0 2 11 0.3 0 4 0 0 4 0 3 13 7 8 18.54 39.18 55.37 0 4 2 Whitelist LIHC-US 6 0.62 0 0 0 0.59 0 Linked to low confidence LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC With other complex events 17 0.1 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 18 60900835 61061898 1 1 81 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 18.54 0.21 99.78 0 1 2 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 19 NA NA 0 0 81 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.88 NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 20 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 21 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 22 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::c95ed407-bcc2-44aa-bc59-bf7549f2d665 X NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US c95ed407-bcc2-44aa-bc59-bf7549f2d665 LIHC 0.82 1.97 Liver-HCC NA 0 0 NA 2 LIHC-US DO44872 TCGA-FV-A23B c95ed407-bcc2-44aa-bc59-bf7549f2d665 female alive C22.0 70 NA 987 NA Included Liver-HCC LIHC US 0 32.47 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 1 150966760 171756815 2 4 125 1 0 0 1 2 0.57 0.41 5 0 0 5 5 5 10 9 9 20.06 14.45 85.55 0 3 2 Whitelist LIHC-US 0.68 0.66 0 0 0.64 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 6 0.02 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 2 NA NA 0 0 125 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.12 NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 3 33065411 175123833 1 4 125 3 1 0 0 0 0.11 1 5 0.01 0 5 5 5 7 7 7 20.06 27.16 69.67 0 2 1 Whitelist LIHC-US 0.54 1 0.01 0 0.48 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 8 0.03 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 4 181116873 181425213 1 1 125 1 0 0 0 0 0.39 0.15 1 0 NA NA NA NA NA NA NA 20.06 0 99.89 0 2 NA Whitelist LIHC-US 0.62 0.35 0 NA 0.59 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 5 65949804 118588185 1 2 125 2 0 0 0 0 0.11 0.46 1 0 0 NA NA NA NA NA NA 20.06 0.76 99.1 0 2 NA Whitelist LIHC-US 0.54 0.7 0 0 0.48 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 6 57869537 70524555 12 12 125 2 5 3 2 0 0.57 0 17 0 0 17 4 6 28 6 9 20.06 58.02 41.83 0 3 2 Whitelist LIHC-US 0.68 0 0 0 0.64 0 Low confidence LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC With other complex events 24 0.1 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 7 4981088 36091995 1 4 125 0 2 0 0 2 0.11 0.42 4 0.01 0 4 3 4 4 3 3 20.06 96.12 3.66 0 3 2 Whitelist LIHC-US 0.68 0.67 0.01 0 0.48 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 6 0.02 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 8 NA NA 0 0 125 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.67 NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 9 75117691 75177380 1 1 125 1 0 0 0 0 0.39 0.35 2 0 NA NA NA NA 5 5 5 20.06 0.24 99.08 0 1 2 Whitelist LIHC-US 0.62 0.6 0 NA 0.59 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 10 13642621 89658267 1 6 125 2 1 0 0 3 0.3 0.83 4 0 0 4 4 4 4 4 4 20.06 62.82 37 0 1 2 Whitelist LIHC-US 0.93 0.97 0 0 0.59 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 9 0.04 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 11 NA NA 0 0 125 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.97 0 NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 12 15784419 97685044 1 11 125 4 3 0 0 4 0.06 0 8 0 0 8 8 8 8 8 8 20.06 35.39 60.87 0 1 2 Whitelist LIHC-US 3 0.68 0 0 0 0.48 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 18 0.07 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 13 NA NA 0 0 125 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.33 NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 14 60275486 67647859 2 4 125 0 0 2 2 0 0.26 0.6 1 0 0 NA NA NA NA NA NA 20.06 0 81.29 0 2 NA Whitelist LIHC-US 0.62 0.82 0 0 0.59 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 8 0.03 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 15 45267847 101870998 1 10 125 0 3 0 1 6 0.11 0 7 0 0 7 3 7 7 3 3 20.06 1.34 82.61 0 2 1 Whitelist LIHC-US 0.86 0.01 0 0 0.48 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 14 0.06 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 16 5107693 5245724 2 2 125 0 0 1 1 0 0.57 0.39 1 0.05 0 NA NA NA NA NA NA 20.06 1.47 98.21 0 2 NA Whitelist LIHC-US 0.68 0.64 0.05 0 0.64 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 17 7547682 57123784 1 15 125 1 0 1 1 12 0.8 0 5 0 0 5 3 4 5 3 3 20.06 19.76 75.79 0 2 1 Whitelist LIHC-US 1 0.85 0 0 0 0.84 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 18 0.07 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 18 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 19 4001904 39037665 3 7 125 2 2 0 2 1 0.57 0 8 0 0 8 0 4 12 3 4 20.06 32.57 67.26 0 1 2 Whitelist LIHC-US 0.96 0 0 0 0.64 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 13 0.05 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 20 NA NA 0 0 125 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.76 NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 21 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b 22 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 0 0 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b X 27577581 147981002 4 6 125 1 0 1 2 2 0.57 0.06 3 0 0 NA NA NA NA NA NA 20.06 0.01 99.76 0 2 1 Whitelist LIHC-US 0.68 0.19 0 0 0.64 0 No LIHC-US ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b LIHC 0.57 1.9 Liver-HCC NA 10 0.04 NA 2 LIHC-US DO22860 TCGA-CC-5260 ca8afb2c-be3d-41e8-8dbc-19fe7ab6154b female alive C22.0 61 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 1 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 2 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 3 NA NA 0 0 34 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.91 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 4 9712113 185192841 18 19 34 7 5 3 3 1 0.49 0 2 0 0 NA NA NA NA NA NA 25.11 55.68 44.3 0 1 2 Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 37 0.54 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 6 66900496 70708712 2 3 34 1 1 0 0 1 0.57 0.05 4 0 0 4 3 4 6 3 3 25.11 98.42 1.44 0 3 2 Whitelist LIHC-US 0.87 0.17 0 0 0.64 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 5 0.07 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 8 139400696 139552997 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.11 0 99.99 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 9 121189005 121301751 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.11 0 99.33 1 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 10 3878375 3904688 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.11 0 99.82 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 12 NA NA 0 0 34 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.88 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 13 62577264 63418473 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.11 0.73 99.27 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 14 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 17 NA NA 0 0 34 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.82 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 22 NA NA 0 0 34 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.59 NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::cab5b264-abab-4bdb-816e-9d2c0ac30629 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US cab5b264-abab-4bdb-816e-9d2c0ac30629 LIHC 0.86 1.91 Liver-HCC NA 0 0 NA 2 LIHC-US DO22986 TCGA-DD-A1EH cab5b264-abab-4bdb-816e-9d2c0ac30629 male alive C22.0 23 NA 1036 NA Included Liver-HCC LIHC US 0 34.08 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 1 62587390 232902623 8 23 82 4 2 0 2 15 0.26 0 6 0 0 6 4 6 9 6 6 17.68 64.8 35.2 0 2 3 Whitelist LIHC-US 13 0.62 0 0 0 0.59 1 Linked to low confidence LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC Canonical without polyploidization 31 0.19 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 2 43929169 187565115 1 2 82 1 1 0 0 0 0.57 0.05 2 NA 0 NA NA NA NA NA NA 17.68 0.08 99.82 0 2 3 Whitelist LIHC-US 0.68 0.15 NA 0 0.64 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 3 4382426 4867698 1 2 82 1 1 0 0 0 0.57 0.13 4 NA 0 4 3 4 5 3 3 17.68 0.09 99.88 0 2 1 Whitelist LIHC-US 0.68 0.32 NA 0 0.64 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 4 0.02 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 4 66480706 124197001 1 3 82 2 0 1 0 0 0.3 0.82 3 0 0 NA NA NA 5 5 5 17.68 0.01 99.98 0 2 1 Whitelist LIHC-US 0.62 0.96 0 0 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 6 0.04 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 5 NA NA 0 0 82 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.49 NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 6 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 7 122184070 122305320 1 1 82 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 17.68 0 99.77 0 2 NA Whitelist LIHC-US 0.62 0.58 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 8 141800036 142111322 1 1 82 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA 4 0 0 17.68 94.9 1.67 0 4 NA Whitelist LIHC-US 0.62 0.32 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 9 33778034 141035750 9 9 82 1 4 2 2 0 0.55 0 10 0 0 10 9 10 15 9 9 17.68 68.87 30.96 0 2 1 Whitelist LIHC-US 0.68 0 0 0 0.64 1 High confidence LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC Canonical without polyploidization 18 0.11 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 10 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 11 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 12 NA NA 0 0 82 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.81 NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 13 24796654 56409610 12 29 82 3 4 3 2 17 0.88 0 5 0 0 5 5 5 5 5 5 17.68 0.48 99.52 0 2 1 Whitelist LIHC-US 0.74 0 0 0 0.91 1 Low confidence LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC Canonical without polyploidization 41 0.25 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 14 38376832 38403759 1 1 82 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.68 0 99.09 0 2 NA Whitelist LIHC-US 0.62 1 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 16 79236506 79648573 1 1 82 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 3 17.68 0.72 99.19 0 2 3 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 17 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 18 38165921 49347307 1 1 82 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 17.68 0 99.99 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 19 37509338 37524246 1 1 82 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.68 0.03 99.53 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 20 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 22 21151872 21374801 1 1 82 0 1 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 17.68 0.43 99.57 0 2 3 Whitelist LIHC-US 0.62 0.84 NA NA 0.59 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 2 0.01 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::d680df09-368e-42b5-b540-45c41ed31042 X NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 1 No LIHC-US d680df09-368e-42b5-b540-45c41ed31042 LIHC 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIHC-US DO44919 TCGA-FV-A2QQ d680df09-368e-42b5-b540-45c41ed31042 male alive C22.0 80 NA 0 NA Included Liver-HCC LIHC US 0 0 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 1 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.9 NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 2 225241750 226532579 1 1 27 1 0 0 0 0 0.39 0.07 2 0 NA NA NA NA NA NA NA 91.85 99.91 0 0 4 5 Whitelist LIHC-US 0.62 0.21 0 NA 0.59 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 2 0.04 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 3 20901418 127446357 1 2 27 2 0 0 0 0 0.11 0.01 4 0 0 4 4 4 6 5 5 91.85 99.95 0 0 3 4 Whitelist LIHC-US 0.54 0.05 0 0 0.48 0 Linked to low confidence LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC After polyploidization 4 0.07 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 5 79131282 139329623 1 4 27 1 0 0 0 3 0.39 0.02 1 NA 0 NA NA NA NA NA NA 91.85 99.86 0 0 5 NA Whitelist LIHC-US 0.68 0.1 NA 0 0.59 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 5 0.09 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 6 62256018 66611039 1 1 27 0 1 0 0 0 0.39 0.22 3 NA NA NA NA NA 4 3 3 91.85 41.81 55.36 0 4 6 Whitelist LIHC-US 0.62 0.45 NA NA 0.59 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 2 0.04 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 8 882836 39730717 8 12 27 2 2 2 2 4 1 0 12 0.01 0 12 5 7 12 5 7 91.85 77.29 22.6 0 4 3 Whitelist LIHC-US 3 0.93 0 0.01 0 1 0 Low confidence LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC With other complex events 20 0.37 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 10 NA NA 0 0 27 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA 7 4 6 0 0 0 0 0 0 Whitelist LIHC-US NA 0.61 NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 20 NA NA 0 0 27 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.08 NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::dfa15fbe-bb14-40ce-afc6-70694112e3e2 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US dfa15fbe-bb14-40ce-afc6-70694112e3e2 LIHC 0.73 4.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22887 TCGA-BC-A10Q dfa15fbe-bb14-40ce-afc6-70694112e3e2 female deceased C22.0 72 1135 NA NA Included Liver-HCC LIHC US 1 37.34 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 1 17700321 53826709 3 22 405 0 0 2 1 19 0.3 0 28 0 0 28 6 9 74 6 9 60.41 71.72 25.31 0 4 5 Whitelist LIHC-US 12_3 0.99 0 0 0 0.59 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 25 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 2 201683045 201701077 2 2 405 0 2 0 0 0 0.11 0.28 3 0 0 NA NA NA 42 5 11 60.41 73.58 23.47 0 4 5 Whitelist LIHC-US 0.54 0.53 0 0 0.48 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 3 49271633 172369974 3 10 405 0 1 1 1 7 0.8 0.1 33 0 0 33 5 7 49 5 7 60.41 30.15 66.71 0 2 3 Whitelist LIHC-US 1_11 0.68 0.26 0 0 0.84 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 13 0.02 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 4 77699622 77796753 2 2 405 0 2 0 0 0 0.11 1 4 0 0 4 3 4 37 4 6 60.41 38.67 58.96 0 3 2 Whitelist LIHC-US 0.54 1 0 0 0.48 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 5 7970388 179529063 1 19 405 2 7 0 0 10 0 0.92 21 0 0 21 5 13 24 5 13 60.41 89.49 7.84 0 2 4 Whitelist LIHC-US 1_19 0.21 1 0 0 0.08 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 28 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 6 44136682 44173120 2 2 405 0 1 0 1 0 0.57 0.34 5 0 0 5 0 3 43 4 10 60.41 95.93 3.93 0 4 1 Whitelist LIHC-US 0.68 0.6 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 7 98867496 100732396 2 2 405 0 0 1 1 0 0.57 0.1 5 0 0 5 3 4 22 6 9 60.41 9.03 88.42 0 2 4 Whitelist LIHC-US 0.68 0.26 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 8 9891933 133595514 1 9 405 2 4 1 0 2 0.17 0.05 15 0 0 15 5 6 20 5 5 60.41 84.71 11.87 0 3 4 Whitelist LIHC-US 0.54 0.17 0 0 0.59 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 16 0.02 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 9 120881772 121088508 4 5 405 0 2 1 1 1 0.57 0 4 0 0 4 3 4 40 8 11 60.41 40.8 58.5 0 3 2 Whitelist LIHC-US 0.68 0 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 9 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 10 12324933 114133790 7 15 405 0 2 3 2 8 0.44 0.19 28 0 0 28 7 10 32 7 10 60.41 83.78 16.04 0 4 2 Whitelist LIHC-US 17 0.93 0.41 0 0 0.64 1 High confidence LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC With other complex events 22 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 11 781704 129805938 1 31 405 1 8 1 0 21 0 0 27 0 0 27 5 7 28 5 7 60.41 47.21 49.32 0 2 4 Whitelist LIHC-US 1_3 0.7 0.02 0 0 0.05 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 41 0.05 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 12 6457439 132375237 1 30 405 1 8 0 0 21 0 0 29 0 0 29 6 7 30 6 7 60.41 84.24 12.02 0 2 3 Whitelist LIHC-US 1_17 0.41 0.01 0 0 0.02 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 39 0.05 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 13 46670854 94727861 1 4 405 0 1 0 1 2 0.57 0 3 0 0 NA NA NA 5 3 5 60.41 97.2 0.02 1 1 2 Whitelist LIHC-US 0.68 0.02 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 14 35733106 94913644 1 12 405 0 4 0 0 8 0.01 0.67 13 0 0 13 4 7 15 4 7 60.41 0.27 96.02 0 2 4 Whitelist LIHC-US 1 0.41 0.87 0 0 0.16 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 16 0.02 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 15 74995476 75169568 2 2 405 0 2 0 0 0 0.11 0 4 0 0 4 3 4 29 5 11 60.41 79.81 15.41 0 5 3 Whitelist LIHC-US 0.54 0.01 0 0 0.48 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 16 30684481 71640962 2 2 405 0 0 1 1 0 0.57 0.16 2 0 0 NA NA NA 5 3 5 60.41 3.64 96.01 0 2 4 Whitelist LIHC-US 0.68 0.37 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 17 19411292 80161265 10 25 405 1 4 5 0 15 0.08 0 41 0 0 41 6 10 48 6 10 60.41 94.46 0.01 0 4 6 Whitelist LIHC-US 1_10_12 0.68 0 0 0 0.48 1 Linked to high confidence LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC With other complex events 35 0.04 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 18 29023272 30155843 5 5 405 2 3 0 0 0 0.14 0.64 4 0 0 4 3 4 14 5 8 60.41 4.13 91.22 0 4 2 Whitelist LIHC-US 0.62 0.85 0 0 0.59 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 10 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 19 3471920 49993307 1 17 405 2 3 0 1 11 0.34 0 21 0 0 21 4 6 25 5 6 60.41 87.39 5.08 0 2 3 Whitelist LIHC-US 5_8 0.93 0 0 0 0.59 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 23 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 20 349654 49110852 1 18 405 0 3 0 0 15 0.03 0 16 0 0 16 3 5 19 3 5 60.41 42.83 50.05 0 2 4 Whitelist LIHC-US 11_12 0.64 0 0 0 0.33 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 21 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 21 46240583 46344203 1 1 405 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA 5 4 4 60.41 74.88 2.48 0 4 6 Whitelist LIHC-US 0.62 0.5 NA NA 0.59 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 22 50294019 50423953 2 2 405 1 1 0 0 0 0.57 0.03 2 0 0 NA NA NA 11 3 7 60.41 86.91 0.26 0 1 2 Whitelist LIHC-US 0.68 0.12 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 4 0 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::ee63c44b-91f4-4004-8dea-192eab527036 X 109079809 123049707 2 3 405 1 1 0 0 1 0.57 0.5 1 0 0 NA NA NA NA NA NA 60.41 100 0 0 1 NA Whitelist LIHC-US 0.87 0.74 0 0 0.64 1 No LIHC-US ee63c44b-91f4-4004-8dea-192eab527036 LIHC 0.67 2.88 Liver-HCC NA 5 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:3 6 LIHC-US DO52171 TCGA-BW-A5NO ee63c44b-91f4-4004-8dea-192eab527036 male alive C22.0 50 NA 20 NA Included Liver-HCC LIHC US 0 0.66 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 1 43634162 248907089 2 4 29 0 1 0 3 0 0.11 0.01 11 0 0 11 7 7 12 7 7 24.2 53.44 46.42 0 4 5 Whitelist LIHC-US 0.54 0.03 0 0 0.48 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 8 0.14 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 2 NA NA 0 0 29 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.75 NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 3 60993732 61006457 1 1 29 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 24.2 5.8 94.19 0 2 NA Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 4 37728616 37939748 1 1 29 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 24.2 0.11 99.88 0 2 3 Whitelist LIHC-US 0.62 0.9 NA NA 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 5 80737918 176834913 1 6 29 0 2 1 0 3 0.3 0.01 3 0 0 NA NA NA NA NA NA 24.2 0.02 99.83 1 2 3 Whitelist LIHC-US 0.93 0.04 0 0 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 9 0.16 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 7 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 8 16081289 40898168 1 2 29 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 4 4 24.2 94.75 1.72 0 1 2 Whitelist LIHC-US 0.54 0.87 NA 0 0.48 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 4 0.07 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 9 15078966 32171742 1 4 29 1 1 1 1 0 1 0 2 0 0 NA NA NA 6 6 6 24.2 72.99 26.31 0 1 2 Whitelist LIHC-US 1 0.01 0 0 1 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 8 0.14 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 10 117719986 117854637 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.2 0.1 99.73 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 12 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 16 74922291 89562702 1 2 29 0 2 0 0 0 0.11 0.18 2 NA 0 NA NA NA NA NA NA 24.2 0.19 99.37 0 2 3 Whitelist LIHC-US 0.54 0.4 NA 0 0.48 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 4 0.07 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 18 NA NA 0 0 29 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.14 NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 19 23835845 23865572 1 1 29 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 24.2 0 99.83 0 2 NA Whitelist LIHC-US 0.62 0.69 NA NA 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 0 0 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f15279dd-5d12-460b-9bd1-b4f95681ca65 X 104909506 105059355 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.2 0.1 99.9 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US f15279dd-5d12-460b-9bd1-b4f95681ca65 LIHC 0.44 1.89 Liver-HCC NA 2 0.03 NA 2 LIHC-US DO22935 TCGA-EP-A3RK f15279dd-5d12-460b-9bd1-b4f95681ca65 male alive C22.0 73 NA 13 NA Included Liver-HCC LIHC US 0 0.43 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 1 74914904 80423508 2 2 14 1 0 0 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 12.83 3.27 96.73 0 2 NA Whitelist LIHC-US 0.68 0 0 0 0.64 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 4 0.14 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 2 64296301 64509125 1 1 14 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.83 0.09 99.8 0 2 3 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 2 0.07 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 3 107680393 108284776 1 1 14 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.83 0.31 99.54 0 1 2 Whitelist LIHC-US 0.62 1 NA NA 0.59 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 2 0.07 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 4 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 1 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 7 NA NA 0 0 14 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIHC-US NA 0.03 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 9 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 10 NA NA 0 0 14 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.73 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 12 NA NA 0 0 14 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.73 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 17 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.57 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 19 NA NA 0 0 14 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.48 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 20 NA NA 0 0 14 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.51 NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f435ec00-0db8-46b4-96bf-890a9d931df3 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f435ec00-0db8-46b4-96bf-890a9d931df3 LIHC 0.26 1.98 Liver-HCC NA 0 0 NA 2 LIHC-US DO22866 TCGA-G3-A25V f435ec00-0db8-46b4-96bf-890a9d931df3 male alive C22.0 68 NA 69 NA Included Liver-HCC LIHC US 0 2.27 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 1 21171874 231283112 1 7 111 1 3 1 2 0 0.67 0.6 3 0 0 NA NA NA NA NA NA 79.09 100 0 0 3 4 Whitelist LIHC-US 0.77 0.81 0 0 0.74 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 14 0.06 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 2 10686263 234248489 1 5 111 5 0 0 0 0 0 0.31 6 0 0 6 6 6 7 7 7 79.09 99.9 0 0 3 4 Whitelist LIHC-US 0.1 0.56 0 0 0.07 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 10 0.05 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 3 18657637 137367416 1 5 111 5 0 0 0 0 0 0.71 8 0 0 8 8 8 9 9 9 79.09 63.89 35.96 0 2 3 Whitelist LIHC-US 0.1 0.9 0 0 0.07 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 10 0.05 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 4 3437435 161294672 1 3 111 2 1 0 0 0 0.3 0.25 2 0.02 0.04 NA NA NA NA NA NA 79.09 99.96 0 0 3 4 Whitelist LIHC-US 0.62 0.49 0.02 0.04 0.59 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 5 NA NA 0 0 111 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.78 0 NA NA 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 6 13567393 13586751 1 1 111 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 79.09 39.36 60.47 0 3 NA Whitelist LIHC-US 0.62 0.37 NA NA 0.59 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 7 56681814 152008820 1 3 111 1 2 0 0 0 0.3 0.39 9 0 0 9 5 9 9 5 5 79.09 99.78 0 0 4 3 Whitelist LIHC-US 0.62 0.64 0 0 0.59 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 8 130801586 130816980 1 1 111 1 0 0 0 0 0.39 0.66 2 0 NA NA NA NA 5 4 4 79.09 99.86 0 0 4 5 Whitelist LIHC-US 0.62 0.87 0 NA 0.59 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 2 0.01 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 9 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 10 33507746 60717185 1 3 111 3 0 0 0 0 0.03 1 2 0 0 NA NA NA 4 4 4 79.09 59.65 40.17 0 2 3 Whitelist LIHC-US 0.41 1 0 0 0.33 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 11 16128594 112920032 1 5 111 0 2 2 1 0 0.53 0.04 9 0 0 9 7 9 9 7 7 79.09 99.03 0.56 0 3 4 Whitelist LIHC-US 0.68 0.14 0 0 0.64 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 10 0.05 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 12 40492813 70412796 1 4 111 3 1 0 0 0 0.11 1 6 0 0 6 5 6 7 5 5 79.09 99.92 0 0 4 3 Whitelist LIHC-US 0.54 1 0 0 0.48 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 8 0.04 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 13 101415043 114210712 1 2 111 0 0 2 0 0 0.11 0.79 3 0 0 NA NA NA 4 3 3 79.09 0.05 99.12 0 1 2 Whitelist LIHC-US 0.54 0.95 0 0 0.48 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 4 0.02 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 14 NA NA 0 0 111 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA 0.81 NA NA NA 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 15 83936266 83966059 3 3 111 2 1 0 0 0 0.3 0 1 0 0 NA NA NA 7 5 5 79.09 99.9 0 0 4 NA Whitelist LIHC-US 0.62 0.02 0 0 0.59 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 16 7033411 86743703 1 4 111 1 1 1 0 1 0.8 0.23 5 0 0 5 4 5 6 4 6 79.09 94.4 0.81 0 3 4 Whitelist LIHC-US 0.68 0.46 0 0 0.84 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 7 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 17 57919480 58166396 3 3 111 0 1 1 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 79.09 99.12 0 0 3 5 Whitelist LIHC-US 0.87 0.02 0 0 0.84 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 18 5855406 27586777 1 2 111 1 1 0 0 0 0.57 0.23 3 0 0 NA NA NA 4 3 3 79.09 99.99 0 0 4 5 Whitelist LIHC-US 0.68 0.46 0 0 0.64 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 4 0.02 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 19 4463029 52518050 2 4 111 1 1 1 1 0 1 0.18 5 0.02 0 5 5 5 6 6 6 79.09 91.39 0 0 4 3 Whitelist LIHC-US 1 0.39 0.02 0 1 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 8 0.04 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 20 32035105 33592839 2 4 111 1 0 1 2 0 0.57 0.09 3 0 0 NA NA NA NA NA NA 79.09 98.96 0 0 3 4 Whitelist LIHC-US 0.68 0.25 0 0 0.64 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 8 0.04 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 21 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 22 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIHC-US NA NA NA NA NA 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 0 0 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LIHC-US::f6e5979d-d6a9-4408-bd1b-1b37d1064e83 X 36437755 105063432 1 3 111 1 1 0 1 0 0.8 1 3 0 0 NA NA NA NA NA NA 79.09 96.12 0 0 3 4 Whitelist LIHC-US 0.87 1 0 0 0.84 0 No LIHC-US f6e5979d-d6a9-4408-bd1b-1b37d1064e83 LIHC 0.7 3.19 Liver-HCC NA 6 0.03 NA 4 LIHC-US DO22884 TCGA-G3-A25T f6e5979d-d6a9-4408-bd1b-1b37d1064e83 female alive C22.0 45 NA 1175 NA Included Liver-HCC LIHC US 0 38.65 LINC-JP::HX10 1 243411413 243532943 1 1 51 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 5 4 5 37.46 48.54 51.45 0 2 4 Whitelist LINC-JP 0.62 0.95 NA NA 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 2 202713001 202906032 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.46 0.08 99.81 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 3 NA NA 0 0 51 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.51 NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 4 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 5 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 6 47833506 47878250 1 1 51 1 0 0 0 0 0.39 0.23 1 0 NA NA NA NA NA NA NA 37.46 34.2 62.88 0 3 NA Whitelist LINC-JP 0.62 0.47 0 NA 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 7 84395877 156926048 1 4 51 1 2 0 0 1 0.3 0.35 4 0 0 4 4 4 5 5 5 37.46 45.29 54.45 0 2 3 Whitelist LINC-JP 0.62 0.61 0 0 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 7 0.07 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 9 NA NA 0 0 51 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 10 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 11 7565666 69078196 1 3 51 2 0 1 0 0 0.3 0.01 8 0 0 8 7 8 9 7 7 37.46 0.44 99.01 0 3 4 Whitelist LINC-JP 0.62 0.04 0 0 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 6 0.06 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 12 24787975 34446548 1 3 51 0 1 0 1 1 0.57 0.3 5 0 0 5 5 5 6 6 6 37.46 21.05 75.27 0 2 1 Whitelist LINC-JP 0.87 0.55 0 0 0.64 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 5 0.05 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 15 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 16 27951132 28852739 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 37.46 48.85 51.11 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 17 694982 12501666 18 18 51 7 5 3 3 0 0.49 0 12 0 0 12 12 12 13 12 12 37.46 58.77 41.22 0 1 2 Whitelist LINC-JP 0.68 0 0 0 0.64 1 High confidence LINC-JP HX10 LINC 0.51 2.02 Liver-HCC Canonical without polyploidization 36 0.35 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 19 46640733 51876031 2 2 51 1 0 0 1 0 0.57 0.08 1 0 0 NA NA NA NA NA NA 37.46 0 99.56 0 2 NA Whitelist LINC-JP 0.68 0.23 0 0 0.64 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 4 0.04 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 22 18357276 18390560 1 1 51 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 37.46 100 0 0 1 NA Whitelist LINC-JP 0.62 0.7 NA NA 0.59 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX10 X NA NA 0 0 51 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 1 No LINC-JP HX10 LINC 0.51 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45035 HX10 male alive chemotherapy unknown 58 1954 1954 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 64.28 LINC-JP::HX11 1 19776949 112077449 8 8 42 3 3 0 2 0 0.39 0.02 14 0 0 14 14 14 19 17 18 26.18 69.48 27.54 0 1 2 Whitelist LINC-JP 0.62 0.07 0 0 0.59 1 High confidence LINC-JP HX11 LINC 0.36 1.9 Liver-HCC Canonical without polyploidization 16 0.19 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 2 15286799 15469078 1 1 42 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 26.18 0 99.91 0 2 NA Whitelist LINC-JP 0.62 0.5 NA NA 0.59 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 2 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 3 NA NA 0 0 42 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.62 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 4 NA NA 0 0 42 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 5 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 6 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 7 NA NA 0 0 42 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 8 119930944 119992198 1 1 42 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 3 26.18 96.58 0 0 4 5 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 2 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 9 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 10 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 11 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 12 26835094 63066709 1 2 42 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 26.18 0.22 99.69 0 1 2 Whitelist LINC-JP 0.54 1 NA 0 0.48 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 4 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 13 NA NA 0 0 42 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.86 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 16 7537773 31271320 9 9 42 3 1 2 3 0 0.75 0 12 0 0 12 4 4 13 4 4 26.18 12.34 87.32 0 2 1 Whitelist LINC-JP 0.85 0 0 0 0.83 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 18 0.21 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 17 46083438 46114346 1 1 42 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.18 27.27 68.22 0 2 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 2 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 18 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 19 NA NA 0 0 42 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LINC-JP NA 0.16 NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 20 329100 43089261 1 5 42 2 2 0 0 1 0.26 0 4 0 0 4 4 4 5 5 5 26.18 0.17 99.52 0 2 3 Whitelist LINC-JP 0.62 0 0 0 0.59 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 9 0.11 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 21 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX11 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX11 LINC 0.36 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577521_C_T;17_7577523_T_G,CN:1 2 LINC-JP DO45037 HX11 female deceased no treatment 67 879 879 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 28.91 LINC-JP::HX12 1 33161622 51464276 1 4 66 2 0 0 0 2 0.11 0.36 3 0 0 NA NA NA 4 3 3 83.36 100 0 0 4 5 Whitelist LINC-JP 0.68 0.61 0 0 0.48 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 2 103272928 111487823 2 2 66 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA 5 3 5 83.36 83.73 16.18 0 4 NA Whitelist LINC-JP 0.68 0.96 0 0 0.64 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 3 NA NA 0 0 66 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.25 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 4 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 5 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 6 NA NA 0 0 66 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.69 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 7 129684897 129968735 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 4 4 83.36 97.35 0 0 1 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 8 3298843 105391100 1 3 66 3 0 0 0 0 0.03 1 8 0.02 0.08 8 4 8 9 4 4 83.36 99.67 0.32 0 2 4 Whitelist LINC-JP 0.41 1 0.02 0.08 0.33 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 9 33640013 38709640 2 13 66 2 0 0 0 11 0.11 0 13 0 0 13 3 5 18 4 5 83.36 70.19 29.65 0 5 2 Whitelist LINC-JP 0.99 0 0 0 0.48 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 15 0.11 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 10 9728218 11683576 1 1 66 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 83.36 99.8 0 0 3 4 Whitelist LINC-JP 0.62 0.93 NA NA 0.59 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 11 55984287 68926412 4 7 66 1 2 0 1 3 0.57 0 9 0 0 9 3 4 11 3 4 83.36 51.53 48.04 0 1 8 Whitelist LINC-JP 0.77 0 0 0 0.64 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 11 0.08 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 12 32673994 64616243 1 2 66 1 0 1 0 0 0.57 0.77 4 NA 0 4 3 4 7 5 7 83.36 95.85 0.05 0 4 2 Whitelist LINC-JP 0.68 0.93 NA 0 0.64 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 13 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 14 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 15 29329993 102165441 14 23 66 1 3 7 3 9 0.14 0 17 0 0 17 5 9 18 5 5 83.36 99.64 0 0 4 3 Whitelist LINC-JP 0.62 0 0 0 0.59 0 Low confidence LINC-JP HX12 LINC 0.65 3.6 Liver-HCC With other complex events 37 0.28 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 16 2039108 2261260 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 83.36 70.26 29.39 0 0 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 17 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 18 1246524 1392758 2 2 66 0 0 1 1 0 0.57 0.7 2 NA 0 NA NA NA 5 5 5 83.36 99.67 0.32 0 2 4 Whitelist LINC-JP 0.68 0.89 NA 0 0.64 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 19 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 20 NA NA 0 0 66 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.86 NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 22 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX12 X NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX12 LINC 0.65 3.6 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:2 4 LINC-JP DO45039 HX12 male deceased no treatment 58 951 951 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 31.28 LINC-JP::HX13 1 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 2 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 3 NA NA 0 0 70 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.48 NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 4 NA NA 0 0 70 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.25 NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 5 NA NA 0 0 70 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.95 NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 6 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 7 NA NA 0 0 70 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.94 NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 8 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 9 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 10 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 11 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 12 9190059 9380998 1 1 70 0 1 0 0 0 0.39 0.26 3 NA NA NA NA NA 6 3 3 21.18 24.37 71.89 0 1 2 Whitelist LINC-JP 0.62 0.51 NA NA 0.59 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 13 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 14 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 15 81624512 81825492 1 1 70 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.18 0.2 99.8 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 16 NA NA 0 0 70 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.69 NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 17 21799640 31416192 1 1 70 0 1 0 0 0 0.39 0.71 3 NA NA NA NA NA 6 3 6 21.18 44.88 50.18 0 1 2 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 18 22084297 23754995 1 3 70 0 0 2 0 1 0.11 0.44 5 NA 0 5 0 4 7 0 4 21.18 94.93 0.42 0 1 2 Whitelist LINC-JP 0.62 0.69 NA 0 0.48 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 5 0.04 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 19 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 20 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 21 22038038 22072997 1 1 70 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 5 5 5 21.18 0.39 77.34 0 1 2 Whitelist LINC-JP 0.62 0.8 NA NA 0.59 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 22 17088659 51192718 50 50 70 14 13 12 11 0 0.94 0 75 0 0 75 66 66 75 66 66 21.18 70.14 29.64 0 2 1 Whitelist LINC-JP 0.96 0 0 0 0.96 1 High confidence LINC-JP HX13 LINC 0.74 1.97 Liver-HCC Canonical without polyploidization 100 0.71 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX13 X NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX13 LINC 0.74 1.97 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 LINC-JP DO45041 HX13 female alive no treatment 69 2188 2188 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 71.97 LINC-JP::HX14 1 NA NA 0 0 70 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.15 NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 2 168625141 176581502 4 4 70 2 0 1 1 0 0.57 0.19 5 0 0 5 5 5 14 6 6 30.73 33.47 66.43 0 5 3 Whitelist LINC-JP 0.68 0.41 0 0 0.64 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 8 0.06 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 3 41130179 41146024 1 1 70 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 30.73 0.01 99.86 0 1 2 Whitelist LINC-JP 0.62 0.26 NA NA 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 4 NA NA 0 0 70 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.84 NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 5 89561100 161993858 1 4 70 2 0 0 1 1 0.3 1 5 0 0 5 5 5 5 5 5 30.73 7.29 92.57 0 2 1 Whitelist LINC-JP 0.54 1 0 0 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 7 0.05 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 6 55148278 56194237 3 3 70 1 0 1 1 0 0.8 1 2 0 0 NA NA NA NA NA NA 30.73 0.21 99.61 0 1 2 Whitelist LINC-JP 0.87 1 0 0 0.84 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 6 0.04 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 7 NA NA 0 0 70 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.41 NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 8 11152586 52033115 12 17 70 3 2 3 4 5 0.88 0 25 0 0 25 5 8 25 5 8 30.73 89.25 10.74 0 2 1 Whitelist LINC-JP 0.62 0 0 0 0.91 0 Low confidence LINC-JP HX14 LINC 0.86 1.84 Liver-HCC With other complex events 29 0.21 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 9 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 10 NA NA 0 0 70 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.63 NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 11 66182697 70437499 3 4 70 0 0 2 1 1 0.3 0.01 9 0 0 9 4 5 12 5 6 30.73 50.25 49.33 0 3 2 Whitelist LINC-JP 0.62 0.03 0 0 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 7 0.05 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 12 69470154 69534291 1 1 70 0 1 0 0 0 0.39 1 4 NA 0 4 4 4 5 5 5 30.73 0.04 99.94 0 2 3 Whitelist LINC-JP 0.62 1 NA 0 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 13 66989144 67876025 1 1 70 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 30.73 0.77 84.94 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 14 NA NA 0 0 70 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 15 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 16 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 17 21146194 21190248 1 1 70 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 6 4 4 30.73 16.8 83.14 0 1 2 Whitelist LINC-JP 0.62 0.14 0 NA 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 18 28339919 28409963 1 1 70 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 3 3 30.73 0.57 99.42 0 2 3 Whitelist LINC-JP 0.62 0.69 NA NA 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 19 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 20 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 21 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 22 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX14 X 144277861 144500938 1 2 70 0 0 0 1 1 0.39 1 1 NA 0 NA NA NA NA NA NA 30.73 100 0 0 1 NA Whitelist LINC-JP 0.68 1 NA 0 0.59 0 No LINC-JP HX14 LINC 0.86 1.84 Liver-HCC NA 3 0.02 nonsynonymous_SNV,17_7578443_T_A,CN:1 2 LINC-JP DO45043 HX14 male deceased no treatment 56 1634 1634 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 53.75 LINC-JP::HX15 1 3601542 236223702 1 4 62 2 1 0 1 0 0.57 1 9 0 0 9 4 9 9 4 4 39.04 48.38 48.33 0 2 3 Whitelist LINC-JP 0.68 1 0 0 0.64 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 8 0.06 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 2 39700680 187140392 1 7 62 5 1 0 0 1 0.01 0.36 9 0 0 9 7 9 9 7 7 39.04 0.27 99.63 0 2 1 Whitelist LINC-JP 0.47 0.61 0 0 0.19 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 13 0.1 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 3 23315429 146994839 1 5 62 5 0 0 0 0 0 0.45 7 0 0 7 5 7 7 5 7 39.04 72.63 27.23 0 2 3 Whitelist LINC-JP 0.1 0.69 0 0 0.07 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 10 0.08 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 4 74209486 151632125 1 3 62 2 1 0 0 0 0.3 0.8 6 0 0 6 3 6 7 3 3 39.04 0.38 99.39 0 2 1 Whitelist LINC-JP 0.62 0.95 0 0 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 6 0.05 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 5 68957 171535338 1 7 62 4 0 0 0 3 0.01 0.11 7 0 0 7 4 5 7 4 4 39.04 99.96 0 0 3 4 Whitelist LINC-JP 0.47 0.29 0 0 0.16 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 11 0.09 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 6 30584808 162989005 1 2 62 2 0 0 0 0 0.11 0.59 1 NA 0.02 NA NA NA NA NA NA 39.04 0 99.74 0 2 NA Whitelist LINC-JP 0.54 0.81 NA 0.02 0.48 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 4 0.03 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 7 22177713 156365743 1 6 62 3 1 1 1 0 0.57 0.15 3 0 0 NA NA NA NA NA NA 39.04 95.49 4.28 0 3 2 Whitelist LINC-JP 0.68 0.35 0 0 0.64 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 12 0.1 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 8 42395982 121960665 1 3 62 1 1 0 1 0 0.8 0.56 5 0 0 5 3 5 5 3 3 39.04 95.99 0 0 5 1 Whitelist LINC-JP 0.87 0.78 0 0 0.84 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 6 0.05 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 9 112180956 112865964 1 1 62 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 39.04 0.49 99.37 0 1 2 Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 10 27255227 114218412 1 6 62 3 3 0 0 0 0.11 0.06 5 0 0 5 5 5 5 5 5 39.04 0.29 99.64 0 2 3 Whitelist LINC-JP 0.54 0.2 0 0 0.48 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 12 0.1 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 11 70036107 78190915 1 4 62 1 1 0 0 2 0.57 0.21 2 0 0 NA NA NA NA NA NA 39.04 0.21 99.64 0 2 3 Whitelist LINC-JP 0.62 0.44 0 0 0.64 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 6 0.05 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 12 112088322 112336222 1 1 62 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 39.04 0 99.92 0 2 NA Whitelist LINC-JP 0.62 0.62 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 13 42139803 42385440 1 1 62 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 39.04 85.49 0.21 0 2 3 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 14 62926693 95946247 1 2 62 1 1 0 0 0 0.57 0.45 4 0 0 4 3 4 5 3 3 39.04 84.07 0.02 0 3 2 Whitelist LINC-JP 0.68 0.69 0 0 0.64 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 4 0.03 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 15 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 0 0 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 16 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 0 0 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 17 1682228 1918043 1 1 62 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA NA NA NA 39.04 0.29 99.69 0 1 2 Whitelist LINC-JP 0.62 0.89 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 18 10680807 11157268 1 1 62 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 39.04 99.29 0.61 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 19 45439597 45573152 1 1 62 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 39.04 0.23 99.33 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 20 15489467 15571336 1 1 62 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 39.04 99.02 0 0 3 NA Whitelist LINC-JP 0.62 0.63 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 0 0 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 22 NA NA 0 0 62 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 0 0 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX15 X 63388445 63452234 1 1 62 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 39.04 100 0 0 1 NA Whitelist LINC-JP 0.62 0.93 NA NA 0.59 0 No LINC-JP HX15 LINC 0.64 2.37 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45045 HX15 male alive no treatment 57 1768 1768 Current smoker (includes daily smokers non-daily/occasional smokers) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 58.16 LINC-JP::HX16 1 40156763 40580563 1 1 37 0 1 0 0 0 0.39 0.36 1 NA NA NA NA NA 6 4 5 74.61 75.53 21.5 0 3 NA Whitelist LINC-JP 0.62 0.62 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 2 NA NA 0 0 37 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LINC-JP NA 0.78 NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 3 106252759 106430785 1 1 37 0 0 0 1 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 74.61 99.78 0.09 0 2 3 Whitelist LINC-JP 0.62 0.58 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 4 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 5 162292644 162330034 1 1 37 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 7 3 3 74.61 97.2 0.25 0 4 6 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 6 38079626 167807723 1 5 37 0 1 1 2 1 0.57 0.07 8 0 0 8 3 4 8 3 3 74.61 97.11 0 0 4 3 Whitelist LINC-JP 0.68 0.21 0 0 0.64 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 9 0.12 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 7 66917394 146593309 1 5 37 2 0 0 0 3 0.11 0 5 0 0 5 0 4 7 0 4 74.61 99.63 0.15 0 0 1 Whitelist LINC-JP 0.62 0.02 0 0 0.48 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 7 0.09 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 8 48278378 48609557 1 1 37 0 0 1 0 0 0.39 0.71 2 NA NA NA NA NA 4 0 0 74.61 96.46 0 0 3 7 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 9 23842139 134438170 1 9 37 1 0 2 2 4 0.53 0 16 0 0 16 3 10 18 3 10 74.61 97.45 0 0 3 6 Whitelist LINC-JP 0.68 0 0 0 0.64 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 14 0.19 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 11 NA NA 0 0 37 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LINC-JP NA 0.89 NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 16 2592301 2836521 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 74.61 99.89 0 0 3 4 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 17 NA NA 0 0 37 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist LINC-JP NA 0.22 NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 18 19774061 25309774 3 3 37 1 2 0 0 0 0.3 0 6 0 0 6 0 4 9 0 5 74.61 19.96 74.32 0 2 3 Whitelist LINC-JP 0.62 0.02 0 0 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 6 0.08 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 20 56020754 56309285 1 1 37 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA 5 3 3 74.61 99.01 0 0 7 8 Whitelist LINC-JP 0.62 0.78 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 22 50194663 50903067 1 1 37 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA 5 3 3 74.61 88.49 0 0 5 NA Whitelist LINC-JP 0.62 0.21 NA NA 0.59 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX16 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX16 LINC 0.41 3.62 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578403_A_C,CN:1 3 LINC-JP DO45047 HX16 female deceased no treatment 40 1133 1133 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 37.27 LINC-JP::HX17 1 NA NA 0 0 44 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.5 NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 2 148647600 148790675 1 1 44 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 42.47 0.06 99.83 0 1 2 Whitelist LINC-JP 0.62 0.4 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 3 1105011 158374536 1 5 44 4 0 0 0 1 0.01 0.23 3 0 0 NA NA NA 4 4 4 42.47 52.97 46.86 0 2 3 Whitelist LINC-JP 0.45 0.47 0 0 0.16 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 9 0.1 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 4 40969112 41126381 1 1 44 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 42.47 0.08 99.72 0 1 2 Whitelist LINC-JP 0.62 0.93 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 5 NA NA 0 0 44 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 6 43506896 43568717 1 1 44 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA 6 6 6 42.47 33.61 63.55 0 3 NA Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 7 65992432 133459368 1 2 44 2 0 0 0 0 0.11 0.51 3 0 0 NA NA NA 4 4 4 42.47 99.78 0 0 4 3 Whitelist LINC-JP 0.54 0.75 0 0 0.48 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 8 10654755 144152590 1 2 44 1 1 0 0 0 0.57 1 4 NA 0.04 4 3 4 5 3 3 42.47 0.07 99.92 0 2 1 Whitelist LINC-JP 0.68 1 NA 0.04 0.64 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 9 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 10 72039143 114730701 1 3 44 1 0 1 0 1 0.57 0.05 4 0 0 4 3 4 5 3 3 42.47 76.13 23.75 0 1 0 Whitelist LINC-JP 0.62 0.16 0 0 0.64 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 5 0.06 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 11 19730216 113168096 1 5 44 4 0 0 0 1 0.01 0.02 7 0 0 7 7 7 8 8 8 42.47 74.75 24.82 0 2 3 Whitelist LINC-JP 0.1 0.07 0 0 0.16 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 9 0.1 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 12 46185763 133293628 1 2 44 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 42.47 6.27 93.23 0 1 2 Whitelist LINC-JP 0.54 1 NA 0 0.48 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 13 111957875 111978080 1 1 44 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 4 3 4 42.47 46.91 53.09 0 1 3 Whitelist LINC-JP 0.62 0.87 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 14 68246116 68450110 1 1 44 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 42.47 99.09 0 0 3 NA Whitelist LINC-JP 0.62 0.65 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 15 33114644 101653873 1 3 44 2 0 0 0 1 0.11 0.03 5 0 0 5 3 4 6 3 4 42.47 81.54 18.37 0 2 4 Whitelist LINC-JP 0.41 0.12 0 0 0.48 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 5 0.06 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 16 29657072 83706251 1 3 44 1 1 0 0 1 0.57 0.11 4 NA 0 4 3 4 4 3 3 42.47 8.86 86.67 0 2 1 Whitelist LINC-JP 0.87 0.29 NA 0 0.64 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 5 0.06 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 17 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 18 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 20 30836255 31029943 1 1 44 0 1 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 42.47 84.76 14.26 0 3 NA Whitelist LINC-JP 0.62 0.48 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 21 43569936 43585785 1 1 44 1 0 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 42.47 77.35 0 0 3 NA Whitelist LINC-JP 0.62 0.67 NA NA 0.59 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 0 0 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX17 X 122365905 122397133 2 2 44 0 0 1 1 0 0.57 0.28 3 0 0 NA NA NA 6 6 6 42.47 0.95 99.05 0 2 1 Whitelist LINC-JP 0.68 0.53 0.01 0 0.64 0 No LINC-JP HX17 LINC 0.8 2.43 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45049 HX17 male alive no treatment 73 1905 1905 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Liver-HCC LINC JP 1 62.66 LINC-JP::HX18 1 54757026 226110751 1 5 34 1 1 0 1 2 0.8 0.05 8 0 0 8 4 6 8 4 4 27.82 97.02 0 0 5 4 Whitelist LINC-JP 0.93 0.16 0 0 0.84 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 8 0.12 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 2 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 3 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 4 1021697 68443688 3 3 34 1 0 1 1 0 0.8 0 14 0 0 14 6 9 18 6 6 27.82 99.72 0.03 0 3 5 Whitelist LINC-JP 0.87 0 0 0 0.84 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 6 0.09 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 5 NA NA 0 0 34 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 8 NA NA 0 0 34 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.89 NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 9 131983535 132426182 1 4 34 0 1 0 0 3 0.39 0.04 3 NA 0 NA NA NA 4 0 3 27.82 0.31 99.01 0 2 3 Whitelist LINC-JP 0.68 0.15 NA 0 0.59 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 5 0.07 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 10 98395743 98428717 1 1 34 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.82 0.02 99.8 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 11 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 13 56590909 77081651 1 2 34 1 0 0 1 0 0.57 0.33 5 NA 0 5 5 5 6 6 6 27.82 58.08 41.92 0 2 1 Whitelist LINC-JP 0.68 0.58 NA 0 0.64 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 4 0.06 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 16 398910 440539 2 2 34 1 0 0 1 0 0.57 0 3 0 0 NA NA NA 17 6 8 27.82 65.77 34.14 0 1 2 Whitelist LINC-JP 0.68 0 0 0 0.64 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 4 0.06 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 17 73747092 74370285 1 2 34 0 2 0 0 0 0.11 0.23 3 NA 0 NA NA NA 6 4 4 27.82 27.19 68.36 0 2 3 Whitelist LINC-JP 0.54 0.47 NA 0 0.48 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 4 0.06 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX18 X NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX18 LINC 0.72 1.96 Liver-HCC NA 0 0 NA 2 LINC-JP DO45051 HX18 female deceased no treatment 57 812 812 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 26.71 LINC-JP::HX20 1 57846243 247546039 1 4 11 2 0 0 0 2 0.11 0 5 0 0 5 3 3 6 3 3 29.71 89.89 7.08 0 2 0 Whitelist LINC-JP 0.54 0.01 0 0 0.48 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 6 0.27 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 2 NA NA 0 0 11 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist LINC-JP NA 0.18 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 4 NA NA 0 0 11 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 5 118568006 121076883 1 1 11 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA 6 5 5 29.71 28.61 71.25 0 1 2 Whitelist LINC-JP 0.62 0.35 NA NA 0.59 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 2 0.09 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 12 NA NA 0 0 11 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.66 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 13 NA NA 0 0 11 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.57 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 14 NA NA 0 0 11 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.54 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 21 NA NA 0 0 11 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.32 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX20 X NA NA 0 0 11 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.68 NA NA NA 0 No LINC-JP HX20 LINC 0.74 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45055 HX20 female alive no treatment 60 2991 2991 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 98.39 LINC-JP::HX21 1 27146533 244680299 1 2 133 0 2 0 0 0 0.11 0.1 8 0 0 8 3 4 8 3 4 32.46 55.44 41.6 0 3 2 Whitelist LINC-JP 0.54 0.27 0 0 0.48 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 2 85617303 85732773 1 1 133 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA NA NA NA 32.46 0.05 99.86 0 2 3 Whitelist LINC-JP 0.62 0.18 0 NA 0.59 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 3 182689538 187733342 1 2 133 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 5 3 5 32.46 99.81 0.05 0 1 2 Whitelist LINC-JP 0.68 0.04 NA 0 0.64 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 4 127254112 189277137 1 2 133 1 1 0 0 0 0.57 0.39 3 0 0 NA NA NA NA NA NA 32.46 14.11 85.53 0 2 1 Whitelist LINC-JP 0.68 0.63 0 0 0.64 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 5 NA NA 0 0 133 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.08 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 6 35828390 35908650 1 1 133 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 32.46 0.2 99.66 0 2 NA Whitelist LINC-JP 0.62 0.1 NA NA 0.59 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 7 49889679 148113504 1 4 133 3 0 1 0 0 0.11 0.85 1 0 0 NA NA NA NA NA NA 32.46 0 99.78 0 2 NA Whitelist LINC-JP 0.54 0.98 0 0 0.48 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 8 53518261 139231447 52 53 133 13 14 14 11 1 0.93 0 89 0 0 89 5 12 91 5 5 32.46 89.4 10.6 0 3 6 Whitelist LINC-JP 0.93 0 0 0 0.95 0 Low confidence LINC-JP HX21 LINC 0.61 1.81 Liver-HCC With other complex events 105 0.39 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 9 NA NA 0 0 133 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 10 2711528 3823830 1 2 133 2 0 0 0 0 0.11 0.53 4 0 0 4 4 4 7 5 5 32.46 2.01 97.88 0 1 2 Whitelist LINC-JP 0.54 0.76 0 0 0.48 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 11 NA NA 0 0 133 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 0 NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 12 NA NA 0 0 133 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.26 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 13 NA NA 0 0 133 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 14 NA NA 0 0 133 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.95 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 15 NA NA 0 0 133 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.52 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 16 NA NA 0 0 133 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.81 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 17 1895643 53649106 1 3 133 1 2 0 0 0 0.3 0.79 6 0 0 6 3 5 7 3 5 32.46 25.65 74.31 0 2 3 Whitelist LINC-JP 0.62 0.94 0 0 0.59 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 18 NA NA 0 0 133 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.52 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 19 19390770 20265982 3 3 133 1 1 1 0 0 0.8 0 5 0 0 5 4 5 9 5 5 32.46 31.39 68.43 0 2 4 Whitelist LINC-JP 0.87 0 0 0 0.84 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 20 8484787 8676584 1 1 133 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 32.46 0.3 98.73 0 1 2 Whitelist LINC-JP 0.62 0.77 NA NA 0.59 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 21 20690896 20707346 1 1 133 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 32.46 7.1 70.25 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 22 31775929 31801834 2 2 133 1 1 0 0 0 0.57 0.67 1 NA 0 NA NA NA NA NA NA 32.46 0 100 0 2 NA Whitelist LINC-JP 0.68 0.88 NA 0 0.64 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX21 X NA NA 0 0 133 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.21 NA NA NA 0 No LINC-JP HX21 LINC 0.61 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577581_G_A,CN:1 2 LINC-JP DO45057 HX21 male deceased no treatment 65 3100 3100 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 101.97 LINC-JP::HX22 1 NA NA 0 0 38 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LINC-JP NA 0.77 NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 2 NA NA 0 0 38 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LINC-JP NA 0.93 NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 3 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 4 57890570 64824984 2 2 38 0 1 1 0 0 0.57 0.04 2 0 0 NA NA NA 8 4 4 27.75 66 33.99 0 1 2 Whitelist LINC-JP 0.68 0.14 0 0 0.64 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 5 176255593 176843578 1 1 38 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 27.75 2.14 95.19 0 1 2 Whitelist LINC-JP 0.62 0.91 NA NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 6 36789153 71734026 1 7 38 1 3 0 1 2 0.28 0 13 0 0 13 7 7 15 8 8 27.75 99.85 0 0 3 1 Whitelist LINC-JP 0.62 0.01 0 0 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 12 0.16 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 7 NA NA 0 0 38 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.34 NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 8 47541564 53399463 1 2 38 0 0 1 0 1 0.39 0.04 3 0 NA NA NA NA 7 4 4 27.75 63.91 35.98 0 2 3 Whitelist LINC-JP 0.68 0.14 0 NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 3 0.04 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 9 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 10 113801248 114177183 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.75 0.28 99.54 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 11 1395283 57582635 2 2 38 0 0 1 1 0 0.57 0.1 4 0.01 0.04 4 4 4 5 5 5 27.75 0.84 98.73 0 2 3 Whitelist LINC-JP 0.68 0.26 0.01 0.04 0.64 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 4 0.05 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 12 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 13 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 15 52046265 52649902 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.75 0.59 83.85 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 16 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 17 7801058 79311663 3 6 38 2 0 0 1 3 0.3 0 7 0 0 7 5 7 11 6 6 27.75 23.27 76.73 0 2 3 Whitelist LINC-JP 0.68 0 0 0 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 9 0.12 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 18 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 19 33494965 34083579 1 5 38 0 1 0 0 4 0.39 0 3 0 0 NA NA NA 4 0 3 27.75 0.97 98.86 0 2 3 Whitelist LINC-JP 11_17 0.93 0.01 0 0 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 6 0.08 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 21 44878541 45557956 1 1 38 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 27.75 1.41 75.94 0 2 3 Whitelist LINC-JP 0.62 0.63 NA NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 0 0 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX22 X 132808141 133468339 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.75 0 99.77 0 2 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX22 LINC 0.82 1.91 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45059 HX22 female alive chemotherapy unknown 49 4935 4935 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 162.34 LINC-JP::HX23 1 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 2 14033038 198253449 2 4 48 0 0 1 1 2 0.57 1 1 0 0 NA NA NA NA NA NA 31.87 0 99.91 0 2 NA Whitelist LINC-JP 0.62 1 0 0 0.64 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 6 0.06 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 3 100645923 169488405 8 13 48 2 2 2 2 5 1 0 1 0 0 NA NA NA NA NA NA 31.87 0 99.95 0 2 NA Whitelist LINC-JP 0.68 0 0 0 1 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 21 0.22 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 4 34122730 185409681 1 5 48 3 1 0 0 1 0.11 0.01 4 0 0 4 3 4 4 3 3 31.87 70.37 29.4 0 1 0 Whitelist LINC-JP 0.45 0.06 0 0 0.48 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 9 0.09 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 5 23148363 24892476 1 1 48 1 0 0 0 0 0.39 0.23 2 0.04 NA NA NA NA NA NA NA 31.87 0.96 98.9 0 1 2 Whitelist LINC-JP 0.62 0.46 0.04 NA 0.59 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 6 29753890 142976587 1 2 48 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 31.87 99.74 0.12 0 1 3 Whitelist LINC-JP 0.54 1 NA 0 0.48 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 4 0.04 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 7 145877960 154544153 7 7 48 3 1 1 2 0 0.67 0 13 0 0 13 13 13 15 15 15 31.87 19.89 79.88 0 2 1 Whitelist LINC-JP 0.77 0.01 0 0 0.74 1 High confidence LINC-JP HX23 LINC 0.67 1.82 Liver-HCC Canonical without polyploidization 14 0.15 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 8 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 9 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 10 1609170 27595899 1 4 48 2 0 1 1 0 0.57 0.28 8 0.21 0 8 5 8 9 5 5 31.87 1.58 98.24 0 2 1 Whitelist LINC-JP 0.68 0.53 0.22 0 0.64 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 8 0.08 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 12 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 13 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 14 54582812 98611429 1 2 48 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 5 5 31.87 0.17 99.83 0 1 2 Whitelist LINC-JP 0.54 0.87 NA 0 0.48 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 4 0.04 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 15 37029890 37817175 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.87 0.77 99.23 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 16 5576785 5737911 1 2 48 0 0 0 1 1 0.39 0.04 1 NA NA NA NA NA NA NA NA 31.87 99.89 0 0 1 NA Whitelist LINC-JP 0.68 0.14 NA NA 0.59 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 3 0.03 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 17 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 18 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 19 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 20 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 21 NA NA 0 0 48 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.3 NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 22 28958372 28989241 1 1 48 0 0 1 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 31.87 0.12 99.88 0 1 2 Whitelist LINC-JP 0.62 0.69 NA NA 0.59 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX23 X NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX23 LINC 0.67 1.82 Liver-HCC NA 0 0 NA 2 LINC-JP DO45061 HX23 male deceased chemotherapy unknown 53 3275 3275 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 107.73 LINC-JP::HX24 1 NA NA 0 0 15 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LINC-JP NA 0.58 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 2 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 4 22353656 102224419 1 2 15 2 0 0 0 0 0.11 0.27 4 NA 0 4 3 4 5 3 5 48.9 99.86 0.13 0 3 1 Whitelist LINC-JP 0.54 0.51 NA 0 0.48 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 4 0.13 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 6 63489297 162194473 1 3 15 1 0 0 0 2 0.39 0.01 3 0.11 0 NA NA NA 4 3 3 48.9 68.06 29 0 2 1 Whitelist LINC-JP 0.62 0.05 0.11 0 0.59 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 4 0.13 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 7 NA NA 0 0 15 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.79 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 8 NA NA 0 0 15 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.77 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 9 NA NA 0 0 15 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.7 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 10 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.75 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 11 NA NA 0 0 15 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.36 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 14 NA NA 0 0 15 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.63 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 16 NA NA 0 0 15 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.59 NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 17 79357480 79399555 1 1 15 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 4 3 4 48.9 95.57 0 0 0 3 Whitelist LINC-JP 0.62 0.59 NA NA 0.59 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 2 0.07 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 22 50535604 50649956 1 1 15 0 1 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 48.9 0.22 98.5 0 3 NA Whitelist LINC-JP 0.62 0.37 NA NA 0.59 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 2 0.07 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX24 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX24 LINC 0.84 2.32 Liver-HCC NA 0 0 NA 2 LINC-JP DO45064 HX24 male deceased no treatment 66 3064 3064 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 100.79 LINC-JP::HX25 1 NA NA 0 0 111 0 0 0 0 0 NA 0.48 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.72 0 NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 2 NA NA 0 0 111 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.04 NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 3 61097144 61124863 1 1 111 1 0 0 0 0 0.39 0.45 2 0 NA NA NA NA NA NA NA 36.43 0.01 99.85 0 1 2 Whitelist LINC-JP 0.62 0.7 0 NA 0.59 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 4 142297629 142542356 1 1 111 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA 4 4 4 36.43 72.18 25.46 0 1 NA Whitelist LINC-JP 0.62 0.31 NA NA 0.59 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 5 29249343 44428121 15 15 111 3 4 4 4 0 0.98 0 18 0 0 18 6 8 52 9 10 36.43 24.09 75.78 0 4 6 Whitelist LINC-JP 0.99 0 0 0 0.99 0 Low confidence LINC-JP HX25 LINC 0.77 1.73 Liver-HCC With other complex events 30 0.14 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 6 NA NA 0 0 111 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.37 NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 7 NA NA 0 0 111 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.33 NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 8 39772710 58568053 1 9 111 1 0 3 3 2 0.28 0 12 0 0 12 5 5 14 5 5 36.43 98.76 1.23 1 3 2 Whitelist LINC-JP 10 0.62 0.02 0 0 0.59 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 16 0.07 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 9 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 10 47003735 108562347 3 4 111 0 0 2 1 1 0.3 0.17 6 0 0 6 6 6 15 8 8 36.43 65.12 34.7 1 1 2 Whitelist LINC-JP 0.62 0.39 0 0 0.59 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 7 0.03 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 11 69356774 69620015 4 5 111 1 1 1 1 1 1 0.04 4 0 0 4 3 4 7 3 3 36.43 99.44 0 0 25 24 Whitelist LINC-JP 0.93 0.14 0 0 1 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 9 0.04 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 12 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 13 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 14 24434057 26416280 1 1 111 0 1 0 0 0 0.39 0.27 3 NA NA NA NA NA 4 4 4 36.43 75.93 8.16 0 1 2 Whitelist LINC-JP 0.62 0.51 NA NA 0.59 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 15 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 16 NA NA 0 0 111 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.77 NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 17 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 18 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 19 19448037 22206921 21 23 111 6 5 4 6 2 0.91 0 14 0 0 14 3 6 19 5 6 36.43 99.46 0.36 0 1 3 Whitelist LINC-JP 1 0 0 0 0.94 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 44 0.2 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 20 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 21 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 22 24917638 38726918 2 2 111 0 0 1 1 0 0.57 0.38 5 NA 0 5 4 5 7 5 5 36.43 27.03 49.19 0 3 4 Whitelist LINC-JP 0.68 0.63 NA 0 0.64 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 4 0.02 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX25 X NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX25 LINC 0.77 1.73 Liver-HCC NA 0 0 frameshift_deletion,17_7578197_-_C,CN:1 2 LINC-JP DO45065 HX25 male deceased no treatment 41 740 740 Smoking history not documented NA no None Included Liver-HCC LINC JP 1 24.34 LINC-JP::HX26 1 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 2 208432905 208809559 1 1 29 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 35.77 0.15 99.74 0 2 3 Whitelist LINC-JP 0.62 0.75 NA NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 3 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 5 NA NA 0 0 29 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LINC-JP NA 0.01 0 NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 6 64029620 64282865 1 5 29 1 1 0 0 3 0.57 0 2 0 0 NA NA NA 4 3 4 35.77 37.53 62.32 0 2 4 Whitelist LINC-JP 0.62 0.01 0 0 0.64 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 7 0.12 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 7 30684296 31115828 1 2 29 0 1 0 0 1 0.39 0.07 2 0 NA NA NA NA 5 3 3 35.77 99.77 0 0 3 7 Whitelist LINC-JP 0.54 0.2 0 NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 3 0.05 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 8 18905925 41384107 1 1 29 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 35.77 99.69 0 0 1 3 Whitelist LINC-JP 0.62 0.87 NA NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 10 131328961 131384331 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 35.77 0.04 99.78 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 11 50095583 50301415 1 1 29 0 0 1 0 0 0.39 0.39 1 NA 0 NA NA NA NA NA NA 35.77 0 99.57 0 2 NA Whitelist LINC-JP 0.62 0.64 NA 0 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 12 46124738 46270357 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 35.77 0.11 99.81 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 14 65116957 65406314 1 1 29 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 35.77 0.27 98.82 0 2 3 Whitelist LINC-JP 0.62 0.47 NA NA 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 2 0.03 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 15 NA NA 0 0 29 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.78 NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 16 48034432 48548039 1 3 29 0 1 0 0 2 0.39 0.01 1 NA 0 NA NA NA NA NA NA 35.77 0 99.89 0 2 NA Whitelist LINC-JP 0.62 0.04 NA 0 0.59 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 4 0.07 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 19 4118039 53952500 1 3 29 1 1 0 0 1 0.57 0.02 2 NA 0.01 NA NA NA NA NA NA 35.77 99.83 0 0 3 5 Whitelist LINC-JP 0.87 0.08 NA 0.01 0.64 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 5 0.09 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 22 NA NA 0 0 29 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.54 NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX26 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX26 LINC 0.93 2.29 Liver-HCC NA 0 0 NA 2 LINC-JP DO45067 HX26 male alive no treatment 66 4097 4097 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 134.77 LINC-JP::HX27 1 8331843 8389865 1 1 27 0 1 0 0 0 0.39 0.16 2 0.05 NA NA NA NA 4 4 4 10.5 34.23 65.76 0 2 3 Whitelist LINC-JP 0.62 0.36 0.05 NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 3 78783740 79007844 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.5 0.11 99.84 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 4 100309546 100364638 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.5 0.03 99.74 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 6 157224659 157523578 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.5 0.17 99.66 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 7 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 8 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 9 104088566 137150731 2 2 27 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 10 3 4 10.5 0.4 96.52 0 2 3 Whitelist LINC-JP 0.68 0.02 0 0 0.64 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 4 0.07 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 10 98003422 98070110 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.5 0.05 99.77 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 12 122278812 122462626 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.5 0.14 99.78 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 13 38574322 86263082 1 2 27 2 0 0 0 0 0.11 0.06 2 0.05 0 NA NA NA NA NA NA 10.5 41.41 58.59 0 1 2 Whitelist LINC-JP 0.54 0.2 0.05 0 0.48 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 4 0.07 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 14 NA NA 0 0 27 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.43 NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 16 68010935 68048085 1 1 27 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 10.5 0.04 99.86 0 2 3 Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 18 NA NA 0 0 27 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.37 NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 19 1063586 16393358 1 2 27 0 2 0 0 0 0.11 0.1 3 NA 0.04 NA NA NA NA NA NA 10.5 0.09 99.39 0 2 3 Whitelist LINC-JP 0.54 0.26 NA 0.04 0.48 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 4 0.07 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 20 14946316 15001904 1 2 27 0 0 1 1 0 0.57 0.11 1 NA 0 NA NA NA NA NA NA 10.5 0 99.03 0 2 NA Whitelist LINC-JP 0.68 0.29 NA 0 0.64 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 4 0.07 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 0 0 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX27 X 2201355 2296990 1 1 27 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 10.5 100 0 0 1 NA Whitelist LINC-JP 0.62 0.64 NA NA 0.59 0 No LINC-JP HX27 LINC 0.89 1.93 Liver-HCC NA 2 0.04 NA 2 LINC-JP DO45069 HX27 male alive no treatment 58 1137 1137 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 37.4 LINC-JP::HX28 1 196470863 226612961 4 10 160 1 0 2 1 6 0.57 0 11 0 0 11 11 11 40 14 14 83.37 99.98 0.02 0 4 5 Whitelist LINC-JP 2 0.96 0.02 0 0 0.64 1 High confidence LINC-JP HX28 LINC 0.65 3.46 Liver-HCC After polyploidization 14 0.04 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 2 3659186 184750659 8 15 160 3 0 4 1 7 0.17 0.04 26 0 0 26 15 26 29 15 15 83.37 95.99 3.91 0 3 4 Whitelist LINC-JP 1 0.85 0.15 0 0 0.59 1 High confidence LINC-JP HX28 LINC 0.65 3.46 Liver-HCC With other complex events 23 0.07 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 3 81322269 81368442 1 3 160 0 1 0 0 2 0.39 0.44 2 0 0 NA NA NA 7 5 7 83.37 99.85 0 0 3 5 Whitelist LINC-JP 0.62 0.69 0 0 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 4 106905232 165763983 11 11 160 4 3 2 2 0 0.8 0.04 12 0 0 12 7 7 19 7 11 83.37 15.01 84.98 0 2 3 Whitelist LINC-JP 0.87 0.13 0 0 0.84 1 High confidence LINC-JP HX28 LINC 0.65 3.46 Liver-HCC With other complex events 22 0.07 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 5 107159735 141290931 1 4 160 1 0 1 1 1 0.8 0.41 6 0 0 6 5 6 7 5 7 83.37 99.87 0.01 0 4 2 Whitelist LINC-JP 0.68 0.66 0 0 0.84 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 7 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 6 63623695 135334641 6 14 160 1 3 1 1 8 0.57 0 12 0 0 12 4 5 25 5 6 83.37 97.16 0 0 3 4 Whitelist LINC-JP 0.62 0 0 0 0.64 1 Low confidence LINC-JP HX28 LINC 0.65 3.46 Liver-HCC With other complex events 20 0.06 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 7 NA NA 0 0 160 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LINC-JP NA 0.01 NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 8 10229821 35316426 1 2 160 0 1 0 0 1 0.39 0.72 5 0 NA 5 4 5 14 9 9 83.37 98.74 0.78 0 3 4 Whitelist LINC-JP 0.54 0.9 0 NA 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 3 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 9 17506919 139820281 1 4 160 0 1 1 1 1 0.8 0.54 5 0.06 0 5 4 5 5 4 4 83.37 78.76 18.16 0 2 3 Whitelist LINC-JP 0.68 0.77 0.06 0 0.84 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 7 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 10 3851599 3880221 4 5 160 1 1 2 0 1 0.57 0 4 0 0 4 4 4 13 6 7 83.37 95.19 1.39 0 3 4 Whitelist LINC-JP 0.68 0.01 0 0 0.64 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 9 0.03 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 11 85241093 85713441 1 1 160 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA 4 0 3 83.37 99.57 0 0 3 NA Whitelist LINC-JP 0.62 0.13 NA NA 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 12 76380376 76429542 1 1 160 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 6 6 83.37 97.45 2.47 0 2 3 Whitelist LINC-JP 0.62 1 0 NA 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 13 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 14 NA NA 0 0 160 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.2 NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 15 86061659 86202400 1 1 160 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 83.37 99.91 0 0 4 5 Whitelist LINC-JP 0.62 0.34 NA NA 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 16 NA NA 0 0 160 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LINC-JP NA 0.7 NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 17 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 18 20196951 24073824 1 3 160 2 0 0 1 0 0.3 0.62 7 0 0 7 7 7 10 8 9 83.37 30.85 69.14 0 4 3 Whitelist LINC-JP 0.62 0.84 0 0 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 19 17194882 19303846 1 1 160 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 4 5 83.37 36.27 63.54 0 2 4 Whitelist LINC-JP 0.62 1 NA NA 0.59 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 20 371884 427175 1 2 160 0 1 1 0 0 0.57 0.78 3 NA 0 NA NA NA 5 0 0 83.37 99.78 0 0 4 6 Whitelist LINC-JP 0.68 0.94 NA 0 0.64 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 21 NA NA 0 0 160 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 22 28619906 30056069 3 4 160 0 3 0 0 1 0.03 0 3 0 0 NA NA NA 4 0 3 83.37 100 0 0 4 5 Whitelist LINC-JP 0.54 0 0 0 0.33 1 No LINC-JP HX28 LINC 0.65 3.46 Liver-HCC NA 7 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX28 X 10674156 36219064 7 7 160 1 1 3 2 0 0.67 0 9 0 0 9 9 9 24 14 24 83.37 61.14 35.71 0 2 1 Whitelist LINC-JP 0.77 0 0 0 0.74 1 High confidence LINC-JP HX28 LINC 0.65 3.46 Liver-HCC Canonical without polyploidization 14 0.04 nonsynonymous_SNV,17_7578266_A_T,CN:2 3 LINC-JP DO45071 HX28 male alive no treatment 58 1679 1679 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Liver-HCC LINC JP 1 55.23 LINC-JP::HX29 1 90370962 247044305 1 2 7 1 0 0 1 0 0.57 0.1 7 NA 0 7 5 6 8 5 6 16.91 41.88 58.12 0 1 3 Whitelist LINC-JP 0.68 0.26 NA 0 0.64 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 4 0.29 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 2 NA NA 0 0 7 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.7 NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 3 69949761 69985369 1 1 7 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 16.91 0 99.83 0 2 NA Whitelist LINC-JP 0.62 0.64 NA NA 0.59 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 2 0.14 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 9 21860965 21987652 1 1 7 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 16.91 0.09 99.21 0 1 2 Whitelist LINC-JP 0.62 0.48 NA NA 0.59 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 2 0.14 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 18 72241729 72615792 1 1 7 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 16.91 0.48 99.49 0 1 2 Whitelist LINC-JP 0.62 0.39 NA NA 0.59 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 2 0.14 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 19 NA NA 0 0 7 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.32 NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX29 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX29 LINC 0.82 2.02 Liver-HCC NA 0 0 NA 2 LINC-JP DO45073 HX29 male deceased no treatment 50 5378 5378 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 176.91 LINC-JP::HX30 1 6254664 6264749 1 1 32 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.93 0 100 0 2 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 2 35340326 35352261 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 26.93 50.69 49.21 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 4 154822522 154865838 1 1 32 1 0 0 0 0 0.39 0.47 1 0 NA NA NA NA NA NA NA 26.93 0 99.78 0 2 NA Whitelist LINC-JP 0.62 0.72 0 NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 5 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.9 NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 6 44437647 51474851 2 5 32 0 1 1 0 3 0.57 0 3 0 0 NA NA NA 4 4 4 26.93 69.86 29.99 0 1 2 Whitelist LINC-JP 0.93 0.01 0 0 0.64 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 7 0.11 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 7 103406510 103427990 1 1 32 1 0 0 0 0 0.39 0.09 1 0 NA NA NA NA NA NA NA 26.93 58.62 41.16 0 3 NA Whitelist LINC-JP 0.62 0.25 0 NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 8 112005863 112092328 1 1 32 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 26.93 0.06 99.8 0 2 3 Whitelist LINC-JP 0.62 0.88 NA NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 9 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 10 56086415 114883292 1 4 32 1 0 1 1 1 0.8 0.06 1 0 0 NA NA NA NA NA NA 26.93 0 99.82 0 2 NA Whitelist LINC-JP 0.68 0.18 0 0 0.84 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 7 0.11 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 11 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 12 95962002 96103709 1 1 32 0 0 0 1 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 26.93 0.1 99.81 0 2 3 Whitelist LINC-JP 0.62 0.87 NA NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 13 24069241 61749239 1 2 32 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA NA NA NA 26.93 32.52 67.48 0 2 1 Whitelist LINC-JP 0.68 0.09 0 0 0.64 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 14 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 15 47899915 47948527 1 1 32 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 26.93 0.05 99.82 0 1 2 Whitelist LINC-JP 0.62 0.81 NA NA 0.59 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 17 36999937 37033370 1 2 32 0 1 0 1 0 0.57 0.05 4 NA 0 4 0 3 5 0 3 26.93 22.1 77.87 0 2 3 Whitelist LINC-JP 0.68 0.17 NA 0 0.64 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 22 NA NA 0 0 32 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.57 NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX30 X NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX30 LINC 0.47 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LINC-JP DO45075 HX30 male alive no treatment 66 3683 3683 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 121.15 LINC-JP::HX31 1 NA NA 0 0 56 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.57 NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 2 20587182 122250427 1 2 56 1 1 0 0 0 0.57 0.63 4 0.15 0 4 3 4 5 3 3 77.11 99.85 0.06 0 4 2 Whitelist LINC-JP 0.68 0.84 0.16 0 0.64 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 4 0.04 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 3 23563321 110708528 1 3 56 3 0 0 0 0 0.03 1 4 0.03 0 4 4 4 5 5 5 77.11 99.81 0 0 3 4 Whitelist LINC-JP 0.41 1 0.03 0 0.33 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 6 0.05 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 4 19655354 80132273 4 4 56 2 1 1 0 0 0.57 0.27 11 0 0 11 5 11 13 5 5 77.11 37.46 62.53 5 4 2 Whitelist LINC-JP 0.68 0.52 0 0 0.64 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 8 0.07 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 5 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 6 1847521 2079290 1 1 56 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 77.11 99.82 0 0 3 4 Whitelist LINC-JP 0.62 0.5 NA NA 0.59 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 2 0.02 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 7 2272495 111821396 1 2 56 2 0 0 0 0 0.11 1 4 0.46 0.08 4 4 4 5 5 5 77.11 99.66 0.11 0 2 4 Whitelist LINC-JP 0.54 1 0.46 0.08 0.48 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 4 0.04 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 8 126274520 126491019 1 3 56 0 1 1 0 1 0.57 0 4 0 0 4 3 4 9 4 5 77.11 67.14 29.31 0 10 6 Whitelist LINC-JP 0.87 0.01 0 0 0.64 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 5 0.04 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 9 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 10 12498155 96689199 1 7 56 1 1 0 0 5 0.57 0 4 0.01 0 4 3 4 5 3 3 77.11 99.78 0 0 4 3 Whitelist LINC-JP 0.77 0.02 0.01 0 0.64 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 9 0.08 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 11 60016268 68094196 2 2 56 0 0 2 0 0 0.11 0.33 5 0 0 5 5 5 13 8 8 77.11 91.16 4.89 6 2 5 Whitelist LINC-JP 0.54 0.58 0 0 0.48 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 4 0.04 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 12 23802102 24577283 1 1 56 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 77.11 99.92 0 0 3 4 Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 2 0.02 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 13 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 14 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 15 NA NA 0 0 56 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.87 NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 16 23228759 72656693 1 3 56 1 0 1 1 0 0.8 0.06 2 0 0 NA NA NA NA NA NA 77.11 99.57 0.33 0 2 4 Whitelist LINC-JP 0.87 0.19 0 0 0.84 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 6 0.05 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 17 28644164 31064363 3 4 56 1 2 0 0 1 0.3 0 12 0 0 12 5 8 21 5 8 77.11 77.17 18.28 0 8 6 Whitelist LINC-JP 0.54 0 0 0 0.59 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 7 0.06 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 18 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 19 29120487 30187651 2 2 56 1 0 1 0 0 0.57 0 3 0 0 NA NA NA 15 3 3 77.11 55.99 36.73 0 7 5 Whitelist LINC-JP 0.68 0 0 0 0.64 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 4 0.04 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 20 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX31 X NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX31 LINC 0.78 3.7 Liver-HCC NA 0 0 NA 4 LINC-JP DO45077 HX31 male alive no treatment 66 5337 5337 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 175.56 LINC-JP::HX32 1 8099405 215842951 1 33 237 2 14 1 0 16 0 0 20 0 0 20 10 18 21 11 11 13.36 0.44 99.55 0 2 3 Whitelist LINC-JP 15_5 0.01 0 0 0 0 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 50 0.11 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 2 48452073 217017336 1 12 237 0 8 0 0 4 0 0.73 15 0 0 15 11 13 20 13 15 13.36 1.05 98.85 0 2 3 Whitelist LINC-JP 0.09 0.9 0 0 0 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 20 0.04 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 3 52219056 172385281 2 6 237 1 1 1 1 2 1 0.7 8 0 0 8 4 7 15 5 10 13.36 0.64 99.22 0 2 3 Whitelist LINC-JP 0.93 0.9 0 0 1 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 10 0.02 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 4 15469299 185801573 1 10 237 1 5 0 0 4 0.01 0.36 12 0 0 12 4 12 16 5 5 13.36 45.85 54.05 0 2 3 Whitelist LINC-JP 1 0.24 0.62 0 0 0.19 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 16 0.03 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 5 919414 115180173 2 6 237 0 0 1 1 4 0.57 0 10 0 0 10 8 10 24 9 11 13.36 2.13 97.74 0 3 2 Whitelist LINC-JP 1_19 0.62 0.01 0 0 0.64 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 8 0.02 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 6 39229091 142605660 1 10 237 0 6 0 0 4 0 0.22 9 0 0 9 3 6 15 4 6 13.36 21.38 78.48 0 2 3 Whitelist LINC-JP 0.24 0.45 0 0 0.03 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 16 0.03 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 7 54864266 99385434 1 7 237 0 5 0 0 2 0 0.38 5 0 0 5 5 5 5 5 5 13.36 0.45 99.32 0 2 3 Whitelist LINC-JP 0.13 0.63 0 0 0.07 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 12 0.03 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 8 42069126 124062478 2 4 237 0 0 1 1 2 0.57 1 6 0 0 6 6 6 23 13 13 13.36 2.07 94.26 0 2 3 Whitelist LINC-JP 9 0.62 1 0 0 0.64 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 6 0.01 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 9 646762 139560367 1 20 237 2 9 0 0 9 0 0 17 0 0 17 8 11 18 8 8 13.36 1.78 97.7 0 2 3 Whitelist LINC-JP 5_8 0.41 0.01 0 0 0.02 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 31 0.07 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 10 11756364 29648077 2 3 237 0 0 1 1 1 0.57 0.21 3 0 0 NA NA NA 17 4 6 13.36 9.35 90.48 0 2 3 Whitelist LINC-JP 0.62 0.44 0 0 0.64 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 5 0.01 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 11 22664530 68826354 1 4 237 1 3 0 0 0 0.11 0.64 2 0 0 NA NA NA 7 5 5 13.36 3.77 95.81 0 1 2 Whitelist LINC-JP 0.54 0.85 0 0 0.48 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 8 0.02 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 12 26675019 122615814 1 14 237 2 7 0 0 5 0 0.02 9 0 0 9 4 5 12 4 7 13.36 51.86 48.06 0 3 2 Whitelist LINC-JP 9 0.21 0.08 0 0 0.08 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 23 0.05 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 13 NA NA 0 0 237 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.08 NA NA NA 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 0 0 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 14 69739084 70369853 2 4 237 0 2 0 0 2 0.11 0 5 0 0 5 3 5 17 5 5 13.36 1.5 97.59 0 3 2 Whitelist LINC-JP 0.54 0 0 0 0.48 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 6 0.01 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 15 58395795 90702522 1 6 237 0 4 0 0 2 0.01 0.55 6 0 0 6 6 6 7 7 7 13.36 0.1 99.72 0 2 3 Whitelist LINC-JP 1 0.54 0.78 0 0 0.16 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 10 0.02 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 16 1829525 72272795 1 7 237 0 4 1 0 2 0.04 0.31 8 0 0 8 4 8 10 4 4 13.36 20.64 79.26 0 2 3 Whitelist LINC-JP 0.47 0.56 0 0 0.36 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 12 0.03 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 17 27254521 80037545 1 8 237 0 6 0 0 2 0 0.01 3 0 0 NA NA NA 5 5 5 13.36 0.24 99.73 0 2 3 Whitelist LINC-JP 0.06 0.04 0 0 0.03 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 14 0.03 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 18 NA NA 0 0 237 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.27 NA NA NA 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 0 0 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 19 1285753 47756167 1 11 237 0 8 0 0 3 0 0.01 14 0 0 14 14 14 15 15 15 13.36 2.02 97.81 0 2 3 Whitelist LINC-JP 5 0.03 0.04 0 0 0 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 19 0.04 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 20 13979300 56131802 1 10 237 2 5 0 0 3 0.02 0.04 10 0 0 10 5 7 11 5 7 13.36 22.23 76.77 0 2 3 Whitelist LINC-JP 0.47 0.14 0 0 0.33 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 17 0.04 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 21 NA NA 0 0 237 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LINC-JP NA 0.93 NA NA NA 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 0 0 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 22 NA NA 0 0 237 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LINC-JP NA 0 0 NA NA 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 0 0 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX32 X 43644491 43701217 1 1 237 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 13.36 100 0 0 1 NA Whitelist LINC-JP 0.62 0 NA NA 0.59 0 No LINC-JP HX32 LINC 0.74 1.94 Liver-HCC NA 2 0 NA 3 LINC-JP DO45079 HX32 male alive chemotherapy unknown 59 5456 5456 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 179.47 LINC-JP::HX33 1 NA NA 0 0 42 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LINC-JP NA 0.5 NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 2 46355058 158155330 1 2 42 2 0 0 0 0 0.11 0.78 3 0 0 NA NA NA 6 4 4 84.62 98.65 1.26 0 4 5 Whitelist LINC-JP 0.54 0.93 0 0 0.48 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 4 0.05 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 3 119607880 119833165 3 3 42 3 0 0 0 0 0.03 0.07 4 0 0 4 0 3 7 3 3 84.62 99.77 0.07 0 0 1 Whitelist LINC-JP 0.41 0.21 0 0 0.33 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 6 0.07 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 4 88279377 88399704 1 1 42 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 84.62 99.76 0 0 3 5 Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 5 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 6 74295844 160865140 1 2 42 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 84.62 99.82 0.03 0 4 2 Whitelist LINC-JP 0.54 1 NA 0 0.48 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 4 0.05 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 7 626665 95007815 1 2 42 2 0 0 0 0 0.11 1 4 NA 0.04 4 3 4 5 3 5 84.62 99.57 0.21 0 3 1 Whitelist LINC-JP 0.54 1 NA 0.04 0.48 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 4 0.05 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 8 97265395 100360343 1 3 42 3 0 0 0 0 0.03 0.47 3 0 0 NA NA NA 4 4 4 84.62 99.99 0 0 5 4 Whitelist LINC-JP 0.41 0.72 0 0 0.33 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 6 0.07 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 9 21962426 22049341 1 1 42 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 84.62 99.29 0 0 3 NA Whitelist LINC-JP 0.62 0.88 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 10 58797139 85692869 1 3 42 1 1 1 0 0 0.8 0.44 5 0 0 5 3 5 5 3 3 84.62 99.82 0 0 3 1 Whitelist LINC-JP 0.87 0.69 0 0 0.84 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 6 0.07 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 11 93025491 115191117 1 2 42 2 0 0 0 0 0.11 0.45 4 0 0 4 3 4 5 3 5 84.62 99.36 0.09 0 3 1 Whitelist LINC-JP 0.54 0.69 0 0 0.48 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 4 0.05 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 12 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 13 90426772 90446226 2 2 42 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 7 4 4 84.62 45 55 0 4 5 Whitelist LINC-JP 0.68 0.06 0 0 0.64 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 4 0.05 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 16 89976 100586 1 1 42 1 0 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 84.62 0 99.62 0 2 NA Whitelist LINC-JP 0.62 0.56 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 17 2005667 2185583 1 1 42 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 84.62 96.82 3.18 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 18 18865927 19123382 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.62 99.98 0 0 3 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 20 1087140 1127909 1 1 42 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 84.62 99.07 0 0 3 4 Whitelist LINC-JP 0.62 0.81 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 21 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 0 0 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 22 33857849 34263403 1 1 42 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 84.62 99.21 0.79 0 2 4 Whitelist LINC-JP 0.62 0.64 NA NA 0.59 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 2 0.02 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX33 X 63298620 133049251 1 3 42 3 0 0 0 0 0.03 0.06 1 0 0 NA NA NA NA NA NA 84.62 0 100 0 2 NA Whitelist LINC-JP 0.41 0.18 0 0 0.33 0 No LINC-JP HX33 LINC 0.65 3.25 Liver-HCC NA 6 0.07 NA 3 LINC-JP DO45081 HX33 male deceased no treatment 63 904 904 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Liver-HCC LINC JP 1 29.74 LINC-JP::HX34 1 87301981 87324285 1 1 28 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 73.46 100 0 0 3 NA Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 2 63993203 204500089 1 3 28 1 1 0 1 0 0.8 0.29 7 0 0 7 5 7 7 5 5 73.46 62.48 37.41 0 3 2 Whitelist LINC-JP 0.87 0.54 0 0 0.84 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 6 0.11 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 3 144555957 145681088 1 1 28 0 0 1 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 73.46 99.87 0 0 5 NA Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 4 21086546 95807005 1 2 28 2 0 0 0 0 0.11 0.71 3 NA 0 NA NA NA NA NA NA 73.46 99.76 0 0 3 1 Whitelist LINC-JP 0.54 0.9 NA 0 0.48 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 5 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 6 65359875 67643653 1 1 28 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 73.46 36.82 60.35 0 2 5 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 7 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 10 100216400 100238537 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 73.46 99.82 0 0 3 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 11 89312550 89328473 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 73.46 0 99.57 0 2 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 12 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 13 34504690 65929547 1 5 28 2 1 0 1 1 0.57 0 3 0 0 NA NA NA NA NA NA 73.46 0.12 85.73 0 2 1 Whitelist LINC-JP 0.62 0 0 0 0.64 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 9 0.16 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 14 75395634 75453019 1 1 28 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 73.46 81.28 0 0 3 NA Whitelist LINC-JP 0.62 0.81 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 15 52098573 52446374 1 1 28 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 73.46 84.1 0.34 0 2 4 Whitelist LINC-JP 0.62 0.77 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 16 NA NA 0 0 28 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 17 77716789 80045358 1 2 28 0 2 0 0 0 0.11 0.17 2 NA 0 NA NA NA 4 3 3 73.46 68.22 27.33 0 5 7 Whitelist LINC-JP 0.54 0.39 NA 0 0.48 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 19 NA NA 0 0 28 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.68 NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 20 NA NA 0 0 28 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.7 NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 21 33545361 33583531 1 1 28 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 73.46 77.57 0.08 0 2 4 Whitelist LINC-JP 0.62 0.15 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX34 X 146643757 146659208 1 1 28 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 73.46 0.01 99.99 0 2 4 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX34 LINC 0.88 3.2 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LINC-JP DO45083 HX34 male alive no treatment 62 1653 1653 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 54.38 LINC-JP::HX35 1 150656376 166252691 11 16 135 3 2 1 5 5 0.36 0 17 0 0 17 3 3 33 5 8 83.4 100 0 0 18 15 Whitelist LINC-JP 14 0.79 0 0 0 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 27 0.1 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 2 NA NA 0 0 135 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.01 NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 3 124812369 133901356 2 2 135 0 0 1 1 0 0.57 0.5 1 0 0 NA NA NA 4 4 4 83.4 96.83 0 0 4 NA Whitelist LINC-JP 0.68 0.75 0 0 0.64 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 4 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 4 1056612 57295598 29 29 135 6 4 10 9 0 0.37 0 36 0 0 36 4 8 42 4 9 83.4 99.99 0 0 5 4 Whitelist LINC-JP 0.62 0 0 0 0.59 0 Low confidence LINC-JP HX35 LINC 0.75 3.67 Liver-HCC With other complex events 58 0.21 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 5 115933546 158315155 1 4 135 0 2 2 0 0 0.26 0.86 8 0 0 8 3 5 8 3 5 83.4 99.88 0 0 4 5 Whitelist LINC-JP 0.62 0.99 0 0 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 8 0.03 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 6 62660471 68176581 1 1 135 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 10 4 4 83.4 97.14 0 0 5 6 Whitelist LINC-JP 0.62 0.2 NA NA 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 2 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 7 144227448 144322119 1 1 135 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 6 3 3 83.4 99.72 0.06 0 2 4 Whitelist LINC-JP 0.62 0.17 NA NA 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 2 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 8 20578275 115564729 1 5 135 1 1 1 0 2 0.8 0.43 11 0 0 11 6 6 14 8 8 83.4 86.2 10.27 2 1 2 Whitelist LINC-JP 0.68 0.68 0 0 0.84 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 8 0.03 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 9 102253505 102352084 2 2 135 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 83.4 99.3 0 0 3 NA Whitelist LINC-JP 0.68 0.4 NA 0 0.64 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 4 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 10 9247938 124153624 1 3 135 1 0 0 1 1 0.57 0.3 11 NA 0.01 11 4 6 12 5 6 83.4 90.4 9.42 0 2 3 Whitelist LINC-JP 0.87 0.54 NA 0.01 0.64 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 5 0.02 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 11 56963272 58099343 1 5 135 0 0 0 1 4 0.39 0.3 4 0 0 4 4 4 9 6 7 83.4 46.89 52.55 0 4 5 Whitelist LINC-JP 17 0.93 0.55 0 0 0.59 0 Linked to low confidence LINC-JP HX35 LINC 0.75 3.67 Liver-HCC After polyploidization 6 0.02 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 12 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 13 48907432 50279080 1 1 135 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 3 83.4 100 0 0 0 3 Whitelist LINC-JP 0.62 0.26 NA NA 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 2 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 14 47854034 58293486 1 2 135 1 0 1 0 0 0.57 0.08 5 0 0 5 5 5 15 8 8 83.4 85 0 0 3 4 Whitelist LINC-JP 0.68 0.22 0 0 0.64 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 4 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 15 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 16 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 17 8507299 11666681 17 19 135 4 4 4 5 2 0.98 0 28 0 0 28 6 12 36 6 12 83.4 83.09 12.46 0 5 2 Whitelist LINC-JP 1 0 0 0 0.99 0 Low confidence LINC-JP HX35 LINC 0.75 3.67 Liver-HCC With other complex events 36 0.13 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 18 NA NA 0 0 135 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA 8 3 5 0 0 0 0 0 0 Whitelist LINC-JP NA 0.94 NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 19 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 20 NA NA 0 0 135 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 21 NA NA 0 0 135 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 22 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 0 0 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX35 X 82955222 82973282 1 1 135 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 83.4 1.75 98.25 0 2 3 Whitelist LINC-JP 0.62 0.07 NA NA 0.59 0 No LINC-JP HX35 LINC 0.75 3.67 Liver-HCC NA 2 0.01 NA 4 LINC-JP DO45085 HX35 male alive no treatment 68 603 603 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 19.84 LINC-JP::HX36 1 24839677 246081857 1 5 22 1 0 0 2 2 0.3 0 6 0 0 6 3 3 6 3 3 12.33 42.27 57.73 0 3 4 Whitelist LINC-JP 0.62 0.01 0 0 0.59 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 8 0.18 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 2 71496814 80317407 1 2 22 2 0 0 0 0 0.11 0.11 4 0 0 4 4 4 5 5 5 12.33 0.1 99.79 0 1 2 Whitelist LINC-JP 0.54 0.28 0 0 0.48 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 4 0.09 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 3 158044923 158090726 1 1 22 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.33 0 99.95 0 2 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 2 0.05 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 4 28769273 44073046 2 2 22 0 0 1 1 0 0.57 0.66 1 NA 0 NA NA NA NA NA NA 12.33 0 99.99 0 2 NA Whitelist LINC-JP 0.68 0.86 NA 0 0.64 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 4 0.09 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 5 133729032 133825804 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.33 0.05 99.81 0 2 3 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 2 0.05 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 7 7352005 146853493 1 2 22 1 1 0 0 0 0.57 0.33 2 NA 0 NA NA NA NA NA NA 12.33 60.87 36.41 0 2 3 Whitelist LINC-JP 0.68 0.58 NA 0 0.64 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 4 0.09 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 10 15678013 15699335 1 1 22 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 12.33 0.08 99.74 0 2 NA Whitelist LINC-JP 0.62 0.22 NA NA 0.59 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 2 0.05 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 14 45657265 76157291 1 2 22 2 0 0 0 0 0.11 0.15 3 NA 0 NA NA NA NA NA NA 12.33 0.07 99.02 0 2 1 Whitelist LINC-JP 0.54 0.35 NA 0 0.48 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 4 0.09 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 15 58469211 58533036 1 1 22 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 12.33 0 100 0 2 NA Whitelist LINC-JP 0.62 0.71 NA NA 0.59 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 2 0.05 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 17 NA NA 0 0 22 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.08 NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX36 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX36 LINC 0.78 2.1 Liver-HCC NA 0 0 NA 2 LINC-JP DO45087 HX36 male deceased no treatment 56 770 770 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Liver-HCC LINC JP 1 25.33 LINC-JP::HX37 1 27871602 186452652 1 6 78 3 0 0 0 3 0.03 0.4 9 0 0 9 5 9 9 5 5 66.24 99.68 0 0 4 3 Whitelist LINC-JP 0.54 0.64 0 0 0.33 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 9 0.06 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 2 NA NA 0 0 78 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 8 3 6 0 0 0 0 0 0 Whitelist LINC-JP NA 1 0 NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 3 178627757 178801541 1 1 78 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA 4 4 4 66.24 95.26 4.6 0 2 3 Whitelist LINC-JP 0.62 0.96 0 NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 4 17542342 17566219 1 1 78 1 0 0 0 0 0.39 0.82 2 NA NA NA NA NA 5 3 3 66.24 32.71 64.91 0 2 3 Whitelist LINC-JP 0.62 0.96 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 5 50271182 104288617 1 2 78 2 0 0 0 0 0.11 0.82 1 0 0 NA NA NA NA NA NA 66.24 99.88 0 0 4 NA Whitelist LINC-JP 0.54 0.96 0 0 0.48 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 6 25808565 25836202 1 1 78 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 4 6 66.24 39.5 57.63 0 4 5 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 7 NA NA 0 0 78 0 0 0 0 0 NA 0.61 NA 0.03 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.83 0.03 NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 8 1422816 43567139 4 6 78 1 2 0 1 2 0.57 0.02 7 0 0 7 7 7 11 9 11 66.24 68.18 28.39 0 4 2 Whitelist LINC-JP 0.93 0.07 0 0 0.64 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 10 0.06 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 9 122097064 122179246 1 1 78 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 66.24 99.23 0.06 0 2 3 Whitelist LINC-JP 0.62 0.63 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 10 6270643 48308207 5 6 78 0 1 2 2 1 0.53 0 11 0 0 11 5 5 19 6 6 66.24 8.38 91.42 0 5 2 Whitelist LINC-JP 0.62 0 0 0 0.64 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 11 0.07 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 11 88121040 104978063 1 2 78 2 0 0 0 0 0.11 0.41 2 0 0 NA NA NA NA NA NA 66.24 99.53 0.05 0 2 3 Whitelist LINC-JP 0.54 0.66 0 0 0.48 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 12 132444279 132514085 1 1 78 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 3 3 66.24 99.92 0 0 0 4 Whitelist LINC-JP 0.62 0.81 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 13 44392241 64441875 1 1 78 0 0 0 1 0 0.39 0.2 3 0 NA NA NA NA 7 4 7 66.24 100 0 0 3 1 Whitelist LINC-JP 0.62 0.42 0 NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 14 NA NA 0 0 78 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.76 NA NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 15 75672145 75847163 1 1 78 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA 5 4 4 66.24 79.73 15.41 0 3 4 Whitelist LINC-JP 0.62 0.72 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 16 NA NA 0 0 78 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.36 NA NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 17 NA NA 0 0 78 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.37 NA NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 18 12938740 23250251 1 3 78 0 0 1 0 2 0.39 0.06 2 0 0 NA NA NA NA NA NA 66.24 34.81 65.15 0 4 7 Whitelist LINC-JP 10 0.87 0.18 0 0 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 19 4922786 5132311 1 1 78 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 66.24 99.83 0 0 1 3 Whitelist LINC-JP 0.62 0 0 NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 20 39681791 39895454 1 1 78 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 66.24 99.03 0 0 3 4 Whitelist LINC-JP 0.62 0.47 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 22 25684350 25980486 1 1 78 1 0 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 66.24 0 100 0 2 NA Whitelist LINC-JP 0.62 0.82 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX37 X 128582388 128616317 1 1 78 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 6 6 66.24 15.69 84.31 0 1 2 Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX37 LINC 0.64 3.11 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_G_C,CN:2 4 LINC-JP DO45089 HX37 male alive no treatment 45 4010 4010 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Liver-HCC LINC JP 1 131.91 LINC-JP::HX4 1 178504908 178575096 1 1 47 0 0 1 0 0 0.39 0.42 2 0 NA NA NA NA 6 3 4 25.23 19.93 77.1 0 2 4 Whitelist LINC-JP 0.62 0.66 0 NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 2 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 3 26520901 183050216 1 3 47 1 2 0 0 0 0.3 1 3 0.07 0 NA NA NA NA NA NA 25.23 0.04 99.84 0 2 1 Whitelist LINC-JP 0.62 1 0.07 0 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 6 0.06 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 4 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 5 NA NA 0 0 47 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 0.77 NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 6 35356459 35428521 1 1 47 0 0 1 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 25.23 0 99.74 0 2 NA Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 7 15612633 15707644 1 1 47 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 25.23 0.06 99.88 0 1 2 Whitelist LINC-JP 0.62 0.76 NA NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 8 50698878 92102878 1 4 47 2 0 0 0 2 0.11 0.03 5 0 0 5 0 3 8 3 4 25.23 99.88 0 0 7 8 Whitelist LINC-JP 13 0.54 0.11 0 0 0.48 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 6 0.06 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 9 32571611 97853416 1 2 47 0 0 1 0 1 0.39 0.11 2 NA NA NA NA NA NA NA NA 25.23 66.37 33.39 0 2 4 Whitelist LINC-JP 0.68 0.29 NA NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 3 0.03 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 10 106822279 121496014 6 9 47 2 0 4 0 3 0.06 0 5 0 0 5 0 5 8 3 3 25.23 32.92 66.9 0 1 2 Whitelist LINC-JP 0.68 0 0 0 0.48 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 15 0.16 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 11 76445481 76627591 1 1 47 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 25.23 0.13 99.69 0 2 3 Whitelist LINC-JP 0.62 0.9 NA NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 12 NA NA 0 0 47 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LINC-JP NA 0.53 NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 13 26802106 95015494 1 7 47 2 0 0 0 5 0.11 0 6 0 0 6 6 6 9 8 8 25.23 19.54 66.3 0 1 2 Whitelist LINC-JP 0.77 0 0 0 0.48 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 9 0.1 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 14 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 15 76708900 92692480 1 2 47 1 1 0 0 0 0.57 0.38 1 NA 0 NA NA NA NA NA NA 25.23 0 84.46 0 2 NA Whitelist LINC-JP 0.68 0.63 NA 0 0.64 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 4 0.04 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 16 79163284 79181158 1 1 47 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.23 99.9 0 0 1 NA Whitelist LINC-JP 0.62 1 NA NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 17 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LINC-JP NA 1 NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 19 23575793 23598665 1 1 47 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 11 3 4 25.23 41.05 58.77 0 2 4 Whitelist LINC-JP 0.62 0.06 0 NA 0.59 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 2 0.02 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 20 14468379 14963443 1 2 47 2 0 0 0 0 0.11 0.27 1 NA 0 NA NA NA NA NA NA 25.23 0 99.87 0 2 NA Whitelist LINC-JP 0.54 0.51 NA 0 0.48 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 4 0.04 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LINC-JP::HX4 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LINC-JP NA NA NA NA NA 0 No LINC-JP HX4 LINC 0.53 2.17 Liver-HCC NA 0 0 NA 2 LINC-JP DO45029 HX4 female alive no treatment 73 2305 2305 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Liver-HCC LINC JP 1 75.82 LIRI-JP::RK001 1 100947953 119869386 2 2 49 0 0 1 1 0 0.57 0.79 1 0 0 NA NA NA 5 3 3 72.03 74.23 25.76 0 4 NA Whitelist LIRI-JP 0.68 0.94 0 0 0.64 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 2 160227698 169132551 1 2 49 2 0 0 0 0 0.11 1 4 0 0 4 3 4 5 3 5 72.03 99.88 0.02 0 3 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 3 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 4 NA NA 0 0 49 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 5 32165915 136254284 1 3 49 0 1 1 1 0 0.8 0.13 5 0 0 5 3 5 8 4 5 72.03 99.88 0 0 5 4 Whitelist LIRI-JP 0.87 0.32 0 0 0.84 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 6 63899641 64022385 1 1 49 1 0 0 0 0 0.39 0.77 3 NA NA NA NA NA 6 3 3 72.03 37.63 59.31 0 2 3 Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 7 NA NA 0 0 49 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 8 43017041 53295917 5 6 49 2 2 1 0 1 0.53 0 2 0 0 NA NA NA 9 3 3 72.03 76.62 23.38 0 4 6 Whitelist LIRI-JP 0.62 0 0 0 0.64 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 11 0.11 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 9 26135732 32519210 1 2 49 1 0 0 0 1 0.39 0.12 3 0 NA NA NA NA 10 4 6 72.03 78.96 18.46 0 4 3 Whitelist LIRI-JP 0.68 0.31 0 NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 3 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 10 9949910 30109453 1 2 49 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 72.03 99.81 0.01 0 3 2 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 11 132048237 132074305 1 1 49 0 0 0 1 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 72.03 99.57 0 0 4 5 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 12 NA NA 0 0 49 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 13 46020730 105927344 1 2 49 1 1 0 0 0 0.57 0.69 3 NA 0 NA NA NA 4 3 4 72.03 100 0 0 3 4 Whitelist LIRI-JP 0.68 0.89 NA 0 0.64 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 14 24543006 50272951 1 3 49 0 2 1 0 0 0.3 0.2 3 0 0 NA NA NA NA NA NA 72.03 0.39 98.73 0 2 3 Whitelist LIRI-JP 0.62 0.42 0 0 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 15 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 16 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 17 42200695 42212208 1 1 49 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 72.03 77.49 22.49 0 3 NA Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 18 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 19 NA NA 0 0 49 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.49 NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 20 15754836 15838558 1 1 49 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 4 72.03 99.01 0 0 4 6 Whitelist LIRI-JP 0.62 0.25 NA NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 21 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 22 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK001 X 36531148 36610928 1 1 49 0 1 0 0 0 0.39 0.31 2 0.1 NA NA NA NA 6 6 6 72.03 18.35 81.65 0 1 2 Whitelist LIRI-JP 0.62 0.56 0.1 NA 0.59 0 No LIRI-JP RK001 LIRI 0.68 3.27 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:2 3 LIRI-JP DO45091 RK001 male deceased C22 56 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK002 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 4 25368018 69216395 1 2 16 1 0 0 1 0 0.57 0.09 2 0 0 NA NA NA 4 0 0 29.66 63.8 36.19 0 2 4 Whitelist LIRI-JP 0.68 0.24 0 0 0.64 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 4 0.12 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 9 130896407 140144694 1 3 16 2 0 0 1 0 0.3 0.02 7 0 0 7 4 6 10 4 6 29.66 97.24 2.61 0 2 3 Whitelist LIRI-JP 0.62 0.09 0 0 0.59 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 6 0.19 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 13 21697406 21934949 1 1 16 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 4 3 3 29.66 82 14.49 0 1 NA Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 15 67178765 67239234 1 1 16 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 29.66 0.06 99.81 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 17 63550591 64472812 1 1 16 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 4 4 4 29.66 28.48 67.09 0 1 2 Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 19 15383550 19126636 1 4 16 1 0 0 1 2 0.57 0 5 0 0 5 5 5 9 6 6 29.66 37.79 54.93 0 2 1 Whitelist LIRI-JP 1 0 0 0 0.64 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 6 0.19 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK002 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK002 LIRI 0.68 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45092 RK002 male deceased C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK003 1 240018771 240119046 1 1 51 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 6 3 6 70 96.81 0.04 0 2 3 Whitelist LIRI-JP 0.62 0.95 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 2 NA NA 0 0 51 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 3 61080088 61256508 1 1 51 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 70 99.99 0 0 4 5 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 4 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 5 19611559 96088507 1 2 51 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 6 6 6 70 98.61 1.27 0 2 3 Whitelist LIRI-JP 0.54 0.93 NA 0 0.48 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 6 NA NA 0 0 51 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 7 20916058 121857758 1 3 51 2 1 0 0 0 0.3 0.75 10 0 0 10 3 7 11 3 7 70 97.45 0 0 5 3 Whitelist LIRI-JP 0.62 0.92 0 0 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 8 57075497 145572220 11 12 51 3 3 3 2 1 0.97 0 11 0 0 11 7 10 31 11 13 70 67.53 28.51 1 8 2 Whitelist LIRI-JP 0.93 0 0 0 0.98 1 High confidence LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC With other complex events 23 0.23 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 9 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 10 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 11 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 13 NA NA 0 0 51 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 14 55840167 72389895 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 70 64.63 19.46 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 15 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 16 178203 388258 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 70 2.91 92.57 0 0 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 17 35358262 80803775 10 10 51 1 3 3 3 0 0.75 0 24 0 0 24 5 5 28 5 5 70 57.29 36.94 0 7 3 Whitelist LIRI-JP 0.86 0 0 0 0.83 1 Low confidence LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC With other complex events 20 0.2 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 20 14995212 15169750 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 70 99.62 0 0 1 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK003 X 142224566 142302021 1 1 51 0 0 0 1 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 70 0.05 99.95 0 2 5 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 1 No LIRI-JP RK003 LIRI 0.54 3.3 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 LIRI-JP DO45093 RK003 male deceased C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK004 1 174432639 174736446 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 7.05 42.21 57.78 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 2 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 3 45574029 45677215 1 1 22 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 7.05 0.05 99.81 0 2 3 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 5 132078122 132175646 1 1 22 0 1 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 7.05 0.05 99.81 0 2 3 Whitelist LIRI-JP 0.62 0.36 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 6 NA NA 0 0 22 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 8 140894362 140945022 1 1 22 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 7.05 28.13 71.86 0 2 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 9 21964229 21989548 1 1 22 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 7.05 0 99.3 0 2 NA Whitelist LIRI-JP 0.62 0.17 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 12 74471688 74483327 1 1 22 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 7.05 0.01 99.91 0 1 2 Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 13 NA NA 0 0 22 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 14 83909305 84337041 2 2 22 0 0 1 1 0 0.57 0.15 2 NA 0 NA NA NA NA NA NA 7.05 0.01 99.07 0 2 3 Whitelist LIRI-JP 0.68 0.35 NA 0 0.64 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 15 NA NA 0 0 22 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 19 NA NA 0 0 22 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.61 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 20 NA NA 0 0 22 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.23 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK004 X NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK004 LIRI 0.71 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45094 RK004 male alive C22 76 1650 NA NA Included Liver-HCC LIRI JP 1 54.28 LIRI-JP::RK005 1 17321258 221324618 1 15 78 0 1 0 1 13 0.57 0 6 0 0 6 6 6 6 6 6 18.95 50.41 49.59 0 2 3 Whitelist LIRI-JP 0.62 0 0 0 0.64 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 17 0.11 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 2 NA NA 0 0 78 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 0 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 3 94087745 164317165 1 6 78 0 1 1 0 4 0.57 0.02 1 0 0 NA NA NA NA NA NA 18.95 0.04 99.8 0 2 NA Whitelist LIRI-JP 0.93 0.09 0 0 0.64 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 8 0.05 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 4 NA NA 0 0 78 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 0 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 5 NA NA 0 0 78 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 0 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 6 107188487 107307628 1 1 78 0 1 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 18.95 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.34 0 NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 7 NA NA 0 0 78 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 8 34093486 55606776 1 2 78 0 0 0 1 1 0.39 0.01 2 0 NA NA NA NA 7 5 5 18.95 99.99 0 0 4 7 Whitelist LIRI-JP 0.68 0.03 0 NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 3 0.02 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 9 NA NA 0 0 78 0 0 0 0 0 NA 0 NA 0.1 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.02 0.1 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 10 86397792 86410175 1 1 78 0 0 1 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 18.95 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.04 0 NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 11 NA NA 0 0 78 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.05 0 NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 12 24654832 24699098 1 1 78 0 1 0 0 0 0.39 0.18 1 0 NA NA NA NA NA NA NA 18.95 1.12 98.8 0 2 NA Whitelist LIRI-JP 0.62 0.4 0 NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 13 63721578 84741175 1 2 78 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 18.95 0.72 84.97 0 2 NA Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 14 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 15 42131596 42207430 1 1 78 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 18.95 0 84.59 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 16 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 17 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 18 20279830 20305798 1 1 78 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 18.95 0 95.35 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 19 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 20 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 22 17298304 17316467 1 1 78 0 0 0 1 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 18.95 0 76.22 0 2 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK005 X 104808489 104885518 1 1 78 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.95 0.05 99.95 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK005 LIRI 0.29 2.3 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45095 RK005 male alive C22 66 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK006 1 6250060 231784856 1 4 46 2 1 0 1 0 0.57 0.17 8 0 0 8 4 6 8 4 6 20.47 13.13 86.87 0 1 2 Whitelist LIRI-JP 0.68 0.39 0 0 0.64 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 8 0.09 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 2 77293234 78171801 2 2 46 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 20.47 0.1 99.8 0 2 NA Whitelist LIRI-JP 0.68 0.17 0 0 0.64 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 3 148792122 149059243 2 2 46 0 2 0 0 0 0.11 0.25 1 0 0 NA NA NA 5 3 3 20.47 10.9 89.05 0 2 NA Whitelist LIRI-JP 0.54 0.5 0 0 0.48 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 4 40370583 40423302 1 1 46 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 20.47 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 5 71531517 101073385 1 2 46 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 6 3 3 20.47 0.29 99.7 0 2 1 Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 6 NA NA 0 0 46 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 7 NA NA 0 0 46 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 8 17661679 121958517 1 5 46 0 3 0 1 1 0.11 0.03 1 0 0 NA NA NA NA NA NA 20.47 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.11 0 0 0.48 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 9 0.1 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 9 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 10 NA NA 0 0 46 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 11 69001234 69466517 5 5 46 1 2 1 1 0 0.9 0.02 1 0 0 NA NA NA NA NA NA 20.47 51.52 48.34 0 3 NA Whitelist LIRI-JP 0.93 0.08 0 0 0.92 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 10 0.11 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 12 105205663 116582182 1 2 46 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA 11 7 7 20.47 9.94 89.98 0 2 NA Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 14 70310096 70387181 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 20.47 0.39 99.61 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 17 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 18 686148 47267698 1 3 46 1 2 0 0 0 0.3 0.03 3 0 0 NA NA NA NA NA NA 20.47 0.42 99.49 0 2 4 Whitelist LIRI-JP 0.62 0.12 0 0 0.59 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 6 0.07 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 20 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK006 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK006 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45096 RK006 male deceased C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK007 1 228385443 238764043 2 2 32 0 0 1 1 0 0.57 0.74 4 0 0 4 4 4 6 5 6 27.44 41.89 58.1 0 1 3 Whitelist LIRI-JP 0.68 0.91 0 0 0.64 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 2 NA NA 0 0 32 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 3 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 4 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 5 5024521 169917117 1 4 32 3 1 0 0 0 0.11 0.05 3 0 0 NA NA NA NA NA NA 27.44 99.59 0.28 0 3 2 Whitelist LIRI-JP 0.54 0.16 0 0 0.48 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 8 0.12 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 6 63471673 170173059 1 4 32 2 0 0 0 2 0.11 0.12 4 0 0 4 3 4 5 3 4 27.44 99.32 0.53 0 3 1 Whitelist LIRI-JP 0.21 0.31 0 0 0.48 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 7 45734632 99433141 1 2 32 1 1 0 0 0 0.57 0.09 2 0 0 NA NA NA NA NA NA 27.44 99.77 0 0 3 4 Whitelist LIRI-JP 0.68 0.25 0 0 0.64 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 8 NA NA 0 0 32 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.22 0 NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 9 102862863 103135517 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.44 0.19 99.07 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 10 12922273 49926817 3 5 32 2 1 0 0 2 0.3 0.01 1 0 0 NA NA NA NA NA NA 27.44 0 99.91 0 2 NA Whitelist LIRI-JP 0.62 0.06 0 0 0.59 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 8 0.12 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 11 70393531 110061606 1 2 32 2 0 0 0 0 0.11 0.66 2 NA 0 NA NA NA NA NA NA 27.44 0.11 99.46 0 1 2 Whitelist LIRI-JP 0.54 0.87 NA 0 0.48 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 12 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 13 24997661 25021772 1 1 32 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 27.44 43.46 56.54 0 2 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 14 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 17 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK007 X 94416915 94437667 1 1 32 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA 4 4 4 27.44 37.43 59.24 0 1 2 Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK007 LIRI 0.95 2.18 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45097 RK007 male alive C22 69 1620 NA NA Included Liver-HCC LIRI JP 1 53.29 LIRI-JP::RK010 1 6079507 239192215 1 4 25 3 0 0 0 1 0.03 0.13 6 0 0 6 6 6 6 6 6 16.44 38.47 61.53 0 2 3 Whitelist LIRI-JP 0.54 0.32 0 0 0.33 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 7 0.14 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 2 141642310 141951407 1 1 25 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA NA NA NA 16.44 0.13 99.77 0 1 2 Whitelist LIRI-JP 0.62 0.71 0 NA 0.59 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 5 99747286 99874050 1 1 25 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 16.44 99.86 0 0 4 NA Whitelist LIRI-JP 0.62 0.43 NA NA 0.59 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 6 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 7 87028819 87169450 1 1 25 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.44 0.09 99.68 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 8 3389776 4077249 1 2 25 2 0 0 0 0 0.11 0.13 4 0.34 0 4 4 4 6 5 5 16.44 99.99 0 0 0 1 Whitelist LIRI-JP 0.54 0.32 0.34 0 0.48 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 9 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 10 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 11 65210616 65313873 1 1 25 0 1 0 0 0 0.39 0.11 2 0 NA NA NA NA NA NA NA 16.44 0.08 99.49 0 2 3 Whitelist LIRI-JP 0.62 0.28 0 NA 0.59 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 14 NA NA 0 0 25 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 16 NA NA 0 0 25 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 20 15053623 15412285 1 1 25 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA 5 5 5 16.44 98.07 0.99 0 2 3 Whitelist LIRI-JP 0.62 0.67 NA NA 0.59 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 21 NA NA 0 0 25 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK010 X NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK010 LIRI 0.59 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45099 RK010 male alive C22 46 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK012 1 NA NA 0 0 36 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.92 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 2 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 3 69035415 174074799 1 2 36 1 0 0 0 1 0.39 0.1 1 0 NA NA NA NA NA NA NA 20.39 0 99.86 0 2 NA Whitelist LIRI-JP 0.54 0.27 0 NA 0.59 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 3 0.04 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 4 158592560 159323236 1 1 36 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 4 3 3 20.39 5.17 94.6 0 2 3 Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 5 155467 3418672 6 6 36 2 2 1 1 0 0.88 0 4 0 0 4 0 3 4 0 0 20.39 99.86 0 0 1 3 Whitelist LIRI-JP 0.93 0 0 0 0.91 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 12 0.17 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 6 NA NA 0 0 36 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.72 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 7 NA NA 0 0 36 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 8 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 9 35940289 36105418 1 1 36 0 1 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 20.39 0.12 99.18 0 2 3 Whitelist LIRI-JP 0.62 0.86 NA NA 0.59 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 10 NA NA 0 0 36 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.23 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 11 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 12 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 13 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 15 37744689 37754928 1 1 36 0 0 0 1 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 20.39 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 17 NA NA 0 0 36 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 18 NA NA 0 0 36 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.49 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 19 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 20 NA NA 0 0 36 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.4 NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK012 X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK012 LIRI 0.47 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45101 RK012 male alive C22 63 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK014 1 83407154 214859648 1 3 56 2 0 0 0 1 0.11 1 7 0 0 7 3 4 9 3 3 72.23 47.68 49.35 0 2 0 Whitelist LIRI-JP 0.41 1 0 0 0.48 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 5 0.04 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 2 141706604 222505311 1 3 56 3 0 0 0 0 0.03 1 5 0 0 5 5 5 6 5 5 72.23 99.7 0.2 0 3 2 Whitelist LIRI-JP 0.41 1 0 0 0.33 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 6 0.05 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 3 170427736 170590089 1 1 56 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 72.23 56.52 43.33 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 4 2685947 183410129 1 5 56 2 2 0 0 1 0.26 0.42 9 0 0 9 3 9 10 3 3 72.23 40.91 59.07 0 2 1 Whitelist LIRI-JP 0.62 0.67 0 0 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 9 0.08 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 5 104702072 180283231 9 9 56 1 2 4 2 0 0.55 0 17 0 0 17 12 12 20 13 13 72.23 99.88 0 0 4 6 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 High confidence LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC Before polyploidization 18 0.16 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 6 62578041 62606148 1 1 56 0 0 1 0 0 0.39 0.39 2 0 NA NA NA NA 5 0 3 72.23 41.2 55.96 0 2 4 Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 7 11499903 12018687 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 72.23 99.78 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 8 42884402 126568220 1 6 56 2 1 1 0 2 0.57 0 11 0 0 11 3 3 15 3 3 72.23 70.88 25.5 0 7 9 Whitelist LIRI-JP 0.54 0 0 0 0.64 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 10 0.09 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 9 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 10 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 11 9065287 96175988 1 3 56 2 0 0 1 0 0.3 0.19 4 0 0 4 4 4 5 5 5 72.23 98.3 1.27 0 2 3 Whitelist LIRI-JP 0.62 0.41 0 0 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 6 0.05 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 12 56738766 56860457 1 1 56 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 72.23 99.92 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 13 41258528 110105570 1 5 56 1 1 0 0 3 0.57 0.01 10 0 0 10 3 3 12 3 3 72.23 77.32 22.68 0 8 1 Whitelist LIRI-JP 0.93 0.06 0 0 0.64 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 7 0.06 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 14 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 15 101383477 101412383 1 1 56 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 72.23 100 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 16 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 17 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 18 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 19 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 20 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK014 X NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK014 LIRI 0.38 3.38 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45103 RK014 male alive C22 47 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK015 1 51002701 193974682 1 3 37 2 1 0 0 0 0.3 0.77 5 0 0 5 3 5 6 4 4 11.97 5.19 94.81 0 2 1 Whitelist LIRI-JP 0.62 0.93 0 0 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 2 62578094 233192664 1 3 37 2 0 1 0 0 0.3 0.24 5 0 0 5 3 5 5 3 3 11.97 0.19 99.71 0 2 0 Whitelist LIRI-JP 0.62 0.47 0 0 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 3 51367867 164119511 1 3 37 2 1 0 0 0 0.3 0.33 4 0 0 4 3 4 5 3 3 11.97 0.66 99.2 1 2 1 Whitelist LIRI-JP 0.62 0.58 0 0 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 4 13779036 13860815 1 1 37 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 11.97 0.04 99.94 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 5 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 6 85550358 85599518 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 11.97 0.03 99.82 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 7 41091981 127660466 1 2 37 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 11.97 0 99.77 0 2 NA Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 8 42962382 43089051 1 1 37 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 5 5 5 11.97 0.09 96.48 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 9 103970607 104031717 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.97 0.04 99.25 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 10 70031069 70085708 1 1 37 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA NA NA NA 11.97 0.04 99.8 0 1 2 Whitelist LIRI-JP 0.62 0.1 0 NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 11 62661791 62801181 1 1 37 0 1 0 0 0 0.39 0.69 2 NA NA NA NA NA NA NA NA 11.97 0.1 99.47 0 2 3 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 13 22090001 82079805 1 3 37 3 0 0 0 0 0.03 0.04 6 0 0 6 6 6 9 9 9 11.97 39.03 60.97 0 1 2 Whitelist LIRI-JP 0.41 0.13 0 0 0.33 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 16 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 17 17714500 73801589 1 2 37 1 1 0 0 0 0.57 0.26 2 NA 0 NA NA NA NA NA NA 11.97 47.95 52.05 0 2 3 Whitelist LIRI-JP 0.68 0.51 NA 0 0.64 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 19 NA NA 0 0 37 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 20 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 22 18122744 18154285 1 1 37 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 11.97 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK015 X 129143914 129237537 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 11.97 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK015 LIRI 0.68 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45105 RK015 male alive C22 61 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK018 1 NA NA 0 0 27 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.07 0 NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 2 147127969 148749787 1 2 27 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 15.03 0.14 99.76 0 2 1 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 3 63851220 63885480 1 1 27 1 0 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 15.03 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 5 59467473 167073423 1 7 27 3 0 0 0 4 0.03 0 4 0 0 4 0 3 5 3 3 15.03 66.43 33.42 0 1 2 Whitelist LIRI-JP 0.13 0 0 0 0.33 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 10 0.19 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 6 NA NA 0 0 27 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 8 23616284 53621712 1 2 27 0 0 1 1 0 0.57 0.65 2 NA 0 NA NA NA NA NA NA 15.03 79.49 20.5 0 2 3 Whitelist LIRI-JP 0.68 0.86 NA 0 0.64 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 9 21947754 21975779 1 1 27 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.03 0 96.92 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 10 184846 87715332 1 3 27 2 1 0 0 0 0.3 0.13 5 0.04 0 5 3 5 6 4 4 15.03 0.26 99.56 0 2 1 Whitelist LIRI-JP 0.62 0.31 0.04 0 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 6 0.11 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 11 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 13 NA NA 0 0 27 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 18 39775340 39876171 1 1 27 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 3 15.03 0.2 99.77 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 22 43357335 43369761 1 1 27 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 15.03 23.78 65.11 0 2 NA Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK018 X 142136943 142154668 1 1 27 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.03 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK018 LIRI 0.19 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45109 RK018 male alive C22 63 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 1 197274880 205726085 2 2 323 1 1 0 0 0 0.57 0.92 7 0 0 7 4 7 13 5 5 78.54 100 0 0 3 4 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 2 40192116 208739826 1 7 323 0 4 0 1 2 0.04 0 13 0 0 13 5 13 13 5 13 78.54 99.89 0 0 4 5 Whitelist LIRI-JP 0.54 0 0 0 0.36 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 12 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 3 48523815 136702432 2 5 323 0 0 1 1 3 0.57 0.02 7 0 0 7 3 5 10 3 5 78.54 99.75 0.12 0 4 2 Whitelist LIRI-JP 0.62 0.07 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 7 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 4 1920105 24536664 1 3 323 0 2 0 0 1 0.11 0.01 4 0 0.05 4 4 4 6 5 5 78.54 30.09 69.69 0 4 6 Whitelist LIRI-JP 0.62 0.04 0 0.05 0.48 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 5 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 5 156788035 162131176 4 7 323 0 1 1 2 3 0.57 0.2 1 0 0 NA NA NA 12 9 9 78.54 99.87 0 0 4 NA Whitelist LIRI-JP 10 0.96 0.43 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 11 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 6 102249565 167532689 32 126 323 7 10 7 8 94 0.86 0 74 0 0 74 28 31 89 32 32 78.54 83.76 16.07 0 5 4 Whitelist LIRI-JP 10 0.68 0 0 0 0.9 1 High confidence LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC With other complex events 158 0.24 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 7 96908208 97016044 2 2 323 0 0 1 1 0 0.57 0.32 3 0 0 NA NA NA 10 3 5 78.54 99.76 0 0 5 8 Whitelist LIRI-JP 0.68 0.58 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 8 35798503 144746726 1 10 323 1 1 0 0 8 0.57 0.13 4 0 0 4 3 4 5 3 3 78.54 99.79 0.2 0 3 2 Whitelist LIRI-JP 0.86 0.32 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 12 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 9 26923894 80458907 1 4 323 2 1 0 1 0 0.57 0.11 4 0 0 4 3 4 6 4 6 78.54 76.59 22.71 1 4 2 Whitelist LIRI-JP 0.68 0.29 0 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 8 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 10 4609618 130110175 1 12 323 0 4 0 0 8 0.01 0.69 13 0 0 13 7 12 14 7 12 78.54 47.6 52.21 0 2 3 Whitelist LIRI-JP 6 0.54 0.89 0 0 0.16 1 Linked to high confidence LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC With other complex events 16 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 11 34127331 112504136 1 7 323 0 4 0 0 3 0.01 0.14 10 0 0 10 4 4 11 5 6 78.54 55.24 44.33 0 2 4 Whitelist LIRI-JP 0.47 0.34 0 0 0.16 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 11 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 12 64174368 133313418 44 133 323 16 8 11 9 89 0.33 0 88 0 0 88 60 74 92 62 78 78.54 95.1 0.11 0 3 4 Whitelist LIRI-JP 6 0.99 0 0 0 0.59 1 High confidence LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC After polyploidization 177 0.27 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 13 24946603 54754567 3 4 323 2 1 0 0 1 0.3 0.28 5 0 0 5 0 3 10 4 5 78.54 78.07 21.77 0 2 4 Whitelist LIRI-JP 0.68 0.53 0 0 0.59 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 7 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 14 47431797 75605594 1 2 323 1 1 0 0 0 0.57 0.02 5 NA 0 5 3 5 7 4 7 78.54 98.81 0.59 0 4 2 Whitelist LIRI-JP 0.68 0.07 NA 0 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 15 60908646 61086301 1 1 323 0 1 0 0 0 0.39 0.4 2 0 NA NA NA NA 8 5 8 78.54 95.22 0 0 4 5 Whitelist LIRI-JP 0.62 0.64 0 NA 0.59 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 16 3282391 3719078 1 1 323 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 78.54 99.9 0 0 4 5 Whitelist LIRI-JP 0.62 0.06 NA NA 0.59 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 17 16820205 73323114 1 7 323 0 3 0 0 4 0.03 0.73 9 0 0 9 3 5 10 3 6 78.54 76.33 18.4 0 4 3 Whitelist LIRI-JP 0.41 0.91 0 0 0.33 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 10 0.02 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 18 30106517 30284299 1 1 323 0 1 0 0 0 0.39 0.49 1 0 NA NA NA NA 4 0 3 78.54 99.96 0 0 4 NA Whitelist LIRI-JP 0.62 0.73 0 NA 0.59 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 19 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 20 265851 15428172 1 2 323 1 1 0 0 0 0.57 0.44 4 0 0.04 4 3 4 8 4 6 78.54 99.74 0 0 3 4 Whitelist LIRI-JP 0.68 0.69 0 0.04 0.64 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 21 25712452 25788991 1 1 323 0 1 0 0 0 0.39 1 2 NA 0 NA NA NA 4 3 4 78.54 77.35 0 0 3 5 Whitelist LIRI-JP 0.62 1 NA 0 0.59 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 22 NA NA 0 0 323 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK019 X 31046761 115742070 1 2 323 0 2 0 0 0 0.11 0 4 NA 0 4 4 4 4 4 4 78.54 22.14 77.86 0 1 2 Whitelist LIRI-JP 0.54 0 NA 0 0.48 1 No LIRI-JP RK019 LIRI 0.63 3.51 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45111 RK019 male alive C22 74 1590 NA NA Included Liver-HCC LIRI JP 1 52.3 LIRI-JP::RK020 1 19127605 39162237 1 1 20 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 5 3 3 32.6 15.8 84.2 0 1 2 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 2 NA NA 0 0 20 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.47 NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 4 140310890 140674919 1 1 20 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 32.6 13.5 86.32 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 5 57231172 73974115 1 1 20 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.6 9.25 90.61 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 7 6559538 6669928 1 1 20 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.6 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 9 452025 19746964 3 4 20 0 0 0 3 1 0.03 0 27 0 0 27 9 27 43 9 9 32.6 66 30.89 0 2 1 Whitelist LIRI-JP 0.21 0 0 0 0.33 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 7 0.18 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 10 31981710 135410467 1 1 20 0 0 0 1 0 0.39 0.61 7 NA NA 7 4 7 10 4 7 32.6 62.67 37.16 0 1 2 Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 12 29046255 29060687 2 2 20 1 0 0 1 0 0.57 0.06 2 NA 0 NA NA NA 6 6 6 32.6 24.83 71.43 0 1 2 Whitelist LIRI-JP 0.68 0.2 NA 0 0.64 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 16 374904 55832572 1 2 20 1 1 0 0 0 0.57 0.1 3 NA 0.04 NA NA NA NA NA NA 32.6 84.33 15.63 0 1 2 Whitelist LIRI-JP 0.68 0.26 NA 0.04 0.64 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 17 60835138 61157089 1 1 20 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA 4 4 4 32.6 27.32 67.83 0 1 2 Whitelist LIRI-JP 0.62 0.67 NA NA 0.59 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 19 NA NA 0 0 20 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK020 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK020 LIRI 0.81 1.73 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45113 RK020 male alive C22 58 1560 NA NA Included Liver-HCC LIRI JP 1 51.32 LIRI-JP::RK021 1 35398647 62437835 5 5 90 2 1 1 1 0 0.9 0 8 0 0 8 5 8 18 7 16 25.9 47.09 52.91 0 1 3 Whitelist LIRI-JP 0.93 0 0 0 0.92 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 10 0.06 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 2 9890948 41892457 1 2 90 1 0 0 0 1 0.39 0.57 1 0 NA NA NA NA NA NA NA 25.9 0 99.89 0 2 NA Whitelist LIRI-JP 0.68 0.79 0 NA 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 3 0.02 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 3 NA NA 0 0 90 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 4 67118854 70962820 3 3 90 1 1 1 0 0 0.8 0 5 0 0 5 4 5 11 5 6 25.9 64.74 35.06 0 2 3 Whitelist LIRI-JP 0.87 0.01 0 0 0.84 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 6 0.03 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 5 NA NA 0 0 90 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.11 0 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 6 NA NA 0 0 90 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.3 0 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 7 NA NA 0 0 90 0 0 0 0 0 NA 0.15 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.36 0.01 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 8 36724282 59102553 1 2 90 0 0 0 1 1 0.39 0.05 2 0 NA NA NA NA NA NA NA 25.9 84.7 15.29 0 2 3 Whitelist LIRI-JP 0.68 0.16 0 NA 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 3 0.02 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 9 NA NA 0 0 90 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.1 0 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 10 NA NA 0 0 90 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 11 14567675 40648828 1 2 90 0 0 0 1 1 0.39 0.07 1 0 NA NA NA NA 4 0 3 25.9 51.28 48.29 0 2 NA Whitelist LIRI-JP 0.68 0.21 0 NA 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 3 0.02 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 12 NA NA 0 0 90 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 0 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 13 80288388 91914919 1 1 90 0 0 0 1 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 25.9 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 14 NA NA 0 0 90 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 15 51290773 64920701 1 3 90 0 1 0 0 2 0.39 0.04 1 0 0 NA NA NA NA NA NA 25.9 0 99.87 0 2 NA Whitelist LIRI-JP 0.41 0.14 0 0 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 16 NA NA 0 0 90 0 0 0 0 0 NA 0.01 NA 0.05 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.05 0.05 NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 17 NA NA 0 0 90 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 18 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 19 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 20 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 22 NA NA 0 0 90 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 NA NA NA 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK021 X 132919527 133083508 1 1 90 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 25.9 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK021 LIRI 0.77 1.85 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578412_T_A,CN:1 2 LIRI-JP DO45115 RK021 male alive C22 81 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK022 1 25382216 214103987 1 3 35 3 0 0 0 0 0.03 0.35 6 0.04 0 6 4 6 7 5 5 37 45.36 54.44 0 1 2 Whitelist LIRI-JP 0.41 0.6 0.04 0 0.33 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 6 0.09 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 2 141722036 142043338 2 2 35 2 0 0 0 0 0.11 0.53 4 0 0 4 0 3 7 3 4 37 99.61 0.29 0 0 1 Whitelist LIRI-JP 0.54 0.76 0 0 0.48 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 3 6697287 142409083 1 3 35 2 0 0 1 0 0.3 0.73 5 0 0 5 5 5 5 5 5 37 0.15 99.71 0 2 1 Whitelist LIRI-JP 0.62 0.91 0 0 0.59 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 6 0.09 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 4 14228072 135352746 1 4 35 2 1 1 0 0 0.57 0.29 6 0 0 6 5 6 7 5 5 37 0.21 99.77 0 2 1 Whitelist LIRI-JP 0.68 0.54 0 0 0.64 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 8 0.11 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 5 100708455 179223413 1 2 35 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA NA NA NA 37 99.67 0.19 0 3 2 Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 6 83588029 162621990 1 3 35 3 0 0 0 0 0.03 0.16 6 0 0 6 6 6 7 7 7 37 99.45 0.42 0 2 3 Whitelist LIRI-JP 0.41 0.36 0 0 0.33 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 6 0.09 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 7 83803110 84135344 2 2 35 2 0 0 0 0 0.11 0.12 4 0 0 4 0 3 4 0 3 37 99.68 0.09 0 3 1 Whitelist LIRI-JP 0.54 0.3 0 0 0.48 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 8 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 9 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 10 78311093 78359086 1 1 35 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 11 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 13 108429341 108454862 1 1 35 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 5 5 5 37 37.7 62.3 0 1 2 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 14 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 17 NA NA 0 0 35 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 18 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 19 NA NA 0 0 35 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 22 18091716 18489603 1 1 35 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 37 0.78 99.22 0 1 2 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK022 X NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK022 LIRI 0.86 2.37 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577138_A_C,CN:1 2 LIRI-JP DO45117 RK022 female deceased C22 73 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK023 1 6295427 244664995 1 13 158 7 4 1 0 1 0.02 0.1 27 0 0 27 9 12 29 9 9 38.57 19.5 77.52 0 2 1 Whitelist LIRI-JP 0.21 0.27 0 0 0.33 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 25 0.08 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 2 14974200 153613313 1 6 158 4 0 0 0 2 0.01 0.25 9 0 0 9 7 9 9 7 7 38.57 0.19 99.71 1 2 1 Whitelist LIRI-JP 0.54 0.49 0 0 0.16 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 10 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 3 50172029 99645216 1 4 158 3 1 0 0 0 0.11 0.43 4 0 0 4 3 4 7 3 3 38.57 0.09 99.79 0 2 1 Whitelist LIRI-JP 0.54 0.68 0 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 4 19605098 160130775 1 7 158 3 4 0 0 0 0.06 0.34 5 0 0 5 3 4 6 3 4 38.57 97.31 0.08 0 1 2 Whitelist LIRI-JP 0.54 0.59 0 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 5 82383778 142667422 1 5 158 3 1 0 1 0 0.28 0.62 11 0 0 11 5 8 14 5 5 38.57 51.51 45.82 0 2 3 Whitelist LIRI-JP 0.62 0.84 0 0 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 10 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 6 63314557 63577241 2 2 158 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 24 5 11 38.57 96.19 0.62 0 1 2 Whitelist LIRI-JP 0.68 0.02 0 0 0.64 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 7 47085593 65729863 2 2 158 0 0 1 1 0 0.57 0.11 1 0 0 NA NA NA 10 4 4 38.57 45.38 54.39 0 2 NA Whitelist LIRI-JP 0.68 0.29 0 0 0.64 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 8 33145772 141434538 1 9 158 4 1 0 0 4 0.04 0.27 14 0 0 14 6 10 15 6 11 38.57 81.27 15.31 0 2 3 Whitelist LIRI-JP 0.41 0.52 0 0 0.36 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 9 4412705 136819602 1 7 158 3 2 0 0 2 0.14 0.22 3 0 0 NA NA NA 4 3 3 38.57 96.09 3.19 0 0 1 Whitelist LIRI-JP 8 0.54 0.45 0 0 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 12 0.04 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 10 385325 114267500 3 5 158 0 0 2 1 2 0.3 0.45 12 0 0 12 3 12 13 4 4 38.57 38.4 61.42 0 2 1 Whitelist LIRI-JP 2 0.62 0.69 0 0 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 11 6695356 100830420 1 4 158 3 1 0 0 0 0.11 0.57 5 0 0 5 5 5 5 5 5 38.57 1.07 98.51 0 2 1 Whitelist LIRI-JP 0.54 0.79 0 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 12 100519414 101308959 2 2 158 0 0 1 1 0 0.57 0.18 3 0 0 NA NA NA 8 6 6 38.57 13.1 86.82 0 2 3 Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 13 29071513 73627507 1 2 158 2 0 0 0 0 0.11 0.83 4 0 0 4 4 4 5 5 5 38.57 8.07 91.8 0 1 2 Whitelist LIRI-JP 0.54 0.97 0 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 14 39546612 39889947 1 1 158 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 38.57 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 15 59386261 59531725 2 2 158 1 1 0 0 0 0.57 0.63 3 0 0 NA NA NA NA NA NA 38.57 0.11 99.89 0 2 1 Whitelist LIRI-JP 0.68 0.84 0 0 0.64 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 16 15479789 78990253 1 2 158 2 0 0 0 0 0.11 0.8 5 NA 0 5 3 5 7 5 5 38.57 65.05 34.85 0 1 0 Whitelist LIRI-JP 0.54 0.95 NA 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 17 65200593 65385291 3 3 158 1 2 0 0 0 0.3 1 3 0 0 NA NA NA 6 3 5 38.57 72.03 27.95 0 2 3 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 18 2679136 61350094 1 4 158 2 1 0 0 1 0.3 0.32 5 0 0 5 3 5 6 3 3 38.57 40.36 59.6 0 2 3 Whitelist LIRI-JP 0.68 0.58 0 0 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 7 0.02 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 19 NA NA 0 0 158 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 20 14135605 21474508 1 2 158 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 38.57 0 99.03 0 2 NA Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 21 34934964 35207933 1 1 158 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 3 38.57 11.08 66.27 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 22 28653700 29674038 1 2 158 2 0 0 0 0 0.11 0.44 4 NA 0 4 4 4 5 5 5 38.57 1.02 98.49 0 1 2 Whitelist LIRI-JP 0.54 0.69 NA 0 0.48 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK023 X 96280621 108443722 2 4 158 2 0 1 1 0 0.57 0.86 3 0 0 NA NA NA NA NA NA 38.57 99.88 0.12 0 1 2 Whitelist LIRI-JP 0.68 0.99 0 0 0.64 0 No LIRI-JP RK023 LIRI 0.72 1.91 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45119 RK023 male deceased C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK024 1 190876422 190998706 1 1 25 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 4 3 3 30.03 100 0 0 3 4 Whitelist LIRI-JP 0.62 0.05 0 NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 2 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 3 133214787 133332440 1 1 25 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA NA NA NA 30.03 0.06 99.93 0 1 2 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 4 134382822 134969363 1 1 25 0 0 0 1 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 30.03 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 5 NA NA 0 0 25 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.43 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 6 NA NA 0 0 25 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 7 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 8 NA NA 0 0 25 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 9 71392146 122052300 1 2 25 1 0 0 0 1 0.39 0.07 2 NA NA NA NA NA NA NA NA 30.03 35.87 63.42 0 1 2 Whitelist LIRI-JP 0.68 0.21 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 3 0.06 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 11 NA NA 0 0 25 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 13 NA NA 0 0 25 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 15 100547724 100575870 1 1 25 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 30.03 0.03 99.97 0 2 3 Whitelist LIRI-JP 0.62 0.75 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 16 4368876 4379812 1 1 25 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 30.03 99.67 0 0 1 NA Whitelist LIRI-JP 0.62 0.11 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 20 18624107 18690384 1 1 25 1 0 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 30.03 0 99.03 0 2 NA Whitelist LIRI-JP 0.62 0.67 NA NA 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 22 NA NA 0 0 25 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK024 X 56383792 132708865 1 3 25 2 1 0 0 0 0.3 0.13 1 0 0 NA NA NA NA NA NA 30.03 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.32 0 0 0.59 0 No LIRI-JP RK024 LIRI 0.77 1.99 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO45121 RK024 male alive C22 61 1530 NA NA Included Liver-HCC LIRI JP 1 50.33 LIRI-JP::RK025 1 47403615 47438612 1 1 71 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA 5 3 3 88.95 99.83 0 0 4 NA Whitelist LIRI-JP 0.62 0.15 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 2 150490130 201942437 17 24 71 6 7 1 3 7 0.15 0 21 0 0 21 3 6 31 7 8 88.95 99.02 0.45 2 6 8 Whitelist LIRI-JP 0.87 0 0 0 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 41 0.29 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 3 NA NA 0 0 71 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 4 61832808 66857849 1 1 71 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 88.95 99.79 0 0 4 NA Whitelist LIRI-JP 0.62 0.25 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 5 5420780 5438022 1 1 71 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 88.95 99.88 0 0 4 NA Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 6 64091290 161470305 1 5 71 0 1 1 2 1 0.57 0 14 0 0 14 3 3 21 3 3 88.95 35.05 61.95 0 2 1 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 9 0.06 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 7 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 8 39711585 95356990 4 4 71 3 0 0 1 0 0.11 0.41 7 0 0 7 6 7 12 8 8 88.95 72.1 27.89 0 4 6 Whitelist LIRI-JP 0.54 0.66 0 0 0.48 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 8 0.06 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 9 21657437 22116984 1 2 71 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 8 3 7 88.95 99.52 0.25 1 4 1 Whitelist LIRI-JP 0.54 0.03 0 0 0.48 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 10 11483580 11493894 1 1 71 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 88.95 99.82 0 0 4 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 11 22410033 22625920 1 1 71 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 88.95 99.57 0 0 4 6 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 12 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 13 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 14 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 16 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 17 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 18 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 19 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 20 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 21 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 22 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK025 X 122197140 122252687 1 1 71 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA 7 7 7 88.95 80.98 15.65 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK025 LIRI 0.33 4.17 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:2 4 LIRI-JP DO45123 RK025 female deceased C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK026 1 59986152 239266605 2 2 34 0 0 1 1 0 0.57 0.34 2 0 0 NA NA NA NA NA NA 25.49 41.94 58.06 0 2 3 Whitelist LIRI-JP 0.68 0.59 0 0 0.64 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 2 152689800 152700629 1 1 34 0 1 0 0 0 0.39 0.76 1 0 NA NA NA NA NA NA NA 25.49 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.93 0 NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 3 17885794 17896061 1 1 34 0 1 0 0 0 0.39 0.51 1 0 NA NA NA NA NA NA NA 25.49 0 99.95 0 2 NA Whitelist LIRI-JP 0.62 0.76 0 NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 4 76690220 123711735 1 1 34 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 25.49 24.6 75.38 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 5 97767786 116081872 1 1 34 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 25.49 10.13 89.74 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 6 129334343 129346991 1 1 34 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 25.49 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 7 145937341 145955747 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.49 99.77 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 8 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 9 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 10 6540133 121874863 1 3 34 0 1 1 1 0 0.8 0.02 6 0 0 6 3 6 7 4 7 25.49 68.47 31.35 0 1 2 Whitelist LIRI-JP 0.87 0.08 0 0 0.84 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 11 108099786 109553060 1 2 34 1 1 0 0 0 0.57 0.02 4 0 0 4 3 4 7 5 5 25.49 4.64 94.94 0 2 1 Whitelist LIRI-JP 0.68 0.08 0 0 0.64 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 12 18124465 25017266 1 2 34 0 1 0 0 1 0.39 0.21 4 NA NA 4 3 4 6 3 3 25.49 20.23 76.03 0 2 1 Whitelist LIRI-JP 0.54 0.44 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 3 0.04 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 14 51448303 75557773 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.49 22.46 76.63 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 16 NA NA 0 0 34 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 18 NA NA 0 0 34 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 19 NA NA 0 0 34 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 21 43581298 43623252 1 1 34 0 0 0 1 0 0.39 0.06 2 NA 0 NA NA NA NA NA NA 25.49 0.09 77.27 0 2 3 Whitelist LIRI-JP 0.62 0.2 NA 0 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK026 X 146328390 146348369 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.49 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK026 LIRI 0.81 1.97 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45125 RK026 male alive C22 58 1680 NA NA Included Liver-HCC LIRI JP 1 55.26 LIRI-JP::RK027 1 10432694 105606739 2 5 129 0 0 3 1 1 0.11 0.33 1 0 0 NA NA NA 5 4 4 60.83 30.96 66.05 0 2 NA Whitelist LIRI-JP 0.45 0.58 0 0 0.48 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 9 0.03 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 2 43904230 215809639 1 10 129 4 1 0 0 5 0.04 0.34 5 0 0 5 3 5 5 3 3 60.83 99.88 0.02 0 3 2 Whitelist LIRI-JP 0.47 0.59 0 0 0.36 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 15 0.06 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 3 8265639 195684330 1 13 129 4 2 2 1 4 0.55 0.02 13 0 0 13 4 5 15 4 6 60.83 72.84 27.02 0 2 4 Whitelist LIRI-JP 0.8 0.09 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 22 0.09 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 4 18779047 63926481 1 3 129 0 3 0 0 0 0.03 0.29 6 0 0 6 3 6 12 4 7 60.83 52.88 46.89 0 3 4 Whitelist LIRI-JP 0.41 0.53 0 0 0.33 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 5 51377659 53843111 1 1 129 0 0 1 0 0 0.39 0.86 3 0 0 NA NA NA 7 4 7 60.83 97.42 0 0 3 5 Whitelist LIRI-JP 0.62 0.99 0 0 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 6 11410444 11441714 1 1 129 1 0 0 0 0 0.39 0.2 2 0.01 NA NA NA NA 6 6 6 60.83 42.47 57.38 0 2 3 Whitelist LIRI-JP 0.62 0.42 0.01 NA 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 7 81072933 81087208 1 1 129 0 1 0 0 0 0.39 0.33 2 0 NA NA NA NA 6 3 5 60.83 62.21 37.56 0 3 4 Whitelist LIRI-JP 0.62 0.58 0 NA 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 8 6409378 100854222 4 4 129 2 1 0 1 0 0.57 0.54 5 0 0 5 3 4 6 3 5 60.83 70.87 25.37 0 2 1 Whitelist LIRI-JP 0.68 0.77 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 9 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 10 69433634 77853859 1 2 129 1 0 0 1 0 0.57 1 1 0 0 NA NA NA 6 3 3 60.83 31.43 68.46 0 2 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 11 67389959 102058573 2 2 129 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 60.83 58.33 38.21 0 3 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 12 73872113 82171677 2 2 129 0 0 1 1 0 0.57 0.14 2 0 0 NA NA NA 12 4 6 60.83 99.71 0.21 0 3 4 Whitelist LIRI-JP 0.68 0.33 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 13 62899173 107888139 1 8 129 1 4 0 0 3 0.04 0.01 6 0 0 6 3 6 7 3 3 60.83 50.18 49.82 0 3 4 Whitelist LIRI-JP 0.54 0.06 0 0 0.36 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 13 0.05 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 14 67095154 106098973 1 2 129 1 1 0 0 0 0.57 0.8 2 0 0 NA NA NA 5 3 5 60.83 1 83.09 0 0 2 Whitelist LIRI-JP 0.68 0.95 0 0 0.64 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 15 52198579 89406254 1 4 129 1 1 0 1 1 0.8 0.78 5 0 0 5 3 5 6 3 5 60.83 49.09 50.91 0 3 4 Whitelist LIRI-JP 1 0.94 0 0 0.84 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 7 0.03 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 16 59018294 59150077 1 1 129 1 0 0 0 0 0.39 0.4 2 0 NA NA NA NA 6 5 5 60.83 99.6 0.31 0 2 3 Whitelist LIRI-JP 0.62 0.65 0 NA 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 17 13281324 64511121 1 3 129 2 0 0 1 0 0.3 0.17 6 0 0 6 3 4 7 4 4 60.83 83.41 16.57 0 4 6 Whitelist LIRI-JP 0.62 0.38 0 0 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 18 NA NA 0 0 129 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 19 7486816 51393150 1 3 129 2 1 0 0 0 0.3 0.11 11 0 0 11 4 6 12 5 5 60.83 67.44 25.28 0 3 5 Whitelist LIRI-JP 0.62 0.29 0 0 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 20 14136293 49282339 1 9 129 2 2 0 0 5 0.26 0 13 0 0 13 4 7 17 4 7 60.83 92.18 0 1 7 6 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 13 0.05 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 21 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 22 28899361 28934751 1 1 129 0 1 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 60.83 98.36 0 0 3 NA Whitelist LIRI-JP 0.62 0.42 NA NA 0.59 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK027 X 38145979 120390995 1 2 129 0 2 0 0 0 0.11 0.22 5 0 0 5 3 5 6 4 4 60.83 27.7 69.14 0 2 1 Whitelist LIRI-JP 0.54 0.46 0 0 0.48 0 No LIRI-JP RK027 LIRI 0.64 2.92 Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO45127 RK027 male deceased C22 73 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK028 1 NA NA 0 0 18 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.16 0 NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 2 141867098 211465699 1 2 18 0 1 1 0 0 0.57 0.19 2 0 0 NA NA NA NA NA NA 22.24 0.09 99.82 0 1 2 Whitelist LIRI-JP 0.68 0.41 0 0 0.64 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 4 0.11 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 3 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 4 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 7 155382940 155397280 1 1 18 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 22.24 0.39 96.97 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 2 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 8 33694938 144134777 1 3 18 1 1 0 1 0 0.8 0.06 4 0 0 4 3 4 5 3 3 22.24 50.25 49.63 0 3 2 Whitelist LIRI-JP 0.87 0.19 0 0 0.84 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 6 0.17 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 9 NA NA 0 0 18 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.36 NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 10 NA NA 0 0 18 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 12 NA NA 0 0 18 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 17 66773280 66792128 1 1 18 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 22.24 0.02 99.97 0 2 4 Whitelist LIRI-JP 0.62 0.64 NA NA 0.59 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 2 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 19 42979580 43008069 1 1 18 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 4 3 3 22.24 18.87 80.96 0 2 3 Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 2 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 21 NA NA 0 0 18 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 22 50175940 50187224 1 1 18 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 22.24 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 2 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK028 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK028 LIRI 0.76 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 LIRI-JP DO23508 RK028 female alive C22 79 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK029 1 9333574 151220847 1 4 13 2 1 0 0 1 0.3 0.02 8 0.01 0.03 8 4 5 11 4 6 10.35 54.51 45.48 0 2 3 Whitelist LIRI-JP 0.68 0.07 0.01 0.03 0.59 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 7 0.27 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 2 44225786 196838422 1 1 13 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 10.35 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 4 2313641 2604735 2 2 13 0 2 0 0 0 0.11 0.05 2 0.03 0 NA NA NA 5 3 3 10.35 14.89 85.1 0 2 4 Whitelist LIRI-JP 0.54 0.17 0.03 0 0.48 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 4 0.15 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 5 NA NA 0 0 13 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 16 67103664 67377652 1 1 13 0 1 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 10.35 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.54 NA NA 0.59 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 19 23510036 23520604 1 1 13 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 10.35 8.39 91.44 0 2 NA Whitelist LIRI-JP 0.62 0.1 NA NA 0.59 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 20 48272862 48507713 1 1 13 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 10.35 0.37 99.34 0 2 3 Whitelist LIRI-JP 0.62 0.49 NA NA 0.59 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK029 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK029 LIRI 0.8 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45129 RK029 male alive C22 61 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK030 1 102668257 106421955 3 3 134 1 1 1 0 0 0.8 0.63 5 0 0 5 3 5 21 7 7 58.49 54.86 42.16 0 2 1 Whitelist LIRI-JP 0.87 0.84 0 0 0.84 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 2 72489317 232102299 1 3 134 1 1 1 0 0 0.8 0.06 3 0 0 NA NA NA NA NA NA 58.49 99.9 0 1 3 5 Whitelist LIRI-JP 0.87 0.18 0 0 0.84 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 3 11624683 129048350 1 4 134 1 3 0 0 0 0.11 0.86 6 0 0 6 5 6 9 5 5 58.49 99.9 0.01 0 3 4 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 4 95299100 115325646 4 4 134 0 1 1 2 0 0.57 0.12 9 0 0 9 4 5 11 5 6 58.49 28.08 69.34 0 2 4 Whitelist LIRI-JP 0.68 0.3 0 0 0.64 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 5 50081194 58527630 4 5 134 1 2 1 0 1 0.57 0.72 7 0 0 7 5 5 7 5 5 58.49 97.33 0 0 3 5 Whitelist LIRI-JP 0.68 0.9 0 0 0.64 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 9 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 6 4750739 169684690 30 30 134 6 10 7 7 0 0.75 0 38 0 0 38 20 20 39 21 21 58.49 97.1 0 0 4 3 Whitelist LIRI-JP 0.86 0 0 0 0.83 1 High confidence LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC With other complex events 60 0.22 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 7 54952358 157720448 1 4 134 2 2 0 0 0 0.26 0.33 4 0 0 4 4 4 5 5 5 58.49 99.86 0 0 3 4 Whitelist LIRI-JP 0.62 0.58 0 0 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 8 40328954 70573121 3 3 134 0 2 1 0 0 0.3 0.23 8 0 0 8 8 8 15 9 9 58.49 93.96 2.35 0 3 4 Whitelist LIRI-JP 0.62 0.47 0 0 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 9 72824665 72871070 1 1 134 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA 4 3 3 58.49 99.33 0 0 1 3 Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 10 5092099 32137781 1 4 134 2 2 0 0 0 0.26 0.68 7 0 0 7 3 5 10 3 7 58.49 28 68.67 0 4 2 Whitelist LIRI-JP 0.62 0.88 0 0 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 11 34232316 34540371 1 1 134 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 58.49 0.23 99.21 0 2 4 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 12 31552029 31892999 1 1 134 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 3 3 58.49 99.92 0 0 3 4 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 13 NA NA 0 0 134 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 14 24850598 35060790 1 3 134 0 3 0 0 0 0.03 0.8 3 0 0 NA NA NA 6 3 3 58.49 49.61 31.68 0 3 4 Whitelist LIRI-JP 0.41 0.95 0 0 0.33 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 15 67369032 67494611 1 1 134 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 3 3 58.49 0.72 94.37 0 1 2 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 16 56842843 57049424 2 2 134 0 1 1 0 0 0.57 0.41 5 0 0 5 5 5 6 5 6 58.49 0.33 99.23 0 2 4 Whitelist LIRI-JP 0.68 0.66 0 0 0.64 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 17 40885237 64357685 1 2 134 0 2 0 0 0 0.11 1 4 0 0 4 4 4 7 5 5 58.49 68.35 27.2 0 4 6 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 18 NA NA 0 0 134 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 19 15250482 42983255 1 3 134 0 1 0 2 0 0.3 0.34 9 0 0 9 7 9 11 8 8 58.49 38.27 54.05 0 3 2 Whitelist LIRI-JP 0.62 0.59 0 0 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 20 47692241 47702908 1 1 134 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 58.49 99.03 0 0 3 4 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 21 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 22 32165395 32244259 1 1 134 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 58.49 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK030 X NA NA 0 0 134 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.67 0 NA NA 1 No LIRI-JP RK030 LIRI 0.88 2.82 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 LIRI-JP DO23509 RK030 male deceased C22 60 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK031 1 219954142 220101942 1 1 32 0 1 0 0 0 0.39 0.31 2 0 NA NA NA NA 4 3 3 43.16 58.45 41.54 0 2 3 Whitelist LIRI-JP 0.62 0.56 0 NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 2 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 3 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 4 159217509 159544747 1 1 32 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 43.16 99.99 0 0 0 1 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 5 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 6 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 7 NA NA 0 0 32 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 8 NA NA 0 0 32 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 9 15900701 129159579 1 8 32 3 0 0 1 4 0.11 0 4 0 0 4 4 4 5 5 5 43.16 8.94 90.36 0 1 2 Whitelist LIRI-JP 0.87 0 0 0 0.48 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 12 0.19 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 10 24437025 24450582 1 1 32 1 0 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 43.16 68.63 27.96 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 11 105594398 117648057 5 5 32 0 1 2 2 0 0.53 0 9 0 0 9 5 8 12 5 8 43.16 21.51 78.07 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 10 0.16 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 12 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 13 55642599 55799138 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 43.16 100 0 0 0 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 14 94793455 94971045 1 1 32 0 1 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 43.16 99.09 0 0 1 3 Whitelist LIRI-JP 0.62 0.23 NA NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 16 72605709 72626719 1 1 32 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 43.16 99.89 0 0 1 NA Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 2 0.03 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 17 NA NA 0 0 32 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.44 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK031 X NA NA 0 0 32 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK031 LIRI 0.66 1.61 Liver-HCC NA 0 0 frameshift_deletion,17_7576897_-_G,CN:1 2 LIRI-JP DO45131 RK031 male deceased C22 53 360 NA NA Included Liver-HCC LIRI JP 1 11.84 LIRI-JP::RK032 1 52971815 222118581 1 5 38 0 1 3 1 0 0.28 0 3 0 0 NA NA NA 4 4 4 33 42.58 57.41 0 3 2 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 10 0.13 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 2 69119829 69130346 1 1 38 0 0 0 1 0 0.39 0 1 0 NA NA NA NA NA NA NA 33 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 3 118284945 118332698 1 1 38 0 0 1 0 0 0.39 0.19 1 0 NA NA NA NA NA NA NA 33 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.41 0 NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 4 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 5 683984 776229 1 1 38 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 33 99.99 0 0 4 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 6 143356415 144086896 1 1 38 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 33 99.85 0 0 3 5 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 7 100781496 101136437 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 33 99.77 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 9 136582448 137310187 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 33 0.52 98.81 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 10 92308403 92368209 1 1 38 0 0 1 0 0 0.39 0.69 1 NA NA NA NA NA NA NA NA 33 27.97 68.46 0 2 NA Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 11 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 12 42142418 46229351 1 1 38 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 33 3.05 96.86 0 1 2 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 13 62256525 62300232 1 1 38 0 0 1 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 33 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 14 106650212 106841844 1 1 38 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 33 0 99.53 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 16 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 17 NA NA 0 0 38 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 18 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK032 X NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK032 LIRI 0.88 2.28 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45133 RK032 male deceased C22 64 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK033 1 10532279 114002204 1 5 39 2 0 1 0 2 0.3 0.03 6 0 0 6 3 6 10 4 4 86.26 95.57 1.46 0 2 3 Whitelist LIRI-JP 0.93 0.11 0 0 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 8 0.1 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 2 141597779 227451716 1 8 39 3 0 1 0 4 0.11 0 10 0 0 10 4 6 11 5 7 86.26 99.63 0.27 0 3 2 Whitelist LIRI-JP 0.62 0 0 0 0.48 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 12 0.15 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 3 59886414 59929838 1 1 39 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 86.26 99.84 0.02 0 2 4 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 4 92387281 92525498 1 1 39 0 1 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 86.26 99.98 0 0 4 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 5 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 6 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 7 115543719 115613482 1 1 39 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 86.26 99.77 0 0 3 4 Whitelist LIRI-JP 0.62 0.36 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 8 3269180 3651570 3 3 39 3 0 0 0 0 0.03 0 6 0 0 6 3 4 13 4 7 86.26 99.75 0.24 0 2 0 Whitelist LIRI-JP 0.41 0 0 0 0.33 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 6 0.08 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 9 14974584 22610008 2 2 39 0 1 1 0 0 0.57 0.2 3 0 0 NA NA NA NA NA NA 86.26 99.32 0 0 3 1 Whitelist LIRI-JP 0.68 0.42 0 0 0.64 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 10 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 11 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 12 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 16 87905695 88049639 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.26 99.89 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 17 NA NA 0 0 39 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.08 NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 18 32597994 32691360 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.26 0.12 99.85 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 20 48931491 49049510 1 2 39 0 0 1 1 0 0.57 0.2 4 NA 0 4 3 4 5 3 3 86.26 99.03 0 0 8 5 Whitelist LIRI-JP 0.68 0.43 NA 0 0.64 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 22 36784663 36926868 1 1 39 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 86.26 88.89 0 0 4 6 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK033 X NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK033 LIRI 0.26 3.45 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45135 RK033 male alive C22 77 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK034 1 114111741 114156159 1 1 50 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 37.87 96.97 0 0 1 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 2 46533825 46558462 1 1 50 0 0 0 1 0 0.39 0.8 3 0 NA NA NA NA 5 5 5 37.87 0.01 99.88 0 2 1 Whitelist LIRI-JP 0.62 0.95 0 NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 3 41359437 41738771 1 1 50 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA 4 4 4 37.87 0.67 99.18 0 2 NA Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 4 96291786 96357263 1 1 50 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 4 4 37.87 64.37 35.61 0 1 2 Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 5 1311514 87296092 5 9 50 2 1 1 1 4 0.9 0 7 0 0 7 5 5 8 5 5 37.87 5.78 94.08 0 2 3 Whitelist LIRI-JP 0.85 0 0 0 0.92 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 14 0.14 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 6 54650928 54662241 1 1 50 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 37.87 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 7 127527448 127689703 1 1 50 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 37.87 0 99.78 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 8 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 9 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 10 131961169 132032900 1 1 50 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.87 99.82 0 0 0 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 11 35703485 125782152 1 3 50 1 2 0 0 0 0.3 0.29 4 0 0 4 3 4 5 3 3 37.87 0.08 99.49 0 2 1 Whitelist LIRI-JP 0.62 0.54 0 0 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 6 0.06 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 12 44914518 52005174 1 3 50 0 0 0 1 2 0.39 0.01 2 0 0 NA NA NA 6 4 6 37.87 85.38 14.54 0 1 3 Whitelist LIRI-JP 5 0.62 0.04 0 0 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 4 0.04 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 13 32645648 91126844 1 3 50 1 0 0 1 1 0.57 0.25 4 NA 0 4 4 4 6 4 5 37.87 36.65 60.57 0 2 3 Whitelist LIRI-JP 0.87 0.49 NA 0 0.64 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 5 0.05 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 14 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 15 45751127 45764362 1 1 50 0 0 0 1 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 37.87 55.26 44.63 0 2 4 Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 16 34391308 34682337 1 2 50 0 1 1 0 0 0.57 0 5 0 0 5 3 3 10 5 5 37.87 57.71 37.76 0 5 10 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 4 0.04 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 17 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 18 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 19 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 20 10454759 53938395 1 4 50 2 1 0 1 0 0.57 0 6 0 0 6 4 6 8 5 5 37.87 15.01 83.99 0 2 1 Whitelist LIRI-JP 0.68 0.02 0 0 0.64 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 8 0.08 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 21 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 22 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK034 X NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK034 LIRI 0.65 1.81 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45137 RK034 male alive C22 38 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 1 27054194 163062669 1 3 58 3 0 0 0 0 0.03 0.81 6 0 0 6 6 6 7 6 6 25.09 51.39 48.61 0 1 2 Whitelist LIRI-JP 0.41 0.95 0 0 0.33 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 2 51159433 51796836 2 2 58 0 0 1 1 0 0.57 0.34 4 0 0 4 4 4 5 5 5 25.09 0.03 99.88 0 2 3 Whitelist LIRI-JP 0.68 0.59 0 0 0.64 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 3 3600031 86336352 1 3 58 3 0 0 0 0 0.03 1 3 0 0 NA NA NA 4 4 4 25.09 10.77 89.11 1 2 1 Whitelist LIRI-JP 0.41 1 0 0 0.33 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 4 26569555 36205639 1 3 58 2 1 0 0 0 0.3 0.11 1 0 0 NA NA NA NA NA NA 25.09 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.28 0 0 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 5 NA NA 0 0 58 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 6 6908371 130417151 1 4 58 3 0 0 0 1 0.03 0.78 8 0.6 0 8 4 5 10 4 7 25.09 92.3 4.87 0 1 2 Whitelist LIRI-JP 0.54 0.93 0.6 0 0.33 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 7 0.06 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 7 27974564 28095095 1 1 58 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 25.09 0 99.73 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 8 NA NA 0 0 58 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 0 NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 9 15721143 131422578 1 2 58 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 25.09 99.33 0 0 1 NA Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 10 77190038 77460383 1 1 58 1 0 0 0 0 0.39 0.34 1 0 NA NA NA NA NA NA NA 25.09 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.59 0 NA 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 11 1511471 123601942 1 3 58 3 0 0 0 0 0.03 0.75 4 0 0 4 4 4 5 5 5 25.09 0.07 99.51 0 1 2 Whitelist LIRI-JP 0.41 0.92 0 0 0.33 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 12 14625532 64493480 1 3 58 3 0 0 0 0 0.03 0.75 3 0 0 NA NA NA NA NA NA 25.09 0.11 99.81 0 2 1 Whitelist LIRI-JP 0.41 0.92 0 0 0.33 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 13 59313599 72132083 1 2 58 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 25.09 15.04 82.18 0 2 NA Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 14 NA NA 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 15 42639404 42737206 1 1 58 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 25.09 0.1 99.75 0 1 2 Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 16 NA NA 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 17 2417901 2520777 1 1 58 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 25.09 45.03 54.97 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 18 18875347 18935797 1 1 58 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 25.09 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 19 11042088 23335049 1 2 58 2 0 0 0 0 0.11 0.32 4 NA 0 4 4 4 6 6 6 25.09 38.11 61.71 0 1 2 Whitelist LIRI-JP 0.54 0.57 NA 0 0.48 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 20 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 21 NA NA 0 0 58 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 22 NA NA 0 0 58 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK035 X 57887405 142463446 1 2 58 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 25.09 99.92 0.08 0 1 2 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK035 LIRI 0.73 1.88 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45139 RK035 male alive C22 63 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 1 59126630 72126300 4 4 22 0 0 2 2 0 0.26 0 1 0 0 NA NA NA 5 3 4 82.71 99.68 0 0 4 NA Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 8 0.18 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 3 NA NA 0 0 22 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 4 172233347 172245045 1 1 22 0 0 1 0 0 0.39 0.18 1 0 NA NA NA NA NA NA NA 82.71 30.23 69.53 0 2 NA Whitelist LIRI-JP 0.62 0.4 0 NA 0.59 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 2 0.05 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 8 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 10 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 11 98765792 98777854 1 1 22 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 24 14 16 82.71 99.29 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 2 0.05 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 12 110646029 110833444 1 1 22 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 82.71 99.92 0 0 5 NA Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 2 0.05 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 14 NA NA 0 0 22 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 20 7144562 7157563 1 1 22 0 0 0 1 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 82.71 99.87 0 0 6 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 2 0.05 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK036 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK036 LIRI NA NA Liver-HCC NA 0 0 NA 5 LIRI-JP DO45141 RK036 male alive C22 73 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK037 1 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 5 60714295 121621732 1 2 15 1 0 0 1 0 0.57 0.06 2 0.3 0 NA NA NA NA NA NA 17.79 99.82 0.03 0 2 3 Whitelist LIRI-JP 0.68 0.19 0.31 0 0.64 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 4 0.13 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 6 18290537 18317141 2 2 15 0 0 1 1 0 0.57 0.23 1 NA 0 NA NA NA NA NA NA 17.79 0 99.85 0 2 NA Whitelist LIRI-JP 0.68 0.46 NA 0 0.64 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 4 0.13 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 8 143959866 143997889 1 1 15 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 17.79 96.44 0 0 6 NA Whitelist LIRI-JP 0.62 0.39 NA NA 0.59 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 2 0.07 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 12 3820405 3860437 1 1 15 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA 4 3 3 17.79 18.99 80.92 0 0 1 Whitelist LIRI-JP 0.62 0.36 NA NA 0.59 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 2 0.07 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 13 74584032 74638626 1 1 15 1 0 0 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 17.79 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.66 NA NA 0.59 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 2 0.07 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 14 NA NA 0 0 15 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 16 87696273 87903597 1 1 15 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 17.79 0.23 99.39 0 2 3 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 2 0.07 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 17 69226802 69309100 1 1 15 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 6 3 5 17.79 28.72 66.83 0 2 3 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 2 0.07 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 21 NA NA 0 0 15 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.06 NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK037 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK037 LIRI 0.49 2.08 Liver-HCC NA 0 0 stopgain,17_7577579_-_G,CN:1 2 LIRI-JP DO45143 RK037 male alive C22 69 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK038 1 86334918 114912281 4 4 99 0 0 3 1 0 0.11 0.45 3 0 0 NA NA NA 5 4 4 25.3 48.61 48.42 4 2 3 Whitelist LIRI-JP 0.54 0.7 0 0 0.48 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 8 0.04 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 2 142048726 187465693 1 2 99 2 0 0 0 0 0.11 0.15 1 0 0 NA NA NA NA NA NA 25.3 0 99.9 0 2 NA Whitelist LIRI-JP 0.54 0.34 0 0 0.48 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 4 0.02 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 3 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 4 NA NA 0 0 99 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.06 NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 5 98992683 164002443 5 6 99 1 1 3 0 1 0.28 0.06 1 0 0 NA NA NA NA NA NA 25.3 0 99.86 0 2 NA Whitelist LIRI-JP 0.68 0.18 0 0 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 11 0.06 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 6 102965111 108005363 10 11 99 2 3 3 2 1 0.94 0 8 0 0 8 6 8 12 7 11 25.3 4.28 95.58 0 2 3 Whitelist LIRI-JP 0.98 0 0 0 0.96 1 Low confidence LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC Canonical without polyploidization 21 0.11 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 7 3897175 81404469 1 2 99 1 1 0 0 0 0.57 0.18 1 NA 0.04 NA NA NA NA NA NA 25.3 0 99.78 0 2 NA Whitelist LIRI-JP 0.68 0.4 NA 0.04 0.64 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 4 0.02 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 8 51525429 64905597 1 1 99 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 25.3 96.56 0 0 4 NA Whitelist LIRI-JP 0.62 0.49 NA NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 9 31131469 136853417 4 4 99 1 0 0 3 0 0.11 0.02 6 0 0 6 6 6 10 10 10 25.3 68.85 30.98 3 1 2 Whitelist LIRI-JP 0.54 0.07 0 0 0.48 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 8 0.04 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 10 43251790 44220749 1 1 99 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 25.3 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 11 134313588 134325196 1 1 99 0 0 0 1 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 25.3 0.24 99.48 0 2 4 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 12 57837969 108050866 2 7 99 2 2 1 1 1 0.88 0.03 6 0 0 6 6 6 7 7 7 25.3 5.3 94.61 0 2 3 Whitelist LIRI-JP 0.96 0.1 0 0 0.91 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 13 0.07 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 13 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 14 28726553 68099463 1 2 99 0 1 1 0 0 0.57 0.77 1 NA 0 NA NA NA NA NA NA 25.3 72.33 26.76 0 1 NA Whitelist LIRI-JP 0.68 0.93 NA 0 0.64 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 4 0.02 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 15 60806186 61512762 1 1 99 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 25.3 0.69 99.31 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 16 12398550 12589966 1 1 99 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 25.3 1.85 98.05 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 17 48716272 71333572 1 1 99 0 0 1 0 0 0.39 0.35 1 0 NA NA NA NA 7 5 5 25.3 63.41 36.58 0 1 NA Whitelist LIRI-JP 0.62 0.6 0 NA 0.59 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 2 0.01 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 18 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 19 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 20 2893921 4118391 1 4 99 1 1 0 0 2 0.57 0.06 1 0 0 NA NA NA NA NA NA 25.3 0 99.03 0 2 NA Whitelist LIRI-JP 0.68 0.19 0 0 0.64 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 6 0.03 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 21 14694052 48076206 13 13 99 4 4 3 2 0 0.84 0 7 0 0 7 7 7 7 7 7 25.3 75.92 1.32 0 1 2 Whitelist LIRI-JP 0.9 0 0 0 0.88 1 High confidence LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC Canonical without polyploidization 26 0.13 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 22 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 0 0 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK038 X 13222642 14154892 4 7 99 0 2 1 1 3 0.57 0.03 1 0 0 NA NA NA NA NA NA 25.3 0 99.77 0 2 NA Whitelist LIRI-JP 0.96 0.12 0 0 0.64 1 No LIRI-JP RK038 LIRI 0.69 1.92 Liver-HCC NA 11 0.06 stopgain,17_7578441_T_G,CN:1 2 LIRI-JP DO23510 RK038 female alive C22 80 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK041 1 NA NA 0 0 50 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 2 2383136 196844267 1 2 50 0 0 1 1 0 0.57 0.31 1 0 0 NA NA NA NA NA NA 16.3 0 99.9 0 2 NA Whitelist LIRI-JP 0.68 0.56 0 0 0.64 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 3 7673029 8528986 1 1 50 0 1 0 0 0 0.39 0.78 2 0 NA NA NA NA NA NA NA 16.3 0.43 99.45 0 2 3 Whitelist LIRI-JP 0.62 0.93 0 NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 4 69646277 124995060 1 2 50 0 0 2 0 0 0.11 0.58 1 0 0 NA NA NA NA NA NA 16.3 0 99.79 0 2 NA Whitelist LIRI-JP 0.54 0.8 0 0 0.48 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 5 58388683 114168322 1 3 50 1 1 0 1 0 0.8 0.04 1 0 0 NA NA NA 4 3 4 16.3 10.92 86.41 0 2 NA Whitelist LIRI-JP 0.87 0.13 0 0 0.84 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 6 2626920 42675846 1 2 50 1 1 0 0 0 0.57 0.54 4 0 0.01 4 3 4 5 3 3 16.3 0.19 99.66 0 2 1 Whitelist LIRI-JP 0.68 0.77 0 0.01 0.64 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 7 38706689 40017159 1 1 50 0 1 0 0 0 0.39 0.75 2 0 NA NA NA NA NA NA NA 16.3 0.82 98.94 0 2 3 Whitelist LIRI-JP 0.62 0.92 0 NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 8 105592485 105621630 1 1 50 0 0 0 1 0 0.39 0.74 1 0 NA NA NA NA NA NA NA 16.3 49.27 50.73 0 3 NA Whitelist LIRI-JP 0.62 0.91 0 NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 9 23150829 23166292 1 1 50 0 0 1 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 16.3 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 10 39105433 89716494 1 2 50 1 0 1 0 0 0.57 0.29 4 0 0 4 3 4 4 3 3 16.3 68.6 27.97 0 1 0 Whitelist LIRI-JP 0.68 0.54 0 0 0.64 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 11 56219462 105551835 1 2 50 0 1 0 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 16.3 0 99.57 0 2 NA Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 12 123508493 123571903 1 1 50 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 16.3 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 13 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 14 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 15 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 16 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 17 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 18 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 19 43933055 43944580 1 1 50 0 0 0 1 0 0.39 1 2 NA NA NA NA NA 4 4 4 16.3 67.02 25.7 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 20 7144190 14258363 1 2 50 0 1 0 1 0 0.57 0.29 1 NA 0 NA NA NA NA NA NA 16.3 0 99.03 0 2 NA Whitelist LIRI-JP 0.68 0.54 NA 0 0.64 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 21 34974148 35148860 1 1 50 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 16.3 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 22 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK041 X NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK041 LIRI 0.59 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577100_C_T,CN:1 2 LIRI-JP DO45145 RK041 male deceased C22 78 60 NA NA Included Liver-HCC LIRI JP 1 1.97 LIRI-JP::RK042 1 188808040 188842013 2 2 93 1 1 0 0 0 0.57 1 1 0 0 NA NA NA 6 5 6 35.76 91.15 5.87 0 3 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 2 39425233 242096545 1 4 93 2 0 1 1 0 0.57 0.45 7 0 0 7 7 7 7 7 7 35.76 0.06 99.84 0 2 1 Whitelist LIRI-JP 0.68 0.7 0 0 0.64 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 3 NA NA 0 0 93 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 4 26444895 45511514 7 10 93 0 2 3 2 3 0.44 0 17 0 0 17 5 9 29 15 15 35.76 58.77 38.7 0 4 1 Whitelist LIRI-JP 0.86 0 0 0 0.64 0 Low confidence LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC With other complex events 17 0.09 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 5 107638661 174114209 1 2 93 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 5 5 5 35.76 0.02 99.84 0 1 2 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 6 163508300 163546425 1 1 93 1 0 0 0 0 0.39 0.38 2 0 NA NA NA NA NA NA NA 35.76 0.02 99.83 0 1 2 Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 7 17271414 103150821 1 3 93 2 1 0 0 0 0.3 1 6 0 0 6 4 6 8 5 5 35.76 7.75 92.02 0 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 8 30371255 87560417 1 7 93 5 0 0 0 2 0 0.03 10 0 0 10 7 10 12 7 12 35.76 99.88 0.11 0 3 2 Whitelist LIRI-JP 0.13 0.1 0 0 0.07 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 12 0.06 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 9 12123923 13030221 1 1 93 1 0 0 0 0 0.39 0.79 2 0.01 NA NA NA NA 5 3 3 35.76 35.58 64.23 0 0 1 Whitelist LIRI-JP 0.62 0.94 0.01 NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 10 43327961 43363137 1 1 93 1 0 0 0 0 0.39 0.8 2 0.03 NA NA NA NA NA NA NA 35.76 0.03 99.8 0 1 2 Whitelist LIRI-JP 0.62 0.95 0.03 NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 11 20359926 76231511 2 2 93 0 0 1 1 0 0.57 0.21 3 0 0 NA NA NA 7 7 7 35.76 50.06 49.38 0 2 1 Whitelist LIRI-JP 0.68 0.44 0 0 0.64 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 12 79332003 79412534 1 1 93 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 35.76 0.08 99.84 0 1 2 Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 13 94831085 95018683 1 1 93 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 35.76 100 0 0 0 1 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 14 33224292 36109166 1 2 93 2 0 0 0 0 0.11 0.54 4 0 0 4 4 4 9 5 5 35.76 38.99 60.09 0 1 2 Whitelist LIRI-JP 0.54 0.77 0 0 0.48 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 15 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 16 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 17 NA NA 0 0 93 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 18 22580542 22684925 1 1 93 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 35.76 51.52 48.44 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 19 53415712 53429055 1 1 93 0 0 1 0 0 0.39 0 2 0 NA NA NA NA 5 3 3 35.76 7.03 92.8 0 1 2 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 20 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 21 18732162 18745067 1 1 93 1 0 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 35.76 0 77.73 0 2 NA Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 22 NA NA 0 0 93 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK042 X 2236059 2398878 1 1 93 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 35.76 89.06 10.94 0 1 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK042 LIRI 0.88 1.81 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45147 RK042 male deceased C22 57 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK043 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 5 NA NA 0 0 11 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 6 NA NA 0 0 11 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 10 NA NA 0 0 11 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 11 NA NA 0 0 11 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 13 58392511 61670822 1 1 11 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 5 5 5 85.77 100 0 0 3 4 Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 2 0.09 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 14 NA NA 0 0 11 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 17 20510445 48785892 1 2 11 1 1 0 0 0 0.57 0.03 3 NA 0 NA NA NA 4 0 0 85.77 99.94 0 0 3 5 Whitelist LIRI-JP 0.68 0.12 NA 0 0.64 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 4 0.18 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 18 49032835 50600549 1 1 11 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 85.77 97.98 2.01 0 2 4 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 2 0.09 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 21 NA NA 0 0 11 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK043 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK043 LIRI 0.4 3.71 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23512 RK043 male alive C22 60 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 2 NA NA 0 0 30 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.27 NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 3 11299043 189948199 1 4 30 2 1 0 0 1 0.3 0.06 5 0.04 0 5 4 5 6 4 4 26.78 18.46 81.42 0 1 2 Whitelist LIRI-JP 0.68 0.18 0.04 0 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 7 0.12 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 4 136483366 136523450 1 1 30 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 26.78 99.7 0.02 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 5 NA NA 0 0 30 0 0 0 0 0 NA 0.01 NA 0.03 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.05 0.03 NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 6 165912940 165923619 1 1 30 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 26.78 0.01 99.75 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 7 104679928 104748217 1 1 30 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.78 0 99.95 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 8 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 9 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 10 17128864 27323405 1 2 30 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 26.78 66.88 32.93 0 2 NA Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 11 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 12 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 13 20211584 26127477 1 1 30 0 0 1 0 0 0.39 0.28 2 NA NA NA NA NA 4 0 0 26.78 22.38 74.22 0 3 4 Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 15 85925905 86052924 1 1 30 1 0 0 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 26.78 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 18 18823037 20275371 1 2 30 0 1 0 0 1 0.39 0.19 3 NA NA NA NA NA 4 4 4 26.78 93.69 6.27 0 1 2 Whitelist LIRI-JP 0.68 0.41 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 3 0.05 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 19 1657286 6029083 1 2 30 0 2 0 0 0 0.11 0.12 4 NA 0 4 4 4 5 4 5 26.78 3.67 96.15 0 2 3 Whitelist LIRI-JP 0.54 0.3 NA 0 0.48 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 21 17027606 24171655 1 1 30 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 4 4 26.78 63.34 14.01 0 1 2 Whitelist LIRI-JP 0.62 0.17 NA NA 0.59 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK044 X NA NA 0 0 30 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK044 LIRI 0.78 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578191_T_A,CN:1 2 LIRI-JP DO45149 RK044 female alive C22 70 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK046 1 2313547 118088079 1 3 72 2 1 0 0 0 0.3 0.66 1 0.02 0.14 NA NA NA NA NA NA 12.35 0 96.64 0 2 NA Whitelist LIRI-JP 0.62 0.87 0.02 0.14 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 2 211461033 211478140 1 1 72 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 12.35 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.11 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 3 19738717 174837291 1 6 72 5 0 1 0 0 0.01 0.16 1 0 0 NA NA NA NA NA NA 12.35 0 99.95 0 2 NA Whitelist LIRI-JP 0.25 0.37 0 0 0.19 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 12 0.08 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 4 8612320 21572609 9 9 72 3 2 2 2 0 0.95 0 1 0 0 NA NA NA NA NA NA 12.35 0.02 99.79 0 2 NA Whitelist LIRI-JP 0.97 0 0 0 0.97 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 18 0.12 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 5 71582615 134168303 1 2 72 2 0 0 0 0 0.11 0.33 1 NA 0 NA NA NA 5 3 5 12.35 0.17 99.69 0 2 NA Whitelist LIRI-JP 0.54 0.58 NA 0 0.48 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 6 100636012 101555846 2 2 72 2 0 0 0 0 0.11 0.62 1 0 0 NA NA NA 6 6 6 12.35 61.94 37.82 0 1 NA Whitelist LIRI-JP 0.54 0.83 0 0 0.48 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 7 7223519 112097577 1 3 72 3 0 0 0 0 0.03 1 3 0 0 NA NA NA NA NA NA 12.35 0.14 99.84 0 2 3 Whitelist LIRI-JP 0.41 1 0 0 0.33 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 8 66538051 136218151 1 4 72 3 0 0 1 0 0.11 0.79 1 0 0 NA NA NA NA NA NA 12.35 70.55 29.33 0 3 NA Whitelist LIRI-JP 0.54 0.94 0 0 0.48 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 9 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 10 34430294 34819249 1 1 72 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 12.35 0.06 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 11 80244238 116933451 1 4 72 4 0 0 0 0 0.01 0.39 1 0 0 NA NA NA NA NA NA 12.35 0 99.86 0 2 NA Whitelist LIRI-JP 0.21 0.64 0 0 0.16 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 12 17370059 17435880 2 2 72 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA NA NA NA 12.35 0.15 99.77 0 2 NA Whitelist LIRI-JP 0.68 0.36 0 0 0.64 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 13 93938418 94021606 1 1 72 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.35 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 15 50228119 50435147 1 1 72 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.35 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 16 165265 373634 1 1 72 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.35 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 17 NA NA 0 0 72 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 18 NA NA 0 0 72 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 19 44007187 44930617 1 1 72 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.35 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 20 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK046 X NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK046 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45151 RK046 male alive C22 64 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK047 1 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 2 160022417 160176008 1 1 27 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.33 0 99.91 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 3 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 4 27566070 166108242 1 4 27 1 3 0 0 0 0.11 0.1 3 0 0 NA NA NA 5 5 5 14.33 3.01 96.97 0 2 3 Whitelist LIRI-JP 0.54 0.27 0 0 0.48 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 8 0.15 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 5 NA NA 0 0 27 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 10 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 6 20523289 91909406 1 1 27 0 0 1 0 0 0.39 1 3 NA NA NA NA NA 4 0 4 14.33 58.13 38.53 0 2 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 7 23815846 28600489 1 2 27 0 1 1 0 0 0.57 0.18 3 0 0 NA NA NA 4 3 3 14.33 0.08 96.95 0 2 4 Whitelist LIRI-JP 0.68 0.39 0 0 0.64 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 9 18889536 19211713 1 1 27 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 14.33 0.51 98.82 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 10 8959892 11662847 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 4 14.33 2.45 93.95 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 11 57063648 57365678 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 5 14.33 1.23 95.31 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 17 12372756 80708987 1 3 27 0 1 0 2 0 0.3 0.04 5 0 0 5 4 5 6 4 4 14.33 50.03 49.35 0 2 3 Whitelist LIRI-JP 0.62 0.13 0 0 0.59 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 6 0.11 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 19 4600026 46808196 1 4 27 0 2 1 1 0 0.57 0 4 0 0 4 4 4 6 6 6 14.33 53.61 39.11 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 8 0.15 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 21 NA NA 0 0 27 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.53 NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 22 NA NA 0 0 27 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK047 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK047 LIRI 0.26 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45153 RK047 female alive C22 77 1380 NA NA Included Liver-HCC LIRI JP 1 45.39 LIRI-JP::RK049 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 2 41693326 41741668 1 1 9 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 27.64 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.39 NA NA 0.59 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 2 0.11 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 3 NA NA 0 0 9 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.72 NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 4 NA NA 0 0 9 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 5 24092545 24147808 1 1 9 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 27.64 99.86 0 0 1 3 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 2 0.11 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 7 NA NA 0 0 9 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 10 NA NA 0 0 9 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.6 NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 11 5189471 5220844 1 1 9 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA 4 4 4 27.64 20.94 78.62 0 1 2 Whitelist LIRI-JP 0.62 0.6 NA NA 0.59 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 2 0.11 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 16 79031006 79222885 1 1 9 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 27.64 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.45 NA NA 0.59 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 2 0.11 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 21 30685352 30738538 1 1 9 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 27.64 0.11 77.24 0 0 2 Whitelist LIRI-JP 0.62 0.27 NA NA 0.59 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 2 0.11 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK049 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK049 LIRI 0.24 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45157 RK049 male alive C22 62 1980 NA NA Included Liver-HCC LIRI JP 1 65.13 LIRI-JP::RK050 1 27054844 155275249 1 2 48 1 1 0 0 0 0.57 0.79 5 0 0 5 3 3 6 3 3 26.26 41.96 58 0 5 1 Whitelist LIRI-JP 0.68 0.94 0 0 0.64 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 2 598068 191111782 1 7 48 0 3 0 0 4 0.03 0.01 5 0 0 5 5 5 5 5 5 26.26 0.32 99.56 0 2 3 Whitelist LIRI-JP 0.62 0.03 0 0 0.33 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 10 0.1 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 3 39163789 184726784 1 5 48 2 2 0 0 1 0.26 0.39 4 0 0 4 3 4 5 3 3 26.26 2.05 97.83 0 2 1 Whitelist LIRI-JP 0.68 0.63 0 0 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 9 0.09 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 4 NA NA 0 0 48 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 5 43921219 43940419 1 1 48 0 0 1 0 0 0.39 0.23 1 0 NA NA NA NA NA NA NA 26.26 99.86 0 0 3 NA Whitelist LIRI-JP 0.62 0.46 0 NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 6 101654062 127649249 1 3 48 3 0 0 0 0 0.03 0.21 1 0 0 NA NA NA NA NA NA 26.26 0 99.86 0 2 NA Whitelist LIRI-JP 0.41 0.44 0 0 0.33 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 7 69555376 69601298 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.26 99.76 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 8 35914936 61020183 1 2 48 0 1 0 1 0 0.57 0.74 4 NA 0 4 4 4 5 4 4 26.26 83.18 13.11 0 2 3 Whitelist LIRI-JP 0.68 0.91 NA 0 0.64 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 9 21980805 22062742 1 1 48 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 4 4 4 26.26 0.91 98.39 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 10 104320516 104707794 2 2 48 0 2 0 0 0 0.11 0.28 1 0 0 NA NA NA NA NA NA 26.26 99.82 0 0 3 NA Whitelist LIRI-JP 0.54 0.53 0 0 0.48 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 11 66402942 67092928 1 1 48 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 26.26 0.51 99.06 0 2 3 Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 12 6694310 6923363 1 1 48 0 0 0 1 0 0.39 0.07 1 0.01 NA NA NA NA 5 3 3 26.26 0.36 99.56 0 3 NA Whitelist LIRI-JP 0.62 0.21 0.01 NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 13 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 14 73636275 74243087 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 26.26 0.57 95.73 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 15 NA NA 0 0 48 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 17 28131195 28824272 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.26 0.85 99.15 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 18 NA NA 0 0 48 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 19 41214979 41727702 1 1 48 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 26.26 0.87 98.96 0 2 3 Whitelist LIRI-JP 0.62 0.48 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 20 39665852 40210154 1 1 48 0 1 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 26.26 99.03 0 0 3 4 Whitelist LIRI-JP 0.62 0.24 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK050 X 9627946 9679184 1 1 48 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 26.26 0.03 99.97 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK050 LIRI 0.5 2.41 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45159 RK050 male alive C22 65 1470 NA NA Included Liver-HCC LIRI JP 1 48.36 LIRI-JP::RK051 1 180288065 180314918 1 1 15 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 26.21 0.01 99.99 0 1 2 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 2 0.07 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 6 NA NA 0 0 15 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.05 0 NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 7 NA NA 0 0 15 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 9 80532521 80543148 1 1 15 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 26.21 0.01 99.83 0 1 2 Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 2 0.07 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 12 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 15 50400580 50493938 1 1 15 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 26.21 0.09 99.91 0 2 3 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 2 0.07 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 17 17327634 19906538 1 2 15 0 1 1 0 0 0.57 0.06 4 NA 0 4 4 4 6 6 6 26.21 24.63 75.36 0 1 2 Whitelist LIRI-JP 0.68 0.19 NA 0 0.64 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 4 0.13 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 18 NA NA 0 0 15 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK051 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK051 LIRI 0.71 2.12 Liver-HCC NA 0 0 frameshift_insertion,17_7578397_G_-,CN:1 2 LIRI-JP DO45161 RK051 male deceased C22 74 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK052 1 153737787 191380173 1 2 34 2 0 0 0 0 0.11 0.34 2 0 0 NA NA NA 4 3 3 37.9 42.26 57.73 0 4 5 Whitelist LIRI-JP 0.54 0.59 0 0 0.48 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 2 103289798 178164094 1 2 34 1 1 0 0 0 0.57 0.76 4 0 0 4 3 4 5 3 3 37.9 0.03 99.87 0 2 1 Whitelist LIRI-JP 0.68 0.93 0 0 0.64 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 3 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 4 70439303 71066272 1 1 34 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 37.9 0.33 99.65 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 5 100995281 101019198 1 1 34 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 37.9 99.85 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 7 138633286 140752367 11 12 34 1 3 2 5 1 0.36 0 4 0 0 4 3 4 4 3 3 37.9 99.77 0 0 3 1 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 23 0.34 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 8 10601236 76462993 1 2 34 2 0 0 0 0 0.11 0.09 2 0 0 NA NA NA NA NA NA 37.9 96.58 0 0 1 5 Whitelist LIRI-JP 0.54 0.25 0 0 0.48 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 9 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 10 11807390 11898730 1 1 34 0 1 0 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 37.9 0.07 99.75 0 2 3 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 13 94408455 94920284 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37.9 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 15 NA NA 0 0 34 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 17 NA NA 0 0 34 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 19 3378203 3454585 1 1 34 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 37.9 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 22 NA NA 0 0 34 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK052 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK052 LIRI 0.91 2.48 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45163 RK052 male alive C22 76 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK053 1 98071526 98156179 2 2 81 2 0 0 0 0 0.11 0.68 3 0 0 NA NA NA 6 5 5 29.33 42.6 57.39 0 2 1 Whitelist LIRI-JP 0.54 0.88 0 0 0.48 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 2 220310994 220533261 2 2 81 1 0 1 0 0 0.57 0.11 1 0 0 NA NA NA 7 5 5 29.33 0.17 99.73 0 2 NA Whitelist LIRI-JP 0.68 0.28 0 0 0.64 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 3 60740057 188119821 1 8 81 7 1 0 0 0 0 0.18 10 0 0 10 10 10 11 11 11 29.33 0.24 99.62 0 1 2 Whitelist LIRI-JP 0.06 0.4 0 0 0.04 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 16 0.1 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 4 69643801 69905561 1 2 81 0 0 1 1 0 0.57 0.66 1 0 0 NA NA NA NA NA NA 29.33 7.59 92.4 0 2 NA Whitelist LIRI-JP 0.68 0.87 0 0 0.64 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 5 21046599 154624026 1 4 81 2 0 1 0 1 0.3 0.82 4 0.01 0 4 3 4 4 3 3 29.33 23.51 76.36 1 2 1 Whitelist LIRI-JP 0.54 0.96 0.01 0 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 7 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 6 86636545 142111021 1 2 81 1 0 0 1 0 0.57 0.24 2 NA 0 NA NA NA NA NA NA 29.33 0.31 99.55 0 1 2 Whitelist LIRI-JP 0.68 0.48 NA 0 0.64 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 7 40506777 81894618 1 4 81 2 1 0 1 0 0.57 0.04 3 0 0 NA NA NA 5 4 4 29.33 99.78 0 0 3 4 Whitelist LIRI-JP 0.68 0.14 0 0 0.64 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 8 0.05 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 8 47774843 128503727 1 4 81 2 0 0 2 0 0.26 1 4 0 0 4 4 4 4 4 4 29.33 66.93 29.64 0 2 3 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 8 0.05 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 9 11198610 26273994 1 3 81 2 0 0 1 0 0.3 0.56 6 0 0 6 3 6 7 4 4 29.33 5.01 94.3 0 1 2 Whitelist LIRI-JP 0.62 0.79 0 0 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 6 0.04 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 10 16687865 17015132 2 2 81 0 0 1 1 0 0.57 0.1 4 0 0 4 4 4 8 7 8 29.33 98.89 1.03 0 2 3 Whitelist LIRI-JP 0.68 0.27 0 0 0.64 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 11 81430157 81443758 1 1 81 0 0 1 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 29.33 0.43 99.01 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 12 111739681 111756501 1 1 81 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 29.33 15.22 84.7 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 13 NA NA 0 0 81 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 14 38134388 38448778 2 2 81 2 0 0 0 0 0.11 0.74 3 NA 0 NA NA NA 4 4 4 29.33 35.77 63.32 0 2 1 Whitelist LIRI-JP 0.54 0.91 NA 0 0.48 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 15 NA NA 0 0 81 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 16 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 17 70816910 70932012 1 1 81 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 29.33 27.47 68.08 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 18 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 19 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 20 NA NA 0 0 81 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 5 0 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.49 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 21 36890977 36968986 1 1 81 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 29.33 0.16 77.19 0 1 2 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 22 NA NA 0 0 81 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK053 X NA NA 0 0 81 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK053 LIRI 0.92 2.04 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577574_C_T,CN:1 2 LIRI-JP DO23513 RK053 male alive C22 76 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK054 1 59948813 196397962 1 2 31 2 0 0 0 0 0.11 0.03 6 0 0 6 3 4 9 3 6 93.94 97.01 0.01 0 4 7 Whitelist LIRI-JP 0.54 0.12 0 0 0.48 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 4 0.06 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 2 141107599 141880883 1 2 31 2 0 0 0 0 0.11 0.74 4 0 0 4 4 4 6 5 6 93.94 97.31 0 0 4 5 Whitelist LIRI-JP 0.54 0.91 0 0 0.48 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 4 0.06 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 3 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 4 174028172 174219899 1 1 31 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 93.94 99.98 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 5 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 6 NA NA 0 0 31 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 10 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 0 NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 7 NA NA 0 0 31 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 8 49980534 79303669 3 3 31 1 2 0 0 0 0.3 0 7 0 0 7 3 5 11 3 5 93.94 96.02 0 0 15 16 Whitelist LIRI-JP 0.62 0.01 0 0 0.59 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 6 0.1 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 9 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 10 43917836 43934472 1 1 31 0 1 0 0 0 0.39 0.05 3 0 0 NA NA NA 5 5 5 93.94 99.82 0 0 3 4 Whitelist LIRI-JP 0.62 0.17 0 0 0.59 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 11 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 13 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 14 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 15 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 17 18581922 20518930 1 1 31 0 0 1 0 0 0.39 0.05 2 NA NA NA NA NA 9 3 3 93.94 95.41 0.1 0 4 16 Whitelist LIRI-JP 0.62 0.17 NA NA 0.59 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 18 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 20 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK054 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK054 LIRI 0.26 4.6 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45165 RK054 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK055 1 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 2 NA NA 0 0 18 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 3 104830887 104847983 1 1 18 0 0 1 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 4.95 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 4 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 6 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 7 13535330 13551477 1 1 18 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.95 0 99.74 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 8 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 11 58565241 81443813 1 2 18 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 4.95 0 99.57 0 2 NA Whitelist LIRI-JP 0.68 0.04 0 0 0.64 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 12 NA NA 0 0 18 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 13 NA NA 0 0 18 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 14 49704997 49720262 1 1 18 0 0 1 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 4.95 0 84.08 0 2 NA Whitelist LIRI-JP 0.62 0.28 NA NA 0.59 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 2 0.06 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 15 NA NA 0 0 18 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 19 NA NA 0 0 18 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 20 NA NA 0 0 18 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK055 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK055 LIRI 0.64 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45167 RK055 male deceased C22 67 1440 NA NA Included Liver-HCC LIRI JP 1 47.37 LIRI-JP::RK056 1 228193691 241285156 1 3 351 2 1 0 0 0 0.3 0 5 0 0 5 5 5 7 7 7 32 32.65 67.35 0 2 3 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 2 141659581 142174015 2 4 351 4 0 0 0 0 0.01 0 10 0 0 10 4 9 12 4 5 32 0.34 99.55 0 1 0 Whitelist LIRI-JP 0.21 0.02 0 0 0.16 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 8 0.01 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 3 16753698 175920076 1 4 351 1 0 1 2 0 0.57 0.05 3 0 0 NA NA NA NA NA NA 32 99.85 0.01 0 3 2 Whitelist LIRI-JP 0.68 0.15 0 0 0.64 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 8 0.01 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 4 NA NA 0 0 351 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 5 NA NA 0 0 351 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.22 0 NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 6 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 7 9935333 143828424 1 4 351 1 0 2 1 0 0.57 0.07 3 0 0 NA NA NA NA NA NA 32 99.73 0.05 0 3 2 Whitelist LIRI-JP 0.68 0.22 0 0 0.64 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 8 0.01 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 8 197777 146291756 213 214 351 53 57 48 55 1 0.84 0 265 0 0 265 7 17 266 7 17 32 96.53 0 0 4 9 Whitelist LIRI-JP 0.87 0 0 0 0.88 1 High confidence LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC With other complex events 427 0.61 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 9 111723938 112015194 1 1 351 0 1 0 0 0 0.39 0 3 NA NA NA NA NA 5 3 3 32 11.49 87.78 0 1 2 Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 2 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 10 NA NA 0 0 351 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 0 NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 11 9910576 10227968 1 1 351 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA NA NA NA 32 0.24 99.3 0 1 2 Whitelist LIRI-JP 0.62 0.06 0 NA 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 2 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 12 87400364 87416693 1 1 351 0 0 0 1 0 0.39 0 1 0 NA NA NA NA NA NA NA 32 0.01 99.91 0 2 NA Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 2 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 13 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 14 43241378 43266517 1 1 351 0 0 0 1 0 0.39 0.44 1 0 NA NA NA NA NA NA NA 32 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 0.69 0 NA 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 2 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 15 NA NA 0 0 351 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 16 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 17 NA NA 0 0 351 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 18 NA NA 0 0 351 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 19 5494125 21417587 6 7 351 2 0 2 2 1 0.57 0.44 15 0 0 15 3 5 17 3 5 32 83.47 9.26 0 3 1 Whitelist LIRI-JP 0.68 0.69 0 0 0.64 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 13 0.02 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 20 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 21 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 22 25820293 36782162 1 2 351 1 1 0 0 0 0.57 0.45 3 NA 0 NA NA NA NA NA NA 32 0.1 99.9 0 2 1 Whitelist LIRI-JP 0.68 0.7 NA 0 0.64 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK056 X 20199972 20230299 1 1 351 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 32 100 0 0 1 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK056 LIRI 0.79 2.25 Liver-HCC NA 2 0 NA 2 LIRI-JP DO45169 RK056 male alive C22 74 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK057 1 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 2 81834797 81846473 1 1 40 0 0 1 0 0 0.39 0.58 1 0 NA NA NA NA NA NA NA 8.99 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.8 0 NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 3 96248234 118332401 1 2 40 0 0 2 0 0 0.11 0.76 1 0 0 NA NA NA NA NA NA 8.99 0 99.88 0 2 NA Whitelist LIRI-JP 0.54 0.92 0 0 0.48 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 4 22257886 69896635 1 3 40 0 0 1 2 0 0.3 0.75 1 0 0 NA NA NA NA NA NA 8.99 0.04 99.76 0 2 NA Whitelist LIRI-JP 0.62 0.92 0 0 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 5 NA NA 0 0 40 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 6 112706636 112724881 1 1 40 0 0 0 1 0 0.39 0.73 1 0 NA NA NA NA NA NA NA 8.99 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.91 0 NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 7 9931373 143828257 1 2 40 0 0 1 1 0 0.57 1 1 NA 0.06 NA NA NA NA NA NA 8.99 0 99.78 0 2 NA Whitelist LIRI-JP 0.68 1 NA 0.06 0.64 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 8 40902760 106931079 1 2 40 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA NA NA NA 8.99 76.26 23.74 0 2 3 Whitelist LIRI-JP 0.68 0.17 0 0 0.64 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 9 2373185 22056370 1 2 40 1 0 1 0 0 0.57 0.07 3 0.11 0 NA NA NA NA NA NA 8.99 0.06 99.24 0 2 1 Whitelist LIRI-JP 0.68 0.21 0.12 0 0.64 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 11 116874442 116886759 1 1 40 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 8.99 0.01 99.59 0 1 2 Whitelist LIRI-JP 0.62 0.05 0 NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 13 68279701 68297267 1 1 40 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.99 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 15 87547592 87562333 1 1 40 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.99 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 16 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 17 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 18 46659651 46758847 1 1 40 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 8.99 0.13 99.84 0 1 2 Whitelist LIRI-JP 0.62 0.54 NA NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 19 NA NA 0 0 40 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 20 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK057 X 104023990 104145692 1 1 40 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 8.99 0.09 99.91 0 1 NA Whitelist LIRI-JP 0.62 0.34 0 NA 0.59 0 No LIRI-JP RK057 LIRI 0.56 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23514 RK057 male alive C22 64 1290 NA NA Included Liver-HCC LIRI JP 1 42.43 LIRI-JP::RK058 1 225845453 243086188 1 2 33 1 1 0 0 0 0.57 0.74 4 0 0 4 3 4 8 3 3 24.61 41.59 58.41 0 4 3 Whitelist LIRI-JP 0.68 0.91 0 0 0.64 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 2 201534526 211740427 1 2 33 1 1 0 0 0 0.57 0.75 4 0 0 4 3 4 5 3 3 24.61 0.09 99.8 0 2 1 Whitelist LIRI-JP 0.68 0.92 0 0 0.64 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 3 179686754 179699623 1 1 33 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA NA NA NA 24.61 0.01 99.96 0 1 2 Whitelist LIRI-JP 0.62 0.75 0 NA 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 4 37148911 69905686 1 2 33 0 0 2 0 0 0.11 0.07 1 0 0 NA NA NA NA NA NA 24.61 0 99.99 0 2 NA Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 5 141172139 141280090 1 1 33 1 0 0 0 0 0.39 0.46 3 NA 0 NA NA NA 5 0 3 24.61 99.83 0.03 0 1 2 Whitelist LIRI-JP 0.62 0.7 NA 0 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 7 137687809 137735909 1 1 33 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 24.61 99.78 0 0 3 4 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 8 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 9 5191984 140225754 1 2 33 0 1 0 1 0 0.57 0.37 1 NA 0.04 NA NA NA NA NA NA 24.61 0 99.83 0 2 NA Whitelist LIRI-JP 0.68 0.62 NA 0.04 0.64 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 10 75190349 97182232 2 2 33 0 0 1 1 0 0.57 0.19 1 0 0 NA NA NA NA NA NA 24.61 99.82 0 0 3 NA Whitelist LIRI-JP 0.68 0.41 0 0 0.64 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 11 NA NA 0 0 33 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 12 78844377 78870511 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.61 0.02 99.9 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 13 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 15 90208110 90458965 1 1 33 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 24.61 0.24 99.76 0 2 3 Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 17 73661034 73881342 1 1 33 0 1 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 24.61 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 21 NA NA 0 0 33 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK058 X NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK058 LIRI 0.69 2.27 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45171 RK058 male alive C22 56 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK059 1 37035249 154976561 1 4 32 0 2 0 1 1 0.3 0.1 5 0 0 5 3 5 8 4 4 21.83 41.89 58.1 0 3 2 Whitelist LIRI-JP 0.68 0.27 0 0 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 7 0.11 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 2 85821135 85853037 1 1 32 0 1 0 0 0 0.39 0.75 1 NA NA NA NA NA NA NA NA 21.83 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.92 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 4 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 5 140966047 141010277 1 1 32 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 21.83 0.02 99.84 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 6 43066074 74664178 1 2 32 2 0 0 0 0 0.11 0.01 5 0 0 5 3 5 10 5 5 21.83 99.87 0 0 4 1 Whitelist LIRI-JP 0.54 0.05 0 0 0.48 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 7 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 8 NA NA 0 0 32 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.22 NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 9 6672490 131206070 1 3 32 1 2 0 0 0 0.3 0.13 4 0.6 0 4 3 4 5 3 3 21.83 0.16 99.13 0 2 1 Whitelist LIRI-JP 0.62 0.32 0.6 0 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 11 118961536 119084985 1 1 32 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 21.83 0.23 99.22 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 12 105592360 108050207 1 1 32 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 21.83 1.84 98.08 0 1 2 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 14 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 15 85353633 85647808 1 1 32 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 21.83 0.29 99.71 0 2 3 Whitelist LIRI-JP 0.62 0.45 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 16 20519118 20578253 1 1 32 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA 4 3 3 21.83 57.34 37.55 0 2 3 Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 17 15998021 27855275 1 2 32 2 0 0 0 0 0.11 0.21 4 NA 0 4 4 4 4 4 4 21.83 27.43 72.51 0 1 2 Whitelist LIRI-JP 0.54 0.44 NA 0 0.48 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 20 49284533 49302017 2 2 32 0 0 1 1 0 0.57 0.15 1 NA 0 NA NA NA NA NA NA 21.83 0 99.06 0 2 NA Whitelist LIRI-JP 0.68 0.35 NA 0 0.64 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK059 X NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK059 LIRI 0.76 2.14 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48672 RK059 male alive C22 81 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK060 1 NA NA 0 0 34 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 2 142147834 142391964 1 1 34 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 57.99 99.89 0 0 1 3 Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 3 34942309 81422565 2 5 34 0 0 1 1 3 0.57 0 5 0 0 5 3 4 17 6 6 57.99 61.08 35.77 0 4 1 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 7 0.1 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 4 185150265 186282224 1 1 34 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA NA NA NA 57.99 0.59 99.39 0 0 2 Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 6 NA NA 0 0 34 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 7 2747658 146674755 1 2 34 2 0 0 0 0 0.11 0.7 4 NA 0.04 4 3 4 5 3 3 57.99 99.77 0 0 4 3 Whitelist LIRI-JP 0.54 0.9 NA 0.04 0.48 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 8 NA NA 0 0 34 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.49 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 9 108342873 108356953 1 1 34 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 10 6 10 57.99 52.64 44.24 0 1 3 Whitelist LIRI-JP 0.62 0.15 NA NA 0.59 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 10 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 11 106030328 129786699 2 2 34 1 1 0 0 0 0.57 0.67 1 NA 0 NA NA NA NA NA NA 57.99 99.57 0 1 4 NA Whitelist LIRI-JP 0.68 0.87 NA 0 0.64 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 12 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 14 NA NA 0 0 34 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 17 16062578 60500683 2 6 34 1 1 0 0 4 0.57 0 3 0 0 NA NA NA 4 0 0 57.99 91.7 2.98 0 1 3 Whitelist LIRI-JP 0.54 0 0 0 0.64 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 8 0.12 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 18 39264435 39423837 1 1 34 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 57.99 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 19 NA NA 0 0 34 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 20 NA NA 0 0 34 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 21 NA NA 0 0 34 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK060 X NA NA 0 0 34 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK060 LIRI 0.57 2.72 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23515 RK060 male alive C22 71 1230 NA NA Included Liver-HCC LIRI JP 1 40.46 LIRI-JP::RK061 1 97070446 248400321 1 7 229 0 1 3 3 0 0.28 0.81 3 0 0 NA NA NA NA NA NA 23.27 0 99.65 0 2 3 Whitelist LIRI-JP 0.62 0.95 0 0 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 14 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 2 72586015 219139011 1 7 229 2 0 0 3 2 0.14 0.04 3 0 0 NA NA NA NA NA NA 23.27 16.85 83.06 0 2 1 Whitelist LIRI-JP 12 0.62 0.14 0 0 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 12 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 3 1439912 173762045 1 5 229 2 0 3 0 0 0.14 0.03 2 0 0 NA NA NA NA NA NA 23.27 0.01 99.85 0 1 2 Whitelist LIRI-JP 0.62 0.1 0 0 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 4 77966490 113522501 2 2 229 0 1 1 0 0 0.57 0.43 1 0 0 NA NA NA 5 3 3 23.27 71.49 28.5 0 1 NA Whitelist LIRI-JP 0.68 0.68 0 0 0.64 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 5 27652389 168060905 1 7 229 2 0 1 2 2 0.53 0 7 0 0 7 7 7 7 7 7 23.27 0.16 99.72 0 2 1 Whitelist LIRI-JP 12 0.77 0 0 0 0.64 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 12 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 6 79004870 164064408 1 5 229 1 0 1 1 2 0.8 0.33 3 0 0 NA NA NA NA NA NA 23.27 0.09 99.74 0 2 1 Whitelist LIRI-JP 0.68 0.58 0 0 0.84 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 7 1738702 57285072 28 28 229 7 5 6 10 0 0.57 0 28 0 0 28 6 9 28 6 9 23.27 25.83 71.17 8 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 Low confidence LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC With other complex events 56 0.12 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 8 24743909 48399104 7 10 229 2 1 2 2 3 0.93 0 20 0 0 20 5 9 25 5 6 23.27 92.99 3.38 0 2 1 Whitelist LIRI-JP 0.96 0.02 0 0 0.95 0 Low confidence LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC With other complex events 17 0.04 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 9 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 10 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 11 2069820 2147495 1 1 229 0 0 1 0 0 0.39 0.08 1 0 NA NA NA NA NA NA NA 23.27 0 99.57 0 2 NA Whitelist LIRI-JP 0.62 0.23 0 NA 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 12 1341105 26962665 1 10 229 2 1 3 1 3 0.67 0.27 12 0 0 12 6 10 14 8 8 23.27 18.96 80.96 2 3 2 Whitelist LIRI-JP 5 0.96 0.52 0 0 0.74 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 17 0.04 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 13 101269093 101291883 1 1 229 1 0 0 0 0 0.39 0.86 2 0 NA NA NA NA NA NA NA 23.27 0.02 99.98 0 1 2 Whitelist LIRI-JP 0.62 0.99 0 NA 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 14 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 15 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 16 361249 57778328 1 10 229 0 3 1 0 6 0.11 0.02 14 0 0 14 6 6 16 6 6 23.27 32.64 62.24 0 2 3 Whitelist LIRI-JP 0.62 0.09 0 0 0.48 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 14 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 17 5846153 5998623 1 1 229 0 0 1 0 0 0.39 1 2 0 NA NA NA NA 7 5 5 23.27 16.64 83.34 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 18 18967120 19143724 2 2 229 0 0 1 1 0 0.57 0.3 3 0 0 NA NA NA NA NA NA 23.27 0.15 99.82 0 2 1 Whitelist LIRI-JP 0.68 0.55 0 0 0.64 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 19 19036240 19093804 1 1 229 0 1 0 0 0 0.39 0.47 2 0 NA NA NA NA 11 3 4 23.27 37.32 55.41 0 5 6 Whitelist LIRI-JP 0.62 0.71 0 NA 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 20 NA NA 0 0 229 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.27 NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 21 19784237 19803285 1 1 229 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 23.27 0.04 70.06 0 1 2 Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 22 NA NA 0 0 229 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK061 X NA NA 0 0 229 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 0 No LIRI-JP RK061 LIRI 0.82 1.85 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO45173 RK061 male alive C22 63 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK062 1 19322580 235335620 1 3 31 1 2 0 0 0 0.3 0.73 9 0.04 0 9 4 7 9 4 4 18.02 52.2 47.62 0 2 3 Whitelist LIRI-JP 0.62 0.91 0.04 0 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 6 0.1 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 2 103979316 104043054 1 1 31 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 18.02 0.03 99.87 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 3 NA NA 0 0 31 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 4 104630720 185100401 3 7 31 1 0 1 1 4 0.8 0 8 0 0 8 8 8 10 10 10 18.02 1.23 98.55 0 1 2 Whitelist LIRI-JP 0.77 0.02 0 0 0.84 1 High confidence LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC Canonical without polyploidization 10 0.16 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 5 103550129 103617456 1 1 31 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 18.02 0.04 99.84 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 6 18118737 168782574 1 7 31 1 1 1 0 4 0.8 0 10 0 0 10 4 6 10 4 6 18.02 83.47 16.39 0 1 2 Whitelist LIRI-JP 0.68 0.01 0 0 0.84 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 10 0.16 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 7 99752169 99813431 1 1 31 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.02 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 8 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 9 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 10 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 11 22773723 22965709 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.02 0.14 99.42 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 12 47414677 69556175 2 2 31 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 8 8 8 18.02 10.5 89.41 0 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 13 68182663 68217646 1 1 31 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.02 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 14 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 15 51184186 51256996 1 1 31 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 18.02 0.07 99.78 0 2 3 Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 17 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 18 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 20 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 22 46500654 46595225 1 1 31 0 1 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 18.02 0.18 99.82 0 2 3 Whitelist LIRI-JP 0.62 0.56 NA NA 0.59 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK062 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK062 LIRI 0.88 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45175 RK062 male alive C22 74 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK063 1 93146093 108083639 2 4 22 1 1 0 0 2 0.57 0.09 5 0 0 5 5 5 6 5 5 10.29 51.75 45.2 0 2 1 Whitelist LIRI-JP 0.62 0.25 0 0 0.64 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 6 0.14 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 2 46224596 161288004 4 4 22 0 1 2 1 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 10.29 0 99.89 0 2 NA Whitelist LIRI-JP 0.68 0.12 0 0 0.64 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 8 0.18 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 4 96521696 96540574 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.29 0.01 99.81 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 5 NA NA 0 0 22 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 6 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 7 11266416 11534971 1 1 22 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.29 99.77 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 8 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 10 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 11 NA NA 0 0 22 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.23 NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 12 24631628 24705542 1 1 22 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 10.29 0.06 99.86 0 1 2 Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 15 53611450 53893464 1 1 22 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 10.29 0.28 99.72 0 2 3 Whitelist LIRI-JP 0.62 0.71 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 16 70477928 70725955 1 1 22 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 10.29 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 17 44662440 44834601 1 1 22 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 10.29 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 20 14970529 15001627 1 1 22 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 10.29 0 98.99 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK063 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK063 LIRI 0.4 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45177 RK063 female alive C22 81 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK064 1 3092130 9245414 1 1 8 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA 4 3 3 52.47 44.24 55.76 0 1 2 Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 2 0.12 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 2 NA NA 0 0 8 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 4 158194374 158248644 1 1 8 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 52.47 0 99.76 0 2 NA Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 2 0.12 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 7 133074228 133318813 1 1 8 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 8 4 4 52.47 0.6 96.79 0 1 2 Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 2 0.12 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 11 47622436 47738632 1 1 8 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 52.47 99.57 0 0 3 5 Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 2 0.12 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 12 109121800 109353113 1 1 8 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA 5 3 5 52.47 96.26 0 0 3 5 Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 2 0.12 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 13 NA NA 0 0 8 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.48 NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK064 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK064 LIRI 0.84 2.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45179 RK064 female alive C22 78 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK065 1 NA NA 0 0 38 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 2 141281649 141346702 1 2 38 0 0 1 1 0 0.57 0.77 1 NA 0 NA NA NA NA NA NA 4.46 0 99.9 0 2 NA Whitelist LIRI-JP 0.68 0.93 NA 0 0.64 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 3 56668890 58685114 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 4.46 1.02 98.89 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 4 19368281 19384743 1 1 38 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.46 0 99.79 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 5 9892219 24363888 1 1 38 1 0 0 0 0 0.39 0.09 2 0.09 NA NA NA NA 7 4 7 4.46 12.75 87.12 0 1 2 Whitelist LIRI-JP 0.62 0.24 0.09 NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 6 13858997 166555635 5 7 38 2 1 1 1 2 0.9 0.01 1 0 0 NA NA NA NA NA NA 4.46 0 99.76 0 2 NA Whitelist LIRI-JP 0.77 0.03 0 0 0.92 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 12 0.16 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 7 24402516 25650072 1 1 38 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.46 0 99.93 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 8 3761044 125648372 1 5 38 2 0 0 1 2 0.3 0.01 8 0 0 8 8 8 9 9 9 4.46 0.64 99.26 1 1 2 Whitelist LIRI-JP 0.45 0.05 0 0 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 8 0.11 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 9 21635413 133591599 1 3 38 2 0 0 0 1 0.11 0.19 4 NA 0 4 4 4 5 5 5 4.46 32.25 67.08 0 1 2 Whitelist LIRI-JP 0.62 0.4 NA 0 0.48 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 5 0.07 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 10 23596084 23859075 2 9 38 0 0 1 1 7 0.57 0 4 0 0 4 3 4 7 3 3 4.46 0.29 99.53 0 2 1 Whitelist LIRI-JP 0.97 0 0 0 0.64 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 11 0.14 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 11 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 12 131083081 132112749 1 1 38 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA 5 3 3 4.46 1.06 98.86 0 1 2 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 13 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 14 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 16 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 18 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 20 NA NA 0 0 38 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 21 47679588 47924295 1 1 38 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 4.46 0.51 76.42 0 1 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK065 X 151353430 153300156 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 4.46 1.25 98.53 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK065 LIRI 0.82 2.11 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45181 RK065 female alive C22 84 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK066 1 108130307 120475032 2 4 21 0 1 0 1 2 0.57 0.08 5 0 0 5 5 5 6 6 6 21.87 100 0 1 3 1 Whitelist LIRI-JP 0.68 0.22 0 0 0.64 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 6 0.14 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 2 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 3 3439462 3451855 1 1 21 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.87 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 4 22257788 22274904 1 1 21 0 0 1 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 21.87 99.99 0 0 3 NA Whitelist LIRI-JP 0.62 0.37 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 5 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 7 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 8 59706405 69634335 3 3 21 1 1 0 1 0 0.8 0 8 0 0 8 8 8 11 10 10 21.87 98.45 1.55 0 2 3 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 6 0.14 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 9 83129660 83145356 1 1 21 0 0 1 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 21.87 0 99.3 0 2 NA Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 10 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 14 43241455 43266365 1 1 21 0 0 0 1 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 21.87 0 99.08 0 2 NA Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 20 5796296 5828005 1 1 21 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 21.87 0 99.03 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK066 X 72993513 73008370 1 1 21 0 0 1 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 21.87 0 99.78 0 2 NA Whitelist LIRI-JP 0.62 0.53 NA NA 0.59 0 No LIRI-JP RK066 LIRI 0.84 1.96 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45183 RK066 female deceased C22 72 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK067 1 44269676 245339193 141 169 260 30 32 45 34 28 0.28 0 224 0 0 224 10 10 226 10 10 18.84 22.56 74.31 15 8 7 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 High confidence LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC With other complex events 310 0.6 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 2 12842198 142222175 1 11 260 2 0 0 0 9 0.11 0.01 5 0 0 5 5 5 7 7 7 18.84 0.28 99.63 0 2 1 Whitelist LIRI-JP 0.62 0.06 0 0 0.48 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 13 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 3 193755014 193772012 1 1 260 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 18.84 0 99.95 0 2 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 4 79658323 144578032 1 29 260 1 1 0 0 27 0.57 0 26 0 0 26 3 4 28 3 4 18.84 38.21 61.79 0 6 1 Whitelist LIRI-JP 1 0.88 0.02 0 0 0.64 1 Linked to high confidence LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC With other complex events 31 0.06 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 5 NA NA 0 0 260 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 6 24979639 120397686 1 6 260 0 2 1 1 2 0.57 0.43 3 0 0 NA NA NA 7 0 4 18.84 0 99.75 0 1 2 Whitelist LIRI-JP 0.68 0.68 0 0 0.64 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 10 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 7 68954835 80166455 1 2 260 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 18.84 0 99.78 0 2 NA Whitelist LIRI-JP 0.54 0.01 NA 0 0.48 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 8 3814607 3838778 1 1 260 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA 6 4 4 18.84 39.52 60.47 0 1 NA Whitelist LIRI-JP 0.62 0.36 0 NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 9 25065228 32883803 2 2 260 0 1 0 1 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 18.84 0.15 96.77 0 2 NA Whitelist LIRI-JP 0.68 0.5 0 0 0.64 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 10 NA NA 0 0 260 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 11 5388809 104864216 1 14 260 1 1 2 0 10 0.57 0.14 4 0 0 4 4 4 4 4 4 18.84 82.02 17.56 0 1 2 Whitelist LIRI-JP 2 0.81 0.34 0 0 0.64 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 18 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 12 24439568 40781267 1 5 260 3 0 1 0 1 0.11 1 6 0 0 6 3 4 9 4 4 18.84 15.53 84.39 0 2 3 Whitelist LIRI-JP 0.62 1 0 0 0.48 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 9 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 13 77805055 86045394 1 1 260 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 5 5 5 18.84 7.16 92.84 0 1 2 Whitelist LIRI-JP 0.62 0.14 NA NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 14 41524561 41551899 1 1 260 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 5 3 3 18.84 49.6 49.48 0 1 2 Whitelist LIRI-JP 0.62 0.36 0 NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 15 24220356 79498082 1 3 260 1 1 0 1 0 0.8 0.13 1 0 0 NA NA NA NA NA NA 18.84 0 100 0 2 NA Whitelist LIRI-JP 0.87 0.32 0 0 0.84 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 6 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 16 NA NA 0 0 260 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 17 14257062 14271584 1 1 260 0 1 0 0 0 0.39 0.18 2 NA NA NA NA NA 5 4 4 18.84 67.59 27.1 0 1 2 Whitelist LIRI-JP 0.62 0.39 NA NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 18 NA NA 0 0 260 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.05 NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 19 NA NA 0 0 260 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 20 NA NA 0 0 260 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 21 NA NA 0 0 260 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 22 33952905 34146393 1 1 260 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.84 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 2 0 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK067 X 81139234 82000633 2 2 260 0 0 1 1 0 0.57 0.32 1 0 0 NA NA NA NA NA NA 18.84 100 0 0 1 NA Whitelist LIRI-JP 0.68 0.57 0 0 0.64 1 No LIRI-JP RK067 LIRI 0.38 1.86 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:1 2 LIRI-JP DO45185 RK067 male alive C22 89 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK068 1 NA NA 0 0 41 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 2 89223380 219370930 1 3 41 0 0 0 1 2 0.39 0.77 1 NA 0 NA NA NA NA NA NA 28.67 0 99.9 0 2 NA Whitelist LIRI-JP 0.41 0.93 NA 0 0.59 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 3 185628686 185708955 1 1 41 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.67 0 99.97 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 4 185083021 185423750 5 5 41 0 1 2 2 0 0.53 0.02 3 0 0 NA NA NA 4 3 3 28.67 99.99 0 0 1 0 Whitelist LIRI-JP 0.68 0.07 0 0 0.64 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 10 0.12 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 5 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 6 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 7 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 8 NA NA 0 0 41 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.36 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 9 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 10 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 11 10761364 65268375 2 2 41 1 0 0 1 0 0.57 0.12 1 0.15 0 NA NA NA NA NA NA 28.67 0 99.57 0 2 NA Whitelist LIRI-JP 0.68 0.31 0.15 0 0.64 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 12 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 13 68039599 68066524 1 1 41 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 28.67 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.38 NA NA 0.59 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 14 106716691 106727781 1 1 41 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.67 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 15 NA NA 0 0 41 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 16 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 17 10522686 80260533 4 4 41 3 1 0 0 0 0.11 0 9 0.01 0 9 9 9 11 9 9 28.67 13.93 80.08 0 2 3 Whitelist LIRI-JP 0.54 0.03 0.01 0 0.48 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 8 0.1 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 18 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 19 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 20 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 21 20873487 27430481 4 4 41 1 1 0 2 0 0.57 0 6 0 0 6 6 6 6 6 6 28.67 33.81 43.54 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 8 0.1 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 22 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK068 X 18626254 20240117 2 2 41 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 28.67 0.32 99.46 0 2 1 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK068 LIRI 0.77 2.01 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45187 RK068 female alive C22 32 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK069 1 NA NA 0 0 81 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 2 NA NA 0 0 81 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 3 170788309 197801947 57 58 81 16 12 14 15 1 0.89 0 57 0 0 57 8 12 58 8 12 18.31 9.93 89.91 0 3 4 Whitelist LIRI-JP 0.89 0 0 0 0.92 1 High confidence LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC With other complex events 115 0.71 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 4 NA NA 0 0 81 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 5 80363009 80470128 1 1 81 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 18.31 0.06 99.82 0 1 2 Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 6 NA NA 0 0 81 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.48 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 7 NA NA 0 0 81 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 8 NA NA 0 0 81 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 9 NA NA 0 0 81 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 10 NA NA 0 0 81 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 11 NA NA 0 0 81 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 12 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 13 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 14 30741381 31087880 1 1 81 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.31 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 15 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 16 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 17 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 18 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 19 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 20 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 21 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 22 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK069 X 24930828 77789931 2 2 81 1 1 0 0 0 0.57 0.07 3 0 0 NA NA NA 6 4 4 18.31 0.08 99.92 0 2 1 Whitelist LIRI-JP 0.68 0.2 0 0 0.64 1 No LIRI-JP RK069 LIRI 0.84 1.9 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45189 RK069 female alive C22 85 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK070 1 108865294 181513138 3 3 281 0 1 1 1 0 0.8 0.12 12 0 0 12 3 5 48 7 10 33.15 73.3 23.34 0 3 4 Whitelist LIRI-JP 0.87 0.31 0 0 0.84 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 6 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 2 25716199 26193943 3 3 281 0 3 0 0 0 0.03 0.08 1 0 0 NA NA NA 40 10 12 33.15 37.87 59.44 0 3 NA Whitelist LIRI-JP 0.41 0.24 0 0 0.33 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 6 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 3 167036845 167192580 4 4 281 0 1 2 1 0 0.57 0.16 4 0 0 4 0 3 32 7 15 33.15 20.74 79.13 0 3 4 Whitelist LIRI-JP 0.68 0.37 0 0 0.64 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 8 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 4 94956171 136413816 4 5 281 1 0 2 1 1 0.57 0.06 5 0 0 5 5 5 27 12 12 33.15 15.45 84.32 0 2 3 Whitelist LIRI-JP 0.93 0.18 0 0 0.64 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 9 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 5 80021435 173139506 2 4 281 0 4 0 0 0 0.01 0.81 12 0 0 12 3 7 22 9 15 33.15 5.37 91.15 0 2 3 Whitelist LIRI-JP 0.21 0.95 0 0 0.16 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 8 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 6 122677714 165244528 3 5 281 2 1 0 0 2 0.3 1 5 0 0 5 3 4 20 9 10 33.15 16.42 80.62 0 2 1 Whitelist LIRI-JP 4 0.68 1 0 0 0.59 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 8 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 7 17460037 151211984 1 14 281 0 10 0 0 4 0 0.89 25 0 0 25 6 13 26 7 13 33.15 46.86 50.77 0 3 2 Whitelist LIRI-JP 4 0 1 0 0 0 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 24 0.04 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 8 20201649 20382723 2 2 281 0 0 1 1 0 0.57 0.08 3 0 0 NA NA NA 22 9 14 33.15 41.68 58.11 0 2 4 Whitelist LIRI-JP 0.68 0.22 0 0 0.64 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 4 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 9 33227463 119336701 1 7 281 0 6 1 0 0 0 1 9 0 0 9 4 4 14 4 4 33.15 12.73 86.59 0 3 2 Whitelist LIRI-JP 0.13 1 0 0 0.09 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 14 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 10 34566074 125589870 1 13 281 0 4 0 2 7 0.06 0.57 14 0 0 14 10 12 16 10 13 33.15 12.94 86.73 0 2 4 Whitelist LIRI-JP 12_13 0.62 0.79 0 0 0.48 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 19 0.03 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 11 2547255 132275890 1 14 281 1 10 1 0 2 0 0.57 19 0 0 19 7 19 20 7 20 33.15 15.29 84.57 0 2 3 Whitelist LIRI-JP 0.01 0.79 0 0 0.01 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 26 0.05 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 12 5996169 123592649 1 11 281 0 7 0 0 4 0 1 15 0 0 15 5 13 15 5 13 33.15 41.74 58.18 2 2 1 Whitelist LIRI-JP 10 0.17 1 0 0 0.01 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 18 0.03 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 13 45186603 110630510 1 10 281 0 8 0 0 2 0 0.62 18 0 0 18 5 18 19 5 19 33.15 6.11 93.7 0 2 4 Whitelist LIRI-JP 10 0.01 0.84 0 0 0 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 18 0.03 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 14 42648313 96598128 1 5 281 0 5 0 0 0 0 0.23 6 0 0 6 3 6 9 5 9 33.15 1.9 98.1 0 2 3 Whitelist LIRI-JP 0.1 0.47 0 0 0.07 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 10 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 15 30076641 37106962 1 2 281 0 2 0 0 0 0.11 0.03 4 NA 0 4 4 4 5 5 5 33.15 0.25 99.62 0 2 3 Whitelist LIRI-JP 0.54 0.11 NA 0 0.48 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 4 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 16 4752496 63275874 1 10 281 0 5 0 0 5 0 0.35 12 0 0 12 5 12 13 5 13 33.15 27.06 72.78 0 2 3 Whitelist LIRI-JP 0.3 0.6 0 0 0.07 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 15 0.03 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 17 10513767 66696561 1 13 281 1 5 0 2 5 0.07 0.03 16 0 0 16 5 9 19 5 9 33.15 82.97 12.54 0 4 3 Whitelist LIRI-JP 0.32 0.1 0 0 0.48 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 21 0.04 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 18 2560627 42470513 1 7 281 1 3 1 1 1 0.57 1 10 0 0 10 5 7 12 5 7 33.15 47.14 52.67 2 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.64 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 13 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 19 9978905 54935221 1 5 281 1 3 0 0 1 0.11 1 8 0 0 8 5 8 10 5 9 33.15 85.6 7.13 0 4 3 Whitelist LIRI-JP 0.45 1 0 0 0.48 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 9 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 20 20673514 53806999 1 6 281 0 6 0 0 0 0 0.21 9 0 0 9 3 4 13 3 5 33.15 32.69 61.11 0 4 2 Whitelist LIRI-JP 0.04 0.44 0 0 0.03 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 12 0.02 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 21 16204329 16363747 1 1 281 0 1 0 0 0 0.39 0.16 2 0 NA NA NA NA 7 5 7 33.15 1.05 76.3 0 2 3 Whitelist LIRI-JP 0.62 0.37 0 NA 0.59 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 2 0 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 22 19644805 38263280 1 4 281 0 4 0 0 0 0.01 0.58 4 0 0 4 0 4 6 0 4 33.15 86.6 2.29 0 1 2 Whitelist LIRI-JP 0.21 0.8 0 0 0.16 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 8 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK070 X 31799984 92322774 1 3 281 0 3 0 0 0 0.03 0.01 2 0 0 NA NA NA 5 5 5 33.15 99.87 0.13 0 1 2 Whitelist LIRI-JP 0.41 0.04 0 0 0.33 0 No LIRI-JP RK070 LIRI 0.6 2.2 Liver-HCC NA 6 0.01 stopgain,17_7578247_T_A,CN:1 2 LIRI-JP DO48674 RK070 male alive C22 80 1260 NA NA Included Liver-HCC LIRI JP 1 41.45 LIRI-JP::RK071 1 152471542 164031548 3 5 288 1 0 0 2 2 0.3 0.44 1 0 0 NA NA NA NA NA NA 15.17 18.7 81.3 0 2 NA Whitelist LIRI-JP 0.68 0.69 0 0 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 8 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 2 76608168 178213856 1 4 288 0 0 1 2 1 0.3 0.59 1 0 0 NA NA NA NA NA NA 15.17 0 99.9 0 2 NA Whitelist LIRI-JP 0.68 0.81 0 0 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 7 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 3 3439160 180354583 1 9 288 0 0 2 2 5 0.26 0.2 1 0 0 NA NA NA NA NA NA 15.17 0 99.95 0 2 NA Whitelist LIRI-JP 11 0.68 0.43 0 0 0.59 1 Linked to high confidence LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC With other complex events 13 0.02 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 4 57357110 57375153 1 1 288 0 0 0 1 0 0.39 0.91 2 0 NA NA NA NA 6 3 4 15.17 70.44 29.39 0 4 5 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 5 14767699 43467310 2 3 288 2 0 0 0 1 0.11 0.54 1 0 0 NA NA NA NA NA NA 15.17 0 99.86 0 2 NA Whitelist LIRI-JP 0.41 0.77 0 0 0.48 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 5 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 6 62246164 62262024 1 1 288 0 0 1 0 0 0.39 0.38 1 0 NA NA NA NA NA NA NA 15.17 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 7 71578613 118796077 1 6 288 1 0 2 0 3 0.3 0.69 4 0 0 4 3 4 5 3 3 15.17 3.47 96.29 0 3 2 Whitelist LIRI-JP 0.62 0.89 0 0 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 9 0.02 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 8 40000197 113893186 1 9 288 1 0 1 3 4 0.28 0.35 7 0 0 7 5 7 8 6 6 15.17 96.58 0 0 3 1 Whitelist LIRI-JP 0.62 0.6 0 0 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 14 0.02 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 9 NA NA 0 0 288 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 0 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 10 113978772 114003405 1 1 288 0 1 0 0 0 0.39 0.48 2 0 NA NA NA NA NA NA NA 15.17 0.02 99.87 0 2 3 Whitelist LIRI-JP 0.62 0.72 0 NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 11 67544036 101188725 19 26 288 4 8 3 4 7 0.38 0 21 0 0 21 12 12 29 12 12 15.17 42.93 56.65 0 2 3 Whitelist LIRI-JP 0.63 0 0 0 0.59 1 High confidence LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC With other complex events 45 0.08 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 12 10153354 10190656 1 1 288 0 0 1 0 0 0.39 0.48 1 0 NA NA NA NA NA NA NA 15.17 3.25 96.67 0 2 NA Whitelist LIRI-JP 0.62 0.73 0 NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 13 NA NA 0 0 288 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 0 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 14 43241272 43266473 1 1 288 0 0 0 1 0 0.39 1 1 0 NA NA NA NA NA NA NA 15.17 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 15 24570376 37755599 1 2 288 0 1 1 0 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 15.17 0 100 0 2 NA Whitelist LIRI-JP 0.68 0.71 0 0 0.64 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 16 NA NA 0 0 288 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.11 NA NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 17 NA NA 0 0 288 0 0 0 0 0 NA 0.27 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 0 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 18 NA NA 0 0 288 0 0 0 0 0 NA 0.71 NA 0.08 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 0.08 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 19 20075443 58099832 1 3 288 0 0 0 2 1 0.11 0.08 1 0 0 NA NA NA NA NA NA 15.17 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.24 0 0 0.48 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 5 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 20 NA NA 0 0 288 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 21 NA NA 0 0 288 0 0 0 0 0 NA 0.78 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.94 0 NA NA 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 22 40179027 40190674 1 1 288 0 0 1 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 15.17 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.94 NA NA 0.59 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 2 0 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK071 X 83557369 119137613 1 2 288 0 0 0 2 0 0.11 0 1 0 0 NA NA NA NA NA NA 15.17 0 99.79 0 2 NA Whitelist LIRI-JP 0.54 0 0 0 0.48 1 No LIRI-JP RK071 LIRI 0.79 1.96 Liver-HCC NA 4 0.01 NA 3 LIRI-JP DO45191 RK071 female alive C22 61 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK072 1 222011486 245215095 1 3 282 3 0 0 0 0 0.03 0 4 0 0 4 4 4 23 5 5 89.2 100 0 0 4 8 Whitelist LIRI-JP 0.41 0 0 0 0.33 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 6 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 2 220292212 220502258 2 2 282 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 19 5 7 89.2 97.31 0 0 3 4 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 4 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 3 144516195 181561816 52 58 282 13 13 14 12 6 0.98 0 67 0 0 67 4 10 70 5 8 89.2 99.99 0 0 8 4 Whitelist LIRI-JP 0.86 0 0 0 0.99 0 Low confidence LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC With other complex events 110 0.2 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 4 1839771 97609267 1 3 282 1 0 1 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 89.2 99.91 0.08 0 3 2 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 6 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 5 126727712 180650813 177 177 282 50 60 30 37 0 0.01 0 171 0 0 171 17 19 174 17 19 89.2 83.61 13.69 0 3 2 Whitelist LIRI-JP 0.21 0 0 0 0.16 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 354 0.63 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 6 116221862 116240745 1 1 282 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 3 3 89.2 99.76 0 0 5 6 Whitelist LIRI-JP 0.62 0 NA NA 0.59 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 2 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 7 110302559 110786519 1 1 282 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 10 3 3 89.2 97.22 0 0 6 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 2 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 8 21160192 121548276 1 3 282 3 0 0 0 0 0.03 0 7 0 0 7 3 4 8 3 4 89.2 96.47 0 0 6 1 Whitelist LIRI-JP 0.41 0.01 0 0 0.33 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 6 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 9 NA NA 0 0 282 0 0 0 0 0 NA 0 NA NA NA NA NA NA 8 4 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 10 NA NA 0 0 282 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 11 65824959 124830450 1 2 282 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 15 3 4 89.2 96.51 0 0 4 3 Whitelist LIRI-JP 0.54 0.03 0 0 0.48 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 4 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 12 NA NA 0 0 282 0 0 0 0 0 NA 0 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 13 NA NA 0 0 282 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 14 27797434 27808982 1 1 282 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 89.2 99.09 0 0 3 NA Whitelist LIRI-JP 0.62 0.02 NA NA 0.59 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 2 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 15 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 16 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 17 20816674 20985095 1 1 282 0 1 0 0 0 0.39 0.1 2 0 NA NA NA NA 7 3 3 89.2 69.97 24.98 0 4 8 Whitelist LIRI-JP 0.62 0.26 0 NA 0.59 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 2 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 18 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 19 NA NA 0 0 282 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 0 NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 20 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 21 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 22 NA NA 0 0 282 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 0 0 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK072 X 74565389 132763706 1 2 282 1 0 0 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 89.2 64.29 35.48 0 4 NA Whitelist LIRI-JP 0.68 0.01 0 0 0.64 0 No LIRI-JP RK072 LIRI 0.7 4.49 Liver-HCC NA 4 0.01 stopgain,17_7578492_T_C,CN:2 4 LIRI-JP DO45193 RK072 female deceased C22 68 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK073 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 16 NA NA 0 0 1 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.1 NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK073 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK073 LIRI 0.32 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45195 RK073 male alive C22 62 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK074 1 156054810 217675381 1 5 67 2 1 0 0 2 0.3 0.11 6 0 0 6 3 6 10 3 4 23.14 42.33 57.67 0 4 5 Whitelist LIRI-JP 0.62 0.28 0 0 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 2 74168325 74179813 1 1 67 1 0 0 0 0 0.39 0.37 1 0 NA NA NA NA NA NA NA 23.14 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 3 NA NA 0 0 67 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 4 94980887 184170341 1 2 67 1 1 0 0 0 0.57 0.63 3 0 0 NA NA NA 4 3 3 23.14 5.54 94.44 0 1 2 Whitelist LIRI-JP 0.68 0.84 0 0 0.64 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 5 111378233 113949001 9 9 67 2 1 3 3 0 0.75 0 2 0 0 NA NA NA 7 3 3 23.14 2.49 97.39 0 1 2 Whitelist LIRI-JP 0.85 0.01 0 0 0.83 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 18 0.13 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 6 51393431 170191495 1 3 67 2 1 0 0 0 0.3 1 7 0 0 7 4 5 12 4 5 23.14 67.37 29.43 0 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 7 126883602 141349964 1 2 67 1 1 0 0 0 0.57 0.41 2 0 0 NA NA NA 7 5 6 23.14 96.99 0 0 3 4 Whitelist LIRI-JP 0.68 0.66 0 0 0.64 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 8 115941341 116072069 1 1 67 0 1 0 0 0 0.39 0.58 2 0 NA NA NA NA 7 5 5 23.14 96.47 0 0 6 7 Whitelist LIRI-JP 0.62 0.81 0 NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 9 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 10 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 11 56122792 70682359 1 8 67 2 1 0 0 5 0.3 0 4 0 0 4 3 4 6 3 3 23.14 16.43 83.14 0 2 1 Whitelist LIRI-JP 12 0.54 0.02 0 0 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 11 0.08 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 12 23730350 114384826 1 7 67 1 2 0 0 4 0.3 0.04 6 0 0 6 5 6 6 5 5 23.14 20.6 79.32 0 2 3 Whitelist LIRI-JP 0.54 0.13 0 0 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 10 0.07 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 13 NA NA 0 0 67 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 14 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 15 65384094 86582797 1 5 67 0 2 0 0 3 0.11 0.04 7 0 0 7 5 7 8 5 5 23.14 30.59 69.41 0 3 4 Whitelist LIRI-JP 0.1 0.13 0 0 0.48 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 7 0.05 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 16 72798655 72821773 1 1 67 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA NA NA NA 23.14 0.03 99.88 0 1 2 Whitelist LIRI-JP 0.62 0.27 0 NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 17 80641721 80685199 1 1 67 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 23.14 1.09 98.27 0 2 NA Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 18 12821056 13194155 1 1 67 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA 4 3 3 23.14 0.94 99.04 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 19 14385105 35639355 1 2 67 1 1 0 0 0 0.57 0.15 1 0 0 NA NA NA NA NA NA 23.14 0 99.83 0 2 NA Whitelist LIRI-JP 0.68 0.34 0 0 0.64 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 20 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 21 32909894 33076536 1 1 67 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 5 4 4 23.14 32.3 45.51 0 1 2 Whitelist LIRI-JP 0.62 0.42 NA NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 22 42554227 43316959 1 1 67 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 23.14 1.49 98.51 0 2 3 Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK074 X 9564461 131577858 1 4 67 1 1 0 0 2 0.57 0.58 4 0.02 0 4 4 4 4 4 4 23.14 61.06 38.94 0 1 2 Whitelist LIRI-JP 0.68 0.8 0.02 0 0.64 0 No LIRI-JP RK074 LIRI 0.97 2.19 Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO23516 RK074 male deceased C22 69 20 NA NA Included Liver-HCC LIRI JP 1 0.66 LIRI-JP::RK075 1 161789971 161888653 2 2 122 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 8 3 3 14.52 41.86 58.14 0 3 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 2 70315462 240893780 1 14 122 4 2 1 0 7 0.17 0.01 17 0 0 17 12 17 19 13 13 14.52 0.74 99.15 0 2 1 Whitelist LIRI-JP 7 0.54 0.04 0 0 0.59 1 Linked to high confidence LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC Canonical without polyploidization 21 0.09 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 3 48696203 158191237 1 5 122 4 0 0 0 1 0.01 0.28 8 0 0 8 8 8 9 9 9 14.52 0.33 99.48 0 1 2 Whitelist LIRI-JP 0.45 0.53 0 0 0.16 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 9 0.04 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 4 155445616 155665019 2 2 122 0 1 1 0 0 0.57 0.47 4 0 0 4 4 4 10 5 5 14.52 6.37 93.39 0 2 3 Whitelist LIRI-JP 0.68 0.71 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 5 89251454 125728032 1 3 122 2 1 0 0 0 0.3 0.26 6 0 0 6 4 6 7 5 5 14.52 0.11 99.75 0 2 1 Whitelist LIRI-JP 0.62 0.5 0 0 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 6 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 6 30227112 31442416 3 3 122 2 1 0 0 0 0.3 0.7 4 0 0 4 4 4 13 13 13 14.52 0.78 99.08 0 1 2 Whitelist LIRI-JP 0.62 0.9 0 0 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 6 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 7 110056465 157254694 8 18 122 3 1 3 1 10 0.57 0 32 0 0 32 19 32 34 19 19 14.52 42.76 57.01 0 3 2 Whitelist LIRI-JP 2 0.68 0 0 0 0.64 1 High confidence LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC With other complex events 26 0.11 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 8 96829637 96917203 2 2 122 0 0 1 1 0 0.57 0.68 1 0 0 NA NA NA 9 5 6 14.52 88.4 11.48 0 3 NA Whitelist LIRI-JP 0.68 0.88 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 9 88402180 108492507 1 1 122 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 4 3 3 14.52 14.36 84.99 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 10 78338808 78387753 1 1 122 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 6 6 6 14.52 6.38 93.45 0 1 2 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 11 115057746 115205373 2 2 122 0 0 1 1 0 0.57 0.67 4 0 0 4 4 4 13 5 5 14.52 9.57 86.72 0 0 1 Whitelist LIRI-JP 0.68 0.87 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 12 38231626 38314438 2 2 122 1 1 0 0 0 0.57 1 2 0 0 NA NA NA 5 3 5 14.52 0.16 99.76 1 2 4 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 13 105197433 105263769 1 1 122 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 14.52 0.06 99.94 0 1 2 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 14 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 15 29730936 54976185 1 3 122 3 0 0 0 0 0.03 1 6 0 0 6 4 6 7 4 4 14.52 17.38 82.62 0 1 2 Whitelist LIRI-JP 0.41 1 0 0 0.33 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 6 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 16 72507788 84119464 1 2 122 2 0 0 0 0 0.11 0.78 2 NA 0 NA NA NA NA NA NA 14.52 0.38 99.52 0 1 2 Whitelist LIRI-JP 0.54 0.93 NA 0 0.48 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 17 30574219 30988577 3 4 122 1 1 1 0 1 0.8 0.15 4 0 0 4 4 4 9 5 5 14.52 1.59 98.35 0 2 3 Whitelist LIRI-JP 0.68 0.35 0 0 0.84 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 7 0.03 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 18 7174414 7194115 1 1 122 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 14.52 0.03 99.94 0 1 2 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 19 14060770 33633581 1 2 122 0 1 0 1 0 0.57 0.31 2 0 0 NA NA NA NA NA NA 14.52 19.73 80.09 0 2 3 Whitelist LIRI-JP 0.68 0.56 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 20 17745644 35752480 1 2 122 1 1 0 0 0 0.57 0.34 3 0 0 NA NA NA 4 3 3 14.52 6 93.75 0 2 1 Whitelist LIRI-JP 0.68 0.59 0 0 0.64 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 21 24196545 33051020 1 2 122 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 5 5 14.52 0.43 77.37 0 1 2 Whitelist LIRI-JP 0.54 0.87 NA 0 0.48 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 22 27069730 29326840 1 1 122 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.52 4.4 95.6 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK075 X 128160157 128179716 1 1 122 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 4 4 14.52 37.43 59.41 0 1 2 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 1 No LIRI-JP RK075 LIRI 0.39 2.02 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO23517 RK075 male alive C22 62 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK076 1 93274105 93586386 1 1 31 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.27 48.28 48.74 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 2 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 3 188124138 188285512 1 1 31 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 19.27 0.08 99.89 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 4 NA NA 0 0 31 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 5 131489533 139381033 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.27 95.5 4.36 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 6 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 7 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 8 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 9 74801101 88479794 1 2 31 0 0 1 1 0 0.57 0.34 1 NA 0 NA NA NA NA NA NA 19.27 0 99.89 0 2 NA Whitelist LIRI-JP 0.68 0.59 NA 0 0.64 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 10 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 11 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 13 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 14 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 15 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 17 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 18 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 19 4550317 16351480 12 13 31 6 2 4 0 1 0.08 0 16 0 0 16 3 10 20 4 10 19.27 23.01 76.81 4 2 4 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 25 0.4 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 20 14674028 14983016 1 2 31 2 0 0 0 0 0.11 0.14 1 NA 0 NA NA NA NA NA NA 19.27 0 99.01 0 2 NA Whitelist LIRI-JP 0.54 0.34 NA 0 0.48 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK076 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK076 LIRI 0.8 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23518 RK076 male alive C22 67 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK077 1 164642108 164666030 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 23.37 42.4 57.6 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 2 211360986 239090919 1 3 33 1 2 0 0 0 0.3 0.75 2 0 0 NA NA NA 5 5 5 23.37 0.11 99.79 0 2 3 Whitelist LIRI-JP 0.62 0.92 0 0 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 3 NA NA 0 0 33 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 4 83840164 84005820 1 1 33 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 23.37 0.09 99.9 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 5 1295439 1345092 1 1 33 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 23.37 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 6 65720894 66515717 1 1 33 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 7 4 5 23.37 99.73 0.1 0 1 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 7 133169714 133765957 1 1 33 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 23.37 99.77 0 0 3 NA Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 8 141797057 142019361 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 23.37 96.44 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 9 32513657 105467016 1 2 33 2 0 0 0 0 0.11 0.37 1 NA 0 NA NA NA NA NA NA 23.37 0 99.3 0 2 NA Whitelist LIRI-JP 0.54 0.62 NA 0 0.48 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 10 94300467 94431988 1 1 33 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 23.37 0.12 99.71 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 11 62652066 62692152 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.37 0.03 99.54 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 12 41543934 41559833 1 1 33 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 23.37 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 13 85713944 94625252 1 2 33 2 0 0 0 0 0.11 0.1 3 0 0 NA NA NA NA NA NA 23.37 0.61 99.39 0 2 1 Whitelist LIRI-JP 0.54 0.27 0 0 0.48 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 14 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 15 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 16 85796345 85948769 1 2 33 1 1 0 0 0 0.57 0.22 1 NA 0 NA NA NA NA NA NA 23.37 0 99.99 0 2 NA Whitelist LIRI-JP 0.68 0.45 NA 0 0.64 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 17 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 18 NA NA 0 0 33 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 20 13890882 14049275 3 3 33 1 1 1 0 0 0.8 0.01 2 0 0 NA NA NA NA NA NA 23.37 0.25 98.69 0 2 3 Whitelist LIRI-JP 0.87 0.03 0 0 0.84 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK077 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK077 LIRI 0.93 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48677 RK077 male alive C22 58 1140 NA NA Included Liver-HCC LIRI JP 1 37.5 LIRI-JP::RK079 1 21446664 151592919 1 2 80 0 1 0 1 0 0.57 0.09 5 NA 0 5 5 5 7 6 7 28.91 40.98 59.02 0 3 2 Whitelist LIRI-JP 0.68 0.25 NA 0 0.64 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 2 211365664 240161378 1 2 80 0 1 1 0 0 0.57 0.16 4 0 0 4 4 4 5 5 5 28.91 25.45 74.44 0 1 2 Whitelist LIRI-JP 0.68 0.37 0 0 0.64 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 3 NA NA 0 0 80 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.15 NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 4 170703373 190415562 16 16 80 4 2 5 5 0 0.68 0 17 0 0 17 9 9 20 9 9 28.91 3.63 95.95 0 1 0 Whitelist LIRI-JP 0.79 0 0 0 0.76 1 High confidence LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC With other complex events 32 0.2 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 5 29680101 29716470 1 1 80 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 28.91 1.35 98.51 0 2 NA Whitelist LIRI-JP 0.62 0.19 NA NA 0.59 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 6 8622213 151997590 1 3 80 0 2 0 0 1 0.11 0.63 2 NA 0.06 NA NA NA NA NA NA 28.91 56.52 43.34 0 1 2 Whitelist LIRI-JP 0.62 0.84 NA 0.06 0.48 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 5 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 7 NA NA 0 0 80 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 8 92616813 123287245 7 7 80 1 2 2 2 0 0.93 0 9 0 0 9 4 9 12 6 6 28.91 49.86 46.72 0 2 3 Whitelist LIRI-JP 0.96 0.01 0 0 0.95 1 Low confidence LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC With other complex events 14 0.09 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 9 3532306 27548765 6 9 80 0 3 1 2 3 0.34 0 11 0 0 11 5 5 14 7 7 28.91 11.85 87.45 2 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 Low confidence LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC With other complex events 15 0.09 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 10 57747558 57758348 1 1 80 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 28.91 0.11 99.71 3 2 NA Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 11 118532514 129595758 4 4 80 0 2 1 1 0 0.57 0.42 10 0 0 10 5 7 17 6 7 28.91 12.07 87.5 0 1 2 Whitelist LIRI-JP 0.68 0.67 0 0 0.64 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 8 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 12 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 13 NA NA 0 0 80 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 14 84886618 84913179 1 1 80 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 28.91 0.02 99.06 0 2 3 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 15 NA NA 0 0 80 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 16 11516212 67658776 1 2 80 0 2 0 0 0 0.11 0.06 9 0 0 9 4 9 12 4 4 28.91 72.69 27.27 0 3 4 Whitelist LIRI-JP 0.54 0.19 0 0 0.48 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 17 47426288 47485863 1 1 80 0 1 0 0 0 0.39 0.48 2 NA NA NA NA NA 7 5 5 28.91 14.97 79.48 0 2 3 Whitelist LIRI-JP 0.62 0.72 NA NA 0.59 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 18 27176010 51348577 1 2 80 0 1 1 0 0 0.57 0.48 5 0 0 5 5 5 9 6 6 28.91 78.19 21.77 0 1 2 Whitelist LIRI-JP 0.68 0.72 0 0 0.64 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 19 33725080 33812394 1 1 80 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 7 5 5 28.91 11.07 88.54 0 2 3 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 20 42103925 42178282 3 3 80 0 1 1 1 0 0.8 0.03 3 0 0 NA NA NA 9 4 4 28.91 99.03 0 0 5 8 Whitelist LIRI-JP 0.87 0.11 0 0 0.84 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 6 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 21 NA NA 0 0 80 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.84 NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 22 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK079 X NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK079 LIRI 0.76 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578408_A_C;17_7578409_T_C,CN:1 2 LIRI-JP DO45197 RK079 male alive C22 51 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK080 1 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 6 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA 15 9 15 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 3 60637502 60872630 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 89.76 99.88 0.12 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 4 148806209 148993196 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 11 9 9 89.76 99.88 0.1 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 5 121789822 121809790 1 1 26 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA 11 5 5 89.76 99.96 0.01 0 2 4 Whitelist LIRI-JP 0.62 0.45 0 NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 6 21483916 22494798 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 10 5 5 89.76 33.69 63.32 0 6 8 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 7 8742942 10720399 1 5 26 0 0 1 0 4 0.39 0 8 0.05 0 8 3 5 21 6 8 89.76 97.01 0 0 5 6 Whitelist LIRI-JP 0.68 0 0.05 0 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 6 0.12 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 8 41302119 142389601 1 5 26 1 1 1 0 2 0.8 0.01 9 0 0 9 6 9 11 6 10 89.76 71.39 25.18 0 6 7 Whitelist LIRI-JP 0.68 0.04 0 0 0.84 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 8 0.15 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 11 125415640 125518652 1 1 26 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 8 4 4 89.76 99.57 0 0 3 4 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 13 NA NA 0 0 26 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 14 23588354 86602463 1 4 26 0 1 0 0 3 0.39 0 8 0 0 8 4 8 8 4 4 89.76 97.25 1.87 0 3 4 Whitelist LIRI-JP 8 0.68 0 0 0 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 5 0.1 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 16 NA NA 0 0 26 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.12 NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 20 NA NA 0 0 26 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK080 X 150506329 150543125 1 1 26 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 5 3 3 89.76 99.77 0 0 4 8 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK080 LIRI 0.77 3.85 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO45199 RK080 female alive C22 86 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK081 1 164703810 221497238 2 4 25 0 1 1 0 2 0.57 0 11 0 0 11 7 7 12 7 8 84.01 96.97 0 0 5 4 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 6 0.12 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 2 222318635 222349275 1 1 25 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 3 84.01 99.88 0.01 0 2 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 3 105411399 105569517 2 2 25 0 0 1 1 0 0.57 0.03 4 0 0 4 0 3 8 3 5 84.01 99.91 0.06 0 4 2 Whitelist LIRI-JP 0.68 0.1 0 0 0.64 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 4 0.08 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 5 27909782 27921799 1 1 25 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.01 99.86 0 0 5 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 7 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 8 83467345 83796708 1 1 25 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 7 3 4 84.01 68.61 27.86 0 3 5 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 9 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 10 86171135 86227826 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.01 99.82 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 12 100393413 100613983 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.01 99.92 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 14 NA NA 0 0 25 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.4 NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 21 NA NA 0 0 25 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 22 28333779 28379426 1 1 25 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 84.01 76.22 0 0 1 3 Whitelist LIRI-JP 0.62 0.02 NA NA 0.59 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK081 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK081 LIRI 0.43 3.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 4 LIRI-JP DO48679 RK081 male alive C22 72 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK082 1 47101346 204526650 1 4 35 1 3 0 0 0 0.11 0.19 7 0 0 7 3 4 9 3 4 25.33 99.99 0.01 0 3 2 Whitelist LIRI-JP 0.54 0.41 0 0 0.48 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 8 0.11 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 2 43432165 43680388 1 1 35 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 25.33 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 3 148941578 148975258 1 1 35 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 25.33 18.23 81.65 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 4 NA NA 0 0 35 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 6 144878833 145070317 1 1 35 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 25.33 0.11 99.74 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 7 88433974 114072300 1 2 35 2 0 0 0 0 0.11 0.43 4 NA 0 4 3 4 6 4 6 25.33 99.78 0 0 5 3 Whitelist LIRI-JP 0.54 0.68 NA 0 0.48 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 8 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 9 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 10 77169314 77545893 1 2 35 1 1 0 0 0 0.57 0.02 2 0 0 NA NA NA NA NA NA 25.33 0.28 99.54 0 2 3 Whitelist LIRI-JP 0.68 0.08 0 0 0.64 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 11 73460861 73528357 1 2 35 0 1 1 0 0 0.57 0.22 3 NA 0 NA NA NA 5 5 5 25.33 0.74 95.58 0 2 4 Whitelist LIRI-JP 0.68 0.45 NA 0 0.64 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 12 23681656 23693309 1 1 35 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 25.33 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 13 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 14 64500190 64569987 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.33 0.07 99.02 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 16 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 17 64344060 64767827 1 1 35 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 4 4 4 25.33 21.81 78.17 0 1 2 Whitelist LIRI-JP 0.62 0.48 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 18 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 19 31784842 32285412 2 2 35 0 0 1 1 0 0.57 0 4 0 0 4 4 4 5 5 5 25.33 0.8 99.03 0 2 3 Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 20 NA NA 0 0 35 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.14 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 22 NA NA 0 0 35 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK082 X 45219123 45231555 1 1 35 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.33 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK082 LIRI 0.66 2.17 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45201 RK082 male alive C22 49 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK083 1 59883540 240849079 1 9 106 4 1 1 1 2 0.28 0.03 19 0 0 19 8 14 21 8 14 82.16 84.06 12.97 0 6 7 Whitelist LIRI-JP 0.68 0.1 0 0 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 16 0.08 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 2 7250085 7419016 1 1 106 1 0 0 0 0 0.39 0.11 2 0.11 NA NA NA NA 4 3 3 82.16 99.91 0 0 3 4 Whitelist LIRI-JP 0.62 0.29 0.11 NA 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 3 114008845 188116179 1 2 106 1 1 0 0 0 0.57 0.25 2 0 0 NA NA NA NA NA NA 82.16 99.97 0 0 3 4 Whitelist LIRI-JP 0.68 0.49 0 0 0.64 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 4 17962435 120969085 1 4 106 3 1 0 0 0 0.11 0.7 9 0 0 9 7 9 14 7 7 82.16 59.54 38.09 0 3 2 Whitelist LIRI-JP 0.54 0.89 0 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 8 0.04 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 5 58547841 126187106 1 4 106 3 1 0 0 0 0.11 0.55 6 0 0 6 4 6 11 6 6 82.16 99.43 0.43 0 4 3 Whitelist LIRI-JP 0.54 0.77 0 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 8 0.04 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 6 38289545 162639054 1 4 106 2 0 0 0 2 0.11 0.84 6 0 0 6 6 6 7 7 7 82.16 99.86 0 0 4 5 Whitelist LIRI-JP 0.54 0.97 0 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 6 0.03 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 7 2704008 147559271 1 4 106 2 1 0 0 1 0.3 0.52 6 0 0 6 5 6 8 5 5 82.16 99.78 0 0 4 3 Whitelist LIRI-JP 0.54 0.76 0 0 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 7 0.03 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 8 47603169 141952313 1 4 106 3 1 0 0 0 0.11 1 5 0 0 5 4 5 9 5 5 82.16 78.41 18.18 0 3 4 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 8 0.04 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 9 NA NA 0 0 106 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 10 18877580 18896789 1 1 106 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA 5 4 4 82.16 94.5 5.32 0 5 6 Whitelist LIRI-JP 0.62 0.96 0 NA 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 11 46726470 116714262 1 5 106 2 2 0 1 0 0.53 0.82 6 0 0 6 6 6 7 6 6 82.16 99.44 0 0 4 5 Whitelist LIRI-JP 0.68 0.96 0 0 0.64 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 10 0.05 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 12 73775679 123858139 1 3 106 2 1 0 0 0 0.3 0.64 4 0 0 4 4 4 5 5 5 82.16 99.43 0.49 0 2 3 Whitelist LIRI-JP 0.62 0.85 0 0 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 6 0.03 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 13 NA NA 0 0 106 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA 9 3 9 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.4 0 NA NA 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 14 NA NA 0 0 106 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 15 47322700 78347419 1 3 106 3 0 0 0 0 0.03 0.77 5 0 0 5 5 5 5 5 5 82.16 99.87 0 0 4 3 Whitelist LIRI-JP 0.41 0.93 0 0 0.33 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 6 0.03 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 16 30132684 30156952 2 2 106 0 1 0 1 0 0.57 0.21 1 0 0 NA NA NA NA NA NA 82.16 98.8 0.09 0 3 NA Whitelist LIRI-JP 0.68 0.44 0 0 0.64 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 17 3479146 59946151 1 3 106 2 0 0 0 1 0.11 0.54 5 0.01 0 5 3 3 6 3 4 82.16 99.55 0.43 0 2 3 Whitelist LIRI-JP 0.62 0.77 0.01 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 5 0.02 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 18 NA NA 0 0 106 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 19 17306524 31135450 1 2 106 1 1 0 0 0 0.57 0.47 2 0 0 NA NA NA 6 3 3 82.16 99.83 0 0 4 5 Whitelist LIRI-JP 0.68 0.71 0 0 0.64 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 20 293902 364366 1 1 106 1 0 0 0 0 0.39 0.08 2 0.01 NA NA NA NA 7 5 5 82.16 98.97 0 0 3 4 Whitelist LIRI-JP 0.62 0.23 0.01 NA 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 21 NA NA 0 0 106 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 0 NA NA 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 22 17641671 34290676 1 1 106 0 1 0 0 0 0.39 0.36 3 NA NA NA NA NA NA NA NA 82.16 88.89 0 0 5 6 Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 2 0.01 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK083 X 21414606 138178457 1 2 106 2 0 0 0 0 0.11 0.38 1 0 0 NA NA NA NA NA NA 82.16 99.77 0 0 4 NA Whitelist LIRI-JP 0.54 0.63 0 0 0.48 0 No LIRI-JP RK083 LIRI 0.4 3.69 Liver-HCC NA 4 0.02 NA 3 LIRI-JP DO45203 RK083 female alive C22 71 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK084 1 31442002 31498833 1 1 25 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 3 3 18.49 41.91 58.09 0 1 2 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 2 63647058 225501139 1 2 25 0 2 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 18.49 0.21 99.71 0 2 3 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 3 178022558 183001100 1 1 25 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.49 2.51 97.39 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 4 38105041 191032397 1 1 25 1 0 0 0 0 0.39 0.23 1 0 0 NA NA NA NA NA NA 18.49 19.92 80 0 2 NA Whitelist LIRI-JP 0.62 0.47 0 0 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 5 49980407 55642470 4 4 25 1 1 1 1 0 1 0.02 10 0 0 10 3 3 12 4 4 18.49 71.29 25.91 0 2 1 Whitelist LIRI-JP 1 0.07 0 0 1 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 8 0.16 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 6 161802501 161836279 1 1 25 1 0 0 0 0 0.39 0.19 1 0 NA NA NA NA NA NA NA 18.49 0.08 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.41 0 NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 8 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 9 99091020 99179388 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.49 0.06 99.23 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 11 9875700 69589534 1 2 25 1 1 0 0 0 0.57 0.11 8 0 0 8 3 5 9 3 3 18.49 1.54 94.97 0 2 3 Whitelist LIRI-JP 0.68 0.28 0 0 0.64 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 14 NA NA 0 0 25 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 16 72893619 72992702 1 1 25 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 18.49 0.11 99.8 0 1 2 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 18 21470157 21643956 1 1 25 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 18.49 0.22 99.74 0 2 3 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 19 NA NA 0 0 25 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.24 NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK084 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK084 LIRI 0.44 2.01 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45205 RK084 female deceased C22 67 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK085 1 178136896 195084474 9 9 208 3 3 2 1 0 0.75 0.09 12 0 0 12 3 4 20 4 5 52.93 18.35 81.37 0 2 3 Whitelist LIRI-JP 0.85 0.25 0 0 0.83 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 18 0.04 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 2 153419448 214151504 2 2 208 0 1 1 0 0 0.57 0.01 8 0 0 8 3 7 12 4 4 52.93 96.32 3.58 0 3 4 Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 3 61012240 61197526 1 1 208 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 52.93 69.19 30.78 0 1 4 Whitelist LIRI-JP 0.62 0 NA NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 4 106458454 190837858 1 3 208 2 1 0 0 0 0.3 0 5 0 0 5 4 5 9 5 6 52.93 9.87 87.58 0 2 3 Whitelist LIRI-JP 0.62 0.02 0 0 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 5 11224460 11257321 2 2 208 0 0 1 1 0 0.57 0.47 4 0 0 4 3 4 18 4 5 52.93 83.5 13.8 0 4 2 Whitelist LIRI-JP 0.68 0.72 0 0 0.64 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 6 1720922 147875831 1 3 208 2 1 0 0 0 0.3 0.01 7 0 0 7 5 7 9 5 5 52.93 96.16 1.01 1 3 4 Whitelist LIRI-JP 0.62 0.04 0 0 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 7 68220087 124871888 98 106 208 29 32 16 21 8 0.09 0 147 0 0 147 5 7 155 5 7 52.93 93.26 4.16 3 7 13 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 Low confidence LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC With other complex events 204 0.49 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 8 87033701 105868006 11 13 208 4 2 3 2 2 0.8 0.27 20 0 0 20 4 5 25 4 5 52.93 56.73 43.26 4 5 21 Whitelist LIRI-JP 0.9 0.51 0 0 0.84 0 Low confidence LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC With other complex events 24 0.06 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 9 112194699 112471500 1 1 208 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 4 0 0 52.93 67.39 29.52 0 1 NA Whitelist LIRI-JP 0.62 0.02 NA NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 10 77360733 77668547 2 2 208 2 0 0 0 0 0.11 0.07 4 0 0 4 0 3 7 3 3 52.93 42.65 57.17 0 1 2 Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 11 107137504 117224494 1 2 208 2 0 0 0 0 0.11 0.14 1 0 0 NA NA NA NA NA NA 52.93 0 96.54 0 2 NA Whitelist LIRI-JP 0.54 0.33 0 0 0.48 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 12 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 13 36532420 97336247 1 4 208 3 0 0 0 1 0.03 0.34 4 0 0 4 4 4 5 5 5 52.93 100 0 0 0 1 Whitelist LIRI-JP 0.54 0.59 0 0 0.33 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 7 0.02 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 14 22078705 38151094 1 3 208 1 2 0 0 0 0.3 0.43 3 0 0 NA NA NA 4 4 4 52.93 15.1 81.19 0 2 1 Whitelist LIRI-JP 0.62 0.67 0 0 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 15 101869822 101981899 1 1 208 1 0 0 0 0 0.39 0.67 1 0 NA NA NA NA 6 3 4 52.93 18.15 76.53 0 4 NA Whitelist LIRI-JP 0.62 0.87 0 NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 16 78127323 79241309 1 2 208 1 1 0 0 0 0.57 0.39 4 0 0 4 3 4 9 4 4 52.93 1.96 98 0 2 1 Whitelist LIRI-JP 0.68 0.63 0 0 0.64 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 17 NA NA 0 0 208 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 18 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 19 NA NA 0 0 208 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 20 14284793 15984135 1 6 208 6 0 0 0 0 0 0.22 7 0 0 7 4 7 9 4 8 52.93 92.96 0 0 3 4 Whitelist LIRI-JP 0.04 0.46 0 0 0.03 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 21 29961021 30054958 1 1 208 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 52.93 0.2 77.16 0 2 4 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 22 28605346 28800619 1 1 208 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 52.93 43.22 56.78 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK085 X 104079790 104128273 1 1 208 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 52.93 100 0 0 1 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 0 No LIRI-JP RK085 LIRI 0.49 3.12 Liver-HCC NA 2 0 NA 2 LIRI-JP DO23519 RK085 male alive C22 65 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK086 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 4 39848937 39974144 1 1 12 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA 4 4 4 23.51 72.33 25.14 0 1 2 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 2 0.08 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 5 NA NA 0 0 12 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 7 8745802 8812826 1 1 12 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 4 4 23.51 19.48 80.29 0 2 3 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 2 0.08 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 10 56768319 56785082 1 1 12 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 4 4 23.51 55.04 44.77 0 1 2 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 2 0.08 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 13 86127918 86459050 2 2 12 1 1 0 0 0 0.57 0 1 0 0 NA NA NA 4 0 0 23.51 86.67 13.33 0 4 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 4 0.17 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 17 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK086 X NA NA 0 0 12 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK086 LIRI 0.89 1.91 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578215_C_A,CN:1 2 LIRI-JP DO45207 RK086 male alive C22 68 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK087 1 196668790 222838008 2 2 62 1 0 1 0 0 0.57 1 3 0 0 NA NA NA 12 4 6 27.79 23.86 76.13 0 2 3 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 2 53226274 53553037 2 2 62 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 11 5 5 27.79 1.71 98.18 0 2 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 3 116857673 121215776 4 5 62 1 1 2 0 1 0.57 0 10 0 0 10 3 4 44 6 9 27.79 36.56 63.3 6 6 2 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 9 0.07 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 4 87296896 93823324 1 2 62 1 1 0 0 0 0.57 0.44 2 NA 0 NA NA NA 23 9 13 27.79 71.98 28.01 0 1 3 Whitelist LIRI-JP 0.68 0.69 NA 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 5 89861858 110086381 3 3 62 0 0 2 1 0 0.3 0.59 5 0 0 5 4 5 13 4 6 27.79 38.43 58.77 0 2 4 Whitelist LIRI-JP 0.62 0.81 0 0 0.59 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 6 64924416 134627051 1 2 62 1 1 0 0 0 0.57 0.59 1 NA 0 NA NA NA 6 5 5 27.79 1.58 98.25 0 2 NA Whitelist LIRI-JP 0.68 0.81 NA 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 7 123995313 148506787 1 2 62 2 0 0 0 0 0.11 0.77 3 NA 0 NA NA NA NA NA NA 27.79 0.05 99.72 0 2 0 Whitelist LIRI-JP 0.54 0.93 NA 0 0.48 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 8 41300363 98028925 1 3 62 2 0 0 0 1 0.11 0.04 6 0 0 6 3 3 18 9 9 27.79 32.86 63.71 0 2 3 Whitelist LIRI-JP 0.62 0.13 0 0 0.48 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 9 113009765 114247540 2 3 62 0 1 0 1 1 0.57 0.31 1 0 0 NA NA NA 9 5 9 27.79 4.4 94.92 0 2 NA Whitelist LIRI-JP 0.62 0.56 0 0 0.64 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 10 NA NA 0 0 62 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 11 80585243 80603268 1 1 62 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 12 7 11 27.79 2.74 96.83 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 12 24148141 34697150 9 9 62 2 3 2 2 0 0.95 0 14 0 0 14 4 5 18 4 5 27.79 25.69 70.57 1 2 1 Whitelist LIRI-JP 0.97 0 0 0 0.97 0 Low confidence LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC With other complex events 18 0.15 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 13 63759691 83629074 1 1 62 1 0 0 0 0 0.39 0.73 6 NA NA 6 3 6 8 5 8 27.79 31.35 65.87 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 14 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 15 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 16 NA NA 0 0 62 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 17 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 18 38694632 38800923 1 1 62 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 5 27.79 3.22 96.77 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 19 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 20 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK087 X NA NA 0 0 62 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK087 LIRI 0.26 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23520 RK087 male alive C22 59 1410 NA NA Included Liver-HCC LIRI JP 1 46.38 LIRI-JP::RK088 1 7504322 7623295 1 1 75 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA 9 3 3 77.89 100 0 0 1 3 Whitelist LIRI-JP 0.62 0.53 NA NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 2 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 3 NA NA 0 0 75 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.96 0 NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 4 163991040 167440671 1 1 75 0 1 0 0 0 0.39 0.49 2 0.01 NA NA NA NA 4 4 4 77.89 31.51 68.26 0 2 3 Whitelist LIRI-JP 0.62 0.73 0.01 NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 5 27662227 27700673 1 1 75 1 0 0 0 0 0.39 0.24 2 0 NA NA NA NA 15 9 9 77.89 97.3 0 1 6 7 Whitelist LIRI-JP 0.62 0.47 0 NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 6 18913889 66058087 7 7 75 0 3 2 2 0 0.44 0 13 0 0 13 6 7 13 6 7 77.89 97.16 0 0 5 4 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 Low confidence LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC With other complex events 14 0.09 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 7 NA NA 0 0 75 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 8 696677 24055234 7 7 75 4 2 0 1 0 0.17 0 13 0 0 13 13 13 25 17 17 77.89 99.99 0 0 4 5 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 High confidence LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC After polyploidization 14 0.09 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 9 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 10 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 11 69311693 70067117 5 5 75 1 2 1 1 0 0.9 0 6 0 0 6 3 3 23 4 4 77.89 24.41 71.88 0 3 18 Whitelist LIRI-JP 0.93 0 0 0 0.92 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 10 0.07 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 12 NA NA 0 0 75 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 13 56263674 111686306 1 2 75 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 6 5 5 77.89 52.87 47.13 0 4 5 Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 14 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 15 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 16 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 17 9181533 76838130 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 77.89 90.48 9.49 0 4 6 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 18 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 19 23912164 23947177 1 1 75 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.89 92.72 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 20 49037441 49119433 1 1 75 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.89 99.06 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 21 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 22 21428927 42204344 1 2 75 1 1 0 0 0 0.57 0.06 8 NA 0 8 4 5 12 4 5 77.89 87.19 1.7 0 2 3 Whitelist LIRI-JP 0.68 0.19 NA 0 0.64 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK088 X 38203216 39772048 1 1 75 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 77.89 1.01 98.99 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK088 LIRI 0.78 3.47 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577575_G_A,CN:2 3 LIRI-JP DO23521 RK088 male alive C22 63 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK089 1 12558964 12621312 1 1 57 0 1 0 0 0 0.39 0.8 1 0 NA NA NA NA 6 3 4 39.61 19.68 80.32 0 2 NA Whitelist LIRI-JP 0.62 0.95 0 NA 0.59 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 2 NA NA 0 0 57 0 0 0 0 0 NA 0.63 NA 0.03 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.84 0.03 NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 3 NA NA 0 0 57 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 4 33312875 132224882 1 4 57 2 0 0 1 1 0.3 0.43 7 0 0 7 5 7 8 6 6 39.61 68.75 31.24 0 1 2 Whitelist LIRI-JP 0.68 0.68 0 0 0.59 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 7 0.06 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 5 117741578 161688956 1 2 57 0 1 0 1 0 0.57 0.58 1 NA 0 NA NA NA NA NA NA 39.61 81 18.88 0 1 NA Whitelist LIRI-JP 0.68 0.81 NA 0 0.64 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 6 63619438 68404271 1 2 57 1 0 0 1 0 0.57 1 3 0 0 NA NA NA NA NA NA 39.61 0.03 99.82 0 2 1 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 7 43844503 44353712 1 1 57 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 4 4 39.61 7.74 92.05 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 8 47391735 47407851 1 1 57 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 39.61 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 9 23213827 137506288 13 13 57 1 5 3 4 0 0.44 0 17 0 0 17 5 9 21 5 9 39.61 29.65 67.27 0 2 3 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 Low confidence LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC With other complex events 26 0.23 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 10 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 11 NA NA 0 0 57 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.92 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 12 32002678 38577709 1 5 57 1 1 0 1 2 0.8 0.05 4 0 0 4 3 4 6 3 3 39.61 23.52 72.73 0 2 1 Whitelist LIRI-JP 0.68 0.16 0 0 0.84 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 8 0.07 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 14 55188510 75731334 1 1 57 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 4 3 3 39.61 34.13 62.18 0 1 2 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 15 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 16 24746572 46966350 1 2 57 0 1 0 1 0 0.57 0.67 2 NA 0 NA NA NA 5 5 5 39.61 87.59 12.32 0 1 2 Whitelist LIRI-JP 0.68 0.87 NA 0 0.64 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 18 19300204 75878576 2 2 57 2 0 0 0 0 0.11 0.2 7 0.17 0 7 4 7 11 4 4 39.61 94.16 0.81 0 3 4 Whitelist LIRI-JP 0.54 0.42 0.17 0 0.48 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 20 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 21 NA NA 0 0 57 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK089 X NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK089 LIRI 0.63 1.65 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578499_G_T,CN:1 2 LIRI-JP DO45209 RK089 male alive C22 70 1350 NA NA Included Liver-HCC LIRI JP 1 44.41 LIRI-JP::RK090 1 153398954 153419441 1 1 187 0 0 0 1 0 0.39 0.13 1 0 NA NA NA NA 5 3 3 25.82 62.92 34.05 0 3 NA Whitelist LIRI-JP 0.62 0.33 0 NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 2 32507070 208785169 1 8 187 1 1 0 2 4 0.57 0.36 5 0 0 5 3 5 5 3 5 25.82 0.12 99.76 0 2 3 Whitelist LIRI-JP 0.68 0.61 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 3 16003670 167328681 1 8 187 1 1 3 1 2 0.57 0.77 1 0 0 NA NA NA NA NA NA 25.82 0.01 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.93 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 4 58324144 164117016 1 3 187 0 1 1 1 0 0.8 1 4 0 0 4 4 4 5 4 4 25.82 66.85 32.63 0 1 2 Whitelist LIRI-JP 0.87 1 0 0 0.84 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 5 99514226 172675298 1 2 187 1 0 0 1 0 0.57 0.22 5 0 0 5 3 5 5 3 3 25.82 0.24 99.58 0 2 1 Whitelist LIRI-JP 0.68 0.46 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 6 35628350 96891396 1 4 187 1 1 0 1 1 0.8 0.76 2 0 0 NA NA NA 7 3 3 25.82 0.16 99.58 0 2 3 Whitelist LIRI-JP 0.68 0.92 0 0 0.84 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 7 0.02 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 7 10403872 10415968 1 1 187 0 0 1 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 25.82 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 8 3822869 105622959 1 8 187 1 1 2 3 1 0.67 0.24 6 0 0 6 3 5 7 3 5 25.82 10.56 89.32 0 2 0 Whitelist LIRI-JP 0.62 0.48 0 0 0.74 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 15 0.04 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 9 23150835 83145203 1 4 187 0 0 2 2 0 0.26 0.34 1 0 0 NA NA NA NA NA NA 25.82 0 99.33 0 2 NA Whitelist LIRI-JP 0.62 0.59 0 0 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 8 0.02 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 10 89697528 89722183 1 1 187 1 0 0 0 0 0.39 0.48 1 0 NA NA NA NA NA NA NA 25.82 68.39 27.97 0 1 NA Whitelist LIRI-JP 0.62 0.73 0 NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 11 34764084 109922351 1 2 187 1 0 1 0 0 0.57 0.6 3 0 0 NA NA NA 7 3 5 25.82 0.11 99.74 0 2 1 Whitelist LIRI-JP 0.68 0.82 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 12 40056905 86458241 1 3 187 0 0 1 1 1 0.57 0.86 1 0 0 NA NA NA NA NA NA 25.82 0 99.92 0 2 NA Whitelist LIRI-JP 0.87 0.99 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 5 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 13 28122819 82256119 2 3 187 0 0 1 1 1 0.57 0.01 3 0 0 NA NA NA NA NA NA 25.82 47 38.85 0 2 1 Whitelist LIRI-JP 0.87 0.06 0 0 0.64 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 5 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 14 NA NA 0 0 187 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.97 0 NA NA 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 15 NA NA 0 0 187 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 16 24891431 72767874 1 2 187 2 0 0 0 0 0.11 0.5 4 0 0 4 4 4 5 5 5 25.82 99.9 0 0 0 1 Whitelist LIRI-JP 0.54 0.74 0 0 0.48 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 17 NA NA 0 0 187 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 18 54455300 54655266 1 1 187 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA 4 3 3 25.82 54.5 45.48 0 0 1 Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 19 NA NA 0 0 187 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 20 7144649 7157364 1 1 187 0 0 0 1 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 25.82 23.87 75.96 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 21 18324139 18334144 1 1 187 0 0 0 1 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 25.82 0.01 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.75 0 NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 22 40179335 40190040 1 1 187 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.82 0 76.22 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK090 X 45485187 142135800 1 8 187 0 0 2 6 0 0.01 0 16 0 0 16 16 16 19 19 19 25.82 67.78 29.04 0 1 2 Whitelist LIRI-JP 0.21 0 0 0 0.16 0 No LIRI-JP RK090 LIRI 0.54 1.79 Liver-HCC NA 16 0.04 NA 2 LIRI-JP DO23522 RK090 female alive C22 82 1320 NA NA Included Liver-HCC LIRI JP 1 43.42 LIRI-JP::RK091 1 54608670 107132467 3 3 427 2 1 0 0 0 0.3 0 6 0 0 6 3 6 11 8 11 38.43 22.55 77.45 0 1 2 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 6 0.01 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 2 149101886 209165492 5 55 427 1 2 1 1 50 0.9 0 29 0 0 29 17 19 33 18 20 38.43 16.43 83.48 0 1 2 Whitelist LIRI-JP 4 0.99 0 0 0 0.92 1 High confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC With other complex events 60 0.07 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 3 113505303 118369859 3 8 427 0 1 2 0 5 0.3 0.34 7 0 0 7 3 3 32 12 12 38.43 59.13 37.8 1 2 3 Whitelist LIRI-JP 0.62 0.59 0 0 0.59 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 11 0.01 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 4 13542462 186127250 108 161 427 29 26 23 30 53 0.77 0 75 0 0 75 31 37 76 32 32 38.43 39.08 60.67 0 1 2 Whitelist LIRI-JP 0.85 0 0 0 0.84 1 High confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC With other complex events 269 0.31 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 5 50697540 118326639 10 18 427 2 1 2 5 8 0.31 0.27 18 0 0 18 7 12 22 7 12 38.43 57.2 39.98 0 1 2 Whitelist LIRI-JP 6 0.62 0.52 0 0 0.59 1 High confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC With other complex events 28 0.03 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 6 41192505 161744824 54 108 427 13 16 13 12 54 0.88 0 71 0 0 71 8 31 74 8 31 38.43 40.25 59.48 0 1 2 Whitelist LIRI-JP 10_5_7 0.62 0 0 0 0.91 1 High confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC With other complex events 162 0.19 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 7 70340834 157389138 6 42 427 2 1 2 1 36 0.88 0 20 0 0 20 12 20 25 12 12 38.43 30.1 69.87 0 1 2 Whitelist LIRI-JP 6 0.62 0 0 0 0.91 1 High confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC Canonical without polyploidization 48 0.06 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 8 NA NA 0 0 427 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 9 20387727 82276971 1 6 427 2 0 1 1 2 0.57 0 8 0 0 8 5 8 8 5 5 38.43 25.02 72.54 0 2 1 Whitelist LIRI-JP 0.62 0.02 0 0 0.64 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 10 0.01 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 10 59340268 108356080 2 13 427 0 3 0 1 9 0.11 0.73 18 0 0 18 13 18 28 13 28 38.43 10.26 86.49 0 1 2 Whitelist LIRI-JP 6 0.62 0.9 0 0 0.48 1 Linked to high confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC Canonical without polyploidization 17 0.02 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 11 NA NA 0 0 427 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 12 46659315 73611218 39 43 427 12 9 9 9 4 0.88 0 61 0 0 61 5 6 67 5 9 38.43 43.3 52.89 6 8 2 Whitelist LIRI-JP 0.91 0 0 0 0.91 1 Low confidence LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC With other complex events 82 0.1 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 13 37284969 54315807 4 4 427 2 1 0 1 0 0.57 0.01 7 0 0 7 4 7 7 4 4 38.43 12.65 87.35 0 1 2 Whitelist LIRI-JP 0.68 0.04 0 0 0.64 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 8 0.01 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 14 NA NA 0 0 427 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.07 NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 15 60746366 60778458 1 1 427 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 6 6 38.43 28.84 66.38 0 1 2 Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 2 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 16 NA NA 0 0 427 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA 8 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 0 NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 17 57040052 57062375 1 1 427 0 0 0 1 0 0.39 0.01 2 NA NA NA NA NA 5 4 5 38.43 29.72 70.27 0 2 4 Whitelist LIRI-JP 0.62 0.03 NA NA 0.59 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 2 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 18 33385321 73595041 4 14 427 1 1 0 2 10 0.57 0.07 16 0 0 16 4 6 19 4 7 38.43 67.16 28.12 2 3 2 Whitelist LIRI-JP 0.9 0.21 0 0 0.64 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 18 0.02 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 19 NA NA 0 0 427 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 20 36093390 46196662 3 3 427 1 0 1 1 0 0.8 0.04 6 0 0 6 4 6 7 4 7 38.43 55.58 38.28 0 2 1 Whitelist LIRI-JP 0.87 0.14 0 0 0.84 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 6 0.01 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 21 NA NA 0 0 427 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.21 NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 22 NA NA 0 0 427 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK091 X NA NA 0 0 427 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK091 LIRI 0.74 1.97 Liver-HCC NA 0 0 NA 8 LIRI-JP DO45211 RK091 male alive C22 76 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK092 1 197549352 236211360 1 3 89 2 1 0 0 0 0.3 0.84 3 0 0 NA NA NA 11 4 4 29.39 60.9 36.07 0 4 5 Whitelist LIRI-JP 0.62 0.98 0 0 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 2 64193318 242731864 1 4 89 3 1 0 0 0 0.11 0.45 5 0 0 5 3 5 5 3 3 29.39 0.25 99.66 0 2 1 Whitelist LIRI-JP 0.54 0.69 0 0 0.48 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 3 78777685 142207559 1 2 89 1 1 0 0 0 0.57 0.09 1 NA 0 NA NA NA NA NA NA 29.39 0 99.88 0 2 NA Whitelist LIRI-JP 0.68 0.26 NA 0 0.64 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 4 26100061 63228862 23 26 89 4 8 7 4 3 0.53 0 30 0 0 30 4 4 33 4 6 29.39 99.78 0 0 4 6 Whitelist LIRI-JP 0.82 0 0 0 0.64 0 Low confidence LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC With other complex events 49 0.28 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 5 60179038 60314630 1 1 89 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 29.39 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 6 3838723 135680222 1 3 89 1 1 1 0 0 0.8 0.82 1 0.17 0 NA NA NA NA NA NA 29.39 0.21 99.65 0 2 NA Whitelist LIRI-JP 0.87 0.96 0.17 0 0.84 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 7 70118999 70221897 1 1 89 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA 4 0 3 29.39 0.48 96.94 0 2 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 8 131083984 141728589 1 2 89 2 0 0 0 0 0.11 0.63 3 0 0 NA NA NA 5 4 4 29.39 58.7 41.3 0 3 2 Whitelist LIRI-JP 0.54 0.84 0 0 0.48 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 9 97045428 97618727 1 1 89 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 7 29.39 1.09 98.77 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 10 5025218 112026483 1 5 89 3 1 0 0 1 0.11 0.01 4 0 0 4 3 4 5 3 3 29.39 1.18 98.65 0 2 1 Whitelist LIRI-JP 0.62 0.04 0 0 0.48 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 9 0.05 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 11 9759942 10280271 1 1 89 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 5 5 29.39 0.53 98.91 0 1 2 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 12 12974301 110374560 1 3 89 1 1 0 0 1 0.57 0.61 6 0 0 6 4 6 8 5 5 29.39 40.94 58.98 0 3 4 Whitelist LIRI-JP 0.62 0.83 0 0 0.64 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 5 0.03 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 13 42730072 56951040 1 3 89 1 2 0 0 0 0.3 1 4 0 0 4 4 4 7 7 7 29.39 50.93 49.07 0 1 2 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 14 66958674 67500041 1 1 89 1 0 0 0 0 0.39 0.76 1 NA NA NA NA NA 4 3 3 29.39 74.38 24.71 0 1 NA Whitelist LIRI-JP 0.62 0.92 NA NA 0.59 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 15 53655770 100261909 1 5 89 1 1 0 0 3 0.57 0.04 6 0 0 6 6 6 7 7 7 29.39 0.9 98.97 0 2 3 Whitelist LIRI-JP 0.62 0.13 0 0 0.64 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 7 0.04 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 16 34352774 78232722 1 3 89 0 1 0 1 1 0.57 0.3 2 0 0 NA NA NA 4 0 0 29.39 95.46 0 0 1 8 Whitelist LIRI-JP 0.87 0.55 0 0 0.64 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 5 0.03 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 17 15943838 29547548 1 2 89 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 29.39 30.23 65.28 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 18 NA NA 0 0 89 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 19 NA NA 0 0 89 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 20 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 21 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 22 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK092 X 19986045 144731774 2 4 89 2 0 1 1 0 0.57 0.81 1 0 0 NA NA NA NA NA NA 29.39 100 0 0 1 NA Whitelist LIRI-JP 0.68 0.95 0 0 0.64 0 No LIRI-JP RK092 LIRI 0.55 1.93 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO45213 RK092 male alive C22 58 1200 NA NA Included Liver-HCC LIRI JP 1 39.47 LIRI-JP::RK095 1 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 2 141929620 142035390 1 1 46 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 13.37 0.04 99.86 0 1 2 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 3 67493722 71562994 1 2 46 2 0 0 0 0 0.11 1 3 0 0 NA NA NA NA NA NA 13.37 0.08 99.88 0 2 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 4 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 5 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 6 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 7 69129447 69216436 1 1 46 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 13.37 0.05 99.71 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 8 95621100 96294828 1 1 46 0 1 0 0 0 0.39 0.73 4 NA NA 4 3 4 5 3 3 13.37 0.46 99.53 0 3 2 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 9 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 10 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 11 47587573 47922770 1 1 46 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 13.37 0.25 99.35 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 12 56217588 56643320 1 1 46 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 13.37 0.32 99.6 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 13 NA NA 0 0 46 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 14 50525724 99068328 24 24 46 8 3 7 6 0 0.51 0 45 0 0 45 14 24 47 14 16 13.37 43.78 55.31 0 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 High confidence LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC With other complex events 48 0.52 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 15 NA NA 0 0 46 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 16 NA NA 0 0 46 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.6 NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 17 37663400 37687630 1 1 46 0 0 0 1 0 0.39 0.35 1 NA NA NA NA NA 4 4 4 13.37 26.93 68.62 0 2 NA Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 18 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 19 36119612 36191746 1 1 46 0 0 0 1 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 13.37 63.76 36.06 0 3 NA Whitelist LIRI-JP 0.62 0.46 NA NA 0.59 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK095 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK095 LIRI 0.61 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23524 RK095 female alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK096 1 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 2 209775317 209788492 1 1 96 0 0 0 1 0 0.39 0.71 1 0 NA NA NA NA NA NA NA 7.82 0 99.91 0 2 NA Whitelist LIRI-JP 0.62 0.9 0 NA 0.59 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 3 NA NA 0 0 96 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 4 NA NA 0 0 96 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.35 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 5 NA NA 0 0 96 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.17 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 6 NA NA 0 0 96 0 0 0 0 0 NA 0.52 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 7 NA NA 0 0 96 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 8 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 9 NA NA 0 0 96 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 10 NA NA 0 0 96 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 11 NA NA 0 0 96 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 12 NA NA 0 0 96 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 13 NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 14 78386025 78399300 1 1 96 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 7.82 0.01 99.07 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 15 NA NA 0 0 96 0 0 0 0 0 NA 0.75 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.92 0 NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 16 NA NA 0 0 96 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 17 67695651 67786159 1 1 96 0 1 0 0 0 0.39 0.33 2 0 NA NA NA NA NA NA NA 7.82 0.11 99.87 0 2 4 Whitelist LIRI-JP 0.62 0.59 0 NA 0.59 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 18 31859268 56886880 1 1 96 0 0 0 1 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 7.82 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 19 NA NA 0 0 96 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 20 NA NA 0 0 96 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK096 X 121768380 121787655 1 1 96 0 0 0 1 0 0.39 0.82 1 0 NA NA NA NA NA NA NA 7.82 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.96 0 NA 0.59 0 No LIRI-JP RK096 LIRI 0.43 1.95 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45215 RK096 male alive C22 65 1170 NA NA Included Liver-HCC LIRI JP 1 38.49 LIRI-JP::RK098 1 64965582 189399400 1 3 145 2 0 0 0 1 0.11 0.04 5 0 0 5 3 5 7 3 3 80.88 96.89 0.14 0 4 2 Whitelist LIRI-JP 0.62 0.15 0 0 0.48 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 5 0.02 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 2 14098953 142171786 1 2 145 2 0 0 0 0 0.11 0 4 NA 0.02 4 4 4 5 5 5 80.88 99.91 0 0 3 4 Whitelist LIRI-JP 0.54 0 NA 0.02 0.48 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 3 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 4 46094650 65000200 16 18 145 7 2 2 5 2 0.21 0 25 0 0 25 9 15 35 9 15 80.88 33.08 66.74 2 4 2 Whitelist LIRI-JP X 0.62 0 0 0 0.59 1 High confidence LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC With other complex events 34 0.12 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 5 6820016 94475619 1 3 145 1 1 0 0 1 0.57 1 8 0 0 8 0 4 13 3 5 80.88 89.99 7.26 1 5 6 Whitelist LIRI-JP 0.87 1 0 0 0.64 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 5 0.02 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 6 NA NA 0 0 145 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 7 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 8 61570001 124934583 5 17 145 1 2 1 1 12 0.9 0 13 0 0 13 11 13 29 11 11 80.88 67.06 29.34 1 8 5 Whitelist LIRI-JP 11 0.68 0 0 0 0.92 1 High confidence LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC After polyploidization 22 0.08 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 9 119089173 119385744 1 1 145 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 6 0 6 80.88 68.36 28.53 0 2 3 Whitelist LIRI-JP 0.62 0.16 NA NA 0.59 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 10 77867680 78043461 1 1 145 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 5 3 3 80.88 96.65 0 0 1 4 Whitelist LIRI-JP 0.62 0.21 NA NA 0.59 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 11 2705633 93356459 8 22 145 3 1 2 2 14 0.8 0 21 0 0 21 5 8 31 5 8 80.88 96.51 0 0 6 5 Whitelist LIRI-JP 0.62 0 0 0 0.84 1 Low confidence LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC With other complex events 30 0.1 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 12 12860904 79270669 1 2 145 1 0 0 1 0 0.57 0.17 5 0.62 0 5 3 4 8 3 4 80.88 96.26 0 0 4 3 Whitelist LIRI-JP 0.68 0.38 0.62 0 0.64 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 13 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 14 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 15 51200850 96548477 14 15 145 3 3 4 4 1 0.96 0 8 0 0 8 3 3 12 3 3 80.88 99.44 0.44 0 4 7 Whitelist LIRI-JP 0.93 0 0 0 0.98 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 29 0.1 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 16 65524120 68155165 1 4 145 2 0 0 0 2 0.11 0.29 5 0 0 5 3 4 10 4 6 80.88 37.58 62.32 0 5 2 Whitelist LIRI-JP 0.54 0.54 0 0 0.48 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 17 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 18 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 19 NA NA 0 0 145 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 20 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 21 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 22 NA NA 0 0 145 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK098 X 63781853 76077025 15 19 145 6 4 3 2 4 0.51 0 24 0 0 24 5 6 33 5 6 80.88 21.9 74.38 0 2 3 Whitelist LIRI-JP 0.81 0 0 0 0.64 1 Low confidence LIRI-JP RK098 LIRI 0.38 3.78 Liver-HCC With other complex events 34 0.12 NA 4 LIRI-JP DO45217 RK098 female deceased C22 69 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK099 1 56953774 106704043 2 3 56 0 0 1 1 1 0.57 0.08 3 0 0 NA NA NA 8 5 8 31.36 2.17 97.83 0 2 3 Whitelist LIRI-JP 0.62 0.23 0 0 0.64 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 5 0.04 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 2 126360636 141934238 1 2 56 1 1 0 0 0 0.57 0.33 3 NA 0 NA NA NA 5 3 3 31.36 0.12 99.77 0 2 1 Whitelist LIRI-JP 0.68 0.58 NA 0 0.64 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 3 NA NA 0 0 56 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 0 NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 4 31313801 55741627 9 9 56 2 1 2 4 0 0.55 0 14 0 0 14 14 14 15 15 15 31.36 97.99 2 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 High confidence LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC Canonical without polyploidization 18 0.16 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 5 170686559 175075252 1 1 56 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 31.36 2.43 97.45 0 1 2 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 6 153242821 154964821 1 1 56 1 0 0 0 0 0.39 0.58 1 0 NA NA NA NA 4 3 4 31.36 32.36 67.49 0 3 NA Whitelist LIRI-JP 0.62 0.8 0 NA 0.59 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 7 65857393 118584091 1 2 56 2 0 0 0 0 0.11 1 5 0 0 5 5 5 8 8 8 31.36 26.47 73.28 0 2 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 8 50144650 144536434 7 9 56 2 3 0 2 2 0.44 0 12 0 0 12 5 12 13 6 6 31.36 48.72 51.27 0 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.64 1 Low confidence LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC With other complex events 16 0.14 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 9 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 10 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 11 126901447 127361706 1 1 56 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.36 0.34 99.23 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 12 81335168 132592473 1 2 56 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA 4 4 4 31.36 1.54 98.38 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 13 NA NA 0 0 56 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 14 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 15 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 16 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 17 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 18 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 19 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 20 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 21 NA NA 0 0 56 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK099 X NA NA 0 0 56 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK099 LIRI 0.56 1.7 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577506_A_C,CN:1 2 LIRI-JP DO45219 RK099 male alive C22 78 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK100 1 83463223 236148431 2 7 104 1 0 1 0 5 0.57 0.2 12 0 0 12 4 9 15 4 9 80.44 91.49 8.51 0 2 4 Whitelist LIRI-JP 0.96 0.42 0 0 0.64 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 9 0.04 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 2 141644616 142094682 4 4 104 4 0 0 0 0 0.01 0.6 2 0 0 NA NA NA 7 5 7 80.44 99.76 0.17 0 2 3 Whitelist LIRI-JP 0.21 0.81 0 0 0.16 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 8 0.04 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 3 40928305 48177701 2 2 104 0 0 1 1 0 0.57 0.08 4 0 0 4 3 4 18 11 11 80.44 83.67 16.19 1 2 4 Whitelist LIRI-JP 0.68 0.23 0 0 0.64 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 4 138117 57689386 31 31 104 5 8 9 9 0 0.71 0 39 0 0 39 7 9 42 7 9 80.44 27.06 70.57 0 3 4 Whitelist LIRI-JP 0.82 0 0 0 0.79 1 High confidence LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC With other complex events 62 0.3 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 5 NA NA 0 0 104 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 8 4 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 0 NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 6 162559660 162765201 1 1 104 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 7 3 3 80.44 99.62 0.24 0 2 3 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 7 NA NA 0 0 104 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.15 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 8 1019068 48859039 1 3 104 3 0 0 0 0 0.03 1 11 0.07 0.03 11 4 10 20 6 10 80.44 89.73 6.32 0 4 5 Whitelist LIRI-JP 0.41 1 0.07 0.03 0.33 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 6 0.03 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 9 NA NA 0 0 104 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 10 78254970 94789550 1 2 104 2 0 0 0 0 0.11 0.24 2 NA 0 NA NA NA NA NA NA 80.44 69.84 29.98 0 2 3 Whitelist LIRI-JP 0.54 0.48 NA 0 0.48 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 11 38177268 116718817 1 3 104 0 0 0 2 1 0.11 0.49 7 0 0 7 0 4 11 0 4 80.44 96.52 0 0 4 5 Whitelist LIRI-JP 0.62 0.73 0 0 0.48 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 5 0.02 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 12 NA NA 0 0 104 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 13 55959026 56196332 1 1 104 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 80.44 96.36 0 0 5 NA Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 14 NA NA 0 0 104 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 15 NA NA 0 0 104 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 16 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 17 NA NA 0 0 104 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 18 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 19 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 20 15019535 15167902 2 2 104 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 8 3 3 80.44 92.58 0.09 0 2 3 Whitelist LIRI-JP 0.54 0.22 0 0 0.48 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 21 NA NA 0 0 104 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 22 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK100 X 48002589 124488576 12 12 104 2 3 2 5 0 0.57 0 18 0 0 18 5 7 20 5 7 80.44 86.53 13.24 1 2 3 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 Low confidence LIRI-JP RK100 LIRI 0.56 3.33 Liver-HCC With other complex events 24 0.12 nonsynonymous_SNV,17_7577520_G_A,CN:1 3 LIRI-JP DO45221 RK100 female deceased C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK101 1 77338008 234743896 1 11 218 2 1 0 0 8 0.3 1 15 0 0 15 3 7 16 3 5 86.98 96.71 0 0 4 5 Whitelist LIRI-JP 9 0.68 1 0 0 0.59 1 Linked to high confidence LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC With other complex events 14 0.03 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 2 67650388 218706584 1 10 218 2 1 1 0 6 0.57 0.9 12 0 0 12 3 6 12 3 3 86.98 97.05 0 0 4 6 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 14 0.03 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 3 87752517 187989973 1 2 218 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 86.98 96.81 0 0 3 4 Whitelist LIRI-JP 0.54 0 NA 0 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 4 59366877 155527654 1 2 218 0 2 0 0 0 0.11 0 5 0.01 0 5 3 5 7 3 4 86.98 64.7 35.12 0 5 2 Whitelist LIRI-JP 0.54 0.01 0.01 0 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 5 91497073 91824652 1 1 218 1 0 0 0 0 0.39 0 1 0.01 NA NA NA NA NA NA NA 86.98 99.87 0 0 3 NA Whitelist LIRI-JP 0.62 0.01 0.01 NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 6 5596735 26155402 1 2 218 2 0 0 0 0 0.11 0.47 2 0 0.07 NA NA NA 8 3 4 86.98 96.57 0.48 0 2 4 Whitelist LIRI-JP 0.54 0.72 0 0.07 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 7 37766286 37778135 1 1 218 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 4 0 4 86.98 97.55 0 0 4 NA Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 8 101981812 145863694 1 4 218 1 1 1 0 1 0.8 0.64 5 0 0 5 3 4 8 5 5 86.98 66.79 29.34 1 9 6 Whitelist LIRI-JP 1 0.85 0 0 0.84 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 7 0.02 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 9 4642656 38474066 40 56 218 7 10 12 11 16 0.71 0 53 0 0 53 9 11 56 9 11 86.98 96.92 0 0 3 5 Whitelist LIRI-JP 11 0.9 0 0 0 0.78 1 High confidence LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC With other complex events 96 0.22 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 10 32706418 33115563 1 1 218 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 5 5 5 86.98 99.82 0 0 1 3 Whitelist LIRI-JP 0.62 0.09 0 NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 11 69040190 120528008 59 73 218 18 15 14 12 14 0.74 0 92 0 0 92 5 7 93 5 7 86.98 99.77 0.05 1 7 3 Whitelist LIRI-JP 9 0.82 0 0 0 0.81 1 Low confidence LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC With other complex events 132 0.3 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 12 980160 1067671 1 1 218 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 86.98 99.92 0 0 3 NA Whitelist LIRI-JP 0.62 0.02 NA NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 13 NA NA 0 0 218 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 0 NA NA 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 0 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 14 85320685 85657844 1 2 218 2 0 0 0 0 0.11 0.17 3 0 0 NA NA NA 8 3 6 86.98 100 0 0 3 4 Whitelist LIRI-JP 0.54 0.39 0 0 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 15 44751569 45009045 2 2 218 1 0 0 1 0 0.57 0.1 2 NA 0 NA NA NA 4 4 4 86.98 79.66 15.41 0 2 3 Whitelist LIRI-JP 0.68 0.27 NA 0 0.64 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 16 87736808 87919911 1 1 218 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 4 86.98 95.44 0 0 3 5 Whitelist LIRI-JP 0.62 0.12 NA NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 17 20912198 76248452 4 7 218 3 1 0 0 3 0.11 0.05 7 0 0 7 3 5 14 3 5 86.98 91.12 4.45 0 5 3 Whitelist LIRI-JP 11 0.77 0.17 0 0 0.48 1 Linked to low confidence LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC With other complex events 11 0.03 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 18 37438011 41372085 2 2 218 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 86.98 99.9 0 0 4 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 19 21054966 21174975 2 2 218 2 0 0 0 0 0.11 1 3 0 0 NA NA NA 6 3 3 86.98 99.83 0 0 0 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 20 15400466 15425394 1 1 218 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 4 4 86.98 93.67 0 0 3 4 Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 2 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 21 NA NA 0 0 218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 0 0 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 22 28782952 34121094 1 2 218 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 5 6 86.98 88.81 0.08 0 2 5 Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 4 0.01 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK101 X 30867398 127990193 1 7 218 2 3 0 1 1 0.34 0.88 14 0 0 14 4 5 14 4 5 86.98 98.12 1.88 0 4 1 Whitelist LIRI-JP 0.68 1 0 0 0.59 1 No LIRI-JP RK101 LIRI 0.81 3.69 Liver-HCC NA 13 0.03 stopgain,17_7573982_A_C,CN:1 4 LIRI-JP DO23525 RK101 male alive C22 71 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 1 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 2 203694628 203895077 1 1 55 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 24.21 0.08 99.82 0 2 3 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 3 71302439 116346452 1 2 55 1 1 0 0 0 0.57 0.44 4 NA 0 4 3 4 5 3 3 24.21 0.08 99.8 0 2 1 Whitelist LIRI-JP 0.68 0.69 NA 0 0.64 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 4 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 5 6395209 58851963 1 2 55 1 1 0 0 0 0.57 0.58 2 NA 0.01 NA NA NA NA NA NA 24.21 0.31 99.57 0 2 3 Whitelist LIRI-JP 0.68 0.81 NA 0.01 0.64 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 6 30689887 30917971 1 1 55 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 24.21 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 7 NA NA 0 0 55 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 8 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 9 21899257 21987514 1 1 55 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.21 99.3 0 0 0 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 11 66210041 91962236 20 20 55 3 10 5 2 0 0.06 0 13 0 0 13 3 4 18 5 5 24.21 3.33 96.24 1 2 8 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 40 0.36 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 12 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 13 54606628 54732960 1 1 55 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.21 100 0 0 1 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 14 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 16 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 18 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 19 12880086 23447116 5 5 55 1 2 1 1 0 0.9 0 10 0 0 10 10 10 10 10 10 24.21 33.57 66.26 0 1 2 Whitelist LIRI-JP 0.93 0 0 0 0.92 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 10 0.09 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 20 3863045 3980313 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.21 0 99.03 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 22 NA NA 0 0 55 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK102 X NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK102 LIRI 0.46 1.81 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:1 2 LIRI-JP DO23526 RK102 male alive C22 66 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK103 1 32923207 197024098 1 3 19 3 0 0 0 0 0.03 0.18 4 0 0 4 4 4 6 6 6 13.83 17.21 82.47 0 1 2 Whitelist LIRI-JP 0.41 0.4 0 0 0.33 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 6 0.16 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 2 57877767 57904433 1 1 19 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.83 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 3 55957559 56440447 1 1 19 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.83 0 99.97 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 4 74285253 184767977 1 2 19 0 2 0 0 0 0.11 0.13 4 0 0 4 3 4 8 3 3 13.83 13.26 86.72 0 2 1 Whitelist LIRI-JP 0.54 0.32 0 0 0.48 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 6 121909706 122108172 1 1 19 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.83 0 99.74 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 7 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 8 15319585 128368931 1 2 19 1 0 1 0 0 0.57 0.25 3 NA 0 NA NA NA 7 4 4 13.83 96.47 0 0 1 3 Whitelist LIRI-JP 0.68 0.49 NA 0 0.64 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 9 135706992 135792249 1 1 19 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 7 5 7 13.83 54.51 43.08 0 1 3 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 10 NA NA 0 0 19 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 11 84767762 85237501 1 1 19 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 13.83 0 99.84 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 12 125831470 131148522 1 2 19 1 0 1 0 0 0.57 0.22 2 NA 0 NA NA NA NA NA NA 13.83 2.18 97.73 0 1 2 Whitelist LIRI-JP 0.68 0.46 NA 0 0.64 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 16 66926234 67133957 1 1 19 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 13.83 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 22 NA NA 0 0 19 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.43 NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK103 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK103 LIRI 0.37 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45223 RK103 male alive C22 67 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK104 1 24041598 235080297 1 9 88 0 3 0 0 6 0.03 0.03 15 0 0 15 4 7 18 4 7 24.77 57.97 38.73 1 4 2 Whitelist LIRI-JP 0.62 0.1 0 0 0.33 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 12 0.07 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 2 63802828 237183818 1 9 88 1 3 0 1 4 0.28 0.56 8 0 0 8 3 7 9 3 5 24.77 0.63 99.27 0 2 4 Whitelist LIRI-JP 0.97 0.79 0 0 0.59 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 14 0.08 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 3 13202525 178476004 1 10 88 1 2 0 1 6 0.57 0.06 11 0 0 11 5 9 11 5 9 24.77 0.96 95.87 0 2 3 Whitelist LIRI-JP 0.68 0.18 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 14 0.08 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 4 74302422 155540511 1 7 88 1 2 1 0 3 0.57 0.67 10 0 0 10 4 4 13 4 4 24.77 28.13 71.72 0 2 3 Whitelist LIRI-JP 0.77 0.87 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 11 0.06 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 5 157592123 160389842 4 4 88 0 1 1 2 0 0.57 0.12 4 0 0 4 0 3 19 6 10 24.77 30.08 67.24 0 2 3 Whitelist LIRI-JP 0.68 0.31 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 8 0.05 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 6 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 7 NA NA 0 0 88 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.84 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 8 NA NA 0 0 88 0 0 0 0 0 NA 0.81 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 9 114684603 116460264 1 3 88 0 1 0 1 1 0.57 0.78 5 0 0 5 3 5 7 3 3 24.77 0.83 99.13 0 2 1 Whitelist LIRI-JP 0.62 0.93 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 5 0.03 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 10 93400430 93594620 2 2 88 0 0 1 1 0 0.57 0.13 2 0 0 NA NA NA 7 3 5 24.77 0.36 99.54 0 1 3 Whitelist LIRI-JP 0.68 0.32 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 11 NA NA 0 0 88 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 12 891263 125108721 1 7 88 1 1 0 1 4 0.8 0.2 3 0.03 0 NA NA NA NA NA NA 24.77 0.22 99.69 0 2 1 Whitelist LIRI-JP 0.96 0.42 0.03 0 0.84 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 10 0.06 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 13 96655051 96791865 1 1 88 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA 4 3 3 24.77 50.45 46.77 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 14 44501308 80871714 1 2 88 1 0 1 0 0 0.57 0.36 2 0 0 NA NA NA NA NA NA 24.77 25.33 74.67 0 1 2 Whitelist LIRI-JP 0.68 0.61 0 0 0.64 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 15 45079236 63169137 1 3 88 0 3 0 0 0 0.03 0.1 4 0 0 4 3 4 6 3 5 24.77 16.12 79.1 0 2 3 Whitelist LIRI-JP 0.41 0.26 0 0 0.33 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 16 4074168 51280174 1 2 88 0 2 0 0 0 0.11 0.03 2 0 0.04 NA NA NA 4 3 3 24.77 0.9 99.01 0 2 3 Whitelist LIRI-JP 0.54 0.11 0 0.04 0.48 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 17 66296273 67067116 1 1 88 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 5 5 24.77 17.91 76.47 0 1 2 Whitelist LIRI-JP 0.62 0.02 0 NA 0.59 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 18 NA NA 0 0 88 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 19 NA NA 0 0 88 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 20 32233048 32384464 1 1 88 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.77 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 21 NA NA 0 0 88 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 0 NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 22 NA NA 0 0 88 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK104 X 105098519 105400959 3 4 88 0 1 0 2 1 0.3 0.8 2 0 0 NA NA NA NA NA NA 24.77 100 0 0 1 3 Whitelist LIRI-JP 0.68 0.95 0 0 0.59 0 No LIRI-JP RK104 LIRI 0.64 2.15 Liver-HCC NA 7 0.04 NA 2 LIRI-JP DO23527 RK104 male alive C22 72 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK105 1 151462921 168548995 1 2 32 1 0 0 1 0 0.57 0.74 1 0 0 NA NA NA 4 0 0 84.99 48.6 48.1 0 8 NA Whitelist LIRI-JP 0.68 0.91 0 0 0.64 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 4 0.06 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 2 228252404 228473977 1 1 32 0 0 0 1 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 84.99 99.89 0 0 5 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 3 191385510 192049752 1 1 32 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 84.99 99.85 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 4 183118808 189883827 3 3 32 1 0 1 1 0 0.8 0.02 5 0 0 5 5 5 6 5 5 84.99 46.1 53.9 0 2 1 Whitelist LIRI-JP 0.87 0.07 0 0 0.84 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 6 0.09 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 6 63352367 68434776 1 3 32 1 0 1 0 1 0.57 0.01 5 0 0 5 3 5 13 3 5 84.99 97.13 0 0 3 5 Whitelist LIRI-JP 0.87 0.05 0 0 0.64 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 5 0.08 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 7 19204216 19215994 1 1 32 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.99 99.78 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 8 2220778 116182433 1 9 32 3 1 0 0 5 0.11 0 8 0 0 8 8 8 9 8 9 84.99 66.1 33.9 1 2 4 Whitelist LIRI-JP 0.62 0 0 0 0.48 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 13 0.2 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 9 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 11 49839406 49873887 1 1 32 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.99 99.57 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 12 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 13 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 14 106049590 106169571 1 1 32 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.99 99.09 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 16 50677781 60847233 1 3 32 2 0 0 0 1 0.11 0.05 4 NA 0 4 4 4 9 4 7 84.99 95.46 0 0 1 3 Whitelist LIRI-JP 0.62 0.17 NA 0 0.48 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 5 0.08 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 17 39243453 39263734 1 1 32 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 84.99 99.84 0 0 4 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 18 NA NA 0 0 32 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 19 NA NA 0 0 32 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK105 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK105 LIRI 0.81 3.96 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23528 RK105 female alive C22 45 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK106 1 15817182 77943487 2 3 59 0 1 0 1 1 0.57 0.02 5 0 0 5 3 3 12 4 5 49.48 55.51 41.29 0 2 3 Whitelist LIRI-JP 0.62 0.09 0 0 0.64 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 2 NA NA 0 0 59 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 3 59517970 59743789 1 1 59 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 49.48 99.86 0 0 3 4 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 4 116171939 116910674 2 2 59 0 0 1 1 0 0.57 0.44 2 NA 0 NA NA NA 4 3 3 49.48 34.5 65.48 0 2 3 Whitelist LIRI-JP 0.68 0.69 NA 0 0.64 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 5 58483180 151796121 1 4 59 3 0 0 0 1 0.03 0.1 9 0 0 9 5 8 13 5 9 49.48 99.68 0.19 0 3 2 Whitelist LIRI-JP 0.54 0.26 0 0 0.33 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 7 0.06 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 6 966582 129186137 15 15 59 4 5 3 3 0 0.87 0 26 0 0 26 8 8 26 8 8 49.48 40.13 56.55 5 3 5 Whitelist LIRI-JP 0.93 0 0 0 0.9 1 High confidence LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC With other complex events 30 0.25 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 7 NA NA 0 0 59 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 8 65631229 141790875 1 2 59 2 0 0 0 0 0.11 0.54 3 0 0 NA NA NA 5 3 4 49.48 75.06 24.93 0 4 3 Whitelist LIRI-JP 0.54 0.77 0 0 0.48 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 9 21853513 21981345 1 1 59 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 5 49.48 0.62 96.83 0 1 2 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 11 17871982 18060495 1 1 59 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 5 5 49.48 0.72 95.58 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 12 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 13 NA NA 0 0 59 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.07 0 NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 14 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 16 7204331 7603168 1 1 59 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 0 49.48 86.93 8.31 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 17 40341094 40680594 2 3 59 1 1 0 0 1 0.57 0.08 6 0 0 6 3 5 8 4 5 49.48 77.65 17.91 0 5 1 Whitelist LIRI-JP 0.62 0.22 0 0 0.64 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 22 33965171 34219800 1 1 59 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 49.48 0.5 75.72 0 1 2 Whitelist LIRI-JP 0.62 0.36 NA NA 0.59 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK106 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK106 LIRI 0.3 2.42 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45225 RK106 male alive C22 69 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK107 1 26503377 220160009 9 35 616 1 0 4 4 26 0.13 0 66 0 0 66 9 21 87 11 21 73.1 84 15.72 0 4 2 Whitelist LIRI-JP 10_12_13_14_4_6_9 0.62 0 0 0 0.55 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 44 0.04 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 False positive; manually removed LIRI-JP::RK107 2 2119500 211577974 1 40 616 7 13 0 0 20 0 0.72 50 0 0 50 9 9 53 9 9 73.1 53.37 46.54 0 4 6 Whitelist LIRI-JP 11_12_14_17_3_9 0.04 0.9 0 0 0 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 60 0.05 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 3 39802700 133489711 3 15 616 2 0 2 2 9 0.57 0.05 40 0 0 40 9 22 57 9 28 73.1 99.35 0.34 0 3 5 Whitelist LIRI-JP 12_2 0.68 0.16 0 0 0.64 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 21 0.02 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 False positive; manually removed LIRI-JP::RK107 4 40323309 109722573 3 13 616 0 1 1 1 10 0.8 1 13 0 0 13 9 10 32 11 18 73.1 33.97 65.99 0 2 4 Whitelist LIRI-JP 3 0.8 1 0 0 0.84 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 16 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 False positive; manually removed LIRI-JP::RK107 5 114928401 130625244 5 9 616 3 0 1 1 4 0.28 0.28 11 0 0 11 5 7 45 7 9 73.1 99.2 0.67 0 4 3 Whitelist LIRI-JP 20 0.68 0.52 0 0 0.59 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 14 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 6 8643449 170152202 1 25 616 2 12 0 0 11 0 0.2 32 0 0 32 9 17 35 9 18 73.1 99.55 0.3 0 4 6 Whitelist LIRI-JP 1_17_9 0.2 0.43 0 0 0 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 39 0.03 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 7 76628274 105997653 2 9 616 0 0 2 2 5 0.26 0.53 10 0 0 10 4 6 33 7 12 73.1 97.33 0.01 0 3 1 Whitelist LIRI-JP 4 0.62 0.76 0 0 0.59 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 13 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 8 69685950 76720204 3 3 616 2 1 0 0 0 0.3 0.31 1 0 0 NA NA NA 25 7 9 73.1 88.12 11.87 0 4 NA Whitelist LIRI-JP 0.62 0.56 0 0 0.59 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 6 0 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 9 98064387 131689724 3 14 616 0 0 1 2 11 0.3 0 27 0 0 27 6 10 52 7 16 73.1 17.38 81.93 0 4 6 Whitelist LIRI-JP 1_19_2 0.81 0 0 0 0.59 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 17 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 10 75643021 104011740 2 10 616 0 4 0 0 6 0.01 1 21 0 0 21 11 13 27 11 13 73.1 99.82 0 0 4 6 Whitelist LIRI-JP 1 0.18 1 0 0 0.16 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 14 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 11 65126119 117045449 5 11 616 2 1 1 1 6 0.9 0 41 0 0 41 11 12 71 11 17 73.1 94.64 1.74 0 4 6 Whitelist LIRI-JP 12_20 0.62 0 0 0 0.92 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 16 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 False positive; manually removed LIRI-JP::RK107 12 565831 121912250 2 22 616 1 1 0 0 20 0.57 0 35 0 0 35 9 20 39 9 20 73.1 99.92 0 0 3 5 Whitelist LIRI-JP 1_11_17_2_3 0.62 0.01 0 0 0.64 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 24 0.02 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 13 21110069 110361132 1 9 616 2 6 0 0 1 0.01 0.05 10 0 0 10 6 6 11 7 7 73.1 32.34 67.66 0 4 2 Whitelist LIRI-JP 1 0.41 0.15 0 0 0.16 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 17 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 14 31438137 103571317 1 26 616 4 7 0 0 15 0.01 0.06 26 0 0 26 5 10 27 5 10 73.1 99.06 0.02 0 3 4 Whitelist LIRI-JP 1_2_22_3 0.75 0.19 0 0 0.16 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 37 0.03 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 15 45286866 70735581 2 5 616 1 1 1 1 1 1 0.22 17 0 0 17 5 7 27 5 8 73.1 99.3 0.54 0 3 2 Whitelist LIRI-JP 0.93 0.45 0 0 1 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 9 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 16 68020655 71620720 2 2 616 0 0 1 1 0 0.57 0.53 6 0 0 6 4 6 17 5 8 73.1 77.54 22.14 0 2 3 Whitelist LIRI-JP 0.68 0.76 0 0 0.64 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 4 0 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 17 7015742 8463747 2 6 616 0 1 0 1 4 0.57 0 8 0 0 8 5 8 46 10 18 73.1 85.9 13.47 0 4 2 Whitelist LIRI-JP 2 0.93 0 0 0 0.64 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 8 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 18 56083707 56111203 2 2 616 0 2 0 0 0 0.11 0.06 3 0 0 NA NA NA 4 0 3 73.1 99.96 0 0 3 4 Whitelist LIRI-JP 0.54 0.19 0 0 0.48 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 4 0 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 19 3053413 48647994 1 24 616 1 8 1 0 14 0 0 25 0 0 25 5 16 28 5 16 73.1 99.83 0 0 3 5 Whitelist LIRI-JP 17_9 0.62 0 0 0 0.05 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 34 0.03 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 20 14679819 52532841 1 15 616 1 8 0 1 5 0 0.04 17 0 0 17 5 9 21 5 6 73.1 89.83 1.86 0 4 6 Whitelist LIRI-JP 11_5 0.12 0.13 0 0 0.05 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 25 0.02 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 21 33297952 34879922 1 2 616 1 1 0 0 0 0.57 0.14 4 0 0 4 3 4 6 3 3 73.1 77.76 0 0 3 1 Whitelist LIRI-JP 0.68 0.33 0 0 0.64 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 4 0 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 22 18897837 41064431 1 22 616 2 7 0 0 13 0 0 15 0 0 15 5 5 15 5 5 73.1 40.05 58.09 0 2 3 Whitelist LIRI-JP 12_14_2 0.28 0 0 0 0.08 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 31 0.03 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK107 X 9274075 127703848 1 4 616 1 3 0 0 0 0.11 0 9 0.03 0 9 7 9 9 7 7 73.1 0.26 99.51 0 2 3 Whitelist LIRI-JP 0.54 0 0.03 0 0.48 0 No LIRI-JP RK107 LIRI 0.68 3.19 Liver-HCC NA 8 0.01 NA 4 LIRI-JP DO45227 RK107 female alive C22 57 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK108 1 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 2 57797390 58224487 1 1 31 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA 5 3 3 24.01 0.33 99.56 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 2 0.03 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 3 124327041 124540197 1 1 31 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 24.01 0.11 99.75 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 2 0.03 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 4 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 5 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 6 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 7 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 8 41965299 99510338 1 2 31 1 1 0 0 0 0.57 0.21 6 0 0 6 3 6 13 3 6 24.01 58.1 38.47 0 1 2 Whitelist LIRI-JP 0.68 0.43 0 0 0.64 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 4 0.06 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 9 73688835 73699832 1 1 31 0 0 1 0 0 0.39 0.34 1 NA NA NA NA NA 7 3 5 24.01 63.91 33.53 0 2 NA Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 2 0.03 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 10 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 11 65140631 92206154 1 2 31 2 0 0 0 0 0.11 0.65 1 NA 0 NA NA NA NA NA NA 24.01 0 99.57 0 2 NA Whitelist LIRI-JP 0.54 0.86 NA 0 0.48 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 4 0.06 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 12 6807268 7119197 1 1 31 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.01 99.68 0.23 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 2 0.03 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 13 77751915 77834469 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.01 0.07 85.78 0 0 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 2 0.03 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 14 NA NA 0 0 31 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 15 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 17 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 18 2089581 2856084 2 2 31 1 0 0 1 0 0.57 0 5 0 0 5 3 5 10 3 6 24.01 6.52 93.44 2 4 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 4 0.06 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 19 15451239 18236145 3 3 31 0 1 1 1 0 0.8 0 4 0 0 4 0 3 9 0 3 24.01 58.61 41.21 0 1 3 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 6 0.1 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 20 NA NA 0 0 31 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK108 X NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK108 LIRI 0.33 1.85 Liver-HCC NA 0 0 NA 1 LIRI-JP DO45229 RK108 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK109 1 210244770 233295302 1 2 32 0 0 1 0 1 0.39 0.31 3 0.01 NA NA NA NA 6 5 5 19.35 41.87 58.13 0 3 4 Whitelist LIRI-JP 0.68 0.56 0.01 NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 3 0.05 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 2 20521480 20587534 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 19.35 0.05 99.85 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 3 NA NA 0 0 32 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 0 NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 4 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 5 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 6 43038930 43447622 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.35 0.24 99.62 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 7 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 8 11420758 67813106 1 2 32 0 2 0 0 0 0.11 0.22 3 NA 0 NA NA NA 4 3 4 19.35 95.9 0.67 0 1 2 Whitelist LIRI-JP 0.54 0.45 NA 0 0.48 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 4 0.06 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 9 89613684 120191904 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 4 19.35 21.84 75.57 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 10 88286603 94924991 2 4 32 1 1 0 0 2 0.57 0.06 1 0 0 NA NA NA NA NA NA 19.35 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.18 0 0 0.64 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 6 0.09 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 11 58473549 117140803 1 4 32 2 2 0 0 0 0.26 0.06 3 0 0 NA NA NA NA NA NA 19.35 0.76 98.81 0 2 3 Whitelist LIRI-JP 0.62 0.19 0 0 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 8 0.12 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 12 NA NA 0 0 32 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 13 46342080 110609082 1 1 32 1 0 0 0 0 0.39 0.1 2 NA 0 NA NA NA 5 3 3 19.35 56.65 29.2 0 1 2 Whitelist LIRI-JP 0.62 0.26 NA 0 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 14 31343062 32222973 1 1 32 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 5 5 5 19.35 1.14 82.95 0 2 3 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 15 77860481 78948506 1 1 32 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 19.35 1.06 83.36 0 2 3 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 16 46837455 46955566 1 1 32 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 19.35 57.28 38.19 0 1 4 Whitelist LIRI-JP 0.62 0.44 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 17 31296972 31308210 1 1 32 1 0 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 19.35 62.05 33.45 0 3 NA Whitelist LIRI-JP 0.62 0.44 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 19 10483208 11353115 1 1 32 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA 4 3 4 19.35 1.47 91.24 0 2 3 Whitelist LIRI-JP 0.62 0.71 NA NA 0.59 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK109 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK109 LIRI 0.36 1.98 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45231 RK109 male alive C22 84 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK110 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 5 NA NA 0 0 5 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 6 157366915 157493756 1 1 5 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 4 4 13.83 0.18 99.68 0 1 2 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 2 0.2 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 8 2159724 42727060 1 1 5 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA 4 3 3 13.83 96.58 0 0 1 3 Whitelist LIRI-JP 0.62 0.46 NA NA 0.59 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 2 0.2 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 10 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.44 NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 13 NA NA 0 0 5 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.37 NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK110 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK110 LIRI 0.37 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23529 RK110 male alive C22 72 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK111 1 6300063 213681406 1 9 176 1 6 0 0 2 0 0.33 15 0 0 15 13 15 16 13 13 27.31 12.75 87.25 0 2 3 Whitelist LIRI-JP 0.02 0.58 0 0 0.09 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 16 0.05 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 2 38847878 241946977 1 24 176 1 7 0 1 15 0 0 19 0 0 19 18 19 20 18 18 27.31 27.65 72.25 0 2 3 Whitelist LIRI-JP 12_15 0.62 0.01 0 0 0.11 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 33 0.09 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 3 108509239 108679326 3 3 176 0 1 1 1 0 0.8 0.1 2 0 0 NA NA NA 17 9 9 27.31 6.93 92.93 0 2 3 Whitelist LIRI-JP 0.87 0.27 0 0 0.84 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 4 97695682 180026885 1 3 176 1 2 0 0 0 0.3 0.03 5 0 0 5 3 5 6 4 4 27.31 54.87 45.11 0 1 0 Whitelist LIRI-JP 0.62 0.12 0 0 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 5 40383215 141493650 1 6 176 0 5 1 0 0 0.01 0.27 7 0 0 7 7 7 8 8 8 27.31 1.39 98.46 0 2 3 Whitelist LIRI-JP 0.25 0.52 0 0 0.19 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 12 0.03 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 6 70784621 78103264 2 2 176 0 0 1 1 0 0.57 1 4 0 0 4 4 4 15 7 7 27.31 10.83 88.99 0 2 3 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 7 1568503 116388352 1 13 176 0 7 2 2 2 0.02 0.09 16 0 0 16 9 16 19 10 10 27.31 13.43 86.34 0 3 2 Whitelist LIRI-JP 0.5 0.25 0 0 0.33 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 24 0.07 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 8 79395638 79459878 3 3 176 0 1 1 1 0 0.8 0.23 2 0 0 NA NA NA 6 5 5 27.31 30.07 69.93 0 2 3 Whitelist LIRI-JP 0.87 0.46 0 0 0.84 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 9 113768773 141027965 1 8 176 0 4 0 1 3 0.04 0.12 9 0 0 9 3 6 13 6 6 27.31 40.19 59.64 0 3 4 Whitelist LIRI-JP 2 0.54 0.3 0 0 0.36 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 13 0.04 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 10 73592301 80444902 10 10 176 4 2 2 2 0 0.75 0.01 6 0 0 6 6 6 12 10 10 27.31 57.47 42.36 0 1 2 Whitelist LIRI-JP 0.86 0.05 0 0 0.83 0 Low confidence LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC Canonical without polyploidization 20 0.06 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 11 63718956 64217834 3 3 176 1 2 0 0 0 0.3 0.59 5 0 0 5 3 5 11 4 5 27.31 74.55 21.38 0 2 4 Whitelist LIRI-JP 0.62 0.81 0 0 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 12 1100157 108110606 1 10 176 1 7 1 1 0 0.01 0 13 0 0 13 9 13 15 9 9 27.31 6.87 93.11 0 2 3 Whitelist LIRI-JP 0.3 0.01 0 0 0.23 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 20 0.06 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 13 48578366 48777881 1 1 176 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 4 4 27.31 29.1 70.9 0 2 3 Whitelist LIRI-JP 0.62 0.12 NA NA 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 14 24007832 25233667 3 3 176 0 3 0 0 0 0.03 0.83 6 0 0 6 3 6 12 4 4 27.31 1.5 97.59 0 3 4 Whitelist LIRI-JP 0.41 0.97 0 0 0.33 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 15 25211195 98014819 1 12 176 1 5 1 1 4 0.11 0 14 0 0 14 13 14 15 13 13 27.31 1.87 98.02 1 2 3 Whitelist LIRI-JP 2 0.62 0.01 0 0 0.48 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 20 0.06 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 16 14571317 71421134 1 3 176 0 3 0 0 0 0.03 0.64 7 0 0 7 4 7 8 5 5 27.31 22.91 76.98 0 2 1 Whitelist LIRI-JP 0.41 0.85 0 0 0.33 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 17 58550036 73457175 3 3 176 0 1 1 1 0 0.8 0.82 5 0 0 5 5 5 10 5 7 27.31 63.32 31.4 0 4 5 Whitelist LIRI-JP 0.87 0.96 0 0 0.84 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 6 0.02 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 18 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 0 0 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 19 14071846 46096435 1 6 176 0 6 0 0 0 0 0.09 14 0 0 14 14 14 18 17 17 27.31 12.32 87.51 0 2 3 Whitelist LIRI-JP 0.04 0.25 0 0 0.03 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 12 0.03 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 20 2545498 2702234 1 1 176 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 27.31 0.25 98.78 0 2 3 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 21 46676602 46747391 1 1 176 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 27.31 69.82 7.53 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 22 37990612 38105598 1 1 176 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 27.31 0.22 99.78 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK111 X 48495314 146662774 2 12 176 2 0 2 0 8 0.26 0.05 3 0 0 NA NA NA NA NA NA 27.31 99.99 0.01 0 1 2 Whitelist LIRI-JP 12_2 0.83 0.17 0 0 0.59 0 No LIRI-JP RK111 LIRI 0.9 1.83 Liver-HCC NA 16 0.05 frameshift_deletion,17_7578200_-_C,CN:1 2 LIRI-JP DO48681 RK111 male alive C22 57 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 1 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 2 228844715 228873944 1 1 43 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 26.42 5.26 94.64 0 2 NA Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 3 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 20 4 10 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 4 164584549 164625491 1 1 43 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA 5 3 4 26.42 8.94 91.04 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 5 28821840 28943731 1 1 43 0 0 0 1 0 0.39 0.75 2 NA 0 NA NA NA 6 4 5 26.42 12.13 87.73 0 2 4 Whitelist LIRI-JP 0.62 0.92 NA 0 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 6 18735623 29548100 4 6 43 0 2 1 1 2 0.57 0 4 0 0 4 4 4 7 6 7 26.42 0.69 96.48 0 1 2 Whitelist LIRI-JP 0.68 0.02 0 0 0.64 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 10 0.12 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 7 104750286 104916325 1 1 43 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 6 3 3 26.42 0.64 99.16 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 8 120904986 120929581 1 1 43 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 4 5 26.42 44.76 55.24 0 2 3 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 9 16297055 16359368 2 2 43 1 0 1 0 0 0.57 0.01 1 0 0 NA NA NA 9 3 5 26.42 0.87 98.46 0 2 NA Whitelist LIRI-JP 0.68 0.03 0 0 0.64 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 10 NA NA 0 0 43 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 4 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 13 33387878 37709032 1 2 43 0 0 0 1 1 0.39 0.66 3 NA NA NA NA NA 6 6 6 26.42 52.97 47.03 0 2 1 Whitelist LIRI-JP 0.68 0.87 NA NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 3 0.03 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 14 34226946 42917793 1 2 43 0 0 2 0 0 0.11 0.15 1 0 0 NA NA NA NA NA NA 26.42 15 81.29 0 2 NA Whitelist LIRI-JP 0.54 0.36 0 0 0.48 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 16 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 17 NA NA 0 0 43 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 18 21323595 21506084 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.42 0.23 99.75 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 19 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 20 7912024 12423476 6 10 43 1 1 1 3 4 0.57 0 8 0 0 8 7 8 9 7 7 26.42 15.43 83.59 0 2 1 Whitelist LIRI-JP 0.96 0 0 0 0.64 1 High confidence LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC Canonical without polyploidization 16 0.19 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 21 NA NA 0 0 43 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.66 NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK112 X 137337600 137435691 1 2 43 0 0 1 0 1 0.39 0.02 1 0 NA NA NA NA NA NA NA 26.42 99.77 0 0 1 NA Whitelist LIRI-JP 0.68 0.08 0 NA 0.59 1 No LIRI-JP RK112 LIRI 0.3 1.93 Liver-HCC NA 3 0.03 NA 2 LIRI-JP DO45233 RK112 male alive C22 83 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK113 1 201983621 211765818 1 1 25 0 0 0 1 0 0.39 0.13 1 0 NA NA NA NA NA NA NA 5.15 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.32 0 NA 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 2 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 3 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 4 15834934 16790277 1 2 25 0 0 0 1 1 0.39 0.08 1 0.17 NA NA NA NA NA NA NA 5.15 0 99.77 0 2 NA Whitelist LIRI-JP 0.68 0.23 0.17 NA 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 3 0.06 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 5 43092181 50571386 3 3 25 0 1 1 1 0 0.8 0.07 1 0 0 NA NA NA NA NA NA 5.15 0 99.86 0 2 NA Whitelist LIRI-JP 0.87 0.2 0 0 0.84 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 6 64431135 72467078 1 3 25 0 0 1 2 0 0.3 0.19 3 0 0 NA NA NA NA NA NA 5.15 0.21 99.54 0 2 3 Whitelist LIRI-JP 0.62 0.41 0 0 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 7 114114675 114143389 1 1 25 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 4 0 0 5.15 1.59 98.17 0 2 NA Whitelist LIRI-JP 0.62 0.05 0 NA 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 8 NA NA 0 0 25 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 9 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 11 NA NA 0 0 25 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.28 NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 14 48400853 106754686 1 1 25 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 5.15 0 84.45 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 21 35772010 35947307 1 1 25 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 5.15 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK113 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK113 LIRI 0.2 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23530 RK113 male deceased C22 53 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK115 1 226392310 226421347 1 1 35 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 26.9 48.28 48.66 0 3 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 2 NA NA 0 0 35 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 3 42815760 42915537 1 1 35 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.9 0.05 99.83 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 5 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 6 NA NA 0 0 35 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 7 85261732 85291758 1 1 35 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.9 0.02 99.74 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 8 62147916 78781187 1 3 35 0 2 0 0 1 0.11 0.1 2 0 0 NA NA NA NA NA NA 26.9 71.44 28.55 0 2 3 Whitelist LIRI-JP 0.62 0.27 0 0 0.48 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 5 0.07 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 9 20178066 20225648 1 1 35 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA 4 0 3 26.9 15.73 83.56 0 1 NA Whitelist LIRI-JP 0.62 0.36 NA NA 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 10 5024731 30235338 1 2 35 1 1 0 0 0 0.57 0.68 3 NA 0 NA NA NA NA NA NA 26.9 0.04 99.78 0 2 3 Whitelist LIRI-JP 0.68 0.88 NA 0 0.64 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 11 83688509 84486166 1 2 35 2 0 0 0 0 0.11 0.68 4 NA 0 4 4 4 5 5 5 26.9 0.22 99.36 0 2 3 Whitelist LIRI-JP 0.54 0.88 NA 0 0.48 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 12 1384268 85063427 1 6 35 0 2 0 1 3 0.3 0.01 6 0 0 6 6 6 6 6 6 26.9 52.87 43.39 0 2 3 Whitelist LIRI-JP 0.68 0.03 0 0 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 9 0.13 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 13 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 14 25262626 50851968 1 4 35 0 1 0 0 3 0.39 0 2 0 0 NA NA NA 5 5 5 26.9 66.95 29.34 0 1 2 Whitelist LIRI-JP 12 0.68 0.02 0 0 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 5 0.07 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 15 64167677 64227241 1 1 35 0 1 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 26.9 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 18 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 19 4611541 22183278 3 3 35 1 2 0 0 0 0.3 0 2 0 0 NA NA NA NA NA NA 26.9 17.58 82.06 0 1 2 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 6 0.09 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 20 14237134 14592424 1 2 35 1 1 0 0 0 0.57 0.17 1 NA 0 NA NA NA NA NA NA 26.9 0 99.01 0 2 NA Whitelist LIRI-JP 0.68 0.39 NA 0 0.64 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK115 X NA NA 0 0 35 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK115 LIRI 0.38 2.05 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45235 RK115 female alive C22 68 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK117 1 70333898 73159127 2 11 130 1 0 0 1 9 0.57 0 3 0 0 NA NA NA NA NA NA 9.25 0.08 99.92 0 2 1 Whitelist LIRI-JP 13 0.74 0.01 0 0 0.64 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 13 0.05 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 2 NA NA 0 0 130 0 0 0 0 0 NA 0.88 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 3 NA NA 0 0 130 0 0 0 0 0 NA 0.23 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 4 NA NA 0 0 130 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.53 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 5 NA NA 0 0 130 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 6 94023398 94125200 1 1 130 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 6 6 6 9.25 0.41 99.45 0 1 2 Whitelist LIRI-JP 0.62 0.7 0 NA 0.59 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 7 NA NA 0 0 130 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.98 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 8 NA NA 0 0 130 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 9 19248865 32455645 1 11 130 1 0 1 1 8 0.8 0 3 0 0 NA NA NA 4 4 4 9.25 8.72 90.62 0 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.84 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 14 0.05 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 10 NA NA 0 0 130 0 0 0 0 0 NA 0.67 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 11 NA NA 0 0 130 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 12 NA NA 0 0 130 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 13 29029306 51769999 5 9 130 4 0 0 1 4 0.04 0 4 0 0 4 4 4 7 6 6 9.25 24.84 72.38 0 1 2 Whitelist LIRI-JP 16 0.54 0 0 0 0.36 0 Linked to low confidence LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC Canonical without polyploidization 14 0.05 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 14 NA NA 0 0 130 0 0 0 0 0 NA 0.61 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 15 NA NA 0 0 130 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 16 12581311 86577989 6 8 130 3 1 1 1 2 0.57 0 5 0 0 5 5 5 7 7 7 9.25 23.95 75.91 0 2 1 Whitelist LIRI-JP 13 0.62 0.01 0 0 0.64 0 Low confidence LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC Canonical without polyploidization 14 0.05 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 17 NA NA 0 0 130 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 18 NA NA 0 0 130 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 19 4946278 8294439 1 2 130 0 0 1 1 0 0.57 0.75 1 NA 0 NA NA NA NA NA NA 9.25 0 99.83 0 2 NA Whitelist LIRI-JP 0.68 0.91 NA 0 0.64 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 20 NA NA 0 0 130 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 21 NA NA 0 0 130 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 22 NA NA 0 0 130 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK117 X NA NA 0 0 130 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 0 NA NA 0 No LIRI-JP RK117 LIRI 0.73 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23532 RK117 female alive C22 71 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK118 1 28808906 205067209 1 3 44 1 1 1 0 0 0.8 0.02 9 0 0 9 4 4 10 4 4 35.41 22.09 77.91 0 2 4 Whitelist LIRI-JP 0.87 0.08 0 0 0.84 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 6 0.07 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 2 63029981 63209116 1 1 44 1 0 0 0 0 0.39 0.42 1 0 NA NA NA NA NA NA NA 35.41 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.66 0 NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 3 41340973 86465132 1 2 44 2 0 0 0 0 0.11 0.55 2 0 0 NA NA NA 4 3 4 35.41 96.8 0.03 0 2 3 Whitelist LIRI-JP 0.54 0.78 0 0 0.48 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 4 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 5 NA NA 0 0 44 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.18 0 NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 6 54325067 123553430 4 4 44 0 2 1 1 0 0.57 0 6 0 0 6 4 5 13 4 4 35.41 99.86 0 0 1 3 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 8 0.09 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 7 90295954 90658319 1 1 44 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 15 3 4 35.41 82.54 14.46 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 8 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 9 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 10 402173 671458 1 1 44 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 35.41 0.2 99.58 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 11 14582881 14800016 1 1 44 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 5 35.41 72.78 26.82 0 1 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 12 46769983 46789735 1 1 44 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA 5 5 5 35.41 24.76 75.15 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 13 43463288 43529073 1 1 44 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 4 4 4 35.41 14.21 83.01 0 1 2 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 16 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 17 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 18 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 19 10215602 10501730 1 1 44 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA 7 4 4 35.41 0.73 91.95 0 2 4 Whitelist LIRI-JP 0.62 0.18 NA NA 0.59 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 22 NA NA 0 0 44 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK118 X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK118 LIRI 0.64 2.34 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23533 RK118 male alive C22 61 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK119 1 100672633 104076416 1 1 110 0 0 0 1 0 0.39 0.11 2 0 0 NA NA NA 4 3 3 15.55 43.26 56.74 0 1 2 Whitelist LIRI-JP 0.62 0.29 0 0 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 2 152075233 182020726 21 22 110 6 4 8 3 1 0.42 0 37 0 0 37 6 7 43 6 6 15.55 11.71 88.19 16 3 9 Whitelist LIRI-JP 0.62 0 0 0 0.63 1 Low confidence LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC With other complex events 43 0.2 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 3 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 4 NA NA 0 0 110 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.12 NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 5 59053606 179748409 36 42 110 8 12 8 8 6 0.72 0 20 0 0 20 12 16 20 12 12 15.55 8.64 91.21 1 2 3 Whitelist LIRI-JP 2 0.72 0 0 0 0.8 1 High confidence LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC Canonical without polyploidization 78 0.35 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 6 162267419 162398965 1 1 110 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 15.55 0 99.75 0 2 NA Whitelist LIRI-JP 0.62 0.06 NA NA 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 7 89712981 122064524 3 6 110 0 1 1 1 3 0.8 0.67 2 0 0 NA NA NA NA NA NA 15.55 73.86 23.3 0 2 3 Whitelist LIRI-JP 5 0.68 0.87 0 0 0.84 1 Linked to high confidence LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC With other complex events 9 0.04 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 8 42315238 42457406 1 1 110 0 1 0 0 0 0.39 0.19 1 NA 0 NA NA NA NA NA NA 15.55 29.31 67.14 0 1 NA Whitelist LIRI-JP 0.62 0.41 NA 0 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 9 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 10 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 11 NA NA 0 0 110 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 12 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 13 63031720 63081455 1 1 110 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 15.55 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 14 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 15 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 16 78234333 78762870 1 2 110 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 6 6 15.55 1.97 97.91 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 17 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 18 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 19 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 20 14326793 14999714 1 1 110 1 0 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 15.55 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 21 34726486 35032734 1 1 110 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.55 76.72 0.64 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 22 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK119 X 49396584 95509333 1 3 110 1 1 0 0 1 0.57 0.66 4 0 0 4 3 4 5 3 3 15.55 0.06 99.94 0 2 1 Whitelist LIRI-JP 0.62 0.87 0 0 0.64 1 No LIRI-JP RK119 LIRI 0.7 2.09 Liver-HCC NA 5 0.02 nonsynonymous_SNV,17_7577111_C_G,CN:1 2 LIRI-JP DO48682 RK119 female deceased C22 72 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK120 1 NA NA 0 0 52 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 2 156976548 157749295 3 3 52 0 1 1 1 0 0.8 0.45 3 0 0 NA NA NA NA NA NA 8.87 0.01 99.88 0 2 1 Whitelist LIRI-JP 0.87 0.69 0 0 0.84 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 3 49321073 136432403 1 4 52 3 1 0 0 0 0.11 0.18 3 0 0 NA NA NA NA NA NA 8.87 0.08 99.76 0 2 1 Whitelist LIRI-JP 0.54 0.39 0 0 0.48 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 8 0.08 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 4 54044651 54181003 1 1 52 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 8.87 0.04 99.78 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 5 109638345 109648749 1 1 52 0 0 0 1 0 0.39 0.38 1 0 NA NA NA NA NA NA NA 8.87 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 6 NA NA 0 0 52 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 7 36945698 37224253 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.87 0.18 99.77 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 8 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 9 28658249 39086583 6 6 52 4 1 0 1 0 0.11 0 14 0 0 14 4 8 25 4 8 8.87 21.17 78.61 0 3 2 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 12 0.12 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 10 44056852 89688045 1 4 52 2 0 1 0 1 0.3 0.3 6 0 0 6 4 6 9 6 6 8.87 95.35 1.22 0 2 1 Whitelist LIRI-JP 0.54 0.55 0 0 0.59 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 7 0.07 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 11 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 12 7615759 18078649 1 2 52 0 0 2 0 0 0.11 0.74 1 NA 0 NA NA NA NA NA NA 8.87 0 99.92 0 2 NA Whitelist LIRI-JP 0.54 0.91 NA 0 0.48 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 13 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 14 NA NA 0 0 52 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 17 73705222 73800040 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 8.87 27.44 68.11 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 18 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 19 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 20 15009054 15765843 3 3 52 0 1 1 1 0 0.8 0.1 2 0 0 NA NA NA NA NA NA 8.87 1.15 98.69 0 1 2 Whitelist LIRI-JP 0.87 0.27 0 0 0.84 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK120 X NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK120 LIRI 0.9 1.9 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23534 RK120 male alive C22 60 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK121 1 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 2 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 3 NA NA 0 0 35 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 4 101126283 130852966 6 6 35 2 2 1 1 0 0.88 0.01 6 0 0 6 6 6 8 7 7 94.59 94.5 3.13 0 2 4 Whitelist LIRI-JP 0.93 0.04 0 0 0.91 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 12 0.17 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 5 58778159 58897889 1 1 35 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 7 3 3 94.59 99.88 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 6 76146201 130779137 3 3 35 0 0 2 1 0 0.3 0.06 9 0 0 9 4 4 10 5 5 94.59 99.85 0 0 3 4 Whitelist LIRI-JP 0.62 0.18 0 0 0.59 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 6 0.09 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 7 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 8 995948 20530138 2 4 35 2 0 1 1 0 0.57 0.1 6 0.43 0 6 6 6 8 7 7 94.59 95.13 1.45 0 2 3 Whitelist LIRI-JP 0.68 0.27 0.43 0 0.64 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 8 0.11 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 9 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 10 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 12 109816604 110157988 1 1 35 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA 5 3 3 94.59 99.92 0 0 4 5 Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 13 93914146 93974223 1 1 35 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 94.59 100 0 0 3 4 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 14 35843100 35879612 1 2 35 0 1 0 1 0 0.57 0.02 2 0 0 NA NA NA 5 0 3 94.59 99.09 0 0 4 6 Whitelist LIRI-JP 0.68 0.09 0 0 0.64 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 17 NA NA 0 0 35 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 19 17538190 18783780 1 3 35 1 1 1 0 0 0.8 0 4 0 0 4 0 3 11 3 4 94.59 99.83 0 0 9 10 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 6 0.09 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 20 14700926 15112263 1 1 35 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 94.59 99.01 0 0 3 4 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK121 X NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK121 LIRI 0.84 3.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:3 4 LIRI-JP DO48684 RK121 female deceased C22 71 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK122 1 NA NA 0 0 256 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.96 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 2 5684062 223882151 1 3 256 0 1 2 0 0 0.3 0.31 3 0 0 NA NA NA NA NA NA 31.81 23.69 76.2 0 2 3 Whitelist LIRI-JP 0.62 0.56 0 0 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 3 100989378 104690117 7 9 256 1 3 1 2 2 0.67 0.01 6 0 0 6 6 6 9 9 9 31.81 1.88 98.09 0 1 2 Whitelist LIRI-JP 0.68 0.05 0 0 0.74 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 16 0.03 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 4 97654227 190787738 1 3 256 1 0 2 0 0 0.3 0.71 3 0 0 NA NA NA 7 5 5 31.81 0.06 99.74 0 2 1 Whitelist LIRI-JP 0.62 0.9 0 0 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 5 1296781 85032688 6 10 256 3 1 1 1 4 0.57 0.02 6 0 0 6 4 6 6 4 4 31.81 25.21 72.02 0 2 3 Whitelist LIRI-JP 0.96 0.08 0 0 0.64 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 16 0.03 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 6 NA NA 0 0 256 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.16 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 7 NA NA 0 0 256 0 0 0 0 0 NA 0.58 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 8 NA NA 0 0 256 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 9 NA NA 0 0 256 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 NA NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 10 63141382 63151850 1 1 256 0 0 0 1 0 0.39 0.76 1 0 NA NA NA NA NA NA NA 31.81 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.93 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 11 102235842 119995023 6 6 256 1 1 2 2 0 0.88 0.55 3 0 0 NA NA NA NA NA NA 31.81 0.01 99.56 0 2 1 Whitelist LIRI-JP 0.93 0.78 0 0 0.91 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 12 0.02 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 12 104607346 124849611 1 2 256 2 0 0 0 0 0.11 0.88 4 0 0 4 4 4 5 5 5 31.81 0.83 99.09 0 0 2 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 13 26341997 52251485 1 1 256 1 0 0 0 0 0.39 0.04 2 0 0 NA NA NA NA NA NA 31.81 22.5 77.5 0 1 2 Whitelist LIRI-JP 0.62 0.14 0 0 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 14 NA NA 0 0 256 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 15 61639624 61651494 1 1 256 0 0 0 1 0 0.39 1 1 0 NA NA NA NA NA NA NA 31.81 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 16 13771304 13786671 1 1 256 0 0 1 0 0 0.39 0.56 1 0 NA NA NA NA NA NA NA 31.81 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.79 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 17 34863330 74377835 1 6 256 1 0 2 1 2 0.57 0 5 0 0 5 3 5 7 3 3 31.81 95.4 0.1 0 3 2 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 10 0.02 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 18 62629135 63190211 1 1 256 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 31.81 40.25 58.45 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 19 NA NA 0 0 256 0 0 0 0 0 NA 0.65 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 0 NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 20 43862580 58101904 1 2 256 0 0 1 1 0 0.57 0.67 1 0 0 NA NA NA NA NA NA 31.81 0 99.03 0 2 NA Whitelist LIRI-JP 0.68 0.87 0 0 0.64 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 21 NA NA 0 0 256 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 22 17298556 17316466 1 1 256 0 0 0 1 0 0.39 0.55 1 0 NA NA NA NA NA NA NA 31.81 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.78 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK122 X 82467873 82480865 1 1 256 0 0 1 0 0 0.39 0.11 1 0 NA NA NA NA 5 5 5 31.81 83.25 16.52 0 1 NA Whitelist LIRI-JP 0.62 0.29 0 NA 0.59 0 No LIRI-JP RK122 LIRI 0.87 1.91 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48686 RK122 male alive C22 75 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK123 1 NA NA 0 0 20 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 2 205511068 205759383 1 1 20 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 92.91 99.89 0 0 5 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 2 0.05 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 3 59853562 134184592 1 2 20 1 1 0 0 0 0.57 0.16 4 0 0 4 3 4 5 3 3 92.91 99.71 0.17 0 4 2 Whitelist LIRI-JP 0.68 0.37 0 0 0.64 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 4 0.1 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 4 103782095 124994885 1 2 20 0 1 0 1 0 0.57 0.15 2 NA 0 NA NA NA 6 3 3 92.91 76.96 20.49 0 3 4 Whitelist LIRI-JP 0.68 0.35 NA 0 0.64 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 4 0.1 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 5 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 6 63509523 65675436 1 2 20 1 1 0 0 0 0.57 0.34 4 NA 0 4 0 3 9 0 0 92.91 96.91 0 0 6 12 Whitelist LIRI-JP 0.68 0.59 NA 0 0.64 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 4 0.1 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 8 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 9 21921593 22010952 1 1 20 0 0 1 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 92.91 99.84 0 0 1 3 Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 2 0.05 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 10 NA NA 0 0 20 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.47 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 11 NA NA 0 0 20 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.48 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 16 NA NA 0 0 20 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.67 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 19 NA NA 0 0 20 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.18 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 20 NA NA 0 0 20 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.01 NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK123 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK123 LIRI 0.69 3.91 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48687 RK123 female alive C22 73 120 NA NA Included Liver-HCC LIRI JP 1 3.95 LIRI-JP::RK124 1 66874698 169251700 1 3 75 0 0 1 2 0 0.3 1 4 0 0 4 4 4 4 4 4 25.43 45.42 54.26 0 1 2 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 6 0.04 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 2 139122546 139303183 1 1 75 1 0 0 0 0 0.39 0.68 2 0 NA NA NA NA NA NA NA 25.43 0.07 99.83 0 1 2 Whitelist LIRI-JP 0.62 0.88 0 NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 3 58691822 194628571 1 5 75 0 0 0 2 3 0.11 0.02 1 0 0 NA NA NA NA NA NA 25.43 0 99.86 0 2 NA Whitelist LIRI-JP 8 0.62 0.08 0 0 0.48 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 7 0.05 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 4 53501610 58789069 3 3 75 2 1 0 0 0 0.3 0.02 8 0 0 8 6 7 11 6 9 25.43 96.62 0.37 0 1 3 Whitelist LIRI-JP 0.62 0.07 0 0 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 6 0.04 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 5 27873444 27885363 1 1 75 0 0 0 1 0 0.39 0.47 1 0 NA NA NA NA NA NA NA 25.43 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.72 0 NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 6 NA NA 0 0 75 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.7 0 NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 7 94806765 145538081 1 2 75 0 0 1 1 0 0.57 0.6 2 0 0 NA NA NA 4 4 4 25.43 83.82 13.83 0 2 3 Whitelist LIRI-JP 0.68 0.82 0 0 0.64 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 8 39131312 126874233 1 9 75 0 1 3 1 4 0.28 0 6 0 0 6 6 6 6 6 6 25.43 40.92 58.97 0 2 3 Whitelist LIRI-JP 0.62 0.02 0 0 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 14 0.09 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 9 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 10 NA NA 0 0 75 0 0 0 0 0 NA 0.78 NA 0.27 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 0.27 NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 11 NA NA 0 0 75 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 0 NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 12 NA NA 0 0 75 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 13 47679651 47722800 1 1 75 0 0 1 0 0 0.39 0.04 1 0 NA NA NA NA NA NA NA 25.43 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.15 0 NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 14 27754849 27765913 1 1 75 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 25.43 21.96 78.04 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 15 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 16 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 17 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 18 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 19 19964571 19985023 1 1 75 0 0 0 1 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 25.43 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 20 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 21 NA NA 0 0 75 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 22 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK124 X 94340752 94351135 1 1 75 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 25.43 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK124 LIRI 0.62 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 LIRI-JP DO23535 RK124 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK125 1 NA NA 0 0 18 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 8 6 8 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 2 11068227 208704491 1 3 18 0 3 0 0 0 0.03 0.06 5 0.09 0 5 5 5 5 5 5 86.24 99.89 0 0 4 6 Whitelist LIRI-JP 0.41 0.18 0.09 0 0.33 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 6 0.17 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 3 158364518 158553179 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 86.24 99.99 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 4 19396363 114632915 1 3 18 2 0 0 0 1 0.11 0.12 5 NA 0 5 3 5 6 4 4 86.24 45.8 54.01 0 2 1 Whitelist LIRI-JP 0.62 0.3 NA 0 0.48 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 5 0.14 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 5 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 6 149791829 150188282 1 1 18 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 86.24 99.78 0.09 0 4 NA Whitelist LIRI-JP 0.62 0.54 NA NA 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 8 42277039 42365608 1 1 18 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA 4 3 4 86.24 99.94 0.06 0 2 4 Whitelist LIRI-JP 0.62 0.47 NA NA 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 7 8 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 17 16283165 57411792 1 1 18 0 0 0 1 0 0.39 0.01 5 NA 0 5 3 3 7 3 3 86.24 100 0 0 6 2 Whitelist LIRI-JP 0.62 0.05 NA 0 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 0 0 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 22 32000197 32496304 1 1 18 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 5 5 86.24 27.89 61 0 1 2 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK125 X 149788148 149943377 1 1 18 1 0 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 86.24 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK125 LIRI 0.72 3.47 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO23536 RK125 male alive C22 56 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK126 1 19176337 217270587 1 6 163 1 4 0 0 1 0.04 0.47 10 0 0 10 4 8 12 4 4 73.14 82.79 17.21 0 5 6 Whitelist LIRI-JP 0.54 0.71 0 0 0.36 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 11 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 2 20417315 241834840 1 13 163 5 7 0 0 1 0.01 0.32 15 0 0 15 3 7 17 3 5 73.14 99.86 0.04 0 4 6 Whitelist LIRI-JP 0.41 0.58 0 0 0.16 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 25 0.08 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 3 24259038 34134282 2 2 163 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 8 4 4 73.14 99.97 0 0 4 NA Whitelist LIRI-JP 0.68 0.19 0 0 0.64 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 4 21794348 118647662 1 5 163 0 3 0 0 2 0.03 0.64 5 0 0 5 3 5 9 4 4 73.14 42.44 57.37 0 3 2 Whitelist LIRI-JP 0.45 0.85 0 0 0.33 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 8 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 5 148209598 179301610 1 3 163 0 2 0 1 0 0.3 0.63 4 0 0 4 3 4 7 3 5 73.14 97.21 0 0 5 3 Whitelist LIRI-JP 0.62 0.84 0 0 0.59 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 6 37309326 142453580 1 5 163 0 5 0 0 0 0 0.25 7 0 0 7 5 7 7 5 7 73.14 99.74 0 7 4 6 Whitelist LIRI-JP 0.1 0.49 0 0 0.07 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 10 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 7 1532305 127504422 1 10 163 1 4 0 1 4 0.11 0.01 14 0 0 14 6 6 17 6 7 73.14 99.96 0 0 4 5 Whitelist LIRI-JP 0.68 0.04 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 16 0.05 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 8 94180012 140153088 1 2 163 1 1 0 0 0 0.57 0.86 6 0 0 6 4 6 7 5 5 73.14 99.88 0 0 4 5 Whitelist LIRI-JP 0.68 0.99 0 0 0.64 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 9 6519108 7007384 3 3 163 0 2 1 0 0 0.3 0.01 4 0 0 4 3 4 15 3 8 73.14 99.97 0 0 8 5 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 10 22001687 114776576 1 3 163 0 2 0 0 1 0.11 0.71 4 0 0 4 4 4 4 4 4 73.14 33.51 66.35 0 2 4 Whitelist LIRI-JP 0.62 0.9 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 5 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 11 539820 65185831 1 5 163 1 3 0 0 1 0.11 0.85 5 0 0 5 0 3 7 3 3 73.14 14.61 85.22 0 1 2 Whitelist LIRI-JP 0.62 0.99 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 9 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 12 942410 102002338 1 5 163 0 3 0 0 2 0.03 1 6 0 0 6 3 6 6 3 6 73.14 99.92 0 0 4 6 Whitelist LIRI-JP 0.62 1 0 0 0.33 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 8 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 13 21989215 95036704 1 5 163 2 3 0 0 0 0.14 0.83 7 0 0 7 3 7 8 3 3 73.14 14.41 82.82 0 2 4 Whitelist LIRI-JP 0.62 0.97 0 0 0.59 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 10 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 14 39608275 100533558 1 2 163 0 2 0 0 0 0.11 0.82 4 0 0 4 3 4 6 3 5 73.14 100 0 0 4 6 Whitelist LIRI-JP 0.54 0.96 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 15 NA NA 0 0 163 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.85 NA NA NA 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 16 3067351 19186358 1 3 163 0 2 0 0 1 0.11 0.46 5 0 0 5 3 5 7 3 3 73.14 38.18 57.28 0 3 1 Whitelist LIRI-JP 7 0.62 0.7 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 5 0.02 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 17 16099566 80341631 1 7 163 1 3 0 0 3 0.11 0.01 5 0 0 5 0 4 6 0 3 73.14 79.18 19.77 0 4 3 Whitelist LIRI-JP 0.41 0.06 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 11 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 18 1812080 26917302 1 2 163 0 2 0 0 0 0.11 0.81 3 NA 0.04 NA NA NA 5 3 3 73.14 35.04 64.92 0 4 6 Whitelist LIRI-JP 0.54 0.95 NA 0.04 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 19 10081334 55926914 1 5 163 1 4 0 0 0 0.04 0.04 2 0 0 NA NA NA 4 3 4 73.14 99.83 0 0 4 6 Whitelist LIRI-JP 0.45 0.15 0 0 0.36 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 10 0.03 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 20 14981551 15339623 2 2 163 2 0 0 0 0 0.11 0.03 4 0 0 4 0 3 10 4 5 73.14 99.75 0.12 0 1 2 Whitelist LIRI-JP 0.54 0.1 0 0 0.48 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 4 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 21 NA NA 0 0 163 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 22 35714601 35732320 1 1 163 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 73.14 23.78 65.11 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK126 X NA NA 0 0 163 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.02 NA NA NA 0 No LIRI-JP RK126 LIRI 0.78 3.44 Liver-HCC NA 0 0 NA 4 LIRI-JP DO45237 RK126 male alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 1 46752742 179661074 1 11 104 3 1 0 0 7 0.11 0 3 0 0 NA NA NA 7 4 5 35.53 35.68 64.32 1 2 3 Whitelist LIRI-JP 0.62 0 0 0 0.48 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 15 0.07 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 2 105855679 240854410 1 6 104 3 0 0 0 3 0.03 0.28 6 0 0 6 6 6 7 7 7 35.53 29.83 70.08 0 1 2 Whitelist LIRI-JP 0.54 0.53 0 0 0.33 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 9 0.04 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 3 9003761 159875510 1 7 104 4 1 0 0 2 0.04 0.44 3 0 0 NA NA NA NA NA NA 35.53 0.09 99.78 0 2 3 Whitelist LIRI-JP 0.62 0.69 0 0 0.36 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 12 0.06 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 4 17949399 136967833 1 9 104 3 0 0 0 6 0.03 0.43 3 0 0 NA NA NA NA NA NA 35.53 93.34 4.12 0 1 2 Whitelist LIRI-JP 0.62 0.68 0 0 0.33 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 12 0.06 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 5 29106062 90650586 1 4 104 1 1 0 0 2 0.57 0.31 3 0 0 NA NA NA NA NA NA 35.53 0.15 99.72 0 2 3 Whitelist LIRI-JP 0.68 0.56 0 0 0.64 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 6 163160163 163999147 1 1 104 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA 9 3 4 35.53 96.74 0.43 0 0 1 Whitelist LIRI-JP 0.62 0.34 0 NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 7 10059100 10182023 1 1 104 1 0 0 0 0 0.39 0.83 1 0 NA NA NA NA NA NA NA 35.53 0 99.78 0 2 NA Whitelist LIRI-JP 0.62 0.97 0 NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 8 112258877 138445712 2 6 104 1 0 2 1 2 0.57 0 3 0 0 NA NA NA 10 5 5 35.53 30.41 66.16 0 2 1 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 10 0.05 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 9 NA NA 0 0 104 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 10 12337946 45832779 1 4 104 1 1 0 0 2 0.57 0.48 2 0 0 NA NA NA NA NA NA 35.53 0.15 99.67 0 2 3 Whitelist LIRI-JP 0.68 0.73 0 0 0.64 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 11 112656517 112691278 1 1 104 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 6 6 6 35.53 17.8 81.77 0 1 2 Whitelist LIRI-JP 0.62 0.04 0 NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 12 85767095 86390612 1 1 104 0 0 1 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 35.53 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 13 25089584 107280068 1 8 104 3 0 0 0 5 0.03 0.01 2 0 0 NA NA NA 4 4 4 35.53 16.56 83.44 0 2 3 Whitelist LIRI-JP 0.87 0.05 0 0 0.33 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 11 0.05 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 14 NA NA 0 0 104 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 15 NA NA 0 0 104 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 16 46901177 60866657 1 2 104 0 0 1 0 1 0.39 0.21 3 0 0 NA NA NA NA NA NA 35.53 99.7 0.19 0 1 2 Whitelist LIRI-JP 0.68 0.43 0 0 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 3 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 17 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 18 NA NA 0 0 104 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 19 19131234 19154164 1 1 104 1 0 0 0 0 0.39 0.06 1 0.03 NA NA NA NA NA NA NA 35.53 14.76 85.07 0 2 NA Whitelist LIRI-JP 0.62 0.18 0.03 NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 20 59413700 59541445 1 1 104 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 35.53 0.2 98.83 0 1 2 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 21 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 22 29337753 29411885 1 1 104 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 35.53 88.89 0 0 1 NA Whitelist LIRI-JP 0.62 0.6 NA NA 0.59 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK128 X 90971158 145907124 1 3 104 0 1 0 1 1 0.57 0.82 2 0 0 NA NA NA NA NA NA 35.53 99.79 0.21 0 1 2 Whitelist LIRI-JP 0.62 0.96 0 0 0.64 0 No LIRI-JP RK128 LIRI 0.91 1.72 Liver-HCC NA 5 0.02 NA 2 LIRI-JP DO23537 RK128 male deceased C22 79 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK130 1 81395313 187694748 1 5 68 0 1 1 0 3 0.57 0.07 13 0 0 13 5 10 15 5 5 32.61 71.93 25.03 0 3 2 Whitelist LIRI-JP 0.62 0.2 0 0 0.64 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 7 0.05 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 2 81187590 81198928 1 1 68 0 0 1 0 0 0.39 0.66 1 0 NA NA NA NA NA NA NA 32.61 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.87 0 NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 3 NA NA 0 0 68 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.48 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 4 35596147 59528170 3 5 68 1 2 0 0 2 0.3 0.81 5 0 0 5 3 5 7 3 3 32.61 94.22 3.41 0 1 6 Whitelist LIRI-JP 1 0.62 0.95 0 0 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 5 NA NA 0 0 68 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 6 NA NA 0 0 68 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 7 96283724 96299978 1 1 68 0 0 0 1 0 0.39 0.59 1 NA NA NA NA NA 4 0 4 32.61 20.64 79.13 0 1 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 8 106914800 106931124 1 1 68 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.61 95.59 0.99 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 9 91743007 91755086 1 1 68 0 0 0 1 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 32.61 17.09 82.21 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 10 5007378 5044210 1 1 68 0 0 0 1 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 32.61 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 11 98073900 131896731 29 29 68 4 6 10 9 0 0.37 0 33 0 0 33 10 10 40 10 12 32.61 61.45 38.13 0 1 3 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 High confidence LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC With other complex events 58 0.43 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 12 NA NA 0 0 68 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 13 62256486 62299911 1 1 68 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 32.61 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 14 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 16 342189 358196 1 1 68 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA 4 0 3 32.61 73.01 22.47 0 1 NA Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 17 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 18 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 19 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK130 X NA NA 0 0 68 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK130 LIRI 0.79 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45239 RK130 male alive C22 42 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK131 1 NA NA 0 0 8 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 2 NA NA 0 0 8 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 3 188686911 188836354 1 1 8 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 28.23 0.08 99.81 0 1 2 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 2 0.12 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 4 NA NA 0 0 8 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 7 49608230 49657984 1 1 8 0 0 1 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 28.23 97.3 0 0 3 NA Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 2 0.12 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 9 15790503 15958790 1 1 8 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 28.23 0.12 99.21 0 1 2 Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 2 0.12 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 12 NA NA 0 0 8 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 14 21293329 21318775 1 1 8 0 1 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 28.23 99.09 0 0 3 NA Whitelist LIRI-JP 0.62 0.46 NA NA 0.59 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 2 0.12 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 20 NA NA 0 0 8 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.37 NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK131 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK131 LIRI 0.86 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23538 RK131 male alive C22 67 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK133 1 NA NA 0 0 63 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 2 137235198 242500104 1 6 63 3 0 0 2 1 0.14 0.37 7 0 0 7 7 7 7 7 7 28.12 0.76 99.14 0 2 1 Whitelist LIRI-JP 0.54 0.62 0 0 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 11 0.09 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 3 104098634 161985323 1 3 63 1 0 0 2 0 0.3 1 1 0 0 NA NA NA NA NA NA 28.12 0 99.84 0 2 NA Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 4 41540045 170488844 1 3 63 2 0 1 0 0 0.3 0.32 4 0 0 4 4 4 5 5 5 28.12 0.06 99.92 0 1 2 Whitelist LIRI-JP 0.62 0.57 0 0 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 5 43921285 66259916 1 2 63 1 0 1 0 0 0.57 0.02 6 0 0 6 3 4 9 5 5 28.12 96.99 0.25 0 2 3 Whitelist LIRI-JP 0.68 0.07 0 0 0.64 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 6 53628415 137176292 1 2 63 0 0 1 0 1 0.39 0.43 2 0 0 NA NA NA NA NA NA 28.12 50.94 48.83 0 1 2 Whitelist LIRI-JP 0.54 0.68 0 0 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 3 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 7 119548116 119568662 1 1 63 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 28.12 99.8 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 8 19286003 61229073 1 2 63 1 0 0 1 0 0.57 0.14 5 0 0 5 0 4 7 3 3 28.12 96.58 0 0 3 0 Whitelist LIRI-JP 0.68 0.33 0 0 0.64 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 9 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 10 22368444 22378870 1 1 63 0 0 0 1 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 28.12 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 11 67993622 85318781 1 2 63 1 1 0 0 0 0.57 0.54 1 0 0 NA NA NA 4 0 3 28.12 10.03 86.49 0 2 NA Whitelist LIRI-JP 0.68 0.77 0 0 0.64 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 12 63763186 63773832 1 1 63 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.12 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 13 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 14 28699020 68437801 1 3 63 2 0 0 1 0 0.3 0.14 1 0 0 NA NA NA NA NA NA 28.12 0 84.09 0 2 NA Whitelist LIRI-JP 0.62 0.33 0 0 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 15 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 16 NA NA 0 0 63 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 17 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 18 6118825 42591067 1 2 63 2 0 0 0 0 0.11 0.24 4 0 0 4 4 4 5 5 5 28.12 0.47 99.52 0 1 2 Whitelist LIRI-JP 0.54 0.48 0 0 0.48 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 19 50718199 58102498 1 2 63 1 0 1 0 0 0.57 0.13 2 0 0 NA NA NA 5 3 3 28.12 0.17 92.22 0 1 2 Whitelist LIRI-JP 0.68 0.32 0 0 0.64 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 20 7144659 7157554 1 1 63 0 0 0 1 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 28.12 0 98.95 0 2 NA Whitelist LIRI-JP 0.62 0.64 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 21 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 22 17298554 17316427 1 1 63 0 0 0 1 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 28.12 0 76.22 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK133 X 20192354 20244265 1 1 63 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 28.12 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK133 LIRI 0.35 2.13 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45241 RK133 male alive C22 49 1080 NA NA Included Liver-HCC LIRI JP 1 35.53 LIRI-JP::RK134 1 110606367 110628020 1 1 70 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA 4 3 3 19.34 42.43 57.57 0 1 2 Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 2 233191746 233305023 1 1 70 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 19.34 0 99.91 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 3 NA NA 0 0 70 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.48 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 4 67524470 97225170 1 1 70 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 19.34 15.54 84.45 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 5 43924533 43937140 1 1 70 0 0 1 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 19.34 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 6 5453582 167821349 1 5 70 3 1 0 0 1 0.11 0.2 7 0 0 7 4 7 7 4 4 19.34 99.74 0 0 3 1 Whitelist LIRI-JP 0.45 0.42 0 0 0.48 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 9 0.06 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 7 79572465 79583810 1 1 70 1 0 0 0 0 0.39 0.43 1 0 NA NA NA NA NA NA NA 19.34 0 99.74 0 2 NA Whitelist LIRI-JP 0.62 0.68 0 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 8 NA NA 0 0 70 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 9 127644441 127725368 1 1 70 1 0 0 0 0 0.39 0.35 2 0.02 NA NA NA NA NA NA NA 19.34 0.06 99.3 0 1 2 Whitelist LIRI-JP 0.62 0.61 0.02 NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 10 27419499 47698747 1 2 70 1 0 0 1 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 19.34 0 99.81 0 2 NA Whitelist LIRI-JP 0.68 0.5 0 0 0.64 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 11 NA NA 0 0 70 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 0 NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 12 111596129 111803965 2 2 70 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 5 5 5 19.34 0.34 99.65 0 1 2 Whitelist LIRI-JP 0.68 0.15 0 0 0.64 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 13 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 14 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 15 NA NA 0 0 70 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 16 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 17 NA NA 0 0 70 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.31 0 NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 18 76560613 76573711 1 1 70 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.34 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 19 NA NA 0 0 70 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.16 0 NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 20 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 21 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 22 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK134 X 117125148 117344142 1 1 70 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 19.34 99.86 0.14 0 1 2 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK134 LIRI 0.81 1.9 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 LIRI-JP DO23539 RK134 male alive C22 77 1110 NA NA Included Liver-HCC LIRI JP 1 36.51 LIRI-JP::RK135 1 NA NA 0 0 192 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 0 NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 2 NA NA 0 0 192 0 0 0 0 0 NA 0 NA 0.25 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0.25 NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 3 59339734 59818111 1 1 192 0 1 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 26.49 0.24 99.62 0 2 3 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 4 2691135 3700980 1 3 192 0 1 0 0 2 0.39 0 3 NA 0 NA NA NA NA NA NA 26.49 0.07 99.92 0 2 4 Whitelist LIRI-JP 0.62 0.01 NA 0 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 5 93945983 121620600 1 2 192 1 0 1 0 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 26.49 0 99.86 0 2 NA Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 6 1945689 2119000 1 1 192 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA 4 4 4 26.49 17.03 82.82 0 2 3 Whitelist LIRI-JP 0.62 0.45 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 7 140141408 140192675 2 2 192 0 0 1 1 0 0.57 0.2 1 0 0 NA NA NA 6 3 3 26.49 39.97 59.96 0 3 NA Whitelist LIRI-JP 0.68 0.42 0 0 0.64 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 8 124217126 136178634 27 78 192 7 8 5 7 51 0.87 0 29 0 0 29 4 6 50 8 8 26.49 86.02 13.46 0 4 12 Whitelist LIRI-JP 0.75 0 0 0 0.91 0 Low confidence LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC With other complex events 105 0.27 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 9 28305848 28321816 1 1 192 1 0 0 0 0 0.39 0.71 1 0 NA NA NA NA NA NA NA 26.49 0 99.3 0 2 NA Whitelist LIRI-JP 0.62 0.9 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 10 3424184 92354299 1 3 192 1 0 1 0 1 0.57 0.86 4 0 0 4 3 4 4 3 3 26.49 42.33 57.51 0 1 0 Whitelist LIRI-JP 0.62 1 0 0 0.64 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 5 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 11 65198830 65215844 1 1 192 1 0 0 0 0 0.39 0.23 1 0 NA NA NA NA NA NA NA 26.49 0 99.45 0 2 NA Whitelist LIRI-JP 0.62 0.46 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 12 46212114 46358394 1 1 192 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 26.49 51.4 48.51 0 2 NA Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 13 NA NA 0 0 192 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 14 31416617 39741028 6 45 192 1 1 3 1 39 0.57 0 16 0 0 16 4 6 26 4 4 26.49 98.98 0.14 0 3 1 Whitelist LIRI-JP 0.79 0 0 0 0.64 0 Low confidence LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC With other complex events 51 0.13 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 15 41465825 41479529 2 2 192 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA NA NA NA 26.49 15.41 79.71 0 2 NA Whitelist LIRI-JP 0.68 0.96 0 0 0.64 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 16 NA NA 0 0 192 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.21 NA NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 17 48836957 48933630 1 1 192 0 1 0 0 0 0.39 0.82 1 0 NA NA NA NA NA NA NA 26.49 26.22 73.76 0 2 NA Whitelist LIRI-JP 0.62 0.96 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 18 30536840 77549597 1 3 192 0 1 0 0 2 0.39 0.5 2 NA 0 NA NA NA 4 4 4 26.49 28.81 65.87 1 2 3 Whitelist LIRI-JP 0.62 0.74 NA 0 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 4 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 19 12080044 14424210 1 1 192 0 1 0 0 0 0.39 0.29 2 0 NA NA NA NA 5 4 5 26.49 21.09 71.64 0 1 2 Whitelist LIRI-JP 0.62 0.53 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 20 35188617 35235120 1 1 192 1 0 0 0 0 0.39 0.8 1 0 NA NA NA NA NA NA NA 26.49 0 99.01 0 2 NA Whitelist LIRI-JP 0.62 0.95 0 NA 0.59 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 21 NA NA 0 0 192 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 22 NA NA 0 0 192 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 0 NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK135 X NA NA 0 0 192 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 NA NA NA 0 No LIRI-JP RK135 LIRI 0.7 1.9 Liver-HCC NA 0 0 frameshift_deletion,17_7578239_-_C,CN:1 1 LIRI-JP DO23540 RK135 male alive C22 73 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK136 1 897065 31406395 2 5 21 0 1 0 1 3 0.57 0 1 0 0 NA NA NA NA NA NA 9.95 37.12 62.87 0 2 NA Whitelist LIRI-JP 0.62 0.01 0 0 0.64 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 7 0.17 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 2 123651830 123733461 1 1 21 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.95 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 8 22097482 22110104 1 1 21 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 9.95 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.54 NA NA 0.59 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 9 NA NA 0 0 21 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 12 25428623 25449121 1 3 21 0 0 0 1 2 0.39 0.02 1 0 0 NA NA NA NA NA NA 9.95 0.17 96.09 0 2 NA Whitelist LIRI-JP 0.62 0.06 0 0 0.59 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 13 43144513 90544890 2 2 21 0 0 1 1 0 0.57 0.01 4 0 0 4 4 4 7 7 7 9.95 39.5 60.5 0 1 2 Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 19 31689347 49139969 1 1 21 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 9.95 29.51 70.31 0 1 2 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 22 28323665 28886848 2 5 21 0 0 1 1 3 0.57 0 1 0 0 NA NA NA NA NA NA 9.95 0 100 0 2 NA Whitelist LIRI-JP 0.62 0 0 0 0.64 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 7 0.17 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK136 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK136 LIRI 0.64 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48689 RK136 male alive C22 63 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK137 1 67917490 68189314 2 2 43 0 0 0 2 0 0.11 0.39 3 0 0 NA NA NA 8 3 7 28.09 42.52 57.48 0 2 3 Whitelist LIRI-JP 0.54 0.63 0 0 0.48 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 2 81187946 230032401 1 2 43 1 0 1 0 0 0.57 0.58 5 NA 0 5 3 5 5 3 3 28.09 0.06 99.82 0 2 1 Whitelist LIRI-JP 0.68 0.8 NA 0 0.64 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 3 186265426 186332609 1 1 43 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 28.09 0.01 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 4 36096500 36233529 1 1 43 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 28.09 0.07 99.91 0 1 2 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 5 119881379 129533239 6 6 43 2 0 2 2 0 0.57 0 1 0 0 NA NA NA 7 5 5 28.09 0.19 97.14 0 2 NA Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 12 0.14 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 8 42455992 79843249 1 2 43 1 0 0 1 0 0.57 1 3 NA 0 NA NA NA 4 0 0 28.09 96.14 0.44 0 2 3 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 16 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 17 2039238 18611038 7 8 43 3 2 1 1 1 0.67 0 5 0 0 5 5 5 10 10 10 28.09 25.06 74.93 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.74 0 Low confidence LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA Canonical without polyploidization 15 0.17 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 18 1672466 9321127 9 10 43 3 1 3 2 1 0.75 0 1 0 0 NA NA NA NA NA NA 28.09 99.96 0 0 1 NA Whitelist LIRI-JP 0.96 0 0 0 0.83 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 19 0.22 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 19 47490605 48333186 1 1 43 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 28.09 1.42 98.4 0 1 2 Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 20 NA NA 0 0 43 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 21 45665834 45701270 1 1 43 0 1 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 28.09 0.07 77.54 0 2 3 Whitelist LIRI-JP 0.62 0.66 NA NA 0.59 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK137 X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK137 LIRI 0.5 2.3 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45243 RK137 female alive C22 74 930 NA NA Included Biliary-AdenoCA LIRI JP 1 30.59 LIRI-JP::RK139 1 181903709 181946976 2 2 19 0 0 1 1 0 0.57 0.18 2 0 0 NA NA NA 6 4 4 25.63 66.37 33.62 0 2 3 Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 4 NA NA 0 0 19 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 5 20274055 65693762 1 2 19 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 25.63 0.04 99.83 0 1 2 Whitelist LIRI-JP 0.54 0.59 NA 0 0.48 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 6 83528558 83643291 1 1 19 0 0 1 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 25.63 56.75 43.1 0 1 NA Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 10 NA NA 0 0 19 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 11 NA NA 0 0 19 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 12 26475163 26717761 1 1 19 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA 4 4 4 25.63 17.19 82.72 0 1 2 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 13 96332486 96419050 1 1 19 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 25.63 16.36 80.87 0 1 NA Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 14 31368154 94136879 1 6 19 4 0 0 1 1 0.04 0 4 0 0 4 4 4 6 5 6 25.63 0.39 95.9 0 1 2 Whitelist LIRI-JP 0.54 0 0 0 0.36 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 11 0.29 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 18 NA NA 0 0 19 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK139 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK139 LIRI 0.23 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48691 RK139 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK140 1 5559695 8772273 5 5 36 3 0 1 1 0 0.28 0.02 4 0 0 4 4 4 11 5 5 27.51 19.39 80.6 1 1 2 Whitelist LIRI-JP 0.62 0.08 0 0 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 10 0.14 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 2 179962513 183126427 2 2 36 0 0 1 1 0 0.57 0.54 4 0 0 4 4 4 5 5 5 27.51 0.04 99.85 0 1 2 Whitelist LIRI-JP 0.68 0.77 0 0 0.64 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 3 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 4 1753374 1819999 1 1 36 0 1 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 27.51 0 99.78 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 5 82518428 82589484 1 1 36 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.51 99.85 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 6 80828265 130575910 1 4 36 3 0 1 0 0 0.11 0.06 5 0 0 5 5 5 5 5 5 27.51 0.27 99.59 0 2 1 Whitelist LIRI-JP 0.54 0.19 0 0 0.48 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 8 0.11 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 7 NA NA 0 0 36 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 8 NA NA 0 0 36 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 9 80100665 80179688 1 1 36 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 27.51 0.06 99.28 0 1 2 Whitelist LIRI-JP 0.62 0.86 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 10 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 11 24649545 24736726 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.51 0.06 99.51 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 12 7007128 20837700 1 2 36 0 0 1 1 0 0.57 0.69 1 NA 0 NA NA NA NA NA NA 27.51 0 99.92 0 2 NA Whitelist LIRI-JP 0.68 0.89 NA 0 0.64 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 16 NA NA 0 0 36 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.84 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 17 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 19 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 20 49203958 49219901 1 1 36 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 4 4 4 27.51 39.07 52.35 0 1 2 Whitelist LIRI-JP 0.62 0.14 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 22 NA NA 0 0 36 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK140 X 21416284 21494757 1 1 36 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 27.51 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK140 LIRI 0.42 2.09 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23541 RK140 male alive C22 65 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK141 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 2 NA NA 0 0 30 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 3 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 4 16653236 16672629 1 1 30 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 24.39 0.03 99.76 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 6 63658682 134453042 9 13 30 3 1 3 2 4 0.75 0 18 0 0 18 5 7 22 5 6 24.39 97.17 0 0 1 4 Whitelist LIRI-JP 0.9 0 0 0 0.83 0 Low confidence LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC With other complex events 22 0.37 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 7 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 8 38430109 112072076 1 4 30 0 2 0 0 2 0.11 0 10 0 0 10 3 6 14 3 6 24.39 96.58 0 0 5 4 Whitelist LIRI-JP 0.62 0 0 0 0.48 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 6 0.1 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 9 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 10 NA NA 0 0 30 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 11 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 12 NA NA 0 0 30 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 13 107381914 107700326 1 1 30 1 0 0 0 0 0.39 0.08 2 0 NA NA NA NA NA NA NA 24.39 0.28 99.72 0 1 2 Whitelist LIRI-JP 0.62 0.24 0 NA 0.59 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 14 NA NA 0 0 30 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 18 NA NA 0 0 30 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 21 NA NA 0 0 30 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.56 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 22 NA NA 0 0 30 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK141 X NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK141 LIRI 0.7 2.08 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45247 RK141 female alive C22 31 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK142 1 1138581 66347938 34 86 168 7 10 11 6 52 0.57 0 26 0 0 26 14 26 50 15 15 19.14 33.46 66.53 1 2 1 Whitelist LIRI-JP 0.91 0 0 0 0.64 1 High confidence LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA With other complex events 120 0.36 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 2 NA NA 0 0 168 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 3 26692507 70583755 1 2 168 2 0 0 0 0 0.11 0.01 4 0 0 4 4 4 5 5 5 19.14 21.87 78.08 0 1 2 Whitelist LIRI-JP 0.54 0.06 0 0 0.48 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 4 71079659 160193563 1 4 168 1 0 2 1 0 0.57 0.06 3 0 0 NA NA NA NA NA NA 19.14 0.21 99.76 0 2 1 Whitelist LIRI-JP 0.68 0.19 0 0 0.64 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 8 0.02 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 5 19747649 20150285 2 2 168 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 19.14 0 97.24 0 2 NA Whitelist LIRI-JP 0.68 0.13 0 0 0.64 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 6 69355976 168353511 1 1 168 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 19.14 57.85 42.02 0 1 2 Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 7 NA NA 0 0 168 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.04 NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 8 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 9 37948134 38049610 1 1 168 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 19.14 47.02 52.82 0 1 NA Whitelist LIRI-JP 0.62 0.07 NA NA 0.59 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 10 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 11 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 12 83946492 99520902 1 1 168 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 5 3 3 19.14 11.8 84.45 0 1 2 Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 13 19523914 89786266 2 2 168 0 0 1 1 0 0.57 0.14 2 NA 0 NA NA NA NA NA NA 19.14 43.72 53.48 0 1 2 Whitelist LIRI-JP 0.68 0.33 NA 0 0.64 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 14 21707781 107204434 30 79 168 7 6 8 9 49 0.88 0 41 0 0 41 41 41 42 42 42 19.14 45.94 53.92 1 1 2 Whitelist LIRI-JP 1 0.96 0 0 0 0.91 1 High confidence LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA Canonical without polyploidization 109 0.32 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 15 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 16 NA NA 0 0 168 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 17 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 18 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 19 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 20 23565289 23585030 1 1 168 0 0 0 1 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 19.14 0 99.02 0 2 NA Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 21 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 22 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK142 X NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK142 LIRI 0.22 1.81 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45249 RK142 male alive C22 57 630 NA NA Included Biliary-AdenoCA LIRI JP 1 20.72 LIRI-JP::RK143 1 50924636 51026553 1 1 26 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 6 3 3 15.02 42.43 57.57 0 1 2 Whitelist LIRI-JP 0.62 0.16 0 NA 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 2 NA NA 0 0 26 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.72 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 3 13239161 13433929 1 5 26 0 1 0 0 4 0.39 0.01 3 0.02 0 NA NA NA 5 3 5 15.02 22.72 77.12 0 1 3 Whitelist LIRI-JP 0.93 0.04 0.02 0 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 5 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 6 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 7 NA NA 0 0 26 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 8 141768802 141895201 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 6 15.02 96.23 0.23 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 9 98235458 120050334 1 3 26 1 0 0 0 2 0.39 0.08 4 NA 0 4 4 4 5 5 5 15.02 15.22 84.08 0 1 2 Whitelist LIRI-JP 0.87 0.23 NA 0 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 11 NA NA 0 0 26 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.11 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 12 46006139 47121189 1 2 26 2 0 0 0 0 0.11 0.35 2 NA 0 NA NA NA NA NA NA 15.02 0.83 99.08 0 1 2 Whitelist LIRI-JP 0.54 0.6 NA 0 0.48 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 13 94848844 94952386 1 1 26 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 15.02 0.09 99.91 0 2 3 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 17 17972974 36890444 1 2 26 0 2 0 0 0 0.11 0.16 2 NA 0 NA NA NA NA NA NA 15.02 0.25 99.75 0 2 3 Whitelist LIRI-JP 0.54 0.36 NA 0 0.48 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 18 NA NA 0 0 26 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.36 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 19 NA NA 0 0 26 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 20 NA NA 0 0 26 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 22 41909254 42121191 1 1 26 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 15.02 0.41 99.59 0 2 3 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK143 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK143 LIRI 0.76 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23542 RK143 male alive C22 66 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK144 1 32412912 32426843 1 1 11 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA 4 4 4 22.99 42.32 57.68 0 2 NA Whitelist LIRI-JP 0.62 0.16 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 3 14598014 15325779 1 1 11 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 22.99 99.88 0 0 3 5 Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 4 53596050 54002362 1 1 11 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 22.99 0.21 96.95 0 2 3 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 8 97894937 100007842 1 1 11 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 22.99 99.89 0 0 3 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 9 21992803 107406410 1 2 11 2 0 0 0 0 0.11 0.07 1 NA 0 NA NA NA NA NA NA 22.99 0.2 99.62 0 2 NA Whitelist LIRI-JP 0.54 0.2 NA 0 0.48 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 4 0.18 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 16 2228099 2352085 1 1 11 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 22.99 0.14 99.75 0 2 4 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 17 4060541 4237767 1 1 11 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA 4 3 3 22.99 3.2 96.75 0 2 3 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 20 NA NA 0 0 11 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 22 43620819 43665296 1 1 11 0 1 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 22.99 3.14 96.86 0 2 NA Whitelist LIRI-JP 0.62 0.31 NA NA 0.59 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK144 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK144 LIRI 0.5 2.13 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48692 RK144 female alive C22 77 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK145 1 51410991 51452910 1 1 26 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 31.87 42.66 57.34 0 2 NA Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 2 55032767 55118787 1 1 26 1 0 0 0 0 0.39 0.48 1 0 NA NA NA NA NA NA NA 31.87 99.9 0 0 3 NA Whitelist LIRI-JP 0.62 0.72 0 NA 0.59 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 3 98523639 121592080 1 2 26 2 0 0 0 0 0.11 0.7 1 NA 0 NA NA NA NA NA NA 31.87 0 99.86 0 2 NA Whitelist LIRI-JP 0.54 0.9 NA 0 0.48 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 4 54116023 54200905 2 2 26 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA NA NA NA 31.87 0 99.99 0 2 NA Whitelist LIRI-JP 0.54 0.03 0 0 0.48 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 5 64825405 105120412 1 2 26 2 0 0 0 0 0.11 0.68 1 NA 0 NA NA NA 5 3 3 31.87 11.19 88.68 0 2 NA Whitelist LIRI-JP 0.54 0.88 NA 0 0.48 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 6 101068085 101219949 1 1 26 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 31.87 0 99.76 0 2 NA Whitelist LIRI-JP 0.62 0.2 0 NA 0.59 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 7 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 10 65005892 121274699 1 2 26 1 1 0 0 0 0.57 0.34 3 NA 0 NA NA NA NA NA NA 31.87 0.19 99.73 0 2 3 Whitelist LIRI-JP 0.68 0.59 NA 0 0.64 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 11 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 14 NA NA 0 0 26 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 15 57733279 57796312 1 1 26 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 31.87 0.15 99.67 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 16 NA NA 0 0 26 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.36 NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 22 20135370 20278027 1 1 26 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 31.87 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK145 X NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK145 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO23543 RK145 male alive C22 63 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK146 1 105101519 170999862 1 3 79 1 0 0 2 0 0.3 0.03 3 0 0 NA NA NA 4 4 4 17.03 100 0 0 5 1 Whitelist LIRI-JP 0.62 0.12 0 0 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 6 0.04 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 2 166257653 166434806 1 1 79 1 0 0 0 0 0.39 0.41 2 0 NA NA NA NA NA NA NA 17.03 0.07 99.82 0 1 2 Whitelist LIRI-JP 0.62 0.66 0 NA 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 3 102815630 175653631 1 2 79 0 0 0 2 0 0.11 0.82 1 0 0 NA NA NA NA NA NA 17.03 1.58 98.28 0 2 NA Whitelist LIRI-JP 0.54 0.96 0 0 0.48 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 4 0.03 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 4 24841860 116312949 1 2 79 0 1 1 0 0 0.57 0.11 1 0 0 NA NA NA NA NA NA 17.03 0 99.47 0 2 NA Whitelist LIRI-JP 0.68 0.28 0 0 0.64 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 4 0.03 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 5 8225743 161612971 1 4 79 2 0 1 1 0 0.57 1 5 0 0 5 3 5 5 3 3 17.03 28.16 68.66 0 2 1 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 8 0.05 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 6 76457475 161636909 2 2 79 1 0 0 1 0 0.57 1 6 0 0 6 6 6 7 7 7 17.03 49.24 50.59 0 1 2 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 4 0.03 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 7 49083317 63982339 1 2 79 0 0 0 2 0 0.11 0.8 1 0 0 NA NA NA NA NA NA 17.03 0 99.78 0 2 NA Whitelist LIRI-JP 0.54 0.95 0 0 0.48 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 4 0.03 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 8 47771032 106931496 1 3 79 0 0 1 1 1 0.57 0 1 0 0 NA NA NA NA NA NA 17.03 100 0 0 5 NA Whitelist LIRI-JP 0.87 0.01 0 0 0.64 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 5 0.03 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 9 NA NA 0 0 79 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 10 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 11 NA NA 0 0 79 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.94 0 NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 12 77425253 78077997 4 4 79 1 1 1 1 0 1 0.28 5 0 0 5 5 5 5 5 5 17.03 0.21 99.71 0 2 1 Whitelist LIRI-JP 1 0.52 0 0 1 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 8 0.05 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 13 NA NA 0 0 79 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 14 67866484 68227822 1 1 79 0 1 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 17.03 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 15 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 16 NA NA 0 0 79 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 17 NA NA 0 0 79 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 18 71757130 71768225 1 1 79 0 0 0 1 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 17.03 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 19 58084034 58102414 1 1 79 0 0 1 0 0 0.39 0.2 1 0 0 NA NA NA NA NA NA 17.03 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.43 0 0 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 20 7144202 7157768 1 1 79 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.03 0 99.06 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 22 NA NA 0 0 79 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK146 X NA NA 0 0 79 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.31 0 NA NA 0 No LIRI-JP RK146 LIRI 0.56 2.17 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45251 RK146 female alive C22 57 900 NA NA Included Biliary-AdenoCA LIRI JP 1 29.61 LIRI-JP::RK147 1 162039452 166162835 3 3 52 0 1 1 1 0 0.8 0 7 0 0 7 4 5 29 4 4 22.73 18.11 78.86 0 4 8 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 2 23620174 158257343 1 4 52 2 2 0 0 0 0.26 1 8 0 0 8 5 8 9 5 5 22.73 3.68 96.21 2 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 8 0.08 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 3 14721913 15011686 1 1 52 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 22.73 0.15 99.73 0 2 3 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 4 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 5 95057638 149182955 1 3 52 0 3 0 0 0 0.03 0.14 8 0 0 8 8 8 12 9 9 22.73 2.37 94.59 0 2 3 Whitelist LIRI-JP 0.41 0.34 0 0 0.33 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 6 38689559 71572726 3 6 52 1 0 1 1 3 0.8 0 9 0 0 9 3 6 10 3 3 22.73 61.07 35.95 0 2 3 Whitelist LIRI-JP 0.93 0.01 0 0 0.84 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 9 0.09 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 8 30269461 124361822 1 7 52 3 2 1 1 0 0.67 0.02 15 0 0 15 12 15 17 14 14 22.73 85.22 11.35 0 1 2 Whitelist LIRI-JP 0.77 0.07 0 0 0.74 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 14 0.13 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 9 117114490 117320496 1 1 52 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 22.73 0.07 99.2 0 2 NA Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 10 86021696 86146008 1 1 52 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 22.73 15.14 84.75 0 2 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 11 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 12 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 13 76193976 81006068 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 22.73 62.31 37.69 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 14 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 15 45232649 50601916 1 2 52 0 1 1 0 0 0.57 0.17 3 0 0 NA NA NA NA NA NA 22.73 0.31 99.69 0 2 3 Whitelist LIRI-JP 0.68 0.39 0 0 0.64 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 17 73876843 76910402 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 22.73 95.55 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 19 4139356 4160681 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 22.73 20.11 79.72 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 20 36756527 60979583 1 2 52 0 2 0 0 0 0.11 0.31 1 NA 0 NA NA NA NA NA NA 22.73 0 99.02 0 2 NA Whitelist LIRI-JP 0.54 0.56 NA 0 0.48 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 22 31631321 35881804 1 2 52 0 2 0 0 0 0.11 0.13 3 NA 0 NA NA NA NA NA NA 22.73 1.42 98.58 0 2 3 Whitelist LIRI-JP 0.54 0.32 NA 0 0.48 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK147 X NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK147 LIRI 0.68 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45253 RK147 male alive C22 50 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK148 1 243362004 243610011 2 2 195 2 0 0 0 0 0.11 0.03 1 0 0 NA NA NA 27 17 17 7.62 0.6 99.4 0 2 NA Whitelist LIRI-JP 0.54 0.12 0 0 0.48 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 2 3200361 3454200 3 3 195 0 1 1 1 0 0.8 1 3 0 0 NA NA NA 21 21 21 7.62 0.75 99.15 0 2 1 Whitelist LIRI-JP 0.87 1 0 0 0.84 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 3 60222343 188494585 1 6 195 6 0 0 0 0 0 0.07 6 0 0 6 6 6 7 7 7 7.62 0.28 99.68 0 1 2 Whitelist LIRI-JP 0.04 0.2 0 0 0.03 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 4 9821262 174344791 1 6 195 6 0 0 0 0 0 0.04 4 0 0 4 4 4 5 5 5 7.62 0.13 99.84 4 1 2 Whitelist LIRI-JP 0.04 0.15 0 0 0.03 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 5 42562425 154180295 1 10 195 10 0 0 0 0 0 0.88 11 0 0 11 11 11 11 11 11 7.62 0.31 99.55 0 2 1 Whitelist LIRI-JP 0 1 0 0 0 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 20 0.05 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 6 143408467 143490327 2 2 195 0 0 1 1 0 0.57 0.29 2 0 0 NA NA NA 20 9 9 7.62 33.67 66.02 0 1 2 Whitelist LIRI-JP 0.68 0.54 0 0 0.64 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 7 1042254 150037666 1 12 195 12 0 0 0 0 0 0.42 13 0 0 13 13 13 13 13 13 7.62 0.69 99.28 0 2 1 Whitelist LIRI-JP 0 0.67 0 0 0 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 24 0.06 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 8 17142293 48854869 1 2 195 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA 5 3 3 7.62 8.17 91.71 0 1 2 Whitelist LIRI-JP 0.54 0.03 NA 0 0.48 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 9 21975039 132836763 1 8 195 7 0 1 0 0 0 0.58 11 0 0 11 7 11 12 7 7 7.62 0.85 99.11 0 2 1 Whitelist LIRI-JP 0.06 0.8 0 0 0.04 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 16 0.04 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 10 27355879 121681051 1 7 195 6 0 1 0 0 0 0.73 6 0 0 6 6 6 7 7 7 7.62 0.27 99.65 0 1 2 Whitelist LIRI-JP 0.13 0.91 0 0 0.09 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 11 20050786 20213695 2 2 195 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 10 6 8 7.62 0.8 99.05 0 1 2 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 12 9270007 123718833 1 8 195 8 0 0 0 0 0 1 13 0 0 13 13 13 13 13 13 7.62 0.69 98.73 0 2 1 Whitelist LIRI-JP 0.01 1 0 0 0 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 16 0.04 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 13 38695027 101159241 1 6 195 5 0 1 0 0 0.01 1 10 0 0 10 10 10 11 11 11 7.62 0.62 99.38 0 1 2 Whitelist LIRI-JP 0.25 1 0 0 0.19 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 14 33101844 100726901 1 7 195 6 1 0 0 0 0 0.41 10 0 0 10 9 10 11 9 9 7.62 1.13 98.87 0 2 1 Whitelist LIRI-JP 0.13 0.66 0 0 0.09 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 15 67371085 67405593 2 2 195 2 0 0 0 0 0.11 0.12 3 0 0 NA NA NA 7 5 5 7.62 0.44 99.43 0 2 1 Whitelist LIRI-JP 0.54 0.31 0 0 0.48 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 16 435432 69047837 1 2 195 2 0 0 0 0 0.11 0.5 3 0.18 0 NA NA NA NA NA NA 7.62 0.24 99.66 0 2 1 Whitelist LIRI-JP 0.54 0.74 0.19 0 0.48 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 17 41536382 79640132 1 7 195 7 0 0 0 0 0 0.02 11 0 0 11 11 11 11 11 11 7.62 0.2 99.78 0 2 1 Whitelist LIRI-JP 0.02 0.09 0 0 0.01 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 14 0.04 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 18 13574735 13622511 1 1 195 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 7.62 0.06 99.78 0 1 2 Whitelist LIRI-JP 0.62 0.21 NA NA 0.59 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 19 19147770 56657864 1 3 195 3 0 0 0 0 0.03 1 4 0 0 4 4 4 5 5 5 7.62 0.15 99.68 0 0 2 Whitelist LIRI-JP 0.41 1 0 0 0.33 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 20 14320411 55049347 1 4 195 4 0 0 0 0 0.01 0.32 8 0 0 8 8 8 9 9 9 7.62 1.3 98.57 1 1 2 Whitelist LIRI-JP 0.21 0.57 0 0 0.16 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 8 0.02 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 21 36188233 36247599 1 1 195 1 0 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 7.62 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 22 24848675 42286407 1 9 195 9 0 0 0 0 0 0 16 0 0 16 16 16 17 17 17 7.62 2.34 97.66 0 1 2 Whitelist LIRI-JP 0 0 0 0 0 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 18 0.05 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK148 X 2511173 102219715 1 6 195 6 0 0 0 0 0 0.25 1 0 0 NA NA NA NA NA NA 7.62 100 0 0 1 NA Whitelist LIRI-JP 0.04 0.49 0 0 0.03 0 No LIRI-JP RK148 LIRI 0.9 1.98 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO45255 RK148 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK149 1 192878663 192892486 1 1 28 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 6.97 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 2 174008277 211802043 1 2 28 1 1 0 0 0 0.57 0.51 1 0 0 NA NA NA NA NA NA 6.97 0 97.31 0 2 NA Whitelist LIRI-JP 0.68 0.75 0 0 0.64 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 3 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 4 69646078 69657655 1 1 28 0 0 0 1 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 6.97 0 99.81 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 5 29274216 29317669 1 1 28 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.97 0 97.25 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 7 37350464 37425057 1 1 28 1 0 0 0 0 0.39 0.19 1 0 NA NA NA NA NA NA NA 6.97 38.04 61.74 0 2 NA Whitelist LIRI-JP 0.62 0.41 0 NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 9 20514041 22690130 1 1 28 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 6.97 0 99.32 0 2 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 10 92308523 92368258 1 1 28 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.97 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 11 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 12 NA NA 0 0 28 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 13 89767323 89779897 1 1 28 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 6.97 0 85.85 0 2 NA Whitelist LIRI-JP 0.62 0.21 0 NA 0.59 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 14 NA NA 0 0 28 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 15 NA NA 0 0 28 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 20 7144740 15175802 1 2 28 1 0 0 1 0 0.57 0.12 1 NA 0 NA NA NA NA NA NA 6.97 0 99.02 0 2 NA Whitelist LIRI-JP 0.68 0.31 NA 0 0.64 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 21 NA NA 0 0 28 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK149 X NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.38 NA NA NA 0 No LIRI-JP RK149 LIRI 0.24 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48693 RK149 male alive C22 71 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK150 1 155061833 155287337 1 2 57 0 2 0 0 0 0.11 0.8 4 0 0 4 0 3 4 0 3 5.94 0.09 99.91 0 2 3 Whitelist LIRI-JP 0.54 0.95 0 0 0.48 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 2 196831143 241955202 1 3 57 0 2 0 1 0 0.3 0.14 4 0 0 4 0 3 4 0 3 5.94 0.08 99.83 0 2 3 Whitelist LIRI-JP 0.62 0.34 0 0 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 3 49268801 49506055 1 1 57 0 1 0 0 0 0.39 0.6 2 0 NA NA NA NA NA NA NA 5.94 0.12 99.76 0 2 3 Whitelist LIRI-JP 0.62 0.81 0 NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 4 92000471 135791247 1 3 57 1 0 2 0 0 0.3 0.1 1 0 0 NA NA NA NA NA NA 5.94 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.27 0 0 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 5 91530423 91548618 1 1 57 0 0 1 0 0 0.39 0.41 1 0 NA NA NA NA NA NA NA 5.94 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.65 0 NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 6 NA NA 0 0 57 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 7 75588108 75658551 2 2 57 0 1 1 0 0 0.57 0.23 2 0 0 NA NA NA 5 5 5 5.94 2.42 97.38 0 1 2 Whitelist LIRI-JP 0.68 0.47 0 0 0.64 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 8 115903922 115924806 1 1 57 0 0 1 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 5.94 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 9 21980984 22018465 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.94 0.03 99.27 0 0 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 10 81346321 98841159 1 3 57 0 2 1 0 0 0.3 0.75 3 0 0 NA NA NA NA NA NA 5.94 0.12 99.7 0 2 3 Whitelist LIRI-JP 0.62 0.91 0 0 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 11 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 12 106073039 106130104 1 1 57 0 1 0 0 0 0.39 0.75 2 NA NA NA NA NA 6 3 4 5.94 19.52 80.39 0 2 3 Whitelist LIRI-JP 0.62 0.92 NA NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 14 NA NA 0 0 57 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 15 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 16 10660662 10797512 1 1 57 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.94 0.15 99.74 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 17 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 18 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 22 40586077 40772295 1 1 57 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 5.94 0.36 75.86 0 1 2 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK150 X 72993521 73008370 1 1 57 0 0 1 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 5.94 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.09 0 NA 0.59 0 No LIRI-JP RK150 LIRI 0.74 1.94 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO23544 RK150 male alive C22 67 960 NA NA Included Liver-HCC LIRI JP 1 31.58 LIRI-JP::RK151 1 53972773 54664029 7 7 60 2 3 1 1 0 0.67 0.01 3 0 0 NA NA NA 12 7 7 29.6 40.6 59.39 0 2 3 Whitelist LIRI-JP 0.77 0.03 0 0 0.74 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 14 0.12 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 2 32571346 213335638 1 4 60 3 0 1 0 0 0.11 0.82 4 0 0 4 4 4 5 5 5 29.6 0.18 99.72 0 1 2 Whitelist LIRI-JP 0.54 0.96 0 0 0.48 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 8 0.07 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 3 128627209 181226563 1 3 60 1 1 1 0 0 0.8 0.8 4 0 0 4 3 4 5 3 3 29.6 0.63 99.33 0 2 1 Whitelist LIRI-JP 0.87 0.95 0 0 0.84 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 4 19305439 19596732 1 2 60 2 0 0 0 0 0.11 0.8 4 0.01 0 4 4 4 4 4 4 29.6 10.15 89.84 0 1 2 Whitelist LIRI-JP 0.54 0.95 0.01 0 0.48 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 5 27873346 165124963 1 3 60 0 1 1 1 0 0.8 0.79 6 0 0 6 5 6 7 5 7 29.6 97.31 0 0 4 6 Whitelist LIRI-JP 0.87 0.94 0 0 0.84 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 6 101261086 101393080 1 1 60 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 29.6 0.08 99.78 0 1 2 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 7 81703228 93057910 1 1 60 0 0 0 1 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 29.6 99.78 0 0 3 NA Whitelist LIRI-JP 0.62 0.33 0 NA 0.59 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 8 95934034 96468217 3 3 60 0 0 2 1 0 0.3 0 3 0 0 NA NA NA 9 4 4 29.6 1.16 98.84 0 2 3 Whitelist LIRI-JP 0.62 0.02 0 0 0.59 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 9 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 10 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 11 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 12 56281569 112773467 1 2 60 1 1 0 0 0 0.57 0.76 4 0 0 4 3 4 5 3 3 29.6 0.79 99.13 0 2 1 Whitelist LIRI-JP 0.68 0.92 0 0 0.64 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 13 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 14 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 15 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 16 21188243 32857904 3 3 60 1 0 1 1 0 0.8 0 9 0 0 9 9 9 9 9 9 29.6 92.01 7.89 0 1 2 Whitelist LIRI-JP 0.87 0.01 0 0 0.84 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 17 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 18 36973893 37000487 1 1 60 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.6 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 19 35346689 35917095 3 3 60 1 2 0 0 0 0.3 0.01 2 0 0 NA NA NA 4 0 3 29.6 0.94 98.88 0 2 4 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 20 8158221 51958303 1 2 60 2 0 0 0 0 0.11 0.37 4 NA 0 4 4 4 5 5 5 29.6 97.76 1.17 0 2 3 Whitelist LIRI-JP 0.54 0.62 NA 0 0.48 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK151 X NA NA 0 0 60 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK151 LIRI 0.8 2.08 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 2 LIRI-JP DO23545 RK151 male deceased C22 67 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK152 1 60323200 234621285 1 4 53 1 3 0 0 0 0.11 0.61 4 0 0 4 3 4 4 3 3 29.52 42.42 57.58 0 3 2 Whitelist LIRI-JP 0.54 0.82 0 0 0.48 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 8 0.08 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 2 142297808 142468947 1 1 53 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 29.52 0.08 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 3 36953458 36970606 1 1 53 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 29.52 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 4 185583414 185786760 1 1 53 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 29.52 0 99.81 0 2 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 5 95927244 95982474 1 1 53 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 29.52 99.86 0 0 3 5 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 6 120632332 120666921 1 1 53 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 29.52 0.02 99.84 0 1 2 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 7 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 8 43410563 143686658 11 12 53 4 5 0 2 1 0.15 0 15 0 0 15 6 7 16 6 7 29.52 96.58 0 0 4 6 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 Low confidence LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC With other complex events 23 0.22 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 9 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 10 89297820 89540800 1 1 53 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.52 0.14 96.45 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 11 72753450 114337293 1 3 53 0 2 0 0 1 0.11 0.74 1 NA 0 NA NA NA NA NA NA 29.52 0.66 95.58 1 2 NA Whitelist LIRI-JP 0.62 0.91 NA 0 0.48 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 5 0.05 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 12 46130560 46223299 1 1 53 1 0 0 0 0 0.39 0.31 2 0 NA NA NA NA NA NA NA 29.52 53.2 46.72 0 2 4 Whitelist LIRI-JP 0.62 0.57 0 NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 13 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 14 31600662 31810092 1 1 53 0 1 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 29.52 0 99.12 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 15 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 16 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 17 19681188 22174720 1 4 53 0 0 2 1 1 0.3 0 13 0 0 13 3 5 15 3 4 29.52 94 1.53 0 4 3 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 7 0.07 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 18 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 19 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 20 NA NA 0 0 53 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 21 16163315 40481434 3 3 53 0 1 1 1 0 0.8 0 4 0 0 4 3 4 7 3 6 29.52 77.35 0 0 1 3 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 6 0.06 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 22 26786988 42562311 1 3 53 0 3 0 0 0 0.03 0.03 3 0 0 NA NA NA 4 4 4 29.52 3.58 96.42 0 2 3 Whitelist LIRI-JP 0.41 0.1 0 0 0.33 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 6 0.06 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK152 X NA NA 0 0 53 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK152 LIRI 0.35 2.24 Liver-HCC NA 0 0 NA 4 LIRI-JP DO23546 RK152 male alive C22 63 1050 NA NA Included Liver-HCC LIRI JP 1 34.54 LIRI-JP::RK153 1 101880469 105125465 1 2 188 0 0 2 0 0 0.11 0.22 1 0 0 NA NA NA NA NA NA 5.63 0 100 0 2 NA Whitelist LIRI-JP 0.54 0.46 0 0 0.48 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 2 5683887 123983132 1 2 188 0 0 0 2 0 0.11 0.36 1 0 0 NA NA NA NA NA NA 5.63 0 99.9 0 2 NA Whitelist LIRI-JP 0.54 0.61 0 0 0.48 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 3 68348492 166664889 1 4 188 0 0 1 3 0 0.11 0.57 1 0 0 NA NA NA NA NA NA 5.63 0 99.84 0 2 NA Whitelist LIRI-JP 0.54 0.79 0 0 0.48 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 8 0.02 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 4 47639275 166540475 1 11 188 2 1 4 3 1 0.57 0.02 1 0 0 NA NA NA NA NA NA 5.63 0 99.79 0 2 NA Whitelist LIRI-JP 0.87 0.08 0 0 0.64 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 21 0.06 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 5 36964461 43940329 1 2 188 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 5.63 0 99.88 0 2 NA Whitelist LIRI-JP 0.68 0.16 0 0 0.64 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 6 77621461 97751597 1 1 188 1 0 0 0 0 0.39 0.36 5 0 0 5 5 5 5 5 5 5.63 0.01 99.85 0 2 4 Whitelist LIRI-JP 0.62 0.61 0 0 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 7 9935268 16784507 1 2 188 0 1 0 1 0 0.57 0.63 1 0 0 NA NA NA NA NA NA 5.63 0 99.77 0 2 NA Whitelist LIRI-JP 0.68 0.84 0 0 0.64 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 8 85864426 85874839 1 1 188 0 0 0 1 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 5.63 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.33 0 NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 9 23152641 137180625 1 4 188 1 2 0 1 0 0.57 0.18 4 0 0 4 4 4 4 4 4 5.63 2.85 97.01 0 2 4 Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 8 0.02 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 10 NA NA 0 0 188 0 0 0 0 0 NA 0.73 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 0 NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 11 90904313 114558788 1 2 188 0 0 1 1 0 0.57 0.73 1 0 0 NA NA NA NA NA NA 5.63 0 99.57 0 2 NA Whitelist LIRI-JP 0.68 0.9 0 0 0.64 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 12 18060386 18079053 1 1 188 0 0 1 0 0 0.39 0.86 1 0 NA NA NA NA NA NA NA 5.63 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 13 63568075 63578238 1 1 188 0 0 0 1 0 0.39 0.42 1 0 NA NA NA NA 4 4 4 5.63 15.14 82.08 0 2 NA Whitelist LIRI-JP 0.62 0.67 0 NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 14 40648757 40663558 1 1 188 0 0 1 0 0 0.39 0.4 1 0 NA NA NA NA NA NA NA 5.63 0 99.12 0 2 NA Whitelist LIRI-JP 0.62 0.64 0 NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 15 55184855 55203398 1 1 188 0 0 0 1 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 5.63 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 16 NA NA 0 0 188 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 17 NA NA 0 0 188 0 0 0 0 0 NA 0.5 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.74 0 NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 18 38127241 38156125 1 1 188 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 5.63 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 19 58086219 58100980 1 1 188 0 0 0 1 0 0.39 1 1 0 NA NA NA NA NA NA NA 5.63 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 20 NA NA 0 0 188 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 21 NA NA 0 0 188 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 22 NA NA 0 0 188 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK153 X NA NA 0 0 188 0 0 0 0 0 NA 0.4 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 0 NA NA 0 No LIRI-JP RK153 LIRI 0.2 1.94 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23547 RK153 male alive C22 74 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK154 1 245197546 247553706 1 1 181 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 8 5 5 24.4 36.81 63.19 0 2 4 Whitelist LIRI-JP 0.62 0.13 0 NA 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 2 5683908 196843650 1 3 181 0 0 1 2 0 0.3 0.89 1 0 0 NA NA NA NA NA NA 24.4 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 3 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 4 107793709 107805914 1 1 181 0 0 1 0 0 0.39 0.03 1 0 NA NA NA NA NA NA NA 24.4 22.61 77.37 0 2 NA Whitelist LIRI-JP 0.62 0.1 0 NA 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 5 42611436 68166193 1 2 181 1 0 1 0 0 0.57 0.76 1 0 0 NA NA NA NA NA NA 24.4 0 99.88 0 2 NA Whitelist LIRI-JP 0.68 0.92 0 0 0.64 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 6 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 7 96871712 125933778 1 2 181 0 0 1 1 0 0.57 0.41 1 0 0 NA NA NA NA NA NA 24.4 97.35 0 0 3 NA Whitelist LIRI-JP 0.68 0.66 0 0 0.64 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 8 54201964 63151362 1 2 181 0 0 1 1 0 0.57 0.12 1 0 0 NA NA NA NA NA NA 24.4 99.98 0 0 5 NA Whitelist LIRI-JP 0.68 0.31 0 0 0.64 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 9 NA NA 0 0 181 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.17 NA NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 10 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 11 NA NA 0 0 181 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.99 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 12 15451105 89089518 1 2 181 0 0 2 0 0 0.11 0.22 3 0 0 NA NA NA NA NA NA 24.4 0.17 96.09 0 2 4 Whitelist LIRI-JP 0.54 0.44 0 0 0.48 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 13 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 14 43241418 43266371 1 1 181 0 0 0 1 0 0.39 0.83 1 0 NA NA NA NA NA NA NA 24.4 0 96.29 0 2 NA Whitelist LIRI-JP 0.62 0.97 0 NA 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 15 94932952 94964237 1 1 181 0 0 1 0 0 0.39 0.36 2 0 0 NA NA NA NA NA NA 24.4 0.03 99.85 0 1 2 Whitelist LIRI-JP 0.62 0.61 0 0 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 16 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 17 NA NA 0 0 181 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.49 NA NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 18 69515721 69527524 1 1 181 0 0 1 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 24.4 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.49 NA NA 0.59 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 19 NA NA 0 0 181 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 20 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 21 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 22 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK154 X 43607874 48932582 1 2 181 1 1 0 0 0 0.57 0.86 1 0 0 NA NA NA NA NA NA 24.4 99.79 0 0 1 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK154 LIRI 0.41 2.17 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48694 RK154 male alive C22 71 840 NA NA Included Liver-HCC LIRI JP 1 27.63 LIRI-JP::RK156 1 62043378 224605839 1 8 38 3 0 1 1 3 0.28 0.01 7 0 0 7 4 4 8 4 4 40.08 27.88 72.12 0 2 4 Whitelist LIRI-JP 0.54 0.04 0 0 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 13 0.17 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 2 NA NA 0 0 38 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 3 NA NA 0 0 38 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 4 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 5 18857697 170518635 1 2 38 0 2 0 0 0 0.11 1 2 NA 0.02 NA NA NA NA NA NA 40.08 0.11 99.74 0 2 3 Whitelist LIRI-JP 0.54 1 NA 0.02 0.48 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 6 87921681 87947779 1 1 38 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 40.08 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 7 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 8 19705586 24132112 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 40.08 65.39 34.61 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 9 112544854 117137516 1 1 38 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 40.08 96.07 3.25 0 2 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 10 60499222 63274120 1 3 38 0 1 1 1 0 0.8 0.25 4 0 0 4 0 3 4 0 3 40.08 2.05 97.84 0 2 3 Whitelist LIRI-JP 0.87 0.49 0 0 0.84 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 11 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 12 5910015 9349511 1 3 38 0 1 0 0 2 0.39 0.1 2 NA 0 NA NA NA NA NA NA 40.08 2.57 97.35 0 2 4 Whitelist LIRI-JP 0.62 0.27 NA 0 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 13 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 15 55387395 55501989 1 1 38 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 40.08 84.46 0 0 1 NA Whitelist LIRI-JP 0.62 0.53 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 16 47918036 56782451 1 2 38 0 2 0 0 0 0.11 0.27 3 NA 0 NA NA NA NA NA NA 40.08 99.99 0 0 1 3 Whitelist LIRI-JP 0.54 0.51 NA 0 0.48 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 17 4890053 59987200 1 3 38 1 1 0 0 1 0.57 0 6 0 0 6 0 4 9 3 5 40.08 20.66 79.34 0 2 0 Whitelist LIRI-JP 0.87 0 0 0 0.64 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 5 0.07 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 18 NA NA 0 0 38 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 19 NA NA 0 0 38 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 20 17773990 18061887 1 1 38 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 40.08 0.46 98.54 0 2 4 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 0 0 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 22 17298303 17316467 1 1 38 0 0 0 1 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 40.08 76.22 0 0 1 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK156 X 19658991 19868329 1 1 38 0 0 0 1 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 40.08 99.83 0.17 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK156 LIRI 0.34 1.75 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO23549 RK156 male alive C22 74 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK157 1 27066689 247824999 1 4 52 1 1 1 0 1 0.8 0.13 9 0 0 9 3 6 10 3 3 83.44 79.94 16.94 0 6 8 Whitelist LIRI-JP 1 0.31 0 0 0.84 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 7 0.07 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 2 126581921 139277539 1 2 52 1 1 0 0 0 0.57 0.62 3 0 0 NA NA NA NA NA NA 83.44 99.76 0.13 0 3 2 Whitelist LIRI-JP 0.68 0.84 0 0 0.64 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 4 0.04 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 3 172130261 196814310 1 2 52 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 83.44 99.86 0 0 4 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 4 0.04 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 4 38406858 39239148 2 3 52 1 0 0 1 1 0.57 0 3 0 0 NA NA NA 18 3 3 83.44 97.4 0 0 3 9 Whitelist LIRI-JP 0.62 0.01 0 0 0.64 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 5 0.05 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 5 40774728 59584296 1 2 52 1 1 0 0 0 0.57 1 5 0 0 5 3 5 6 3 3 83.44 97.31 0 0 4 5 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 4 0.04 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 6 10097740 106746457 1 5 52 2 1 0 0 2 0.3 0.24 9 0.73 0 9 3 5 12 3 3 83.44 41.18 55.99 0 5 2 Whitelist LIRI-JP 0.68 0.48 0.73 0 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 8 0.08 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 8 48475702 69748834 1 2 52 1 1 0 0 0 0.57 0.34 5 0 0 5 3 4 6 3 4 83.44 67.14 29.44 0 7 4 Whitelist LIRI-JP 0.68 0.59 0 0 0.64 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 4 0.04 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 9 104081381 104368631 1 1 52 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA 4 4 4 83.44 96.93 0 0 4 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 10 77122827 77385463 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 4 83.44 96.52 0.06 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 11 103009109 103051372 1 1 52 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 83.44 99.57 0 0 4 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 12 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 13 23731144 81841625 1 2 52 1 0 0 0 1 0.39 0.43 3 NA 0 NA NA NA 5 0 0 83.44 77.37 19.85 0 1 2 Whitelist LIRI-JP 0.68 0.68 NA 0 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 3 0.03 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 14 NA NA 0 0 52 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 15 86373235 86400624 1 1 52 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA 4 0 3 83.44 82.82 12.4 0 4 NA Whitelist LIRI-JP 0.62 0.86 NA NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 17 2092233 2137197 1 1 52 0 1 0 0 0 0.39 0.17 1 0 NA NA NA NA NA NA NA 83.44 76.28 19.28 0 4 NA Whitelist LIRI-JP 0.62 0.38 0 NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 19 1357795 1438363 1 1 52 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 4 83.44 92.11 7.17 0 2 5 Whitelist LIRI-JP 0.62 0.52 NA NA 0.59 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 20 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK157 X NA NA 0 0 52 0 0 0 0 0 NA 0.75 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 0 NA NA 0 No LIRI-JP RK157 LIRI 0.57 3.63 Liver-HCC NA 0 0 NA 3 LIRI-JP DO45257 RK157 male alive C22 46 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK159 1 39435662 39673744 1 1 24 0 1 0 0 0 0.39 0.71 2 NA NA NA NA NA 6 3 4 86.15 87.44 12.55 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 2 0.04 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 2 239920308 240628492 1 2 24 1 0 0 0 1 0.39 0.01 2 0 0 NA NA NA 8 7 8 86.15 99.89 0 0 1 3 Whitelist LIRI-JP 0.68 0.06 0 0 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 3 0.06 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 4 NA NA 0 0 24 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.21 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 6 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 8 NA NA 0 0 24 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.6 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 11 2902505 14604387 1 2 24 2 0 0 0 0 0.11 0.1 4 NA 0 4 4 4 11 5 11 86.15 52.56 47.02 0 2 4 Whitelist LIRI-JP 0.54 0.26 NA 0 0.48 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 4 0.08 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 13 NA NA 0 0 24 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 14 NA NA 0 0 24 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 16 NA NA 0 0 24 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.72 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 17 41447791 41663848 1 1 24 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 86.15 99.94 0 0 4 6 Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 2 0.04 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 18 37372958 37403292 1 1 24 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 6 3 3 86.15 76.25 19.09 0 4 6 Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 2 0.04 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 19 9125779 33770210 1 3 24 1 2 0 0 0 0.3 0 6 0 0 6 6 6 7 7 7 86.15 99.83 0 0 4 6 Whitelist LIRI-JP 0.62 0.01 0 0 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 6 0.12 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 20 49257221 49385595 1 1 24 0 0 0 1 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 86.15 99.71 0 0 6 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 2 0.04 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK159 X NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK159 LIRI 0.84 3.47 Biliary-AdenoCA NA 0 0 NA 4 LIRI-JP DO45259 RK159 male alive C22 65 330 NA NA Included Biliary-AdenoCA LIRI JP 1 10.86 LIRI-JP::RK162 1 156109478 206866161 1 2 33 0 2 0 0 0 0.11 0.33 2 0 0 NA NA NA 6 3 4 75.93 96.63 0 0 5 6 Whitelist LIRI-JP 0.54 0.58 0 0 0.48 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 2 11581363 166554324 1 4 33 1 1 0 0 2 0.57 0.35 6 0.01 0 6 5 6 7 5 7 75.93 33.8 63.52 0 2 4 Whitelist LIRI-JP 0.62 0.61 0.01 0 0.64 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 3 39783493 170739435 1 2 33 0 2 0 0 0 0.11 1 5 NA 0 5 3 4 6 3 3 75.93 96.84 0 0 3 5 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 5 133729453 133818382 1 1 33 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA 9 3 5 75.93 97.33 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 7 47623710 134843305 1 4 33 0 2 0 0 2 0.11 0.03 6 0 0 6 3 3 8 3 3 75.93 83.18 14.1 0 4 5 Whitelist LIRI-JP 0.68 0.11 0 0 0.48 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 8 87264517 131295836 1 3 33 1 2 0 0 0 0.3 0.02 5 0 0 5 3 4 8 3 4 75.93 99.89 0 0 4 5 Whitelist LIRI-JP 0.62 0.1 0 0 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 10 89313199 89485344 1 1 33 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 7 4 4 75.93 77.78 18.89 0 3 7 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 11 118281917 118328650 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 75.93 87.49 12.35 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 12 NA NA 0 0 33 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.2 NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 13 44658770 44798134 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 3 75.93 83.07 14.15 0 4 6 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 14 53068724 73828961 1 2 33 0 2 0 0 0 0.11 0.08 4 NA 0 4 0 4 6 0 5 75.93 95.1 1.19 0 3 4 Whitelist LIRI-JP 0.54 0.24 NA 0 0.48 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 15 36124831 36144036 1 1 33 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA 4 3 4 75.93 0.02 95.04 0 2 3 Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 17 NA NA 0 0 33 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 18 NA NA 0 0 33 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 19 15199035 49311769 1 3 33 0 3 0 0 0 0.03 0.03 2 0 0 NA NA NA NA NA NA 75.93 92.72 0 0 1 3 Whitelist LIRI-JP 0.41 0.1 0 0 0.33 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 22 NA NA 0 0 33 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK162 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK162 LIRI 0.71 3.31 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48695 RK162 male alive C22 77 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK163 1 167685687 227802841 2 4 38 0 0 2 2 0 0.26 0.01 11 0 0 11 5 8 18 7 10 27.35 44.38 52.6 0 2 4 Whitelist LIRI-JP 0.62 0.04 0 0 0.59 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 8 0.11 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 2 NA NA 0 0 38 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 3 NA NA 0 0 38 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 4 55287724 78645421 11 11 38 2 4 3 2 0 0.8 0 9 0 0 9 9 9 10 10 10 27.35 70.5 29.48 0 1 2 Whitelist LIRI-JP 0.87 0 0 0 0.84 1 High confidence LIRI-JP RK163 LIRI 0.48 2 Liver-HCC Canonical without polyploidization 22 0.29 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 5 NA NA 0 0 38 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 6 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 7 NA NA 0 0 38 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 8 12591771 42766455 1 1 38 0 0 0 1 0 0.39 0.72 3 NA 0 NA NA NA 5 4 4 27.35 96.24 0 0 3 1 Whitelist LIRI-JP 0.62 0.9 NA 0 0.59 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 9 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 10 83800539 125573734 1 2 38 2 0 0 0 0 0.11 0.69 1 NA 0 NA NA NA NA NA NA 27.35 61.76 38.09 0 2 NA Whitelist LIRI-JP 0.54 0.89 NA 0 0.48 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 11 NA NA 0 0 38 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 12 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 13 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 16 351041 79227364 1 3 38 2 0 1 0 0 0.3 0.02 7 0 0 7 3 5 8 4 4 27.35 36.79 63.11 0 2 1 Whitelist LIRI-JP 0.62 0.08 0 0 0.59 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 17 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 18 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 19 NA NA 0 0 38 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.39 NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 20 1592048 1895891 1 1 38 0 0 0 1 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 27.35 98.92 0 0 3 NA Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK163 X 9579111 9651412 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.35 0.05 99.72 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK163 LIRI 0.48 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48697 RK163 female deceased C22 64 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK164 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 3 136338554 136427479 1 1 11 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 12.37 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 2 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 6 55946594 97170388 1 1 11 0 0 1 0 0 0.39 0.49 2 NA NA NA NA NA 4 3 3 12.37 75.56 24.17 0 1 2 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 2 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 10 114284141 116682561 1 4 11 1 1 0 0 2 0.57 0 3 0 0 NA NA NA NA NA NA 12.37 0.21 99.61 0 2 1 Whitelist LIRI-JP 1 0.01 0 0 0.64 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 6 0.27 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 15 NA NA 0 0 11 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 16 24112643 24196197 1 1 11 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 12.37 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 2 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 18 44060383 44104479 1 1 11 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 12.37 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 2 0.09 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 19 20816892 21481360 2 2 11 0 1 1 0 0 0.57 0 3 0 0 NA NA NA 8 5 5 12.37 87.72 5 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 4 0.18 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK164 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK164 LIRI 0.64 1.93 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 LIRI-JP DO23550 RK164 male alive C22 69 990 NA NA Included Liver-HCC LIRI JP 1 32.57 LIRI-JP::RK166 1 94628737 241577638 1 13 74 4 5 2 0 2 0.15 0 25 0 0 25 10 10 25 10 10 35.23 18.71 81.29 0 3 2 Whitelist LIRI-JP 0.68 0 0 0 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 24 0.16 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 2 33795480 238662454 1 5 74 1 1 0 1 2 0.8 0.67 7 0 0 7 6 7 10 7 7 35.23 7.07 92.83 0 2 3 Whitelist LIRI-JP 0.93 0.88 0 0 0.84 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 8 0.05 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 3 29378251 29391208 1 1 74 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 35.23 43.86 52.49 0 1 NA Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 4 63820265 72135670 1 2 74 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 35.23 62.05 37.72 0 2 3 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 5 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 6 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 7 NA NA 0 0 74 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 8 57869397 58215335 1 1 74 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 7 3 3 35.23 38.48 61.52 0 1 2 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 9 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 10 NA NA 0 0 74 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 11 61698732 117755770 1 4 74 0 2 1 0 1 0.3 0.78 6 0 0 6 6 6 7 7 7 35.23 98.62 0.96 0 1 2 Whitelist LIRI-JP 0.68 0.93 0 0 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 7 0.05 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 12 60082648 81121169 2 2 74 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA 11 5 5 35.23 23.94 75.98 0 2 NA Whitelist LIRI-JP 0.68 0.09 0 0 0.64 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 13 96936658 104475344 15 17 74 4 1 3 7 2 0.17 0 18 0 0 18 5 7 24 5 7 35.23 99.98 0.02 0 3 15 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 Low confidence LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC With other complex events 32 0.22 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 14 75649889 95330343 1 2 74 1 1 0 0 0 0.57 0.51 4 NA 0 4 3 4 5 3 3 35.23 2.28 96.81 0 2 1 Whitelist LIRI-JP 0.68 0.75 NA 0 0.64 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 15 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 16 7848343 8245643 1 1 74 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 35.23 57.72 36.94 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 17 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 18 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 19 58652099 58778421 1 1 74 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 35.23 0.21 99.02 0 3 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 20 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 21 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 22 17663373 35995743 2 6 74 1 1 2 2 0 0.88 0 6 0 0 6 3 5 8 3 3 35.23 75.89 13 0 2 3 Whitelist LIRI-JP 0.93 0 0 0 0.91 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 12 0.08 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK166 X NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK166 LIRI 0.48 1.74 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45263 RK166 male deceased C22 67 270 NA NA Included Liver-HCC LIRI JP 1 8.88 LIRI-JP::RK167 1 1562933 71739261 16 16 81 2 6 5 3 0 0.48 0 14 0 0 14 8 14 21 8 14 78.78 81.76 14.97 0 4 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 High confidence LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC With other complex events 32 0.2 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 2 84572525 141743899 1 2 81 1 0 0 1 0 0.57 0.32 3 0 0 NA NA NA NA NA NA 78.78 99.84 0.14 0 4 2 Whitelist LIRI-JP 0.68 0.57 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 3 NA NA 0 0 81 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.15 NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 4 12505201 57550592 1 6 81 1 0 1 2 2 0.57 0.12 3 0 0 NA NA NA 6 0 0 78.78 30.29 69.7 0 6 8 Whitelist LIRI-JP 0.62 0.3 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 10 0.06 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 5 43921224 104442521 1 2 81 1 0 1 0 0 0.57 0.49 3 0 0 NA NA NA NA NA NA 78.78 99.73 0.14 0 4 2 Whitelist LIRI-JP 0.68 0.73 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 6 145831848 169439545 1 2 81 0 1 1 0 0 0.57 0.24 1 NA 0 NA NA NA NA NA NA 78.78 99.98 0 0 3 NA Whitelist LIRI-JP 0.68 0.48 NA 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 7 10390696 92715412 1 2 81 1 0 0 1 0 0.57 0.8 3 0.01 0 NA NA NA 4 3 3 78.78 99.75 0.02 0 4 2 Whitelist LIRI-JP 0.68 0.95 0.01 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 8 25135543 79096515 1 5 81 1 1 3 0 0 0.28 0.07 4 0 0 4 0 3 6 3 3 78.78 70.39 26.19 0 6 2 Whitelist LIRI-JP 0.62 0.2 0 0 0.59 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 10 0.06 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 9 31443478 91756101 1 2 81 0 0 1 1 0 0.57 1 2 0 0 NA NA NA NA NA NA 78.78 77.1 22.23 0 4 6 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 10 92308456 109532207 1 2 81 0 0 2 0 0 0.11 0.59 1 NA 0 NA NA NA NA NA NA 78.78 99.8 0 0 3 NA Whitelist LIRI-JP 0.54 0.81 NA 0 0.48 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 11 24665455 81443754 1 5 81 1 0 2 1 1 0.57 0.28 3 0 0 NA NA NA 5 4 4 78.78 99.6 0 0 3 4 Whitelist LIRI-JP 0.68 0.52 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 9 0.06 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 12 59667104 73247648 1 2 81 0 0 2 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 78.78 99.98 0 0 4 NA Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 13 68730975 104459981 1 3 81 1 0 0 2 0 0.3 0.76 3 0 0 NA NA NA NA NA NA 78.78 100 0 0 4 3 Whitelist LIRI-JP 0.62 0.92 0 0 0.59 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 6 0.04 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 14 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 15 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 16 10994083 13214326 1 1 81 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 6 4 4 78.78 35.23 64.67 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 17 NA NA 0 0 81 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 18 NA NA 0 0 81 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 19 14506870 42120634 1 4 81 2 0 1 1 0 0.57 0.08 6 0 0 6 3 6 7 3 6 78.78 68.66 23.85 0 5 6 Whitelist LIRI-JP 0.68 0.22 0 0 0.64 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 8 0.05 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 20 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 21 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 22 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK167 X 93871320 93890081 1 1 81 0 0 1 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 78.78 0.01 99.79 0 2 NA Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK167 LIRI 0.54 3.68 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 4 LIRI-JP DO45265 RK167 male alive C22 73 1020 NA NA Included Liver-HCC LIRI JP 1 33.55 LIRI-JP::RK169 1 15972175 155201918 1 3 75 1 1 0 0 1 0.57 0.28 7 NA 0 7 3 3 9 4 4 75.95 80.48 16.48 0 3 2 Whitelist LIRI-JP 0.62 0.53 NA 0 0.64 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 5 0.03 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 2 168383297 183345944 1 2 75 2 0 0 0 0 0.11 0.21 4 0 0 4 3 4 8 3 3 75.95 97.31 0 0 4 1 Whitelist LIRI-JP 0.54 0.44 0 0 0.48 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 4 0.03 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 3 60001140 153823245 1 2 75 2 0 0 0 0 0.11 0.82 4 0 0 4 4 4 11 5 5 75.95 99.99 0 0 3 4 Whitelist LIRI-JP 0.54 0.96 0 0 0.48 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 4 0.03 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 4 39605217 175415248 1 10 75 2 1 1 1 5 0.9 0 11 0 0 11 4 9 14 4 4 75.95 52.43 44.99 0 3 2 Whitelist LIRI-JP 14 0.86 0 0 0 0.92 1 Linked to low confidence LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC With other complex events 15 0.1 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 5 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 6 67707659 110782332 12 12 75 4 4 2 2 0 0.72 0 24 0 0 24 8 13 25 8 13 75.95 99.64 0.12 0 3 1 Whitelist LIRI-JP 0.83 0 0 0 0.8 1 High confidence LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC With other complex events 24 0.16 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 7 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 8 42208678 43785179 1 1 75 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 0 0 75.95 68.11 28.46 0 6 8 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 9 37942207 137197150 1 4 75 3 1 0 0 0 0.11 0.54 8 0 0 8 6 8 11 7 9 75.95 85.4 14.49 0 4 2 Whitelist LIRI-JP 0.54 0.77 0 0 0.48 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 8 0.05 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 10 621136 97389152 2 2 75 1 0 0 1 0 0.57 0.78 11 0.01 0.08 11 3 3 12 3 3 75.95 98.07 1.72 0 3 4 Whitelist LIRI-JP 0.68 0.93 0.01 0.08 0.64 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 4 0.03 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 11 84288074 84305459 1 1 75 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 75.95 99.57 0 0 3 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 12 NA NA 0 0 75 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 13 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 14 73252280 85449372 9 15 75 1 4 2 2 6 0.55 0 22 0 0 22 6 6 23 6 6 75.95 81.59 2.5 3 4 5 Whitelist LIRI-JP 0.73 0 0 0 0.64 1 Low confidence LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC With other complex events 24 0.16 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 15 40088645 40121124 1 1 75 0 0 0 1 0 0.39 0.47 2 NA NA NA NA NA 5 0 3 75.95 84.46 0 0 5 6 Whitelist LIRI-JP 0.62 0.71 NA NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 16 5999570 78119062 1 4 75 1 0 2 1 0 0.57 0.14 5 0 0 5 3 5 5 3 5 75.95 51.94 43.59 0 1 2 Whitelist LIRI-JP 0.68 0.34 0 0 0.64 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 8 0.05 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 17 40099560 56806339 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 4 4 75.95 74.13 21.4 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 18 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 19 54590828 54642334 1 1 75 1 0 0 0 0 0.39 0.18 2 0 NA NA NA NA 6 3 3 75.95 92.72 0 0 1 4 Whitelist LIRI-JP 0.62 0.4 0 NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 20 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 21 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 22 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK169 X 104738710 104784838 1 1 75 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 75.95 0.03 99.97 0 1 2 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 1 No LIRI-JP RK169 LIRI 0.24 3.37 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:1 4 LIRI-JP DO23551 RK169 male deceased C22 73 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK170 1 53384423 53411032 1 1 87 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 28.09 42.43 57.57 0 2 NA Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 2 186955197 186995406 1 1 87 0 1 0 0 0 0.39 0.85 1 0 NA NA NA NA NA NA NA 28.09 0 99.91 0 2 NA Whitelist LIRI-JP 0.62 0.98 0 NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 3 61128939 183158189 1 4 87 4 0 0 0 0 0.01 1 2 0 0 NA NA NA NA NA NA 28.09 0.02 99.86 0 1 2 Whitelist LIRI-JP 0.21 1 0 0 0.16 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 8 0.05 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 4 199070 89711867 1 2 87 0 2 0 0 0 0.11 0.66 4 0 0 4 4 4 5 5 5 28.09 0.4 99.37 0 2 3 Whitelist LIRI-JP 0.54 0.87 0 0 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 4 0.02 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 5 89384546 139362509 1 3 87 2 1 0 0 0 0.3 1 4 0 0 4 3 4 5 3 3 28.09 25.43 74.45 0 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 6 0.03 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 6 32986111 162321912 1 10 87 2 4 0 0 4 0.06 0.01 10 0 0 10 5 7 11 5 7 28.09 91.19 5.8 0 3 2 Whitelist LIRI-JP 8 0.62 0.03 0 0 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 16 0.09 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 7 88845356 89452681 2 2 87 0 0 1 1 0 0.57 0.14 5 0 0 5 3 5 9 6 6 28.09 19.07 80.7 0 3 2 Whitelist LIRI-JP 0.68 0.34 0 0 0.64 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 4 0.02 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 8 91268637 132285050 3 3 87 1 1 0 1 0 0.8 0.01 11 0 0 11 6 11 14 6 6 28.09 96.58 0 0 5 6 Whitelist LIRI-JP 0.87 0.06 0 0 0.84 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 6 0.03 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 9 NA NA 0 0 87 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 0 0 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 10 4973370 105736369 1 2 87 0 2 0 0 0 0.11 0.8 2 0.05 0.01 NA NA NA NA NA NA 28.09 0.16 99.65 0 2 3 Whitelist LIRI-JP 0.54 0.95 0.05 0.01 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 4 0.02 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 11 62612660 130106791 1 3 87 0 2 0 0 1 0.11 0.8 5 NA 0 5 3 5 5 3 5 28.09 1.78 97.79 0 2 3 Whitelist LIRI-JP 0.62 0.95 NA 0 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 5 0.03 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 12 104643564 104696090 1 1 87 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 28.09 15.7 84.22 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 13 74318243 74693444 1 1 87 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 4 28.09 59.61 37.61 0 1 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 14 34202495 34563826 3 3 87 0 1 1 1 0 0.8 0.02 2 0 0 NA NA NA 8 0 4 28.09 29.68 66.61 0 4 6 Whitelist LIRI-JP 0.87 0.08 0 0 0.84 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 6 0.03 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 15 102046988 102148318 1 1 87 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 4 4 28.09 1.98 97.65 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 16 1158712 79079806 1 3 87 1 2 0 0 0 0.3 0.51 4 0 0 4 3 4 5 3 3 28.09 0.63 99.27 0 2 1 Whitelist LIRI-JP 0.62 0.75 0 0 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 6 0.03 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 17 37021440 56218300 1 2 87 0 2 0 0 0 0.11 0.51 5 NA 0 5 3 5 8 6 6 28.09 48.78 51.2 0 2 1 Whitelist LIRI-JP 0.54 0.75 NA 0 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 4 0.02 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 18 20478351 22273875 1 1 87 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 28.09 97.69 2.3 0 1 2 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 19 3001307 36561228 1 4 87 0 3 1 0 0 0.11 0 11 0 0 11 4 6 11 4 6 28.09 59.53 40.3 0 3 1 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 8 0.05 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 20 51744056 53094704 1 1 87 0 1 0 0 0 0.39 0.44 2 0 NA NA NA NA 5 3 3 28.09 2.16 96.88 0 2 3 Whitelist LIRI-JP 0.62 0.69 0 NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 21 NA NA 0 0 87 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 0 0 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 22 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 0 0 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK170 X 451867 1941103 1 1 87 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 28.09 48.07 51.63 0 1 NA Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK170 LIRI 0.65 2.11 Liver-HCC NA 2 0.01 stopgain,17_7578493_T_C,CN:1 2 LIRI-JP DO45267 RK170 male deceased C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK171 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 2 141839326 141864542 1 1 11 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.24 0.01 99.88 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 5 122251291 122293810 1 1 11 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA 4 4 4 19.24 99.38 0.49 0 2 3 Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 7 NA NA 0 0 11 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.7 NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 8 33403096 52649600 6 6 11 1 1 2 2 0 0.88 0 8 0 0 8 5 6 12 5 5 19.24 96.58 0 13 1 3 Whitelist LIRI-JP 0.93 0 0 0 0.91 0 Low confidence LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC Canonical without polyploidization 12 0.55 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 10 NA NA 0 0 11 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK171 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK171 LIRI 0.39 2.23 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48700 RK171 female alive C22 78 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 1 22025075 101694792 1 8 168 0 5 0 0 3 0 0.47 9 0 0 9 7 9 12 9 9 42.58 12.89 87.1 0 2 3 Whitelist LIRI-JP 0.28 0.72 0 0 0.07 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 13 0.04 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 2 NA NA 0 0 168 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 3 168841106 177141954 6 6 168 1 3 1 1 0 0.57 0.36 8 0 0 8 7 8 21 7 7 42.58 49.84 50.13 0 2 3 Whitelist LIRI-JP 0.68 0.62 0 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 12 0.04 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 4 88175001 88509128 1 1 168 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 42.58 97.44 0.17 0 1 2 Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 5 62205924 130667689 54 55 168 13 18 12 11 1 0.54 0 64 0 0 64 25 43 69 25 25 42.58 37 60.31 2 2 1 Whitelist LIRI-JP 0.69 0 0 0 0.64 1 High confidence LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC With other complex events 109 0.32 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 6 18208960 18319729 1 1 168 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 4 5 42.58 62.32 37.54 0 2 3 Whitelist LIRI-JP 0.62 0.03 NA NA 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 7 40166988 158975898 1 2 168 0 1 0 1 0 0.57 0.23 4 0 0 4 4 4 4 4 4 42.58 25.83 74.14 0 1 2 Whitelist LIRI-JP 0.68 0.46 0 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 8 9405271 29852834 3 3 168 0 0 1 2 0 0.3 0.38 5 0 0 5 5 5 14 12 12 42.58 15.58 84.07 0 2 1 Whitelist LIRI-JP 0.62 0.63 0 0 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 9 NA NA 0 0 168 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 NA NA NA 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 10 52858783 84069397 1 2 168 1 1 0 0 0 0.57 0.09 2 NA 0 NA NA NA NA NA NA 42.58 99.76 0.06 0 1 2 Whitelist LIRI-JP 0.68 0.26 NA 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 11 34410012 107694292 1 3 168 0 2 0 0 1 0.11 0.2 5 0 0 5 0 4 6 3 4 42.58 0.53 99.04 0 2 3 Whitelist LIRI-JP 0.41 0.42 0 0 0.48 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 5 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 12 64082828 67780885 4 4 168 2 2 0 0 0 0.26 0.59 5 0 0 5 5 5 11 10 10 42.58 71.6 28.39 0 3 2 Whitelist LIRI-JP 0.62 0.81 0 0 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 8 0.02 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 13 37483716 37549929 1 1 168 0 1 0 0 0 0.39 0.39 1 NA 0 NA NA NA NA NA NA 42.58 80.58 19.42 0 1 NA Whitelist LIRI-JP 0.62 0.64 NA 0 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 14 33329540 34787247 2 2 168 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA 4 3 4 42.58 96.27 0.02 0 3 NA Whitelist LIRI-JP 0.68 0.4 NA 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 15 NA NA 0 0 168 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.85 NA NA NA 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 16 130560 18617717 1 2 168 1 1 0 0 0 0.57 0.34 1 NA 0.04 NA NA NA NA NA NA 42.58 99.86 0 1 1 NA Whitelist LIRI-JP 0.68 0.59 NA 0.04 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 17 21778701 54826196 1 2 168 0 2 0 0 0 0.11 0.34 3 NA 0 NA NA NA 4 3 3 42.58 11.8 88.13 0 2 3 Whitelist LIRI-JP 0.54 0.59 NA 0 0.48 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 18 49290998 62052326 29 29 168 4 8 9 8 0 0.57 0 1 0 0 NA NA NA NA NA NA 42.58 2.51 97.45 0 2 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 58 0.17 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 19 NA NA 0 0 168 0 0 0 0 0 NA 0.39 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 0 NA NA 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 20 1176013 32126373 1 5 168 1 1 0 0 3 0.57 0.18 5 0.06 0 5 3 4 8 4 5 42.58 86.03 12.97 0 1 2 Whitelist LIRI-JP 0.68 0.4 0.06 0 0.64 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 7 0.02 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 21 23409601 23429095 1 1 168 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 42.58 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 22 NA NA 0 0 168 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK172 X 11294038 148762794 1 5 168 0 3 2 0 0 0.14 0.48 4 0 0 4 4 4 5 5 5 42.58 7.86 91.91 1 1 2 Whitelist LIRI-JP 0.62 0.73 0 0 0.59 1 No LIRI-JP RK172 LIRI 0.86 1.72 Liver-HCC NA 10 0.03 nonsynonymous_SNV,17_7578281_A_G,CN:1 3 LIRI-JP DO23552 RK172 female alive C22 80 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK175 1 85475553 85519491 2 2 103 2 0 0 0 0 0.11 0.09 3 0 0 NA NA NA 4 3 3 29.33 42.58 57.41 0 2 1 Whitelist LIRI-JP 0.54 0.26 0 0 0.48 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 2 157068685 196843648 1 2 103 0 0 1 1 0 0.57 0.72 1 0 0 NA NA NA NA NA NA 29.33 0 99.9 0 2 NA Whitelist LIRI-JP 0.68 0.9 0 0 0.64 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 3 3439241 164231510 1 3 103 1 0 0 2 0 0.3 0.7 1 0 0 NA NA NA NA NA NA 29.33 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.89 0 0 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 4 18768003 96761506 1 4 103 0 0 2 2 0 0.26 0.43 5 0 0 5 5 5 6 6 6 29.33 68.24 29.38 0 2 1 Whitelist LIRI-JP 0.62 0.68 0 0 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 5 40523130 40535597 1 1 103 0 0 0 1 0 0.39 0.54 1 0 NA NA NA NA NA NA NA 29.33 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.77 0 NA 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 6 69428251 142386882 1 3 103 1 1 0 1 0 0.8 0.53 5 0 0 5 3 5 6 4 4 29.33 66.2 33.67 0 1 0 Whitelist LIRI-JP 0.87 0.76 0 0 0.84 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 7 143814623 143827830 1 1 103 0 0 0 1 0 0.39 0.38 1 0.01 NA NA NA NA NA NA NA 29.33 99.78 0 0 3 NA Whitelist LIRI-JP 0.62 0.63 0.01 NA 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 8 106212591 115924753 1 2 103 0 0 1 1 0 0.57 0.37 1 0 0 NA NA NA NA NA NA 29.33 29.44 67.14 0 2 NA Whitelist LIRI-JP 0.68 0.62 0 0 0.64 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 9 29658336 32095258 3 3 103 1 1 0 1 0 0.8 0 5 0 0 5 4 5 19 7 7 29.33 10.87 88.99 0 2 4 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 10 89643406 89659665 1 1 103 1 0 0 0 0 0.39 0.81 1 0 NA NA NA NA 4 4 4 29.33 62.85 36.97 0 1 NA Whitelist LIRI-JP 0.62 0.96 0 NA 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 11 NA NA 0 0 103 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 12 28797138 28823391 1 1 103 0 0 0 1 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 29.33 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.48 NA NA 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 13 35931355 63578056 1 2 103 1 0 0 1 0 0.57 0.41 1 0 0 NA NA NA NA NA NA 29.33 0 100 0 2 NA Whitelist LIRI-JP 0.68 0.66 0 0 0.64 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 14 NA NA 0 0 103 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 15 NA NA 0 0 103 0 0 0 0 0 NA 0.76 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 0 NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 16 NA NA 0 0 103 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 17 NA NA 0 0 103 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 18 NA NA 0 0 103 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 19 NA NA 0 0 103 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 20 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 21 NA NA 0 0 103 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.61 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 22 NA NA 0 0 103 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK175 X 127656863 127679657 1 1 103 0 0 1 0 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 29.33 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 0 No LIRI-JP RK175 LIRI 0.65 1.91 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48701 RK175 male alive C22 78 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK176 1 69732359 88293578 1 5 94 1 0 0 1 3 0.57 0.85 2 0 0 NA NA NA NA NA NA 14.96 0.19 99.81 0 1 2 Whitelist LIRI-JP 0.68 0.98 0 0 0.64 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 7 0.04 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 2 203239032 204704622 3 3 94 0 1 1 1 0 0.8 0.26 3 0 0 NA NA NA 5 3 5 14.96 0.61 99.3 0 2 3 Whitelist LIRI-JP 0.87 0.5 0 0 0.84 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 3 57738686 140104075 1 5 94 2 1 0 0 2 0.3 0.69 3 0 0 NA NA NA 5 5 5 14.96 0.08 99.75 7 2 3 Whitelist LIRI-JP 5 0.68 0.89 0 0 0.59 1 Linked to low confidence LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC With other complex events 8 0.04 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 4 11496558 138658795 1 6 94 2 0 1 1 2 0.57 0.68 1 0 0 NA NA NA NA NA NA 14.96 0 99.8 0 2 NA Whitelist LIRI-JP 0.62 0.88 0 0 0.64 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 10 0.05 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 5 99356960 113044705 6 8 94 2 0 1 3 2 0.34 0.05 5 0 0 5 5 5 6 6 6 14.96 42.56 57.32 4 3 2 Whitelist LIRI-JP 0.87 0.16 0 0 0.59 1 Low confidence LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC Canonical without polyploidization 14 0.07 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 6 120471978 146600885 2 2 94 0 0 1 1 0 0.57 0.28 3 0 0 NA NA NA 5 5 5 14.96 0.09 99.66 0 2 1 Whitelist LIRI-JP 0.68 0.52 0 0 0.64 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 7 137649025 137864621 4 4 94 0 2 1 1 0 0.57 0 3 0 0 NA NA NA NA NA NA 14.96 0.13 99.64 0 2 4 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 8 36542144 56972621 19 31 94 7 5 5 2 12 0.44 0 17 0 0 17 8 9 19 8 10 14.96 99.99 0 1 1 4 Whitelist LIRI-JP 0.87 0 0 0 0.64 1 High confidence LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC With other complex events 50 0.27 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 9 NA NA 0 0 94 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 10 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 11 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 12 NA NA 0 0 94 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 13 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 14 37852063 38342367 1 1 94 0 0 0 1 0 0.39 1 3 NA NA NA NA NA 5 5 5 14.96 1.71 94.58 0 2 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 15 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 16 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 17 48842617 49099504 1 1 94 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 8 4 6 14.96 99.98 0 0 3 4 Whitelist LIRI-JP 0.62 0 0 NA 0.59 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 18 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 19 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 20 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 22 31555858 32209726 1 1 94 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.96 1.27 98.73 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK176 X NA NA 0 0 94 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 1 No LIRI-JP RK176 LIRI 0.62 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48703 RK176 male alive C22 64 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 1 72094871 155708765 1 3 139 2 0 0 0 1 0.11 0.03 1 0 0 NA NA NA NA NA NA 28.27 0 99.8 0 2 NA Whitelist LIRI-JP 0.62 0.1 0 0 0.48 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 5 0.02 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 2 141632439 142056845 4 4 139 3 1 0 0 0 0.11 1 3 0 0 NA NA NA 5 3 3 28.27 0.07 99.83 0 2 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 3 166344497 166434170 2 2 139 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 28.27 0 99.87 0 2 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 4 10854741 124156763 1 5 139 4 0 0 0 1 0.01 0.5 7 0 0 7 7 7 7 7 7 28.27 0.15 99.58 0 2 1 Whitelist LIRI-JP 0.45 0.74 0 0 0.16 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 9 0.03 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 5 146036574 158887878 5 5 139 2 2 1 0 0 0.53 0.6 9 0 0 9 6 9 14 8 8 28.27 29.41 67.92 0 1 2 Whitelist LIRI-JP 0.68 0.81 0 0 0.64 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 10 0.04 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 6 144614554 144762643 1 1 139 1 0 0 0 0 0.39 0.59 1 0 NA NA NA NA NA NA NA 28.27 0 99.73 0 2 NA Whitelist LIRI-JP 0.62 0.81 0 NA 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 7 127423162 127443022 1 1 139 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA 4 4 4 28.27 34.33 63.01 0 2 NA Whitelist LIRI-JP 0.62 0.04 NA NA 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 8 50712276 144686189 11 12 139 0 4 2 5 1 0.15 0 21 0 0 21 14 17 27 14 14 28.27 94.24 2.34 0 8 7 Whitelist LIRI-JP 0.54 0 0 0 0.59 0 Linked to high confidence LIRI-JP RK177 LIRI 0.72 2 Liver-HCC After polyploidization 23 0.08 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 False positive; manually removed LIRI-JP::RK177 9 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 10 57831685 98294404 3 3 139 0 1 2 0 0 0.3 1 1 0 0 NA NA NA NA NA NA 28.27 42.04 57.79 0 2 NA Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 11 12753144 70415439 1 3 139 1 1 0 0 1 0.57 0.22 5 NA 0 5 3 5 5 3 3 28.27 5.4 94.04 0 2 1 Whitelist LIRI-JP 0.62 0.46 NA 0 0.64 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 5 0.02 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 12 99268288 99434667 2 2 139 2 0 0 0 0 0.11 0.54 1 0 0 NA NA NA 6 5 5 28.27 24.96 71.29 0 2 NA Whitelist LIRI-JP 0.54 0.77 0 0 0.48 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 13 64138334 64706393 1 2 139 1 1 0 0 0 0.57 0.25 2 NA 0 NA NA NA NA NA NA 28.27 100 0 0 1 3 Whitelist LIRI-JP 0.68 0.49 NA 0 0.64 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 14 43606940 43630198 1 2 139 1 0 0 0 1 0.39 0.81 1 NA NA NA NA NA NA NA NA 28.27 0 99.09 0 2 NA Whitelist LIRI-JP 0.68 0.95 NA NA 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 3 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 15 39060279 62988829 1 3 139 3 0 0 0 0 0.03 1 1 0 0 NA NA NA NA NA NA 28.27 0 100 0 2 NA Whitelist LIRI-JP 0.41 1 0 0 0.33 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 16 2729647 80636590 9 16 139 2 3 2 2 7 0.95 0 22 0 0 22 8 9 22 8 8 28.27 68.35 31.58 0 2 3 Whitelist LIRI-JP 8 1 0 0 0 0.97 0 High confidence LIRI-JP RK177 LIRI 0.72 2 Liver-HCC With other complex events 25 0.09 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 17 29248404 36498759 2 4 139 0 0 2 2 0 0.26 0.79 5 0 0 5 5 5 8 8 8 28.27 42.45 53.09 0 1 2 Whitelist LIRI-JP 0.62 0.94 0 0 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 8 0.03 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 18 27535729 37903871 1 1 139 1 0 0 0 0 0.39 0.28 2 0 NA NA NA NA 10 6 6 28.27 27.49 67.86 0 2 3 Whitelist LIRI-JP 0.62 0.53 0 NA 0.59 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 19 19818376 19879618 2 2 139 0 1 0 1 0 0.57 0 3 0 0 NA NA NA 9 3 4 28.27 41.09 51.63 0 3 6 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 20 14792652 15057469 1 2 139 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 28.27 0 99.08 0 2 NA Whitelist LIRI-JP 0.54 0.93 NA 0 0.48 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 21 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 22 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK177 X 20199560 39938482 1 2 139 2 0 0 0 0 0.11 0.05 1 NA 0 NA NA NA NA NA NA 28.27 100 0 0 1 NA Whitelist LIRI-JP 0.54 0.16 NA 0 0.48 0 No LIRI-JP RK177 LIRI 0.72 2 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO45269 RK177 male alive C22 59 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 1 191304671 213916961 10 11 63 4 1 2 3 1 0.57 0 16 0 0 16 4 7 26 4 7 16.67 48.28 48.74 0 7 4 Whitelist LIRI-JP 0.74 0.02 0 0 0.64 1 Low confidence LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC With other complex events 21 0.17 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 2 76187553 76405423 1 1 63 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 4 4 4 16.67 4.36 95.53 0 1 2 Whitelist LIRI-JP 0.62 0.39 NA NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 3 19421810 175336973 1 3 63 2 0 0 0 1 0.11 0.63 2 NA 0.01 NA NA NA NA NA NA 16.67 29.04 70.84 0 2 3 Whitelist LIRI-JP 0.41 0.84 NA 0.01 0.48 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 4 40836696 121775962 1 4 63 2 0 0 0 2 0.11 0.2 6 0 0 6 3 6 7 3 3 16.67 0.46 99.31 0 2 1 Whitelist LIRI-JP 0.54 0.42 0 0 0.48 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 5 176194722 179244697 1 2 63 1 1 0 0 0 0.57 0.8 4 0 0 4 4 4 7 7 7 16.67 0.38 99.5 0 1 2 Whitelist LIRI-JP 0.68 0.95 0 0 0.64 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 6 63544988 84372030 7 7 63 0 2 3 2 0 0.44 0 13 0 0 13 8 11 14 8 11 16.67 61.69 38.13 0 3 1 Whitelist LIRI-JP 0.68 0.01 0 0 0.64 1 High confidence LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC Canonical without polyploidization 14 0.11 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 7 104611556 104656429 1 1 63 0 0 1 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 16.67 0.03 99.74 0 2 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 8 64911735 64930639 1 1 63 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 16.67 96.58 0 0 4 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 9 4465550 124087053 1 4 63 2 2 0 0 0 0.26 0.31 4 0 0 4 0 3 4 0 3 16.67 0.31 99.49 0 2 3 Whitelist LIRI-JP 0.62 0.56 0 0 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 10 4959377 67093812 1 2 63 1 1 0 0 0 0.57 0.54 3 0 0 NA NA NA NA NA NA 16.67 0.07 99.74 0 2 1 Whitelist LIRI-JP 0.68 0.77 0 0 0.64 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 11 23007216 132770888 1 2 63 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 16.67 0 99.57 0 2 NA Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 12 46187968 46397302 1 1 63 1 0 0 0 0 0.39 0.54 1 0 NA NA NA NA 5 3 5 16.67 0.39 99.53 0 2 NA Whitelist LIRI-JP 0.62 0.77 0 NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 13 61353625 61387461 1 1 63 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.67 0.03 99.97 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 14 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 15 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 16 31080178 71783801 1 2 63 1 1 0 0 0 0.57 0.69 3 NA 0 NA NA NA NA NA NA 16.67 0.34 99.55 0 2 3 Whitelist LIRI-JP 0.68 0.89 NA 0 0.64 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 17 73229947 73957799 1 1 63 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 0 3 16.67 95.51 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 18 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 19 6676026 41646767 1 2 63 1 0 0 1 0 0.57 0.35 2 NA 0 NA NA NA 4 3 3 16.67 11.2 88.62 0 1 2 Whitelist LIRI-JP 0.68 0.61 NA 0 0.64 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 20 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 21 30430495 30705946 1 2 63 2 0 0 0 0 0.11 0.18 2 NA 0 NA NA NA NA NA NA 16.67 0.57 76.78 0 1 2 Whitelist LIRI-JP 0.54 0.4 NA 0 0.48 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 22 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK178 X 107241209 107429209 1 1 63 0 1 0 0 0 0.39 0.56 2 0 NA NA NA NA 4 3 4 16.67 0.12 96.46 0 2 3 Whitelist LIRI-JP 0.62 0.79 0 NA 0.59 1 No LIRI-JP RK178 LIRI 0.47 2.18 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48704 RK178 female alive C22 68 750 NA NA Included Liver-HCC LIRI JP 1 24.67 LIRI-JP::RK180 1 27033526 27429681 2 2 87 0 0 1 1 0 0.57 0.11 1 0 0 NA NA NA NA NA NA 5.7 0 99.68 0 2 NA Whitelist LIRI-JP 0.68 0.28 0 0 0.64 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 2 84572217 206397566 1 2 87 1 0 0 1 0 0.57 0.56 1 0 0 NA NA NA NA NA NA 5.7 0 99.91 0 2 NA Whitelist LIRI-JP 0.68 0.78 0 0 0.64 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 3 NA NA 0 0 87 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 4 370313 40856818 33 33 87 11 10 6 6 0 0.47 0 1 0 0 NA NA NA NA NA NA 5.7 0 99.8 0 2 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 66 0.38 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 5 131375668 131940206 1 2 87 0 2 0 0 0 0.11 0.66 1 0 0 NA NA NA NA NA NA 5.7 0 99.84 0 2 NA Whitelist LIRI-JP 0.54 0.87 0 0 0.48 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 6 17821695 17889628 1 1 87 1 0 0 0 0 0.39 0.49 1 0 NA NA NA NA NA NA NA 5.7 0.4 99.36 0 5 NA Whitelist LIRI-JP 0.62 0.74 0 NA 0.59 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 7 44179379 44235601 1 1 87 0 1 0 0 0 0.39 0.63 1 0 NA NA NA NA NA NA NA 5.7 0.34 97.31 0 2 NA Whitelist LIRI-JP 0.62 0.84 0 NA 0.59 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 8 36321366 42407145 2 2 87 1 1 0 0 0 0.57 0.21 1 0 0 NA NA NA NA NA NA 5.7 0 99.88 0 2 NA Whitelist LIRI-JP 0.68 0.44 0 0 0.64 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 9 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 10 NA NA 0 0 87 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 11 48137515 102423045 1 2 87 0 2 0 0 0 0.11 0.8 1 0 0 NA NA NA NA NA NA 5.7 0 99.84 0 2 NA Whitelist LIRI-JP 0.54 0.95 0 0 0.48 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 12 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 13 NA NA 0 0 87 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 14 88271133 88772031 1 1 87 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.7 0 100 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 15 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 16 87372149 87609308 1 1 87 0 0 0 1 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 5.7 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 17 NA NA 0 0 87 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 18 4219817 4229862 1 1 87 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 5.7 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 19 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 20 NA NA 0 0 87 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 21 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 22 NA NA 0 0 87 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK180 X NA NA 0 0 87 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 0 No LIRI-JP RK180 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO45273 RK180 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK181 1 61668631 61888811 1 1 47 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA 4 3 3 32.38 42.63 57.34 0 1 2 Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 2 10133257 222962821 1 7 47 3 3 0 0 1 0.11 0.06 9 0 0 9 5 9 9 5 5 32.38 0.29 99.6 0 2 1 Whitelist LIRI-JP 0.62 0.18 0 0 0.48 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 13 0.14 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 3 41573084 184315931 1 3 47 1 1 0 1 0 0.8 0.38 9 0 0 9 4 6 10 4 6 32.38 11.36 88.52 0 1 2 Whitelist LIRI-JP 0.87 0.63 0 0 0.84 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 6 0.06 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 4 86407691 86449847 1 1 47 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 32.38 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 5 49974752 140883015 1 4 47 1 2 0 0 1 0.3 0.22 6 0 0 6 4 6 6 4 4 32.38 48.5 51.37 0 3 2 Whitelist LIRI-JP 0.62 0.45 0 0 0.59 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 7 0.07 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 6 NA NA 0 0 47 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.92 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 7 8750047 34703352 1 2 47 1 1 0 0 0 0.57 0.74 6 0 0 6 5 6 7 5 5 32.38 99.7 0.06 0 3 2 Whitelist LIRI-JP 0.68 0.91 0 0 0.64 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 8 2281232 140096666 1 8 47 5 2 0 0 1 0.02 0 12 0 0 12 6 7 13 6 8 32.38 71.62 28.38 0 3 2 Whitelist LIRI-JP 0.54 0 0 0 0.33 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 15 0.16 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 9 27302125 112849114 1 2 47 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 7 3 3 32.38 39.81 60.03 0 1 2 Whitelist LIRI-JP 0.54 0.05 0 0 0.48 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 10 NA NA 0 0 47 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 11 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 12 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 13 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 14 NA NA 0 0 47 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 15 47762870 48225247 1 1 47 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.38 0.45 99.4 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 17 13987871 43357852 1 2 47 1 1 0 0 0 0.57 0.13 4 NA 0 4 3 4 6 4 4 32.38 17.62 82.38 0 2 1 Whitelist LIRI-JP 0.68 0.33 NA 0 0.64 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 19 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 20 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 22 NA NA 0 0 47 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK181 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK181 LIRI 0.89 2.16 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578203_T_C,CN:1 2 LIRI-JP DO48706 RK181 male alive C22 72 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK183 1 188837873 188854259 1 1 42 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 84.02 97.03 0 0 5 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 2 NA NA 0 0 42 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 3 25505108 181480386 1 1 42 0 1 0 0 0 0.39 1 1 NA 0.01 NA NA NA NA NA NA 84.02 95.31 4.66 0 4 NA Whitelist LIRI-JP 0.62 1 NA 0.01 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 4 61175805 147211323 1 2 42 2 0 0 0 0 0.11 0.76 4 0 0 4 3 4 5 3 3 84.02 99.31 0.48 0 3 2 Whitelist LIRI-JP 0.54 0.92 0 0 0.48 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 5 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 6 145832404 145847427 1 1 42 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 84.02 99.85 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 7 7856270 7916936 1 1 42 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 3 84.02 97.36 0 0 3 6 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 8 114360241 114655309 1 1 42 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 6 3 3 84.02 69.33 27.14 0 5 6 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 9 11274583 11459741 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.02 99.3 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 10 NA NA 0 0 42 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 11 NA NA 0 0 42 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 12 43237374 43636825 1 4 42 1 0 0 0 3 0.39 0.05 4 0 0 4 0 3 4 0 0 84.02 99.62 0.3 0 4 1 Whitelist LIRI-JP 0.68 0.15 0 0 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 5 0.06 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 13 83901950 84230248 1 1 42 1 0 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 84.02 52.83 47.17 0 4 NA Whitelist LIRI-JP 0.62 0.86 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 16 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 17 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 18 24484517 25162059 1 1 42 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 4 4 84.02 19.96 75.39 0 2 4 Whitelist LIRI-JP 0.62 0.27 NA NA 0.59 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 20 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 21 47016807 47814245 3 5 42 1 0 1 1 2 0.8 0 3 0 0 NA NA NA 6 0 4 84.02 76.7 0 0 1 3 Whitelist LIRI-JP 0.68 0 0 0 0.84 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 8 0.1 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK183 X 17138944 54144512 6 9 42 2 1 1 2 3 0.88 0 3 0 0 NA NA NA NA NA NA 84.02 0.55 99.45 0 2 1 Whitelist LIRI-JP 0.97 0 0 0 0.91 0 No LIRI-JP RK183 LIRI 0.56 3.83 Liver-HCC NA 15 0.18 NA 4 LIRI-JP DO48709 RK183 male alive C22 74 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK184 1 35667476 35706407 1 1 43 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 5 4 5 39.3 41.79 58.21 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 2 38469308 38773700 1 1 43 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 39.3 0.13 99.76 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 3 120380239 186930218 1 2 43 0 2 0 0 0 0.11 1 2 0 0 NA NA NA 4 3 3 39.3 44.41 52.42 0 2 3 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 4 45638214 151227907 1 5 43 2 1 1 0 1 0.57 0.01 5 0 0 5 3 5 8 6 6 39.3 75.92 23.87 0 1 0 Whitelist LIRI-JP 0.62 0.03 0 0 0.64 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 9 0.1 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 5 154116725 154206070 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 4 39.3 25.52 71.8 1 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 6 65669481 65775635 2 2 43 0 0 1 1 0 0.57 0.18 3 0 0 NA NA NA 5 3 4 39.3 99.83 0.03 0 1 2 Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 7 78764363 99376507 1 2 43 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 7 3 3 39.3 0.49 96.86 0 2 1 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 8 99792230 102027327 1 2 43 0 2 0 0 0 0.11 0.07 2 0 0 NA NA NA 4 3 3 39.3 27.74 72.25 0 2 3 Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 9 73837421 73871112 1 1 43 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 4 4 4 39.3 26.57 72.75 0 1 2 Whitelist LIRI-JP 0.62 0.47 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 10 38026611 52069153 1 2 43 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 39.3 27.96 68.68 0 2 3 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 11 28041348 28289582 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 39.3 0 99.57 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 12 89075337 89089336 1 1 43 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 4 0 3 39.3 0.16 96.09 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 14 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 15 46408370 46422646 1 1 43 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 39.3 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 17 NA NA 0 0 43 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 18 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 19 17481676 50239447 1 2 43 0 2 0 0 0 0.11 0.21 1 NA 0 NA NA NA NA NA NA 39.3 29.39 70.43 0 2 NA Whitelist LIRI-JP 0.54 0.43 NA 0 0.48 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 4 0.05 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 20 7144463 7157585 1 1 43 0 0 0 1 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 39.3 0 99.02 0 2 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 2 0.02 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 22 NA NA 0 0 43 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK184 X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK184 LIRI 0.46 1.89 Liver-HCC NA 0 0 frameshift_deletion,17_7579491_-_TTCTGGGAGC,CN:2 2 LIRI-JP DO45277 RK184 male alive C22 64 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK185 1 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 2 NA NA 0 0 33 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 3 177633347 178078983 1 1 33 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA 6 5 6 78.59 99.89 0 0 5 6 Whitelist LIRI-JP 0.62 0.75 NA NA 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 5 12295388 161074106 1 4 33 2 0 1 0 1 0.3 0.15 8 0.03 0 8 3 4 8 3 3 78.59 97.12 0.2 0 4 2 Whitelist LIRI-JP 0.68 0.35 0.03 0 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 7 0.11 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 7 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 8 93525154 93607673 1 1 33 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 9 5 5 78.59 72.46 27.53 0 4 5 Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 11 95597772 97427678 1 3 33 1 0 0 1 1 0.57 0.07 4 0 0 4 3 4 8 3 3 78.59 99.57 0 2 4 3 Whitelist LIRI-JP 0.87 0.2 0 0 0.64 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 5 0.08 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 13 62646241 100729913 1 3 33 0 0 0 1 2 0.39 0.1 5 NA 0 5 3 5 6 3 6 78.59 44.68 55.32 0 4 2 Whitelist LIRI-JP 0.62 0.27 NA 0 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 4 0.06 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 15 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.82 NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 16 78841629 78980517 1 1 33 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 3 5 78.59 54.63 45.27 0 0 2 Whitelist LIRI-JP 0.62 0.05 NA NA 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 19 32268701 55723363 2 5 33 0 1 1 0 3 0.57 0 11 0 0 11 4 6 13 4 4 78.59 58.76 33.64 0 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 7 0.11 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 20 18913330 37235479 1 4 33 1 1 0 0 2 0.57 0 7 0 0 7 3 4 9 5 6 78.59 59.38 32.94 0 5 2 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 6 0.09 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK185 X 43289884 44172419 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 78.59 0.57 96.28 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK185 LIRI 0.39 3.53 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO48712 RK185 male alive C22 50 810 NA NA Included Liver-HCC LIRI JP 1 26.64 LIRI-JP::RK186 1 154989969 155164052 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 20.47 48.2 51.79 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 2 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 3 134387458 188964424 1 2 36 2 0 0 0 0 0.11 0.74 3 NA 0 NA NA NA 4 3 3 20.47 28.85 71.01 0 2 1 Whitelist LIRI-JP 0.54 0.91 NA 0 0.48 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 4 74280990 181586286 1 2 36 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 20.47 18.2 81.79 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 5 75413900 75940921 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 20.47 0.29 99.57 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 6 164065746 164085553 1 1 36 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 20.47 0.01 99.84 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 7 138241470 138280668 2 2 36 0 0 1 1 0 0.57 0.72 3 NA 0 NA NA NA NA NA NA 20.47 0.02 99.76 0 2 1 Whitelist LIRI-JP 0.68 0.9 NA 0 0.64 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 8 105960603 106733483 2 2 36 1 1 0 0 0 0.57 0 1 0 0 NA NA NA 5 4 4 20.47 60.43 39.57 0 3 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 4 0.06 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 9 14600484 14642253 1 1 36 1 0 0 0 0 0.39 1 3 NA NA NA NA NA NA NA NA 20.47 0.03 99.27 0 2 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 10 74755187 74900211 1 1 36 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 20.47 5.33 94.49 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 11 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 12 10651434 10665929 1 1 36 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 20.47 25.41 74.5 0 2 NA Whitelist LIRI-JP 0.62 0.47 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 13 57633802 57648081 1 1 36 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 3 4 20.47 23.23 76.77 0 2 4 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 14 88871979 88919323 1 1 36 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 20.47 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 15 NA NA 0 0 36 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.07 0 NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 16 32365460 32376001 1 1 36 0 0 1 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 20.47 84.31 15.59 0 2 NA Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 17 NA NA 0 0 36 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.21 NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 19 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 20 15001717 15023027 1 1 36 1 0 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 20.47 0 98.95 0 2 NA Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK186 X NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK186 LIRI 0.79 1.88 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:1 2 LIRI-JP DO48715 RK186 female deceased C22 58 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK187 1 83483893 196823467 1 2 69 1 1 0 0 0 0.57 0.66 2 0 0 NA NA NA NA NA NA 25.07 1.25 98.75 0 1 2 Whitelist LIRI-JP 0.68 0.87 0 0 0.64 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 2 88403459 88468952 1 1 69 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 25.07 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 3 49711854 49730291 1 1 69 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 25.07 3.65 96.32 0 2 NA Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 4 155540809 155551366 1 1 69 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA 5 3 3 25.07 20.76 79.02 0 2 NA Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 5 108137683 108195466 1 1 69 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 25.07 0.03 99.85 0 1 2 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 6 35634706 83224974 1 3 69 2 1 0 0 0 0.3 0.8 4 0 0 4 0 4 5 3 3 25.07 77.34 22.52 0 1 2 Whitelist LIRI-JP 0.62 0.95 0 0 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 7 79907015 79924906 2 3 69 1 1 0 0 1 0.57 0.42 2 0 0 NA NA NA 4 3 3 25.07 49.58 50.2 0 2 3 Whitelist LIRI-JP 0.62 0.67 0 0 0.64 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 8 48826382 128611097 2 2 69 1 0 0 1 0 0.57 0.02 5 0 0 5 3 3 9 6 6 25.07 64.88 35.12 0 4 2 Whitelist LIRI-JP 0.68 0.09 0 0 0.64 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 9 75616984 75769370 1 1 69 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 25.07 0.11 99.19 0 2 3 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 10 76285322 114069007 1 4 69 1 2 0 0 1 0.3 0.56 2 0 0 NA NA NA NA NA NA 25.07 43.37 56.45 0 1 2 Whitelist LIRI-JP 0.62 0.79 0 0 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 7 0.05 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 11 46426738 118918957 1 3 69 1 2 0 0 0 0.3 0.26 1 0 0 NA NA NA NA NA NA 25.07 0 99.44 0 2 NA Whitelist LIRI-JP 0.62 0.5 0 0 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 12 9242553 105355318 1 2 69 0 2 0 0 0 0.11 0.77 4 NA 0.04 4 4 4 5 5 5 25.07 0.11 99.81 0 2 3 Whitelist LIRI-JP 0.54 0.93 NA 0.04 0.48 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 13 48948544 101279968 1 3 69 1 1 0 0 1 0.57 0.3 5 0 0 5 3 4 7 3 4 25.07 83.94 16.06 0 3 0 Whitelist LIRI-JP 0.62 0.55 0 0 0.64 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 14 27088039 107044443 22 23 69 10 4 3 5 1 0.15 0 2 0 0 NA NA NA NA NA NA 25.07 63.27 36.44 7 1 2 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 45 0.33 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 15 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 16 NA NA 0 0 69 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 17 NA NA 0 0 69 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 18 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 19 3349855 3363573 1 2 69 0 0 1 1 0 0.57 0.4 1 NA 0 NA NA NA NA NA NA 25.07 0 99.83 0 2 NA Whitelist LIRI-JP 0.68 0.64 NA 0 0.64 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 20 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 21 NA NA 0 0 69 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 22 NA NA 0 0 69 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK187 X NA NA 0 0 69 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK187 LIRI 0.62 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48716 RK187 male alive C22 71 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK188 1 NA NA 0 0 6 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 3 96341353 96363919 1 1 6 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 5.36 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 2 0.17 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 5 NA NA 0 0 6 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 7 146293443 146320500 1 1 6 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 5.36 0 99.74 0 2 NA Whitelist LIRI-JP 0.62 0.13 NA NA 0.59 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 2 0.17 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 9 NA NA 0 0 6 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.44 NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 16 61443692 61465535 1 1 6 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 5.36 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 2 0.17 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK188 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK188 LIRI 0.63 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48717 RK188 male deceased C22 54 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK190 1 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 2 NA NA 0 0 24 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 3 42153941 178496886 1 3 24 1 1 1 0 0 0.8 0.01 4 0 0 4 3 4 5 3 3 9.05 9.09 90.88 0 2 1 Whitelist LIRI-JP 0.87 0.03 0 0 0.84 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 4 NA NA 0 0 24 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.88 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 5 7937258 9035759 1 1 24 0 0 1 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 9.05 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 6 NA NA 0 0 24 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.39 0 NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 7 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 8 NA NA 0 0 24 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.31 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 9 NA NA 0 0 24 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.83 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 10 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 11 NA NA 0 0 24 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.56 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 13 NA NA 0 0 24 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 15 24643430 24816158 1 1 24 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 9.05 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.34 NA NA 0.59 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK190 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK190 LIRI 0.91 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48719 RK190 male alive C22 80 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK191 1 27048446 234619414 1 5 64 2 2 0 1 0 0.53 1 12 0 0 12 4 8 12 4 7 26.94 19.37 77.53 0 2 3 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 10 0.08 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 2 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 3 93537806 93554574 1 1 64 0 0 1 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 26.94 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 4 9755982 47376821 34 34 64 9 7 9 9 0 0.95 0 44 0 0 44 5 13 49 5 7 26.94 89.25 8.37 0 2 1 Whitelist LIRI-JP 0.97 0 0 0 0.97 0 Low confidence LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC With other complex events 68 0.53 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 5 132162230 172159419 1 2 64 0 2 0 0 0 0.11 0.44 3 NA 0 NA NA NA 6 3 5 26.94 0.09 97.25 0 2 3 Whitelist LIRI-JP 0.54 0.69 NA 0 0.48 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 6 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 7 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 8 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 9 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 10 29388723 60510200 1 2 64 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 26.94 0.06 99.76 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 11 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 3 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 12 100255072 126773275 1 2 64 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA 7 6 7 26.94 24.89 75.03 0 3 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 13 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 14 88467916 88512958 1 1 64 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 26.94 84.05 0.04 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 15 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 16 23171873 27549077 2 2 64 0 1 0 1 0 0.57 0 1 0 0 NA NA NA 8 3 4 26.94 94.44 1.04 0 1 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 17 27553131 27580471 1 1 64 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 4 0 3 26.94 29.52 66.03 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 18 29523681 29554896 1 1 64 0 1 0 0 0 0.39 0.69 2 NA NA NA NA NA 4 4 4 26.94 0.35 99.61 0 2 3 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 19 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 20 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 21 NA NA 0 0 64 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 22 NA NA 0 0 64 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK191 X 109093876 109125100 1 1 64 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 26.94 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK191 LIRI 0.41 1.87 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7577512_C_G,CN:1 2 LIRI-JP DO48720 RK191 female alive C22 62 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK193 1 NA NA 0 0 52 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 2 64436322 79844240 4 4 52 1 3 0 0 0 0.11 0.01 4 0 0 4 4 4 8 6 8 65.32 16.83 83.04 1 2 3 Whitelist LIRI-JP 0.54 0.05 0 0 0.48 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 8 0.08 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 3 NA NA 0 0 52 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 4 NA NA 0 0 52 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 5 NA NA 0 0 52 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 6 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 7 139051106 139075948 1 1 52 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 65.32 97.44 0 0 3 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 8 2862552 3794452 2 2 52 2 0 0 0 0 0.11 0.02 6 0.01 0 6 5 6 10 5 5 65.32 96.82 3.17 0 2 1 Whitelist LIRI-JP 0.54 0.07 0.01 0 0.48 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 4 0.04 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 9 23151785 128069278 1 3 52 1 0 0 1 1 0.57 0.05 7 0 0 7 4 4 7 4 4 65.32 76.23 23.1 0 3 4 Whitelist LIRI-JP 0.87 0.17 0 0 0.64 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 5 0.05 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 10 6988216 7004054 1 1 52 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 65.32 99.83 0 0 3 4 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 11 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 12 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 13 67234845 67305130 1 1 52 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 65.32 100 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 14 21195040 74038853 1 5 52 3 1 1 0 0 0.28 0.01 7 0 0 7 7 7 7 7 7 65.32 99.09 0 3 4 5 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 10 0.1 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 17 21834911 30134952 1 2 52 1 0 0 0 1 0.39 0.65 1 NA NA NA NA NA NA NA NA 65.32 73.23 26.73 0 4 NA Whitelist LIRI-JP 0.68 0.86 NA NA 0.59 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 3 0.03 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 19 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 20 2618013 17388051 1 4 52 1 0 1 1 1 0.8 0.01 6 0 0 6 3 5 8 3 5 65.32 99.67 0.02 0 4 2 Whitelist LIRI-JP 0.68 0.03 0 0 0.84 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 7 0.07 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK193 X NA NA 0 0 52 0 0 0 0 0 NA 0.75 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 0 NA NA 0 No LIRI-JP RK193 LIRI 0.85 2.9 Liver-HCC NA 0 0 frameshift_deletion,17_7577105_-_GGACAGGCAC,CN:2 2 LIRI-JP DO48721 RK193 female alive C22 58 900 NA NA Included Liver-HCC LIRI JP 1 29.61 LIRI-JP::RK195 1 5994422 74247978 14 17 121 4 3 4 3 3 0.96 0 14 0 0 14 4 12 23 5 6 32.4 62.34 37.66 0 1 2 Whitelist LIRI-JP 0.87 0 0 0 0.98 0 Low confidence LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC With other complex events 31 0.13 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 2 9090277 240897263 1 9 121 5 0 0 0 4 0 0.74 11 0 0 11 9 11 12 10 10 32.4 3.07 96.83 1 1 2 Whitelist LIRI-JP 0.15 0.91 0 0 0.07 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 14 0.06 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 3 NA NA 0 0 121 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.16 NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 4 79935007 81597955 3 4 121 0 2 0 1 1 0.3 0.71 1 0 0 NA NA NA 6 4 4 32.4 6.81 93.17 1 2 NA Whitelist LIRI-JP 0.68 0.9 0 0 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 7 0.03 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 5 26553956 173782730 1 9 121 1 2 1 1 4 0.9 0.19 6 0 0 6 4 6 9 4 4 32.4 93.3 6.57 0 3 2 Whitelist LIRI-JP 0.97 0.41 0 0 0.92 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 14 0.06 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 6 1017490 56519171 44 44 121 11 9 10 14 0 0.74 0 63 0 0 63 5 8 67 5 8 32.4 85.19 11.57 6 2 3 Whitelist LIRI-JP 0.85 0 0 0 0.81 0 Low confidence LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC With other complex events 88 0.36 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 7 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 8 104809750 123725647 2 4 121 0 0 1 1 2 0.57 0.84 6 0 0 6 6 6 9 7 9 32.4 63.04 33.53 0 3 4 Whitelist LIRI-JP 0.54 0.97 0 0 0.64 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 6 0.02 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 9 6933050 116440393 1 2 121 1 1 0 0 0 0.57 0.64 4 0.27 0.04 4 3 4 5 3 5 32.4 0.11 99.19 0 2 3 Whitelist LIRI-JP 0.68 0.85 0.27 0.04 0.64 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 10 103859938 103901195 1 1 121 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA 5 3 3 32.4 0.56 99.26 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 11 134305312 134553908 1 1 121 1 0 0 0 0 0.39 0.66 1 0 NA NA NA NA 4 4 4 32.4 0.4 99.09 0 1 NA Whitelist LIRI-JP 0.62 0.87 0 NA 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 12 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 13 NA NA 0 0 121 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 14 67347377 67467980 1 1 121 0 1 0 0 0 0.39 0.79 2 0 NA NA NA NA 7 3 7 32.4 96.61 2.48 0 1 3 Whitelist LIRI-JP 0.62 0.95 0 NA 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 15 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 16 72021113 72104760 1 1 121 0 1 0 0 0 0.39 0.57 2 NA NA NA NA NA 5 3 3 32.4 0.8 99.19 0 2 3 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 17 NA NA 0 0 121 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 18 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 19 NA NA 0 0 121 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 20 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 21 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 22 50928786 51057478 1 1 121 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.4 24.03 64.38 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK195 X NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK195 LIRI 0.8 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48723 RK195 male alive C22 73 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK196 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 2 114487069 162641962 1 3 32 3 0 0 0 0 0.03 0.75 2 0 0 NA NA NA NA NA NA 30.29 0.01 99.9 0 1 2 Whitelist LIRI-JP 0.41 0.92 0 0 0.33 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 4 69158720 142477868 1 5 32 4 1 0 0 0 0.04 0 2 0 0 NA NA NA 4 4 4 30.29 72.09 27.89 0 1 2 Whitelist LIRI-JP 0.45 0.02 0 0 0.36 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 10 0.16 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 6 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 7 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 8 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 9 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 11 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 12 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 14 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 16 33908316 53233778 1 1 32 0 0 0 1 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 30.29 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.8 NA NA 0.59 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 17 27283466 71366538 1 1 32 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA 5 5 5 30.29 89.91 10.03 0 1 2 Whitelist LIRI-JP 0.62 0.44 NA NA 0.59 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 19 19053345 23741257 7 9 32 2 0 2 3 2 0.44 0 16 0 0 16 3 7 22 4 7 30.29 39.25 60.57 3 4 6 Whitelist LIRI-JP 0.62 0 0 0 0.64 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 16 0.25 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 20 38907013 38917474 1 1 32 0 0 0 1 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 30.29 37.35 61.64 0 4 NA Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK196 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK196 LIRI 0.83 1.98 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48725 RK196 male alive C22 66 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK197 1 950212 155610839 1 12 56 1 2 0 1 8 0.57 0 4 0 0 4 3 4 4 3 3 17.45 11.55 88.45 0 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 16 0.14 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 2 96816638 128002502 2 6 56 1 2 1 0 2 0.57 0.01 15 0 0 15 5 10 17 6 11 17.45 51.29 48.61 0 2 1 Whitelist LIRI-JP 0.62 0.03 0 0 0.64 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 10 0.09 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 3 192280371 192941966 1 4 56 0 0 1 0 3 0.39 0 1 0 0 NA NA NA NA NA NA 17.45 0 99.97 0 2 NA Whitelist LIRI-JP 0.68 0.01 0 0 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 5 0.04 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 4 5697032 137540820 2 4 56 1 0 0 1 2 0.57 0.05 2 0 0 NA NA NA NA NA NA 17.45 0.2 99.59 0 1 2 Whitelist LIRI-JP 0.68 0.17 0 0 0.64 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 6 0.05 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 5 NA NA 0 0 56 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 6 NA NA 0 0 56 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 7 NA NA 0 0 56 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 8 43272789 141643289 2 7 56 0 0 0 2 5 0.11 0 3 0 0 NA NA NA 4 3 3 17.45 99.99 0 0 3 4 Whitelist LIRI-JP 0.68 0 0 0 0.48 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 9 0.08 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 9 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 10 11568893 109769513 1 2 56 2 0 0 0 0 0.11 1 3 NA 0.03 NA NA NA NA NA NA 17.45 0.71 99.12 0 2 1 Whitelist LIRI-JP 0.54 1 NA 0.03 0.48 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 11 121087551 121519329 1 6 56 0 1 0 0 5 0.39 0.01 4 0 0 4 0 4 5 0 4 17.45 9.92 89.67 0 3 2 Whitelist LIRI-JP 0.68 0.06 0 0 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 7 0.06 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 12 69100960 69278345 1 1 56 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 17.45 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 13 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 14 96470661 96573829 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.45 0.1 99.02 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 15 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 16 71103157 71970934 1 1 56 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA 4 3 3 17.45 2.77 97.22 0 2 3 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 17 NA NA 0 0 56 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 18 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 19 51163261 51202438 2 2 56 0 0 1 1 0 0.57 0.3 1 NA 0 NA NA NA NA NA NA 17.45 0 99.83 0 2 NA Whitelist LIRI-JP 0.68 0.55 NA 0 0.64 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 20 NA NA 0 0 56 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK197 X 16881373 16897502 1 1 56 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 17.45 0.01 99.76 0 2 3 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK197 LIRI 0.9 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48727 RK197 female deceased C22 81 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK198 1 188047435 200473719 2 4 51 1 1 0 0 2 0.57 0.12 4 0 0 4 3 4 5 3 3 20.31 3.07 96.92 0 3 2 Whitelist LIRI-JP 0.68 0.3 0 0 0.64 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 2 180983328 185179976 2 2 51 0 0 1 1 0 0.57 0.44 1 NA 0 NA NA NA NA NA NA 20.31 0 99.88 0 2 NA Whitelist LIRI-JP 0.68 0.69 NA 0 0.64 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 3 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 4 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 5 NA NA 0 0 51 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 7 110188854 119324529 7 7 51 2 2 2 1 0 0.93 0.01 8 0 0 8 3 5 11 3 4 20.31 43.55 53.89 0 4 5 Whitelist LIRI-JP 0.96 0.03 0 0 0.95 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 14 0.14 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 10 128908578 129035218 1 1 51 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 20.31 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 11 68084050 70397177 1 4 51 2 1 1 0 0 0.57 0.09 6 0 0 6 3 5 7 3 4 20.31 1.47 98.09 0 5 2 Whitelist LIRI-JP 0.68 0.25 0 0 0.64 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 8 0.08 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 12 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 13 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 14 24228253 24295543 1 1 51 0 1 0 0 0 0.39 0.68 1 NA NA NA NA NA 6 3 3 20.31 79.05 5.04 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 15 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 16 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 17 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 18 4720759 6027130 1 5 51 1 0 1 0 3 0.57 0 4 0 0 4 4 4 7 7 7 20.31 97.54 2.42 0 1 2 Whitelist LIRI-JP 20 0.68 0 0 0 0.64 1 Linked to high confidence LIRI-JP RK198 LIRI 0.3 2 Liver-HCC Canonical without polyploidization 7 0.07 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 19 15389264 19115589 4 7 51 0 1 1 2 3 0.57 0 5 0 0 5 4 5 13 4 5 20.31 37.75 54.4 0 4 6 Whitelist LIRI-JP 0.77 0 0 0 0.64 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 11 0.11 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 20 41335728 54766828 3 10 51 1 1 0 1 7 0.8 0 11 0 0 11 8 11 13 10 10 20.31 26.62 73.13 0 3 4 Whitelist LIRI-JP 0.86 0 0 0 0.84 1 High confidence LIRI-JP RK198 LIRI 0.3 2 Liver-HCC After polyploidization 13 0.13 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK198 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK198 LIRI 0.3 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48728 RK198 female alive C22 74 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK199 1 98307605 98351395 1 1 23 0 1 0 0 0 0.39 0.1 1 0 NA NA NA NA NA NA NA 17.97 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.27 0 NA 0.59 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 2 0.04 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 2 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 3 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 4 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 5 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 6 55722050 62000207 1 1 23 0 1 0 0 0 0.39 0 3 0 0 NA NA NA 7 5 5 17.97 64.36 32.42 0 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 2 0.04 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 7 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 8 40251886 106931079 1 3 23 1 0 2 0 0 0.3 0.01 2 0 0 NA NA NA NA NA NA 17.97 91.77 4.8 0 2 4 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 6 0.13 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 9 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 10 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 11 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 12 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 14 54974989 74328873 1 1 23 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 17.97 18.03 81.05 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 2 0.04 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 16 33400413 87990159 2 4 23 1 0 1 0 2 0.57 0 5 0 0 5 5 5 7 5 5 17.97 38.31 61.58 0 2 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 6 0.13 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 17 38242422 38270906 1 1 23 0 1 0 0 0 0.39 0.47 1 NA NA NA NA NA NA NA NA 17.97 27.31 68.22 0 2 NA Whitelist LIRI-JP 0.62 0.71 NA NA 0.59 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 2 0.04 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 18 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 19 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK199 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK199 LIRI 0.64 1.95 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:1 2 LIRI-JP DO48730 RK199 female alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 1 157162614 246658065 29 29 79 6 9 7 7 0 0.88 0 21 0 0 21 5 9 26 5 5 90.87 100 0 5 3 7 Whitelist LIRI-JP 0.93 0 0 0 0.91 0 Low confidence LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC With other complex events 58 0.37 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 2 141607570 142181016 1 3 79 3 0 0 0 0 0.03 0.68 4 0 0 4 3 4 5 3 3 90.87 99.89 0 0 3 1 Whitelist LIRI-JP 0.41 0.88 0 0 0.33 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 6 0.04 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 3 41587227 174896646 1 5 79 4 1 0 0 0 0.04 0.82 8 0 0 8 4 5 9 5 5 90.87 99.89 0.08 0 4 2 Whitelist LIRI-JP 0.45 0.96 0 0 0.36 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 10 0.06 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 4 150888851 150904008 1 1 79 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 90.87 99.99 0 0 1 3 Whitelist LIRI-JP 0.62 0.2 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 5 18877534 18903238 1 1 79 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 90.87 99.87 0 0 4 NA Whitelist LIRI-JP 0.62 0.19 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 6 27776266 103057448 1 3 79 1 0 1 1 0 0.8 0.81 5 0 0 5 4 5 5 4 4 90.87 99.73 0 0 5 6 Whitelist LIRI-JP 0.87 0.96 0 0 0.84 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 6 0.04 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 7 47436240 158878031 1 2 79 1 1 0 0 0 0.57 0.8 5 0 0 5 0 4 6 3 3 90.87 99.7 0.1 0 4 2 Whitelist LIRI-JP 0.68 0.95 0 0 0.64 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 4 0.03 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 8 23533103 23572104 1 1 79 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 3 5 90.87 99.97 0.03 0 2 4 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 9 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 10 52122692 94738326 1 2 79 2 0 0 0 0 0.11 0.41 2 0 0 NA NA NA NA NA NA 90.87 99.79 0.03 0 2 3 Whitelist LIRI-JP 0.54 0.66 0 0 0.48 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 4 0.03 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 11 63445046 64806285 2 2 79 1 1 0 0 0 0.57 0.01 3 0 0 NA NA NA 16 3 5 90.87 95.89 0.42 0 5 2 Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 4 0.03 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 12 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 13 46542387 46662576 1 1 79 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 90.87 99.86 0 0 3 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 15 42911906 42937346 1 1 79 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 3 90.87 99.85 0.02 0 2 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 16 80885029 81264075 1 1 79 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 90.87 99.9 0 0 3 4 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 17 50496199 50721663 1 1 79 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 90.87 74.48 25.47 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 18 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 19 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 20 NA NA 0 0 79 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 0 0 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 21 27033172 27076018 1 1 79 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 90.87 77.26 0.09 0 2 4 Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 22 40614325 40785437 1 1 79 1 0 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 90.87 100 0 0 4 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK200 X 29905731 70665695 1 2 79 2 0 0 0 0 0.11 0.44 4 NA 0 4 0 4 6 4 6 90.87 57.32 39.53 0 1 2 Whitelist LIRI-JP 0.54 0.69 NA 0 0.48 0 No LIRI-JP RK200 LIRI 0.57 3.64 Liver-HCC NA 4 0.03 NA 4 LIRI-JP DO48732 RK200 male alive C22 73 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK201 1 95320326 95747462 2 2 65 0 2 0 0 0 0.11 0.82 2 0 0 NA NA NA 5 3 3 25.15 42.58 54.45 0 2 4 Whitelist LIRI-JP 0.54 0.96 0 0 0.48 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 2 61271779 233708257 1 6 65 1 1 0 0 4 0.57 0.12 4 0 0 4 3 4 5 3 3 25.15 0.06 99.83 0 2 1 Whitelist LIRI-JP 6 0.93 0.3 0 0 0.64 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 3 178310691 178377632 1 1 65 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 25.15 0.03 99.92 0 2 3 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 4 4774175 191030918 1 1 65 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 25.15 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 5 34056655 57751308 1 1 65 0 0 0 1 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 25.15 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 0.55 0 NA 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 6 57987979 165869686 2 7 65 1 0 1 0 5 0.57 0 9 0 0 9 5 9 12 6 12 25.15 96.65 0.42 0 1 3 Whitelist LIRI-JP 8 0.96 0.01 0 0 0.64 0 Linked to low confidence LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC With other complex events 9 0.07 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 7 NA NA 0 0 65 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 8 40469509 138579299 7 12 65 2 1 2 2 5 0.93 0 17 0 0 17 6 10 18 6 10 25.15 89.88 6.7 0 2 4 Whitelist LIRI-JP 6 0.68 0 0 0 0.95 0 Low confidence LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC With other complex events 19 0.15 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 9 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 10 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 11 64269727 64396132 1 1 65 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.15 58.32 38.21 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 12 26906321 81333030 1 4 65 2 2 0 0 0 0.26 0.55 6 0 0 6 4 6 7 5 5 25.15 0.46 99.46 0 2 3 Whitelist LIRI-JP 0.62 0.78 0 0 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 13 36745565 85222660 1 2 65 2 0 0 0 0 0.11 0.29 3 0 0 NA NA NA 4 3 4 25.15 41.98 55.25 0 2 1 Whitelist LIRI-JP 0.54 0.53 0 0 0.48 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 14 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 15 NA NA 0 0 65 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 16 47236972 47725663 1 2 65 0 0 1 1 0 0.57 0.25 3 0 0 NA NA NA NA NA NA 25.15 0.51 99.48 0 2 1 Whitelist LIRI-JP 0.68 0.49 0 0 0.64 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 17 38166944 38211640 1 1 65 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 25.15 0.06 99.89 0 2 3 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 18 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 19 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 20 44886868 51700038 1 2 65 0 0 1 1 0 0.57 0.65 2 NA 0 NA NA NA NA NA NA 25.15 10.81 88.2 0 2 3 Whitelist LIRI-JP 0.68 0.86 NA 0 0.64 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 21 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 22 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK201 X 23507477 96812445 1 5 65 2 2 0 1 0 0.53 0.38 6 0 0 6 6 6 6 6 6 25.15 51.12 48.88 0 1 2 Whitelist LIRI-JP 0.68 0.63 0 0 0.64 0 No LIRI-JP RK201 LIRI 0.29 2.15 Liver-HCC NA 10 0.08 NA 2 LIRI-JP DO48733 RK201 male alive C22 72 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 1 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 2 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 3 NA NA 0 0 29 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 0 NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 4 106139325 106184668 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 17.91 0.02 99.95 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 5 NA NA 0 0 29 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 6 NA NA 0 0 29 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 7 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 8 34159008 140252211 4 4 29 1 1 1 1 0 1 0.06 4 0 0 4 3 4 4 3 3 17.91 99.61 0 0 4 1 Whitelist LIRI-JP 1 0.18 0 0 1 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 8 0.14 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 9 73594641 77295651 1 2 29 1 0 0 0 1 0.39 0 2 0 NA NA NA NA 5 5 5 17.91 21.32 78.51 0 1 2 Whitelist LIRI-JP 0.68 0.03 0 NA 0.59 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 3 0.05 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 10 NA NA 0 0 29 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 12 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 14 25200269 31207906 2 5 29 1 1 0 0 3 0.57 0 3 0 0 NA NA NA 7 7 7 17.91 7.43 91.65 0 1 2 Whitelist LIRI-JP 0.93 0 0 0 0.64 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 7 0.12 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK202 X 20164045 20221590 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.91 0.04 99.73 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK202 LIRI 0.64 2.05 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO48736 RK202 female alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK204 1 NA NA 0 0 62 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.47 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 2 NA NA 0 0 62 0 0 0 0 0 NA 0.49 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 0 NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 3 NA NA 0 0 62 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 4 97654238 97670942 1 1 62 0 0 1 0 0 0.39 0.44 1 NA NA NA NA NA 4 3 3 14.46 3.26 96.51 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 5 NA NA 0 0 62 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 6 41482583 170781972 11 11 62 5 4 1 1 0 0.2 0 1 0 0 NA NA NA NA NA NA 14.46 0 99.76 0 2 NA Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 22 0.18 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 7 128943202 144304935 6 7 62 2 3 1 0 1 0.34 0 1 0 0 NA NA NA NA NA NA 14.46 0 99.97 0 2 NA Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 13 0.1 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 8 13555596 33573339 1 5 62 1 0 0 0 4 0.39 0.13 1 0 0 NA NA NA NA NA NA 14.46 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.33 0 0 0.59 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 6 0.05 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 9 21141931 24375972 2 3 62 0 1 1 0 1 0.57 0.1 1 0 0 NA NA NA NA NA NA 14.46 0.84 98.96 0 2 NA Whitelist LIRI-JP 0.87 0.26 0 0 0.64 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 5 0.04 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 10 22368459 22378828 1 1 62 0 0 0 1 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 14.46 0 99.66 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 11 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 12 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 13 NA NA 0 0 62 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.38 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 14 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 15 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 16 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 17 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 18 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 19 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA 13 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 20 NA NA 0 0 62 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.35 NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK204 X NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK204 LIRI NA NA Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45281 RK204 male alive C22 83 750 NA NA Included Biliary-AdenoCA LIRI JP 1 24.67 LIRI-JP::RK205 1 207412540 207425884 1 1 26 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 4 0 0 92.02 89.42 10.58 0 7 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 2 149235214 149255910 1 1 26 1 0 0 0 0 0.39 0.27 1 0 NA NA NA NA NA NA NA 92.02 99.89 0 0 4 NA Whitelist LIRI-JP 0.62 0.51 0 NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 3 172255499 172330610 1 1 26 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA 5 5 5 92.02 99.88 0 0 3 5 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 4 19007827 178969470 1 7 26 3 1 1 1 1 0.57 0 8 0 0 8 8 8 9 8 8 92.02 99.99 0 0 3 4 Whitelist LIRI-JP 0.77 0 0 0 0.64 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 13 0.25 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 5 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 6 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 7 NA NA 0 0 26 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 8 NA NA 0 0 26 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 10 124756768 124781175 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 92.02 99.81 0.02 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 11 3684783 4142085 1 1 26 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 8 5 5 92.02 96.2 0 0 4 5 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 12 89721811 89772087 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 3 92.02 96.08 0 0 4 6 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 13 NA NA 0 0 26 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 17 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 22 28797691 28922857 1 1 26 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 92.02 0.24 99.76 0 1 2 Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 2 0.04 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK205 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK205 LIRI 0.7 4 Liver-HCC NA 0 0 NA 5 LIRI-JP DO48737 RK205 male alive C22 52 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK206 1 NA NA 0 0 13 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.22 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 2 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 3 NA NA 0 0 13 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.18 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 5 NA NA 0 0 13 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 6 NA NA 0 0 13 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 9 NA NA 0 0 13 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 11 58564999 58580564 1 1 13 0 0 0 1 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 5.41 0.23 99.35 0 2 NA Whitelist LIRI-JP 0.62 0.31 NA NA 0.59 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 13 NA NA 0 0 13 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 14 NA NA 0 0 13 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 16 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 17 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 21 29662651 29689991 1 1 13 0 0 0 1 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 5.41 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 2 0.08 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK206 X NA NA 0 0 13 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.73 NA NA NA 0 No LIRI-JP RK206 LIRI 0.36 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48738 RK206 male alive C22 83 780 NA NA Included Liver-HCC LIRI JP 1 25.66 LIRI-JP::RK207 1 158042440 246396758 1 5 122 4 1 0 0 0 0.04 1 8 0 0 8 7 8 11 7 7 73.15 97 0.03 0 5 4 Whitelist LIRI-JP 0.45 1 0 0 0.36 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 10 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 2 111908464 242234944 1 4 122 3 1 0 0 0 0.11 0.1 8 0 0 8 4 6 9 5 5 73.15 99.8 0.1 0 4 3 Whitelist LIRI-JP 0.54 0.27 0 0 0.48 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 3 12685215 191087719 1 2 122 1 1 0 0 0 0.57 0.28 4 0 0 4 3 4 4 3 4 73.15 99.95 0 0 6 4 Whitelist LIRI-JP 0.68 0.53 0 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 4 131370429 131416042 1 1 122 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 73.15 5.35 94.41 0 1 2 Whitelist LIRI-JP 0.62 0.02 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 5 171194381 171395873 2 2 122 0 1 1 0 0 0.57 0.19 2 0 0 NA NA NA 15 11 11 73.15 97.32 0 0 3 4 Whitelist LIRI-JP 0.68 0.41 0 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 6 45339355 123127367 1 3 122 3 0 0 0 0 0.03 0.56 2 0 0 NA NA NA 5 5 5 73.15 99.7 0.15 0 2 4 Whitelist LIRI-JP 0.41 0.79 0 0 0.33 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 7 2364341 148264936 1 4 122 0 3 0 0 1 0.03 1 9 0 0 9 4 9 10 4 4 73.15 99.77 0 0 5 6 Whitelist LIRI-JP 0.54 1 0 0 0.33 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 7 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 8 60530436 70222355 5 5 122 2 3 0 0 0 0.14 0.22 5 0 0 5 5 5 12 7 7 73.15 67.14 29.34 0 6 4 Whitelist LIRI-JP 0.62 0.45 0 0 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 10 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 9 30757469 137191683 1 2 122 1 1 0 0 0 0.57 0.81 9 0 0 9 3 4 9 3 4 73.15 99.28 0 0 3 1 Whitelist LIRI-JP 0.68 0.96 0 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 10 2135527 2285506 2 2 122 1 1 0 0 0 0.57 0.51 4 0.14 0 4 0 4 12 3 5 73.15 28.37 68.15 0 7 6 Whitelist LIRI-JP 0.68 0.75 0.14 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 11 33703119 70073261 23 26 122 9 6 5 3 3 0.35 0 40 0 0 40 4 6 43 4 6 73.15 44.5 51.61 0 6 7 Whitelist LIRI-JP 0.75 0 0 0 0.59 0 Low confidence LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC With other complex events 49 0.2 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 12 28115872 28138982 1 1 122 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 6 0 4 73.15 96.24 0.02 0 2 3 Whitelist LIRI-JP 0.62 0.32 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 13 39675178 84680526 1 5 122 3 0 1 1 0 0.28 0.04 11 0 0 11 5 6 13 5 5 73.15 99.11 0.89 0 3 4 Whitelist LIRI-JP 0.62 0.14 0 0 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 10 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 14 35871534 35918949 1 1 122 0 1 0 0 0 0.39 0.8 1 0 NA NA NA NA 4 3 4 73.15 96.29 0 0 4 NA Whitelist LIRI-JP 0.62 0.95 0 NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 15 78559546 78650120 1 1 122 0 1 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 73.15 100 0 0 3 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 16 72297868 73114083 1 1 122 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 6 4 6 73.15 11.2 84.28 0 1 2 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 17 38557017 75944610 1 3 122 1 0 0 1 1 0.57 0.01 4 0 0 4 3 4 11 3 4 73.15 68.22 27.33 0 6 3 Whitelist LIRI-JP 0.87 0.03 0 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 5 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 18 46777566 54656161 1 2 122 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 6 3 3 73.15 99.99 0 0 4 3 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 19 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 20 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 21 34591912 34754732 1 1 122 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 4 4 73.15 77.35 0 0 4 5 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 22 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK207 X 27106268 27248467 1 1 122 0 0 0 1 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 73.15 0.09 99.91 0 1 2 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 0 No LIRI-JP RK207 LIRI 0.38 3.72 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO48741 RK207 male alive C22 64 240 NA NA Included Liver-HCC LIRI JP 1 7.89 LIRI-JP::RK208 1 36617187 220348040 1 5 294 0 2 0 0 3 0.11 0 3 0 0 NA NA NA NA NA NA 79.95 96.97 0 0 3 4 Whitelist LIRI-JP 0.62 0.01 0 0 0.48 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 7 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 2 151167457 170610096 2 2 294 1 0 1 0 0 0.57 0.4 1 0 0 NA NA NA 6 3 5 79.95 97.04 0.01 0 4 NA Whitelist LIRI-JP 0.68 0.65 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 3 54159227 158898997 9 21 294 2 2 2 3 12 0.95 0 23 0 0 23 4 7 32 9 9 79.95 50 46.94 0 4 6 Whitelist LIRI-JP 0.66 0 0 0 0.97 1 Low confidence LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA With other complex events 30 0.05 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 4 188726090 188740135 1 1 294 0 0 0 1 0 0.39 0.13 1 0 NA NA NA NA 6 3 6 79.95 89.88 10.09 0 2 NA Whitelist LIRI-JP 0.62 0.32 0 NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 2 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 5 14734280 121620869 1 7 294 0 2 1 1 3 0.57 0.09 5 0 0 5 3 5 6 3 3 79.95 97.24 0 0 6 4 Whitelist LIRI-JP 0.68 0.25 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 11 0.02 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 6 50386978 50727333 2 4 294 0 1 0 1 2 0.57 0.62 3 0 0 NA NA NA 8 5 5 79.95 34.6 62.47 0 4 5 Whitelist LIRI-JP 0.54 0.84 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 6 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 7 9935483 156632025 1 14 294 2 2 1 0 9 0.53 0.9 7 0 0 7 3 6 8 3 4 79.95 99.59 0.18 1 4 6 Whitelist LIRI-JP 10 0.62 1 0 0 0.64 1 Linked to high confidence LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA With other complex events 19 0.03 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 8 127869945 139634348 6 6 294 0 1 1 4 0 0.11 0 11 0 0 11 3 3 23 7 7 79.95 69.48 27.1 10 4 7 Whitelist LIRI-JP 0.54 0.01 0 0 0.48 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 12 0.02 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 9 3427669 7393938 4 15 294 1 2 1 0 11 0.57 0 15 0 0 15 0 4 33 6 6 79.95 84.49 12.43 6 2 20 Whitelist LIRI-JP 0.73 0 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 19 0.03 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 10 24963425 133800853 50 55 294 15 15 11 9 5 0.54 0 89 0 0 89 11 21 89 11 11 79.95 87.03 9.62 3 4 6 Whitelist LIRI-JP 0.62 0 0 0 0.64 1 High confidence LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA With other complex events 105 0.18 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 11 95254085 103444318 8 15 294 2 3 1 2 7 0.8 0 12 0 0 12 3 3 21 3 3 79.95 96.4 0 7 7 3 Whitelist LIRI-JP 0.99 0 0 0 0.84 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 23 0.04 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 12 41397512 133740426 1 5 294 2 2 0 1 0 0.53 0.21 6 0 0 6 3 4 6 3 3 79.95 45.87 53.97 0 2 4 Whitelist LIRI-JP 0.68 0.44 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 10 0.02 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 13 67250477 74421062 1 2 294 0 0 0 1 1 0.39 0.05 1 0 NA NA NA NA NA NA NA 79.95 85.85 0 0 3 NA Whitelist LIRI-JP 0.54 0.17 0 NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 3 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 14 80665490 94223245 2 2 294 1 1 0 0 0 0.57 0.87 2 0 0 NA NA NA 8 3 7 79.95 83.92 0.17 0 1 4 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 15 76769169 77201295 1 1 294 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 0 4 79.95 84.17 0.42 0 2 4 Whitelist LIRI-JP 0.62 0.08 NA NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 2 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 16 64497954 64601848 1 1 294 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 4 4 4 79.95 90.09 9.81 0 2 4 Whitelist LIRI-JP 0.62 0.26 0 NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 2 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 17 4180501 31148218 1 2 294 1 1 0 0 0 0.57 1 4 0 0 4 0 3 5 3 4 79.95 68.53 27.01 0 5 2 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 18 76782198 76837257 1 1 294 0 1 0 0 0 0.39 0.1 2 0 NA NA NA NA NA NA NA 79.95 99.96 0 0 3 7 Whitelist LIRI-JP 0.62 0.27 0 NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 2 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 19 58701215 58810796 1 1 294 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 0 4 79.95 99.4 0.19 0 2 4 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 2 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 20 NA NA 0 0 294 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.1 NA NA NA 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 21 33004173 40771139 1 2 294 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 3 79.95 77.35 0 0 4 1 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 4 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 22 17298557 44322489 1 3 294 0 1 0 1 1 0.57 0.41 6 0 0 6 0 3 6 0 0 79.95 62.61 13.61 0 2 4 Whitelist LIRI-JP 0.87 0.65 0 0 0.64 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 5 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK208 X 23983047 26457391 3 3 294 0 1 1 1 0 0.8 0.04 5 0 0 5 0 3 12 4 4 79.95 99.58 0 0 1 0 Whitelist LIRI-JP 0.87 0.15 0 0 0.84 1 No LIRI-JP RK208 LIRI 0.2 3.83 Biliary-AdenoCA NA 6 0.01 NA 2 LIRI-JP DO45283 RK208 male alive C22 60 510 NA NA Included Biliary-AdenoCA LIRI JP 1 16.78 LIRI-JP::RK210 1 184464479 184542379 1 1 38 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 31.1 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 2 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 3 15200496 148990297 1 2 38 0 2 0 0 0 0.11 0.34 2 0 0 NA NA NA NA NA NA 31.1 39.67 60.3 0 2 3 Whitelist LIRI-JP 0.54 0.59 0 0 0.48 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 4 75706257 139331008 1 3 38 1 0 1 1 0 0.8 0.74 3 0 0 NA NA NA NA NA NA 31.1 0.04 99.94 0 2 1 Whitelist LIRI-JP 0.87 0.91 0 0 0.84 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 6 0.08 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 5 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 6 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 7 33072950 114281473 1 3 38 3 0 0 0 0 0.03 0.15 1 0 0 NA NA NA NA NA NA 31.1 99.8 0 0 3 NA Whitelist LIRI-JP 0.41 0.34 0 0 0.33 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 6 0.08 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 8 51286935 126138399 1 3 38 3 0 0 0 0 0.03 0.04 3 0 0 NA NA NA NA NA NA 31.1 0.06 99.94 0 2 1 Whitelist LIRI-JP 0.41 0.14 0 0 0.33 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 6 0.08 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 9 21779243 22120491 2 2 38 1 0 1 0 0 0.57 0.19 1 0 0 NA NA NA NA NA NA 31.1 0 99.32 0 2 NA Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 10 NA NA 0 0 38 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 11 NA NA 0 0 38 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 12 123050979 123113543 1 1 38 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA 4 4 4 31.1 51.84 48.08 0 2 NA Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 13 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 14 NA NA 0 0 38 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 15 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 16 55535030 55904954 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 31.1 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 17 53424543 53435454 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.1 0.01 99.97 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 18 20147146 26499031 1 2 38 2 0 0 0 0 0.11 0.27 2 NA 0 NA NA NA NA NA NA 31.1 0.13 99.86 0 1 2 Whitelist LIRI-JP 0.54 0.51 NA 0 0.48 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 19 NA NA 0 0 38 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK210 X NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK210 LIRI 0.56 2.23 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48742 RK210 male alive C22 76 600 NA NA Included Liver-HCC LIRI JP 1 19.74 LIRI-JP::RK211 1 21930164 34131783 55 55 227 15 18 10 12 0 0.44 0 21 0 0 21 5 13 64 13 35 36.4 50.93 49.07 0 2 3 Whitelist LIRI-JP 0.68 0 0 0 0.64 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 110 0.24 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 2 3384629 198141778 3 7 227 2 1 0 0 4 0.3 0.81 9 0 0 9 5 9 9 5 5 36.4 0.2 99.7 0 2 1 Whitelist LIRI-JP 0.68 0.96 0 0 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 10 0.02 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 3 4294765 186345749 1 13 227 1 8 1 0 3 0 0.79 22 0 0 22 14 22 23 15 15 36.4 1.33 98.55 0 2 3 Whitelist LIRI-JP 2 0.41 0.95 0 0 0.05 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 23 0.05 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 4 20275834 163873074 1 13 227 1 4 1 1 6 0.28 0.89 13 0 0 13 8 13 14 8 8 36.4 66.55 33.22 0 2 1 Whitelist LIRI-JP 10_11 0.68 1 0 0 0.59 1 Linked to high confidence LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC Canonical without polyploidization 20 0.04 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 5 59452891 148995964 1 2 227 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 4 3 3 36.4 40.15 59.72 1 1 2 Whitelist LIRI-JP 0.54 0 0 0 0.48 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 6 12107122 56348034 1 3 227 1 2 0 0 0 0.3 0.01 4 0.03 0 4 3 4 6 3 3 36.4 47.09 52.77 0 2 1 Whitelist LIRI-JP 0.62 0.05 0.03 0 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 7 10015747 159088612 1 12 227 1 6 0 1 4 0.01 0.56 20 0 0 20 8 20 21 8 8 36.4 3.24 96.71 0 2 3 Whitelist LIRI-JP 2 0.25 0.78 0 0 0.21 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 20 0.04 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 8 109423423 121345901 1 2 227 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 7 5 5 36.4 96.58 0 0 4 5 Whitelist LIRI-JP 0.54 0.03 NA 0 0.48 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 9 4597819 132675510 1 12 227 1 7 0 2 2 0.01 0.06 27 0 0 27 8 8 28 8 8 36.4 50.85 48.45 3 2 1 Whitelist LIRI-JP 0.21 0.18 0 0 0.19 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 22 0.05 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 10 85728073 113319897 5 9 227 2 1 1 1 4 0.9 0.15 13 0 0 13 12 13 20 12 12 36.4 19.81 80 0 2 3 Whitelist LIRI-JP 4 0.97 0.35 0 0 0.92 1 High confidence LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC Canonical without polyploidization 14 0.03 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 11 608141 131210226 1 9 227 1 6 0 0 2 0 0.87 17 0 0 17 11 17 19 11 11 36.4 14.99 84.46 0 2 3 Whitelist LIRI-JP 4 0.48 1 0 0 0.09 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 16 0.04 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 12 9969409 96771043 1 6 227 0 6 0 0 0 0 0.21 12 0 0 12 11 12 13 11 13 36.4 1.96 97.96 2 2 3 Whitelist LIRI-JP 0.04 0.43 0 0 0.03 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 12 0.03 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 13 54257881 54270551 1 1 227 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 36.4 99.99 0.01 0 1 2 Whitelist LIRI-JP 0.62 0.03 NA NA 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 14 35269953 104804688 1 8 227 1 6 0 1 0 0.01 0.25 10 0 0 10 10 10 11 11 11 36.4 0.87 98.22 0 2 3 Whitelist LIRI-JP 0.28 0.49 0 0 0.21 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 16 0.04 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 15 51499432 90044037 1 7 227 0 7 0 0 0 0 0.69 12 0 0 12 12 12 14 13 13 36.4 2.95 96.88 0 2 3 Whitelist LIRI-JP 0.02 0.89 0 0 0.01 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 14 0.03 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 16 NA NA 0 0 227 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 17 79315014 79483004 2 2 227 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 17 5 9 36.4 42.82 52.3 0 2 3 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 18 19479008 60730891 1 2 227 0 2 0 0 0 0.11 0.3 4 0 0 4 4 4 8 6 7 36.4 10.85 83.81 0 2 3 Whitelist LIRI-JP 0.54 0.55 0 0 0.48 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 19 33557693 37472887 1 1 227 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 4 4 36.4 37.55 62.01 0 2 3 Whitelist LIRI-JP 0.62 0.34 NA NA 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 20 39799430 62801201 1 3 227 0 3 0 0 0 0.03 1 4 0 0 4 4 4 6 6 6 36.4 2.26 97.33 0 2 3 Whitelist LIRI-JP 0.41 1 0 0 0.33 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 6 0.01 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 21 NA NA 0 0 227 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 22 45797150 45812998 1 1 227 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 4 4 36.4 36.46 63.54 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK211 X 36628449 39546672 1 1 227 0 1 0 0 0 0.39 0.05 2 0 NA NA NA NA 5 5 5 36.4 96.27 3.5 0 1 2 Whitelist LIRI-JP 0.62 0.16 0 NA 0.59 1 No LIRI-JP RK211 LIRI 0.84 1.82 Liver-HCC NA 2 0 NA 2 LIRI-JP DO48743 RK211 female alive C22 69 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK213 1 NA NA 0 0 7 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 4 NA NA 0 0 7 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 7 NA NA 0 0 7 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 12 100142774 100670626 1 1 7 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 5 4 5 35.88 1.52 94.74 0 1 2 Whitelist LIRI-JP 0.62 0.53 NA NA 0.59 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 2 0.14 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 13 NA NA 0 0 7 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 15 NA NA 0 0 7 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.4 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 18 NA NA 0 0 7 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.39 NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK213 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK213 LIRI 0.22 1.71 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48747 RK213 male alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK214 1 27085354 27196505 1 1 43 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 14.26 38.7 58.33 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 2 80335167 204808321 1 3 43 2 1 0 0 0 0.3 1 4 0 0 4 3 4 5 3 3 14.26 0.35 99.56 0 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 6 0.07 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 3 52687924 62071999 1 2 43 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 14.26 0 99.86 0 2 NA Whitelist LIRI-JP 0.54 0.93 NA 0 0.48 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 4 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 5 93059599 93415599 1 1 43 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 14.26 0.2 99.68 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 6 45176973 136943515 1 2 43 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 14.26 0.09 99.76 0 2 1 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 7 37278323 37473346 1 1 43 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 14.26 0.12 99.64 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 8 101386706 101666224 1 4 43 0 0 1 0 3 0.39 0 2 0 0 NA NA NA 5 0 3 14.26 96.58 0 0 4 5 Whitelist LIRI-JP 0.54 0 0 0 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 5 0.06 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 10 103645023 103724752 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 14.26 0 99.81 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 11 134846151 134862948 1 1 43 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 14.26 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 12 24691677 24749370 1 1 43 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 14.26 0.04 99.87 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 13 73434413 73585150 1 1 43 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA NA NA NA 14.26 0.13 99.87 0 1 2 Whitelist LIRI-JP 0.62 0.19 0 NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 14 103618308 103854457 2 8 43 0 1 1 0 6 0.57 0 3 0 0 NA NA NA 4 0 3 14.26 0.24 98.84 0 2 3 Whitelist LIRI-JP 0.62 0 0 0 0.64 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 10 0.12 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 17 5363418 21101598 10 10 43 2 3 2 3 0 0.94 0 6 0 0 6 6 6 7 7 7 14.26 18.28 81.67 1 1 2 Whitelist LIRI-JP 0.96 0 0 0 0.96 0 Low confidence LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC Canonical without polyploidization 20 0.23 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 18 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 19 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 22 18016537 18223020 1 1 43 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 14.26 0.4 99.6 0 1 2 Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK214 X 111252896 111270107 1 1 43 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.26 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK214 LIRI 0.93 1.96 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO48751 RK214 male deceased C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK215 1 173205006 186568691 1 2 22 0 2 0 0 0 0.11 0.25 4 0 0 4 3 4 7 3 5 22.21 96.66 0.34 0 3 5 Whitelist LIRI-JP 0.54 0.49 0 0 0.48 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 2 80775875 126131898 1 2 22 0 1 1 0 0 0.57 0.71 2 NA 0 NA NA NA NA NA NA 22.21 81.25 18.65 0 1 2 Whitelist LIRI-JP 0.68 0.9 NA 0 0.64 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 3 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 4 34041065 92812928 1 2 22 0 2 0 0 0 0.11 0.18 3 0 0 NA NA NA NA NA NA 22.21 0.05 99.94 0 2 3 Whitelist LIRI-JP 0.54 0.4 0 0 0.48 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 5 45969748 116790157 1 2 22 1 1 0 0 0 0.57 0.65 5 NA 0 5 3 4 8 3 3 22.21 48.37 48.92 0 4 0 Whitelist LIRI-JP 0.68 0.86 NA 0 0.64 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 6 65973028 100512792 1 2 22 0 2 0 0 0 0.11 0.38 2 NA 0 NA NA NA NA NA NA 22.21 0.31 99.44 0 2 3 Whitelist LIRI-JP 0.54 0.63 NA 0 0.48 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 7 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 8 7222898 12285834 1 1 22 0 0 0 1 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 22.21 0.51 99.48 0 2 4 Whitelist LIRI-JP 0.62 0.56 NA NA 0.59 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 9 101312780 101379165 1 1 22 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 22.21 0.05 99.31 0 2 4 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 11 4985538 84817022 1 2 22 0 2 0 0 0 0.11 0.27 1 NA 0.04 NA NA NA NA NA NA 22.21 0 99.44 0 2 NA Whitelist LIRI-JP 0.54 0.52 NA 0.04 0.48 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 4 0.09 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 12 10256031 10296723 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.21 0.03 99.89 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 13 84342832 84984867 1 1 22 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 22.21 0.56 85.29 0 2 3 Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK215 X 115400558 115665283 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.21 99.83 0.17 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK215 LIRI 0.28 1.99 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48753 RK215 male alive C22 55 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK216 1 1867243 4774290 1 1 38 0 0 0 1 0 0.39 0.22 2 0.03 NA NA NA NA 7 4 6 83.23 98.32 1.68 0 2 4 Whitelist LIRI-JP 0.62 0.45 0.03 NA 0.59 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 2 135552190 168720632 1 2 38 1 1 0 0 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 83.23 99.89 0 0 4 6 Whitelist LIRI-JP 0.68 0.93 NA 0 0.64 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 3 17215332 17358814 1 1 38 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 83.23 99.86 0 0 3 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 4 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 5 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 6 83300969 85953894 1 1 38 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 83.23 99.85 0 0 3 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 9 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 10 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 11 94543805 123946518 14 23 38 4 1 5 4 9 0.46 0 10 0 0 10 6 10 13 6 13 83.23 84.23 15.34 1 2 4 Whitelist LIRI-JP 0.79 0 0 0 0.64 0 Low confidence LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC Before polyploidization 37 0.49 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 12 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 13 60305206 60352315 1 1 38 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 83.23 100 0 0 3 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 16 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 18 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 20 NA NA 0 0 38 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK216 X NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK216 LIRI 0.84 3.4 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48757 RK216 female alive C22 68 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK217 1 107773070 116931866 3 4 44 2 0 0 1 1 0.3 0 4 0 0 4 4 4 12 7 7 44.71 45.09 51.95 0 1 2 Whitelist LIRI-JP 0.68 0 0 0 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 7 0.08 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 2 122697006 122707213 1 1 44 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 44.71 0 99.89 0 1 2 Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 3 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 4 NA NA 0 0 44 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 5 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 6 2765669 66192793 6 7 44 2 0 2 2 1 0.57 0 9 0 0 9 4 8 12 4 4 44.71 97.05 0 0 7 8 Whitelist LIRI-JP 0.68 0.01 0 0 0.64 0 Low confidence LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC With other complex events 13 0.15 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 8 26395911 49720333 1 8 44 2 1 0 1 4 0.57 0 10 0 0 10 3 3 11 4 4 44.71 95.37 1.11 0 1 6 Whitelist LIRI-JP 0.68 0.01 0 0 0.64 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 12 0.14 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 9 89539913 89570969 1 1 44 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA NA NA NA 44.71 99.96 0 0 1 3 Whitelist LIRI-JP 0.62 0.11 0 NA 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 11 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 12 11746397 11895346 1 1 44 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 4 4 44.71 70.41 25.85 0 2 3 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 16 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 18 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 19 NA NA 0 0 44 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 21 18851313 39712213 6 7 44 3 2 0 1 1 0.34 0 2 0 0 NA NA NA NA NA NA 44.71 43.44 25.2 0 1 2 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 13 0.15 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 22 46696060 46714176 1 1 44 0 0 1 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 4 44.71 88.85 0.04 0 1 2 Whitelist LIRI-JP 0.62 0.07 NA NA 0.59 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 2 0.02 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK217 X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK217 LIRI 0.46 1.7 Liver-HCC NA 0 0 NA 1 LIRI-JP DO48759 RK217 male alive C22 73 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK219 1 10107761 245967448 1 3 19 1 1 0 1 0 0.8 0.06 5 0 0 5 3 5 8 3 5 5.57 51.89 45.06 0 2 3 Whitelist LIRI-JP 0.87 0.18 0 0 0.84 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 6 0.16 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 2 208827665 208945889 1 1 19 0 1 0 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 5.57 0.05 99.84 0 2 3 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 3 NA NA 0 0 19 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 4 7229564 92890433 1 2 19 1 1 0 0 0 0.57 0.37 2 NA 0 NA NA NA NA NA NA 5.57 0.07 99.73 0 2 3 Whitelist LIRI-JP 0.68 0.62 NA 0 0.64 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 5 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 7 111801889 111944726 1 1 19 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.57 0.09 99.69 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 9 21973592 22026271 1 1 19 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 5.57 0 99.29 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 13 99094834 99396468 1 1 19 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA 4 3 3 5.57 14.41 82.81 0 2 3 Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 14 38386808 38407778 1 1 19 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 5.57 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 15 NA NA 0 0 19 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 16 78355639 78377583 1 1 19 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 5.57 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 18 NA NA 0 0 19 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 19 14130982 14169094 1 1 19 0 1 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 5.57 0 92.67 0 2 NA Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK219 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK219 LIRI 0.87 2.03 Liver-HCC NA 0 0 NA 2 LIRI-JP DO48760 RK219 female alive C22 70 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK220 1 153880722 153962534 1 1 24 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 10.49 11.89 88.1 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 2 117683743 119625607 1 2 24 1 0 0 1 0 0.57 1 2 NA 0 NA NA NA NA NA NA 10.49 0.02 99.88 0 1 2 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 4 0.08 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 3 67101874 107466535 1 2 24 2 0 0 0 0 0.11 0.68 4 NA 0 4 4 4 5 5 5 10.49 0.15 99.73 0 1 2 Whitelist LIRI-JP 0.54 0.88 NA 0 0.48 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 4 0.08 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 4 26440762 88019351 1 2 24 2 0 0 0 0 0.11 0.21 4 0 0 4 4 4 5 5 5 10.49 0.03 99.76 0 1 2 Whitelist LIRI-JP 0.54 0.44 0 0 0.48 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 4 0.08 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 5 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 6 2063871 146245378 1 3 24 2 1 0 0 0 0.3 0.17 4 0.03 0.01 4 3 4 5 3 3 10.49 0.12 99.7 0 2 1 Whitelist LIRI-JP 0.62 0.39 0.03 0.01 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 6 0.12 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 8 114541887 114561766 1 1 24 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.49 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 9 21988356 22054805 1 1 24 1 0 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 10.49 0 99.3 0 2 NA Whitelist LIRI-JP 0.62 0.83 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 11 69448926 69643007 3 3 24 0 1 1 1 0 0.8 0.1 6 0 0 6 0 4 7 0 0 10.49 0.14 99.42 0 2 3 Whitelist LIRI-JP 0.87 0.26 0 0 0.84 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 6 0.12 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 12 20201920 42889653 1 1 24 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.49 82.97 16.95 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 13 22504652 54326524 1 1 24 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 10.49 27.63 72.37 0 1 2 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 14 32790466 33092693 1 1 24 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 10.49 0.28 98.8 0 1 2 Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 16 11637794 11752778 1 1 24 0 1 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 10.49 0.13 99.78 0 2 3 Whitelist LIRI-JP 0.62 0.72 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 19 10959758 11190145 1 1 24 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 10.49 0.39 99.44 0 2 3 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 20 25672270 25733634 1 1 24 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 10.49 0 99.71 0 2 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 2 0.04 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK220 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK220 LIRI 0.71 1.93 Liver-HCC NA 0 0 NA 3 LIRI-JP DO48761 RK220 male alive C22 55 870 NA NA Included Liver-HCC LIRI JP 1 28.62 LIRI-JP::RK221 1 232050387 232066414 1 1 14 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA 5 3 3 34.68 90.86 6.17 0 3 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 2 0.07 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 2 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 3 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 4 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 9 21866581 22094320 1 1 14 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 34.68 99.36 0 0 0 1 Whitelist LIRI-JP 0.62 0.27 NA NA 0.59 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 2 0.07 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 10 2844120 38313309 5 5 14 0 1 2 2 0 0.53 0 7 0.06 0 7 7 7 7 7 7 34.68 2.25 94.3 0 2 1 Whitelist LIRI-JP 0.68 0 0.06 0 0.64 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 10 0.36 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 17 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 18 37196646 37307905 1 1 14 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 4 3 4 34.68 99.84 0.14 0 2 3 Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 2 0.07 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 20 NA NA 0 0 14 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK221 X 19318770 20684172 1 1 14 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 34.68 100 0 0 0 1 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK221 LIRI 0.33 1.8 Liver-HCC NA 2 0.07 NA 2 LIRI-JP DO50772 RK221 male alive C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK222 1 2549590 41394004 1 4 20 1 2 0 0 1 0.3 0.07 7 0.01 0 7 6 7 8 6 8 8.34 4.43 95.57 0 2 3 Whitelist LIRI-JP 0.68 0.2 0.01 0 0.59 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 7 0.18 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 2 206400502 206492774 1 1 20 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 8.34 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 2 0.05 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 4 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 5 1295601 67466723 2 2 20 0 0 1 1 0 0.57 0.13 1 0 0.04 NA NA NA NA NA NA 8.34 0.06 99.8 0 2 NA Whitelist LIRI-JP 0.68 0.32 0 0.04 0.64 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 4 0.1 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 9 21922533 90301872 1 3 20 1 0 1 1 0 0.8 0.01 5 0 0 5 3 3 5 3 3 8.34 23.65 76.17 0 1 2 Whitelist LIRI-JP 0.87 0.03 0 0 0.84 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 6 0.15 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 10 77486867 77508641 1 1 20 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA 6 3 3 8.34 68.54 28.01 0 0 1 Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 2 0.05 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 12 4965954 19856909 4 4 20 1 1 1 1 0 1 0 4 0.16 0 4 4 4 6 6 6 8.34 8 91.92 0 1 2 Whitelist LIRI-JP 1 0.01 0.16 0 1 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 8 0.2 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 17 73957279 74654939 1 1 20 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA 4 4 4 8.34 28.19 67.37 0 1 2 Whitelist LIRI-JP 0.62 0.67 NA NA 0.59 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 2 0.05 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK222 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK222 LIRI 0.5 1.92 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579350_C_A,CN:1 2 LIRI-JP DO50774 RK222 female alive C22 68 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK223 1 179784939 242794670 1 2 37 0 1 0 1 0 0.57 0.07 3 0 0 NA NA NA 6 5 5 21.25 75.08 21.94 3 3 2 Whitelist LIRI-JP 0.68 0.2 0 0 0.64 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 2 227962049 228036422 1 1 37 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 21.25 0.03 99.86 0 1 2 Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 3 123016223 153632367 2 2 37 1 0 1 0 0 0.57 0.18 1 0 0 NA NA NA NA NA NA 21.25 0 99.97 0 2 NA Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 4 23886564 129651686 1 2 37 2 0 0 0 0 0.11 0.03 4 0 0 4 4 4 5 5 5 21.25 31.95 67.82 0 1 2 Whitelist LIRI-JP 0.54 0.12 0 0 0.48 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 5 42458213 42615778 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.25 0 99.86 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 6 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 7 110301441 110328616 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.25 0.1 99.68 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 8 42820443 42831072 1 1 37 0 0 0 1 0 0.39 0.44 2 0 NA NA NA NA 6 4 4 21.25 50 50 0 1 2 Whitelist LIRI-JP 0.62 0.68 0 NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 10 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 11 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 12 NA NA 0 0 37 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 13 19555509 64957219 1 1 37 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 21.25 39.42 46.43 0 1 2 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 16 75218242 75279498 1 1 37 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.25 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 17 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 18 67563863 67902685 1 1 37 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 21.25 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 19 NA NA 0 0 37 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 20 43056786 43109578 1 1 37 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 21.25 0 99.02 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 21 38789093 38882856 1 1 37 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 21.25 7.74 70.09 0 1 2 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK223 X NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK223 LIRI 0.51 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50776 RK223 male alive C22 75 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK224 1 NA NA 0 0 138 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 2 104823560 105306782 1 1 138 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 75.37 60.1 37.2 0 3 4 Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 3 116446465 116548133 1 1 138 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA NA NA NA 75.37 99.97 0 0 3 4 Whitelist LIRI-JP 0.62 0.2 0 NA 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 4 NA NA 0 0 138 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.1 NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 5 56427433 179390593 13 22 138 3 3 5 2 9 0.69 0 30 0 0 30 8 8 31 8 8 75.37 99.14 0.73 0 4 3 Whitelist LIRI-JP 0.68 0 0 0 0.77 1 High confidence LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC With other complex events 35 0.13 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 6 90149372 136906996 23 57 138 7 7 4 5 34 0.76 0 70 0 0 70 3 7 82 3 7 75.37 73.8 26.04 0 15 16 Whitelist LIRI-JP 0.62 0 0 0 0.84 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 80 0.29 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 7 25944702 95598378 1 2 138 0 2 0 0 0 0.11 1 9 0 0 9 3 3 15 5 5 75.37 97.42 0 0 5 6 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 8 58233490 78077286 2 20 138 2 0 2 0 16 0.26 0 19 0 0 19 0 4 41 3 4 75.37 89.61 6.96 0 16 5 Whitelist LIRI-JP 0.45 0 0 0 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 24 0.09 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 9 86712647 86768003 1 1 138 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 4 75.37 0.04 96.85 0 1 2 Whitelist LIRI-JP 0.62 0.16 NA NA 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 10 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 11 121994595 122083507 1 1 138 0 0 0 1 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 75.37 89.33 7.05 0 3 NA Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 12 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 13 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 14 NA NA 0 0 138 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 15 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 16 NA NA 0 0 138 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.52 NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 17 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 18 3402814 11557680 1 5 138 1 0 0 0 4 0.39 0 4 0 0 4 3 4 9 4 5 75.37 99.99 0 0 4 3 Whitelist LIRI-JP 5 0.68 0.01 0 0 0.59 1 Linked to high confidence LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC After polyploidization 6 0.02 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 19 41454950 55463413 1 2 138 0 0 1 1 0 0.57 0.35 3 0.01 0 NA NA NA 7 4 4 75.37 52.82 39.9 0 4 5 Whitelist LIRI-JP 0.68 0.61 0.01 0 0.64 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 4 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 20 14198986 14780652 1 2 138 0 0 1 0 1 0.39 0.77 1 NA NA NA NA NA NA NA NA 75.37 99.02 0 0 4 NA Whitelist LIRI-JP 0.68 0.93 NA NA 0.59 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 3 0.01 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 21 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 22 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK224 X NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK224 LIRI 0.42 3.24 Liver-HCC NA 0 0 stopgain,17_7578212_A_G,CN:2 3 LIRI-JP DO50778 RK224 male alive C22 60 630 NA NA Included Liver-HCC LIRI JP 1 20.72 LIRI-JP::RK225 1 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 2 142310935 208457869 1 4 41 4 0 0 0 0 0.01 0.39 6 0 0 6 6 6 7 7 7 75.81 94.49 5.4 0 2 4 Whitelist LIRI-JP 0.21 0.64 0 0 0.16 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 8 0.1 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 3 NA NA 0 0 41 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 4 NA NA 0 0 41 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 5 18021687 27281939 1 1 41 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 75.81 99.86 0 0 5 6 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 6 3404464 104800340 1 3 41 2 0 0 0 1 0.11 0.1 9 0 0 9 5 9 11 6 7 75.81 37.09 60.07 0 5 2 Whitelist LIRI-JP 0.62 0.26 0 0 0.48 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 5 0.06 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 7 NA NA 0 0 41 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 8 35837931 43234287 1 1 41 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 4 4 75.81 96.47 0 0 1 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 9 NA NA 0 0 41 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 0 NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 10 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 11 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 12 NA NA 0 0 41 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 0 NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 13 45383342 62921056 1 2 41 2 0 0 0 0 0.11 0.17 4 0 0 4 3 4 5 3 3 75.81 84.86 15.14 0 2 0 Whitelist LIRI-JP 0.54 0.38 0 0 0.48 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 14 26313707 31864796 1 1 41 0 0 1 0 0 0.39 0.37 3 NA NA NA NA NA 6 5 6 75.81 5.32 90.97 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 15 NA NA 0 0 41 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 16 NA NA 0 0 41 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.55 NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 17 80811587 80826526 1 1 41 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 75.81 99.47 0 0 5 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 18 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 19 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 20 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 21 20601775 31569031 1 1 41 0 0 1 0 0 0.39 0.09 2 NA NA NA NA NA 4 4 4 75.81 77.35 0 0 3 4 Whitelist LIRI-JP 0.62 0.25 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 22 39225309 40008785 1 1 41 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 75.81 100 0 0 1 3 Whitelist LIRI-JP 0.62 0.24 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK225 X 84757734 84799928 1 1 41 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 75.81 0.03 99.97 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK225 LIRI 0.74 3.47 Liver-HCC NA 2 0.02 NA 4 LIRI-JP DO50780 RK225 male deceased C22 70 660 NA NA Included Liver-HCC LIRI JP 1 21.71 LIRI-JP::RK226 1 51669186 97550452 1 4 40 1 0 1 0 2 0.57 0.01 5 0 0 5 3 5 6 3 4 13.05 0.03 99.96 0 2 1 Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 6 0.08 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 2 124030314 128909820 2 2 40 1 0 0 1 0 0.57 0.01 4 0 0 4 3 4 11 5 5 13.05 0.57 96.74 2 2 1 Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 3 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 4 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 5 NA NA 0 0 40 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 6 37750563 63104701 2 2 40 1 1 0 0 0 0.57 0.3 1 0 0 NA NA NA NA NA NA 13.05 0.04 99.73 0 2 NA Whitelist LIRI-JP 0.68 0.55 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 7 106698703 107259330 1 1 40 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 13.05 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 8 50834838 72030602 2 2 40 0 1 0 1 0 0.57 0.46 3 0 0 NA NA NA 5 3 3 13.05 0.03 99.85 0 2 3 Whitelist LIRI-JP 0.68 0.7 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 9 21864983 22137507 1 1 40 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 13.05 63.97 33.46 0 2 NA Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 11 31701182 109647721 5 9 40 0 1 2 2 4 0.53 0 7 0 0 7 3 7 8 3 4 13.05 0.03 99.08 0 2 1 Whitelist LIRI-JP 0.85 0 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 14 0.18 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 13 24791624 60933238 2 3 40 0 0 1 1 1 0.57 0 4 0 0 4 3 4 9 6 6 13.05 18.04 67.81 0 2 1 Whitelist LIRI-JP 0.87 0 0 0 0.64 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 5 0.06 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 14 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 16 78546308 78841565 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.05 0.33 99.56 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 2 0.02 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 17 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 18 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 20 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK226 X NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK226 LIRI 0.14 1.86 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45285 RK226 male alive C22 59 480 NA NA Included Biliary-AdenoCA LIRI JP 1 15.79 LIRI-JP::RK227 1 106993678 107111528 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 4 17.87 48.33 48.69 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 2 20597965 20925035 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.87 0.13 99.77 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 4 74288988 156222176 1 2 21 1 1 0 0 0 0.57 0.65 2 NA 0 NA NA NA NA NA NA 17.87 0.05 99.73 2 2 3 Whitelist LIRI-JP 0.68 0.86 NA 0 0.64 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 5 112157482 112249457 1 2 21 2 0 0 0 0 0.11 0.04 1 0.01 0 NA NA NA 5 5 5 17.87 97.31 0 0 3 NA Whitelist LIRI-JP 0.54 0.14 0.01 0 0.48 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 6 34415359 170277048 1 2 21 1 1 0 0 0 0.57 0.36 5 NA 0 5 3 5 7 3 3 17.87 99.74 0 0 1 0 Whitelist LIRI-JP 0.68 0.62 NA 0 0.64 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 4 0.1 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 7 33123807 33165853 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.87 0.03 99.75 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 8 121623893 121642149 1 1 21 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.87 63.11 36.89 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 9 10016098 10067500 1 1 21 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 17.87 0.04 99.26 0 1 2 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 10 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 11 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 12 NA NA 0 0 21 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.21 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 13 NA NA 0 0 21 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 14 NA NA 0 0 21 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.34 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 16 NA NA 0 0 21 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 19 NA NA 0 0 21 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.19 NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 22 36622135 36974406 1 1 21 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 17.87 0.69 99.31 0 2 3 Whitelist LIRI-JP 0.62 0.45 NA NA 0.59 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK227 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK227 LIRI 0.78 2.19 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50783 RK227 male alive C22 62 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK228 1 164185442 187998387 2 2 69 1 0 1 0 0 0.57 0.5 4 0 0 4 3 4 8 3 8 37.73 70.23 26.47 0 1 2 Whitelist LIRI-JP 0.68 0.74 0 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 4 0.03 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 2 49917235 103943472 2 2 69 0 1 1 0 0 0.57 0.52 3 0 0 NA NA NA 5 5 5 37.73 0.08 99.82 0 2 3 Whitelist LIRI-JP 0.68 0.76 0 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 4 0.03 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 3 NA NA 0 0 69 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 4 83732624 106400175 2 2 69 0 1 0 1 0 0.57 0.81 3 0 0 NA NA NA 4 4 4 37.73 22.03 77.87 0 2 1 Whitelist LIRI-JP 0.68 0.95 0 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 4 0.03 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 5 444665 22391989 1 3 69 1 1 0 0 1 0.57 1 6 0.02 0 6 3 4 9 5 5 37.73 0.57 96.77 0 1 2 Whitelist LIRI-JP 0.87 1 0.02 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 5 0.04 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 6 29984252 169469085 3 3 69 2 1 0 0 0 0.3 0 16 0 0 16 7 12 21 7 7 37.73 63.67 36.19 0 2 3 Whitelist LIRI-JP 0.62 0.02 0 0 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 6 0.04 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 7 110316123 152199715 1 2 69 1 1 0 0 0 0.57 1 3 0.01 0 NA NA NA 8 4 6 37.73 12.04 85.37 0 2 3 Whitelist LIRI-JP 0.68 1 0.01 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 4 0.03 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 8 75486510 115144628 1 5 69 1 3 1 0 0 0.28 0.4 3 0 0 NA NA NA 4 0 3 37.73 96.58 0 0 6 7 Whitelist LIRI-JP 0.62 0.65 0 0 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 10 0.07 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 9 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 10 NA NA 0 0 69 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 11 74841827 75398197 1 1 69 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 37.73 0 99.57 0 2 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 12 27896124 34261764 5 5 69 1 1 2 1 0 0.9 0 2 0 0 NA NA NA 10 3 6 37.73 86.99 9.26 0 1 5 Whitelist LIRI-JP 0.93 0.01 0 0 0.92 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 10 0.07 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 13 49719175 82875418 1 3 69 0 2 0 0 1 0.11 0.51 2 NA 0 NA NA NA NA NA NA 37.73 43.47 42.38 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA 0 0.48 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 5 0.04 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 14 20418705 38291132 1 3 69 0 1 2 0 0 0.3 0.17 5 0 0 5 3 4 7 3 4 37.73 81.22 0.08 0 1 2 Whitelist LIRI-JP 0.62 0.39 0 0 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 6 0.04 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 15 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 16 19085842 19126334 1 1 69 0 1 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 37.73 99.99 0 0 1 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 17 NA NA 0 0 69 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 18 13516794 13592803 1 1 69 0 1 0 0 0 0.39 0.71 2 NA NA NA NA NA 4 3 3 37.73 51.85 48.11 0 2 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 2 0.01 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 19 11074643 52750971 1 2 69 1 1 0 0 0 0.57 0.16 4 0.01 0 4 3 4 4 3 4 37.73 92.51 0.21 0 1 2 Whitelist LIRI-JP 0.68 0.36 0.01 0 0.64 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 4 0.03 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 20 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 21 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 22 NA NA 0 0 69 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK228 X NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK228 LIRI 0.83 1.96 Liver-HCC NA 0 0 frameshift_deletion,17_7578398_-_GGGG,CN:1 5 LIRI-JP DO50785 RK228 male deceased C22 37 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK229 1 NA NA 0 0 27 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 2 20151844 120207912 1 2 27 0 2 0 0 0 0.11 0.02 2 0 0 NA NA NA 6 3 4 7.33 0.42 99.47 0 2 3 Whitelist LIRI-JP 0.54 0.09 0 0 0.48 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 3 NA NA 0 0 27 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 4 23733692 69625509 1 2 27 0 2 0 0 0 0.11 0.7 2 NA 0 NA NA NA NA NA NA 7.33 0.68 99.31 0 2 3 Whitelist LIRI-JP 0.54 0.9 NA 0 0.48 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 6 42650726 43834338 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.33 0.69 99.16 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 7 137702634 137770892 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 7.33 0.04 96.96 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 9 109987251 112985690 1 2 27 0 2 0 0 0 0.11 0.29 2 NA 0 NA NA NA NA NA NA 7.33 0.07 99.79 0 2 3 Whitelist LIRI-JP 0.54 0.53 NA 0 0.48 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 11 109634358 110865936 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.33 0.91 98.65 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 15 40612505 45109919 1 3 27 1 2 0 0 0 0.3 0.01 2 0 0 NA NA NA NA NA NA 7.33 1.03 83.43 0 2 4 Whitelist LIRI-JP 0.62 0.03 0 0 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 6 0.11 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 17 8255729 8449734 1 1 27 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 6 3 4 7.33 8.6 91.38 0 2 NA Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 19 2002104 43615810 1 3 27 1 1 0 0 1 0.57 0 3 0 0.01 NA NA NA 5 4 5 7.33 28.2 71.62 0 2 3 Whitelist LIRI-JP 0.87 0 0 0.01 0.64 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 5 0.09 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 20 17611484 17686993 1 1 27 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 0 3 7.33 12.68 80.3 0 3 4 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK229 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK229 LIRI 0.38 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50787 RK229 male alive C22 63 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK230 1 249122158 249222472 1 1 29 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.75 48.72 48.23 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 2 120442752 239327850 1 2 29 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 23.75 0.53 99.35 0 2 1 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 3 124320691 124446384 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 23.75 0.06 99.89 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 4 54452256 55025064 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 4 23.75 98.75 1.06 0 1 3 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 5 19055412 19066200 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.75 0.05 99.83 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 6 85834022 85846916 1 1 29 0 1 0 0 0 0.39 0.69 2 NA NA NA NA NA 4 4 4 23.75 52.89 46.97 0 1 2 Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 7 116426702 116683567 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 23.75 0.5 96.85 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 8 26408264 55186534 1 3 29 0 3 0 0 0 0.03 0.18 6 0 0 6 6 6 7 7 7 23.75 0.34 99.65 0 2 3 Whitelist LIRI-JP 0.41 0.4 0 0 0.33 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 6 0.1 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 9 29334395 29779102 2 2 29 0 0 1 1 0 0.57 0.31 3 NA 0 NA NA NA NA NA NA 23.75 0.07 99.23 0 2 3 Whitelist LIRI-JP 0.68 0.57 NA 0 0.64 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 10 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 11 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 12 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 13 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 14 45518470 45576485 1 1 29 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 23.75 56.68 39.61 0 1 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 16 2126907 85801772 1 2 29 0 2 0 0 0 0.11 0.18 4 NA 0.04 4 4 4 5 5 5 23.75 99.15 0.71 0 1 2 Whitelist LIRI-JP 0.54 0.4 NA 0.04 0.48 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 17 16542674 72008088 1 3 29 0 0 0 2 1 0.11 0.04 10 NA 0 10 6 10 12 6 7 23.75 67.39 32.58 0 2 3 Whitelist LIRI-JP 0.62 0.15 NA 0 0.48 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 5 0.09 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 18 54254931 54435017 1 1 29 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 23.75 99.96 0 0 1 NA Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 20 47616356 47917712 1 1 29 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 23.75 0.48 98.61 0 2 3 Whitelist LIRI-JP 0.62 0.71 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 21 35878676 36067888 1 1 29 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 23.75 0.39 76.96 0 2 3 Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 2 0.03 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK230 X 72490651 149992643 1 2 29 1 1 0 0 0 0.57 0.66 4 NA 0 4 3 4 5 3 3 23.75 0.25 99.52 0 2 1 Whitelist LIRI-JP 0.68 0.86 NA 0 0.64 0 No LIRI-JP RK230 LIRI 0.77 1.79 Liver-HCC NA 4 0.07 nonsynonymous_SNV,17_7579317_C_A,CN:1 2 LIRI-JP DO50789 RK230 female alive C22 73 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK232 1 150054475 224345343 1 6 56 0 4 0 0 2 0.01 0.21 6 0 0 6 4 6 6 4 4 14.93 39.79 60.21 0 3 2 Whitelist LIRI-JP 0.25 0.43 0 0 0.16 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 10 0.09 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 2 206306794 206427560 1 1 56 1 0 0 0 0 0.39 0.63 2 NA NA NA NA NA 7 3 3 14.93 0.56 99.34 0 1 2 Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 3 60308290 194331697 1 2 56 0 2 0 0 0 0.11 1 6 0 0 6 3 6 11 3 5 14.93 0.18 99.68 0 2 3 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 4 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 5 142102114 143302452 1 1 56 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 14.93 0.71 96.62 0 2 3 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 6 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 7 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 8 39357089 42205632 1 1 56 1 0 0 0 0 0.39 0.37 3 NA NA NA NA NA 14 3 3 14.93 99.99 0 0 3 1 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 9 139446510 139771434 1 1 56 0 1 0 0 0 0.39 0.28 2 0 NA NA NA NA 9 5 9 14.93 0.97 98.87 0 2 3 Whitelist LIRI-JP 0.62 0.53 0 NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 10 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 11 101846929 103097110 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 14.93 0.99 98.44 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 12 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 13 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 14 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 15 63165584 64378324 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.93 1.18 98.7 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 16 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 17 20606173 77059952 18 18 56 2 6 4 6 0 0.49 0 25 0 0 25 6 9 28 6 8 14.93 68.17 27.38 0 3 4 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 Low confidence LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC With other complex events 36 0.32 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 18 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 19 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 20 42568341 42616228 1 1 56 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA 6 4 4 14.93 17.04 81.99 0 1 2 Whitelist LIRI-JP 0.62 0.3 NA NA 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 21 NA NA 0 0 56 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.12 NA NA NA 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 22 24652030 24678535 1 1 56 0 1 0 0 0 0.39 0.03 1 0 0 NA NA NA NA NA NA 14.93 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.11 0 0 0.59 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK232 X 29506989 62752296 1 2 56 1 0 1 0 0 0.57 0.37 1 0 0 NA NA NA NA NA NA 14.93 0 99.77 0 2 NA Whitelist LIRI-JP 0.68 0.62 0 0 0.64 0 No LIRI-JP RK232 LIRI 0.61 2.06 Liver-HCC NA 4 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 LIRI-JP DO50791 RK232 female deceased C22 79 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK233 1 23610148 62296861 1 1 40 1 0 0 0 0 0.39 0.37 4 NA NA 4 0 3 5 0 3 23.4 62.04 37.64 0 1 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 2 81137493 81156398 1 1 40 0 0 0 1 0 0.39 0.38 1 0 NA NA NA NA NA NA NA 23.4 0 99.9 0 2 NA Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 3 NA NA 0 0 40 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 4 182116368 182151894 1 1 40 1 0 0 0 0 0.39 0.75 1 NA NA NA NA NA NA NA NA 23.4 0 99.76 0 2 NA Whitelist LIRI-JP 0.62 0.92 NA NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 5 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 6 61888282 104067789 1 2 40 1 0 1 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 23.4 56.41 43.36 0 1 2 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 7 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 8 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 9 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 10 446880 485026 1 1 40 1 0 0 0 0 0.39 0.43 1 0.01 NA NA NA NA NA NA NA 23.4 0.22 99.49 0 2 NA Whitelist LIRI-JP 0.62 0.68 0.01 NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 11 85337027 85772362 1 1 40 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.4 0.16 99.7 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 12 73739168 73751097 1 1 40 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.4 0.04 99.88 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 13 42516832 53223391 7 7 40 2 1 2 2 0 0.93 0 1 0 0 NA NA NA NA NA NA 23.4 0 100 0 2 NA Whitelist LIRI-JP 0.96 0 0 0 0.95 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 14 0.18 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 14 NA NA 0 0 40 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.61 NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 16 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 17 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 18 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 20 NA NA 0 0 40 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.8 NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 0 0 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK233 X 833771 64405856 2 4 40 0 4 0 0 0 0.01 0 1 0 0 NA NA NA NA NA NA 23.4 100 0 0 1 NA Whitelist LIRI-JP 0.21 0.02 0 0 0.16 0 No LIRI-JP RK233 LIRI NA NA Liver-HCC NA 8 0.1 NA 2 LIRI-JP DO50793 RK233 male alive C22 76 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 1 100120376 100384808 1 1 51 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 9 4 4 34.02 88.61 11.39 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 2 16680348 80550996 1 2 51 1 1 0 0 0 0.57 1 2 0.05 0 NA NA NA NA NA NA 34.02 0.16 99.73 0 2 3 Whitelist LIRI-JP 0.68 1 0.05 0 0.64 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 3 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 4 NA NA 0 0 51 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 5 50197727 59449634 1 2 51 2 0 0 0 0 0.11 0.56 1 0 0 NA NA NA NA NA NA 34.02 0.04 99.84 0 2 NA Whitelist LIRI-JP 0.54 0.79 0 0 0.48 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 6 31770733 68391358 1 3 51 2 1 0 0 0 0.3 0.03 6 0 0 6 0 3 8 3 4 34.02 40.11 59.73 0 4 5 Whitelist LIRI-JP 0.62 0.12 0 0 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 7 69807891 70132027 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 34.02 6.6 93.17 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 8 114128186 114149399 1 1 51 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA 5 4 4 34.02 45.52 54.11 0 5 NA Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 9 100723880 100752502 1 1 51 0 0 0 1 0 0.39 0.14 1 NA NA NA NA NA 5 3 5 34.02 71.08 28.21 0 3 NA Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 10 4851297 5249439 1 1 51 0 1 0 0 0 0.39 0.51 2 0.01 NA NA NA NA NA NA NA 34.02 0.29 99.64 0 2 3 Whitelist LIRI-JP 0.62 0.75 0.01 NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 11 66535257 66865137 1 1 51 0 1 0 0 0 0.39 0.09 2 0 NA NA NA NA 8 5 5 34.02 18.7 80.87 0 2 3 Whitelist LIRI-JP 0.62 0.25 0 NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 12 53251862 53772188 1 1 51 0 1 0 0 0 0.39 0.09 2 0.01 NA NA NA NA 7 7 7 34.02 0.95 99.03 0 2 3 Whitelist LIRI-JP 0.62 0.25 0.01 NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 14 22954942 63858712 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 34.02 38.1 60.98 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 15 42437299 42703268 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 34.02 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 16 50352145 50377646 3 3 51 1 2 0 0 0 0.3 0.01 3 0 0 NA NA NA 7 7 7 34.02 80.16 19.75 0 1 2 Whitelist LIRI-JP 0.62 0.05 0 0 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 17 27781788 63359568 1 2 51 0 1 1 0 0 0.57 0.4 5 NA 0 5 5 5 7 7 7 34.02 1.73 98.26 0 2 3 Whitelist LIRI-JP 0.68 0.65 NA 0 0.64 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 20 14586938 14680292 1 1 51 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 34.02 99.01 0 0 3 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK234 X 132832441 133391053 1 1 51 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 34.02 0.36 99.64 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK234 LIRI 0.76 1.99 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50796 RK234 male alive C22 69 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK235 1 29216020 29329356 1 1 41 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 4 4 37.47 49.35 47.29 0 1 2 Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 2 133629568 206417416 1 2 41 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 5 3 3 37.47 0.05 99.84 0 1 2 Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 3 60570033 194223361 1 3 41 3 0 0 0 0 0.03 0.21 3 0 0 NA NA NA 4 3 3 37.47 52.61 44.33 0 1 2 Whitelist LIRI-JP 0.41 0.43 0 0 0.33 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 6 0.07 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 4 33960732 74208766 1 3 41 3 0 0 0 0 0.03 0.75 3 0 0 NA NA NA NA NA NA 37.47 0.09 99.89 0 2 1 Whitelist LIRI-JP 0.41 0.92 0 0 0.33 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 6 0.07 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 5 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 6 40057402 40169096 2 2 41 0 0 1 1 0 0.57 0.74 4 0 0 4 3 4 5 3 5 37.47 99.85 0 0 3 5 Whitelist LIRI-JP 0.68 0.91 0 0 0.64 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 7 119360372 119503453 1 1 41 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37.47 99.79 0 0 5 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 8 51142226 88567973 1 2 41 1 1 0 0 0 0.57 0.46 3 NA 0 NA NA NA 7 3 3 37.47 99.78 0.21 0 3 4 Whitelist LIRI-JP 0.68 0.71 NA 0 0.64 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 9 85956153 96331904 1 2 41 2 0 0 0 0 0.11 0.22 2 NA 0 NA NA NA 4 3 3 37.47 24.74 74.59 0 1 2 Whitelist LIRI-JP 0.54 0.45 NA 0 0.48 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 10 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 11 31459928 31710469 1 1 41 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.47 0.19 99.41 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 12 50688909 112528518 1 2 41 2 0 0 0 0 0.11 0.12 3 0 0 NA NA NA 6 4 4 37.47 9.17 90.75 0 2 1 Whitelist LIRI-JP 0.54 0.31 0 0 0.48 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 13 48937589 107467406 1 2 41 2 0 0 0 0 0.11 0.17 3 NA 0 NA NA NA 4 4 4 37.47 22.5 77.5 0 2 3 Whitelist LIRI-JP 0.54 0.38 NA 0 0.48 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 14 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 15 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 16 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 17 52993347 53007488 1 1 41 1 0 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 37.47 91.78 2.98 0 3 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 18 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 19 1179020 1209212 1 1 41 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 37.47 25.52 74.31 0 1 NA Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 20 NA NA 0 0 41 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 21 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 22 NA NA 0 0 41 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK235 X 10630070 10844807 1 1 41 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 37.47 37.42 59.43 0 1 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK235 LIRI 0.78 2.29 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50798 RK235 male deceased C22 77 30 NA NA Included Liver-HCC LIRI JP 1 0.99 LIRI-JP::RK236 1 26761322 26947334 3 8 148 0 3 0 0 5 0.03 0.02 1 0 0 NA NA NA 9 6 7 16.14 44.73 49.46 0 2 NA Whitelist LIRI-JP 0.62 0.08 0 0 0.33 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 11 0.04 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 2 141611607 142134330 1 5 148 4 0 1 0 0 0.04 0.14 6 0 0 6 3 6 13 4 7 16.14 0.36 99.55 0 1 2 Whitelist LIRI-JP 0.45 0.33 0 0 0.36 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 10 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 3 173505320 174425823 1 1 148 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 16.14 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 4 93516265 132288182 2 2 148 2 0 0 0 0 0.11 0.62 8 0 0 8 4 4 12 4 6 16.14 20.36 79.62 0 1 2 Whitelist LIRI-JP 0.54 0.84 0 0 0.48 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 5 103579371 145638512 1 4 148 2 2 0 0 0 0.26 0.17 1 0 0 NA NA NA NA NA NA 16.14 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.39 0 0 0.59 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 6 NA NA 0 0 148 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 7 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 8 317288 65269814 25 25 148 5 8 7 5 0 0.78 0 20 0 0 20 11 11 30 11 11 16.14 87.8 12.2 0 2 1 Whitelist LIRI-JP 0.87 0 0 0 0.84 1 High confidence LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC With other complex events 50 0.17 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 9 11673943 12044156 2 2 148 2 0 0 0 0 0.11 1 4 0 0 4 0 4 6 4 6 16.14 0.34 98.98 0 2 1 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 10 114805936 114914375 1 1 148 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 16.14 0.12 99.7 0 2 NA Whitelist LIRI-JP 0.62 0.07 NA NA 0.59 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 11 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 12 109691768 109860227 2 10 148 0 2 0 0 8 0.11 0.03 2 0 0 NA NA NA 7 5 7 16.14 0.43 99.48 0 2 4 Whitelist LIRI-JP 0.62 0.11 0 0 0.48 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 12 0.04 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 13 33202181 36267885 5 5 148 2 1 1 1 0 0.9 0 6 0 0 6 6 6 14 14 14 16.14 16.39 66.67 0 1 2 Whitelist LIRI-JP 0.93 0 0 0 0.92 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 10 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 14 38271154 106201024 1 4 148 4 0 0 0 0 0.01 1 8 0 0 8 5 8 9 5 5 16.14 0.68 83.41 0 2 1 Whitelist LIRI-JP 0.21 1 0 0 0.16 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 15 NA NA 0 0 148 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.42 NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 16 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 17 26612392 66246801 16 16 148 4 4 4 4 0 1 0 43 0 0 43 15 34 48 15 15 16.14 53.01 42.55 0 2 3 Whitelist LIRI-JP 1 0 0 0 1 1 High confidence LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC With other complex events 32 0.11 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 18 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 19 11355638 24358038 1 5 148 1 2 1 0 1 0.57 0.07 6 0 0 6 5 6 10 7 10 16.14 80.47 12.25 0 1 2 Whitelist LIRI-JP 0.68 0.21 0 0 0.64 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 9 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 20 15187368 40066332 1 2 148 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA 4 3 3 16.14 10.48 88.55 0 1 2 Whitelist LIRI-JP 0.54 1 NA 0 0.48 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 21 31752486 31853538 1 1 148 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 16.14 0.44 70.29 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 22 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK236 X 54224933 124168286 1 4 148 1 1 2 0 0 0.57 0.26 5 0 0 5 3 5 6 3 3 16.14 34.93 64.84 0 2 0 Whitelist LIRI-JP 0.68 0.5 0 0 0.64 1 No LIRI-JP RK236 LIRI 0.76 2.01 Liver-HCC NA 8 0.03 nonsynonymous_SNV,17_7577580_C_T,CN:1 2 LIRI-JP DO50799 RK236 female alive C22 66 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK237 1 12167222 154761279 29 31 68 7 8 6 8 2 0.94 0 38 0 0 38 7 14 45 7 8 7.54 18.65 78.32 0 4 3 Whitelist LIRI-JP 0.97 0 0 0 0.96 1 High confidence LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC With other complex events 60 0.44 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 2 63968194 64135949 1 1 68 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 7 3 5 7.54 0.16 99.73 0 2 3 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 3 170589636 170781911 1 1 68 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 7 5 7 7.54 0.29 99.68 0 2 3 Whitelist LIRI-JP 0.62 0.25 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 4 77092105 151677872 1 2 68 1 1 0 0 0 0.57 0.33 4 NA 0 4 3 4 7 3 5 7.54 0.22 99.56 0 2 1 Whitelist LIRI-JP 0.68 0.58 NA 0 0.64 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 5 902534 1295992 1 3 68 0 1 0 0 2 0.39 1 2 NA 0 NA NA NA 6 3 4 7.54 0.83 96.51 0 2 3 Whitelist LIRI-JP 0.62 1 NA 0 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 6 139227413 139391583 1 1 68 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 7 3 5 7.54 0.33 99.43 0 2 3 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 7 NA NA 0 0 68 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 9 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 8 26367086 26665138 3 5 68 1 1 0 1 2 0.8 0.02 4 0 0 4 0 3 4 0 3 7.54 0.2 99.79 0 2 3 Whitelist LIRI-JP 0.62 0.09 0 0 0.84 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 8 0.06 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 9 97353925 133027634 1 4 68 0 2 0 0 2 0.11 0.34 6 0 0 6 6 6 7 7 7 7.54 0.37 99.49 0 2 3 Whitelist LIRI-JP 0.54 0.59 0 0 0.48 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 6 0.04 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 10 93173638 104248112 2 2 68 0 0 1 1 0 0.57 1 4 0 0 4 4 4 5 5 5 7.54 0.69 99.12 0 2 3 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 11 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 12 93199031 100733156 1 2 68 0 2 0 0 0 0.11 0.56 2 0 0 NA NA NA NA NA NA 7.54 0.31 99.61 0 2 3 Whitelist LIRI-JP 0.54 0.79 0 0 0.48 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 13 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 14 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 15 59313764 59365688 1 1 68 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.54 0 84.43 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 16 81056669 81234412 1 1 68 0 1 0 0 0 0.39 0.11 2 NA NA NA NA NA 5 3 5 7.54 0.6 99.31 0 2 3 Whitelist LIRI-JP 0.62 0.28 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 17 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 19 NA NA 0 0 68 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 21 27708561 27880319 1 1 68 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA 4 3 3 7.54 9.94 67.89 0 1 2 Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 22 36435740 36500091 1 1 68 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 7.54 0.13 76.1 0 2 3 Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK237 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK237 LIRI 0.49 1.96 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50800 RK237 male alive C22 74 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK241 1 NA NA 0 0 10 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 2 NA NA 0 0 10 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 3 NA NA 0 0 10 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 5 NA NA 0 0 10 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.72 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 6 NA NA 0 0 10 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 8 2097760 40581759 1 2 10 2 0 0 0 0 0.11 0.09 3 NA 0.33 NA NA NA 4 0 3 8.05 0.98 99.02 0 0 1 Whitelist LIRI-JP 0.54 0.25 NA 0.33 0.48 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 4 0.2 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 9 21971755 22029807 1 1 10 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 8.05 0.04 99.25 0 0 2 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 2 0.1 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 12 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 16 79143064 79167201 1 1 10 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 8.05 0.03 99.96 0 2 3 Whitelist LIRI-JP 0.62 0.1 NA NA 0.59 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 2 0.1 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK241 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK241 LIRI 0.78 1.93 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50802 RK241 male alive C22 49 930 NA NA Included Liver-HCC LIRI JP 1 30.59 LIRI-JP::RK243 1 NA NA 0 0 30 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 8 6 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.1 0 NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 2 58250914 142011772 1 3 30 3 0 0 0 0 0.03 0.74 3 0 0 NA NA NA NA NA NA 5.66 0.06 99.84 1 2 1 Whitelist LIRI-JP 0.41 0.91 0 0 0.33 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 6 0.1 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 3 71139545 71412051 1 1 30 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 3 5.66 0.32 99.55 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 4 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 5 12231302 12291278 1 1 30 1 0 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 5.66 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 6 123954356 154355851 5 10 30 3 1 0 1 5 0.28 0 3 0 0 NA NA NA 5 3 3 5.66 2.34 97.51 0 2 3 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 15 0.25 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 7 35609808 85442111 1 3 30 2 1 0 0 0 0.3 0.22 2 0 0 NA NA NA NA NA NA 5.66 0.21 99.59 0 2 4 Whitelist LIRI-JP 0.62 0.45 0 0 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 6 0.1 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 8 48775288 48792672 1 1 30 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 5 5 5 5.66 9.08 90.91 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 9 84215058 84225994 1 1 30 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.66 0 99.36 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 10 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 11 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 12 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 14 24460722 24612007 1 1 30 0 1 0 0 0 0.39 0.62 1 NA NA NA NA NA 4 4 4 5.66 30.13 66.16 0 2 NA Whitelist LIRI-JP 0.62 0.83 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 20 16291794 16382189 1 1 30 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 5.66 0 99.06 0 2 NA Whitelist LIRI-JP 0.62 0.72 NA NA 0.59 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK243 X 108447534 144569955 4 4 30 0 2 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 5.66 0 99.77 0 2 NA Whitelist LIRI-JP 0.68 0.07 0 0 0.64 0 No LIRI-JP RK243 LIRI 0.32 2.02 Liver-HCC NA 8 0.13 NA 2 LIRI-JP DO50803 RK243 female alive C22 62 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK244 1 246015374 246675576 2 2 24 2 0 0 0 0 0.11 0.11 3 0 0 NA NA NA 14 7 7 22.94 46.32 50.66 0 3 2 Whitelist LIRI-JP 0.54 0.3 0 0 0.48 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 2 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 5 74997500 112241967 1 3 24 1 0 1 1 0 0.8 0.06 3 0 0 NA NA NA NA NA NA 22.94 0.25 99.6 0 2 1 Whitelist LIRI-JP 0.87 0.19 0 0 0.84 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 6 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 7 32684990 141356505 1 2 24 2 0 0 0 0 0.11 0.14 10 0 0 10 7 9 11 7 7 22.94 97.34 0 0 4 7 Whitelist LIRI-JP 0.54 0.33 0 0 0.48 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 8 39073265 60041443 1 1 24 0 0 0 1 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 22.94 85.54 14.33 0 2 3 Whitelist LIRI-JP 0.62 0.6 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 9 72148091 72215232 1 1 24 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 22.94 0.05 99.29 0 1 2 Whitelist LIRI-JP 0.62 0.83 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 11 81090403 115236728 1 2 24 2 0 0 0 0 0.11 0.31 4 NA 0 4 4 4 7 5 5 22.94 37.72 58.19 0 1 2 Whitelist LIRI-JP 0.54 0.56 NA 0 0.48 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 13 47960503 47983301 1 1 24 1 0 0 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 22.94 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 14 NA NA 0 0 24 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 15 40855381 41267444 1 1 24 1 0 0 0 0 0.39 0.03 1 0 0 NA NA NA NA NA NA 22.94 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.11 0 0 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 17 3973935 4037143 1 1 24 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 22.94 0 99.95 0 2 NA Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 19 5692309 14558577 1 1 24 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 22.94 14.99 84.83 0 1 2 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 20 21124333 21554753 1 1 24 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 22.94 0.68 98.31 0 1 2 Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK244 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK244 LIRI 0.86 2.12 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50804 RK244 male alive C22 81 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK245 1 150187859 150603756 2 2 48 0 1 0 1 0 0.57 0.79 2 0 0 NA NA NA 4 3 4 14.43 39.77 60.22 0 2 3 Whitelist LIRI-JP 0.68 0.94 0 0 0.64 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 2 231841577 232015268 1 1 48 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 3 3 14.43 0.1 99.8 0 1 2 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 3 59864829 110995234 1 2 48 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 14.43 0.02 99.86 0 2 NA Whitelist LIRI-JP 0.54 1 0 0 0.48 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 4 74260383 155569602 1 3 48 2 1 0 0 0 0.3 1 1 0 0 NA NA NA NA NA NA 14.43 0 99.8 0 2 NA Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 5 NA NA 0 0 48 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 12 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.31 0 NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 6 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 7 NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 8 49162576 50704370 1 2 48 2 0 0 0 0 0.11 0.31 4 0 0 4 0 4 9 4 4 14.43 96.58 0 0 3 4 Whitelist LIRI-JP 0.54 0.56 0 0 0.48 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 9 21904345 131430422 1 3 48 1 1 1 0 0 0.8 0 5 0 0 5 0 3 6 3 3 14.43 0.32 98.98 0 2 4 Whitelist LIRI-JP 0.87 0.01 0 0 0.84 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 6 0.06 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 10 5504998 5916616 2 2 48 0 2 0 0 0 0.11 0.07 4 0 0 4 0 3 4 0 3 14.43 0.3 99.52 0 2 3 Whitelist LIRI-JP 0.54 0.2 0 0 0.48 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 12 48923609 49061087 1 1 48 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 14.43 0.1 99.82 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 13 NA NA 0 0 48 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.23 0 NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 15 76748694 76899593 1 1 48 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 14.43 0 84.46 0 2 NA Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 17 64582802 64720377 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.43 0.17 99.8 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 18 77639534 77650444 1 1 48 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.43 0.16 99.28 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 19 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 21 38874780 38901663 1 1 48 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 14.43 0.06 77.3 0 1 2 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK245 X NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK245 LIRI 0.47 2.16 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50805 RK245 male alive C22 72 690 NA NA Included Liver-HCC LIRI JP 1 22.7 LIRI-JP::RK254 1 56983383 57520185 1 1 168 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 0 0 40.88 46.52 50.19 0 3 5 Whitelist LIRI-JP 0.62 0.01 0 NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 2 72039899 222460581 1 6 168 3 1 1 0 1 0.28 0.02 3 0 0 NA NA NA NA NA NA 40.88 0.02 99.86 0 2 5 Whitelist LIRI-JP 0.62 0.09 0 0 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 11 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 3 60190757 61253400 1 1 168 1 0 0 0 0 0.39 0 2 0.03 NA NA NA NA 8 3 4 40.88 96.85 0 0 4 5 Whitelist LIRI-JP 0.62 0.02 0.03 NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 4 18739130 70676827 13 15 168 3 2 5 3 2 0.69 0.16 13 0 0 13 3 8 13 3 4 40.88 0.65 96.97 0 2 4 Whitelist LIRI-JP 0.73 0.37 0 0 0.77 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 28 0.08 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 5 64758056 134211247 1 4 168 1 1 1 0 1 0.8 0.08 3 0 0 NA NA NA 6 0 0 40.88 51.42 45.91 1 2 3 Whitelist LIRI-JP 0.68 0.23 0 0 0.84 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 7 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 6 64968737 71150540 3 3 168 0 1 1 1 0 0.8 0.02 8 0 0 8 0 3 24 4 4 40.88 24.06 73.08 3 2 3 Whitelist LIRI-JP 0.87 0.08 0 0 0.84 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 6 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 7 58042074 122691771 57 66 168 15 17 12 13 9 0.79 0 79 0 0 79 9 9 80 9 9 40.88 22.52 74.47 6 5 2 Whitelist LIRI-JP 0.68 0 0 0 0.84 1 High confidence LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC With other complex events 123 0.37 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 8 50847400 140103655 7 9 168 2 2 2 1 2 0.93 0 40 0 0 40 3 5 43 3 5 40.88 96.58 0 0 8 3 Whitelist LIRI-JP 0.85 0 0 0 0.95 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 16 0.05 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 9 72129104 72147919 1 1 168 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 7 3 4 40.88 59.73 37.68 0 1 3 Whitelist LIRI-JP 0.62 0.07 NA NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 10 52855589 53328416 2 3 168 1 0 0 1 1 0.57 0.01 6 0 0 6 3 4 23 5 5 40.88 56.32 40.14 0 3 5 Whitelist LIRI-JP 0.62 0.03 0 0 0.64 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 5 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 11 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 12 NA NA 0 0 168 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.03 NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 13 30964814 107851788 1 2 168 1 0 0 1 0 0.57 0.39 6 0 0 6 5 6 9 5 5 40.88 15.59 81.64 0 2 1 Whitelist LIRI-JP 0.68 0.64 0 0 0.64 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 14 69374256 69439585 1 1 168 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 3 40.88 15.06 81.23 0 1 2 Whitelist LIRI-JP 0.62 0.21 NA NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 15 NA NA 0 0 168 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.85 NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 16 358185 399014 1 1 168 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 4 6 40.88 92.55 7.36 0 1 3 Whitelist LIRI-JP 0.62 0.34 NA NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 17 65790978 65802104 1 1 168 1 0 0 0 0 0.39 0.23 2 0 NA NA NA NA 10 4 6 40.88 2.62 92.15 0 2 3 Whitelist LIRI-JP 0.62 0.46 0 NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 18 42552517 42579230 1 1 168 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 40.88 0.04 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 19 NA NA 0 0 168 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 20 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 21 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 22 NA NA 0 0 168 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK254 X NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK254 LIRI 0.45 2.71 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 2 LIRI-JP DO50806 RK254 male alive C22 70 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 1 1119435 15049596 12 12 91 3 4 3 2 0 0.88 0 20 0 0 20 12 15 24 13 13 14.37 4.59 95.41 0 2 1 Whitelist LIRI-JP 0.93 0 0 0 0.91 1 High confidence LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC Canonical without polyploidization 24 0.13 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 2 99204052 176228111 2 2 91 1 0 0 1 0 0.57 1 3 0 0 NA NA NA 9 3 3 14.37 14.56 85.34 0 2 1 Whitelist LIRI-JP 0.68 1 0 0 0.64 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 3 60172737 60227622 1 1 91 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 14.37 0.03 99.83 0 1 2 Whitelist LIRI-JP 0.62 1 0 NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 4 38889985 109368701 1 4 91 1 3 0 0 0 0.11 1 6 0 0 6 4 6 9 5 5 14.37 18.56 81.24 2 2 3 Whitelist LIRI-JP 0.54 1 0 0 0.48 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 8 0.04 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 5 NA NA 0 0 91 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 6 17894107 151021808 1 8 91 1 1 0 1 5 0.8 0.12 9 0 0 9 6 9 10 6 6 14.37 12.61 87.24 0 2 1 Whitelist LIRI-JP 1 0.31 0 0 0.84 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 11 0.06 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 7 151574037 151610675 1 1 91 0 1 0 0 0 0.39 0.49 2 0.09 NA NA NA NA NA NA NA 14.37 0.02 99.75 0 2 3 Whitelist LIRI-JP 0.62 0.74 0.09 NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 8 18945007 19379569 1 1 91 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 14.37 0.3 99.7 0 1 2 Whitelist LIRI-JP 0.62 0.25 NA NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 9 80150396 117176496 1 2 91 0 2 0 0 0 0.11 0.78 4 0 0 4 4 4 5 5 5 14.37 0.33 98.99 0 2 3 Whitelist LIRI-JP 0.54 0.94 0 0 0.48 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 10 94493273 94642443 1 1 91 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 14.37 0.11 99.71 0 2 3 Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 11 10318218 10479961 1 5 91 0 1 0 0 4 0.39 0.04 3 0 0 NA NA NA NA NA NA 14.37 0.12 99.45 0 2 3 Whitelist LIRI-JP 1 0.62 0.14 0 0 0.59 1 Linked to high confidence LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC With other complex events 6 0.03 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 12 NA NA 0 0 91 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.22 0 NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 13 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 14 103570786 103755023 1 1 91 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 14.37 0.17 98.91 0 2 3 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 15 NA NA 0 0 91 0 0 0 0 0 NA 0.32 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 0 NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 16 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 17 27669465 62576041 10 10 91 1 5 2 2 0 0.31 0 18 0 0 18 6 8 22 8 8 14.37 39.57 60.38 2 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 Low confidence LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC With other complex events 20 0.11 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 18 NA NA 0 0 91 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 19 28565715 32327841 8 8 91 2 4 1 1 0 0.39 0 12 0 0 12 5 5 18 5 5 14.37 9.06 83.64 1 20 4 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 Low confidence LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC With other complex events 16 0.09 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 20 49047032 49229468 1 1 91 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.37 0.29 98.74 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 21 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 22 18980016 23235961 1 2 91 1 1 0 0 0 0.57 0.29 2 NA 0 NA NA NA NA NA NA 14.37 0.54 99.46 0 2 3 Whitelist LIRI-JP 0.68 0.54 NA 0 0.64 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK256 X NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK256 LIRI 0.89 1.86 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577587_A_T,CN:1 2 LIRI-JP DO50807 RK256 male alive C22 67 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK257 1 203998785 204732179 1 2 26 0 2 0 0 0 0.11 0.05 3 0 0 NA NA NA 4 4 4 14.67 2.21 97.79 0 2 3 Whitelist LIRI-JP 0.54 0.16 0 0 0.48 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 3 9983747 61251300 1 2 26 1 1 0 0 0 0.57 0.11 1 0.08 0 NA NA NA NA NA NA 14.67 0.22 99.66 0 2 NA Whitelist LIRI-JP 0.68 0.28 0.08 0 0.64 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 6 3813037 3856166 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.67 0.03 99.81 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 8 38032432 38053828 1 1 26 0 0 1 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 14.67 0.3 99.7 0 2 NA Whitelist LIRI-JP 0.62 0.34 NA NA 0.59 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 9 NA NA 0 0 26 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.23 NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 10 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 11 69065448 69671275 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 14.67 0.68 98.92 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 12 131933659 132987123 1 3 26 1 0 0 1 1 0.57 0.12 4 NA 0 4 4 4 7 4 4 14.67 0.95 94.72 0 0 1 Whitelist LIRI-JP 0.87 0.31 NA 0 0.64 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 5 0.1 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 13 NA NA 0 0 26 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 14 NA NA 0 0 26 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.79 NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 15 NA NA 0 0 26 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 17 8325215 80131705 1 5 26 1 3 0 0 1 0.11 0 4 0.01 0 4 4 4 4 4 4 14.67 49.53 50.46 0 1 2 Whitelist LIRI-JP 0.45 0 0.01 0 0.48 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 9 0.17 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 19 14873610 18984717 2 3 26 0 1 0 1 1 0.57 0 3 0 0 NA NA NA 5 4 5 14.67 38.18 61.65 0 3 1 Whitelist LIRI-JP 0.87 0.01 0 0 0.64 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 5 0.1 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK257 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK257 LIRI 0.45 1.85 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50808 RK257 male alive C22 68 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK258 1 203849066 203931350 1 1 61 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 17 5 5 70.5 40.29 51.1 0 3 5 Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 2 35023102 58304580 5 5 61 0 1 2 2 0 0.53 0.35 4 0 0 4 0 4 15 7 7 70.5 99.91 0 0 4 3 Whitelist LIRI-JP 0.68 0.61 0 0 0.64 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 10 0.08 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 3 NA NA 0 0 61 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 10 5 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 4 138429065 182795069 2 2 61 0 0 1 1 0 0.57 0.8 1 0 0 NA NA NA 9 3 5 70.5 70.69 29.09 0 4 NA Whitelist LIRI-JP 0.68 0.95 0 0 0.64 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 5 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 6 98528519 98787026 1 1 61 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 70.5 34.16 62.86 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 7 75418026 75462021 1 1 61 0 1 0 0 0 0.39 0.57 1 0 NA NA NA NA 5 5 5 70.5 99.77 0 0 4 NA Whitelist LIRI-JP 0.62 0.79 0 NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 8 42549731 74012514 1 4 61 2 0 1 0 1 0.3 0.24 6 0 0 6 3 3 6 3 3 70.5 96.04 0.53 0 4 1 Whitelist LIRI-JP 0.68 0.48 0 0 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 7 0.06 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 9 12272263 28192712 2 3 61 0 0 1 1 1 0.57 0.03 8 0 0 8 3 4 9 3 4 70.5 4.72 92.2 0 2 3 Whitelist LIRI-JP 0.87 0.12 0 0 0.64 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 5 0.04 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 10 114798271 130464757 1 2 61 2 0 0 0 0 0.11 0.02 3 0 0 NA NA NA 9 9 9 70.5 64.2 35.62 0 4 2 Whitelist LIRI-JP 0.54 0.09 0 0 0.48 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 11 68734577 84811758 11 11 61 2 4 2 3 0 0.8 0 13 0 0 13 0 4 20 3 6 70.5 96.41 0 0 4 6 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 22 0.18 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 12 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 13 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 14 84937736 85394218 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 9 3 4 70.5 79.58 4.51 0 2 7 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 16 25381674 29992563 1 4 61 0 0 1 1 2 0.57 0 4 0 0 4 0 3 7 0 4 70.5 43.93 55.97 0 3 1 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 6 0.05 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 17 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 18 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 19 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 20 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 22 37205220 37396007 1 1 61 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 70.5 65.11 11.11 0 4 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK258 X 57757042 57942158 1 1 61 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 70.5 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK258 LIRI 0.17 3.23 Liver-HCC NA 2 0.02 nonsynonymous_SNV,17_7578503_T_C,CN:2 4 LIRI-JP DO50809 RK258 male deceased C22 56 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK259 1 26935113 233330650 1 2 45 2 0 0 0 0 0.11 0.58 9 NA 0 9 5 8 11 5 8 27.2 48.97 50.71 0 2 3 Whitelist LIRI-JP 0.54 0.8 NA 0 0.48 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 2 NA NA 0 0 45 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.4 NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 3 31242257 31899594 1 1 45 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 6 3 3 27.2 0.48 99.46 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 4 NA NA 0 0 45 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 5 149933725 151116364 2 4 45 0 2 0 0 2 0.11 0.37 3 NA 0 NA NA NA 8 5 7 27.2 96.88 0.44 0 3 5 Whitelist LIRI-JP 0.54 0.62 NA 0 0.48 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 6 0.07 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 6 63454684 64355420 4 7 45 2 0 0 2 3 0.26 0 4 0 0 4 0 4 7 3 3 27.2 97.05 0 0 1 4 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 11 0.12 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 7 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 8 39449009 43683337 4 9 45 2 1 0 1 5 0.57 0 13 0 0 13 4 5 22 6 6 27.2 96.47 0 0 4 3 Whitelist LIRI-JP 0.97 0 0 0 0.64 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 13 0.14 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 9 21827443 22087132 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.2 0.18 99.71 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 10 24927335 24977712 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.2 0.04 99.88 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 11 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 12 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 13 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 14 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 16 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 17 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 18 52328461 77268592 4 10 45 2 0 3 3 2 0.39 0 12 0 0 12 7 12 13 7 7 27.2 7.54 91.41 0 2 1 Whitelist LIRI-JP 0.86 0 0 0 0.59 1 High confidence LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC With other complex events 18 0.2 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 19 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 20 16843942 18172850 1 2 45 0 0 1 1 0 0.57 0.07 2 0 0 NA NA NA 4 3 3 27.2 6.74 93.16 0 2 3 Whitelist LIRI-JP 0.68 0.21 0 0 0.64 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 21 34952735 38721185 1 1 45 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 27.2 7.83 69.52 0 1 2 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK259 X 96778338 96940202 1 1 45 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 27.2 99.9 0.1 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK259 LIRI 0.95 2.26 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50811 RK259 male alive C22 62 450 NA NA Included Liver-HCC LIRI JP 1 14.8 LIRI-JP::RK260 1 9371251 193941982 1 7 39 2 3 0 0 2 0.14 0.03 10 0 0 10 5 10 11 5 5 9.71 0.52 99.47 0 2 3 Whitelist LIRI-JP 0.54 0.11 0 0 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 12 0.15 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 2 20310529 20483897 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.71 0.07 99.82 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 3 23890067 24097911 2 2 39 1 1 0 0 0 0.57 0.35 2 0 0 NA NA NA NA NA NA 9.71 21.97 77.84 0 2 3 Whitelist LIRI-JP 0.68 0.6 0 0 0.64 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 4 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 5 176009074 176961495 1 1 39 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 5 5 9.71 0.67 99.18 0 2 3 Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 6 162508122 162797048 1 1 39 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 9.71 0 99.85 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 8 85492792 144018065 1 4 39 1 1 0 0 2 0.57 0.14 6 0 0 6 5 6 7 5 5 9.71 0.44 99.56 0 2 3 Whitelist LIRI-JP 1 0.33 0 0 0.64 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 6 0.08 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 9 132951512 133445430 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.71 0.35 98.98 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 10 113484812 114593590 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.71 21.71 78.12 0 1 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 11 72233521 72589350 1 1 39 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 3 5 9.71 0.31 99.13 0 2 3 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 12 69130527 69268674 1 1 39 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 5 5 9.71 0.19 99.73 0 2 4 Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 13 45839952 94980359 1 2 39 1 1 0 0 0 0.57 0.15 4 0 0 4 3 4 6 3 3 9.71 1.88 98.12 0 2 1 Whitelist LIRI-JP 0.68 0.35 0 0 0.64 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 15 41995878 76969701 1 2 39 2 0 0 0 0 0.11 0.29 4 NA 0 4 4 4 5 5 5 9.71 0.27 99.73 0 1 2 Whitelist LIRI-JP 0.54 0.54 NA 0 0.48 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 16 86872522 87771795 2 2 39 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 5 5 5 9.71 1.15 98.74 0 2 3 Whitelist LIRI-JP 0.68 0.02 0 0 0.64 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 17 66125573 66935591 2 2 39 0 2 0 0 0 0.11 0.28 4 NA 0 4 0 3 6 0 0 9.71 49 50.98 0 4 6 Whitelist LIRI-JP 0.54 0.53 NA 0 0.48 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 18 46680467 46877573 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.71 0.25 99.7 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 19 18648924 20663684 1 2 39 1 1 0 0 0 0.57 0.18 3 NA 0 NA NA NA NA NA NA 9.71 0.04 99.79 0 2 1 Whitelist LIRI-JP 0.68 0.4 NA 0 0.64 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 4 0.05 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK260 X 43708920 43881687 1 1 39 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 9.71 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK260 LIRI 0.68 1.99 Liver-HCC NA 2 0.03 NA 4 LIRI-JP DO50813 RK260 male alive C22 56 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 1 25538943 226616837 2 7 66 0 0 1 1 5 0.57 0.02 10 0 0 10 3 4 10 3 4 72.26 99.93 0.07 0 3 5 Whitelist LIRI-JP 0.68 0.07 0 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 9 0.07 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 2 160060553 161638442 3 3 66 2 1 0 0 0 0.3 0.26 1 0 0 NA NA NA 16 14 14 72.26 99.9 0 0 3 NA Whitelist LIRI-JP 0.62 0.51 0 0 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 6 0.05 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 3 59928085 175139744 1 2 66 2 0 0 0 0 0.11 0.33 1 NA 0 NA NA NA NA NA NA 72.26 99.86 0 0 3 NA Whitelist LIRI-JP 0.54 0.58 NA 0 0.48 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 4 0.03 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 4 45820894 60943352 1 2 66 1 0 0 1 0 0.57 0.63 5 NA 0 5 3 3 6 3 4 72.26 65.81 34.01 0 2 3 Whitelist LIRI-JP 0.68 0.84 NA 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 4 0.03 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 5 93222970 93251750 1 1 66 1 0 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 72.26 40.16 59.72 0 2 NA Whitelist LIRI-JP 0.62 0.95 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 6 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 7 99784931 133704928 1 5 66 2 1 1 0 1 0.57 0.02 1 0 0 NA NA NA NA NA NA 72.26 99.97 0 0 3 NA Whitelist LIRI-JP 0.93 0.1 0 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 9 0.07 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 8 6284218 6569085 2 2 66 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA 6 4 5 72.26 67.32 28.73 0 2 NA Whitelist LIRI-JP 0.68 0.16 0 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 4 0.03 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 9 122212091 122926578 1 1 66 1 0 0 0 0 0.39 0.33 1 0 NA NA NA NA 4 3 3 72.26 2.72 97.22 0 2 NA Whitelist LIRI-JP 0.62 0.58 0 NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 10 12227199 12482123 1 2 66 0 1 0 0 1 0.39 1 1 NA NA NA NA NA NA NA NA 72.26 99.91 0.01 0 3 NA Whitelist LIRI-JP 0.68 1 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 3 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 11 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA 40 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 12 6719314 7027406 1 1 66 0 1 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 72.26 99.92 0 0 3 NA Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 13 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA 11 11 11 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 14 67166507 67227723 1 1 66 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA 7 3 3 72.26 10.37 86.84 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 15 47703131 60683127 1 3 66 2 1 0 0 0 0.3 0.11 1 0 0 NA NA NA NA NA NA 72.26 99.83 0 0 3 NA Whitelist LIRI-JP 0.62 0.29 0 0 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 6 0.05 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 16 56895427 79207842 1 2 66 1 0 1 0 0 0.57 0.7 1 NA 0 NA NA NA 7 3 3 72.26 52.86 46.35 0 2 NA Whitelist LIRI-JP 0.68 0.89 NA 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 4 0.03 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 17 18567597 79513315 5 7 66 2 2 0 1 2 0.53 0 3 0 0 NA NA NA NA NA NA 72.26 74.83 25.17 0 2 4 Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 12 0.09 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 18 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 19 20804847 20883016 1 1 66 0 0 1 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 72.26 99.83 0 0 3 NA Whitelist LIRI-JP 0.62 0.34 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 20 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 21 NA NA 0 0 66 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 22 19322246 20946042 1 1 66 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA 4 3 3 72.26 100 0 0 4 NA Whitelist LIRI-JP 0.62 0.4 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK261 X 105007401 105060981 1 1 66 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA 16 6 7 72.26 78.68 18.16 0 4 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK261 LIRI NA NA Liver-HCC NA 2 0.02 NA 3 LIRI-JP DO50814 RK261 male alive C22 83 420 NA NA Included Liver-HCC LIRI JP 1 13.82 LIRI-JP::RK262 1 5685916 217171836 8 9 76 2 1 2 3 1 0.8 0.01 18 0 0 18 11 18 20 12 12 90.58 99.76 0.21 0 3 4 Whitelist LIRI-JP 0.68 0.04 0 0 0.84 1 High confidence LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC After polyploidization 17 0.11 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 2 141645507 141838216 2 2 76 2 0 0 0 0 0.11 0.3 4 0 0 4 0 3 14 3 7 90.58 99.83 0.06 0 1 2 Whitelist LIRI-JP 0.54 0.54 0 0 0.48 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 3 71133504 113669636 1 5 76 2 0 0 1 2 0.3 0.11 5 0 0 5 4 5 11 4 4 90.58 89.76 10.1 0 3 4 Whitelist LIRI-JP 0.62 0.29 0 0 0.59 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 8 0.05 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 4 62771678 117550715 1 2 76 2 0 0 0 0 0.11 0.82 5 0.01 0 5 3 5 13 7 7 90.58 99.93 0.06 0 3 2 Whitelist LIRI-JP 0.54 0.96 0.01 0 0.48 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 5 NA NA 0 0 76 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.25 NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 6 155889012 155909643 1 1 76 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 4 3 3 90.58 99.84 0.01 0 2 3 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 7 741334 146936549 1 7 76 5 0 0 0 2 0 0.02 11 0 0 11 5 11 11 5 11 90.58 99.67 0.11 0 4 3 Whitelist LIRI-JP 9 0.47 0.08 0 0 0.07 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 12 0.08 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 8 51946442 138029502 1 2 76 1 1 0 0 0 0.57 0.8 1 0 0 NA NA NA 4 3 3 90.58 99.99 0 0 3 NA Whitelist LIRI-JP 0.68 0.95 0 0 0.64 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 9 4201268 90209354 1 2 76 2 0 0 0 0 0.11 0.54 4 0.37 0.04 4 4 4 7 5 5 90.58 99.33 0 0 3 4 Whitelist LIRI-JP 0.54 0.77 0.37 0.04 0.48 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 10 NA NA 0 0 76 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 11 9320481 9445616 1 1 76 1 0 0 0 0 0.39 1 2 0.03 NA NA NA NA NA NA NA 90.58 99.57 0 0 3 4 Whitelist LIRI-JP 0.62 1 0.03 NA 0.59 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 12 99144673 100226281 2 2 76 2 0 0 0 0 0.11 0.17 4 0 0 4 3 4 8 4 4 90.58 99.56 0.36 0 3 2 Whitelist LIRI-JP 0.54 0.39 0 0 0.48 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 13 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 14 NA NA 0 0 76 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 15 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 16 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 17 NA NA 0 0 76 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 18 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 19 15602808 18623299 5 5 76 3 0 0 2 0 0.14 0 14 0 0 14 4 4 33 5 5 90.58 59.45 33.27 0 7 11 Whitelist LIRI-JP 0.62 0 0 0 0.59 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 10 0.07 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 20 13821101 13901416 1 1 76 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 90.58 99.03 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 22 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK262 X NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK262 LIRI 0.66 3.46 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 4 LIRI-JP DO50815 RK262 male alive C22 62 150 NA NA Included Liver-HCC LIRI JP 1 4.93 LIRI-JP::RK263 1 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 2 144666912 150032943 1 2 28 0 2 0 0 0 0.11 0.03 1 0 0 NA NA NA NA NA NA 23.79 1.35 98.55 0 2 NA Whitelist LIRI-JP 0.54 0.1 0 0 0.48 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 3 1008389 84617180 1 3 28 0 2 0 0 1 0.11 0.44 5 NA 0.02 5 4 5 6 4 4 23.79 21.44 78.51 0 2 3 Whitelist LIRI-JP 0.62 0.69 NA 0.02 0.48 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 5 0.09 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 4 NA NA 0 0 28 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 5 99555215 99570322 1 1 28 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 23.79 32.56 67.33 0 2 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 6 70240845 70255681 1 1 28 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.79 0 99.76 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 7 86130508 136658907 1 1 28 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 3 5 23.79 97.44 0 0 3 5 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 9 30720321 30744371 1 1 28 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 23.79 6.34 93.52 0 2 NA Whitelist LIRI-JP 0.62 0.26 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 10 NA NA 0 0 28 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 13 49783969 49823761 1 1 28 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA NA NA NA 23.79 0.03 99.97 0 2 3 Whitelist LIRI-JP 0.62 0.84 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 14 21334365 86312151 2 2 28 1 1 0 0 0 0.57 0.06 6 0.06 0 6 5 6 7 5 5 23.79 22.26 76.82 0 2 1 Whitelist LIRI-JP 0.68 0.18 0.06 0 0.64 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 15 NA NA 0 0 28 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 16 NA NA 0 0 28 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 18 NA NA 0 0 28 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 20 6276675 6298693 1 1 28 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 23.79 0.03 99 0 2 3 Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 21 NA NA 0 0 28 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK263 X 114341458 114361961 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 23.79 58.93 41.07 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK263 LIRI 0.73 2.15 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50816 RK263 male alive C22 63 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 1 178487446 178524475 1 1 65 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 8 4 4 16.55 41.93 58.07 0 2 3 Whitelist LIRI-JP 0.62 0.26 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 2 150533588 150557711 1 1 65 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 16.55 0.01 99.89 0 2 3 Whitelist LIRI-JP 0.62 1 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 3 116238726 116274854 1 1 65 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA NA NA NA 16.55 0.02 99.85 0 2 3 Whitelist LIRI-JP 0.62 0.33 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 4 NA NA 0 0 65 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.58 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 5 19718497 73057708 1 2 65 1 1 0 0 0 0.57 1 3 0.23 0 NA NA NA NA NA NA 16.55 0.18 99.69 0 2 3 Whitelist LIRI-JP 0.68 1 0.23 0 0.64 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 6 28927848 170197829 1 2 65 1 0 1 0 0 0.57 0.29 3 0 0 NA NA NA 6 4 4 16.55 85.35 14.51 0 1 2 Whitelist LIRI-JP 0.68 0.53 0 0 0.64 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 4 0.03 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 7 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 8 NA NA 0 0 65 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 9 76678973 76712628 1 1 65 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 16.55 0 99.29 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 10 4658429 4668706 1 1 65 1 0 0 0 0 0.39 1 1 0.45 NA NA NA NA NA NA NA 16.55 0 99.82 0 2 NA Whitelist LIRI-JP 0.62 1 0.45 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 11 118192533 118208952 1 1 65 1 0 0 0 0 0.39 0.55 1 0 NA NA NA NA NA NA NA 16.55 0 99.57 0 2 NA Whitelist LIRI-JP 0.62 0.77 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 12 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 13 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 14 NA NA 0 0 65 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 15 NA NA 0 0 65 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.68 0 NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 16 NA NA 0 0 65 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 17 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 18 66613423 66629158 1 1 65 0 1 0 0 0 0.39 0.25 1 0 NA NA NA NA NA NA NA 16.55 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.49 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 19 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 20 NA NA 0 0 65 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.37 0 NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 21 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 22 40545600 40562033 1 1 65 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 16.55 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.77 NA NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK264 X 114048116 114062672 1 1 65 1 0 0 0 0 0.39 0.38 2 0 NA NA NA NA 4 4 4 16.55 45.1 54.9 0 1 2 Whitelist LIRI-JP 0.62 0.63 0 NA 0.59 0 No LIRI-JP RK264 LIRI 0.86 2.04 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50817 RK264 male alive C22 75 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK265 1 39952127 40020877 1 1 25 0 1 0 0 0 0.39 0.44 2 0 NA NA NA NA 5 3 3 12.38 0.03 99.97 0 2 4 Whitelist LIRI-JP 0.62 0.69 0 NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 2 NA NA 0 0 25 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 3 60803184 197301701 1 2 25 1 1 0 0 0 0.57 0.25 4 0 0 4 3 4 5 3 3 12.38 0.17 99.71 0 2 1 Whitelist LIRI-JP 0.68 0.5 0 0 0.64 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 4 0.08 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 5 172096018 172193119 1 1 25 0 1 0 0 0 0.39 0.67 2 NA NA NA NA NA 5 3 5 12.38 0.42 96.89 0 2 3 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 6 111689630 111931878 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.38 0.14 99.71 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 7 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 8 34943645 61116642 1 1 25 0 0 0 1 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 12.38 82.11 17.88 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 9 21938965 22009951 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.38 0.05 99.23 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 10 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 11 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 12 57262802 57298169 1 1 25 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA 4 3 3 12.38 16.33 83.59 0 2 3 Whitelist LIRI-JP 0.62 0.58 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 17 65270150 65335482 1 1 25 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 12.38 48.08 51.92 0 3 NA Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 18 10747348 10901338 1 1 25 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 12.38 0.2 99.79 0 1 2 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 19 50074989 50131470 1 1 25 0 1 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 12.38 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.64 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 21 47666691 47958068 1 1 25 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 12.38 10.1 67.38 0 1 NA Whitelist LIRI-JP 0.62 0.51 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 22 NA NA 0 0 25 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK265 X 94105373 94131114 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.38 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK265 LIRI 0.75 1.97 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50818 RK265 male alive C22 65 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 1 35245129 58955530 1 4 89 1 3 0 0 0 0.11 0.56 7 0 0 7 3 5 8 4 5 19.29 13.74 86.25 0 2 1 Whitelist LIRI-JP 0.54 0.78 0 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 2 47876577 172118678 1 4 89 2 2 0 0 0 0.26 0.45 6 0 0 6 3 5 8 3 5 19.29 3.81 96.09 0 2 1 Whitelist LIRI-JP 0.62 0.69 0 0 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 3 3311777 6043744 3 3 89 1 0 1 1 0 0.8 0 2 0 0 NA NA NA 12 6 6 19.29 8.35 91.53 0 2 3 Whitelist LIRI-JP 0.87 0.01 0 0 0.84 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 4 22385551 27003056 1 2 89 2 0 0 0 0 0.11 0.13 3 NA 0 NA NA NA 7 4 7 19.29 72.55 25.08 0 2 0 Whitelist LIRI-JP 0.54 0.32 NA 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 5 30774035 152238761 1 3 89 2 1 0 0 0 0.3 0.38 1 0 0 NA NA NA NA NA NA 19.29 17 82.88 0 2 NA Whitelist LIRI-JP 0.62 0.63 0 0 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 6 29988436 85097923 1 4 89 0 4 0 0 0 0.01 0.82 3 0 0 NA NA NA NA NA NA 19.29 0.14 99.61 0 2 5 Whitelist LIRI-JP 0.21 0.96 0 0 0.16 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 7 87188899 87275739 2 2 89 1 1 0 0 0 0.57 0.81 1 0 0 NA NA NA 5 4 4 19.29 20.03 79.75 0 2 NA Whitelist LIRI-JP 0.68 0.96 0 0 0.64 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 8 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 9 36045550 72446837 1 2 89 0 2 0 0 0 0.11 0.59 6 NA 0 6 3 5 8 3 5 19.29 26.58 70.34 0 2 3 Whitelist LIRI-JP 0.54 0.81 NA 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 10 114650383 114885021 3 3 89 2 1 0 0 0 0.3 0.61 2 0 0 NA NA NA 6 4 4 19.29 68.25 31.57 0 0 1 Whitelist LIRI-JP 0.62 0.82 0 0 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 11 47514035 73944409 1 4 89 2 2 0 0 0 0.26 0.61 7 0 0 7 3 4 7 3 3 19.29 45.11 51.42 0 2 1 Whitelist LIRI-JP 0.62 0.82 0 0 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 12 9285513 105693140 1 6 89 4 2 0 0 0 0.06 0.2 10 0 0 10 7 7 10 7 7 19.29 0.41 95.68 1 2 0 Whitelist LIRI-JP 0.54 0.42 0 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 12 0.07 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 13 99546747 100938989 2 2 89 0 2 0 0 0 0.11 0.55 4 0 0 4 3 4 7 4 4 19.29 1.4 83.58 0 3 2 Whitelist LIRI-JP 0.54 0.78 0 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 14 45571355 45631870 1 1 89 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 19.29 0 84.09 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 15 25633283 64561233 1 3 89 1 2 0 0 0 0.3 0.32 6 0 0 6 3 5 7 3 5 19.29 0.45 84.14 0 2 1 Whitelist LIRI-JP 0.62 0.57 0 0 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 6 0.03 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 16 4737796 5033145 4 4 89 1 3 0 0 0 0.11 0 2 0 0 NA NA NA 9 6 6 19.29 74.07 25.91 0 1 2 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 8 0.04 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 17 NA NA 0 0 89 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 18 71117360 71292301 1 2 89 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 19.29 0.15 99.81 0 2 3 Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 19 46874221 47391359 1 1 89 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.29 0.87 98.95 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 20 6984564 37825496 1 2 89 0 2 0 0 0 0.11 0.72 1 NA 0 NA NA NA NA NA NA 19.29 0 98.99 2 2 NA Whitelist LIRI-JP 0.54 0.9 NA 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 4 0.02 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 21 47485963 47666082 1 1 89 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.29 69.41 0.37 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 2 0.01 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 22 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK266 X 7155647 104025883 1 7 89 4 1 1 0 1 0.11 0.09 9 0 0 9 8 9 9 8 9 19.29 17.06 82.72 0 2 1 Whitelist LIRI-JP 0.62 0.25 0 0 0.48 0 No LIRI-JP RK266 LIRI 0.22 1.83 Liver-HCC NA 13 0.07 NA 2 LIRI-JP DO50819 RK266 female alive C22 72 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 4 NA NA 0 0 8 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 5 NA NA 0 0 8 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.65 NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 6 90993204 91026734 1 1 8 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 16.42 0.02 99.73 0 1 2 Whitelist LIRI-JP 0.62 0.64 NA NA 0.59 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 2 0.12 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 11 NA NA 0 0 8 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 12 89647221 89684401 1 1 8 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 16.42 0.03 99.89 0 2 3 Whitelist LIRI-JP 0.62 0.17 NA NA 0.59 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 2 0.12 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 14 NA NA 0 0 8 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.46 NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 17 6670071 8237712 1 1 8 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 16.42 1.93 98.02 0 1 2 Whitelist LIRI-JP 0.62 0.42 NA NA 0.59 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 2 0.12 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 18 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.07 NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK267 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK267 LIRI 0.93 1.94 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577559_C_G,CN:1 2 LIRI-JP DO50820 RK267 female alive C22 77 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 1 203715360 246403450 1 2 19 1 1 0 0 0 0.57 0.18 2 0 0 NA NA NA 4 3 3 13.54 41.79 58.21 0 3 4 Whitelist LIRI-JP 0.68 0.4 0 0 0.64 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 3 61109358 182683609 1 2 19 2 0 0 0 0 0.11 0.39 6 NA 0 6 5 6 9 5 5 13.54 0.11 99.77 0 2 4 Whitelist LIRI-JP 0.54 0.63 NA 0 0.48 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 4 0.11 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 5 84405557 84417376 1 1 19 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.54 0.01 99.86 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 7 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 5 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 9 NA NA 0 0 19 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 10 14485499 27561531 1 1 19 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 13.54 9.65 90.17 0 1 2 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 11 85679518 85755719 1 1 19 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 13.54 0 99.57 0 2 NA Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 17 79950592 80007103 1 1 19 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 13.54 0 99.99 0 2 NA Whitelist LIRI-JP 0.62 0.06 NA NA 0.59 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 20 22822912 23041819 1 1 19 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 13.54 0.35 98.66 0 2 3 Whitelist LIRI-JP 0.62 0.59 NA NA 0.59 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 2 0.05 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 21 NA NA 0 0 19 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.44 NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK268 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK268 LIRI 0.64 2.09 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50822 RK268 male alive C22 66 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK269 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 4 92369828 92411172 1 1 4 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 5.19 0 99.98 0 2 NA Whitelist LIRI-JP 0.62 0.48 NA NA 0.59 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 2 0.25 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 5 84672093 84693153 1 1 4 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 5.19 0.01 99.86 0 0 2 Whitelist LIRI-JP 0.62 0.09 NA NA 0.59 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 2 0.25 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 9 25753080 25781896 1 1 4 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 5.19 0.14 99.22 0 2 NA Whitelist LIRI-JP 0.62 0.35 NA NA 0.59 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 2 0.25 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 14 NA NA 0 0 4 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.3 NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK269 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK269 LIRI 0.16 1.95 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45287 RK269 male alive C22 74 390 NA NA Included Biliary-AdenoCA LIRI JP 1 12.83 LIRI-JP::RK270 1 74211397 74239892 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 92.32 86.78 13.22 0 6 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 2 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 3 187905401 187949440 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 92.32 99.85 0.02 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 4 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 5 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 7 113780813 113860247 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 92.32 99.76 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 8 2100314 30809504 1 2 25 2 0 0 0 0 0.11 0.37 4 NA 0.05 4 3 4 5 3 3 92.32 100 0 0 3 0 Whitelist LIRI-JP 0.54 0.62 NA 0.05 0.48 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 4 0.08 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 9 20402929 24289870 1 2 25 2 0 0 0 0 0.11 0.26 4 NA 0 4 4 4 6 5 5 92.32 99.33 0 0 1 3 Whitelist LIRI-JP 0.54 0.5 NA 0 0.48 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 4 0.08 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 10 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 11 24798911 38908399 1 2 25 0 0 1 1 0 0.57 0.11 1 0.02 0 NA NA NA NA NA NA 92.32 96.25 0 0 4 NA Whitelist LIRI-JP 0.68 0.28 0.02 0 0.64 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 4 0.08 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 12 23683746 23965458 1 1 25 1 0 0 0 0 0.39 0.11 2 0 NA NA NA NA 6 3 3 92.32 96.32 0 0 3 4 Whitelist LIRI-JP 0.62 0.29 0 NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 13 28684244 85189132 1 1 25 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 92.32 50.94 49.06 0 2 5 Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 16 19546613 19660426 1 1 25 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 92.32 99.78 0.13 0 2 4 Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 18 6031027 35125140 1 2 25 0 2 0 0 0 0.11 0.03 2 0 0 NA NA NA NA NA NA 92.32 99.99 0 0 5 7 Whitelist LIRI-JP 0.54 0.11 0 0 0.48 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 4 0.08 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 19 NA NA 0 0 25 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.64 NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 20 32987368 33042959 1 1 25 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 5 3 3 92.32 99.02 0 0 3 6 Whitelist LIRI-JP 0.62 0.27 NA NA 0.59 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 2 0.04 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK270 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK270 LIRI 0.77 4.48 Liver-HCC NA 0 0 NA 4 LIRI-JP DO50825 RK270 male alive C22 70 390 NA NA Included Liver-HCC LIRI JP 1 12.83 LIRI-JP::RK272 1 NA NA 0 0 39 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 2 188589136 228343547 2 2 39 0 0 1 1 0 0.57 0.77 1 NA 0 NA NA NA NA NA NA 17.62 0 99.89 0 2 NA Whitelist LIRI-JP 0.68 0.93 NA 0 0.64 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 3 80310946 176454780 1 5 39 3 2 0 0 0 0.14 0.19 2 0 0 NA NA NA 4 4 4 17.62 42.89 57.07 2 1 2 Whitelist LIRI-JP 0.62 0.41 0 0 0.59 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 10 0.13 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 4 113396716 113433628 1 1 39 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 17.62 0.02 99.97 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 5 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 6 4163377 53548718 1 1 39 0 0 0 1 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 17.62 23.23 76.62 0 2 NA Whitelist LIRI-JP 0.62 0.75 NA NA 0.59 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 8 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 9 NA NA 0 0 39 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 10 53728574 101340132 1 3 39 1 1 0 0 1 0.57 0.03 2 0 0 NA NA NA NA NA NA 17.62 0.02 99.8 0 2 3 Whitelist LIRI-JP 0.87 0.12 0 0 0.64 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 5 0.06 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 11 57296424 78053250 2 6 39 2 4 0 0 0 0.06 0 10 0 0 10 4 6 11 4 4 17.62 48.98 50.59 16 2 1 Whitelist LIRI-JP 0.54 0.01 0 0 0.48 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 12 0.15 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 12 53289325 53382136 1 1 39 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 17.62 44.11 55.81 0 2 NA Whitelist LIRI-JP 0.62 0.68 NA NA 0.59 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 13 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 14 24261773 44916745 2 2 39 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 17.62 19.81 76.49 0 2 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 4 0.05 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 15 NA NA 0 0 39 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.26 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 16 NA NA 0 0 39 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.24 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 17 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 18 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 19 NA NA 0 0 39 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK272 X NA NA 0 0 39 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.69 NA NA NA 0 No LIRI-JP RK272 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45289 RK272 female alive C22 78 360 NA NA Included Biliary-AdenoCA LIRI JP 1 11.84 LIRI-JP::RK275 1 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 2 NA NA 0 0 69 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.11 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 3 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 4 54834351 55237185 1 6 69 0 0 0 2 4 0.11 0.01 4 0 0 4 4 4 9 8 8 34.12 88.79 8.64 1 1 2 Whitelist LIRI-JP 0.54 0.03 0 0 0.48 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 8 0.06 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 5 NA NA 0 0 69 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.95 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 6 NA NA 0 0 69 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 7 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 8 35467995 129669305 4 6 69 0 2 1 1 2 0.57 0 12 0 0 12 12 12 15 13 13 34.12 61.33 38.66 0 1 2 Whitelist LIRI-JP 0.68 0.01 0 0 0.64 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 10 0.07 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 9 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 10 NA NA 0 0 69 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 11 NA NA 0 0 69 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 12 86498848 132672926 10 10 69 3 2 3 2 0 0.94 0 6 0 0 6 6 6 6 6 6 34.12 4.01 95.91 10 1 2 Whitelist LIRI-JP 0.96 0 0 0 0.96 1 Low confidence LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC Canonical without polyploidization 20 0.14 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 13 86378471 99546315 20 20 69 3 6 6 5 0 0.75 0 14 0 0 14 8 8 14 8 8 34.12 98.72 1.28 0 1 2 Whitelist LIRI-JP 0.86 0 0 0 0.83 1 High confidence LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC With other complex events 40 0.29 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 14 NA NA 0 0 69 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 15 26199570 37762934 3 5 69 0 2 0 1 2 0.3 0 1 0 0 NA NA NA 8 8 8 34.12 35.2 60.02 0 1 NA Whitelist LIRI-JP 4 0.68 0 0 0 0.59 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 8 0.06 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 16 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 17 11248376 11343839 1 1 69 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 5 5 5 34.12 15.48 84.5 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 18 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 19 NA NA 0 0 69 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 20 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 21 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 22 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK275 X 87716685 128261444 1 2 69 1 1 0 0 0 0.57 0.59 5 NA 0 5 3 4 6 3 4 34.12 41.88 57.89 0 2 1 Whitelist LIRI-JP 0.68 0.81 NA 0 0.64 1 No LIRI-JP RK275 LIRI 0.64 1.96 Liver-HCC NA 4 0.03 nonsynonymous_SNV,17_7578211_A_C,CN:1 2 LIRI-JP DO50827 RK275 female alive C22 48 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK277 1 98178784 198141953 1 2 45 1 1 0 0 0 0.57 1 20 0 0 20 6 10 23 6 7 37.65 18.74 78.23 0 2 1 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 4 0.04 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 2 28440299 192151702 1 6 45 3 2 0 0 1 0.14 0.1 13 0 0 13 9 9 15 9 9 37.65 0.64 99.24 0 2 3 Whitelist LIRI-JP 0.62 0.26 0 0 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 11 0.12 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 3 104154081 106182614 2 2 45 0 0 1 1 0 0.57 0.13 1 0 0 NA NA NA 8 3 3 37.65 0.48 99.47 0 2 NA Whitelist LIRI-JP 0.68 0.32 0 0 0.64 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 4 0.04 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 4 1833852 32775550 2 2 45 1 0 0 1 0 0.57 1 5 0.07 0.09 5 3 5 10 4 6 37.65 88.15 9.48 0 2 3 Whitelist LIRI-JP 0.68 1 0.07 0.09 0.64 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 4 0.04 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 5 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA 12 5 7 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 6 45788302 47467649 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 13 5 5 37.65 1.39 95.78 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 7 110484002 110906572 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 10 3 5 37.65 0.94 96.44 0 2 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 8 47257269 100269671 1 5 45 3 1 0 0 1 0.11 0.03 9 0 0 9 9 9 13 10 10 37.65 50.45 46.13 0 2 3 Whitelist LIRI-JP 0.62 0.1 0 0 0.48 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 9 0.1 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 9 107637917 107651009 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 10 4 5 37.65 50.74 48.59 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 10 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 11 62616693 62638430 1 1 45 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA 11 3 7 37.65 2.43 94.08 0 2 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 12 47209349 99929113 1 2 45 1 1 0 0 0 0.57 0.47 4 0 0 4 4 4 9 5 5 37.65 96.26 0 0 3 5 Whitelist LIRI-JP 0.68 0.71 0 0 0.64 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 4 0.04 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 13 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 14 56014203 56141761 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 5 37.65 84.09 0 0 0 1 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 15 25909972 26227726 1 1 45 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 37.65 0.31 99.69 0 1 2 Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 16 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 17 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 18 5211503 5223735 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.65 0.02 99.98 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 19 NA NA 0 0 45 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 0 0 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 22 43034224 43134013 1 1 45 0 1 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 37.65 99.81 0.19 0 1 2 Whitelist LIRI-JP 0.62 0.66 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK277 X 7176586 7224084 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37.65 100 0 0 1 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK277 LIRI 0.32 1.71 Liver-HCC NA 2 0.02 stopgain,17_7577579_C_G,CN:1 3 LIRI-JP DO50829 RK277 male alive C22 78 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK278 1 198252273 198275738 1 1 26 0 0 0 1 0 0.39 0.05 2 0 0 NA NA NA 16 3 4 36.1 45.71 51.3 0 3 6 Whitelist LIRI-JP 0.62 0.16 0 0 0.59 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 2 0.04 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 3 46080580 86033778 1 7 26 1 0 0 2 4 0.3 0 6 0 0 6 3 4 11 4 4 36.1 43.84 55.75 0 1 3 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 10 0.19 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 4 NA NA 0 0 26 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 5 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 6 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 8 33657879 52429589 2 7 26 1 1 2 0 3 0.57 0 4 0 0 4 4 4 6 6 6 36.1 33.88 66.12 0 1 2 Whitelist LIRI-JP 0.96 0 0 0 0.64 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 11 0.21 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 11 NA NA 0 0 26 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 13 NA NA 0 0 26 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.81 NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK278 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK278 LIRI 0.43 1.77 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577557_T_A,CN:1 2 LIRI-JP DO50831 RK278 male alive C22 52 510 NA NA Included Liver-HCC LIRI JP 1 16.78 LIRI-JP::RK279 1 30955993 118910093 8 8 35 1 3 2 2 0 0.8 0 15 0 0 15 5 5 19 5 5 37.96 99.11 0.88 4 3 4 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 Low confidence LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA With other complex events 16 0.23 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 2 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 3 1190923 76335380 1 1 35 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 37.96 37.95 61.93 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 4 59587310 69873507 4 4 35 1 1 1 1 0 1 0.08 6 0 0 6 6 6 10 8 10 37.96 63.67 36.1 6 1 2 Whitelist LIRI-JP 1 0.23 0 0 1 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 8 0.11 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 6 65303430 81251228 1 4 35 2 0 0 2 0 0.26 0.16 5 0 0 5 3 5 8 4 5 37.96 59.17 37.43 22 2 1 Whitelist LIRI-JP 0.62 0.36 0 0 0.59 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 8 0.11 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 8 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 9 21994533 22027280 1 1 35 0 0 0 1 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 37.96 99.33 0 0 1 NA Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 10 60451995 123240706 2 2 35 0 0 1 1 0 0.57 0.68 1 NA 0 NA NA NA NA NA NA 37.96 0 99.82 0 2 NA Whitelist LIRI-JP 0.68 0.88 NA 0 0.64 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 4 0.06 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 11 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 12 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 13 20985914 99935450 2 2 35 0 0 1 1 0 0.57 0.03 4 0 0 4 4 4 6 5 6 37.96 82.97 2.88 0 1 3 Whitelist LIRI-JP 0.68 0.12 0 0 0.64 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 4 0.06 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 14 65201924 65225300 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 37.96 0 84.09 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 19 NA NA 0 0 35 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 20 18712499 58823946 2 2 35 0 0 1 1 0 0.57 0.04 4 NA 0 4 4 4 6 6 6 37.96 7.21 91.8 0 2 3 Whitelist LIRI-JP 0.68 0.14 NA 0 0.64 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 4 0.06 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK279 X NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK279 LIRI 0.35 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45291 RK279 male alive C22 69 570 NA NA Included Biliary-AdenoCA LIRI JP 1 18.75 LIRI-JP::RK280 1 25548581 217538998 1 9 111 0 7 0 1 1 0 0.86 13 0 0 13 7 13 13 7 13 80.07 100 0 0 4 6 Whitelist LIRI-JP 0.15 0.99 0 0 0.04 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 17 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 2 43817843 234888155 1 5 111 1 4 0 0 0 0.04 0.61 11 0 0 11 7 9 11 7 9 80.07 99.89 0 0 4 6 Whitelist LIRI-JP 0.45 0.82 0 0 0.36 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 10 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 3 37076321 196695607 1 13 111 3 8 0 0 2 0 0.01 20 0 0 20 11 20 27 15 15 80.07 99.71 0.09 0 4 6 Whitelist LIRI-JP 0.1 0.04 0 0 0.07 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 24 0.11 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 4 663861 901467 1 1 111 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 8 3 5 80.07 25.22 72.39 0 4 6 Whitelist LIRI-JP 0.62 0.12 NA NA 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 5 58675519 59004329 4 4 111 0 2 1 1 0 0.57 0.12 2 0 0 NA NA NA 15 5 9 80.07 99.86 0 0 5 7 Whitelist LIRI-JP 0.68 0.3 0 0 0.64 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 8 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 6 37006958 80758294 1 7 111 4 1 0 0 2 0.04 0.55 8 0 0 8 3 8 15 5 5 80.07 40.53 59.33 0 4 2 Whitelist LIRI-JP 11 0.41 0.77 0 0 0.36 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 12 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 7 19095782 133665475 1 5 111 1 3 0 0 1 0.11 0.83 11 0 0 11 5 6 12 6 6 80.07 99.78 0 0 4 5 Whitelist LIRI-JP 0.62 0.97 0 0 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 9 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 8 17036485 104062818 1 4 111 0 2 0 0 2 0.11 1 7 0 0 7 3 5 10 5 6 80.07 99.81 0.18 0 6 4 Whitelist LIRI-JP 14 0.54 1 0 0 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 6 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 9 84652319 115653010 1 6 111 0 4 1 1 0 0.11 0.45 10 0 0 10 10 10 16 13 13 80.07 71.18 28.16 0 4 6 Whitelist LIRI-JP 0.54 0.7 0 0 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 12 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 10 93251760 118931477 1 2 111 0 2 0 0 0 0.11 0.25 4 NA 0 4 3 4 8 4 8 80.07 49.57 50.27 0 2 3 Whitelist LIRI-JP 0.54 0.49 NA 0 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 11 587914 8693167 1 4 111 0 2 0 0 2 0.11 0.36 6 0.22 0 6 6 6 12 7 7 80.07 99.57 0 0 4 6 Whitelist LIRI-JP 0.54 0.62 0.22 0.01 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 6 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 12 69541748 115904220 8 8 111 1 3 2 2 0 0.8 0.01 14 0 0 14 5 8 21 5 8 80.07 65.58 30.68 0 4 13 Whitelist LIRI-JP 0.87 0.03 0 0 0.84 0 Low confidence LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC With other complex events 16 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 13 114903576 115067673 1 1 111 0 1 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 80.07 74.9 25.01 0 3 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 14 38504228 102673376 1 9 111 0 7 0 0 2 0 0 13 0 0 13 4 9 14 5 9 80.07 99.09 0 0 5 8 Whitelist LIRI-JP 0.02 0.02 0 0 0.01 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 16 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 15 72534952 72826370 1 1 111 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 80.07 99.83 0 0 3 4 Whitelist LIRI-JP 0.62 0.63 NA NA 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 16 1845225 87281946 1 2 111 0 2 0 0 0 0.11 1 4 NA 0.04 4 3 4 5 3 5 80.07 99.9 0 0 3 4 Whitelist LIRI-JP 0.54 1 NA 0.04 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 17 42804282 80782028 1 4 111 0 4 0 0 0 0.01 0.55 8 0 0 8 4 5 14 6 6 80.07 70.49 24.52 0 5 7 Whitelist LIRI-JP 0.21 0.78 0 0 0.16 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 8 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 18 2905480 60876373 1 5 111 2 3 0 0 0 0.14 0.23 8 0 0 8 5 6 9 5 5 80.07 99.73 0.24 0 4 2 Whitelist LIRI-JP 0.62 0.46 0 0 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 10 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 19 4327429 4685477 1 1 111 0 1 0 0 0 0.39 0.48 2 NA NA NA NA NA 5 5 5 80.07 99.83 0 0 4 6 Whitelist LIRI-JP 0.62 0.73 NA NA 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 20 15396276 34438591 1 2 111 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 6 3 3 80.07 99.02 0 0 5 4 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 21 27725173 27988192 1 1 111 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 80.07 77.44 0 0 4 6 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 22 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK280 X 62112079 71606125 1 2 111 0 1 1 0 0 0.57 0.19 4 NA 0 4 3 4 4 3 3 80.07 96.84 0 0 3 6 Whitelist LIRI-JP 0.68 0.41 NA 0 0.64 0 No LIRI-JP RK280 LIRI 0.87 3.75 Liver-HCC NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 LIRI-JP DO50832 RK280 male alive C22 73 90 NA NA Included Liver-HCC LIRI JP 1 2.96 LIRI-JP::RK282 1 51238444 241475887 1 4 40 4 0 0 0 0 0.01 0.24 7 0 0 7 4 4 8 4 5 32.78 79.41 20.59 8 3 4 Whitelist LIRI-JP 0.21 0.48 0 0 0.16 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 8 0.1 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 2 137020612 137039829 1 1 40 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 32.78 60.11 37.2 0 3 NA Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 3 15727075 15852671 1 1 40 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA NA NA NA 32.78 0.06 99.8 0 1 2 Whitelist LIRI-JP 0.62 0.62 0 NA 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 4 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 5 59835715 141169021 1 2 40 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 32.78 99.8 0.07 0 2 3 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 4 0.05 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 6 NA NA 0 0 40 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 7 50525336 50670848 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.78 99.68 0.09 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 8 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 9 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 11 85197771 97884264 1 2 40 2 0 0 0 0 0.11 0.71 2 NA 0 NA NA NA NA NA NA 32.78 0.02 99.56 0 1 2 Whitelist LIRI-JP 0.54 0.9 NA 0 0.48 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 4 0.05 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 12 1853016 122894996 9 10 40 1 2 3 3 1 0.75 0 4 0 0 4 4 4 5 5 5 32.78 17.37 82.55 0 1 2 Whitelist LIRI-JP 0.86 0 0 0 0.83 0 Low confidence LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC Canonical without polyploidization 19 0.24 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 13 99608073 99757527 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.78 0.13 99.87 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 14 63799464 95900026 1 2 40 1 1 0 0 0 0.57 0.13 5 0 0 5 0 3 6 3 3 32.78 0.3 98.78 0 2 1 Whitelist LIRI-JP 0.68 0.32 0 0 0.64 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 4 0.05 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 16 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 17 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 18 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 19 42334443 42345557 1 1 40 0 0 1 0 0 0.39 0.19 1 NA 0 NA NA NA NA NA NA 32.78 51.63 41.09 0 3 NA Whitelist LIRI-JP 0.62 0.41 NA 0 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 20 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 21 37699288 37713172 1 1 40 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 32.78 0 77.35 0 2 NA Whitelist LIRI-JP 0.62 0.24 NA NA 0.59 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 2 0.02 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 22 NA NA 0 0 40 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.63 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK282 X NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK282 LIRI 0.93 2.24 Liver-HCC NA 0 0 frameshift_deletion,17_7577058_-_C,CN:1 2 LIRI-JP DO50834 RK282 male alive C22 72 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK283 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 2 46216420 65390615 1 2 11 0 2 0 0 0 0.11 0.23 3 NA 0 NA NA NA 5 3 3 6.61 0.26 99.65 0 2 3 Whitelist LIRI-JP 0.54 0.47 NA 0 0.48 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 4 0.18 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 3 112465052 163727378 1 1 11 0 0 0 1 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 6.61 0.13 99.73 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 4 NA NA 0 0 11 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.12 NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 5 NA NA 0 0 11 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.75 NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 7 65563087 65727103 1 2 11 0 0 1 1 0 0.57 0.12 3 NA 0 NA NA NA NA NA NA 6.61 0.01 99.76 0 2 3 Whitelist LIRI-JP 0.68 0.3 NA 0 0.64 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 4 0.18 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 10 135004077 135347272 1 1 11 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA 4 3 4 6.61 0.63 99.16 0 3 NA Whitelist LIRI-JP 0.62 0.65 NA NA 0.59 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 2 0.09 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 15 NA NA 0 0 11 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.51 NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 17 NA NA 0 0 11 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK283 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK283 LIRI 0.25 2.06 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50837 RK283 female alive C22 53 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK284 1 NA NA 0 0 26 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 3 17671948 197431134 1 3 26 2 1 0 0 0 0.3 0.11 4 0 0 4 3 4 5 3 3 28.57 0.1 99.75 0 2 1 Whitelist LIRI-JP 0.62 0.28 0 0 0.59 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 4 58557039 80163516 3 3 26 0 2 1 0 0 0.3 0 5 0 0 5 3 5 6 3 4 28.57 31.25 68.74 0 2 1 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 6 0.12 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 5 76992013 161452088 5 8 26 1 1 1 2 3 0.9 0 8 0 0 8 3 4 10 3 6 28.57 65.44 31.9 0 2 5 Whitelist LIRI-JP 0.87 0 0 0 0.92 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 13 0.25 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 6 NA NA 0 0 26 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 7 NA NA 0 0 26 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.86 NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 8 NA NA 0 0 26 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.14 NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 11 NA NA 0 0 26 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.59 NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK284 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK284 LIRI 0.83 2.36 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50839 RK284 female alive C22 47 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 1 9677100 207299307 2 14 352 0 2 1 1 10 0.57 0.05 28 0 0 28 12 22 28 12 12 25.75 37.44 62.56 0 2 3 Whitelist LIRI-JP 0.62 0.16 0 0 0.64 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 18 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 2 162605321 162919799 10 10 352 2 3 2 3 0 0.94 0.12 3 0 0 NA NA NA 13 7 7 25.75 8.87 91.03 0 1 2 Whitelist LIRI-JP 0.96 0.31 0 0 0.96 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 20 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 3 136078458 136439922 2 2 352 2 0 0 0 0 0.11 0.53 2 0 0 NA NA NA 15 5 5 25.75 0.45 99.43 0 1 2 Whitelist LIRI-JP 0.54 0.76 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 4 38522688 170119514 1 11 352 2 6 0 0 3 0.01 0.02 14 0 0 14 12 14 16 13 13 25.75 22.44 77.55 0 2 3 Whitelist LIRI-JP 12 0.21 0.09 0 0 0.16 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 19 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 5 973432 156988868 4 8 352 1 1 1 1 4 1 0.51 18 0 0 18 10 11 19 11 12 25.75 0.73 99.12 0 2 3 Whitelist LIRI-JP 6 1 0.75 0 0 1 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 12 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 False positive; manually removed LIRI-JP::RK285 6 158550050 163021558 8 10 352 1 3 1 3 2 0.57 0 11 0 0 11 7 11 21 7 7 25.75 16.15 83.71 0 3 4 Whitelist LIRI-JP 8 0.68 0.01 0 0 0.64 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 18 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 False positive; manually removed LIRI-JP::RK285 7 5485525 150488904 1 13 352 5 5 0 0 3 0.02 0.81 13 0 0 13 7 13 14 8 8 25.75 53.6 46.18 0 1 2 Whitelist LIRI-JP 0.41 0.96 0 0 0.33 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 23 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 8 3686486 121889650 1 9 352 3 4 0 0 2 0.06 0.27 9 0 0 9 4 9 10 5 5 25.75 24.88 75.11 0 1 2 Whitelist LIRI-JP 0.62 0.52 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 16 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 9 6512755 133931222 1 9 352 1 4 0 0 4 0.04 0.58 6 0 0 6 5 6 7 5 5 25.75 0.26 99.04 0 2 3 Whitelist LIRI-JP 0.62 0.8 0 0 0.36 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 14 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 10 928830 89769679 1 13 352 3 3 1 0 6 0.28 0.8 14 0 0 14 5 14 16 6 6 25.75 49.31 50.51 0 2 1 Whitelist LIRI-JP 0.62 0.95 0 0 0.59 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 20 0.03 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 11 83704311 84972327 2 2 352 2 0 0 0 0 0.11 0.04 2 0 0 NA NA NA 19 5 11 25.75 30.14 69.31 0 1 2 Whitelist LIRI-JP 0.54 0.14 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 12 7177572 125292742 1 25 352 2 9 1 0 13 0 0.04 16 0 0 16 5 15 16 5 5 25.75 2.92 97 0 2 3 Whitelist LIRI-JP 4 0.32 0.14 0 0 0.05 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 37 0.05 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 13 42652857 99437382 1 7 352 2 5 0 0 0 0.02 0.56 14 0 0 14 5 12 14 5 5 25.75 56.68 43.21 0 3 2 Whitelist LIRI-JP 0.41 0.78 0 0 0.33 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 14 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 14 31709965 103706129 1 8 352 3 2 1 0 2 0.34 0.65 6 0 0 6 3 6 8 4 4 25.75 76.45 22.64 0 1 2 Whitelist LIRI-JP 7 0.68 0.86 0 0 0.59 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 14 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 15 41179388 91189826 1 8 352 1 3 0 0 4 0.11 1 6 0 0 6 4 6 7 5 5 25.75 0.28 99.72 0 2 3 Whitelist LIRI-JP 0.28 1 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 12 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 16 46762661 87853288 3 5 352 0 0 2 1 2 0.3 0.13 8 0 0 8 3 6 14 4 4 25.75 1.32 98.35 0 2 1 Whitelist LIRI-JP 12 0.62 0.33 0 0 0.59 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 8 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 17 43922296 79893403 1 16 352 2 8 0 1 5 0 0 15 0 0 15 3 7 20 4 4 25.75 95.18 4.81 0 4 3 Whitelist LIRI-JP 1 0.1 0.01 0 0 0.09 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 27 0.04 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 18 71881793 71920630 2 2 352 0 2 0 0 0 0.11 0.24 2 0 0 NA NA NA 9 5 5 25.75 0.42 99.55 0 2 3 Whitelist LIRI-JP 0.54 0.48 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 19 10223836 50011818 1 11 352 0 3 0 0 8 0.03 0.01 4 0 0 4 3 4 7 3 5 25.75 8.75 91.02 0 2 1 Whitelist LIRI-JP 12_9 0.62 0.03 0 0 0.33 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 14 0.02 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 20 9177738 9509531 2 2 352 0 2 0 0 0 0.11 0.01 4 0 0 4 0 3 11 6 6 25.75 51.89 41.01 0 2 3 Whitelist LIRI-JP 0.54 0.03 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 21 16478355 44835827 1 5 352 0 2 0 0 3 0.11 0.33 4 0 0 4 4 4 5 5 5 25.75 0.13 77.23 0 2 3 Whitelist LIRI-JP 0.62 0.59 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 7 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 22 35201781 35455942 2 2 352 0 2 0 0 0 0.11 0 3 0 0 NA NA NA NA NA NA 25.75 0.39 99.04 0 2 3 Whitelist LIRI-JP 0.54 0 0 0 0.48 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK285 X 147329212 149878062 1 2 352 1 1 0 0 0 0.57 0 4 0 0 4 4 4 8 8 8 25.75 78.72 21.28 0 1 2 Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK285 LIRI 0.81 1.9 Liver-HCC NA 4 0.01 NA 2 LIRI-JP DO50840 RK285 male alive C22 49 330 NA NA Included Liver-HCC LIRI JP 1 10.86 LIRI-JP::RK287 1 180976089 216300548 2 2 131 0 1 1 0 0 0.57 0.87 2 0 0 NA NA NA 10 4 6 81.02 90.58 9.42 0 4 5 Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 2 20173587 241978763 1 14 131 2 9 2 1 0 0.01 0.21 9 0 0 9 8 9 13 8 8 81.02 89.29 10.63 0 2 3 Whitelist LIRI-JP 0.23 0.43 0 0 0.18 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 28 0.11 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 3 1660319 178699520 1 3 131 2 1 0 0 0 0.3 0.09 2 0.02 0 NA NA NA 4 3 3 81.02 99.78 0.09 0 3 4 Whitelist LIRI-JP 0.62 0.24 0.02 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 4 69119276 145003594 1 4 131 2 2 0 0 0 0.26 0.48 1 0 0 NA NA NA 8 3 3 81.02 25.33 72.06 0 2 NA Whitelist LIRI-JP 0.62 0.73 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 5 178479869 178659450 2 2 131 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 81.02 99.87 0 0 5 NA Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 6 1421943 1626022 2 2 131 1 1 0 0 0 0.57 0 1 0 0 NA NA NA 7 3 3 81.02 99.66 0.08 0 3 NA Whitelist LIRI-JP 0.68 0 0 0 0.64 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 7 2336914 154140198 1 5 131 2 3 0 0 0 0.14 0.56 7 0 0 7 0 3 7 0 3 81.02 99.74 0.24 0 4 2 Whitelist LIRI-JP 0.62 0.79 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 10 0.04 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 8 128896681 142860380 1 3 131 3 0 0 0 0 0.03 0.17 4 0 0 4 3 4 16 7 7 81.02 95.45 0.83 0 4 3 Whitelist LIRI-JP 0.41 0.38 0 0 0.33 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 9 115528834 130229187 2 4 131 1 0 0 1 2 0.57 0.11 1 0 0 NA NA NA NA NA NA 81.02 99.99 0 0 3 NA Whitelist LIRI-JP 1 0.28 0 0 0.64 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 10 8749946 99970946 1 7 131 2 3 0 1 1 0.34 0.67 4 0 0 4 4 4 4 4 4 81.02 27.39 69.37 0 2 4 Whitelist LIRI-JP 0.77 0.88 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 13 0.05 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 11 95518895 134176736 1 5 131 2 1 0 0 2 0.3 1 1 0 0 NA NA NA NA NA NA 81.02 57.09 42.76 0 2 NA Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 12 56357570 116629587 1 4 131 1 3 0 0 0 0.11 0.84 6 0 0 6 6 6 6 6 6 81.02 99.92 0 0 3 4 Whitelist LIRI-JP 0.54 0.97 0 0 0.48 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 13 48984939 105597273 1 3 131 1 2 0 0 0 0.3 1 3 0 0 NA NA NA 9 5 7 81.02 99.85 0.15 0 4 2 Whitelist LIRI-JP 0.62 1 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 14 22676443 24906017 1 2 131 0 2 0 0 0 0.11 0.07 1 0 0 NA NA NA 6 3 4 81.02 47.87 51.22 0 4 NA Whitelist LIRI-JP 0.54 0.21 0 0 0.48 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 15 66162503 75644487 1 6 131 0 2 0 0 4 0.11 0.1 1 0 0 NA NA NA NA NA NA 81.02 100 0 0 4 NA Whitelist LIRI-JP 0.68 0.26 0 0 0.48 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 16 26356486 85394760 1 2 131 1 1 0 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 81.02 99.85 0 0 3 NA Whitelist LIRI-JP 0.68 1 0 0 0.64 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 17 25973563 26329324 2 2 131 0 2 0 0 0 0.11 0.17 1 0 0 NA NA NA 5 3 3 81.02 86.21 13.79 0 4 NA Whitelist LIRI-JP 0.54 0.39 0 0 0.48 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 4 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 18 2937798 43972765 1 4 131 0 2 0 0 2 0.11 0.17 3 0.02 0.05 NA NA NA 5 3 3 81.02 95.35 0 0 4 5 Whitelist LIRI-JP 0.68 0.38 0.02 0.05 0.48 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 19 11423993 41526394 1 3 131 1 2 0 0 0 0.3 0.75 4 0 0 4 0 3 9 3 5 81.02 92.72 0 0 3 4 Whitelist LIRI-JP 0.62 0.91 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 6 0.02 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 20 14904259 15296022 1 1 131 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 5 5 5 81.02 99.9 0 0 4 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 21 42051000 42274289 1 1 131 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 81.02 77.35 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 22 31777178 32032482 1 1 131 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 81.02 0.18 99.82 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 2 0.01 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK287 X 66635298 143445960 1 5 131 0 1 2 0 2 0.3 0.84 1 0 0 NA NA NA NA NA NA 81.02 100 0 0 3 NA Whitelist LIRI-JP 0.68 0.98 0 0 0.59 0 No LIRI-JP RK287 LIRI NA NA Liver-HCC NA 8 0.03 NA 4 LIRI-JP DO50842 RK287 female alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 1 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 2 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 3 135862967 174972880 3 3 34 2 1 0 0 0 0.3 0.03 18 0 0 18 7 18 21 9 21 77.34 82.11 17.84 0 2 3 Whitelist LIRI-JP 0.62 0.11 0 0 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 6 0.09 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 4 53812236 54003773 1 1 34 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 77.34 28.62 71.37 0 3 NA Whitelist LIRI-JP 0.62 0.74 NA NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 5 NA NA 0 0 34 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 6 25722843 78968928 1 2 34 1 0 1 0 0 0.57 0.05 3 0 0 NA NA NA 5 3 3 77.34 99.76 0 0 4 6 Whitelist LIRI-JP 0.68 0.17 0 0 0.64 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 4 0.06 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 7 110344481 110355353 1 1 34 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA 15 3 15 77.34 99.97 0 0 5 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 8 113338462 113361957 1 1 34 0 1 0 0 0 0.39 0.69 1 NA NA NA NA NA 18 15 15 77.34 71.47 25.01 0 4 NA Whitelist LIRI-JP 0.62 0.89 NA NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 9 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 10 77303439 77315891 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 77.34 99.93 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 11 69077577 70726025 5 5 34 1 1 1 2 0 0.9 0 11 0 0 11 0 3 14 0 0 77.34 54.78 45.07 0 28 4 Whitelist LIRI-JP 0.93 0.02 0 0 0.92 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 10 0.15 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 14 NA NA 0 0 34 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.54 NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 16 72426230 72683357 1 1 34 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA 5 4 4 77.34 46.5 48.97 0 2 NA Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 19 17274035 20040051 1 1 34 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 15 3 3 77.34 99.83 0 0 3 NA Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK289 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK289 LIRI NA NA Liver-HCC NA 0 0 NA 3 LIRI-JP DO50844 RK289 male alive C22 75 300 NA NA Included Liver-HCC LIRI JP 1 9.87 LIRI-JP::RK297 1 NA NA 0 0 34 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 2 81761237 81833154 1 1 34 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 13.58 0.01 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.61 NA NA 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 3 105093110 105144471 1 1 34 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 13.58 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.91 NA NA 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 4 65693335 115651591 2 2 34 2 0 0 0 0 0.11 0.07 1 0 0 NA NA NA NA NA NA 13.58 0 99.8 0 2 NA Whitelist LIRI-JP 9 0.54 0.22 0 0 0.48 0 Linked to low confidence LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC With other complex events 4 0.06 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 7 NA NA 0 0 34 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 8 33945856 35610219 3 3 34 1 0 0 2 0 0.3 0.25 2 NA 0 NA NA NA NA NA NA 13.58 23.11 76.88 0 1 2 Whitelist LIRI-JP 0.62 0.49 NA 0 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 6 0.09 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 9 9687693 31438879 11 11 34 4 5 1 1 0 0.2 0 9 0 0 9 6 9 10 6 6 13.58 8.79 88.12 0 1 2 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 Low confidence LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC Canonical without polyploidization 22 0.32 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 10 21857618 134710363 1 2 34 2 0 0 0 0 0.11 0.67 3 NA 0 NA NA NA NA NA NA 13.58 15.59 84.24 0 2 1 Whitelist LIRI-JP 0.54 0.87 NA 0 0.48 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 12 52288598 61077820 1 1 34 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.58 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 13 33799019 76138338 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.58 36.76 49.08 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 16 47206228 47472301 1 1 34 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 13.58 0.29 99.6 0 0 2 Whitelist LIRI-JP 0.62 0.82 NA NA 0.59 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 18 20579584 69268783 1 2 34 1 1 0 0 0 0.57 0.23 2 NA 0 NA NA NA NA NA NA 13.58 0.31 99.68 0 2 3 Whitelist LIRI-JP 0.68 0.47 NA 0 0.64 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 4 0.06 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK297 X NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK297 LIRI 0.33 1.95 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50845 RK297 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK298 1 9742897 10477062 4 4 74 0 0 2 2 0 0.26 0 3 0 0 NA NA NA 12 3 3 76.45 100 0 0 3 6 Whitelist LIRI-JP 0.62 0 0 0 0.59 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 8 0.05 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 2 NA NA 0 0 74 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.08 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 3 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 4 30484272 180989126 1 5 74 2 0 0 1 2 0.3 0.64 8 0 0 8 4 8 10 4 4 76.45 26.27 71.36 0 1 2 Whitelist LIRI-JP 0.68 0.85 0 0 0.59 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 8 0.05 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 5 NA NA 0 0 74 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 0 NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 6 67408137 94070904 1 2 74 2 0 0 0 0 0.11 0.33 2 NA 0 NA NA NA 5 0 5 76.45 65.12 31.6 0 3 4 Whitelist LIRI-JP 0.54 0.58 NA 0 0.48 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 4 0.03 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 7 NA NA 0 0 74 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.41 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 8 3753300 129155055 1 3 74 3 0 0 0 0 0.03 0.28 7 0 0 7 3 6 7 3 6 76.45 96.58 0 0 3 4 Whitelist LIRI-JP 0.41 0.52 0 0 0.33 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 6 0.04 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 9 1239088 24282207 12 12 74 2 4 3 3 0 0.88 0 24 0 0 24 4 6 26 4 6 76.45 93.35 5.93 4 2 3 Whitelist LIRI-JP 0.93 0 0 0 0.91 0 Low confidence LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA With other complex events 24 0.16 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 10 NA NA 0 0 74 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 11 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 12 12795687 78227650 1 3 74 2 0 0 0 1 0.11 0.4 7 0 0 7 3 3 8 3 3 76.45 54.19 42.07 0 2 4 Whitelist LIRI-JP 0.62 0.65 0 0 0.48 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 5 0.03 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 13 85237293 87582405 2 2 74 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 13 3 3 76.45 68.73 28.49 0 3 2 Whitelist LIRI-JP 0.54 0.06 0 0 0.48 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 4 0.03 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 14 NA NA 0 0 74 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.91 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 15 42848660 43254858 1 1 74 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 76.45 99.82 0 0 3 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 16 NA NA 0 0 74 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 17 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 18 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 19 9474916 21704206 1 4 74 1 1 0 0 2 0.57 0.06 4 0 0 4 3 4 6 3 5 76.45 92.72 0 0 3 4 Whitelist LIRI-JP 1 0.18 0 0 0.64 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 6 0.04 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 20 15008892 15453382 1 1 74 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 3 3 76.45 98.29 0.71 0 2 4 Whitelist LIRI-JP 0.62 0.88 NA NA 0.59 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 21 23182533 38862447 1 2 74 2 0 0 0 0 0.11 0.23 3 NA 0 NA NA NA 5 3 3 76.45 77.83 0 0 4 1 Whitelist LIRI-JP 0.54 0.46 NA 0 0.48 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 4 0.03 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 22 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 0 0 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK298 X 89926250 145682882 1 2 74 2 0 0 0 0 0.11 0.59 4 NA 0 4 4 4 6 6 6 76.45 6.24 93.76 0 1 2 Whitelist LIRI-JP 0.54 0.81 NA 0 0.48 0 No LIRI-JP RK298 LIRI 0.28 3.37 Biliary-AdenoCA NA 4 0.03 frameshift_deletion,17_7578285_-_CAGACCTAAGA,CN:1 5 LIRI-JP DO45293 RK298 male alive C22 68 450 NA NA Included Biliary-AdenoCA LIRI JP 1 14.8 LIRI-JP::RK303 1 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 2 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 4 58748361 89943160 3 3 13 0 1 1 1 0 0.8 0 7 0 0 7 5 7 7 5 7 13.77 1.7 98.29 0 2 5 Whitelist LIRI-JP 0.87 0.01 0 0 0.84 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 6 0.23 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 5 18709623 18776571 1 1 13 0 1 0 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 13.77 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.79 NA NA 0.59 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 2 0.08 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 6 63540858 63731353 2 2 13 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 13.77 0 99.82 0 2 NA Whitelist LIRI-JP 0.68 0.03 0 0 0.64 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 4 0.15 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 12 NA NA 0 0 13 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.71 NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 18 NA NA 0 0 13 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.15 NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 21 NA NA 0 0 13 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.35 NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK303 X NA NA 0 0 13 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 0 No LIRI-JP RK303 LIRI 0.5 1.91 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45295 RK303 male alive C22 76 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK304 1 28733037 85800651 1 2 37 2 0 0 0 0 0.11 0.77 3 0 0 NA NA NA 8 3 5 10.92 0.21 96.73 0 2 4 Whitelist LIRI-JP 0.54 0.93 0 0 0.48 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 2 28176485 206995390 1 4 37 4 0 0 0 0 0.01 0.55 8 0 0 8 5 8 9 5 5 10.92 0.71 99.19 0 2 1 Whitelist LIRI-JP 0.21 0.78 0 0 0.16 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 8 0.11 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 3 114574461 125012051 1 2 37 2 0 0 0 0 0.11 0.74 3 0 0 NA NA NA 9 3 7 10.92 0.18 99.65 1 2 1 Whitelist LIRI-JP 0.54 0.91 0 0 0.48 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 4 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 5 58551233 112650141 1 3 37 1 2 0 0 0 0.3 0.08 8 0 0 8 4 4 19 6 7 10.92 8.04 89.3 0 2 3 Whitelist LIRI-JP 0.62 0.23 0 0 0.59 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 6 44814579 45087306 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.92 0 97.21 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 7 66597947 127674067 1 5 37 5 0 0 0 0 0 0.01 5 0 0 5 4 5 15 4 8 10.92 71.37 26.28 0 2 3 Whitelist LIRI-JP 0.1 0.06 0 0 0.07 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 10 0.14 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 8 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 8 8 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 10 99390847 99437030 1 1 37 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 10.92 0.03 96.58 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 11 9867371 116825216 1 3 37 3 0 0 0 0 0.03 0.03 13 0.07 0 13 4 5 14 5 5 10.92 2.7 94.23 0 2 1 Whitelist LIRI-JP 0.41 0.1 0.07 0 0.33 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 14 35654664 91492718 1 2 37 2 0 0 0 0 0.11 0.11 7 0 0 7 3 7 7 3 3 10.92 0.64 84.36 0 2 1 Whitelist LIRI-JP 0.54 0.28 0 0 0.48 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 15 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 16 19598559 78423446 1 3 37 3 0 0 0 0 0.03 0.08 5 0 0 5 3 5 6 3 6 10.92 0.25 95.21 0 2 1 Whitelist LIRI-JP 0.41 0.22 0 0 0.33 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 6 0.08 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 17 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 20 15395957 15782735 1 1 37 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 10.92 0 99.87 0 2 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 2 0.03 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK304 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK304 LIRI 0.25 2 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50848 RK304 male alive C22 74 480 NA NA Included Liver-HCC LIRI JP 1 15.79 LIRI-JP::RK305 1 168511526 168549398 1 1 28 0 0 1 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 43.42 41.9 58.09 0 4 NA Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 3 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 4 178786632 178814696 1 1 28 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA NA NA NA 43.42 0.01 99.97 0 1 2 Whitelist LIRI-JP 0.62 0.9 NA NA 0.59 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 5 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 7 107538117 108809866 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 7 3 7 43.42 97.44 0 0 3 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 8 551048 49226241 2 3 28 1 1 0 0 1 0.57 0 10 0 0 10 3 6 11 3 3 43.42 96.11 0.47 0 1 3 Whitelist LIRI-JP 0.87 0 0 0 0.64 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 5 0.09 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 9 29498555 29513936 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 43.42 0 99.3 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 10 12412896 76182396 1 2 28 2 0 0 0 0 0.11 0.14 4 0 0 4 4 4 5 5 5 43.42 0.52 99.37 0 1 2 Whitelist LIRI-JP 0.54 0.33 0 0 0.48 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 11 49843887 65181281 1 3 28 1 1 0 1 0 0.8 0.14 3 0 0 NA NA NA NA NA NA 43.42 99.57 0 0 3 1 Whitelist LIRI-JP 0.87 0.33 0 0 0.84 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 6 0.11 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 12 106498776 118194414 2 4 28 1 1 1 1 0 1 0.01 8 0 0 8 4 6 9 4 6 43.42 16.54 83.38 0 2 3 Whitelist LIRI-JP 1 0.04 0 0 1 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 8 0.14 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 14 20809245 20838760 1 1 28 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 43.42 0 99.09 0 2 NA Whitelist LIRI-JP 0.62 0.81 NA NA 0.59 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 2 0.04 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 22 29137652 42357275 1 2 28 0 2 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 43.42 0.3 99.7 0 2 3 Whitelist LIRI-JP 0.54 0.15 NA 0 0.48 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 4 0.07 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK305 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK305 LIRI 0.7 2.44 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50850 RK305 male alive C22 74 720 NA NA Included Liver-HCC LIRI JP 1 23.68 LIRI-JP::RK306 1 NA NA 0 0 42 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 2 169598648 173177656 2 2 42 0 0 1 1 0 0.57 0.08 2 0 0 NA NA NA 32 6 7 23.8 23.37 76.53 0 1 2 Whitelist LIRI-JP 0.68 0.24 0 0 0.64 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 3 85018366 87253449 5 5 42 2 1 1 1 0 0.9 0.22 5 0 0 5 5 5 10 5 7 23.8 0.42 96.13 0 2 4 Whitelist LIRI-JP 0.93 0.45 0 0 0.92 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 10 0.12 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 4 67979130 68119596 1 1 42 1 0 0 0 0 0.39 0.76 2 0 NA NA NA NA 7 5 5 23.8 0.28 99.7 0 1 2 Whitelist LIRI-JP 0.62 0.92 0 NA 0.59 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 5 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 19 8 8 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 6 47681229 71918702 1 1 42 0 0 1 0 0 0.39 1 6 NA NA 6 4 5 6 4 5 23.8 94.51 2.54 0 3 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 7 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 8 33832982 50702008 10 12 42 3 2 2 3 2 0.94 0 14 0 0 14 7 14 44 7 11 23.8 92.21 4.37 0 2 3 Whitelist LIRI-JP 0.93 0 0 0 0.96 1 High confidence LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC With other complex events 22 0.26 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 9 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 10 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 11 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 12 95273164 97356929 2 2 42 0 0 1 1 0 0.57 0.45 1 0 0 NA NA NA NA NA NA 23.8 0.14 99.78 0 2 NA Whitelist LIRI-JP 0.68 0.69 0 0 0.64 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 4 0.05 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 13 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA 13 5 13 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 15 50683981 50936573 1 1 42 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 23.8 15.66 79.41 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 16 67117737 67145837 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.8 1.69 98.21 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 17 NA NA 0 0 42 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.57 NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 18 32597668 32722214 1 1 42 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 11 7 11 23.8 13.72 86.24 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 20 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 21 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK306 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK306 LIRI 0.86 2.02 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50851 RK306 male alive C22 80 540 NA NA Included Liver-HCC LIRI JP 1 17.76 LIRI-JP::RK307 1 206814168 207084574 2 2 89 0 1 1 0 0 0.57 0.43 1 0 0 NA NA NA 7 3 3 32.67 22.99 77.01 0 1 NA Whitelist LIRI-JP 0.68 0.68 0 0 0.64 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 2 25972430 187260705 1 2 89 1 1 0 0 0 0.57 0.03 2 NA 0 NA NA NA NA NA NA 32.67 0.12 99.78 0 1 2 Whitelist LIRI-JP 0.68 0.12 NA 0 0.64 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 3 4263215 4595574 3 3 89 1 1 0 1 0 0.8 0.14 4 0.02 0 4 4 4 12 5 5 32.67 55.88 43.98 0 0 1 Whitelist LIRI-JP 0.87 0.34 0.03 0 0.84 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 6 0.03 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 4 NA NA 0 0 89 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.11 NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 5 6495554 11289491 1 2 89 2 0 0 0 0 0.11 0.38 4 NA 0 4 4 4 6 6 6 32.67 15.79 84.07 0 2 3 Whitelist LIRI-JP 0.54 0.63 NA 0 0.48 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 6 144819172 162778287 8 8 89 5 1 1 1 0 0.11 0 9 0 0 9 5 9 19 5 7 32.67 36.9 62.96 0 1 0 Whitelist LIRI-JP 0.54 0 0 0 0.48 1 Low confidence LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA With other complex events 16 0.09 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 7 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 8 47769789 143083576 19 19 89 3 7 4 5 0 0.61 0 45 0 0 45 9 13 47 9 13 32.67 76.21 20.37 3 1 2 Whitelist LIRI-JP 0.72 0 0 0 0.68 1 High confidence LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA With other complex events 38 0.21 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 9 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 10 3327342 3421404 1 1 89 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 4 4 4 32.67 38.24 61.58 0 1 2 Whitelist LIRI-JP 0.62 0.42 NA NA 0.59 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 11 NA NA 0 0 89 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.32 NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 12 10675065 15250327 1 2 89 1 0 0 0 1 0.39 0.8 4 NA 0 4 4 4 5 5 5 32.67 0.97 98.95 0 1 2 Whitelist LIRI-JP 0.54 0.95 NA 0 0.59 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 3 0.02 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 13 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 14 56412147 79304555 6 6 89 2 3 1 0 0 0.34 0 11 0 0 11 7 8 14 7 8 32.67 64.82 34.26 12 1 3 Whitelist LIRI-JP 0.62 0.01 0 0 0.59 1 High confidence LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA Canonical without polyploidization 12 0.07 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 15 NA NA 0 0 89 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 16 78629483 78667301 1 1 89 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.67 0.04 99.86 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 17 NA NA 0 0 89 0 0 0 0 0 NA 0.31 NA 0 NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.56 0 NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 18 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 19 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 20 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 21 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 22 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK307 X 6764075 7144995 1 2 89 2 0 0 0 0 0.11 0.63 2 NA 0 NA NA NA 4 3 3 32.67 26.6 73.17 0 1 2 Whitelist LIRI-JP 0.54 0.84 NA 0 0.48 1 No LIRI-JP RK307 LIRI 0.37 1.79 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45297 RK307 female deceased C22 61 1260 NA NA Included Biliary-AdenoCA LIRI JP 1 41.45 LIRI-JP::RK308 1 85812480 85908656 1 1 290 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 12.93 0 100 0 2 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 2 NA NA 0 0 290 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 0 NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 3 999520 181068319 35 127 290 12 6 12 5 92 0.18 0 65 0 0 65 42 65 65 42 42 12.93 25.25 70.89 1 1 2 Whitelist LIRI-JP 13_6 0.74 0 0 0 0.59 1 High confidence LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA Canonical without polyploidization 162 0.28 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 4 1957452 182706844 1 11 290 1 0 1 0 9 0.57 0.05 2 0 0 NA NA NA NA NA NA 12.93 0.31 99.67 0 1 2 Whitelist LIRI-JP 13_3_6 0.74 0.15 0 0 0.64 1 Linked to high confidence LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA With other complex events 13 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 5 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 6 4291463 102377483 27 131 290 5 8 6 8 104 0.8 0 54 0 0 54 21 35 58 21 21 12.93 5.99 90.84 0 1 2 Whitelist LIRI-JP 13_3 0.68 0 0 0 0.84 1 High confidence LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA With other complex events 158 0.27 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 7 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 8 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 9 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 10 599811 659037 1 1 290 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 12.93 0 99.83 1 2 NA Whitelist LIRI-JP 0.62 0.02 0 NA 0.59 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 11 NA NA 0 0 290 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0 NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 12 NA NA 0 0 290 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.13 0 NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 13 20391473 54701211 17 89 290 5 5 3 4 72 0.89 0 38 0 0 38 38 38 43 41 41 12.93 6.69 89.9 0 1 2 Whitelist LIRI-JP 3_6 0.96 0 0 0 0.92 1 High confidence LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA Canonical without polyploidization 106 0.18 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 14 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 15 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 16 78453193 78588000 2 2 290 1 1 0 0 0 0.57 0.1 3 0 0 NA NA NA 6 4 4 12.93 0.76 99.14 0 2 3 Whitelist LIRI-JP 0.68 0.26 0 0 0.64 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 17 19878488 21122307 1 1 290 0 0 1 0 0 0.39 0.01 1 0 NA NA NA NA 7 7 7 12.93 0.64 99.32 0 2 NA Whitelist LIRI-JP 0.62 0.04 0 NA 0.59 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 18 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 19 32501825 58859068 18 18 290 5 5 5 3 0 0.88 0 30 0 0 30 17 30 32 17 17 12.93 26.78 65.86 0 4 2 Whitelist LIRI-JP 0.93 0 0 0 0.91 1 High confidence LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA With other complex events 36 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 20 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 21 NA NA 0 0 290 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 22 33689297 33760865 1 1 290 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 12.93 0.14 99.86 0 1 2 Whitelist LIRI-JP 0.62 0.94 NA NA 0.59 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK308 X 78739310 78750977 1 1 290 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 12.93 0 99.77 1 2 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK308 LIRI 0.86 1.98 Biliary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 2 LIRI-JP DO45299 RK308 female alive C22 70 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 1 43619384 195782181 1 2 125 1 0 1 0 0 0.57 0.5 7 0 0 7 5 7 12 5 5 32.45 32.93 67.06 3 3 2 Whitelist LIRI-JP 0.68 0.75 0 0 0.64 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 2 105105861 224679056 3 3 125 1 0 1 1 0 0.8 0.63 6 0 0 6 6 6 8 8 8 32.45 19.46 80.45 0 2 3 Whitelist LIRI-JP 0.87 0.84 0 0 0.84 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 6 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 3 70630205 83422329 1 3 125 1 0 1 0 1 0.57 0.86 5 0 0 5 4 5 10 5 5 32.45 43.33 56.55 0 2 3 Whitelist LIRI-JP 0.87 0.99 0 0 0.64 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 5 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 4 64556865 164158941 1 6 125 2 1 1 1 1 0.9 0.37 7 0 0 7 7 7 12 8 8 32.45 51.8 48.18 0 1 2 Whitelist LIRI-JP 0.93 0.62 0 0 0.92 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 11 0.04 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 5 6533052 62514024 1 2 125 1 1 0 0 0 0.57 0.85 4 0 0 4 4 4 6 5 5 32.45 40.63 59.24 0 1 2 Whitelist LIRI-JP 0.68 0.99 0 0 0.64 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 6 153624190 153659599 1 1 125 1 0 0 0 0 0.39 0.57 1 0 NA NA NA NA 7 4 4 32.45 58.51 41.35 0 2 NA Whitelist LIRI-JP 0.62 0.79 0 NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 7 66784259 66794439 1 1 125 0 1 0 0 0 0.39 0.55 1 0 NA NA NA NA NA NA NA 32.45 0 99.77 0 2 NA Whitelist LIRI-JP 0.62 0.78 0 NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 8 NA NA 0 0 125 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.09 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 9 21301098 135899537 1 5 125 2 0 0 0 3 0.11 0.35 5 0.01 0 5 4 5 8 5 5 32.45 23.23 76.06 0 1 2 Whitelist LIRI-JP 0.68 0.6 0.01 0 0.48 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 7 0.03 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 10 16687100 94502008 1 3 125 2 0 0 0 1 0.11 0.19 6 0 0 6 4 6 8 4 4 32.45 23.43 76.4 0 1 2 Whitelist LIRI-JP 0.62 0.41 0 0 0.48 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 5 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 11 68337596 130009453 1 2 125 1 0 0 0 1 0.39 0.09 2 0 NA NA NA NA 4 4 4 32.45 21.55 78.02 0 1 2 Whitelist LIRI-JP 0.68 0.24 0 NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 3 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 12 116719473 124842873 2 2 125 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 9 5 5 32.45 34.16 65.76 0 2 NA Whitelist LIRI-JP 0.68 0.04 0 0 0.64 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 13 32353628 61695857 1 1 125 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 32.45 25.48 74.52 0 1 2 Whitelist LIRI-JP 0.62 0.7 NA NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 14 32028569 47999516 1 1 125 1 0 0 0 0 0.39 1 2 NA 0 NA NA NA 4 4 4 32.45 37.31 61.78 0 1 2 Whitelist LIRI-JP 0.62 1 NA 0 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 15 60631635 60733576 1 1 125 0 1 0 0 0 0.39 0.01 2 0 0 NA NA NA 5 3 4 32.45 58.62 41.2 0 2 4 Whitelist LIRI-JP 0.62 0.04 0 0 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 16 51394366 64711868 1 2 125 0 1 1 0 0 0.57 0.58 2 0 0 NA NA NA 4 4 4 32.45 27.46 72.41 0 1 2 Whitelist LIRI-JP 0.68 0.8 0 0 0.64 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 17 NA NA 0 0 125 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.93 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 18 42439136 54683128 1 1 125 1 0 0 0 0 0.39 0.39 2 0 NA NA NA NA 4 4 4 32.45 43.6 56.37 0 1 2 Whitelist LIRI-JP 0.62 0.64 0 NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 19 NA NA 0 0 125 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 20 17193439 17345289 1 1 125 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 12 5 5 32.45 21.87 77.15 0 3 5 Whitelist LIRI-JP 0.62 0 0 NA 0.59 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 21 NA NA 0 0 125 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 22 NA NA 0 0 125 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK309 X NA NA 0 0 125 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.45 NA NA NA 0 No LIRI-JP RK309 LIRI 0.3 1.92 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45301 RK309 male deceased C22 56 1440 NA NA Included Biliary-AdenoCA LIRI JP 1 47.37 LIRI-JP::RK310 1 5617702 5680355 1 1 24 0 1 0 0 0 0.39 0.04 2 0.05 NA NA NA NA 8 8 8 14.44 22.92 77.08 0 1 2 Whitelist LIRI-JP 0.62 0.13 0.05 NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 2 102288812 214888963 1 5 24 1 0 1 0 3 0.57 0.05 4 0 0 4 4 4 5 5 5 14.44 0.35 99.55 0 1 2 Whitelist LIRI-JP 0.93 0.15 0 0 0.64 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 7 0.15 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 3 71605667 71661312 1 1 24 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 7 4 4 14.44 37.2 59.64 0 0 1 Whitelist LIRI-JP 0.62 0.24 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 4 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 5 85838202 87867293 1 1 24 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 5 5 14.44 1.12 98.74 0 1 2 Whitelist LIRI-JP 0.62 0.87 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 6 31474157 31552739 1 1 24 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA 6 4 4 14.44 53.41 46.44 0 2 3 Whitelist LIRI-JP 0.62 0.39 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 7 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 10 15421710 15432266 1 1 24 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.44 0.1 99.72 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 11 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 13 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 14 NA NA 0 0 24 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 16 NA NA 0 0 24 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.33 NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 18 21971475 22337856 1 1 24 0 0 0 1 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 14.44 0 99.96 0 2 NA Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 19 33119380 33182029 2 2 24 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA NA NA NA 14.44 0.08 99.74 0 2 1 Whitelist LIRI-JP 0.68 0.05 0 0 0.64 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 4 0.08 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 21 29078681 30317754 1 1 24 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 14.44 2.57 74.78 0 1 2 Whitelist LIRI-JP 0.62 0.5 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 22 39677907 39829498 1 1 24 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 14.44 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.49 NA NA 0.59 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK310 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK310 LIRI 0.68 1.85 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45303 RK310 female alive C22 62 990 NA NA Included Biliary-AdenoCA LIRI JP 1 32.57 LIRI-JP::RK312 1 81207368 232106305 1 4 29 1 0 0 2 1 0.3 0.02 3 0 0 NA NA NA 6 3 3 23.87 18.96 81.03 0 1 2 Whitelist LIRI-JP 0.62 0.09 0 0 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 7 0.12 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 2 110454424 110497911 1 1 29 0 1 0 0 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 23.87 0 99.89 0 2 NA Whitelist LIRI-JP 0.62 0.55 0 NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 3 151678434 169407321 3 3 29 1 0 1 1 0 0.8 0.05 3 0 0 NA NA NA 4 4 4 23.87 44.42 52.52 0 2 1 Whitelist LIRI-JP 0.87 0.16 0 0 0.84 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 6 0.1 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 4 63639667 76052075 3 3 29 1 1 1 0 0 0.8 0 5 0 0 5 5 5 13 9 9 23.87 44.18 53.45 2 2 3 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 6 0.1 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 5 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 7 22249358 22454314 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 23.87 97.3 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 8 NA NA 0 0 29 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.87 NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 9 21236929 22129563 1 1 29 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA 4 3 3 23.87 22.98 76.85 0 0 1 Whitelist LIRI-JP 0.62 0.57 NA NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 10 85849052 112354160 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.87 19.56 80.27 0 1 2 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 12 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 14 NA NA 0 0 29 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.47 NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 18 NA NA 0 0 29 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.77 NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 19 43723510 43787165 1 1 29 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 23.87 0 99.83 0 2 NA Whitelist LIRI-JP 0.62 0.69 NA NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 21 33456727 35973335 1 1 29 0 1 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 23.87 77.55 0 0 1 NA Whitelist LIRI-JP 0.62 0.55 NA NA 0.59 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 2 0.03 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK312 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK312 LIRI 0.8 1.84 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45305 RK312 male alive C22 66 300 NA NA Included Biliary-AdenoCA LIRI JP 1 9.87 LIRI-JP::RK316 1 178702914 178762913 1 1 128 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.57 48.68 48.28 0 2 NA Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 2 137611743 137622897 1 1 128 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.57 0 96.95 0 2 NA Whitelist LIRI-JP 0.62 0 NA NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 3 187048480 187060648 1 1 128 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.57 0 99.88 0 2 NA Whitelist LIRI-JP 0.62 0.01 NA NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 4 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 5 36939945 36954043 1 1 128 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA 5 3 3 23.57 2.66 97.21 0 2 NA Whitelist LIRI-JP 0.62 0.03 NA NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 6 108425970 158281849 1 16 128 0 0 0 1 15 0.39 0 9 0 0 9 8 9 15 8 14 23.57 58.33 41.44 0 1 2 Whitelist LIRI-JP 9 0.41 0 0 0 0.59 1 Linked to high confidence LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA Canonical without polyploidization 17 0.07 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 7 NA NA 0 0 128 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.38 NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 8 30061882 79884566 1 3 128 2 0 0 0 1 0.11 0.69 3 0 0 NA NA NA NA NA NA 23.57 12.85 0 0 3 4 Whitelist LIRI-JP 0.62 0.89 0 0 0.48 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 5 0.02 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 9 5597836 123851444 79 102 128 13 20 23 23 23 0.34 0 50 0 0 50 7 10 52 7 10 23.57 63.17 19.94 0 1 2 Whitelist LIRI-JP 6 0.92 0 0 0 0.59 1 High confidence LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA With other complex events 181 0.71 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 10 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 11 132757789 132781749 1 1 128 0 1 0 0 0 0.39 0.53 1 0.04 NA NA NA NA 8 3 4 23.57 34.53 65.04 0 2 NA Whitelist LIRI-JP 0.62 0.76 0.04 NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 12 94949661 94961860 1 1 128 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 23.57 0 99.92 0 2 NA Whitelist LIRI-JP 0.62 0.33 NA NA 0.59 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 2 0.01 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 13 20044121 87942698 1 3 128 1 1 0 0 1 0.57 1 3 0 0 NA NA NA NA NA NA 23.57 28.52 54.55 0 2 1 Whitelist LIRI-JP 0.62 1 0 0 0.64 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 5 0.02 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 14 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 15 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 16 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 17 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 18 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 19 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 20 NA NA 0 0 128 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.76 NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 21 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 22 38373060 38911041 2 2 128 0 0 1 1 0 0.57 0.67 3 NA 0 NA NA NA NA NA NA 23.57 64.19 0.92 0 1 2 Whitelist LIRI-JP 0.68 0.87 NA 0 0.64 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 4 0.02 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK316 X NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 1 No LIRI-JP RK316 LIRI 0.33 2.11 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45307 RK316 female deceased C22 54 240 NA NA Included Biliary-AdenoCA LIRI JP 1 7.89 LIRI-JP::RK317 1 8501230 163895633 1 4 27 2 0 0 2 0 0.26 0.02 1 0 0 NA NA NA NA NA NA 5.35 0 100 0 2 NA Whitelist LIRI-JP 0.62 0.07 0 0 0.59 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 8 0.15 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 2 149863963 240865679 1 2 27 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 5.35 0 99.9 0 2 NA Whitelist LIRI-JP 0.68 1 NA 0 0.64 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 4 0.07 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 3 5285466 139306434 1 2 27 2 0 0 0 0 0.11 0.12 1 0 0 NA NA NA NA NA NA 5.35 0 99.88 0 2 NA Whitelist LIRI-JP 0.54 0.3 0 0 0.48 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 4 0.07 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 4 179104700 190849320 1 2 27 2 0 0 0 0 0.11 0.7 1 NA 0 NA NA NA NA NA NA 5.35 0 99.83 0 2 NA Whitelist LIRI-JP 0.54 0.9 NA 0 0.48 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 4 0.07 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 5 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 6 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 7 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 8 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 9 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 10 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 12 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 16 47446647 87553683 1 2 27 0 1 0 1 0 0.57 0.16 1 NA 0 NA NA NA NA NA NA 5.35 0 99.89 0 2 NA Whitelist LIRI-JP 0.68 0.37 NA 0 0.64 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 4 0.07 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 17 2036931 57986880 1 3 27 0 3 0 0 0 0.03 0.01 3 0 0 NA NA NA NA NA NA 5.35 0.03 99.94 0 2 5 Whitelist LIRI-JP 0.41 0.03 0 0 0.33 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 6 0.11 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 0 0 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK317 X 138531073 138612162 1 1 27 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 5.35 100 0 0 1 NA Whitelist LIRI-JP 0.62 0.64 NA NA 0.59 0 No LIRI-JP RK317 LIRI 0.35 1.93 Biliary-AdenoCA NA 2 0.04 NA 2 LIRI-JP DO45309 RK317 male deceased C22 73 30 NA NA Included Biliary-AdenoCA LIRI JP 1 0.99 LIRI-JP::RK326 1 187546666 187557492 1 1 49 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 5 0 3 40.58 62.21 34.81 0 2 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 2 29049600 226065742 1 6 49 3 3 0 0 0 0.11 0.01 5 0 0 5 5 5 7 5 5 40.58 0.48 99.43 0 2 1 Whitelist LIRI-JP 0.54 0.03 0 0 0.48 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 12 0.12 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 3 NA NA 0 0 49 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.5 NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 4 140804072 148901739 1 1 49 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 40.58 95.74 4.24 0 1 2 Whitelist LIRI-JP 0.62 0.93 NA NA 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 5 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 6 66722648 71920231 1 4 49 1 0 1 1 1 0.8 0.01 7 0 0 7 4 6 13 4 6 40.58 92.25 7.6 0 1 2 Whitelist LIRI-JP 0.68 0.04 0 0 0.84 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 7 0.07 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 7 7065611 151452855 1 4 49 1 1 0 1 1 0.8 0.02 7 0.09 0 7 3 5 10 3 5 40.58 87.3 12.48 0 3 0 Whitelist LIRI-JP 0.68 0.07 0.09 0 0.84 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 7 0.07 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 8 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 9 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 10 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 11 2116978 3456020 5 7 49 1 1 1 2 2 0.9 0 6 0.01 0 6 3 6 14 4 11 40.58 2.3 97.27 0 2 3 Whitelist LIRI-JP 0.96 0 0.01 0 0.92 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 12 0.12 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 12 23254298 112416507 1 2 49 0 2 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 40.58 0.03 99.89 0 2 3 Whitelist LIRI-JP 0.54 1 NA 0 0.48 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 4 0.04 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 13 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 14 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 15 94755313 94770216 1 1 49 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA 7 3 3 40.58 99.87 0 0 4 NA Whitelist LIRI-JP 0.62 0.16 NA NA 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 16 23659642 34668083 1 1 49 1 0 0 0 0 0.39 0.04 4 0 0 4 3 4 6 4 4 40.58 85.28 14.62 0 2 1 Whitelist LIRI-JP 0.62 0.14 0 0 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 17 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 1 NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 18 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 19 NA NA 0 0 49 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.84 NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 20 15231289 15436265 1 1 49 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 40.58 0.33 98.71 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 21 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 22 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 0 0 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK326 X 79729822 79751167 1 1 49 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 40.58 99.99 0.01 0 1 2 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK326 LIRI 0.36 1.84 Liver-HCC NA 2 0.02 NA 2 LIRI-JP DO50855 RK326 male alive C22 47 570 NA NA Included Liver-HCC LIRI JP 1 18.75 LIRI-JP::RK337 1 71669895 71731957 1 1 37 1 0 0 0 0 0.39 0.53 1 0 NA NA NA NA 11 4 4 53.94 96.97 0 0 1 NA Whitelist LIRI-JP 0.62 0.76 0 NA 0.59 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 2 NA NA 0 0 37 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 8 5 6 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.62 NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 3 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 4 19478922 19554867 1 1 37 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA 4 4 4 53.94 59.09 40.69 0 2 NA Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 5 12078548 116302104 1 3 37 3 0 0 0 0 0.03 0.29 11 0 0 11 3 5 15 4 4 53.94 96.33 3.53 0 4 6 Whitelist LIRI-JP 0.41 0.54 0 0 0.33 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 6 0.08 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 6 NA NA 0 0 37 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.9 NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 7 78012373 78152597 2 2 37 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 13 7 10 53.94 95.95 1.49 0 3 2 Whitelist LIRI-JP 0.68 0.06 0 0 0.64 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 8 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 9 123510264 134865146 3 3 37 0 1 1 1 0 0.8 0 8 0 0 8 4 6 18 6 12 53.94 81.11 18.22 0 2 1 Whitelist LIRI-JP 0.87 0 0 0 0.84 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 6 0.08 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 11 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 12 NA NA 0 0 37 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.89 NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 13 91499067 104870368 1 2 37 2 0 0 0 0 0.11 0.04 2 0 0 NA NA NA NA NA NA 53.94 0 85.83 0 2 NA Whitelist LIRI-JP 0.54 0.13 0 0 0.48 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 4 0.05 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 14 57181336 104448246 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 53.94 40.06 44.03 0 2 3 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 16 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 17 80652061 80698859 1 1 37 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 53.94 99.39 0 0 5 NA Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 19 31623546 38617551 1 1 37 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 5 3 5 53.94 92.41 0 0 4 5 Whitelist LIRI-JP 0.62 0.76 NA NA 0.59 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 2 0.03 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 20 NA NA 0 0 37 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.78 NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK337 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK337 LIRI 0.38 2.75 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50857 RK337 male alive C22 72 210 NA NA Included Liver-HCC LIRI JP 1 6.91 LIRI-JP::RK338 1 238681151 243008557 2 2 17 0 0 1 1 0 0.57 0.14 4 0 0 4 4 4 7 5 6 65.67 48.09 48.94 0 2 4 Whitelist LIRI-JP 0.68 0.34 0 0 0.64 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 4 0.12 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 6 66932780 67285296 1 1 17 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.67 99.76 0 0 3 4 Whitelist LIRI-JP 0.62 1 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 8 40893450 119975682 1 3 17 0 0 1 2 0 0.3 0.01 2 0 0 NA NA NA NA NA NA 65.67 72.06 27.93 0 5 8 Whitelist LIRI-JP 0.62 0.04 0 0 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 6 0.18 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 10 98530001 98546621 1 1 17 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 65.67 99.83 0 0 3 NA Whitelist LIRI-JP 0.62 0.78 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 12 46232499 46323428 1 1 17 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 65.67 99.92 0 0 1 3 Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 14 56959298 81265519 1 1 17 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 65.67 22.64 76.44 0 1 2 Whitelist LIRI-JP 0.62 0.67 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 17 29560987 29571858 1 1 17 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 65.67 99.95 0.01 0 2 3 Whitelist LIRI-JP 0.62 0.62 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 19 3422526 3453444 1 1 17 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 65.67 99.77 0.05 0 2 3 Whitelist LIRI-JP 0.62 0.53 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 21 34996261 35044043 1 1 17 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 65.67 7.38 69.97 0 2 NA Whitelist LIRI-JP 0.62 0.41 NA NA 0.59 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 2 0.06 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA NA NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LIRI-JP::RK338 X NA NA 0 0 17 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LIRI-JP NA 0.44 NA NA NA 0 No LIRI-JP RK338 LIRI 0.86 2.92 Liver-HCC NA 0 0 NA 3 LIRI-JP DO50859 RK338 male alive C22 77 180 NA NA Included Liver-HCC LIRI JP 1 5.92 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 2 52464942 52475266 1 1 20 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.92 99.9 0 0 3 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 4 162791087 163960992 1 1 20 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 90.92 97.44 0 0 1 4 Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 6 117645886 159191787 1 1 20 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 90.92 75.58 24.28 0 2 4 Whitelist LUAD-US 0.62 0.59 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 7 130564960 130701491 1 1 20 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 90.92 99.76 0 0 4 6 Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 8 129170417 129223903 1 1 20 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.92 99.99 0 0 4 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 9 9293056 9844526 1 2 20 1 1 0 0 0 0.57 0.18 3 NA 0 NA NA NA 7 4 4 90.92 84.56 12.85 0 1 2 Whitelist LUAD-US 0.68 0.4 NA 0 0.64 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 4 0.1 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 12 21630873 71673041 6 6 20 2 1 2 1 0 0.88 0 15 0 0 15 9 13 20 9 9 90.92 38.31 57.95 0 4 3 Whitelist LUAD-US 0.93 0 0 0 0.91 1 High confidence LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA After polyploidization 12 0.3 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 14 105135108 105893505 1 1 20 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA 4 3 3 90.92 96.29 0 0 4 6 Whitelist LUAD-US 0.62 0.72 NA NA 0.59 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 2 0.05 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::028e99e9-5b9a-4954-bb6e-6d4709a3cea8 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 LUAD 0.24 3.52 Lung-AdenoCA NA 0 0 NA 6 LUAD-US DO23651 TCGA-55-6986 028e99e9-5b9a-4954-bb6e-6d4709a3cea8 female alive C34.3 74 NA 2151 NA Included Lung-AdenoCA LUAD US 0 70.76 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 1 93287583 93303552 1 1 414 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 77.46 100 0 0 4 5 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 2 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 2 109182572 174881842 1 2 414 0 2 0 0 0 0.11 0 4 NA 0 4 3 4 5 3 5 77.46 99.9 0 0 4 5 Whitelist LUAD-US 0.54 0 NA 0 0.48 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 4 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 3 NA NA 0 0 414 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 0 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 4 68545090 69041725 2 2 414 0 0 1 1 0 0.57 0 2 NA 0 NA NA NA NA NA NA 77.46 99.9 0 0 3 4 Whitelist LUAD-US 0.68 0 NA 0 0.64 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 4 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 5 1264136 27017687 13 57 414 2 4 2 5 44 0.56 0 42 0 0 42 3 5 59 3 5 77.46 99.88 0 16 8 10 Whitelist LUAD-US 12_9_X 0.99 0 0 0 0.64 1 Linked to high confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 70 0.08 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 6 26318534 27718361 2 3 414 0 0 0 2 1 0.11 0 5 0 0 5 5 5 12 5 5 77.46 98.69 1.17 0 3 4 Whitelist LUAD-US 0.62 0.01 0 0 0.48 1 Linked to low confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA After polyploidization 5 0.01 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 7 13398832 23984708 2 31 414 1 1 0 0 29 0.57 0 20 0 0 20 3 4 27 5 5 77.46 97.45 0 3 4 3 Whitelist LUAD-US 12_X 0.87 0.02 0 0 0.64 1 Linked to high confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 33 0.04 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 8 89155199 132576364 2 11 414 0 0 1 1 9 0.57 0.12 16 0 0 16 6 9 35 13 13 77.46 46.66 53.23 0 4 6 Whitelist LUAD-US 9 0.87 0.3 0 0 0.64 1 Linked to high confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 13 0.02 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 9 524316 133004751 30 74 414 10 7 9 4 44 0.42 0 90 0 0 90 6 8 91 6 7 77.46 53.23 43.56 11 8 6 Whitelist LUAD-US 12_6_8_X 0.77 0 0 0 0.63 1 Low confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 104 0.13 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 10 25034923 38224594 3 3 414 0 2 1 0 0 0.3 0 7 0 0 7 6 7 8 7 8 77.46 96.57 0 2 3 4 Whitelist LUAD-US 0.62 0.01 0 0 0.59 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 6 0.01 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 11 28698929 28717316 1 1 414 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 77.46 99.57 0 0 4 NA Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 2 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 12 61686111 128942893 10 81 414 3 3 2 2 71 0.94 0 59 0 0 59 8 8 65 8 10 77.46 58.62 41.3 40 4 2 Whitelist LUAD-US 8_9_X 0.68 0 0 0 0.96 1 High confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 91 0.11 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 13 NA NA 0 0 414 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 0 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 14 NA NA 0 0 414 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 0 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 15 22788688 22864016 1 2 414 0 1 0 0 1 0.39 0.77 1 0 NA NA NA NA 6 6 6 77.46 51.99 43.24 0 3 NA Whitelist LUAD-US 0.68 0.93 0 NA 0.59 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 3 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 16 NA NA 0 0 414 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 0 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 17 29152576 29168917 1 1 414 0 0 1 0 0 0.39 0.01 2 NA NA NA NA NA 12 4 4 77.46 95.46 0 0 4 5 Whitelist LUAD-US 0.62 0.04 NA NA 0.59 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 2 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 18 NA NA 0 0 414 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 0 0 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 19 14859949 58216996 41 51 414 7 9 12 13 10 0.53 0 64 0 0 64 4 5 65 4 4 77.46 42.37 48.8 4 8 5 Whitelist LUAD-US 12_X 0.64 0 0 0 0.64 1 Low confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 92 0.11 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 20 29645223 62321445 1 7 414 1 1 1 1 3 1 0.73 8 0 0 8 3 6 10 3 6 77.46 51.76 41.12 0 4 5 Whitelist LUAD-US X 0.77 0.91 0 0 1 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 11 0.01 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 21 23404681 28244119 4 13 414 1 0 0 3 9 0.11 0 10 0 0 10 3 3 17 6 6 77.46 77.35 0 0 9 4 Whitelist LUAD-US X 0.68 0 0 0 0.48 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 17 0.02 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 22 28818490 43437431 1 8 414 1 1 1 0 5 0.8 0.17 10 0 0 10 9 10 11 9 9 77.46 22.13 77.87 0 2 3 Whitelist LUAD-US 6 1 0.38 0 0 0.84 1 No LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA NA 11 0.01 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 X 1621688 36004057 42 122 414 11 10 10 11 80 0.99 0 56 0 0 56 8 16 74 8 16 77.46 79.4 17.12 7 2 3 Whitelist LUAD-US 12_8_9 0.68 0 0 0 1 1 High confidence LUAD-US 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 LUAD 0.48 3.84 Lung-AdenoCA With other complex events 164 0.2 NA 115 LUAD-US DO26062 TCGA-50-6597 0d66bf6c-eed0-4726-bd5b-3bf6d610b4e0 female alive C34.3 79 NA 1015 NA Included Lung-AdenoCA LUAD US 0 33.39 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 1 11726537 234740183 1 13 350 7 3 0 2 1 0.03 0.69 44 0 0 44 6 9 45 6 9 53.3 68.12 28.91 38 3 2 Whitelist LUAD-US 0.5 0.89 0 0 0.36 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 25 0.04 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 2 140937232 142674891 2 4 350 1 3 0 0 0 0.11 0.07 12 0 0 12 5 6 62 8 8 53.3 76.61 20.67 6 4 5 Whitelist LUAD-US 0.54 0.2 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 8 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 3 84403892 164988872 7 9 350 1 3 1 2 2 0.67 0.25 33 0 0 33 9 15 46 9 15 53.3 32.52 64.32 26 5 2 Whitelist LUAD-US 0.85 0.49 0 0 0.74 1 High confidence LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA With other complex events 16 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 4 82923871 100387681 1 2 350 0 2 0 0 0 0.11 0 4 0 0 4 3 4 12 5 7 53.3 36.42 63.54 0 2 3 Whitelist LUAD-US 0.54 0.01 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 5 58876157 170708769 1 4 350 2 2 0 0 0 0.26 0.05 16 0 0 16 5 8 20 6 9 53.3 1.05 98.83 21 2 1 Whitelist LUAD-US 0.62 0.16 0 0 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 8 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 6 150690573 155451699 4 4 350 0 2 1 1 0 0.57 0.37 4 0 0 4 4 4 21 5 5 53.3 34.44 62.59 0 2 3 Whitelist LUAD-US 0.68 0.62 0 0 0.64 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 8 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 7 659658 90685325 1 6 350 2 4 0 0 0 0.06 0.02 21 0 0 21 5 7 24 7 8 53.3 35.86 61.38 29 3 2 Whitelist LUAD-US 0.54 0.07 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 12 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 8 56923598 143961644 9 22 350 2 2 3 2 13 0.95 0 25 0 0 25 4 5 32 5 5 53.3 72.67 27.33 21 3 4 Whitelist LUAD-US 20 0.68 0 0 0 0.97 1 Low confidence LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA With other complex events 31 0.04 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 9 10032107 139557348 1 9 350 1 2 0 1 5 0.57 0.89 9 0 0 9 7 9 12 7 7 53.3 6.32 93.58 9 2 3 Whitelist LUAD-US 0.85 1 0 0 0.64 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 13 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 10 5023804 115738024 1 10 350 1 5 0 1 3 0.04 0.44 27 0 0 27 6 9 30 6 6 53.3 60.46 39.36 28 3 2 Whitelist LUAD-US 0.47 0.69 0 0 0.38 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 17 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 11 18224607 111956868 1 8 350 2 3 1 0 2 0.34 1 29 0 0 29 5 9 32 6 9 53.3 81.53 14.88 37 3 4 Whitelist LUAD-US 0.87 1 0 0 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 14 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 12 98048180 99665443 2 2 350 0 2 0 0 0 0.11 0.31 2 0 0 NA NA NA 21 3 6 53.3 94.66 1.67 2 3 4 Whitelist LUAD-US 0.54 0.56 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 13 30424355 100177240 1 8 350 1 1 0 0 6 0.57 0.03 24 0 0 24 8 11 30 8 14 53.3 100 0 15 4 6 Whitelist LUAD-US 2_6 0.54 0.1 0 0 0.64 1 Linked to low confidence LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA With other complex events 10 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 14 33787461 97407133 6 12 350 3 2 1 0 6 0.34 0 36 0 0 36 5 10 45 5 10 53.3 71.38 12.71 27 5 3 Whitelist LUAD-US 13 0.83 0 0 0 0.59 1 Low confidence LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA With other complex events 18 0.03 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 15 37510079 90726252 1 7 350 1 2 0 0 4 0.3 0.87 8 0 0 8 3 6 10 3 5 53.3 33.28 66.72 11 2 3 Whitelist LUAD-US 0.62 1 0 0 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 10 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 16 6867955 79222738 1 8 350 3 4 0 0 1 0.06 0.4 16 0 0 16 7 16 17 7 7 53.3 28.19 71.5 10 2 1 Whitelist LUAD-US 0.54 0.65 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 15 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 17 36731103 79699479 1 7 350 3 1 0 1 2 0.28 0.14 17 0 0 17 7 14 19 7 7 53.3 67.47 32.53 13 2 3 Whitelist LUAD-US 0.77 0.33 0 0 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 12 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 18 71258935 71378546 1 1 350 1 0 0 0 0 0.39 0.62 2 0 NA NA NA NA 14 4 6 53.3 27.47 67.88 7 1 2 Whitelist LUAD-US 0.62 0.83 0 NA 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 2 0 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 19 13298699 58226202 1 3 350 1 2 0 0 0 0.3 0.24 9 0 0 9 3 5 12 3 5 53.3 54.08 37.21 7 3 0 Whitelist LUAD-US 0.62 0.48 0 0 0.59 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 6 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 20 15841444 61654374 1 10 350 0 2 0 1 7 0.3 0 11 0 0 11 7 11 14 7 7 53.3 94.72 4.31 12 4 3 Whitelist LUAD-US 0.68 0.03 0 0 0.59 1 Linked to low confidence LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA After polyploidization 13 0.02 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 21 10970452 21743152 2 2 350 0 2 0 0 0 0.11 0 5 0 0 5 3 4 22 6 7 53.3 43.18 27.03 1 4 7 Whitelist LUAD-US 0.54 0 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 22 27227666 39945144 4 4 350 1 3 0 0 0 0.11 0 16 0 0 16 4 6 22 4 6 53.3 80.31 18.45 1 3 5 Whitelist LUAD-US 0.54 0 0 0 0.48 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 8 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::0df573ee-28f0-4244-b434-09e6ca59fbf0 X 109171408 120451167 1 2 350 1 1 0 0 0 0.57 0.01 4 0 0 4 3 4 6 3 4 53.3 95.81 0.58 0 1 0 Whitelist LUAD-US 0.68 0.03 0 0 0.64 1 No LUAD-US 0df573ee-28f0-4244-b434-09e6ca59fbf0 LUAD 0.42 2.67 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25797 TCGA-67-3771 0df573ee-28f0-4244-b434-09e6ca59fbf0 female alive C34.1 77 NA 610 NA Included Lung-AdenoCA LUAD US 0 20.07 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 1 16489603 241069563 1 4 37 2 2 0 0 0 0.26 0.21 4 0 0 4 4 4 4 4 4 89.17 96.64 0 0 3 4 Whitelist LUAD-US 0.62 0.44 0 0 0.59 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 8 0.11 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 2 20776660 73183532 1 2 37 0 2 0 0 0 0.11 0.55 3 0 0 NA NA NA 4 3 3 89.17 97.3 0 0 4 6 Whitelist LUAD-US 0.54 0.78 0 0 0.48 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 4 0.05 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 3 4682956 66047379 1 3 37 0 2 1 0 0 0.3 0.74 3 0.01 0 NA NA NA NA NA NA 89.17 99.95 0 0 3 5 Whitelist LUAD-US 0.62 0.91 0.01 0 0.59 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 6 0.08 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 4 1892142 75598167 1 2 37 1 1 0 0 0 0.57 1 1 NA 0.04 NA NA NA NA NA NA 89.17 99.9 0 0 4 NA Whitelist LUAD-US 0.68 1 NA 0.04 0.64 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 4 0.05 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 5 8302371 171108221 1 4 37 1 1 0 0 2 0.57 0.29 1 0 0 NA NA NA NA NA NA 89.17 99.84 0 0 4 NA Whitelist LUAD-US 0.68 0.54 0 0 0.64 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 6 0.08 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 6 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 7 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 8 74314001 124370761 1 3 37 1 2 0 0 0 0.3 0.44 1 0 0 NA NA NA NA NA NA 89.17 99.87 0 0 4 NA Whitelist LUAD-US 0.62 0.68 0 0 0.59 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 6 0.08 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 9 NA NA 0 0 37 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.86 NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 10 120783772 120804176 2 2 37 1 1 0 0 0 0.57 0.09 1 0 0 NA NA NA NA NA NA 89.17 99.92 0 0 3 NA Whitelist LUAD-US 0.68 0.25 0 0 0.64 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 4 0.05 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 11 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 14 38300950 82564333 1 3 37 0 3 0 0 0 0.03 0.11 2 0 0 NA NA NA NA NA NA 89.17 0.05 99.95 0 2 3 Whitelist LUAD-US 0.41 0.28 0 0 0.33 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 6 0.08 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 16 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 17 63700894 64188356 1 1 37 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 5 4 4 89.17 95.54 0 0 4 5 Whitelist LUAD-US 0.62 0.22 NA NA 0.59 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 2 0.03 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 19 1281479 1687405 1 2 37 0 1 0 1 0 0.57 0.16 3 NA 0 NA NA NA NA NA NA 89.17 99.83 0 0 3 4 Whitelist LUAD-US 0.68 0.37 NA 0 0.64 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 4 0.05 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 20 3117254 60836750 1 2 37 0 2 0 0 0 0.11 0.19 4 NA 0.04 4 4 4 5 5 5 89.17 99.83 0 0 3 4 Whitelist LUAD-US 0.54 0.41 NA 0.04 0.48 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 4 0.05 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 21 22093195 22178908 1 1 37 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 89.17 70.37 0 0 4 NA Whitelist LUAD-US 0.62 0.62 NA NA 0.59 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 2 0.03 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::1ab7ad70-0f80-41d8-8efa-3baebc8223cc X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 1ab7ad70-0f80-41d8-8efa-3baebc8223cc LUAD 0.62 3.22 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO24646 TCGA-64-1680 1ab7ad70-0f80-41d8-8efa-3baebc8223cc male alive C34.8 63 NA 1126 NA Included Lung-AdenoCA LUAD US 0 37.04 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 1 49102664 65506443 1 2 71 0 2 0 0 0 0.11 0.82 1 0 0 NA NA NA 4 3 3 84.97 99.98 0 4 4 NA Whitelist LUAD-US 0.54 0.96 0 0 0.48 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 4 0.03 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 2 142018235 142853377 2 2 71 2 0 0 0 0 0.11 0.01 2 0 0 NA NA NA 11 9 9 84.97 99.89 0 1 3 4 Whitelist LUAD-US 0.54 0.04 0 0 0.48 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 4 0.03 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 3 4440845 174192755 1 8 71 2 4 0 0 2 0.06 0.03 8 0 0 8 3 6 9 3 7 84.97 99.78 0.17 14 3 4 Whitelist LUAD-US 0.54 0.12 0 0 0.48 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 14 0.1 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 4 92374063 92668672 1 1 71 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 5 3 3 84.97 99.87 0 1 3 4 Whitelist LUAD-US 0.62 0.84 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 5 89088604 89101071 1 1 71 0 0 1 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 84.97 99.86 0 3 3 NA Whitelist LUAD-US 0.62 0.33 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 6 73488796 86424399 1 2 71 2 0 0 0 0 0.11 0.45 3 NA 0 NA NA NA NA NA NA 84.97 99.86 0 5 4 3 Whitelist LUAD-US 0.54 0.69 NA 0 0.48 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 4 0.03 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 7 71490540 130140629 1 5 71 1 1 1 1 1 1 0 8 0 0 8 3 6 15 4 7 84.97 48.97 48.4 1 4 2 Whitelist LUAD-US 0.93 0.02 0 0 1 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 9 0.06 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 8 17635268 91141550 1 4 71 1 2 0 0 1 0.3 0.78 3 0 0 NA NA NA NA NA NA 84.97 98.44 1.55 2 4 2 Whitelist LUAD-US 0.68 0.94 0 0 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 7 0.05 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 9 9446702 22461735 1 2 71 2 0 0 0 0 0.11 0.76 4 0.14 0 4 4 4 6 5 5 84.97 50.98 48.7 0 0 2 Whitelist LUAD-US 0.54 0.92 0.14 0 0.48 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 4 0.03 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 10 19536244 132594067 1 3 71 1 2 0 0 0 0.3 0.57 4 0 0 4 3 4 5 3 3 84.97 99.82 0 6 3 1 Whitelist LUAD-US 0.62 0.79 0 0 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 6 0.04 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 11 NA NA 0 0 71 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.51 NA NA NA 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 12 78600376 110739678 1 4 71 1 2 0 0 1 0.3 0.05 4 0 0 4 3 4 5 3 5 84.97 99.92 0 0 4 6 Whitelist LUAD-US 0.62 0.16 0 0 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 7 0.05 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 13 20510674 94873864 1 3 71 2 1 0 0 0 0.3 0.74 6 0.05 0 6 4 6 7 5 5 84.97 100 0 8 4 3 Whitelist LUAD-US 0.62 0.91 0.05 0 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 6 0.04 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 14 37700548 37820161 1 1 71 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 5 5 84.97 96.32 0 0 3 4 Whitelist LUAD-US 0.62 0.9 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 16 78216838 78387682 1 1 71 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.97 99.72 0.19 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 17 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 18 26868206 26885320 1 1 71 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 84.97 99.96 0 0 3 NA Whitelist LUAD-US 0.62 0.9 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 19 1167834 46543672 1 9 71 1 0 0 2 6 0.3 0 9 0 0 9 5 6 10 5 6 84.97 31.72 68.11 6 2 4 Whitelist LUAD-US 0.85 0 0 0 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 12 0.08 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 20 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 21 20201781 20218606 1 1 71 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 84.97 77.65 0 0 4 NA Whitelist LUAD-US 0.62 0.81 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 22 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::21fb46f9-4bbb-441c-af19-a687e9138344 X 10084161 10476995 1 1 71 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 84.97 0 100 1 2 NA Whitelist LUAD-US 0.62 0.51 NA NA 0.59 0 No LUAD-US 21fb46f9-4bbb-441c-af19-a687e9138344 LUAD 0.49 3.42 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO25622 TCGA-49-6742 21fb46f9-4bbb-441c-af19-a687e9138344 male alive C34.1 70 NA 1678 NA Included Lung-AdenoCA LUAD US 0 55.2 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 1 NA NA 0 0 59 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 0 NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 2 NA NA 0 0 59 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.47 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 3 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 4 NA NA 0 0 59 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.41 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 5 176760137 176831253 1 1 59 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 0.56 0 99.87 0 2 NA Whitelist LUAD-US 0.62 0.4 NA NA 0.59 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 6 43729834 43835691 1 1 59 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 0.56 0 99.86 0 2 NA Whitelist LUAD-US 0.62 1 0 NA 0.59 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 7 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 8 98127574 98143046 1 1 59 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 0.56 0 99.99 0 2 NA Whitelist LUAD-US 0.62 0.62 NA NA 0.59 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 9 21974909 21996332 1 1 59 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 0.56 0 99.86 0 2 NA Whitelist LUAD-US 0.62 0.91 NA NA 0.59 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 10 NA NA 0 0 59 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.76 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 11 127993055 128016848 2 2 59 1 1 0 0 0 0.57 0.2 1 0 0 NA NA NA NA NA NA 0.56 0 99.57 0 2 NA Whitelist LUAD-US 0.68 0.42 0 0 0.64 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 12 NA NA 0 0 59 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.76 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 15 NA NA 0 0 59 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.88 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 16 NA NA 0 0 59 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.87 NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 17 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 19 NA NA 0 0 59 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.11 0.01 NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b 22 19713758 19746617 1 1 59 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 0.56 0 100 0 2 NA Whitelist LUAD-US 0.62 0.75 NA NA 0.59 1 No LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b X 14068417 40674197 31 32 59 3 8 10 10 1 0.24 0 11 0 0 11 11 11 11 11 11 0.56 0.94 99.06 1 2 1 Whitelist LUAD-US 0.62 0 0 0 0.59 1 High confidence LUAD-US 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b LUAD 0.17 2 Lung-AdenoCA Canonical without polyploidization 63 0.53 nonsynonymous_SNV,17_7578235_A_T,CN:2 2 LUAD-US DO25927 TCGA-55-8299 2cd8ea73-cb3f-4b17-9b97-fa12eb03b85b female alive C34.1 61 NA 216 NA Included Lung-AdenoCA LUAD US 0 7.11 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 1 14760541 105675266 4 5 276 0 1 1 2 1 0.57 0 13 0 0 13 6 13 48 8 10 93.52 100 0 2 4 5 Whitelist LUAD-US 0.68 0.02 0 0 0.64 0 Linked to low confidence LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA With other complex events 9 0.02 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 2 141983404 237479460 11 31 276 0 6 2 3 20 0.08 0 34 0 0 34 4 8 51 6 10 93.52 97.3 0 5 6 7 Whitelist LUAD-US 1 0.54 0 0 0 0.48 0 Low confidence LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA With other complex events 42 0.08 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 3 25951079 170532077 1 6 276 2 1 1 0 2 0.57 0.01 9 0 0 9 4 5 14 5 6 93.52 99.86 0 4 4 5 Whitelist LUAD-US 0.93 0.06 0 0 0.64 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 4 45230532 91257023 1 6 276 0 2 0 0 4 0.11 0.15 7 0 0 7 3 5 14 5 5 93.52 99.99 0 0 4 3 Whitelist LUAD-US 0.68 0.35 0 0 0.48 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 5 24890756 54180742 10 12 276 3 2 2 3 2 0.94 0.01 10 0 0 10 0 4 23 4 5 93.52 97.3 0 7 5 6 Whitelist LUAD-US 0.93 0.03 0 0 0.96 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 6 119367790 119930421 1 1 276 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 8 7 7 93.52 99.88 0 0 4 NA Whitelist LUAD-US 0.62 0 0 NA 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 7 89436461 145515031 3 24 276 0 1 2 0 21 0.3 0 24 0 0 24 3 8 32 3 8 93.52 99.76 0 6 8 9 Whitelist LUAD-US 1_16 0.68 0 0 0 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 27 0.05 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 8 77531110 82750414 3 4 276 0 2 1 0 1 0.3 0.07 9 0 0 9 3 5 31 3 5 93.52 96.48 0 0 14 17 Whitelist LUAD-US 0.68 0.21 0 0 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 9 NA NA 0 0 276 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.02 NA NA NA 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 10 20121711 20199634 1 1 276 0 0 0 1 0 0.39 0 2 0 NA NA NA NA 5 5 5 93.52 99.82 0 0 4 5 Whitelist LUAD-US 0.62 0.01 0 NA 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 11 NA NA 0 0 276 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 12 4 6 0 0 0 0 0 0 Whitelist LUAD-US NA 0.03 0 NA NA 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 12 82786328 83130033 1 1 276 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 13 5 7 93.52 99.92 0 0 4 5 Whitelist LUAD-US 0.62 1 0 NA 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 13 29047553 51476883 1 5 276 0 1 1 1 2 0.8 1 5 0 0 5 3 5 10 5 5 93.52 99.81 0 0 4 3 Whitelist LUAD-US 0.93 1 0 0 0.84 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 14 59911041 68078436 11 27 276 2 4 2 3 16 0.8 0 11 0 0 11 3 7 40 4 9 93.52 92.66 6.43 0 4 5 Whitelist LUAD-US 0.93 0 0 0 0.84 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 38 0.07 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 15 22992159 85179211 1 5 276 0 1 1 1 2 0.8 1 10 0 0 10 4 5 11 4 5 93.52 76.04 23.86 1 3 4 Whitelist LUAD-US 0.62 1 0 0 0.84 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 16 23990840 50896672 2 10 276 0 2 2 0 6 0.26 0 12 0 0 12 8 12 19 8 8 93.52 99.91 0 2 6 5 Whitelist LUAD-US 0.62 0 0 0 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 17 NA NA 0 0 276 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.14 NA NA NA 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 18 18573755 77402934 8 10 276 2 3 2 1 2 0.8 0 15 0 0 15 5 9 21 5 5 93.52 91.18 3.36 2 4 5 Whitelist LUAD-US 0.68 0 0 0 0.84 0 Low confidence LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 19 NA NA 0 0 276 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 0 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0 0 NA NA 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 20 40185714 40373514 1 1 276 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA 8 3 3 93.52 92.94 0 0 5 NA Whitelist LUAD-US 0.62 0.54 NA NA 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 21 33339596 40641658 1 3 276 0 0 0 1 2 0.39 0.4 4 0 0 4 0 4 9 3 5 93.52 70.48 0 0 5 4 Whitelist LUAD-US 0.87 0.65 0 0 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 22 NA NA 0 0 276 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.8 NA NA NA 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::31c96e35-5e2f-429c-b12a-7bc5a497a300 X 67258250 107769254 3 8 276 2 0 1 0 5 0.3 0.58 7 0 0 7 3 6 10 5 6 93.52 96.64 0.2 1 3 4 Whitelist LUAD-US 0.87 0.8 0 0 0.59 0 No LUAD-US 31c96e35-5e2f-429c-b12a-7bc5a497a300 LUAD 0.49 4.79 Lung-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7579373_T_C,CN:3 5 LUAD-US DO25847 TCGA-05-4398 31c96e35-5e2f-429c-b12a-7bc5a497a300 female alive C34.1 47 NA 1431 NA Included Lung-AdenoCA LUAD US 0 47.07 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 1 8896204 43079133 3 3 208 1 0 1 1 0 0.8 0.61 6 0 0 6 4 6 23 5 5 50.43 63.22 36.78 13 3 4 Whitelist LUAD-US 0.87 0.82 0 0 0.84 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 6 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 2 37042117 178187945 1 3 208 2 1 0 0 0 0.3 0 2 0 0 NA NA NA NA NA NA 50.43 99.9 0.01 25 2 3 Whitelist LUAD-US 0.62 0 0 0 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 6 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 3 59994121 162021561 1 3 208 1 1 1 0 0 0.8 0.08 4 0 0 4 4 4 7 5 5 50.43 3.5 96.47 4 2 3 Whitelist LUAD-US 0.87 0.22 0 0 0.84 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 6 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 4 26823005 114995736 1 2 208 0 2 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 50.43 99.98 0 17 3 4 Whitelist LUAD-US 0.54 0 NA 0 0.48 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 5 78381 54831894 57 71 208 16 18 13 10 14 0.46 0 109 0 0 109 5 10 110 5 10 50.43 50.07 49.81 27 2 3 Whitelist LUAD-US 0.9 0 0 0 0.64 1 Low confidence LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA With other complex events 128 0.31 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 6 47356012 90470309 1 3 208 0 3 0 0 0 0.03 0 7 0 0 7 4 7 8 5 5 50.43 34.32 62.85 1 3 2 Whitelist LUAD-US 0.41 0.02 0 0 0.33 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 6 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 7 17140046 70300268 1 6 208 1 2 0 0 3 0.3 0.36 7 0 0 7 6 7 17 6 6 50.43 49.15 50.63 8 3 4 Whitelist LUAD-US 0.68 0.61 0 0 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 9 0.02 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 8 1027946 1892898 1 1 208 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 5 5 50.43 69.91 26.67 0 2 3 Whitelist LUAD-US 0.62 0.01 NA NA 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 2 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 9 25059373 34480645 3 3 208 2 1 0 0 0 0.3 1 5 0 0 5 5 5 13 12 13 50.43 24.52 72.36 0 2 1 Whitelist LUAD-US 0.62 1 0 0 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 6 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 10 19098446 19642934 1 1 208 0 1 0 0 0 0.39 0.01 3 NA 0 NA NA NA NA NA NA 50.43 0.4 99.42 0 2 3 Whitelist LUAD-US 0.62 0.03 NA 0 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 2 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 11 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 0 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 12 57763408 71398497 5 21 208 1 0 3 1 16 0.28 0 29 0 0 29 4 5 54 7 7 50.43 45.74 50.52 4 3 4 Whitelist LUAD-US 5_7 0.84 0 0 0 0.59 1 Linked to low confidence LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA With other complex events 26 0.06 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 13 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 0 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 14 79490263 84803102 1 1 208 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA 5 3 3 50.43 61.94 22.15 0 2 NA Whitelist LUAD-US 0.62 0.46 NA NA 0.59 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 2 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 15 86054478 86106544 2 2 208 0 0 1 1 0 0.57 0.14 1 NA 0 NA NA NA NA NA NA 50.43 0 100 0 2 NA Whitelist LUAD-US 0.68 0.33 NA 0 0.64 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 16 29023905 78397852 1 2 208 0 1 1 0 0 0.57 1 6 0.04 0 6 3 5 8 3 5 50.43 95.52 0 3 3 4 Whitelist LUAD-US 0.68 1 0.04 0 0.64 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 17 62686765 62786601 2 2 208 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 5 3 3 50.43 95.53 0 0 4 6 Whitelist LUAD-US 0.68 1 0 0 0.64 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 18 4223387 49884307 32 32 208 7 11 8 6 0 0.63 0 40 0 0 40 27 40 41 27 27 50.43 69.56 24.59 25 2 3 Whitelist LUAD-US 0.74 0 0 0 0.7 1 High confidence LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA Canonical without polyploidization 64 0.15 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 19 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 0 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 20 7779563 25125774 1 2 208 0 2 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 50.43 92.25 0 0 3 4 Whitelist LUAD-US 0.54 0.59 NA 0 0.48 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 21 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 0 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 22 NA NA 0 0 208 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.14 0 NA NA 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 0 0 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::35cb7841-9b09-465a-90c5-e3b8a9faad49 X 2978476 20017637 1 2 208 1 1 0 0 0 0.57 0.04 4 0.13 0.05 4 3 4 7 5 5 50.43 11.82 87.95 0 2 1 Whitelist LUAD-US 0.68 0.13 0.13 0.05 0.64 1 No LUAD-US 35cb7841-9b09-465a-90c5-e3b8a9faad49 LUAD 0.26 2.72 Lung-AdenoCA NA 4 0.01 NA 28 LUAD-US DO26280 TCGA-55-6982 35cb7841-9b09-465a-90c5-e3b8a9faad49 female deceased C34.3 79 995 NA NA Included Lung-AdenoCA LUAD US 1 32.73 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 1 218940078 231724633 3 3 170 0 1 1 1 0 0.8 0.57 5 0 0 5 3 5 21 7 7 27.18 39.03 60.97 0 3 2 Whitelist LUAD-US 0.87 0.79 0 0 0.84 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 2 6585403 242585370 1 9 170 5 3 0 0 1 0.03 0.49 19 0 0 19 9 19 19 9 9 27.18 3.96 95.95 4 2 1 Whitelist LUAD-US 0.28 0.73 0 0 0.33 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 17 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 3 55114482 97697310 27 27 170 5 9 5 8 0 0.6 0 35 0 0 35 10 16 46 10 14 27.18 11.95 87.93 0 3 2 Whitelist LUAD-US 0.7 0 0 0 0.67 1 High confidence LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA With other complex events 54 0.16 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 4 887999 127885067 1 6 170 4 2 0 0 0 0.06 0.36 12 0 0 12 5 8 15 6 10 27.18 18.1 81.67 0 2 1 Whitelist LUAD-US 0.54 0.61 0 0 0.48 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 5 43156523 167851390 1 11 170 6 2 0 0 3 0.01 0.43 20 0 0 20 7 15 21 7 7 27.18 26.3 71.02 1 2 1 Whitelist LUAD-US 7 0.62 0.68 0 0 0.16 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 19 0.06 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 6 1715943 15332733 8 8 170 3 1 3 1 0 0.57 0.14 7 0 0 7 5 7 20 7 7 27.18 6.42 93.32 0 2 3 Whitelist LUAD-US 0.68 0.34 0 0 0.64 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 16 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 7 24879565 28144857 3 3 170 1 0 1 1 0 0.8 0.03 6 0 0 6 5 6 23 6 6 27.18 75.81 21.64 0 2 1 Whitelist LUAD-US 0.87 0.1 0 0 0.84 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 8 1785505 1857915 1 1 170 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 10 8 8 27.18 19.65 80.24 0 0 1 Whitelist LUAD-US 0.62 0.17 NA NA 0.59 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 9 4921030 131320749 1 9 170 7 2 0 0 0 0 0.32 15 0 0 15 12 15 16 12 12 27.18 33.8 63.66 2 1 2 Whitelist LUAD-US 0.12 0.57 0 0 0.08 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 10 52221052 123912676 1 3 170 3 0 0 0 0 0.03 0.2 5 0 0 5 3 5 5 3 3 27.18 0.61 99.21 3 2 1 Whitelist LUAD-US 0.41 0.42 0 0 0.33 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 11 11444067 85079840 2 3 170 1 0 1 0 1 0.57 0.46 6 0 0 6 4 6 13 5 5 27.18 25.19 74.63 1 2 3 Whitelist LUAD-US 0.87 0.71 0 0 0.64 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 12 16752993 110114957 1 4 170 3 1 0 0 0 0.11 0.59 4 0 0 4 4 4 5 5 5 27.18 0.05 99.87 1 1 2 Whitelist LUAD-US 0.54 0.81 0 0 0.48 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 13 20527658 20641467 1 1 170 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 6 3 3 27.18 56.45 43.55 0 0 1 Whitelist LUAD-US 0.62 0.12 NA NA 0.59 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 14 80674733 85992479 1 1 170 0 0 1 0 0 0.39 0.05 3 NA NA NA NA NA 5 5 5 27.18 17.23 81.85 0 1 2 Whitelist LUAD-US 0.62 0.16 NA NA 0.59 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 15 39778495 95128270 1 5 170 2 2 1 0 0 0.53 0.81 11 0 0 11 7 11 12 7 7 27.18 12.14 87.86 1 2 3 Whitelist LUAD-US 0.68 0.96 0 0 0.64 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 16 53307337 89556934 1 5 170 5 0 0 0 0 0 0.81 11 0 0 11 5 10 12 5 6 27.18 1.27 97.75 0 2 1 Whitelist LUAD-US 0.1 0.95 0 0 0.07 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 17 45866671 48942234 2 2 170 2 0 0 0 0 0.11 0.81 5 0 0 5 5 5 13 7 8 27.18 58.35 37.2 0 3 2 Whitelist LUAD-US 0.54 0.96 0 0 0.48 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 18 5915701 12590396 1 2 170 1 0 1 0 0 0.57 1 4 0 0 4 4 4 5 5 5 27.18 0.48 99.49 0 1 2 Whitelist LUAD-US 0.68 1 0 0 0.64 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 19 1199158 45327092 1 4 170 2 1 1 0 0 0.57 0.4 9 0.11 0 9 3 5 10 3 3 27.18 70.36 22.37 0 1 2 Whitelist LUAD-US 0.68 0.64 0.11 0 0.64 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 20 33655670 49901495 1 2 170 2 0 0 0 0 0.11 1 4 0 0 4 4 4 7 7 7 27.18 0.43 92.36 0 1 2 Whitelist LUAD-US 0.54 1 0 0 0.48 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 21 23116507 23256981 1 1 170 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 27.18 7.36 70 0 1 2 Whitelist LUAD-US 0.62 0.9 NA NA 0.59 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b 22 29228352 29405523 1 1 170 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 27.18 100 0 0 0 1 Whitelist LUAD-US 0.62 0.9 NA NA 0.59 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::368e23f0-e573-4547-bf5a-14080baf737b X 7299261 96783458 1 4 170 3 0 0 0 1 0.03 0.29 1 0 0 NA NA NA NA NA NA 27.18 100 0 0 1 NA Whitelist LUAD-US 0.54 0.53 0 0 0.33 1 No LUAD-US 368e23f0-e573-4547-bf5a-14080baf737b LUAD 0.36 2.06 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:3 2 LUAD-US DO25189 TCGA-50-5930 368e23f0-e573-4547-bf5a-14080baf737b male deceased C34.3 47 282 NA NA Included Lung-AdenoCA LUAD US 1 9.28 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 1 185535173 207811232 1 5 356 0 1 1 0 3 0.57 0 8 0 0 8 3 6 15 4 4 25.55 27.05 72.95 0 4 2 Whitelist LUAD-US 0.68 0 0 0 0.64 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 7 0.01 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 2 71918942 213357230 1 2 356 1 1 0 0 0 0.57 0 4 NA 0 4 3 4 5 3 3 25.55 0.12 99.79 0 2 1 Whitelist LUAD-US 0.68 0 NA 0 0.64 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 4 0.01 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 3 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 4 85848002 86250668 1 1 356 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 25.55 0.21 99.53 0 2 3 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 2 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 5 NA NA 0 0 356 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 6 80317438 80352488 1 1 356 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 12 6 6 25.55 42.1 55.06 0 1 2 Whitelist LUAD-US 0.62 0 0 NA 0.59 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 2 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 7 NA NA 0 0 356 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 8 2155797 142175861 331 331 356 81 83 83 84 0 1 0 256 0 0 256 26 29 256 26 29 25.55 99.67 0.32 29 3 1 Whitelist LUAD-US 1 0 0 0 1 1 High confidence LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA With other complex events 662 0.93 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 9 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 10 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 11 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 12 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 13 114135583 114972323 1 1 356 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 25.55 0.73 99.14 0 1 2 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 2 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 14 NA NA 0 0 356 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 15 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 16 NA NA 0 0 356 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.01 NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 17 4699626 4852690 1 1 356 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 25.55 0 100 0 2 NA Whitelist LUAD-US 0.62 0.01 NA NA 0.59 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 2 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 18 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 19 9518544 38774806 1 2 356 1 1 0 0 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 25.55 99.68 0 0 1 NA Whitelist LUAD-US 0.68 0.17 NA 0 0.64 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 4 0.01 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 20 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 21 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 22 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::397d3f69-1453-4057-b177-8723eec923d1 X NA NA 0 0 356 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0 NA NA NA 1 No LUAD-US 397d3f69-1453-4057-b177-8723eec923d1 LUAD 0.91 2.16 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24130 TCGA-97-8171 397d3f69-1453-4057-b177-8723eec923d1 male alive C34.8 81 NA 107 NA Included Lung-AdenoCA LUAD US 0 3.52 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 1 20046694 20350103 1 1 166 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 8 3 7 67.66 96.71 0 0 4 6 Whitelist LUAD-US 0.62 0.01 NA NA 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 2 70005417 214498426 10 19 166 0 4 3 3 9 0.31 0 33 0 0 33 8 17 41 8 21 67.66 94.93 2.39 1 3 4 Whitelist LUAD-US 0.81 0.01 0 0 0.59 1 High confidence LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA With other complex events 29 0.09 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 3 71132342 187669800 1 6 166 2 4 0 0 0 0.06 0.36 12 0 0 12 4 8 14 4 7 67.66 91.41 5.52 0 4 3 Whitelist LUAD-US 0.54 0.61 0 0 0.48 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 4 76579659 76610933 1 3 166 0 1 0 0 2 0.39 1 1 0 0 NA NA NA 20 4 5 67.66 31.5 65.91 0 5 NA Whitelist LUAD-US 10 0.62 1 0 0 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 5 25794582 159809583 1 11 166 2 2 0 0 7 0.26 0.26 10 0 0 10 4 8 13 4 4 67.66 44.82 55.04 0 3 2 Whitelist LUAD-US 2 0.68 0.5 0 0 0.59 1 Linked to high confidence LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA With other complex events 15 0.05 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 6 1115002 56316795 2 5 166 1 1 0 0 3 0.57 0.03 17 0 0 17 5 10 22 5 6 67.66 56.22 40.98 2 5 6 Whitelist LUAD-US 11 0.93 0.12 0 0 0.64 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 7 100144386 100993473 2 2 166 1 0 1 0 0 0.57 0.49 1 0 0 NA NA NA 14 3 8 67.66 99.97 0 0 5 NA Whitelist LUAD-US 0.68 0.73 0 0 0.64 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 8 35798157 47652517 7 7 166 2 1 2 2 0 0.93 0.07 7 0 0 7 3 4 12 3 5 67.66 69.15 27.07 0 2 6 Whitelist LUAD-US 0.96 0.21 0 0 0.95 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 9 28235009 124535605 1 6 166 1 3 1 0 1 0.28 0.1 1 0 0 NA NA NA 6 3 4 67.66 99.82 0 0 3 NA Whitelist LUAD-US 0.54 0.27 0 0 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 10 2394345 125811844 1 16 166 2 4 1 0 9 0.17 0 13 0 0 13 5 6 14 5 7 67.66 94.84 1.63 0 6 4 Whitelist LUAD-US 0.68 0.01 0 0 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 23 0.07 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 11 2731857 125031424 1 12 166 0 5 0 0 7 0 0.04 10 0 0 10 5 8 10 5 8 67.66 99.84 0 1 4 5 Whitelist LUAD-US 6 0.62 0.14 0 0 0.07 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 17 0.05 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 12 3849868 124259965 1 7 166 2 4 0 1 0 0.17 0.58 12 0 0 12 5 7 14 5 7 67.66 99.81 0.11 0 5 4 Whitelist LUAD-US 0.62 0.8 0 0 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 13 43155048 63792667 1 3 166 1 1 1 0 0 0.8 0.67 6 0 0 6 3 3 11 3 7 67.66 68.24 17.61 0 2 3 Whitelist LUAD-US 0.87 0.87 0 0 0.84 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 14 43055008 96040430 1 5 166 1 1 0 0 3 0.57 0.37 6 0 0 6 6 6 7 6 6 67.66 50.35 34.65 0 2 3 Whitelist LUAD-US 0.62 0.62 0 0 0.64 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 15 70421227 70487952 1 1 166 0 1 0 0 0 0.39 0.64 2 NA NA NA NA NA 5 4 4 67.66 58.18 26.41 0 4 5 Whitelist LUAD-US 0.62 0.85 NA NA 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 16 34523490 72929262 1 5 166 1 1 1 0 2 0.8 0.09 2 0 0 NA NA NA 4 0 0 67.66 11.45 84.03 0 2 4 Whitelist LUAD-US 0.93 0.25 0 0 0.84 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 17 57927515 80484960 1 4 166 1 2 0 0 1 0.3 0.47 8 0 0 8 6 6 14 6 6 67.66 69.85 25.02 0 3 4 Whitelist LUAD-US 0.68 0.71 0 0 0.59 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 18 NA NA 0 0 166 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.59 NA NA NA 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 19 9055282 47983053 1 4 166 1 1 1 0 1 0.8 0.27 9 0.01 0 9 5 6 9 5 6 67.66 36.67 54.96 0 2 4 Whitelist LUAD-US 0.68 0.51 0.01 0 0.84 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 20 NA NA 0 0 166 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.94 NA NA NA 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 21 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 22 22925008 32403193 2 2 166 0 2 0 0 0 0.11 0.05 4 0 0 4 0 3 7 0 0 67.66 29.45 46.77 0 4 5 Whitelist LUAD-US 0.54 0.16 0 0 0.48 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::3d2aa654-1b5f-4eb4-a1c2-af31f5760069 X 9226917 24523530 1 5 166 1 4 0 0 0 0.04 0.86 10 0.02 0 10 9 10 11 9 9 67.66 1.26 98.21 0 2 3 Whitelist LUAD-US 0.45 0.99 0.02 0 0.36 1 No LUAD-US 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 LUAD 0.62 3.34 Lung-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577099_A_C,CN:2 4 LUAD-US DO24675 TCGA-05-4420 3d2aa654-1b5f-4eb4-a1c2-af31f5760069 male alive C34.3 41 NA 912 NA Included Lung-AdenoCA LUAD US 0 30 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 1 159081785 159091914 1 1 65 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA 4 3 4 50.39 96.92 0 0 4 5 Whitelist LUAD-US 0.62 0.19 NA NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 2 48843987 221008017 1 5 65 4 0 0 1 0 0.04 0.82 6 0 0 6 3 4 7 3 5 50.39 99.88 0.01 0 3 4 Whitelist LUAD-US 0.45 0.96 0 0 0.36 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 10 0.08 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 3 147968712 147978807 1 1 65 1 0 0 0 0 0.39 1 1 0.04 NA NA NA NA NA NA NA 50.39 0 99.97 0 2 NA Whitelist LUAD-US 0.62 1 0.04 NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 4 41406172 177759564 1 4 65 3 1 0 0 0 0.11 0.45 8 0 0 8 4 5 11 4 6 50.39 32.1 67.69 3 2 4 Whitelist LUAD-US 0.54 0.69 0 0 0.48 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 8 0.06 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 5 32074021 60967062 1 6 65 1 1 0 0 4 0.57 0.13 5 0 0 5 4 5 8 5 5 50.39 33.28 66.6 0 2 4 Whitelist LUAD-US 0.62 0.32 0 0 0.64 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 8 0.06 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 6 NA NA 0 0 65 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.53 0 NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 7 98286982 151835359 1 2 65 1 0 1 0 0 0.57 0.58 4 NA 0 4 3 4 8 3 6 50.39 97.63 0.01 1 3 2 Whitelist LUAD-US 0.68 0.81 NA 0 0.64 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 4 0.03 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 8 34939494 104080491 1 4 65 3 1 0 0 0 0.11 0.15 7 0 0 7 3 5 8 3 3 50.39 96.47 0.01 0 4 1 Whitelist LUAD-US 0.54 0.35 0 0 0.48 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 8 0.06 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 9 20532134 20554473 1 1 65 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 0 4 50.39 99.82 0.02 0 2 3 Whitelist LUAD-US 0.62 0.76 NA NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 10 42808253 42835271 1 1 65 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA 7 3 7 50.39 33.8 66.12 0 2 4 Whitelist LUAD-US 0.62 0.77 NA NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 11 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 12 24838564 25002755 1 1 65 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 50.39 0.12 99.8 0 2 4 Whitelist LUAD-US 0.62 1 0 NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 13 NA NA 0 0 65 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.9 NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 14 68810657 68983328 1 1 65 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 50.39 0 85 0 2 NA Whitelist LUAD-US 0.62 0.9 NA NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 15 81183868 81224165 1 1 65 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 50.39 0.04 84.4 0 1 2 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 2 0.02 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 16 NA NA 0 0 65 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.26 NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 17 65680545 66379056 2 2 65 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 6 4 4 50.39 17.58 82.42 0 2 NA Whitelist LUAD-US 0.68 0.04 0 0 0.64 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 4 0.03 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 18 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 19 10552133 24223673 1 2 65 1 1 0 0 0 0.57 0.14 2 0 0 NA NA NA 5 4 4 50.39 23.28 76.55 0 1 2 Whitelist LUAD-US 0.68 0.33 0 0 0.64 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 4 0.03 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 20 13646462 36916014 1 7 65 1 0 0 1 5 0.57 0 8 0 0 8 3 4 9 3 3 50.39 70.92 28.98 0 4 2 Whitelist LUAD-US 5 0.62 0 0 0 0.64 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 9 0.07 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 21 NA NA 0 0 65 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.78 NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 22 NA NA 0 0 65 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.77 NA NA NA 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::46592b7b-6968-42a6-83af-0917c9f4a9a5 X 76109043 145543488 1 4 65 4 0 0 0 0 0.01 0.38 1 0 0 NA NA NA NA NA NA 50.39 100 0 0 1 NA Whitelist LUAD-US 0.21 0.63 0 0 0.16 0 No LUAD-US 46592b7b-6968-42a6-83af-0917c9f4a9a5 LUAD 0.6 2.76 Lung-AdenoCA NA 8 0.06 stopgain,17_7578275_A_G,CN:2 2 LUAD-US DO24860 TCGA-78-7535 46592b7b-6968-42a6-83af-0917c9f4a9a5 male deceased C34.1 45 949 NA NA Included Lung-AdenoCA LUAD US 1 31.22 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 1 69316265 243480745 1 4 56 4 0 0 0 0 0.01 0.45 9 0 0 9 3 4 12 5 6 65.01 42.98 57.02 0 3 4 Whitelist LUAD-US 0.21 0.69 0 0 0.16 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 8 0.07 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 2 142222867 142239154 1 1 56 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA 4 0 3 65.01 82.14 15.16 0 3 NA Whitelist LUAD-US 0.62 0.58 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 3 60560694 168131281 1 5 56 3 0 0 1 1 0.11 0.11 5 0 0 5 3 4 5 3 4 65.01 55.83 44.03 1 2 4 Whitelist LUAD-US 0.45 0.29 0 0 0.48 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 9 0.08 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 4 56375515 182582151 1 2 56 2 0 0 0 0 0.11 0.79 4 0 0 4 3 4 7 3 3 65.01 85.43 14.35 0 3 2 Whitelist LUAD-US 0.54 0.94 0 0 0.48 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 5 6739988 6830858 1 1 56 1 0 0 0 0 0.39 0.78 2 0 NA NA NA NA NA NA NA 65.01 99.8 0.05 0 2 3 Whitelist LUAD-US 0.62 0.93 0 NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 6 162518330 162707468 2 2 56 2 0 0 0 0 0.11 0.58 3 0 0 NA NA NA 9 3 3 65.01 34.01 62.72 0 0 1 Whitelist LUAD-US 0.54 0.8 0 0 0.48 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 7 69947086 116662766 1 5 56 2 1 1 0 1 0.57 0.12 10 0 0 10 4 8 17 4 6 65.01 97.44 0 0 8 6 Whitelist LUAD-US 0.62 0.31 0 0 0.64 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 9 0.08 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 8 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 9 8494315 9858809 3 3 56 3 0 0 0 0 0.03 0.28 5 0.11 0 5 3 4 9 3 4 65.01 99.33 0 0 1 0 Whitelist LUAD-US 0.41 0.53 0.11 0 0.33 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 10 104982992 105012851 1 1 56 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 3 65.01 0.02 96.63 0 2 4 Whitelist LUAD-US 0.62 0.76 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 11 43566825 48849532 7 8 56 2 2 1 2 1 0.93 0 5 0 0 5 3 3 10 4 4 65.01 77.37 19.04 0 2 3 Whitelist LUAD-US 0.87 0 0 0 0.95 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 15 0.13 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 12 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 13 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 14 104822088 104987627 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 65.01 81.29 15 0 4 5 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 15 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 16 78162309 78424090 1 1 56 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 65.01 99.42 0.47 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 17 16294043 16340058 1 1 56 1 0 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 65.01 99.79 0 0 4 NA Whitelist LUAD-US 0.62 0.87 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 18 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 19 14604145 14645583 1 1 56 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.01 0.07 99.76 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 20 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed 22 NA NA 0 0 56 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.73 NA NA NA 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::4c31127e-d095-4978-9dac-35153c27f6ed X 10485359 79291098 1 3 56 2 0 0 0 1 0.11 0.76 5 NA 0 5 3 4 7 3 5 65.01 50.05 46.56 4 1 0 Whitelist LUAD-US 0.62 0.93 NA 0 0.48 0 No LUAD-US 4c31127e-d095-4978-9dac-35153c27f6ed LUAD 0.46 3.01 Lung-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7577538_G_C,CN:4 4 LUAD-US DO26230 TCGA-73-4666 4c31127e-d095-4978-9dac-35153c27f6ed female alive C34.1 52 NA 618 NA Included Lung-AdenoCA LUAD US 0 20.33 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 1 51433567 185190620 1 2 15 2 0 0 0 0 0.11 0.33 3 NA 0 NA NA NA NA NA NA 13.3 41.9 57.76 4 2 3 Whitelist LUAD-US 0.54 0.58 NA 0 0.48 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 4 0.13 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 3 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 8 7964109 129439144 4 4 15 1 0 0 3 0 0.11 0 4 0 0 4 4 4 5 5 5 13.3 99.99 0 0 1 3 Whitelist LUAD-US 0.54 0 0 0 0.48 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 8 0.27 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 10 9209122 9239531 1 1 15 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 13.3 0.02 99.8 0 2 3 Whitelist LUAD-US 0.62 0.75 NA NA 0.59 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 2 0.07 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 11 NA NA 0 0 15 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.11 0 NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 12 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.76 NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 16 NA NA 0 0 15 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.59 NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 17 54596410 54647361 1 1 15 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 13.3 0.06 99.94 0 2 3 Whitelist LUAD-US 0.62 0.59 NA NA 0.59 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 2 0.07 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::501c987e-d1eb-48a9-89eb-72a5062c90b4 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 501c987e-d1eb-48a9-89eb-72a5062c90b4 LUAD 0.88 2.08 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO24729 TCGA-78-7158 501c987e-d1eb-48a9-89eb-72a5062c90b4 female deceased C34.3 59 179 NA NA Included Lung-AdenoCA LUAD US 1 5.89 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 1 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 2 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 3 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 4 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 5 497860 23004871 1 9 44 4 1 0 0 4 0.04 0 6 0 0 6 4 4 6 4 4 14.76 2.44 97.43 6 2 3 Whitelist LUAD-US 0.62 0 0 0 0.36 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 14 0.16 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 6 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 8 78610917 146172492 14 21 44 2 3 5 4 7 0.7 0 30 0 0 30 5 7 31 5 7 14.76 42.35 57.52 4 3 4 Whitelist LUAD-US 0.84 0 0 0 0.78 1 Low confidence LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA With other complex events 35 0.4 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 9 7386426 137472472 1 2 44 1 0 0 1 0 0.57 0.69 4 NA 0 4 4 4 5 5 5 14.76 21.15 78.14 4 1 2 Whitelist LUAD-US 0.68 0.89 NA 0 0.64 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 4 0.05 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 11 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 12 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 14 NA NA 0 0 44 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.37 NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 16 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 18 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 19 3005321 54308857 11 11 44 3 2 3 3 0 0.97 0 10 0 0 10 10 10 11 11 11 14.76 26.95 72.61 1 1 2 Whitelist LUAD-US 0.98 0 0 0 0.98 1 High confidence LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA Canonical without polyploidization 22 0.25 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::61c655ec-52b5-453f-a6cc-b2aba445b027 X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 61c655ec-52b5-453f-a6cc-b2aba445b027 LUAD 0.72 2.02 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23786 TCGA-49-4486 61c655ec-52b5-453f-a6cc-b2aba445b027 male deceased C34.3 72 2318 NA NA Included Lung-AdenoCA LUAD US 1 76.25 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 1 7707288 178909658 1 3 44 1 2 0 0 0 0.3 1 5 0 0 5 3 4 7 3 4 27.29 96.71 0.31 0 3 1 Whitelist LUAD-US 0.62 1 0 0 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 6 0.07 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 2 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 3 160263568 173213909 2 2 44 1 1 0 0 0 0.57 1 1 0 0 NA NA NA 4 4 4 27.29 52.7 44.24 0 3 NA Whitelist LUAD-US 0.68 1 0 0 0.64 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 4 0.05 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 4 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 5 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 6 36439700 67549840 1 3 44 1 2 0 0 0 0.3 0.75 4 0 0 4 3 4 4 3 3 27.29 60.5 39.32 0 2 1 Whitelist LUAD-US 0.62 0.91 0 0 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 6 0.07 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 7 140110920 140192441 1 1 44 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.29 0.05 99.72 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 8 27305446 27589869 1 1 44 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.29 0 99.99 0 2 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 9 21968178 136992608 1 4 44 2 1 0 0 1 0.3 0.09 6 0 0 6 3 4 7 3 5 27.29 6.22 90.73 0 2 0 Whitelist LUAD-US 0.68 0.25 0 0 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 7 0.08 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 10 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 11 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 12 48130412 48682601 1 1 44 0 1 0 0 0 0.39 0.15 1 0 NA NA NA NA NA NA NA 27.29 0 99.92 0 2 NA Whitelist LUAD-US 0.62 0.35 0 NA 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 14 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 15 63783612 63876882 1 1 44 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.29 0 99.87 0 2 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 16 NA NA 0 0 44 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.58 NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 17 36749673 75547566 13 13 44 4 6 2 1 0 0.21 0 1 0 0 NA NA NA NA NA NA 27.29 9.36 86.2 0 2 NA Whitelist LUAD-US 0.62 0 0 0 0.59 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 26 0.3 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 18 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 19 NA NA 0 0 44 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.44 NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::63bd2175-4b7c-44c9-aef3-9efc8f79837b X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 63bd2175-4b7c-44c9-aef3-9efc8f79837b LUAD 0.62 2 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23942 TCGA-05-5429 63bd2175-4b7c-44c9-aef3-9efc8f79837b male alive C34.1 60 NA 30 NA Included Lung-AdenoCA LUAD US 0 0.99 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 1 120339139 120475018 4 4 28 2 2 0 0 0 0.26 0.01 5 0 0 5 5 5 7 7 7 74.09 99.89 0.1 0 4 2 Whitelist LUAD-US 0.62 0.03 0 0 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 8 0.14 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 3 14994831 15029120 1 1 28 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 74.09 99.81 0.02 0 2 3 Whitelist LUAD-US 0.62 0.9 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 4 87062029 87657601 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 74.09 99.81 0 0 1 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 5 58988676 172827265 1 2 28 0 0 2 0 0 0.11 0.69 7 NA 0 7 7 7 8 8 8 74.09 35.59 64.26 2 2 4 Whitelist LUAD-US 0.54 0.89 NA 0 0.48 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 4 0.07 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 6 NA NA 0 0 28 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.88 NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 7 110617649 111072398 1 1 28 1 0 0 0 0 0.39 0.66 1 NA NA NA NA NA 4 0 0 74.09 99.78 0 0 3 NA Whitelist LUAD-US 0.62 0.87 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 8 113151821 113170468 1 1 28 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 74.09 99.99 0 1 3 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 9 21901185 21986875 1 1 28 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA 10 4 6 74.09 65.89 31.03 0 0 2 Whitelist LUAD-US 0.62 0.55 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 12 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 13 NA NA 0 0 28 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.49 NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 14 45278513 45547006 1 1 28 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA 7 5 7 74.09 10.94 89.06 0 2 3 Whitelist LUAD-US 0.62 0.18 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 16 NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.39 NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 17 NA NA 0 0 28 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.77 NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 18 30564254 33520287 1 1 28 0 0 1 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 74.09 3.79 96.2 0 2 4 Whitelist LUAD-US 0.62 0.39 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::659668e8-f0d9-4ff2-bbc8-9246f2ef49ab X 74333512 74382096 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 74.09 99.77 0 0 4 5 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab LUAD 0.44 3.08 Lung-AdenoCA NA 2 0.04 NA 3 LUAD-US DO25985 TCGA-55-7281 659668e8-f0d9-4ff2-bbc8-9246f2ef49ab female alive C34.2 70 NA 18 NA Included Lung-AdenoCA LUAD US 0 0.59 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 1 16477985 208815032 1 5 113 3 1 0 0 1 0.11 1 7 0 0 7 4 7 9 4 4 25.72 48.24 51.59 8 2 3 Whitelist LUAD-US 0.62 1 0 0 0.48 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 9 0.04 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 2 189218653 189234724 1 1 113 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA 6 4 4 25.72 1.3 98.6 2 1 2 Whitelist LUAD-US 0.62 0.74 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 3 31853921 31869692 1 1 113 0 0 1 0 0 0.39 0.19 2 0 NA NA NA NA 8 3 3 25.72 94.97 1.89 0 1 2 Whitelist LUAD-US 0.62 0.42 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 4 60914545 163991323 1 2 113 2 0 0 0 0 0.11 0.45 2 0 0 NA NA NA 4 4 4 25.72 32.63 64.81 2 1 2 Whitelist LUAD-US 0.54 0.69 0 0 0.48 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 4 0.02 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 5 90154962 118543958 6 7 113 2 4 0 0 1 0.06 0.08 13 0 0 13 13 13 21 21 21 25.72 24.56 72.77 2 1 2 Whitelist LUAD-US 0.62 0.22 0 0 0.48 1 High confidence LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA Canonical without polyploidization 13 0.06 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 6 21645942 21661742 1 1 113 0 1 0 0 0 0.39 0.16 2 0.02 NA NA NA NA NA NA NA 25.72 0.01 99.85 0 2 4 Whitelist LUAD-US 0.62 0.37 0.02 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 7 7727635 153015926 1 3 113 1 2 0 0 0 0.3 1 7 0 0 7 6 7 9 7 7 25.72 8.18 89.14 7 2 3 Whitelist LUAD-US 0.62 1 0 0 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 6 0.03 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 8 27543777 27701885 1 1 113 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 25.72 0.15 99.84 0 2 NA Whitelist LUAD-US 0.62 0.32 NA NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 9 36283663 117823474 1 4 113 1 1 0 0 2 0.57 0.63 2 0 0 NA NA NA NA NA NA 25.72 0.03 99.26 2 2 3 Whitelist LUAD-US 13 0.68 0.84 0 0 0.64 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 6 0.03 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 10 NA NA 0 0 113 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.2 NA NA NA 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 11 86007822 91053003 1 3 113 2 0 0 1 0 0.3 0.82 2 0 0 NA NA NA NA NA NA 25.72 0.56 99.01 1 1 2 Whitelist LUAD-US 0.62 0.96 0 0 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 6 0.03 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 12 105609011 105624203 1 1 113 1 0 0 0 0 0.39 0.82 1 0 NA NA NA NA NA NA NA 25.72 14.18 85.74 2 2 NA Whitelist LUAD-US 0.62 0.96 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 13 19525527 93093266 1 6 113 2 0 1 1 2 0.57 0.12 9 0 0 9 6 9 11 7 7 25.72 66.87 30.33 0 1 2 Whitelist LUAD-US 0.62 0.3 0 0 0.64 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 10 0.04 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 14 NA NA 0 0 113 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.81 NA NA NA 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 15 24028054 98760287 3 7 113 1 1 0 1 4 0.8 0 10 0 0 10 10 10 11 11 11 25.72 30.97 69.03 6 1 2 Whitelist LUAD-US 0.68 0 0 0 0.84 1 High confidence LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA Canonical without polyploidization 10 0.04 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 16 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 17 72735185 73518569 1 2 113 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 17 4 4 25.72 50.64 44.4 0 2 3 Whitelist LUAD-US 0.68 0 0 0 0.64 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 4 0.02 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 18 60757147 60813877 1 1 113 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA 7 5 5 25.72 4.86 95.05 0 2 3 Whitelist LUAD-US 0.62 0.12 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 19 NA NA 0 0 113 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist LUAD-US NA 0.53 0 NA NA 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 20 5779684 5796276 1 1 113 1 0 0 0 0 0.39 0.1 1 0 NA NA NA NA 4 3 4 25.72 42.52 56.7 0 2 NA Whitelist LUAD-US 0.62 0.26 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 21 15568990 47382700 15 15 113 4 4 2 5 0 0.74 0 23 0 0 23 5 7 24 6 8 25.72 29.75 47.78 1 2 1 Whitelist LUAD-US 0.85 0 0 0 0.82 1 Low confidence LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA With other complex events 30 0.13 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 22 39783974 39794185 1 1 113 1 0 0 0 0 0.39 0.05 1 0 NA NA NA NA NA NA NA 25.72 46.27 53.73 0 2 NA Whitelist LUAD-US 0.62 0.15 0 NA 0.59 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::6dfd47d2-831a-4386-9051-f78199a16bb5 X NA NA 0 0 113 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LUAD-US NA 0.32 NA NA NA 1 No LUAD-US 6dfd47d2-831a-4386-9051-f78199a16bb5 LUAD 0.86 1.97 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7577537_-_C,CN:1 2 LUAD-US DO25320 TCGA-05-4397 6dfd47d2-831a-4386-9051-f78199a16bb5 male deceased C34.2 65 731 NA NA Included Lung-AdenoCA LUAD US 1 24.05 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 1 17767408 17798144 2 2 74 0 0 1 1 0 0.57 0.28 1 NA 0 NA NA NA 4 3 4 67.7 100 0 0 3 NA Whitelist LUAD-US 0.68 0.53 NA 0 0.64 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 2 88652587 102779867 3 4 74 0 1 1 1 1 0.8 0.83 7 0 0 7 0 4 9 3 3 67.7 95.63 4.26 2 4 5 Whitelist LUAD-US 0.68 0.97 0 0 0.84 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 3 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 4 87765098 87853013 1 1 74 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 6 3 3 67.7 26.65 70.91 0 1 2 Whitelist LUAD-US 0.62 0.48 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 5 125579334 155817692 1 2 74 2 0 0 0 0 0.11 0.33 4 NA 0 4 4 4 6 5 5 67.7 99.81 0.07 0 2 3 Whitelist LUAD-US 0.54 0.58 NA 0 0.48 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 6 NA NA 0 0 74 0 0 0 0 0 NA 0.8 NA 0.03 NA NA NA NA 10 5 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.95 0.03 NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 7 94901995 102833762 2 3 74 1 0 0 1 1 0.57 0 17 0 0 17 3 3 23 3 4 67.7 96.97 0 1 17 5 Whitelist LUAD-US 0.62 0.01 0 0 0.64 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 8 135976881 136510732 1 1 74 1 0 0 0 0 0.39 0.79 2 0 NA NA NA NA 8 3 8 67.7 68.95 27.63 0 2 3 Whitelist LUAD-US 0.62 0.94 0 NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 9 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 10 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 11 50690363 50709135 1 1 74 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 4 67.7 99.36 0.08 1 1 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 12 12276731 84320866 1 4 74 1 1 0 0 2 0.57 0.4 9 0 0 9 0 6 12 0 6 67.7 96.26 0 1 4 7 Whitelist LUAD-US 1 0.65 0 0 0.64 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 13 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 14 35729410 107108621 1 3 74 2 1 0 0 0 0.3 0.08 8 0 0 8 3 5 12 6 8 67.7 77.93 21.84 3 4 2 Whitelist LUAD-US 0.62 0.24 0 0 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 15 60153021 74051084 8 10 74 2 3 1 2 2 0.8 0 14 0 0 14 5 6 28 7 7 67.7 59.79 40.08 0 2 3 Whitelist LUAD-US 0.68 0 0 0 0.84 0 Low confidence LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA With other complex events 18 0.12 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 16 78881051 79089682 1 1 74 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA 8 3 5 67.7 99.85 0.11 1 4 NA Whitelist LUAD-US 0.62 0.33 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 17 65846641 68434989 1 2 74 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 67.7 78.26 21.74 0 4 NA Whitelist LUAD-US 0.68 0.06 0 0 0.64 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 18 NA NA 0 0 74 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.9 NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 19 28849290 54774654 3 5 74 0 1 1 1 2 0.8 0 9 0 0 9 4 9 11 4 4 67.7 10.54 82.15 3 3 2 Whitelist LUAD-US 0.93 0.02 0 0 0.84 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 20 38481164 39056389 1 1 74 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 67.7 52.38 40.57 0 3 5 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 21 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e 22 31659653 31706668 1 1 74 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 67.7 0.09 99.91 0 2 4 Whitelist LUAD-US 0.62 0.81 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::762dea8a-5b41-4058-979a-b7876ed13d7e X 41595686 41656664 1 1 74 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 67.7 99.96 0.04 0 1 2 Whitelist LUAD-US 0.62 0.41 NA NA 0.59 0 No LUAD-US 762dea8a-5b41-4058-979a-b7876ed13d7e LUAD 0.62 2.94 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 5 LUAD-US DO25444 TCGA-05-4395 762dea8a-5b41-4058-979a-b7876ed13d7e male deceased C34.1 76 0 NA NA Included Lung-AdenoCA LUAD US 1 0 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 1 2907455 219523513 1 10 229 2 1 3 1 3 0.67 0.05 16 0 0 16 8 9 16 8 9 76.91 97.03 0 0 4 5 Whitelist LUAD-US 0.68 0.16 0 0 0.74 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 2 49867462 212060375 1 6 229 3 0 0 1 2 0.11 0.01 12 0 0 12 5 12 12 5 12 76.91 97.28 0.01 0 3 4 Whitelist LUAD-US 22 0.54 0.03 0 0 0.48 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 3 193170066 193230567 1 1 229 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 76.91 99.83 0.03 0 2 3 Whitelist LUAD-US 0.62 0 NA NA 0.59 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 4 2224008 45503258 1 1 229 1 0 0 0 0 0.39 0 2 0.07 NA NA NA NA 5 5 5 76.91 97.44 0 0 3 4 Whitelist LUAD-US 0.62 0.02 0.07 NA 0.59 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 5 45314895 87768407 1 4 229 0 1 1 1 1 0.8 1 5 0 0 5 4 5 10 7 8 76.91 97.34 0 0 4 5 Whitelist LUAD-US 1 1 0 0 0.84 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 6 20553442 36852147 1 5 229 1 0 1 0 3 0.57 0.07 8 0 0 8 3 4 13 3 4 76.91 99.73 0 0 5 4 Whitelist LUAD-US 8 0.62 0.2 0 0 0.64 0 Linked to low confidence LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA With other complex events 7 0.02 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 7 10697489 56316195 5 12 229 2 4 3 1 2 0.57 0.18 13 0 0 13 3 5 15 3 5 76.91 97.43 0 0 5 3 Whitelist LUAD-US 1 0.62 0.4 0 0 0.64 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 8 19746812 144761257 34 68 229 12 6 5 11 34 0.23 0 79 0 0 79 5 8 80 5 8 76.91 84.72 11.85 2 7 8 Whitelist LUAD-US 1 0 0 0 0.59 0 Low confidence LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA With other complex events 102 0.22 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 9 12499328 140557114 1 3 229 2 1 0 0 0 0.3 0.04 1 0 0 NA NA NA NA NA NA 76.91 0 99.5 0 2 NA Whitelist LUAD-US 0.62 0.14 0 0 0.59 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 10 60424075 135078506 1 11 229 4 0 1 1 5 0.11 0.87 6 0 0 6 4 5 7 4 4 76.91 99.63 0.07 0 3 4 Whitelist LUAD-US 0.62 1 0 0 0.48 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 11 127294905 132624501 7 7 229 0 3 2 2 0 0.44 0.43 14 0 0 14 3 3 16 3 3 76.91 99.44 0 0 3 8 Whitelist LUAD-US 0.68 0.68 0 0 0.64 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 12 25319988 113988591 3 3 229 0 1 0 2 0 0.3 0.08 5 0 0 5 3 5 11 3 3 76.91 99.75 0.17 0 3 5 Whitelist LUAD-US 0.62 0.24 0 0 0.59 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 13 79231088 88529473 1 2 229 0 0 1 1 0 0.57 0.2 6 0 0 6 0 3 7 3 3 76.91 85.85 0 0 3 7 Whitelist LUAD-US 0.68 0.43 0 0 0.64 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 14 NA NA 0 0 229 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.79 NA NA NA 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 15 34230897 34248911 1 1 229 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 76.91 0 84.48 0 2 NA Whitelist LUAD-US 0.62 0.09 NA NA 0.59 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 16 49268054 62168100 4 5 229 0 2 1 1 1 0.57 0.22 4 0 0 4 4 4 11 7 11 76.91 10.86 89.05 15 2 3 Whitelist LUAD-US 0.68 0.45 0 0 0.64 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 17 18917497 78501499 23 45 229 6 4 6 7 22 0.84 0 46 0 0 46 4 9 49 4 7 76.91 67 31.99 4 6 4 Whitelist LUAD-US 8 0.68 0 0 0 0.88 0 Low confidence LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA With other complex events 68 0.15 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 18 NA NA 0 0 229 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.13 NA NA NA 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 19 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 20 NA NA 0 0 229 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 21 NA NA 0 0 229 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.93 NA NA NA 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 22 30205853 44783728 3 21 229 0 2 0 1 18 0.3 0 23 0 0 23 5 5 31 6 6 76.91 65.59 10.63 0 3 4 Whitelist LUAD-US 8 0.89 0 0 0 0.59 0 Linked to low confidence LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA With other complex events 24 0.05 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::97831d28-ab41-4c18-bfc2-c4c6bc757d13 X 32425942 37507683 2 2 229 1 1 0 0 0 0.57 0.1 4 0 0 4 4 4 8 4 4 76.91 1.29 98.48 0 2 3 Whitelist LUAD-US 0.68 0.26 0 0 0.64 0 No LUAD-US 97831d28-ab41-4c18-bfc2-c4c6bc757d13 LUAD 0.82 3.49 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7579358_A_C,CN:2 3 LUAD-US DO23584 TCGA-91-6847 97831d28-ab41-4c18-bfc2-c4c6bc757d13 female alive C34.3 62 NA 842 NA Included Lung-AdenoCA LUAD US 0 27.7 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 1 194754133 247990684 73 73 209 21 18 18 16 0 0.87 0 79 0 0 79 5 9 93 6 11 93.19 100 0 6 6 7 Whitelist LUAD-US 0.93 0 0 0 0.91 1 Low confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA With other complex events 146 0.35 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 2 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 3 117192757 117612961 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 93.19 99.76 0.21 0 2 3 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 2 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 4 182866748 183709472 2 2 209 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 7 7 7 93.19 99.75 0 0 4 3 Whitelist LUAD-US 0.54 0.02 0 0 0.48 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 5 93236593 164106978 1 2 209 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 93.19 99.88 0 0 4 NA Whitelist LUAD-US 0.54 0.01 0 0 0.48 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 6 25643631 42924741 2 4 209 0 0 2 2 0 0.26 0.24 7 0 0 7 5 7 11 5 6 93.19 96.99 0 0 6 5 Whitelist LUAD-US 0.62 0.48 0 0 0.59 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 8 0.02 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 7 27678717 58038295 6 6 209 2 1 1 2 0 0.88 0.16 14 0 0 14 5 5 21 7 9 93.19 97.43 0 0 7 6 Whitelist LUAD-US 0.93 0.37 0 0 0.91 1 Low confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA With other complex events 12 0.03 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 8 89969077 90014363 1 1 209 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 93.19 96.58 0 0 5 6 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 2 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 9 8653380 9684106 1 2 209 1 1 0 0 0 0.57 0.02 4 NA 0 4 3 4 7 3 3 93.19 99.3 0 0 4 3 Whitelist LUAD-US 0.68 0.08 NA 0 0.64 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 10 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 11 134208042 134264567 1 1 209 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 4 0 3 93.19 99.39 0.04 0 2 NA Whitelist LUAD-US 0.62 0.01 NA NA 0.59 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 2 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 12 16157841 24444820 1 2 209 1 0 0 1 0 0.57 0 3 NA 0 NA NA NA 4 4 4 93.19 96.26 0 0 4 3 Whitelist LUAD-US 0.68 0.03 NA 0 0.64 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 13 28780200 112141515 21 32 209 5 2 8 6 11 0.31 0 31 0 0 31 6 7 34 6 8 93.19 85.52 0.02 2 4 7 Whitelist LUAD-US 0.74 0 0 0 0.59 1 Low confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA With other complex events 53 0.13 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 14 87938868 99219549 4 6 209 0 3 0 1 2 0.11 0.84 2 0 0 NA NA NA 5 5 5 93.19 84.09 0 0 5 6 Whitelist LUAD-US 0.68 0.98 0 0 0.48 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 10 0.02 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 15 92332679 92352731 1 1 209 0 0 0 1 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 93.19 84.46 0 0 5 NA Whitelist LUAD-US 0.62 0.12 NA NA 0.59 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 2 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 16 83384632 90071935 9 9 209 2 2 3 2 0 0.95 0 8 0 0 8 8 8 14 8 8 93.19 91.76 3.4 0 2 3 Whitelist LUAD-US 0.97 0.02 0 0 0.97 1 High confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA Canonical without polyploidization 18 0.04 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 17 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 18 26992235 64244136 6 10 209 2 1 2 1 4 0.88 0.01 6 0 0 6 4 6 7 4 4 93.19 95.35 0 0 5 6 Whitelist LUAD-US 13 0.96 0.06 0 0 0.91 1 Low confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA After polyploidization 16 0.04 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 19 13858390 58445196 9 16 209 2 3 2 2 7 0.95 0 22 0 0 22 4 7 37 4 8 93.19 91.77 7.62 8 3 8 Whitelist LUAD-US 13 0.95 0 0 0 0.97 1 Low confidence LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA With other complex events 25 0.06 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 20 30747141 56167138 2 2 209 0 0 1 1 0 0.57 0.81 10 0 0 10 5 8 14 5 5 93.19 90.8 1.97 0 9 6 Whitelist LUAD-US 0.68 0.95 0 0 0.64 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 21 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 22 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9b132e4f-7e35-4cc5-8711-43ad62b906d0 X 128381361 142099114 2 2 209 1 1 0 0 0 0.57 0.08 3 0 0 NA NA NA 5 5 5 93.19 100 0 0 5 4 Whitelist LUAD-US 0.68 0.23 0 0 0.64 1 No LUAD-US 9b132e4f-7e35-4cc5-8711-43ad62b906d0 LUAD 0.9 4.33 Lung-AdenoCA NA 4 0.01 frameshift_deletion,17_7579526_-_A,CN:3 3 LUAD-US DO23702 TCGA-50-6591 9b132e4f-7e35-4cc5-8711-43ad62b906d0 female deceased C34.3 63 119 NA NA Included Lung-AdenoCA LUAD US 1 3.91 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 1 36888416 115187662 6 10 84 0 2 2 2 4 0.57 0 28 0 0 28 3 5 39 5 5 26.4 46.43 50.55 0 5 1 Whitelist LUAD-US 18 0.68 0 0 0 0.64 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 16 0.1 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 2 109077076 109138074 1 1 84 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 26.4 0.03 99.88 0 1 2 Whitelist LUAD-US 0.62 0.04 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 3 5818946 138915510 1 2 84 1 1 0 0 0 0.57 0.13 2 NA 0.05 NA NA NA NA NA NA 26.4 0.41 99.56 0 2 3 Whitelist LUAD-US 0.68 0.32 NA 0.05 0.64 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 4 0.02 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 4 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 5 2066631 42135112 8 8 84 4 0 2 2 0 0.26 0 23 0 0 23 17 23 30 17 17 26.4 81.21 16.12 0 3 4 Whitelist LUAD-US 0.62 0 0 0 0.59 0 High confidence LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA After polyploidization 16 0.1 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 6 157348489 157425320 1 1 84 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA 5 3 3 26.4 0.05 99.81 0 2 3 Whitelist LUAD-US 0.62 0.73 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 7 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 8 129549599 129604960 1 1 84 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 26.4 0.04 99.96 0 2 3 Whitelist LUAD-US 0.62 0.32 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 9 20734198 37586021 1 2 84 0 0 1 1 0 0.57 0.77 4 NA 0 4 4 4 4 4 4 26.4 24.01 75.31 0 1 2 Whitelist LUAD-US 0.68 0.93 NA 0 0.64 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 4 0.02 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 10 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 11 NA NA 0 0 84 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.41 NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 12 111957704 112020857 1 1 84 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 26.4 0.05 99.87 0 1 2 Whitelist LUAD-US 0.62 0.41 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 13 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 14 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 15 70846434 71544843 1 1 84 0 1 0 0 0 0.39 0.51 3 NA 0 NA NA NA NA NA NA 26.4 0.68 98.99 0 2 3 Whitelist LUAD-US 0.62 0.75 NA 0 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 16 NA NA 0 0 84 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 17 26161987 27696690 1 1 84 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 26.4 92.41 1.89 0 1 2 Whitelist LUAD-US 0.62 0.91 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 18 31523695 73471077 3 11 84 1 3 1 1 5 0.57 0 18 0 0 18 7 18 34 7 7 26.4 19.7 75.25 2 2 3 Whitelist LUAD-US 0.74 0 0 0 0.64 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 17 0.1 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 False positive; manually removed LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 19 1174814 1227135 1 1 84 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.4 99.83 0 0 1 NA Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 20 15089103 15398171 1 1 84 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.4 0.49 98.53 0 1 2 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 21 20917672 22191827 1 1 84 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.4 77.73 0 0 0 1 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 2 0.01 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a 22 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::9f81c602-8afa-4588-b0b6-6e5a1a128d5a X NA NA 0 0 84 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.69 NA NA NA 0 No LUAD-US 9f81c602-8afa-4588-b0b6-6e5a1a128d5a LUAD 0.77 1.79 Lung-AdenoCA NA 0 0 frameshift_deletion,17_7578514_-_T,CN:1 2 LUAD-US DO23838 TCGA-05-4396 9f81c602-8afa-4588-b0b6-6e5a1a128d5a male deceased C34.3 76 303 NA NA Included Lung-AdenoCA LUAD US 1 9.97 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 1 161178683 248860526 18 31 107 2 3 7 6 13 0.29 0 21 0 0 21 10 11 28 10 11 86.34 99.84 0 0 4 10 Whitelist LUAD-US 0.93 0 0 0 0.59 1 High confidence LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA With other complex events 49 0.23 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 2 117464256 151995013 1 2 107 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA 4 3 3 86.34 97.29 0.01 0 2 4 Whitelist LUAD-US 0.54 0.04 NA 0 0.48 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 4 0.02 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 3 NA NA 0 0 107 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.03 NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 4 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 5 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 6 65037925 66557153 1 1 107 0 0 0 1 0 0.39 0.42 3 0 0 NA NA NA 6 3 3 86.34 99.86 0 0 5 7 Whitelist LUAD-US 0.62 0.67 0 0 0.59 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 2 0.01 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 7 135839976 135868064 2 2 107 0 0 1 1 0 0.57 0.39 4 0 0 4 4 4 7 5 5 86.34 99.78 0 0 5 6 Whitelist LUAD-US 0.68 0.63 0 0 0.64 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 4 0.02 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 8 46991480 57602091 6 6 107 3 3 0 0 0 0.11 0 5 0 0 5 3 4 18 4 6 86.34 79.36 20.54 0 6 4 Whitelist LUAD-US 0.54 0.01 0 0 0.48 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 12 0.06 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 9 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 10 44503376 119283767 1 4 107 2 0 0 0 2 0.11 0.03 4 0 0 4 4 4 6 6 6 86.34 85.53 14.29 3 2 4 Whitelist LUAD-US 0.54 0.12 0 0 0.48 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 6 0.03 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 11 NA NA 0 0 107 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.49 NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 12 2301233 95215416 5 10 107 1 0 2 2 5 0.53 0.02 16 0 0 16 3 7 18 3 7 86.34 95.44 4.54 8 4 6 Whitelist LUAD-US 17 0.68 0.07 0 0 0.64 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 15 0.07 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 13 87693752 87707190 1 1 107 0 0 1 0 0 0.39 0.59 1 NA 0 NA NA NA NA NA NA 86.34 0 100 0 2 NA Whitelist LUAD-US 0.62 0.81 NA 0 0.59 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 2 0.01 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 14 42739448 42950077 2 2 107 1 1 0 0 0 0.57 0.78 1 NA 0 NA NA NA NA NA NA 86.34 99.09 0 0 5 NA Whitelist LUAD-US 0.68 0.93 NA 0 0.64 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 4 0.02 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 15 NA NA 0 0 107 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.22 0 NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 16 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 17 13192865 21037606 3 3 107 0 0 1 2 0 0.3 0 8 0 0 8 4 6 14 5 7 86.34 75.91 18.75 0 2 3 Whitelist LUAD-US 0.62 0.02 0 0 0.59 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 6 0.03 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 18 NA NA 0 0 107 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.63 NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 19 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 20 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 21 34215024 34748697 2 2 107 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA 5 3 3 86.34 77.35 0 0 6 NA Whitelist LUAD-US 0.68 0.15 0 0 0.64 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 4 0.02 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 22 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 0 0 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a1e65587-24c1-4b41-92a7-4e1f15fffd78 X 7066197 14443256 4 8 107 1 1 1 1 4 1 0 10 0 0 10 4 5 26 5 9 86.34 96.31 0.23 0 2 4 Whitelist LUAD-US 0.68 0 0 0 1 1 No LUAD-US a1e65587-24c1-4b41-92a7-4e1f15fffd78 LUAD 0.32 4.75 Lung-AdenoCA NA 12 0.06 NA 7 LUAD-US DO23735 TCGA-49-4512 a1e65587-24c1-4b41-92a7-4e1f15fffd78 female deceased C34.2 69 905 NA NA Included Lung-AdenoCA LUAD US 1 29.77 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 1 27487317 246438112 2 8 94 2 1 1 0 4 0.57 0.08 22 0 0 22 4 6 23 4 6 64.71 64.67 32.36 6 4 7 Whitelist LUAD-US 0.62 0.24 0 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 12 0.06 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 2 NA NA 0 0 94 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.02 NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 3 79489858 191703138 1 3 94 1 1 0 0 1 0.57 0.42 4 0 0 4 3 4 4 3 4 64.71 37.47 62.5 1 4 2 Whitelist LUAD-US 0.62 0.67 0 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 5 0.03 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 4 92565955 127635647 7 10 94 5 1 0 1 3 0.04 0 13 0 0 13 8 8 48 11 11 64.71 66.43 33.36 9 3 2 Whitelist LUAD-US 0.62 0 0 0 0.38 1 High confidence LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA Canonical without polyploidization 17 0.09 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 5 158895411 176441714 2 3 94 1 0 0 1 1 0.57 0.39 7 0 0 7 5 7 12 7 7 64.71 30.74 66.57 4 3 2 Whitelist LUAD-US 0.87 0.64 0 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 5 0.03 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 6 42575526 88686283 1 2 94 2 0 0 0 0 0.11 1 7 0 0 7 3 7 14 4 6 64.71 77.28 22.59 0 3 5 Whitelist LUAD-US 0.54 1 0 0 0.48 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 4 0.02 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 7 70528624 86199675 2 3 94 0 1 0 1 1 0.57 0.64 4 0 0 4 3 4 11 5 5 64.71 90.12 7.33 2 5 3 Whitelist LUAD-US 0.87 0.85 0 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 5 0.03 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 8 42321462 43127157 2 2 94 0 1 0 1 0 0.57 0.01 4 0 0 4 0 3 25 6 6 64.71 77.5 19.08 0 8 7 Whitelist LUAD-US 0.68 0.04 0 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 4 0.02 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 9 111972488 120953564 1 2 94 0 2 0 0 0 0.11 0.03 3 0 0 NA NA NA 13 6 6 64.71 79.36 18.06 0 3 4 Whitelist LUAD-US 0.54 0.12 0 0 0.48 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 4 0.02 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 10 NA NA 0 0 94 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist LUAD-US NA 0.33 NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 11 41318012 43840319 6 8 94 0 0 3 3 2 0.11 0 11 0 0 11 11 11 17 13 13 64.71 57.48 38.37 0 4 3 Whitelist LUAD-US 0.62 0.01 0 0 0.48 1 High confidence LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA After polyploidization 14 0.07 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 12 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 13 NA NA 0 0 94 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.93 NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 14 97513003 97550515 1 1 94 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 64.71 96.29 0 0 4 NA Whitelist LUAD-US 0.62 0.63 NA NA 0.59 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 15 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 16 51482339 58014811 1 1 94 0 0 0 1 0 0.39 0.32 1 0.02 NA NA NA NA 4 3 3 64.71 93.78 1.69 0 3 NA Whitelist LUAD-US 0.62 0.57 0.02 NA 0.59 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 17 NA NA 0 0 94 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.76 NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 18 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 19 30559881 38807353 1 2 94 1 1 0 0 0 0.57 0.44 5 NA 0 5 3 5 8 3 5 64.71 51.63 41.09 0 4 5 Whitelist LUAD-US 0.68 0.69 NA 0 0.64 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 4 0.02 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 20 5935150 6085803 1 1 94 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 64.71 98.98 0 0 4 5 Whitelist LUAD-US 0.62 0.9 NA NA 0.59 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 22 30465243 30763647 1 1 94 0 1 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 64.71 100 0 0 3 NA Whitelist LUAD-US 0.62 0.56 NA NA 0.59 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a3de401d-91fe-49a2-bb07-81c1a06506e6 X NA NA 0 0 94 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.26 NA NA NA 1 No LUAD-US a3de401d-91fe-49a2-bb07-81c1a06506e6 LUAD 0.44 3.2 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24307 TCGA-05-4389 a3de401d-91fe-49a2-bb07-81c1a06506e6 male alive C34.1 70 NA 1369 NA Included Lung-AdenoCA LUAD US 0 45.03 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 1 20472132 114994801 8 8 21 3 0 2 3 0 0.39 0 8 0 0 8 5 5 9 5 5 26.23 14.23 85.74 23 2 1 Whitelist LUAD-US 0.62 0 0 0 0.59 0 Low confidence LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA Canonical without polyploidization 16 0.38 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 2 75575309 75587309 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.23 0.08 99.9 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 2 0.05 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 5 NA NA 0 0 21 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 29 5 10 0 0 0 0 0 0 Whitelist LUAD-US NA 0.34 NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 6 NA NA 0 0 21 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.62 NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 7 NA NA 0 0 21 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 30 7 14 0 0 0 0 0 0 Whitelist LUAD-US NA 0.56 NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 10 43611216 61652165 2 2 21 0 0 1 1 0 0.57 0.25 1 NA 0 NA NA NA NA NA NA 26.23 0 99.81 0 2 NA Whitelist LUAD-US 0.68 0.49 NA 0 0.64 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 4 0.1 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 11 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA 24 5 7 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 16 4 6 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 20 NA NA 0 0 21 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 4 7 0 0 0 0 0 0 Whitelist LUAD-US NA 0 0 NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e 22 NA NA 0 0 21 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.45 NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::a8d6694c-a213-4544-ac0b-63bce16d8f4e X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US a8d6694c-a213-4544-ac0b-63bce16d8f4e LUAD 0.62 2.3 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25887 TCGA-75-6203 a8d6694c-a213-4544-ac0b-63bce16d8f4e female alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 1 3454631 204468672 1 3 108 1 2 0 0 0 0.3 0.15 4 0 0 4 3 4 5 3 3 81.34 100 0 4 4 5 Whitelist LUAD-US 0.62 0.35 0 0 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 6 0.03 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 2 NA NA 0 0 108 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.01 NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 3 62335550 191659667 1 2 108 0 2 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 81.34 99.87 0 0 3 5 Whitelist LUAD-US 0.54 0.13 NA 0 0.48 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 4 0.02 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 4 41122983 181313245 1 3 108 0 2 0 1 0 0.3 0.33 7 0 0 7 4 4 10 4 4 81.34 72.34 25.11 1 4 6 Whitelist LUAD-US 0.62 0.58 0 0 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 6 0.03 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 5 58313228 58352159 2 2 108 0 0 1 1 0 0.57 0.16 2 0 0 NA NA NA 5 0 3 81.34 45 52.32 0 2 5 Whitelist LUAD-US 0.68 0.37 0 0 0.64 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 4 0.02 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 6 NA NA 0 0 108 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.09 NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 7 147214684 153396315 11 11 108 2 4 3 2 0 0.8 0 19 0 0 19 5 7 33 5 6 81.34 97.58 0 1 7 4 Whitelist LUAD-US 0.87 0 0 0 0.84 0 Low confidence LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA With other complex events 22 0.1 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 8 39918418 40029442 1 1 108 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 0 3 81.34 99.99 0 0 3 6 Whitelist LUAD-US 0.62 0.15 NA NA 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 9 9375911 9603559 1 1 108 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 0 4 81.34 99.57 0.27 0 3 4 Whitelist LUAD-US 0.62 0.33 NA NA 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 10 96919902 102685071 1 2 108 0 2 0 0 0 0.11 0.82 4 0 0 4 3 4 7 4 6 81.34 96.65 0 0 3 4 Whitelist LUAD-US 0.54 0.96 0 0 0.48 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 4 0.02 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 11 94056428 124689122 4 4 108 1 1 1 1 0 1 0.17 8 0 0 8 3 4 12 3 3 81.34 99.33 0.24 1 4 5 Whitelist LUAD-US 1 0.38 0 0 1 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 8 0.04 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 12 NA NA 0 0 108 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.49 NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 13 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 14 23868021 40684899 35 35 108 8 9 8 10 0 0.96 0 54 0 0 54 4 8 57 4 8 81.34 24.81 59.28 2 5 6 Whitelist LUAD-US 0.98 0 0 0 0.97 0 Low confidence LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA With other complex events 70 0.32 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 15 NA NA 0 0 108 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.63 NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 16 21262236 21296540 1 1 108 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 81.34 99.91 0 0 4 NA Whitelist LUAD-US 0.62 0.63 NA NA 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 17 27791046 70852254 3 3 108 1 0 1 1 0 0.8 0.54 9 0 0 9 4 7 10 4 7 81.34 90.7 4.84 0 2 4 Whitelist LUAD-US 0.87 0.77 0 0 0.84 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 6 0.03 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 18 3395284 3406664 1 1 108 0 1 0 0 0 0.39 1 4 NA 0 4 0 4 5 0 4 81.34 95.35 0 0 4 3 Whitelist LUAD-US 0.62 1 NA 0 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 19 3274018 52559210 1 4 108 0 3 0 1 0 0.11 0.06 5 0 0 5 3 5 5 3 5 81.34 99.56 0 0 3 4 Whitelist LUAD-US 0.54 0.19 0 0 0.48 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 8 0.04 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 20 39505921 39795858 1 3 108 1 1 1 0 0 0.8 0.3 4 0 0 4 4 4 5 5 5 81.34 98.93 0 0 3 4 Whitelist LUAD-US 0.87 0.55 0 0 0.84 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 6 0.03 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 21 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 22 39078410 39125382 1 2 108 1 1 0 0 0 0.57 0.37 1 NA 0 NA NA NA NA NA NA 81.34 100 0 0 3 NA Whitelist LUAD-US 0.68 0.62 NA 0 0.64 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 4 0.02 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::bf15f7ad-9d92-473b-91d1-f24aa373ab97 X 29569257 29939693 1 1 108 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 3 81.34 99.77 0 0 0 1 Whitelist LUAD-US 0.62 0.15 NA NA 0.59 0 No LUAD-US bf15f7ad-9d92-473b-91d1-f24aa373ab97 LUAD 0.4 3.48 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO23744 TCGA-44-2659 bf15f7ad-9d92-473b-91d1-f24aa373ab97 female alive C34.3 65 NA 529 NA Included Lung-AdenoCA LUAD US 0 17.4 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 1 47147349 120186226 4 4 136 2 0 1 1 0 0.57 0.11 6 0 0 6 3 3 16 4 6 73.08 70.92 25.84 0 5 1 Whitelist LUAD-US 0.68 0.28 0 0 0.64 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 8 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 2 187696495 190650323 2 2 136 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 11 7 7 73.08 99.84 0.04 3 3 NA Whitelist LUAD-US 0.68 1 0 0 0.64 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 3 16437152 195105470 1 6 136 0 4 0 0 2 0.01 0.31 4 0 0 4 3 4 4 3 3 73.08 85.89 13.99 8 4 2 Whitelist LUAD-US 0.25 0.56 0 0 0.16 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 10 0.04 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 4 2178913 151296713 1 9 136 1 8 0 0 0 0 1 14 0 0 14 14 14 14 14 14 73.08 99.78 0 13 3 4 Whitelist LUAD-US 0.02 1 0 0 0.02 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 18 0.07 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 5 4726015 35453352 4 5 136 1 2 0 1 1 0.57 0.02 15 0 0 15 4 7 25 4 6 73.08 56.53 43.33 0 5 6 Whitelist LUAD-US 0.93 0.08 0 0 0.64 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 9 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 6 11726247 162394717 1 10 136 0 9 1 0 0 0 0.47 10 0 0 10 8 10 11 8 8 73.08 25.69 74.07 3 2 3 Whitelist LUAD-US 0.01 0.71 0 0 0.01 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 20 0.07 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 7 104785127 105992038 2 2 136 0 2 0 0 0 0.11 0.45 3 0 0 NA NA NA 5 3 3 73.08 99.78 0 3 4 5 Whitelist LUAD-US 0.54 0.69 0 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 8 131791856 132042350 2 2 136 0 2 0 0 0 0.11 0.69 2 0 0 NA NA NA 8 4 5 73.08 81.66 14.53 1 4 5 Whitelist LUAD-US 0.54 0.89 0 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 9 16856634 134096727 1 2 136 0 2 0 0 0 0.11 0.18 1 NA 0 NA NA NA NA NA NA 73.08 99.3 0 4 4 NA Whitelist LUAD-US 0.54 0.4 NA 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 10 61278648 107891492 1 5 136 0 5 0 0 0 0 1 3 0 0 NA NA NA NA NA NA 73.08 99.82 0 0 5 4 Whitelist LUAD-US 0.1 1 0 0 0.07 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 10 0.04 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 11 33460812 108079666 1 3 136 1 2 0 0 0 0.3 0.54 4 0 0 4 4 4 5 5 5 73.08 99.57 0 0 3 4 Whitelist LUAD-US 0.62 0.77 0 0 0.59 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 6 0.02 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 12 28671882 75493121 1 2 136 0 2 0 0 0 0.11 0.1 4 NA 0 4 4 4 6 6 6 73.08 99.92 0 0 3 4 Whitelist LUAD-US 0.54 0.26 NA 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 13 64684919 81230236 4 4 136 0 0 2 2 0 0.26 0 8 0 0 8 7 8 23 12 14 73.08 77.12 22.88 2 4 3 Whitelist LUAD-US 0.62 0.02 0 0 0.59 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 8 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 14 49779683 102875908 1 4 136 0 3 1 0 0 0.11 0.62 8 0 0 8 5 8 12 5 9 73.08 96.29 0 5 3 4 Whitelist LUAD-US 0.54 0.83 0 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 8 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 15 69372792 80936563 1 3 136 0 3 0 0 0 0.03 0.79 1 0 0 NA NA NA 4 3 3 73.08 43.2 52.03 0 4 NA Whitelist LUAD-US 0.41 0.94 0 0 0.33 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 6 0.02 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 16 23449678 56987008 1 4 136 0 3 1 0 0 0.11 0.79 7 0 0 7 4 7 7 4 4 73.08 99.99 0 1 3 4 Whitelist LUAD-US 0.54 0.94 0 0 0.48 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 8 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 17 25471606 79957648 1 4 136 0 3 0 0 1 0.03 0.79 8 0 0 8 5 8 8 5 5 73.08 60.02 39.93 1 3 2 Whitelist LUAD-US 0.21 0.94 0 0 0.33 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 7 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 18 3001071 3118346 1 1 136 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 73.08 95.37 0 0 3 NA Whitelist LUAD-US 0.62 0.81 NA NA 0.59 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 19 16325693 45460473 1 1 136 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 73.08 49.27 50.55 1 2 4 Whitelist LUAD-US 0.62 0.76 NA NA 0.59 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 20 39964833 61679621 3 6 136 1 1 0 1 3 0.8 0 11 0 0 11 10 11 13 11 13 73.08 98.93 0 4 4 6 Whitelist LUAD-US 0.93 0.01 0 0 0.84 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 9 0.03 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 21 NA NA 0 0 136 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 0 0 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 22 37764302 40341357 1 1 136 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 73.08 5.02 94.98 0 2 3 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 2 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::c4d1e105-28b7-48df-abef-fbe09782fdb2 X 11601091 123201046 1 2 136 1 1 0 0 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 73.08 0 100 1 2 NA Whitelist LUAD-US 0.68 0.21 NA 0.01 0.64 0 No LUAD-US c4d1e105-28b7-48df-abef-fbe09782fdb2 LUAD 0.82 3.29 Lung-AdenoCA NA 4 0.01 NA 3 LUAD-US DO25010 TCGA-55-6972 c4d1e105-28b7-48df-abef-fbe09782fdb2 male alive C34.1 72 NA 1475 NA Included Lung-AdenoCA LUAD US 0 48.52 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 1 36075348 44923174 3 7 237 1 1 1 0 4 0.8 0.4 7 0 0 7 4 5 30 6 9 89.17 100 0 0 4 6 Whitelist LUAD-US 0.62 0.64 0 0 0.84 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 10 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 2 96640631 224440317 6 7 237 1 0 4 1 1 0.11 1 8 0 0 8 8 8 13 8 12 89.17 96.36 3.49 1 4 5 Whitelist LUAD-US 0.62 1 0 0 0.48 1 High confidence LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA After polyploidization 13 0.03 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 3 15496938 164916743 1 10 237 1 1 1 1 6 1 0.44 10 0 0 10 6 10 11 6 11 89.17 96.96 0 0 4 3 Whitelist LUAD-US 0.86 0.69 0 0 1 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 14 0.03 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 4 106286560 163284408 1 4 237 1 0 1 1 1 0.8 0.7 3 0 0 NA NA NA 12 4 5 89.17 99.9 0 1 3 4 Whitelist LUAD-US 1 0.89 0 0 0.84 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 7 0.01 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 5 37495367 38560610 2 2 237 0 0 1 1 0 0.57 0.03 1 0 0 NA NA NA 6 3 3 89.17 97.32 0 0 8 NA Whitelist LUAD-US 0.68 0.12 0 0 0.64 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 4 0.01 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 6 76858694 159094659 1 11 237 2 0 0 0 9 0.11 0.78 8 0 0 8 3 4 10 3 4 89.17 99.76 0 0 6 3 Whitelist LUAD-US 7 0.62 0.94 0 0 0.48 1 Linked to low confidence LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA With other complex events 13 0.03 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 7 83811028 152303288 14 18 237 3 2 5 4 4 0.7 0 27 0 0 27 5 15 36 7 17 89.17 97.46 0 1 7 5 Whitelist LUAD-US 0.87 0 0 0 0.78 1 Low confidence LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA With other complex events 32 0.07 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 8 31586158 57096313 3 6 237 1 0 1 1 3 0.8 0.1 13 0 0 13 3 6 16 4 6 89.17 96.47 0 0 6 5 Whitelist LUAD-US 0.62 0.27 0 0 0.84 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 9 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 9 124340662 125214172 1 1 237 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 9 3 3 89.17 96.89 0 0 3 4 Whitelist LUAD-US 0.62 0.05 NA NA 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 2 0 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 10 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 0 0 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 11 69335015 74263678 2 2 237 0 1 0 1 0 0.57 0.04 6 0 0 6 4 5 27 4 5 89.17 96.51 0 0 3 5 Whitelist LUAD-US 0.68 0.15 0 0 0.64 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 4 0.01 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 12 66204675 90869372 2 11 237 1 1 1 1 7 1 0 17 0 0 17 3 5 30 3 3 89.17 96.26 0 0 3 5 Whitelist LUAD-US 0.87 0 0 0 1 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 15 0.03 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 13 66968573 66999958 1 1 237 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 89.17 82.17 17.83 0 4 NA Whitelist LUAD-US 0.62 0.08 NA NA 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 2 0 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 14 27604019 74074089 5 6 237 1 4 0 0 1 0.04 0.01 23 0 0 23 4 4 25 4 4 89.17 99.09 0 4 4 7 Whitelist LUAD-US 0.54 0.06 0 0 0.36 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 11 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 15 77580288 95713127 1 4 237 0 1 0 0 3 0.39 0.32 7 0 0 7 4 5 15 4 5 89.17 67.7 27.36 0 5 3 Whitelist LUAD-US 0.62 0.57 0 0 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 5 0.01 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 16 NA NA 0 0 237 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.27 NA NA NA 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 0 0 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 17 3926968 47102640 1 8 237 2 0 1 0 5 0.3 0.31 7 0 0 7 3 6 9 3 6 89.17 95.54 0 1 7 5 Whitelist LUAD-US 0.62 0.56 0 0 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 11 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 18 1314039 67277280 1 4 237 2 2 0 0 0 0.26 1 4 0.1 0 4 0 3 6 3 3 89.17 99.96 0 0 4 5 Whitelist LUAD-US 0.62 1 0.1 0 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 8 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 19 28395079 36324916 10 12 237 1 1 4 4 2 0.31 0 11 0 0 11 5 6 21 5 6 89.17 92.72 0 0 6 8 Whitelist LUAD-US 0.83 0 0 0 0.59 1 Low confidence LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA With other complex events 22 0.05 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 20 17282118 61206822 1 5 237 2 0 0 0 3 0.11 0.11 8 0 0 8 3 4 10 3 4 89.17 92.91 0 0 6 4 Whitelist LUAD-US 0.62 0.28 0 0 0.48 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 7 0.01 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 21 20459559 32468862 4 4 237 1 0 1 2 0 0.57 0.01 6 0 0 6 4 4 10 4 4 89.17 77.35 0 0 6 7 Whitelist LUAD-US 0.68 0.04 0 0 0.64 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 8 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 22 41245105 41267521 1 1 237 1 0 0 0 0 0.39 0.37 1 0 NA NA NA NA 4 0 0 89.17 88.54 11.46 0 3 NA Whitelist LUAD-US 0.62 0.62 0 NA 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 2 0 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 X 61724679 64071624 2 4 237 0 0 2 2 0 0.26 0.23 1 0 0 NA NA NA 10 7 8 89.17 31.81 67.96 3 2 NA Whitelist LUAD-US 0.62 0.47 0 0 0.59 1 No LUAD-US cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 LUAD 0.5 5.16 Lung-AdenoCA NA 8 0.02 NA 80 LUAD-US DO26354 TCGA-38-4628 cc4bd56a-25c5-4c48-b583-ac3aeb778ca6 female deceased C34.1 65 1492 NA NA Included Lung-AdenoCA LUAD US 1 49.08 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 1 236005760 242822947 1 2 73 2 0 0 0 0 0.11 0.38 6 NA 0 6 6 6 10 9 9 80.03 100 0 0 5 6 Whitelist LUAD-US 0.54 0.63 NA 0 0.48 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 4 0.03 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 2 NA NA 0 0 73 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.25 NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 3 111543 188368919 1 20 73 1 2 1 2 14 0.88 0 21 0 0 21 6 15 22 6 15 80.03 96.92 0 0 3 4 Whitelist LUAD-US 0.96 0 0 0 0.91 0 Linked to low confidence LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA With other complex events 26 0.18 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 4 151840068 152048142 1 1 73 0 1 0 0 0 0.39 0.82 1 0 NA NA NA NA 4 3 3 80.03 30.47 69.51 0 2 NA Whitelist LUAD-US 0.62 0.96 0 NA 0.59 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 5 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 6 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 7 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 8 898539 112976203 14 28 73 6 1 5 2 14 0.18 0 49 0 0 49 4 8 53 4 10 80.03 91.4 5.17 2 3 4 Whitelist LUAD-US 3 0.62 0 0 0 0.59 0 Low confidence LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA With other complex events 42 0.29 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 9 130742524 130851062 1 1 73 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 3 3 80.03 96.92 0 0 3 6 Whitelist LUAD-US 0.62 0.62 NA NA 0.59 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 2 0.01 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 10 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 11 559917 48111447 1 12 73 2 0 0 0 10 0.11 0 7 0 0 7 4 7 7 4 4 80.03 88.66 10.92 0 3 2 Whitelist LUAD-US 19 0.68 0 0 0 0.48 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 14 0.1 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 12 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 13 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 14 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 15 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 16 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 17 NA NA 0 0 73 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.9 NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 18 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 19 31726154 49127105 1 11 73 0 1 1 0 9 0.57 0 5 0 0 5 5 5 8 5 5 80.03 70.77 21.95 0 3 2 Whitelist LUAD-US 0.98 0 0 0 0.64 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 13 0.09 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 20 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 21 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 22 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::cd0dc947-b708-464e-beb7-954c9d4583e7 X NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US cd0dc947-b708-464e-beb7-954c9d4583e7 LUAD 0.36 3.47 Lung-AdenoCA NA 0 0 NA 4 LUAD-US DO24467 TCGA-73-4659 cd0dc947-b708-464e-beb7-954c9d4583e7 male deceased C34.1 66 711 NA NA Included Lung-AdenoCA LUAD US 1 23.39 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 1 20794763 24743410 2 2 98 1 0 1 0 0 0.57 0.71 3 0 0 NA NA NA 8 3 4 71.1 100 0 0 3 4 Whitelist LUAD-US 0.68 0.9 0 0 0.64 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 2 NA NA 0 0 98 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 25 5 7 0 0 0 0 0 0 Whitelist LUAD-US NA 0.07 NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 3 89808789 89983461 1 2 98 0 1 0 0 1 0.39 0.69 2 0 0 NA NA NA 13 7 11 71.1 56.27 40.67 0 2 4 Whitelist LUAD-US 0.54 0.89 0 0 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 4 87712304 88097396 1 1 98 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 20 5 7 71.1 75.69 21.86 0 3 5 Whitelist LUAD-US 0.62 0.2 NA NA 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 5 1371638 62121680 26 29 98 9 5 6 6 3 0.71 0 34 0 0 34 3 6 47 5 6 71.1 75.07 22.26 0 7 3 Whitelist LUAD-US 0.8 0 0 0 0.79 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 55 0.28 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 6 NA NA 0 0 98 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 23 7 7 0 0 0 0 0 0 Whitelist LUAD-US NA 0.12 NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 7 10745342 108454083 1 4 98 0 1 1 0 2 0.57 0.82 9 0 0 9 3 5 14 5 5 71.1 97.45 0 0 3 1 Whitelist LUAD-US 0.68 0.96 0.01 0 0.64 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 8 42275217 52341189 2 2 98 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 16 5 5 71.1 96.58 0 7 5 6 Whitelist LUAD-US 0.68 0.01 0 0 0.64 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 9 8752290 9371003 1 1 98 1 0 0 0 0 0.39 0.19 3 NA NA NA NA NA 13 7 10 71.1 99.33 0 0 1 0 Whitelist LUAD-US 0.62 0.41 NA NA 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 10 14537368 14760109 1 1 98 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 8 4 6 71.1 77.62 22.31 0 3 4 Whitelist LUAD-US 0.62 0.33 NA NA 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 11 4920713 20379348 2 6 98 0 1 1 0 4 0.57 0 13 0 0 13 3 6 29 4 6 71.1 95.95 0.56 2 3 6 Whitelist LUAD-US 0.62 0 0 0 0.64 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 12 129384418 132514746 3 6 98 1 0 1 1 3 0.8 0.01 6 0 0 6 3 4 18 4 8 71.1 89.43 6.66 0 4 2 Whitelist LUAD-US 0.93 0.03 0 0 0.84 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 9 0.05 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 13 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 6 6 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 14 NA NA 0 0 98 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.78 NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 16 47238901 78943621 2 6 98 1 0 1 0 4 0.57 0 5 0 0 5 5 5 10 8 9 71.1 95.56 0 0 3 1 Whitelist LUAD-US 0.93 0.01 0 0 0.64 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 17 62698922 62720183 1 1 98 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 71.1 68.22 27.33 0 3 NA Whitelist LUAD-US 0.62 0.76 NA NA 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 18 47091511 47377244 1 1 98 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA 6 4 4 71.1 84.19 11.17 0 1 2 Whitelist LUAD-US 0.62 0.92 NA NA 0.59 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 19 NA NA 0 0 98 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.9 NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 20 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 21 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da 22 NA NA 0 0 98 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d2824e6d-3784-45c2-9b0f-52b17356b5da X NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US d2824e6d-3784-45c2-9b0f-52b17356b5da LUAD 0.38 3.03 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 3 LUAD-US DO24497 TCGA-75-5147 d2824e6d-3784-45c2-9b0f-52b17356b5da female alive C34.1 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 1 245837401 246125253 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 55.43 99.88 0.12 2 2 3 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 2 225504188 228165104 2 4 209 0 0 2 2 0 0.26 0.32 4 0 0 4 3 4 16 9 9 55.43 74.04 25.86 0 3 2 Whitelist LUAD-US 0.62 0.57 0 0 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 3 63606426 113543650 2 10 209 1 1 1 1 6 1 0.17 16 0 0 16 4 5 31 5 6 55.43 61.35 35.51 1 4 2 Whitelist LUAD-US 4 0.68 0.39 0 0 1 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 4 15739011 136858803 1 8 209 3 0 1 0 4 0.11 0.49 8 0 0 8 5 6 11 5 6 55.43 2.76 94.76 9 2 4 Whitelist LUAD-US 0.54 0.73 0 0 0.48 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 5 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 6 39244076 50016258 10 11 209 2 2 3 3 1 0.94 0 14 0 0 14 5 5 22 6 6 55.43 80.57 19.28 0 11 7 Whitelist LUAD-US 0.87 0 0 0 0.96 1 Low confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 21 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 7 7620737 8082773 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 55.43 0.67 99.1 0 1 2 Whitelist LUAD-US 0.62 0 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 8 1104196 79784584 29 30 209 5 7 7 10 1 0.62 0 45 0 0 45 7 10 49 7 12 55.43 96.54 0.04 2 4 3 Whitelist LUAD-US 0.74 0 0 0 0.7 1 High confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 59 0.14 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 9 115017031 131409252 5 17 209 1 2 1 1 12 0.9 0 15 0 0 15 5 11 25 5 11 55.43 49.5 49.8 0 3 4 Whitelist LUAD-US 12_6_8 0.99 0 0 0 0.92 1 Linked to high confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 22 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 10 306374 78080256 1 6 209 2 0 0 0 4 0.11 0.74 12 0 0 12 3 7 14 3 8 55.43 45.29 51.23 0 2 3 Whitelist LUAD-US 0.62 0.91 0 0 0.48 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 11 5391051 66800121 1 6 209 2 0 1 0 3 0.3 0.74 12 0 0 12 3 5 17 3 5 55.43 99.57 0 1 3 4 Whitelist LUAD-US 12 0.68 0.91 0 0 0.59 1 Linked to low confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 12 49376535 90124478 7 26 209 3 3 1 0 19 0.28 0 41 0 0 41 5 20 50 5 7 55.43 71.48 24.77 15 5 3 Whitelist LUAD-US 0.75 0 0 0 0.59 1 Low confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 33 0.08 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 13 33846175 41641608 6 6 209 1 2 1 2 0 0.88 0 13 0 0 13 4 5 42 7 11 55.43 76.99 23.01 0 3 5 Whitelist LUAD-US 0.93 0 0 0 0.91 1 Low confidence LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA With other complex events 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 14 43177118 43310605 1 1 209 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 6 3 4 55.43 84.09 0 0 5 9 Whitelist LUAD-US 0.62 0.21 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 15 NA NA 0 0 209 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.12 NA NA NA 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 16 79826239 80280530 1 1 209 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 55.43 99.4 0.5 0 2 3 Whitelist LUAD-US 0.62 0.16 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 17 28831992 28858346 1 1 209 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 6 3 3 55.43 36.42 59.13 0 4 5 Whitelist LUAD-US 0.62 0.16 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 18 29258194 44388561 1 3 209 2 0 1 0 0 0.3 0.67 6 0 0 6 3 4 7 3 3 55.43 99.99 0 0 1 0 Whitelist LUAD-US 0.62 0.87 0 0 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 19 58952261 59036786 1 1 209 0 1 0 0 0 0.39 0.14 1 0 NA NA NA NA 11 6 6 55.43 67.86 24.71 1 5 NA Whitelist LUAD-US 0.62 0.33 0 NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 20 26273259 59019567 3 3 209 0 0 2 1 0 0.3 1 6 0 0 6 4 6 6 4 4 55.43 83.93 15.07 5 5 2 Whitelist LUAD-US 0.62 1 0 0 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 21 29830114 40392719 1 4 209 1 0 1 1 1 0.8 0.33 8 0 0 8 7 8 10 7 7 55.43 13.4 57.36 0 2 3 Whitelist LUAD-US 0.68 0.58 0 0 0.84 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 22 18278868 42627743 1 3 209 2 0 0 0 1 0.11 0.74 5 NA 0 5 3 5 6 4 4 55.43 36.46 63.54 0 2 1 Whitelist LUAD-US 0.62 0.91 NA 0 0.48 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::d5326429-9805-47f9-97b0-fbda658e3f01 X 28751344 28951238 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 55.43 0.13 99.64 0 1 2 Whitelist LUAD-US 0.62 0.01 NA NA 0.59 1 No LUAD-US d5326429-9805-47f9-97b0-fbda658e3f01 LUAD 0.63 2.78 Lung-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 5 LUAD-US DO23608 TCGA-91-6840 d5326429-9805-47f9-97b0-fbda658e3f01 female alive C34.1 59 NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 1 174278364 174321855 1 1 40 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 4 20.62 41.9 58.1 0 3 4 Whitelist LUAD-US 0.62 0.62 NA NA 0.59 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 2 29265065 42491945 2 2 40 0 0 1 1 0 0.57 0.58 1 0 0 NA NA NA NA NA NA 20.62 0 99.9 0 2 NA Whitelist LUAD-US 0.68 0.8 0 0 0.64 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 4 0.05 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 3 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 4 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 5 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 6 3073059 49773930 13 18 40 6 3 2 2 5 0.35 0 18 0 0 18 12 18 23 15 21 20.62 18.27 78.89 6 2 3 Whitelist LUAD-US 17 0.68 0 0 0 0.59 1 High confidence LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA Canonical without polyploidization 31 0.39 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 7 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 8 111499518 111551719 1 1 40 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 20.62 0 99.99 0 2 NA Whitelist LUAD-US 0.62 0.9 NA NA 0.59 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 9 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 10 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 11 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 12 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 13 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 14 44490624 44583991 1 1 40 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 20.62 1.27 95.02 0 1 2 Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 2 0.02 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 16 NA NA 0 0 40 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.09 NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 17 9065515 76403933 6 10 40 3 0 2 1 4 0.34 0 6 0 0 6 6 6 6 6 6 20.62 94.56 0 0 1 3 Whitelist LUAD-US 6 0.86 0 0 0 0.59 1 Low confidence LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA Canonical without polyploidization 16 0.2 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 18 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 19 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 20 33602674 62841565 1 6 40 0 0 2 1 3 0.3 0 9 0 0 9 9 9 10 9 10 20.62 46.43 53.22 0 3 1 Whitelist LUAD-US 0.93 0 0 0 0.59 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 9 0.11 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 22 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 X NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 LUAD 0.72 2.22 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO25068 TCGA-67-6215 dbd5b0de-94c9-45dd-afb3-6820a7ecaca2 female alive C34.3 52 NA 162 NA Included Lung-AdenoCA LUAD US 0 5.33 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 9 NA NA 0 0 2 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.22 NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 12 25539290 29201471 1 1 2 0 0 1 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 5.04 0 99.92 0 2 NA Whitelist LUAD-US 0.62 0.25 NA NA 0.59 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 2 0.5 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::df576520-a6b6-4c9b-8d06-3f59cc5342fd X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US df576520-a6b6-4c9b-8d06-3f59cc5342fd LUAD 0.26 1.95 Lung-AdenoCA NA 0 0 NA 2 LUAD-US DO23648 TCGA-75-7030 df576520-a6b6-4c9b-8d06-3f59cc5342fd male alive C34.3 NA NA 0 NA Included Lung-AdenoCA LUAD US 0 0 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 1 145625856 163083972 10 10 52 3 2 4 1 0 0.57 0 12 0 0 12 7 12 44 9 9 37.82 72.1 27.88 1 2 3 Whitelist LUAD-US 0.68 0 0 0 0.64 1 High confidence LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA With other complex events 20 0.19 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 2 232496268 232571630 1 1 52 0 1 0 0 0 0.39 0.62 2 0 NA NA NA NA 5 3 3 37.82 4.73 95.17 0 2 3 Whitelist LUAD-US 0.62 0.84 0 NA 0.59 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 2 0.02 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 3 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 4 NA NA 0 0 52 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.5 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 5 NA NA 0 0 52 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.5 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 6 50959610 159655850 1 2 52 1 0 1 0 0 0.57 1 5 NA 0 5 3 5 6 3 6 37.82 98.9 0.95 1 1 2 Whitelist LUAD-US 0.68 1 NA 0 0.64 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 4 0.04 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 7 NA NA 0 0 52 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUAD-US NA 0.92 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 8 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.76 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 9 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 10 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 11 128026383 132150456 1 1 52 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 3 37.82 21.99 77.58 0 1 2 Whitelist LUAD-US 0.62 0.91 NA NA 0.59 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 2 0.02 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 12 26133248 56664112 2 2 52 1 0 0 1 0 0.57 0 2 0 0 NA NA NA 14 9 9 37.82 51.03 48.89 0 1 2 Whitelist LUAD-US 0.68 0 0 0 0.64 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 4 0.04 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 13 61278305 62316827 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.82 0.9 99.1 0 1 2 Whitelist LUAD-US 0.62 1 NA NA 0.59 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 2 0.02 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 14 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 17 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 18 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 19 NA NA 0 0 52 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.52 NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 0 0 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 X 34058073 34117786 1 1 52 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 37.82 99.96 0.04 0 1 2 Whitelist LUAD-US 0.62 0.76 NA NA 0.59 1 No LUAD-US ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 LUAD 0.85 1.76 Lung-AdenoCA NA 2 0.02 NA 1 LUAD-US DO23610 TCGA-50-5932 ebcba7f2-ce13-4bae-97cd-91a6b1dcd465 male deceased C34.1 75 1235 NA NA Included Lung-AdenoCA LUAD US 1 40.62 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 2 77030025 77055172 1 1 20 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.93 0.01 99.89 0 1 2 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 2 0.05 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 6 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 7 151648477 154922228 1 1 20 0 1 0 0 0 0.39 1 3 NA NA NA NA NA NA NA NA 13.93 0.03 99.74 0 2 4 Whitelist LUAD-US 0.62 1 NA NA 0.59 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 2 0.05 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 12 60485092 69941157 10 10 20 3 5 0 2 0 0.16 0 20 0 0 20 4 14 36 4 4 13.93 92.77 3.34 0 6 5 Whitelist LUAD-US 0.62 0 0 0 0.59 0 Low confidence LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA With other complex events 20 0.5 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 17 NA NA 0 0 20 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.67 NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f063ddbb-1668-40df-9ec2-b0a23ca2c389 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f063ddbb-1668-40df-9ec2-b0a23ca2c389 LUAD 0.42 2.05 Lung-AdenoCA NA 0 0 NA 12 LUAD-US DO23687 TCGA-55-6984 f063ddbb-1668-40df-9ec2-b0a23ca2c389 female deceased C34.3 71 760 NA NA Included Lung-AdenoCA LUAD US 1 25 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 1 51187036 241662720 1 5 155 2 2 0 0 1 0.26 0.14 6 0 0 6 4 6 8 5 5 65.51 73.83 26.17 0 3 2 Whitelist LUAD-US 0.68 0.33 0 0 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 2 130393409 130403516 1 1 155 0 0 0 1 0 0.39 0.04 2 0 0 NA NA NA 5 3 3 65.51 99.9 0 2 2 4 Whitelist LUAD-US 0.62 0.14 0 0 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 3 NA NA 0 0 155 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist LUAD-US NA 0.23 0 NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 4 NA NA 0 0 155 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 0.02 NA NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 5 53243299 53833349 1 1 155 0 0 0 1 0 0.39 0.05 4 0 0 4 0 3 24 7 12 65.51 75.09 22.24 1 7 3 Whitelist LUAD-US 0.62 0.15 0 0 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 6 3096011 103622784 1 3 155 0 2 0 0 1 0.11 0.18 3 0 0.01 NA NA NA 4 3 3 65.51 38.8 61.07 1 2 3 Whitelist LUAD-US 0.62 0.39 0 0.01 0.48 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 7 28620077 157552473 1 4 155 1 0 1 0 2 0.57 0.86 10 0 0 10 7 10 12 7 7 65.51 87.45 10 0 3 2 Whitelist LUAD-US 1 0.99 0 0 0.64 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 8 61502055 64049453 2 2 155 0 0 1 1 0 0.57 0.71 2 0 0 NA NA NA 4 3 4 65.51 57.97 41.92 0 2 3 Whitelist LUAD-US 0.68 0.9 0 0 0.64 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 9 81305572 104790699 1 1 155 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 65.51 42.37 55.06 0 3 NA Whitelist LUAD-US 0.62 0.54 NA NA 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 10 2801802 113402436 1 2 155 2 0 0 0 0 0.11 0.05 3 NA 0.04 NA NA NA 4 3 4 65.51 96.44 0 1 3 4 Whitelist LUAD-US 0.54 0.17 NA 0.04 0.48 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 11 64033849 75082692 6 14 155 3 1 1 1 8 0.57 0 18 0 0 18 3 4 26 3 3 65.51 60.89 38.69 5 5 21 Whitelist LUAD-US 0.62 0 0 0 0.64 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 20 0.06 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 12 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA NA NA NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 13 26971337 32503365 1 1 155 0 0 1 0 0 0.39 0.38 5 0 0 5 3 4 11 3 4 65.51 29.43 70.57 0 7 5 Whitelist LUAD-US 0.62 0.63 0 0 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 14 NA NA 0 0 155 0 0 0 0 0 NA 1 NA NA NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 15 49398113 65221408 7 8 155 3 0 2 2 1 0.44 0 10 0 0 10 3 5 21 3 5 65.51 44.26 55.64 2 4 2 Whitelist LUAD-US 0.87 0 0 0 0.64 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 16 NA NA 0 0 155 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUAD-US NA 1 NA NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 17 48745185 59653681 1 4 155 1 0 1 1 1 0.8 0.62 7 0 0 7 7 7 8 8 8 65.51 65.44 34.55 0 2 3 Whitelist LUAD-US 0.68 0.83 0 0 0.84 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 18 3438465 21265153 1 6 155 2 2 0 0 2 0.26 0.01 6 0 0 6 3 4 7 3 4 65.51 95.04 0 0 5 6 Whitelist LUAD-US 0.62 0.04 0 0 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 19 NA NA 0 0 155 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LUAD-US NA 0.05 0 NA NA 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 20 42102234 61201973 1 2 155 0 1 0 1 0 0.57 0.15 3 0 0 NA NA NA 6 4 4 65.51 62.18 36.84 0 4 5 Whitelist LUAD-US 0.68 0.36 0 0 0.64 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 21 20869536 29315469 4 4 155 0 0 3 1 0 0.11 0 9 0 0 9 3 4 11 4 4 65.51 77.64 0 0 4 5 Whitelist LUAD-US 0.54 0 0 0 0.48 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 22 38130160 38242293 1 2 155 1 0 0 0 1 0.39 0 3 0 NA NA NA NA 14 0 0 65.51 75.37 24.63 0 14 16 Whitelist LUAD-US 0.68 0 0 NA 0.59 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUAD-US::f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 X 147715186 154903339 6 7 155 4 0 2 0 1 0.06 0 17 0 0 17 5 5 23 5 6 65.51 16.48 83.29 1 4 0 Whitelist LUAD-US 0.62 0 0 0 0.48 0 No LUAD-US f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 LUAD 0.52 3.07 Lung-AdenoCA NA 13 0.04 nonsynonymous_SNV,17_7578177_A_C,CN:3 4 LUAD-US DO25104 TCGA-64-1678 f77cf4d3-9829-4fd3-95a1-b29aed9e94b8 female alive C34.1 70 NA 1189 NA Included Lung-AdenoCA LUAD US 0 39.11 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 1 51845048 55431534 11 14 307 4 1 4 2 3 0.48 0 9 0 0 9 4 5 36 4 7 55.6 99.03 0.97 14 2 4 Whitelist LUSC-US 8 0.68 0 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 25 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 2 32968870 222526259 1 29 307 15 3 0 1 10 0 0.06 36 0 0 36 7 9 39 7 7 55.6 63.32 33.95 3 3 2 Whitelist LUSC-US 16 0 0.19 0 0 0 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 48 0.08 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 3 4609403 185500335 1 9 307 6 1 0 0 2 0 0.02 12 0 0 12 4 7 12 4 4 55.6 51.69 44.67 1 4 2 Whitelist LUSC-US 0.02 0.07 0 0 0.09 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 16 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 4 26778651 103658106 1 5 307 2 2 0 0 1 0.26 0.09 9 0 0 9 3 6 12 3 5 55.6 41.87 57.95 0 2 3 Whitelist LUSC-US 0.62 0.24 0 0 0.59 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 9 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 5 1852334 41793671 6 11 307 0 4 1 1 5 0.11 0.01 22 0 0 22 6 10 42 6 9 55.6 49.02 47.82 4 4 3 Whitelist LUSC-US 2 0.68 0.04 0 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 17 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 6 71537362 89946643 3 8 307 0 0 1 2 5 0.3 0.12 4 0 0 4 4 4 23 4 10 55.6 96.65 0.51 0 3 4 Whitelist LUSC-US 15_8 1 0.3 0 0 0.59 0 Linked to low confidence LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC After polyploidization 11 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 7 111393547 111600125 2 2 307 0 0 1 1 0 0.57 0.61 2 0 0 NA NA NA 17 3 5 55.6 0.63 99.14 0 1 2 Whitelist LUSC-US 0.68 0.83 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 8 24237409 142905707 2 14 307 0 2 1 1 10 0.57 0.01 29 0 0 29 5 6 30 5 7 55.6 95.14 1.44 0 3 4 Whitelist LUSC-US 0.81 0.03 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 18 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 9 33317779 33887788 2 2 307 0 0 1 1 0 0.57 0.18 2 0 0 NA NA NA 8 6 6 55.6 27.36 71.93 0 1 2 Whitelist LUSC-US 0.68 0.4 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 10 60698028 62061612 2 2 307 0 1 0 1 0 0.57 0.78 4 0 0 4 0 3 21 7 8 55.6 67.62 28.64 0 2 4 Whitelist LUSC-US 0.68 0.94 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 11 101611267 103119153 13 14 307 3 3 4 3 1 0.97 0 10 0 0 10 3 3 24 5 5 55.6 26.87 69.61 0 49 23 Whitelist LUSC-US 0.9 0 0 0 0.98 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 27 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 12 854872 104690566 1 16 307 6 1 2 2 5 0.15 0.22 26 0 0 26 5 9 28 5 9 55.6 96.12 0.14 3 3 4 Whitelist LUSC-US 16 0.54 0.45 0 0 0.59 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 27 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 13 NA NA 0 0 307 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.02 NA NA NA 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 14 37251783 100719268 1 4 307 3 0 0 0 1 0.03 0.32 4 0 0 4 0 4 8 4 4 55.6 36.14 47.95 0 1 2 Whitelist LUSC-US 0.54 0.57 0 0 0.33 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 15 74425114 99150104 6 8 307 2 0 2 2 2 0.57 0.02 9 0 0 9 5 5 18 6 6 55.6 32.91 62.18 0 3 2 Whitelist LUSC-US 0.87 0.08 0 0 0.64 0 Low confidence LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC With other complex events 14 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 16 3859370 85310134 1 16 307 7 1 1 0 7 0 0.01 12 0 0 12 6 7 13 6 8 55.6 48.17 47.3 1 2 3 Whitelist LUSC-US 12_2 0.46 0.03 0 0 0.11 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 25 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 17 55286239 79290912 1 4 307 3 1 0 0 0 0.11 0.16 5 0 0 5 3 5 5 3 5 55.6 0.19 99.81 0 2 0 Whitelist LUSC-US 0.54 0.36 0 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 18 18810810 48377224 1 2 307 2 0 0 0 0 0.11 0.07 3 NA 0 NA NA NA 4 4 4 55.6 38.3 61.67 0 2 1 Whitelist LUSC-US 0.54 0.22 NA 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 19 46507577 47410632 1 2 307 2 0 0 0 0 0.11 0.84 4 0 0 4 3 4 11 3 8 55.6 50.57 49.26 0 4 2 Whitelist LUSC-US 0.54 0.98 0 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 20 6648689 8969894 1 2 307 2 0 0 0 0 0.11 0.23 4 NA 0 4 3 4 7 3 5 55.6 77.11 15.75 0 3 1 Whitelist LUSC-US 0.54 0.47 NA 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 21 29127803 43339713 1 2 307 1 1 0 0 0 0.57 0.79 3 0 0 NA NA NA 6 5 5 55.6 4.09 73.1 0 2 1 Whitelist LUSC-US 0.68 0.94 0 0 0.64 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b 22 46141489 46648672 2 2 307 2 0 0 0 0 0.11 0.79 4 0 0 4 3 4 6 3 3 55.6 24.77 63 0 1 0 Whitelist LUSC-US 0.54 0.94 0 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::037c57d1-b4a5-45dc-bda4-0550461d321b X 22004663 142015097 1 2 307 2 0 0 0 0 0.11 0.03 3 0 0 NA NA NA 4 3 3 55.6 100 0 0 1 0 Whitelist LUSC-US 0.54 0.1 0 0 0.48 0 No LUSC-US 037c57d1-b4a5-45dc-bda4-0550461d321b LUSC 0.35 2.51 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 LUSC-US DO26971 TCGA-22-1016 037c57d1-b4a5-45dc-bda4-0550461d321b male deceased C34.9 65 822 NA NA Included Lung-SCC LUSC US 1 27.04 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 1 59980537 60091660 2 3 209 2 0 0 0 1 0.11 0.04 1 0 0 NA NA NA 24 10 17 66 85.93 14.07 0 3 NA Whitelist LUSC-US 0.62 0.13 0 0 0.48 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 2 141752787 142034238 4 4 209 4 0 0 0 0 0.01 0 4 0 0 4 3 4 45 6 11 66 97.15 0.07 9 4 1 Whitelist LUSC-US 0.21 0 0 0 0.16 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 3 76941204 174332314 1 5 209 3 0 0 0 2 0.03 0.01 5 0 0 5 0 3 6 0 3 66 62.36 34.56 19 5 1 Whitelist LUSC-US 0.62 0.06 0 0 0.33 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 4 74131882 91273360 1 2 209 1 1 0 0 0 0.57 0.03 2 0 0 NA NA NA 8 5 5 66 0.54 99.36 0 2 3 Whitelist LUSC-US 0.68 0.1 0 0 0.64 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 5 7830470 88829799 28 28 209 7 10 5 6 0 0.57 0 45 0 0 45 9 10 51 9 10 66 70.63 29.24 12 5 7 Whitelist LUSC-US 0.68 0 0 0 0.64 1 High confidence LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC With other complex events 56 0.13 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 6 12668808 117292661 1 5 209 1 1 0 1 2 0.8 0.14 10 0 0 10 3 5 11 3 4 66 83.47 16.38 7 3 4 Whitelist LUSC-US 0.62 0.34 0 0 0.84 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 7 3762306 158116832 1 8 209 2 1 0 0 5 0.3 0.64 11 0 0 11 5 6 11 5 6 66 60.95 36.5 20 2 4 Whitelist LUSC-US 5 0.68 0.85 0 0 0.59 1 Linked to high confidence LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC With other complex events 11 0.03 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 8 76916816 76944408 1 1 209 1 0 0 0 0 0.39 0.08 2 0 NA NA NA NA 8 4 4 66 96.47 0 0 4 5 Whitelist LUSC-US 0.62 0.23 0 NA 0.59 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 9 15996503 22530833 9 9 209 2 3 2 2 0 0.95 0.72 10 0 0 10 5 10 13 5 5 66 2.06 97.8 14 2 0 Whitelist LUSC-US 0.97 0.9 0 0 0.97 1 Low confidence LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC With other complex events 18 0.04 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 10 93728706 134286386 1 1 209 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA NA NA NA 66 69.9 29.92 10 2 4 Whitelist LUSC-US 0.62 0.11 0 NA 0.59 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 11 111480603 122064285 1 2 209 1 1 0 0 0 0.57 0.07 2 0 0 NA NA NA 7 3 3 66 56.13 43.31 1 2 4 Whitelist LUSC-US 0.68 0.2 0 0 0.64 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 12 49050881 50275526 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 66 99 0.92 6 2 4 Whitelist LUSC-US 0.62 0.03 NA NA 0.59 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 13 19819892 25092900 2 2 209 1 0 0 1 0 0.57 0.57 3 0 0 NA NA NA 6 4 4 66 97.63 2.37 0 4 3 Whitelist LUSC-US 0.68 0.79 0 0 0.64 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 14 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 15 35772170 45576257 2 3 209 0 2 0 0 1 0.11 0.53 5 0 0 5 3 3 9 4 4 66 56.83 43.04 0 2 4 Whitelist LUSC-US 0.62 0.76 0 0 0.48 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 16 7274942 31282007 1 2 209 1 1 0 0 0 0.57 0.67 4 0 0 4 3 4 8 3 3 66 46.4 47.65 13 4 3 Whitelist LUSC-US 0.68 0.87 0 0 0.64 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 17 NA NA 0 0 209 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.16 NA NA NA 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 18 1190790 67995083 25 41 209 8 8 3 6 16 0.44 0 46 0 0 46 6 7 47 6 7 66 94.17 1.03 6 4 3 Whitelist LUSC-US 0.81 0 0 0 0.64 1 Low confidence LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC With other complex events 66 0.16 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 19 36398250 45079355 1 2 209 1 1 0 0 0 0.57 0.8 4 NA 0 4 3 4 6 3 3 66 89.14 3.32 0 4 3 Whitelist LUSC-US 0.68 0.95 NA 0 0.64 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 20 NA NA 0 0 209 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.34 NA NA NA 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 21 14366223 44334417 7 18 209 2 2 2 1 11 0.93 0 20 0 0 20 6 10 20 6 10 66 37.3 40.1 4 1 2 Whitelist LUSC-US 0.64 0 0 0 0.95 1 Low confidence LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC With other complex events 25 0.06 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 22 NA NA 0 0 209 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.91 NA NA NA 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0398eae1-7216-4595-80a5-6b117d96e070 X NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 0398eae1-7216-4595-80a5-6b117d96e070 LUSC 0.57 3.08 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 4 LUSC-US DO26769 TCGA-21-1083 0398eae1-7216-4595-80a5-6b117d96e070 male deceased C34.1 75 1315 NA NA Included Lung-SCC LUSC US 1 43.26 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 2 164463144 214225373 1 2 2 1 1 0 0 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 6.85 0 99.9 7 2 NA Whitelist LUSC-US 0.68 0.03 NA 0 0.64 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 4 1 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0ab8d063-62b4-4d47-82aa-e3351a60029d X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 0ab8d063-62b4-4d47-82aa-e3351a60029d LUSC 0.92 1.93 Lung-SCC NA 0 0 NA 2 LUSC-US DO26653 TCGA-21-1078 0ab8d063-62b4-4d47-82aa-e3351a60029d male deceased C34.3 77 474 NA NA Included Lung-SCC LUSC US 1 15.59 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 1 26664288 246385309 1 6 124 3 0 1 1 1 0.28 0.87 5 0 0 5 5 5 6 6 6 47.09 16.59 83.41 3 1 2 Whitelist LUSC-US 0.62 1 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 11 0.04 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 2 127548592 232314116 4 4 124 3 1 0 0 0 0.11 0.14 2 0 0 NA NA NA 14 9 9 47.09 60.85 39.03 1 1 2 Whitelist LUSC-US 0.54 0.34 0 0 0.48 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 8 0.03 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 3 3241635 56533765 2 3 124 0 0 1 1 1 0.57 0.38 3 0 0 NA NA NA 11 4 4 47.09 76.99 22.87 2 1 2 Whitelist LUSC-US 0.62 0.63 0 0 0.64 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 5 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 4 2715401 174947490 1 10 124 2 1 1 1 5 0.9 0.1 6 0 0 6 3 6 7 3 3 47.09 88.39 11.6 9 1 2 Whitelist LUSC-US 0.68 0.27 0 0 0.92 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 15 0.06 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 5 7627962 173266808 1 3 124 2 0 0 0 1 0.11 0.45 5 0.06 0.55 5 3 5 6 4 4 47.09 86.88 13 3 2 1 Whitelist LUSC-US 0.62 0.7 0.06 0.55 0.48 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 5 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 6 30969730 123544859 1 4 124 2 1 0 0 1 0.3 0.25 4 0 0 4 3 4 5 3 3 47.09 1.64 98.18 5 2 1 Whitelist LUSC-US 0.62 0.5 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 7 0.03 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 7 23703018 33424156 1 3 124 2 1 0 0 0 0.3 0.84 2 0 0 NA NA NA 6 6 6 47.09 57.24 42.54 0 1 2 Whitelist LUSC-US 0.62 0.98 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 6 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 8 540513 120759964 1 2 124 0 0 0 1 1 0.39 0.1 2 NA NA NA NA NA NA NA NA 47.09 1.69 98.31 4 1 2 Whitelist LUSC-US 0.54 0.26 NA NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 3 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 9 18875835 18970039 1 1 124 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 47.09 99.29 0 0 0 1 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 10 22621596 77370928 1 4 124 2 0 0 1 1 0.3 0.19 6 0 0 6 0 4 9 4 5 47.09 85.46 11.2 0 2 3 Whitelist LUSC-US 0.68 0.41 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 7 0.03 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 11 117682295 118340733 1 1 124 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 7 5 5 47.09 43.12 56.32 0 2 3 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 12 68144320 120411504 2 7 124 1 1 1 1 3 1 0.39 3 0 0 NA NA NA 4 3 3 47.09 16.26 83.66 6 1 2 Whitelist LUSC-US 0.96 0.64 0 0 1 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 11 0.04 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 13 48721767 103697126 1 6 124 2 1 0 0 3 0.3 0.04 5 0 0 5 4 5 6 4 4 47.09 43.86 56.14 0 1 2 Whitelist LUSC-US 0.68 0.14 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 9 0.04 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 14 61072827 65579650 1 2 124 1 0 0 1 0 0.57 0.8 2 0 0 NA NA NA NA NA NA 47.09 1.02 98.06 0 1 2 Whitelist LUSC-US 0.68 0.95 0 0 0.64 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 4 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 15 58724678 77158255 1 3 124 1 1 0 0 1 0.57 1 4 NA 0 4 4 4 4 4 4 47.09 35.58 64.42 0 2 3 Whitelist LUSC-US 0.87 1 NA 0 0.64 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 5 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 16 8453026 87606144 6 6 124 1 4 0 1 0 0.11 0 3 0 0 NA NA NA NA NA NA 47.09 1.45 98.46 0 2 1 Whitelist LUSC-US 0.54 0.01 0 0 0.48 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 12 0.05 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 17 19600924 78178768 1 3 124 0 2 0 0 1 0.11 1 3 NA 0 NA NA NA NA NA NA 47.09 32.17 67.82 1 2 1 Whitelist LUSC-US 0.62 1 NA 0 0.48 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 5 0.02 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 18 22672305 22828000 1 1 124 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 47.09 0 99.96 0 2 NA Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 19 59033737 59057447 1 2 124 0 0 1 0 1 0.39 0 2 0 NA NA NA NA 5 3 5 47.09 28.16 71.55 0 1 3 Whitelist LUSC-US 0.68 0.01 0 NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 3 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 20 7932284 52173234 1 10 124 4 1 0 2 3 0.17 0 7 0 0 7 3 5 8 4 5 47.09 98.85 0.07 3 3 1 Whitelist LUSC-US 0.54 0 0 0 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 17 0.07 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 21 28698562 29002201 1 1 124 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 47.09 0.63 76.72 0 1 2 Whitelist LUSC-US 0.62 0.42 NA NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 22 31123459 50970514 1 5 124 3 0 0 0 2 0.03 0 3 0 0 NA NA NA 4 4 4 47.09 52.58 46.77 1 3 2 Whitelist LUSC-US 0.45 0.02 0 0 0.33 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 8 0.03 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::0e2ee54a-51c9-4868-842d-a2a1c1cfb016 X 53500976 53580005 1 1 124 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 47.09 100 0 0 1 NA Whitelist LUSC-US 0.62 0.09 NA NA 0.59 0 No LUSC-US 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 LUSC 0.7 1.72 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26463 TCGA-21-1082 0e2ee54a-51c9-4868-842d-a2a1c1cfb016 male alive C34.3 61 NA 3644 NA Included Lung-SCC LUSC US 0 119.87 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 1 46921967 117117402 1 4 130 4 0 0 0 0 0.01 0.62 3 0 0 NA NA NA 10 3 4 42.44 63.99 32.93 1 1 0 Whitelist LUSC-US 0.21 0.84 0 0 0.16 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 8 0.03 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 2 32190864 242264236 1 7 130 3 2 0 1 1 0.34 1 18 0 0 18 7 13 18 7 12 42.44 2.24 95.07 1 2 3 Whitelist LUSC-US 0.77 1 0 0 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 13 0.05 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 3 133228262 137818758 3 3 130 2 0 1 0 0 0.3 0 1 0 0 NA NA NA 22 6 6 42.44 54.34 42.5 4 2 NA Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 4 1888665 100875829 1 7 130 3 1 1 0 2 0.28 1 6 0 0 6 3 3 8 4 4 42.44 56.18 41.24 1 1 2 Whitelist LUSC-US 0.62 1 0 0 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 12 0.05 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 5 NA NA 0 0 130 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.02 NA NA NA 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 0 0 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 6 2592217 125313784 1 4 130 2 0 1 1 0 0.57 0.46 6 0 0 6 3 6 7 4 7 42.44 32.67 67.15 0 1 2 Whitelist LUSC-US 0.68 0.7 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 8 0.03 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 7 28105990 148599937 1 5 130 4 1 0 0 0 0.04 1 9 0 0 9 7 9 10 8 10 42.44 53.83 45.97 0 2 3 Whitelist LUSC-US 0.45 1 0 0 0.36 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 10 0.04 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 8 32943464 40551569 3 3 130 0 1 1 1 0 0.8 0.32 6 0 0 6 3 4 13 5 5 42.44 43.78 56.11 1 3 4 Whitelist LUSC-US 0.87 0.57 0 0 0.84 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 9 30494166 77131479 1 5 130 2 1 0 1 1 0.57 0.36 10 0 0 10 3 4 13 3 4 42.44 21.85 77.44 2 2 1 Whitelist LUSC-US 0.93 0.61 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 9 0.03 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 10 5023477 114211858 1 10 130 2 0 2 1 5 0.53 0.02 5 0 0 5 5 5 6 6 6 42.44 82.78 13.88 2 1 2 Whitelist LUSC-US 0.86 0.08 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 15 0.06 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 11 78274193 109150841 1 2 130 1 1 0 0 0 0.57 1 2 0 0 NA NA NA NA NA NA 42.44 0.31 99.27 0 2 3 Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 12 2924129 18206978 1 2 130 1 0 1 0 0 0.57 0.84 4 0 0 4 0 3 8 3 4 42.44 18.68 81.24 0 2 3 Whitelist LUSC-US 0.68 0.97 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 13 63145412 72438876 1 5 130 0 1 0 1 3 0.57 0.05 2 0 0 NA NA NA NA NA NA 42.44 91.17 8.83 0 1 2 Whitelist LUSC-US 0.68 0.16 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 7 0.03 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 14 23435061 43720339 1 3 130 1 1 0 0 1 0.57 0.61 3 0 0 NA NA NA 8 5 6 42.44 60.15 36.15 12 1 2 Whitelist LUSC-US 0.87 0.82 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 5 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 15 81942005 81969762 1 1 130 0 1 0 0 0 0.39 0.79 1 0 NA NA NA NA NA NA NA 42.44 0 100 0 2 NA Whitelist LUSC-US 0.62 0.94 0 NA 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 16 82799681 83544296 1 1 130 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 4 4 42.44 23.25 76.65 0 1 2 Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 17 3903683 31574424 2 2 130 1 1 0 0 0 0.57 0.78 3 0 0 NA NA NA 6 0 4 42.44 37.81 57.56 1 1 2 Whitelist LUSC-US 0.68 0.94 0 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 18 NA NA 0 0 130 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LUSC-US NA 0.25 0 NA NA 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 0 0 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 19 41188155 48161753 1 2 130 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 42.44 0 99.83 0 2 NA Whitelist LUSC-US 0.54 1 NA 0 0.48 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 20 NA NA 0 0 130 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.77 NA NA NA 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 0 0 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 21 20076436 20133500 1 1 130 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.44 77.35 0 0 0 1 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db 22 19588692 36280311 1 2 130 1 1 0 0 0 0.57 0.2 1 NA 0 NA NA NA NA NA NA 42.44 2.65 97.35 0 2 NA Whitelist LUSC-US 0.68 0.42 NA 0 0.64 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::19f0cb8c-2e57-4310-967f-a9890f1605db X 9790969 44865939 1 3 130 3 0 0 0 0 0.03 0.42 1 0.19 0 NA NA NA NA NA NA 42.44 100 0 0 1 NA Whitelist LUSC-US 0.41 0.67 0.19 0 0.33 0 No LUSC-US 19f0cb8c-2e57-4310-967f-a9890f1605db LUSC 0.4 1.76 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27104 TCGA-18-4721 19f0cb8c-2e57-4310-967f-a9890f1605db male alive C34.3 74 NA 2754 NA Included Lung-SCC LUSC US 0 90.59 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 1 72569504 224916332 1 5 287 2 0 0 0 3 0.11 0 7 0 0 7 3 5 8 3 3 38.97 9.19 90.81 1 1 2 Whitelist LUSC-US 0.93 0 0 0 0.48 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 2 97260930 215237034 1 5 287 0 1 2 1 1 0.57 0.46 10 0 0 10 4 7 17 5 7 38.97 38.88 58.42 2 3 4 Whitelist LUSC-US 0.93 0.7 0 0 0.64 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 9 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 3 11549913 109256081 1 5 287 2 1 0 2 0 0.53 0 14 0 0 14 7 9 17 7 9 38.97 54.35 42.48 2 2 1 Whitelist LUSC-US 0.68 0.01 0 0 0.64 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 10 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 4 57742205 57936333 2 3 287 1 0 1 0 1 0.57 1 6 0 0 6 5 6 12 6 8 38.97 13.84 86.06 3 7 9 Whitelist LUSC-US 0.62 1 0 0 0.64 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 5 8531769 45801499 36 79 287 8 9 11 8 43 0.88 0 41 0 0 41 8 13 45 8 13 38.97 24.21 73.11 7 5 4 Whitelist LUSC-US 0.99 0 0 0 0.91 1 High confidence LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC With other complex events 115 0.2 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 6 38602468 38618713 1 1 287 0 0 1 0 0 0.39 0.38 2 0 0 NA NA NA 12 3 5 38.97 26.22 70.92 6 4 6 Whitelist LUSC-US 0.62 0.63 0 0 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 7 66055796 66609566 3 3 287 0 0 1 2 0 0.3 0.02 5 0 0 5 3 5 18 5 9 38.97 36.56 60.61 0 2 3 Whitelist LUSC-US 0.62 0.07 0 0 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 8 127118996 135131269 6 30 287 4 0 1 1 24 0.11 0 23 0 0 23 4 5 42 4 4 38.97 92.31 4.27 10 7 3 Whitelist LUSC-US 5 0.68 0 0 0 0.48 1 Low confidence LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC With other complex events 36 0.06 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 9 15140413 28840118 1 4 287 2 0 0 1 1 0.3 0.09 3 0 0 NA NA NA 15 3 3 38.97 79.73 20.11 0 2 5 Whitelist LUSC-US 0.68 0.25 0 0 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 10 42435420 59718719 1 6 287 1 1 1 0 3 0.8 0.48 14 0 0 14 3 9 14 3 9 38.97 6.52 93.31 8 2 3 Whitelist LUSC-US 0.68 0.72 0 0 0.84 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 9 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 11 14061533 17446406 4 4 287 1 1 2 0 0 0.57 0 5 0 0 5 0 4 36 7 9 38.97 56.57 43 0 3 5 Whitelist LUSC-US 0.68 0 0 0 0.64 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 12 NA NA 0 0 287 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.37 0 NA NA 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 13 94393838 94469191 2 2 287 2 0 0 0 0 0.11 0.87 3 0 0 NA NA NA 14 7 7 38.97 76.57 23.43 0 2 1 Whitelist LUSC-US 0.54 1 0 0 0.48 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 14 45253995 45581057 3 3 287 0 1 1 1 0 0.8 0.61 4 0 0 4 4 4 10 8 8 38.97 58.82 25.27 0 2 3 Whitelist LUSC-US 0.87 0.83 0 0 0.84 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 15 NA NA 0 0 287 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.11 NA NA NA 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 16 6878144 6910708 1 1 287 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 8 3 5 38.97 18.21 77.27 0 1 2 Whitelist LUSC-US 0.62 0.7 0 NA 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 17 NA NA 0 0 287 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 18 19629224 21808513 1 1 287 0 0 1 0 0 0.39 0.71 3 0 NA NA NA NA 11 4 4 38.97 59.27 36.09 0 1 2 Whitelist LUSC-US 0.62 0.9 0 NA 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 19 5969727 6991214 1 1 287 0 0 1 0 0 0.39 0.52 5 0 0 5 0 4 12 3 3 38.97 13.4 86.42 0 6 2 Whitelist LUSC-US 0.62 0.76 0 0 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 20 NA NA 0 0 287 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.55 NA NA NA 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 21 NA NA 0 0 287 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.52 NA NA NA 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 22 32336207 32357038 1 1 287 0 0 0 1 0 0.39 0.4 1 0 NA NA NA NA 6 3 3 38.97 15.79 84.21 0 1 NA Whitelist LUSC-US 0.62 0.65 0 NA 0.59 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 X 7315929 7682641 1 2 287 2 0 0 0 0 0.11 0.1 1 0 0 NA NA NA 5 5 5 38.97 96.02 3.98 0 1 NA Whitelist LUSC-US 0.54 0.27 0 0 0.48 1 No LUSC-US 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 LUSC 0.4 2.43 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 3 LUSC-US DO27025 TCGA-66-2744 1ee543d5-b8c0-4f79-8373-6bb6319f2ee2 male alive C34.3 71 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 1 10465 120052243 4 14 165 1 1 1 1 10 1 0 16 0 0 16 3 5 29 5 5 69.59 55.26 41.71 18 2 3 Whitelist LUSC-US 0.98 0 0 0 1 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 18 0.05 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 2 66614289 66644315 3 3 165 0 1 1 1 0 0.8 0.03 1 0 0 NA NA NA 20 10 10 69.59 86.03 13.86 0 4 NA Whitelist LUSC-US 0.87 0.12 0 0 0.84 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 6 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 3 143326907 193269619 17 28 165 4 5 5 3 11 0.89 0 53 0 0 53 5 5 69 5 5 69.59 66.09 33.76 0 4 5 Whitelist LUSC-US 0.98 0 0 0 0.92 0 Low confidence LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC With other complex events 45 0.14 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 4 108691100 130740577 3 4 165 0 0 1 2 1 0.3 0 6 0 0 6 4 6 17 5 5 69.59 48.68 51.31 0 3 2 Whitelist LUSC-US 0.68 0.01 0 0 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 7 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 5 21741718 121188695 1 8 165 3 0 0 0 5 0.03 0.87 5 0 0 5 4 5 8 5 5 69.59 25.64 71.69 0 4 5 Whitelist LUSC-US 0.41 1 0 0 0.33 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 11 0.03 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 6 18273096 65357689 1 4 165 2 0 0 1 1 0.3 0.32 13 0 0 13 4 4 18 4 4 69.59 99.86 0.01 0 3 4 Whitelist LUSC-US 0.68 0.57 0 0 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 7 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 7 49602909 49614161 1 1 165 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 69.59 99.78 0 0 3 4 Whitelist LUSC-US 0.62 0.06 NA NA 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 2 0.01 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 8 NA NA 0 0 165 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.36 0 NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 9 NA NA 0 0 165 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.67 NA NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 10 77680756 77692428 1 1 165 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 69.59 99.82 0 0 3 NA Whitelist LUSC-US 0.62 0.13 NA NA 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 2 0.01 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 11 45737182 45797375 1 1 165 0 1 0 0 0 0.39 0.09 2 0 NA NA NA NA 7 5 5 69.59 99.53 0.04 1 3 4 Whitelist LUSC-US 0.62 0.26 0 NA 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 2 0.01 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 12 34275549 54586392 1 3 165 3 0 0 0 0 0.03 0.85 3 0 0 NA NA NA 5 5 5 69.59 96.24 0 1 4 3 Whitelist LUSC-US 0.41 0.99 0 0 0.33 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 6 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 13 NA NA 0 0 165 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.16 NA NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 14 NA NA 0 0 165 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.96 0 NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 15 81126949 95557815 1 4 165 0 4 0 0 0 0.01 0.15 8 0 0 8 8 8 14 9 9 69.59 95.12 0 0 5 6 Whitelist LUSC-US 0.21 0.34 0 0 0.16 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 8 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 16 NA NA 0 0 165 0 0 0 0 0 NA 1 NA 0.04 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0.04 NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 17 5226115 5323377 1 1 165 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 3 3 69.59 75.09 24.91 0 1 2 Whitelist LUSC-US 0.62 0.34 NA NA 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 2 0.01 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 18 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 19 19266207 39364013 1 4 165 1 1 0 0 2 0.57 0.05 5 0 0 5 5 5 6 6 6 69.59 61.19 31.54 0 3 2 Whitelist LUSC-US 0.62 0.15 0 0 0.64 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 6 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 20 4676450 4696400 1 1 165 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 69.59 93 0 0 4 NA Whitelist LUSC-US 0.62 0.52 NA NA 0.59 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 2 0.01 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 21 NA NA 0 0 165 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.9 NA NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de 22 NA NA 0 0 165 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 0 0 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f11de87-a5fe-49fd-80c1-e279b2bc69de X 414930 132964528 1 3 165 1 0 1 0 1 0.57 1 6 0 0 6 3 6 7 3 4 69.59 67.72 31.79 2 4 2 Whitelist LUSC-US 0.62 1 0 0 0.64 0 No LUSC-US 1f11de87-a5fe-49fd-80c1-e279b2bc69de LUSC 0.63 3.26 Lung-SCC NA 5 0.02 frameshift_insertion,17_7577145_T_-,CN:2 4 LUSC-US DO26987 TCGA-60-2711 1f11de87-a5fe-49fd-80c1-e279b2bc69de female alive C34.9 64 NA 889 NA Included Lung-SCC LUSC US 0 29.24 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 1 1284972 193362741 1 9 602 7 2 0 0 0 0 0 15 0 0 15 4 7 16 5 5 53.28 99.78 0.22 0 3 2 Whitelist LUSC-US 0.12 0 0 0 0.08 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 18 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 2 12271877 18745971 7 7 602 1 2 3 1 0 0.67 1 8 0 0 8 3 5 40 5 6 53.28 94.48 2.83 2 3 4 Whitelist LUSC-US 0.77 1 0 0 0.74 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 14 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 3 77709025 174601176 16 26 602 2 5 5 4 10 0.68 0.02 49 0 0 49 5 9 58 5 6 53.28 64.47 32.38 1 7 3 Whitelist LUSC-US 21_4 0.82 0.1 0 0 0.76 0 Low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 42 0.03 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 4 2720902 165169009 1 21 602 1 5 0 1 14 0.04 0.01 24 0 0 24 5 7 25 5 7 53.28 21.03 76.37 2 2 3 Whitelist LUSC-US 11_12_3 0.84 0.03 0 0 0.38 0 Linked to low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 28 0.02 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 5 59210257 81431102 1 4 602 2 2 0 0 0 0.26 0 7 0 0 7 3 6 9 3 4 53.28 26.15 71.18 1 2 1 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 8 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 6 47045197 150310817 9 15 602 3 3 1 2 6 0.75 0.09 26 0 0 26 9 14 27 9 12 53.28 97.19 0 1 4 5 Whitelist LUSC-US 11 0.68 0.24 0 0 0.83 0 Linked to low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 24 0.02 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 False positive; manually removed LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 7 21757166 127688791 1 7 602 2 0 2 0 3 0.26 0 13 0 0 13 4 6 16 4 6 53.28 90.77 6.68 0 2 4 Whitelist LUSC-US 0.77 0 0 0 0.59 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 11 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 8 40861103 87010834 5 43 602 1 2 1 1 38 0.9 0 18 0 0 18 4 7 41 7 7 53.28 41.85 54.72 0 2 3 Whitelist LUSC-US 11_18 0.91 0 0 0 0.92 0 Linked to high confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 48 0.04 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 9 NA NA 0 0 602 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0 NA NA NA 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 0 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 10 21322617 80821727 1 2 602 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 53.28 0.09 99.74 0 2 1 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 4 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 11 46508302 111537992 112 195 602 27 31 26 28 83 0.92 0 129 0 0 129 5 8 131 7 8 53.28 47.99 51.59 23 2 3 Whitelist LUSC-US 12_18_4_6 0.97 0 0 0 0.94 0 Low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 307 0.25 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 12 4696888 43872965 7 20 602 3 1 0 3 13 0.28 0.15 14 0 0 14 4 5 27 5 5 53.28 98.92 1 4 6 2 Whitelist LUSC-US 11_18 0.86 0.35 0 0 0.59 0 Low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 27 0.02 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 13 NA NA 0 0 602 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0 NA NA NA 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 0 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 14 30381002 39864613 1 3 602 2 1 0 0 0 0.3 0 5 0 0 5 3 5 7 4 4 53.28 4.01 80.08 0 2 1 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 6 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 15 25836628 97540319 1 3 602 1 0 1 0 1 0.57 0.03 3 0 0 NA NA NA 10 4 5 53.28 95.12 0 0 3 6 Whitelist LUSC-US 0.62 0.1 0 0 0.64 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 5 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 16 86427839 86442776 1 1 602 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 53.28 99.9 0 0 4 NA Whitelist LUSC-US 0.62 0 NA NA 0.59 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 2 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 17 57917497 58127300 2 2 602 0 2 0 0 0 0.11 0.02 3 0 0 NA NA NA 10 3 6 53.28 61.1 34.45 0 4 5 Whitelist LUSC-US 0.54 0.07 0 0 0.48 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 4 0 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 18 21140095 63388413 74 159 602 15 19 20 20 85 0.82 0 81 0 0 81 11 19 93 11 11 53.28 82.69 12.61 3 4 3 Whitelist LUSC-US 11_12 0.85 0 0 0 0.86 0 High confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 233 0.19 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 19 261486 16394685 1 5 602 1 0 1 0 3 0.57 1 6 0 0 6 3 5 12 4 5 53.28 7.16 92.46 0 5 2 Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 7 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 20 14777156 50701074 1 6 602 3 0 0 0 3 0.03 0.05 7 0 0 7 4 7 7 4 4 53.28 52.85 40.15 0 2 4 Whitelist LUSC-US 11 0.25 0.16 0 0 0.33 0 Linked to low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 9 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 21 14740825 17506648 10 13 602 2 1 3 4 3 0.57 0 12 0 0 12 5 6 23 6 6 53.28 26.9 50.45 3 3 4 Whitelist LUSC-US 0.62 0 0 0 0.64 0 Low confidence LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC With other complex events 23 0.02 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 22 20254754 36917872 1 7 602 1 1 1 1 3 1 0.7 12 0 0 12 3 5 14 4 4 53.28 100 0 0 3 5 Whitelist LUSC-US 0.96 0.9 0 0 1 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 11 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::1f6b2aca-7357-40d1-ba7a-99227d9900a2 X 146599573 154470291 3 4 602 0 1 2 0 1 0.3 0 4 0 0 4 4 4 4 4 4 53.28 0.34 99.15 0 2 3 Whitelist LUSC-US 0.68 0 0 0 0.59 0 No LUSC-US 1f6b2aca-7357-40d1-ba7a-99227d9900a2 LUSC 0.86 2.97 Lung-SCC NA 7 0.01 stopgain,17_7579485_A_C,CN:2 3 LUSC-US DO26806 TCGA-37-4135 1f6b2aca-7357-40d1-ba7a-99227d9900a2 male alive C34.3 68 NA 207 NA Included Lung-SCC LUSC US 0 6.81 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 1 27340623 27375711 3 3 119 1 0 1 1 0 0.8 0.5 1 0 0 NA NA NA 6 3 3 56.97 95.76 0.92 0 3 NA Whitelist LUSC-US 0.87 0.74 0 0 0.84 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 2 23668275 172164109 1 7 119 1 1 1 0 4 0.8 1 16 0 0 16 4 6 18 4 4 56.97 94.54 2.5 25 6 4 Whitelist LUSC-US 0.77 1 0 0 0.84 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 10 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 3 13718826 189066680 1 8 119 1 2 0 1 4 0.57 0.72 12 0 0 12 3 6 13 3 4 56.97 72.17 24.37 2 8 2 Whitelist LUSC-US 0.87 0.9 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 12 0.05 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 4 139007152 140184090 1 1 119 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 56.97 11.82 87.97 0 2 3 Whitelist LUSC-US 0.62 0.03 NA NA 0.59 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 5 24239347 24254062 2 2 119 0 0 1 1 0 0.57 0.45 1 0 0 NA NA NA 4 4 4 56.97 25.49 71.85 1 4 NA Whitelist LUSC-US 0.68 0.7 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 6 35729231 88855564 2 6 119 0 3 1 0 2 0.11 0.25 10 0 0 10 4 5 13 7 7 56.97 74.35 22.82 2 3 2 Whitelist LUSC-US 0.25 0.49 0 0 0.48 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 10 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 7 703650 107931849 1 6 119 2 1 0 0 3 0.3 0.04 5 0 0 5 3 3 7 3 4 56.97 99.93 0 1 6 4 Whitelist LUSC-US 0.62 0.13 0 0 0.59 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 9 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 8 37337958 43080095 5 6 119 1 1 2 1 1 0.9 0 16 0 0 16 3 5 36 4 7 56.97 72.24 24.19 0 4 2 Whitelist LUSC-US 0.93 0 0 0 0.92 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 11 0.05 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 9 86980963 87080786 1 1 119 0 0 0 1 0 0.39 0.15 2 0 NA NA NA NA 12 3 3 56.97 59.86 37.03 0 4 6 Whitelist LUSC-US 0.62 0.35 0 NA 0.59 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 10 13339350 92473952 1 9 119 2 1 1 1 4 0.9 0.01 18 0 0 18 5 6 22 6 6 56.97 5.76 90.77 4 2 4 Whitelist LUSC-US 0.97 0.06 0 0 0.92 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 14 0.06 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 11 NA NA 0 0 119 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.16 NA NA NA 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 12 121217961 128687168 2 2 119 2 0 0 0 0 0.11 0.83 3 0 0 NA NA NA 4 3 3 56.97 71.46 24.8 1 3 5 Whitelist LUSC-US 0.54 0.97 0 0 0.48 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 13 98724195 107486844 1 2 119 0 0 1 1 0 0.57 0.31 6 0 0 6 3 4 9 3 3 56.97 6.64 93.36 0 2 0 Whitelist LUSC-US 0.68 0.56 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 14 99733197 99780629 1 1 119 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA 4 3 4 56.97 96.29 0 0 4 NA Whitelist LUSC-US 0.62 0.81 NA NA 0.59 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 15 75057909 77691407 1 3 119 1 1 0 0 1 0.57 0.39 3 0 0 NA NA NA NA NA NA 56.97 99.82 0 0 3 1 Whitelist LUSC-US 0.87 0.64 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 16 NA NA 0 0 119 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.63 NA NA NA 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 17 11806432 79808267 1 4 119 0 1 1 0 2 0.57 0.14 9 0 0 9 3 5 10 3 5 56.97 70.5 24.95 1 3 1 Whitelist LUSC-US 0.68 0.34 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 18 5463905 25340869 1 5 119 0 1 1 0 3 0.57 0.25 5 0 0 5 4 5 6 4 4 56.97 31.63 68.33 11 2 4 Whitelist LUSC-US 0.93 0.5 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 7 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 19 37940386 45249397 1 3 119 1 1 0 0 1 0.57 0.01 6 0 0 6 3 4 17 4 4 56.97 87.35 5.37 1 8 7 Whitelist LUSC-US 0.62 0.04 0 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 20 16064340 40126419 1 2 119 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 56.97 99.03 0 0 4 3 Whitelist LUSC-US 0.68 1 NA 0 0.64 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 21 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 22 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::220be009-8f1e-4a77-ab04-3220b5f87ea6 X 80820189 81401221 1 1 119 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 8 6 8 56.97 46.35 50.28 1 2 3 Whitelist LUSC-US 0.62 0.97 0 NA 0.59 0 No LUSC-US 220be009-8f1e-4a77-ab04-3220b5f87ea6 LUSC 0.21 3.14 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:3 3 LUSC-US DO26599 TCGA-21-1076 220be009-8f1e-4a77-ab04-3220b5f87ea6 female alive C34.3 54 NA 1852 NA Included Lung-SCC LUSC US 0 60.92 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 1 160254597 182151242 6 6 92 2 0 2 2 0 0.57 0 1 0 0 NA NA NA 8 5 5 37.37 50.38 46.59 0 3 NA Whitelist LUSC-US 0.68 0.02 0 0 0.64 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 12 0.07 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 2 124378520 225481223 26 30 92 7 10 5 4 4 0.36 0 15 0 0 15 13 15 15 13 13 37.37 8.37 91.53 0 2 1 Whitelist LUSC-US 0.8 0 0 0 0.59 1 High confidence LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC Canonical without polyploidization 56 0.3 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 3 48622918 150057344 1 5 92 0 2 0 0 3 0.11 0.54 7 0 0 7 4 4 7 4 4 37.37 72.03 24.43 4 1 2 Whitelist LUSC-US 0.68 0.77 0 0 0.48 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 7 0.04 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 4 15155217 15331965 5 5 92 1 2 1 1 0 0.9 0.06 4 0 0 4 4 4 7 7 7 37.37 99.98 0 0 0 1 Whitelist LUSC-US 0.93 0.18 0 0 0.92 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 10 0.05 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 5 49513914 49540313 1 1 92 0 0 0 1 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 37.37 97.32 0 0 1 3 Whitelist LUSC-US 0.62 0.32 NA NA 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 6 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 7 16953333 17239613 1 1 92 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 37.37 0 99.78 0 2 NA Whitelist LUSC-US 0.62 0.2 NA NA 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 8 141079367 141108532 1 1 92 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 4 4 37.37 96.47 0 0 1 3 Whitelist LUSC-US 0.62 0.26 NA NA 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 9 86918655 87395984 1 1 92 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 5 4 5 37.37 33.8 63.09 0 2 3 Whitelist LUSC-US 0.62 0.52 NA NA 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 10 74265588 75649768 2 2 92 1 1 0 0 0 0.57 0.07 2 0 0 NA NA NA 6 3 5 37.37 46.9 52.99 0 1 3 Whitelist LUSC-US 0.68 0.22 0 0 0.64 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 11 NA NA 0 0 92 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 12 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 13 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 14 67068267 67514386 1 1 92 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 37.37 0.42 98.67 0 1 2 Whitelist LUSC-US 0.62 0.63 NA NA 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 15 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 16 NA NA 0 0 92 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 17 13584024 73471169 1 3 92 1 1 1 0 0 0.8 0.74 1 0.01 0 NA NA NA NA NA NA 37.37 0 100 0 2 NA Whitelist LUSC-US 0.87 0.91 0.01 0 0.84 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 6 0.03 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 18 5874766 72849006 1 5 92 3 2 0 0 0 0.14 0.1 3 0 0 NA NA NA NA NA NA 37.37 3.1 96.83 1 2 1 Whitelist LUSC-US 0.62 0.27 0 0 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 10 0.05 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 19 10611484 51914844 1 5 92 2 0 2 0 1 0.26 0.01 7 0 0 7 4 7 8 4 4 37.37 78.83 13.9 0 1 2 Whitelist LUSC-US 0.62 0.05 0 0 0.59 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 9 0.05 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 20 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 21 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d 22 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::305f72a8-069b-410b-bbe4-4ecb761c748d X NA NA 0 0 92 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.25 NA NA NA 1 No LUSC-US 305f72a8-069b-410b-bbe4-4ecb761c748d LUSC 0.72 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO26553 TCGA-22-5485 305f72a8-069b-410b-bbe4-4ecb761c748d female deceased C34.1 58 916 NA NA Included Lung-SCC LUSC US 1 30.13 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 1 90363157 167689839 1 9 154 2 3 0 0 4 0.14 0.23 11 0 0 11 3 4 11 3 4 73.29 48.37 48.61 0 3 2 Whitelist LUSC-US 5 0.62 0.47 0 0 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 14 0.05 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 2 128448365 128474396 1 1 154 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA 6 4 5 73.29 83.9 16 1 4 NA Whitelist LUSC-US 0.62 0.08 0 NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 3 121469766 183835935 16 18 154 3 5 4 4 2 0.92 0 28 0 0 28 4 4 32 6 7 73.29 45.89 50.82 7 12 2 Whitelist LUSC-US 0.87 0 0 0 0.94 0 Low confidence LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC With other complex events 34 0.11 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 4 91090854 127661048 1 2 154 1 1 0 0 0 0.57 0.87 4 0 0 4 3 4 12 4 5 73.29 14.03 83.59 0 2 1 Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 4 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 5 1891003 59309259 1 7 154 1 1 1 1 3 1 0.87 9 0 0 9 8 9 12 9 9 73.29 52.96 46.91 0 3 4 Whitelist LUSC-US 0.77 1 0 0 1 0 Linked to low confidence LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC After polyploidization 11 0.04 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 6 125292878 154356090 1 4 154 1 3 0 0 0 0.11 0.17 6 0 0 6 3 6 8 3 8 73.29 99.85 0 1 3 5 Whitelist LUSC-US 0.54 0.39 0 0 0.48 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 8 0.03 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 7 8021176 96585488 6 20 154 3 1 2 0 14 0.34 0 38 0 0 38 4 5 42 4 5 73.29 97.4 0 5 4 15 Whitelist LUSC-US 5 0.86 0 0 0 0.59 0 Low confidence LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC With other complex events 26 0.08 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 8 31336203 128291081 1 13 154 1 3 1 1 7 0.57 0.02 11 0 0 11 3 5 12 3 3 73.29 75.21 21.37 23 4 5 Whitelist LUSC-US 0.68 0.07 0 0 0.64 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 19 0.06 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 9 95814700 136038682 1 2 154 2 0 0 0 0 0.11 0.67 3 0 0 NA NA NA 9 5 5 73.29 94.83 4.47 2 4 2 Whitelist LUSC-US 0.54 0.88 0 0 0.48 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 4 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 10 5058132 129455112 1 12 154 3 2 0 0 7 0.14 0.08 7 0 0 7 3 4 8 3 3 73.29 99.82 0 0 4 5 Whitelist LUSC-US 0.62 0.22 0 0 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 17 0.06 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 11 67201270 67279105 1 1 154 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 5 5 73.29 95.36 4.22 1 2 4 Whitelist LUSC-US 0.62 0.59 NA NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 12 91129219 91299382 1 1 154 0 1 0 0 0 0.39 0.56 2 0 NA NA NA NA NA NA NA 73.29 99.98 0 0 4 7 Whitelist LUSC-US 0.62 0.79 0 NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 13 105072686 105087125 1 1 154 0 0 0 1 0 0.39 1 1 0 NA NA NA NA 5 5 5 73.29 65.32 34.68 0 3 NA Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 14 104361707 104378988 1 2 154 0 1 0 1 0 0.57 0.64 2 NA 0 NA NA NA 4 3 3 73.29 96.29 0 1 4 6 Whitelist LUSC-US 0.68 0.85 NA 0 0.64 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 4 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 15 26770786 26886145 1 1 154 1 0 0 0 0 0.39 0.21 2 0 NA NA NA NA NA NA NA 73.29 99.9 0 0 3 4 Whitelist LUSC-US 0.62 0.44 0 NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 16 15982998 16000463 1 1 154 0 1 0 0 0 0.39 0.61 2 0 NA NA NA NA NA NA NA 73.29 99.9 0 0 4 5 Whitelist LUSC-US 0.62 0.83 0 NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 17 NA NA 0 0 154 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 NA NA NA 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 0 0 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 18 3457028 5205682 4 4 154 1 2 0 1 0 0.57 0 9 0 0 9 3 5 17 4 5 73.29 95.16 4.8 0 7 5 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 8 0.03 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 19 37838838 37887714 1 1 154 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 73.29 99.49 0 1 3 NA Whitelist LUSC-US 0.62 0.78 NA NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 20 36350106 50378534 1 2 154 2 0 0 0 0 0.11 0.58 3 0 0 NA NA NA 4 4 4 73.29 99.01 0 0 4 3 Whitelist LUSC-US 0.54 0.8 0 0 0.48 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 4 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 21 40578541 40646567 1 1 154 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 73.29 77.35 0 0 3 NA Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 22 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 0 0 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::3666bc65-8e40-409e-9a1f-41583dd6d978 X 69167287 72960182 1 1 154 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 8 4 4 73.29 39.02 57.59 0 2 6 Whitelist LUSC-US 0.62 0.1 NA NA 0.59 0 No LUSC-US 3666bc65-8e40-409e-9a1f-41583dd6d978 LUSC 0.64 3.53 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26512 TCGA-68-7755 3666bc65-8e40-409e-9a1f-41583dd6d978 female alive C34.3 60 NA 83 NA Included Lung-SCC LUSC US 0 2.73 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 1 NA NA 0 0 234 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 10 5 6 0 0 0 0 0 0 Whitelist LUSC-US NA 0 0 NA NA 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 2 NA NA 0 0 234 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.01 0 NA NA 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 3 84207634 196397331 30 35 234 6 10 8 6 5 0.69 0 76 0 0 76 5 5 78 5 5 54.99 54.48 42.32 16 8 5 Whitelist LUSC-US 0.8 0 0 0 0.77 1 Low confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC With other complex events 65 0.14 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 4 99229387 185063401 1 3 234 1 0 0 0 2 0.39 0 3 0 0 NA NA NA NA NA NA 54.99 0 99.98 0 2 1 Whitelist LUSC-US 3 0.87 0.01 0 0 0.59 1 Linked to low confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC With other complex events 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 5 7530996 177091320 1 4 234 1 1 0 0 2 0.57 0.01 10 0.06 0.01 10 4 4 13 4 4 54.99 27.73 69.6 0 4 2 Whitelist LUSC-US 3 0.68 0.06 0.06 0.01 0.64 1 Linked to low confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC With other complex events 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 6 36995647 139099666 2 4 234 1 1 1 1 0 1 0.89 8 0 0 8 4 5 12 5 9 54.99 99.85 0 0 3 4 Whitelist LUSC-US 1 1 0 0 1 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 7 112436154 113211884 2 2 234 0 1 1 0 0 0.57 0.01 3 0 0 NA NA NA 5 3 4 54.99 99.78 0 0 4 6 Whitelist LUSC-US 0.68 0.04 0 0 0.64 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 8 25033378 41733004 1 2 234 2 0 0 0 0 0.11 0.1 7 0 0 7 3 6 10 5 8 54.99 55.94 43.52 0 4 2 Whitelist LUSC-US 0.54 0.26 0 0 0.48 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 9 1296608 20464401 13 13 234 3 1 6 3 0 0.27 0 15 0 0 15 7 7 33 8 8 54.99 99.29 0.01 20 4 3 Whitelist LUSC-US 0.62 0 0 0 0.59 1 High confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC With other complex events 26 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 10 NA NA 0 0 234 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0 NA NA NA 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 11 8194416 78995778 2 4 234 1 0 1 2 0 0.57 0.44 4 0 0 4 0 3 7 3 3 54.99 97.66 1.92 0 0 1 Whitelist LUSC-US 0.68 0.69 0 0 0.64 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 12 113798304 115172525 1 2 234 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 5 3 5 54.99 99.94 0.05 0 4 2 Whitelist LUSC-US 0.54 0.04 0 0 0.48 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 13 33632040 110196697 1 4 234 0 4 0 0 0 0.01 0.37 9 0 0 9 5 9 9 5 9 54.99 0.98 99.02 1 2 3 Whitelist LUSC-US 0.21 0.62 0 0 0.16 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 14 29694281 42596449 8 8 234 2 1 3 2 0 0.8 0.46 9 0 0 9 4 5 12 4 4 54.99 31.18 65.11 2 2 5 Whitelist LUSC-US 0.87 0.7 0 0 0.84 1 Low confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC With other complex events 16 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 15 44875433 52409320 1 2 234 2 0 0 0 0 0.11 0.43 7 0 0 7 0 3 9 3 3 54.99 57.71 42.16 0 3 0 Whitelist LUSC-US 0.54 0.68 0 0 0.48 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 16 15832794 16153386 1 1 234 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA 6 3 3 54.99 55.63 39.45 0 4 NA Whitelist LUSC-US 0.62 0.27 NA NA 0.59 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 17 27590796 58037805 1 3 234 0 2 1 0 0 0.3 0.84 1 0 0 NA NA NA NA NA NA 54.99 73.47 26.53 0 4 NA Whitelist LUSC-US 0.62 0.98 0 0 0.59 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 18 11877344 11926441 2 2 234 0 0 1 1 0 0.57 0.42 2 0 0 NA NA NA 6 3 3 54.99 93.03 6.96 0 4 5 Whitelist LUSC-US 0.68 0.67 0 0 0.64 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 19 1126458 44443088 2 2 234 0 0 1 1 0 0.57 0.81 6 0.02 0 6 0 3 9 0 3 54.99 72.51 27.31 0 2 9 Whitelist LUSC-US 0.68 0.96 0.03 0 0.64 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 20 30228743 46041629 1 2 234 0 1 0 1 0 0.57 0.5 6 0 0 6 3 4 8 3 3 54.99 12.52 79.14 0 2 6 Whitelist LUSC-US 0.68 0.74 0 0 0.64 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 21 NA NA 0 0 234 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.77 NA NA NA 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e 22 NA NA 0 0 234 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.77 NA NA NA 1 No LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::376dfd27-68e8-4a1a-9c4f-5064279b2a9e X 714035 155073186 55 55 234 13 16 14 12 0 0.89 0 6 0 0 6 4 6 6 4 4 54.99 5.27 94.15 9 2 1 Whitelist LUSC-US 0.93 0 0 0 0.92 1 Low confidence LUSC-US 376dfd27-68e8-4a1a-9c4f-5064279b2a9e LUSC 0.44 3.03 Lung-SCC Canonical without polyploidization 110 0.24 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 LUSC-US DO27318 TCGA-33-4586 376dfd27-68e8-4a1a-9c4f-5064279b2a9e male deceased C34.3 57 428 NA NA Included Lung-SCC LUSC US 1 14.08 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 1 71829305 246323132 19 20 113 7 4 4 4 1 0.7 0 38 0 0 38 6 11 52 6 9 60.85 69.04 30.96 11 5 4 Whitelist LUSC-US 0.86 0 0 0 0.78 1 Low confidence LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC With other complex events 39 0.17 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 2 101819026 217029482 2 4 113 2 1 1 0 0 0.57 0.74 3 0 0 NA NA NA 10 3 6 60.85 97.22 0.1 0 3 2 Whitelist LUSC-US 0.68 0.91 0 0 0.64 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 8 0.04 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 3 119032296 119155110 3 3 113 0 1 1 1 0 0.8 0.36 4 0 0 4 4 4 9 4 4 60.85 52.72 44.12 0 6 7 Whitelist LUSC-US 0.87 0.61 0 0 0.84 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 4 NA NA 0 0 113 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.04 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 5 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 6 2146480 15990330 1 3 113 2 1 0 0 0 0.3 0.05 4 0 0 4 3 4 11 3 5 60.85 53.17 46.7 0 4 2 Whitelist LUSC-US 0.62 0.16 0 0 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 7 NA NA 0 0 113 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.12 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 8 5007085 8760462 1 1 113 1 0 0 0 0 0.39 1 1 0 0 NA NA NA 4 3 4 60.85 81.57 18.42 0 3 NA Whitelist LUSC-US 0.62 1 0 0 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 9 21616519 136467696 12 17 113 2 6 2 2 5 0.26 0 9 0 0 9 7 9 10 7 7 60.85 99.3 0 18 3 4 Whitelist LUSC-US 0.62 0 0 0 0.59 1 High confidence LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC After polyploidization 29 0.13 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 10 123260506 123323593 1 1 113 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA 5 5 5 60.85 0.05 99.78 0 1 2 Whitelist LUSC-US 0.62 0.4 NA NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 11 48693815 48833556 1 1 113 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 60.85 96.54 0 0 3 NA Whitelist LUSC-US 0.62 0.2 NA NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 12 NA NA 0 0 113 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.21 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 13 73929710 74091047 1 1 113 0 1 0 0 0 0.39 0.6 2 0 NA NA NA NA 6 5 5 60.85 79.42 20.58 0 3 4 Whitelist LUSC-US 0.62 0.81 0 NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 14 102756786 102867288 1 1 113 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 60.85 0.65 95.64 0 2 NA Whitelist LUSC-US 0.62 0.81 NA NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 15 76040519 76095817 1 1 113 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 6 5 5 60.85 95.1 0 0 4 5 Whitelist LUSC-US 0.62 0.63 NA NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 16 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 17 19908242 21344052 1 3 113 1 0 0 1 1 0.57 0.55 6 0 0 6 4 6 6 4 6 60.85 69.78 24.73 2 2 3 Whitelist LUSC-US 0.62 0.78 0 0 0.64 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 18 NA NA 0 0 113 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.93 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 19 6420804 11864995 3 3 113 1 0 1 1 0 0.8 0.02 1 0 0 NA NA NA 4 0 3 60.85 99.83 0 0 3 NA Whitelist LUSC-US 0.87 0.1 0 0 0.84 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 20 NA NA 0 0 113 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 21 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 22 45415596 45440083 1 1 113 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 0 3 60.85 88.89 0 0 4 7 Whitelist LUSC-US 0.62 1 NA NA 0.59 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::395babb3-3f5d-4e71-a675-af4443f23028 X NA NA 0 0 113 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.16 NA NA NA 1 No LUSC-US 395babb3-3f5d-4e71-a675-af4443f23028 LUSC 0.38 3.13 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_T_C,CN:2 4 LUSC-US DO26459 TCGA-85-8052 395babb3-3f5d-4e71-a675-af4443f23028 male alive C34.1 53 NA 16 NA Included Lung-SCC LUSC US 0 0.53 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 1 NA NA 0 0 85 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 12 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0 NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 2 57941619 209093580 1 10 85 2 1 0 2 5 0.53 0 16 0 0 16 3 5 23 3 4 47.99 79.26 20.62 2 3 28 Whitelist LUSC-US 4 0.86 0 0 0 0.64 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 15 0.09 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 3 24434657 24502410 1 1 85 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 47.99 52.49 44.36 0 2 NA Whitelist LUSC-US 0.62 0.53 NA NA 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 4 19793590 190853237 1 7 85 0 2 0 1 4 0.3 0.28 14 0 0 14 5 7 16 5 7 47.99 18.06 79.49 4 2 3 Whitelist LUSC-US 0.77 0.52 0 0 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 10 0.06 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 5 26555719 26695152 2 2 85 0 1 0 1 0 0.57 0.11 2 0 0 NA NA NA 8 3 3 47.99 25.6 71.73 0 4 5 Whitelist LUSC-US 0.68 0.29 0 0 0.64 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 4 0.02 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 6 63412717 63448477 1 1 85 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA 12 3 5 47.99 34.02 62.99 19 1 2 Whitelist LUSC-US 0.62 0.96 0 NA 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 7 101519217 118575996 3 3 85 2 1 0 0 0 0.3 0 7 0 0 7 5 6 15 7 7 47.99 76.49 23.27 5 4 6 Whitelist LUSC-US 0.62 0.01 0 0 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 6 0.04 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 8 3608548 82736889 1 2 85 1 0 0 1 0 0.57 0.8 5 NA 0.04 5 3 4 6 3 3 47.99 66.75 29.34 0 5 1 Whitelist LUSC-US 0.68 0.95 NA 0.04 0.64 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 4 0.02 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 9 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 10 NA NA 0 0 85 0 0 0 0 0 NA 0.6 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 0 NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 11 68317399 98681385 1 6 85 0 0 2 0 4 0.11 0.01 20 0 0 20 3 3 27 3 3 47.99 11.6 87.97 5 2 4 Whitelist LUSC-US 0.62 0.03 0 0 0.48 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 8 0.05 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 12 NA NA 0 0 85 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.69 NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 13 57941257 57951754 1 1 85 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 47.99 0 100 0 2 NA Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 14 25518422 50524422 1 3 85 1 1 0 0 1 0.57 0.02 15 0 0 15 3 5 22 4 4 47.99 22.65 76.44 1 2 3 Whitelist LUSC-US 0.62 0.07 0 0 0.64 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 5 0.03 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 15 22315142 88044849 1 2 85 2 0 0 0 0 0.11 1 5 NA 0 5 4 5 7 4 4 47.99 27.05 68.05 18 2 3 Whitelist LUSC-US 0.54 1 NA 0 0.48 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 4 0.02 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 16 30138886 30150500 1 1 85 0 1 0 0 0 0.39 0.03 1 0 NA NA NA NA 11 3 3 47.99 67.8 27.67 0 3 NA Whitelist LUSC-US 0.62 0.1 0 NA 0.59 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 17 NA NA 0 0 85 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.91 NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 18 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 19 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 20 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 21 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a 22 NA NA 0 0 85 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.23 NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3d1f4059-2220-45b4-a4d2-b14f76cec96a X NA NA 0 0 85 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.69 NA NA NA 0 No LUSC-US 3d1f4059-2220-45b4-a4d2-b14f76cec96a LUSC 0.48 2.79 Lung-SCC NA 0 0 NA 3 LUSC-US DO27484 TCGA-60-2726 3d1f4059-2220-45b4-a4d2-b14f76cec96a male deceased C34.2 56 358 NA NA Included Lung-SCC LUSC US 1 11.78 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 1 234564295 234587507 1 1 149 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 54.13 48.28 48.75 0 3 NA Whitelist LUSC-US 0.62 0.06 0 NA 0.59 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 2 32906963 154953739 1 5 149 2 0 0 0 3 0.11 0.14 2 0 0 NA NA NA NA NA NA 54.13 77.91 21.99 0 2 4 Whitelist LUSC-US 0.68 0.33 0 0 0.48 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 3 127181807 182963368 5 10 149 1 1 2 1 5 0.9 0 31 0 0 31 4 5 46 4 5 54.13 13.63 86.33 0 8 10 Whitelist LUSC-US 0.86 0 0 0 0.92 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 15 0.05 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 4 84044762 155178759 16 16 149 4 4 3 5 0 0.92 0 13 0 0 13 3 7 16 3 7 54.13 59.04 40.67 0 3 2 Whitelist LUSC-US 0.95 0 0 0 0.94 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 32 0.11 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 5 46041125 160958576 1 2 149 1 0 0 1 0 0.57 0.03 4 0 0 4 3 4 5 3 3 54.13 25.49 71.81 2 2 1 Whitelist LUSC-US 0.68 0.1 0 0 0.64 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 6 54649567 151195948 1 5 149 2 0 0 0 3 0.11 0.23 4 0 0 4 4 4 6 5 5 54.13 99.82 0.03 1 2 3 Whitelist LUSC-US 0.1 0.46 0 0 0.48 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 7 70019801 127573822 1 5 149 3 0 0 0 2 0.03 0.71 8 0 0 8 3 4 13 4 4 54.13 28.59 68.86 0 2 4 Whitelist LUSC-US 0.62 0.9 0 0 0.33 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 8 3356591 4146144 3 3 149 3 0 0 0 0 0.03 0 4 0 0 4 3 4 23 6 6 54.13 69.1 26.8 0 1 0 Whitelist LUSC-US 0.41 0 0 0 0.33 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 9 NA NA 0 0 149 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.12 NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 10 89518322 110971944 1 4 149 2 0 1 0 1 0.3 0.56 7 0 0 7 4 6 12 5 7 54.13 52.85 43.76 0 0 2 Whitelist LUSC-US 0.54 0.78 0 0 0.59 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 11 14272327 26635868 5 7 149 2 2 0 1 2 0.53 0 18 0 0 18 3 6 31 3 3 54.13 85.73 10.17 0 4 8 Whitelist LUSC-US 0.68 0 0 0 0.64 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 12 0.04 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 12 22945549 94815954 13 13 149 6 3 2 2 0 0.35 0.01 19 0 0 19 16 19 22 17 19 54.13 99.92 0 0 3 5 Whitelist LUSC-US 0.62 0.03 0 0 0.59 1 High confidence LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC After polyploidization 26 0.09 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 13 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 14 29880869 29952734 1 1 149 1 0 0 0 0 0.39 0.64 2 NA NA NA NA NA 5 3 3 54.13 98.17 0.92 0 2 4 Whitelist LUSC-US 0.62 0.85 NA NA 0.59 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 15 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 16 NA NA 0 0 149 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.69 NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 17 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 18 NA NA 0 0 149 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 19 NA NA 0 0 149 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.46 0 NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 20 14799253 14817124 1 1 149 1 0 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 54.13 99.03 0 0 5 NA Whitelist LUSC-US 0.62 0.93 NA NA 0.59 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 21 NA NA 0 0 149 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.29 NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 22 NA NA 0 0 149 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::3edf933a-be1a-46e8-bfb0-acdff30e64a0 X 125362017 125438085 1 1 149 1 0 0 0 0 0.39 0.26 2 0 NA NA NA NA 5 5 5 54.13 0.05 99.95 0 1 2 Whitelist LUSC-US 0.62 0.5 0 NA 0.59 1 No LUSC-US 3edf933a-be1a-46e8-bfb0-acdff30e64a0 LUSC 0.83 3.06 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:2 5 LUSC-US DO26461 TCGA-56-1622 3edf933a-be1a-46e8-bfb0-acdff30e64a0 male deceased C34.3 58 881 NA NA Included Lung-SCC LUSC US 1 28.98 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 1 171200244 171229545 1 1 76 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 33.76 0.01 99.99 0 1 2 Whitelist LUSC-US 0.62 1 0 NA 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 2 0.01 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 2 65460344 182013219 1 8 76 2 0 1 0 5 0.3 0 19 0 0 19 5 6 30 5 5 33.76 29.16 70.75 5 2 3 Whitelist LUSC-US 7 0.62 0 0 0 0.59 1 Linked to high confidence LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC With other complex events 11 0.07 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 3 141944458 142954015 1 1 76 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 33.76 96.83 0 0 3 4 Whitelist LUSC-US 0.62 0.63 NA NA 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 2 0.01 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 4 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 5 325600 155243848 1 9 76 0 3 0 0 6 0.03 0.03 5 0.09 0 5 3 3 5 3 3 33.76 73.58 23.74 1 5 1 Whitelist LUSC-US 2 0.68 0.1 0.09 0 0.33 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 12 0.08 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 6 28972064 28992676 1 1 76 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 8 6 6 33.76 78.83 17.99 0 1 2 Whitelist LUSC-US 0.62 1 NA NA 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 2 0.01 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 7 73026297 85512823 10 12 76 4 4 0 2 2 0.22 0 14 0 0 14 14 14 17 14 14 33.76 82.13 17.64 1 2 3 Whitelist LUSC-US 2 0.62 0 0 0 0.59 1 High confidence LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC Canonical without polyploidization 22 0.14 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 8 52617261 79809230 5 5 76 3 1 1 0 0 0.28 0.01 14 0 0 14 10 14 18 11 11 33.76 73.81 22.67 0 3 2 Whitelist LUSC-US 0.62 0.03 0 0 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 10 0.07 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 9 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 10 67380057 108028478 1 2 76 2 0 0 0 0 0.11 0.59 4 NA 0 4 4 4 5 5 5 33.76 0.53 99.3 0 1 2 Whitelist LUSC-US 0.54 0.81 NA 0 0.48 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 4 0.03 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 11 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 12 NA NA 0 0 76 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.65 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 13 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 14 NA NA 0 0 76 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 15 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 16 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 17 21094107 44349669 1 2 76 2 0 0 0 0 0.11 1 4 NA 0 4 0 4 5 3 5 33.76 49.92 45.38 0 1 0 Whitelist LUSC-US 0.54 1 NA 0 0.48 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 4 0.03 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 18 NA NA 0 0 76 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.9 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 19 NA NA 0 0 76 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.41 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 20 478300 59588477 1 4 76 1 0 0 0 3 0.39 0.01 2 0 0.01 NA NA NA NA NA NA 33.76 6.06 93.79 0 2 3 Whitelist LUSC-US 0.54 0.03 0 0.01 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 5 0.03 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 21 NA NA 0 0 76 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.82 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 22 22468078 28624815 1 3 76 0 0 1 0 2 0.39 0.06 3 NA 0 NA NA NA 4 4 4 33.76 100 0 0 1 3 Whitelist LUSC-US 0.87 0.19 NA 0 0.59 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 4 0.03 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::422a46b2-a67c-4a7e-923f-9b651ced96f8 X NA NA 0 0 76 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 NA NA NA 1 No LUSC-US 422a46b2-a67c-4a7e-923f-9b651ced96f8 LUSC 0.55 1.97 Lung-SCC NA 0 0 stopgain,17_7578188_A_C,CN:1 2 LUSC-US DO27208 TCGA-22-5492 422a46b2-a67c-4a7e-923f-9b651ced96f8 female deceased C34.1 73 506 NA NA Included Lung-SCC LUSC US 1 16.64 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 1 73239989 92463385 2 9 500 1 0 0 1 7 0.57 0.8 11 0 0 11 4 6 39 4 10 64.44 83.3 13.73 0 2 3 Whitelist LUSC-US 5 0.62 0.95 0 0 0.64 1 Linked to high confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 11 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 2 4435309 219331448 63 65 500 13 18 15 17 2 0.82 0 92 0 0 92 7 9 95 7 7 64.44 50.35 46.93 35 2 4 Whitelist LUSC-US 0.94 0 0 0 0.86 1 High confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 128 0.13 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 3 96334427 197597663 95 109 500 13 25 30 27 14 0.07 0 122 0 0 122 7 12 125 7 12 64.44 51.78 44.94 11 5 4 Whitelist LUSC-US 5 0.54 0 0 0 0.48 1 High confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 204 0.2 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 4 2009713 2093905 2 3 500 0 1 1 0 1 0.57 0 2 0 0 NA NA NA 13 9 9 64.44 99.47 0.52 0 3 4 Whitelist LUSC-US 8 0.87 0 0 0 0.64 1 Linked to low confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 5 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 5 932078 55824519 9 11 500 4 3 1 1 2 0.39 0 32 0 0 32 7 12 53 7 12 64.44 31.86 65.46 1 11 10 Whitelist LUSC-US 0.62 0.01 0 0 0.59 1 High confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 20 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 6 157237866 157427585 1 1 500 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 4 64.44 97.06 0.11 0 2 3 Whitelist LUSC-US 0.62 0 0 NA 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 7 114953114 146032540 10 10 500 0 3 3 4 0 0.31 0.77 26 0 0 26 4 6 41 5 7 64.44 89.54 10.24 0 5 6 Whitelist LUSC-US 0.62 0.93 0 0 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 20 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 8 30016639 108126673 13 31 500 8 9 4 5 5 0.45 0 82 0 0 82 5 7 123 5 8 64.44 79.37 20.36 9 9 11 Whitelist LUSC-US 0.7 0 0 0 0.64 1 Low confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 57 0.06 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 9 21846780 123901906 14 14 500 3 3 4 4 0 0.96 0 59 0 0 59 9 13 64 9 9 64.44 41.13 58.73 4 3 2 Whitelist LUSC-US 0.98 0 0 0 0.98 1 High confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 28 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 10 44557512 95329436 17 31 500 4 6 3 4 14 0.77 0 34 0 0 34 4 8 35 4 8 64.44 60.05 39.77 5 3 2 Whitelist LUSC-US 0.87 0.01 0 0 0.84 1 Low confidence LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC With other complex events 48 0.05 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 11 34593813 119060028 1 13 500 0 4 0 0 9 0.01 0.2 15 0 0 15 6 8 18 6 8 64.44 61.54 38.03 0 3 4 Whitelist LUSC-US 0.68 0.43 0 0 0.16 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 17 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 12 1731132 71691828 1 6 500 2 3 0 0 1 0.14 0.01 11 0 0 11 6 11 13 6 6 64.44 99.92 0 1 4 5 Whitelist LUSC-US 0.62 0.06 0 0 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 11 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 13 27395120 27688194 1 1 500 0 1 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 64.44 0.25 99.75 0 2 3 Whitelist LUSC-US 0.62 0 0 NA 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 14 36773168 37037301 1 1 500 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 4 64.44 96.29 0 0 4 5 Whitelist LUSC-US 0.62 0.01 0 NA 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 15 42051712 45878551 1 3 500 1 2 0 0 0 0.3 0 6 0 0 6 5 6 8 5 5 64.44 28.45 71.45 0 2 3 Whitelist LUSC-US 0.62 0.02 0 0 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 16 19228995 89518373 1 7 500 0 1 0 1 5 0.57 0.09 13 0 0 13 4 11 16 4 14 64.44 95.25 0 0 4 5 Whitelist LUSC-US 0.96 0.26 0 0 0.64 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 9 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 17 48522453 80002813 1 4 500 0 4 0 0 0 0.01 0.07 9 0 0 9 4 6 14 7 9 64.44 95.52 0 0 5 6 Whitelist LUSC-US 0.21 0.21 0 0 0.16 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 18 9562118 60038022 1 4 500 2 1 0 0 1 0.3 0.02 2 0 0 NA NA NA 5 5 5 64.44 99.99 0 0 3 4 Whitelist LUSC-US 0.54 0.07 0 0 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 19 42128703 42506951 3 3 500 0 1 1 1 0 0.8 0.26 5 0 0 5 3 3 9 4 4 64.44 51.24 41.09 0 4 5 Whitelist LUSC-US 0.87 0.5 0 0 0.84 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 20 30578923 62333718 1 5 500 0 2 0 0 3 0.11 0.09 5 0 0 5 3 5 5 3 3 64.44 98.93 0 1 4 3 Whitelist LUSC-US 0.68 0.24 0 0 0.48 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 21 NA NA 0 0 500 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.13 NA NA NA 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 22 20221224 20821730 1 1 500 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 10 4 4 64.44 88.89 0 0 9 11 Whitelist LUSC-US 0.62 0.34 NA NA 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::43abe847-4ba7-466e-8283-5d7b80b999a7 X 6613181 154980814 1 6 500 2 3 0 1 0 0.34 0 12 0 0 12 12 12 13 13 13 64.44 6.57 93.25 1 1 2 Whitelist LUSC-US 0.62 0 0 0 0.59 1 No LUSC-US 43abe847-4ba7-466e-8283-5d7b80b999a7 LUSC 0.69 3.74 Lung-SCC NA 12 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:3 5 LUSC-US DO27128 TCGA-66-2756 43abe847-4ba7-466e-8283-5d7b80b999a7 male alive C34.1 68 NA 30 NA Included Lung-SCC LUSC US 0 0.99 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 1 120911409 246543462 3 7 103 0 1 1 1 4 0.8 0.14 6 0 0 6 3 6 9 3 4 43.57 48.75 48.17 6 2 0 Whitelist LUSC-US 0.62 0.34 0 0 0.84 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 10 0.05 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 2 54467990 78652935 17 19 103 5 5 4 3 2 0.89 0 16 0 0 16 5 6 24 5 6 43.57 20.46 79.41 0 4 2 Whitelist LUSC-US 0.87 0 0 0 0.92 1 Low confidence LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC With other complex events 36 0.17 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 3 109100638 147123286 1 2 103 1 0 0 1 0 0.57 0.7 2 0 0 NA NA NA 9 4 4 43.57 99.85 0.01 0 1 6 Whitelist LUSC-US 0.68 0.89 0 0 0.64 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 4 19785917 19857480 1 1 103 0 1 0 0 0 0.39 0.33 1 0 NA NA NA NA 5 3 5 43.57 51.68 48.1 0 2 NA Whitelist LUSC-US 0.62 0.58 0 NA 0.59 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 5 NA NA 0 0 103 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.09 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 6 NA NA 0 0 103 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.26 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 7 NA NA 0 0 103 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.15 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 8 24315943 122822158 7 7 103 2 0 2 3 0 0.44 0 13 0 0 13 7 11 17 7 7 43.57 69.86 26.72 1 2 1 Whitelist LUSC-US 0.68 0 0 0 0.64 1 High confidence LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC With other complex events 14 0.07 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 9 NA NA 0 0 103 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.69 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 10 NA NA 0 0 103 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.59 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 11 794023 124812728 1 6 103 1 0 0 2 3 0.3 0.01 9 0 0 9 3 3 10 4 4 43.57 50.34 49.24 1 2 1 Whitelist LUSC-US 0.93 0.04 0 0 0.59 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 9 0.04 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 12 72414962 72960949 1 1 103 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 43.57 0 99.92 0 2 NA Whitelist LUSC-US 0.62 0.48 NA NA 0.59 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 13 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 14 NA NA 0 0 103 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.63 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 15 33800204 33826219 1 1 103 1 0 0 0 0 0.39 0.38 2 0 NA NA NA NA 4 4 4 43.57 4.8 79.79 0 1 2 Whitelist LUSC-US 0.62 0.63 0 NA 0.59 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 16 6214287 6225778 1 1 103 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 43.57 0.01 99.9 0 2 NA Whitelist LUSC-US 0.62 1 NA NA 0.59 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 17 NA NA 0 0 103 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 18 NA NA 0 0 103 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.61 0 NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 19 NA NA 0 0 103 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 20 NA NA 0 0 103 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.91 NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 21 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 22 24430019 42198543 1 2 103 2 0 0 0 0 0.11 0.35 2 NA 0 NA NA NA NA NA NA 43.57 4.99 71.23 0 1 2 Whitelist LUSC-US 0.54 0.6 NA 0 0.48 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::4ca13c92-84b4-4edf-842a-b20b7e713415 X 52875984 52906262 1 2 103 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 43.57 100 0 0 1 NA Whitelist LUSC-US 0.68 0.4 NA 0 0.64 1 No LUSC-US 4ca13c92-84b4-4edf-842a-b20b7e713415 LUSC 0.4 1.72 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 LUSC-US DO26492 TCGA-96-7545 4ca13c92-84b4-4edf-842a-b20b7e713415 male alive C34.3 73 NA 1324 NA Included Lung-SCC LUSC US 0 43.55 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 1 56860961 212340285 1 3 129 0 2 0 0 1 0.11 0.1 4 0 0 4 0 3 5 3 3 61.45 91.22 0 1 3 4 Whitelist LUSC-US 0.62 0.27 0 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 2 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 3 153383644 172458184 1 2 129 0 2 0 0 0 0.11 0.86 1 0 0 NA NA NA 5 0 0 61.45 49.19 50.77 0 8 NA Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 4 151883994 152064093 1 1 129 0 1 0 0 0 0.39 0.48 1 0 NA NA NA NA 5 0 0 61.45 8.27 89.13 0 2 NA Whitelist LUSC-US 0.62 0.72 0 NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 5 37365131 66939861 1 2 129 0 2 0 0 0 0.11 0.2 2 0 0 NA NA NA 4 3 3 61.45 25.47 71.86 0 2 8 Whitelist LUSC-US 0.54 0.42 0 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 6 134514230 134993023 2 2 129 0 2 0 0 0 0.11 0.85 3 0 0 NA NA NA 10 5 9 61.45 99.76 0 0 4 5 Whitelist LUSC-US 0.54 0.99 0 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 7 65404752 70125406 1 3 129 2 1 0 0 0 0.3 0.56 7 0 0 7 3 5 11 4 4 61.45 89.74 10.03 0 2 1 Whitelist LUSC-US 0.62 0.79 0 0 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 8 99694601 102479308 1 2 129 0 2 0 0 0 0.11 0.07 1 NA 0 NA NA NA NA NA NA 61.45 71.48 28.41 0 6 NA Whitelist LUSC-US 0.54 0.21 NA 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 9 NA NA 0 0 129 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist LUSC-US NA 0.96 NA NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 10 122710225 123311410 1 1 129 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 7 3 3 61.45 1.13 95.48 0 2 3 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 11 42188144 42203169 1 1 129 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 61.45 96.4 0 0 4 NA Whitelist LUSC-US 0.62 0.12 NA NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 12 91408380 91527115 1 1 129 0 0 1 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 61.45 99.92 0 0 4 NA Whitelist LUSC-US 0.62 0.54 0 NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 13 67293236 95703320 1 3 129 1 2 0 0 0 0.3 1 4 0 0 4 3 4 7 3 3 61.45 0.32 85.53 0 2 1 Whitelist LUSC-US 0.62 1 0 0 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 14 41795750 61058363 1 4 129 1 0 1 0 2 0.57 0.61 4 0 0 4 0 3 5 3 3 61.45 38.83 42.45 0 2 4 Whitelist LUSC-US 0.68 0.82 0 0 0.64 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 15 22925882 22955864 1 1 129 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 61.45 73.56 6.12 0 4 5 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 16 NA NA 0 0 129 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.51 NA NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 17 4579530 32487536 1 2 129 0 1 0 1 0 0.57 0.4 9 0 0 9 3 5 11 3 6 61.45 94.48 0 0 3 5 Whitelist LUSC-US 0.68 0.65 0 0 0.64 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 18 NA NA 0 0 129 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0 NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 19 23618909 23731397 2 2 129 0 0 0 2 0 0.11 0 3 0 0 NA NA NA 11 3 3 61.45 58.82 40.57 0 4 7 Whitelist LUSC-US 0.54 0.01 0 0 0.48 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 20 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 21 42901911 43211534 1 1 129 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 61.45 68.27 0 0 3 7 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 22 NA NA 0 0 129 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.42 0 NA NA 0 No LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::585e6487-b0a3-4828-8a06-46bee01dff74 X 1585455 33684999 45 45 129 9 13 11 12 0 0.85 0 41 0 0 41 4 5 54 5 5 61.45 96.55 0 2 8 1 Whitelist LUSC-US 0.92 0 0 0 0.89 0 Low confidence LUSC-US 585e6487-b0a3-4828-8a06-46bee01dff74 LUSC 0.64 3.46 Lung-SCC With other complex events 90 0.35 nonsynonymous_SNV,17_7578272_C_G,CN:3 4 LUSC-US DO27453 TCGA-60-2719 585e6487-b0a3-4828-8a06-46bee01dff74 female alive C34.9 83 NA 932 NA Included Lung-SCC LUSC US 0 30.66 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 1 156943896 209633990 1 3 130 0 2 0 0 1 0.11 0.05 5 0 0 5 3 4 13 4 4 70.84 100 0 1 4 6 Whitelist LUSC-US 0.62 0.16 0 0 0.48 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 2 220739 11339828 2 2 130 0 0 1 1 0 0.57 0.64 1 0 0.05 NA NA NA 9 3 4 70.84 97.19 0.11 0 3 NA Whitelist LUSC-US 0.68 0.85 0 0.05 0.64 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 3 181546045 189173080 13 13 130 1 5 5 2 0 0.27 0 18 0 0 18 4 8 25 4 4 70.84 52.49 44.36 4 19 12 Whitelist LUSC-US 0.62 0 0 0 0.59 0 Low confidence LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC With other complex events 26 0.1 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 4 NA NA 0 0 130 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA 11 3 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.99 0 NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 5 22631590 104669717 1 2 130 1 0 1 0 0 0.57 1 2 0 0 NA NA NA 13 4 6 70.84 64.86 35.01 2 1 3 Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 6 36602832 87434253 5 5 130 0 3 1 1 0 0.28 0.06 4 0 0 4 3 4 10 6 6 70.84 51.25 48.49 0 3 2 Whitelist LUSC-US 0.62 0.19 0 0 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 10 0.04 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 7 5518251 94379694 1 5 130 0 1 1 2 1 0.57 0.07 5 0 0 5 3 5 6 3 3 70.84 96.31 3.45 1 4 2 Whitelist LUSC-US 0.68 0.22 0 0 0.64 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 9 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 8 140780942 141169179 1 1 130 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 70.84 99.63 0.27 2 2 4 Whitelist LUSC-US 0.62 0.21 NA NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 9 13834378 123232922 1 4 130 1 3 0 0 0 0.11 0.36 18 0 0 18 6 13 20 6 6 70.84 75.33 21.59 2 2 4 Whitelist LUSC-US 0.54 0.61 0 0 0.48 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 10 NA NA 0 0 130 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.12 NA NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 11 29395297 67591491 4 5 130 0 2 2 0 1 0.26 0 9 0 0 9 3 5 13 5 5 70.84 44.76 51.17 0 4 6 Whitelist LUSC-US 0.68 0.02 0 0 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 9 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 12 125412483 125424375 1 1 130 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 70.84 99.92 0 0 3 NA Whitelist LUSC-US 0.62 0.26 NA NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 13 73736991 74002049 1 1 130 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 70.84 0.23 99.77 0 2 3 Whitelist LUSC-US 0.62 0.34 NA NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 14 NA NA 0 0 130 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 15 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 16 48383572 48496738 1 1 130 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 70.84 99.91 0 0 4 5 Whitelist LUSC-US 0.62 0.94 NA NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 17 18108890 41996624 18 21 130 6 2 2 8 3 0.11 0 33 0 0 33 6 12 39 6 8 70.84 72.7 22.85 3 4 5 Whitelist LUSC-US 0.62 0 0 0 0.48 0 Low confidence LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC With other complex events 39 0.15 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 18 29555178 34385448 1 1 130 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 70.84 99.96 0 0 4 6 Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 19 55734271 55956704 1 2 130 1 1 0 0 0 0.57 0.75 4 0 0 4 3 4 6 4 4 70.84 99.83 0 0 4 3 Whitelist LUSC-US 0.68 0.91 0 0 0.64 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 20 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 21 22638037 23732348 1 2 130 0 2 0 0 0 0.11 0.68 3 NA 0 NA NA NA NA NA NA 70.84 77.35 0 1 3 4 Whitelist LUSC-US 0.54 0.88 NA 0 0.48 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 22 19585690 19596830 1 1 130 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 70.84 100 0 0 5 NA Whitelist LUSC-US 0.62 0.08 0 NA 0.59 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::6fd72426-f6c8-47ca-a500-d5d3600b9b15 X NA NA 0 0 130 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.21 NA NA NA 0 No LUSC-US 6fd72426-f6c8-47ca-a500-d5d3600b9b15 LUSC 0.8 3.37 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 3 LUSC-US DO26798 TCGA-60-2722 6fd72426-f6c8-47ca-a500-d5d3600b9b15 male alive C34.1 66 NA 733 NA Included Lung-SCC LUSC US 0 24.11 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 1 180118289 227092684 3 7 349 1 0 2 0 4 0.3 0.76 4 0 0 4 3 4 28 6 8 50.58 57.76 39.27 0 3 2 Whitelist LUSC-US 10 0.62 0.93 0 0 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 10 0.01 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 2 16626479 125491838 70 110 349 21 20 11 18 40 0.32 0 97 0 0 97 8 14 101 8 8 50.58 97.07 0.24 5 4 5 Whitelist LUSC-US 18_3 0.76 0 0 0 0.59 1 High confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC With other complex events 180 0.26 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 3 30056583 192447182 1 28 349 3 2 2 0 21 0.44 0.06 11 0 0 11 6 9 12 6 6 50.58 52.27 44.19 1 5 4 Whitelist LUSC-US 10_2 0.98 0.18 0 0 0.64 1 Linked to high confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC With other complex events 35 0.05 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 4 59343654 113670691 5 7 349 1 1 2 1 2 0.9 0.09 17 0 0 17 7 8 23 7 9 50.58 52.42 45.22 6 3 4 Whitelist LUSC-US 0.96 0.24 0 0 0.92 1 High confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC With other complex events 12 0.02 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 5 7470337 7723274 1 1 349 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 15 4 10 50.58 26.03 71.3 0 5 6 Whitelist LUSC-US 0.62 0 0 NA 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 2 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 6 64292341 162408401 1 7 349 4 3 0 0 0 0.06 0 12 0 0 12 5 7 13 5 7 50.58 96.58 0.01 0 3 1 Whitelist LUSC-US 0.54 0 0 0 0.48 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 14 0.02 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 7 12149298 158873626 53 80 349 14 12 14 13 27 0.98 0 100 0 0 100 26 26 103 29 29 50.58 92.19 5.18 6 3 4 Whitelist LUSC-US 18 0.7 0 0 0 0.99 1 High confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC With other complex events 133 0.19 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 8 76836282 82132951 4 7 349 2 2 0 0 3 0.26 0 4 0 0 4 3 4 38 7 12 50.58 76.98 23.02 28 5 4 Whitelist LUSC-US 0.77 0.02 0 0 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 11 0.02 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 9 NA NA 0 0 349 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0 NA NA NA 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 0 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 10 89028540 98045877 6 19 349 1 1 2 2 13 0.88 0 8 0 0 8 5 7 19 7 9 50.58 44.41 55.43 0 1 2 Whitelist LUSC-US 11 0.87 0 0 0 0.91 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 25 0.04 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 11 303986 38787003 1 6 349 2 1 0 0 3 0.3 0.02 6 0 0 6 5 6 7 5 5 50.58 3.31 96.13 0 2 3 Whitelist LUSC-US 10 0.68 0.06 0 0 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 9 0.01 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 12 861995 1025507 1 1 349 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA 10 6 6 50.58 72.96 26.95 0 5 7 Whitelist LUSC-US 0.62 0.11 0 NA 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 2 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 13 NA NA 0 0 349 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0 NA NA NA 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 0 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 14 26895115 27955323 2 2 349 1 0 0 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 50.58 0.04 99.05 0 2 NA Whitelist LUSC-US 0.68 0.04 0 0 0.64 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 4 0.01 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 15 26582435 81695990 2 2 349 0 0 1 1 0 0.57 0.01 4 NA 0 4 4 4 6 5 6 50.58 41.38 53.74 0 2 3 Whitelist LUSC-US 0.68 0.04 NA 0 0.64 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 4 0.01 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 16 18964017 18975906 1 1 349 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 50.58 99.9 0 0 3 5 Whitelist LUSC-US 0.62 0.01 NA NA 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 2 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 17 25273878 70520743 1 22 349 2 0 0 1 19 0.3 0 12 0 0 12 4 8 15 4 11 50.58 58.63 41.35 0 4 2 Whitelist LUSC-US 0.94 0 0 0 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 25 0.04 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 18 5099437 27048293 2 2 349 0 0 1 1 0 0.57 0.04 4 0 0 4 4 4 22 7 9 50.58 54.21 45.72 0 2 4 Whitelist LUSC-US 0.68 0.15 0 0 0.64 1 Linked to high confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC Before polyploidization 4 0.01 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 19 58397897 58522885 1 1 349 1 0 0 0 0 0.39 0.34 1 0 NA NA NA NA 8 4 5 50.58 23.21 68.23 0 1 NA Whitelist LUSC-US 0.62 0.59 0 NA 0.59 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 2 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 20 NA NA 0 0 349 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 0 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 21 NA NA 0 0 349 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.7 NA NA NA 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 0 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 22 NA NA 0 0 349 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 NA NA NA 1 No LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC NA 0 0 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7b982d5e-3a7d-40ac-bd25-6044c62879b6 X 1013157 124031492 1 12 349 0 0 1 0 11 0.39 0.33 2 0 0 NA NA NA NA NA NA 50.58 0.02 99.98 0 1 2 Whitelist LUSC-US 2 0.62 0.58 0 0 0.59 1 Linked to high confidence LUSC-US 7b982d5e-3a7d-40ac-bd25-6044c62879b6 LUSC 0.45 2.92 Lung-SCC With other complex events 13 0.02 stopgain,17_7579377_A_G,CN:3 5 LUSC-US DO26993 TCGA-68-8250 7b982d5e-3a7d-40ac-bd25-6044c62879b6 male alive C34.1 66 NA 244 NA Included Lung-SCC LUSC US 0 8.03 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 1 36480110 235261381 1 7 385 1 4 0 0 2 0.04 0 11 0 0 11 3 7 15 3 4 42.32 11.14 88.86 2 2 4 Whitelist LUSC-US 0.62 0 0 0 0.36 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 2 79670598 142912803 39 47 385 12 8 8 11 8 0.73 0 26 0 0 26 8 9 39 8 8 42.32 99.79 0.12 3 3 4 Whitelist LUSC-US 20 0.96 0 0 0 0.81 1 High confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 86 0.11 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 3 18318665 172882633 1 20 385 4 3 3 2 8 0.88 0.76 29 0 0 29 4 7 31 4 5 42.32 63.17 33.48 12 3 2 Whitelist LUSC-US 16 0.86 0.93 0 0 0.91 1 Linked to high confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 32 0.04 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 4 1204893 1307633 1 1 385 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 42.32 0.05 99.74 0 1 2 Whitelist LUSC-US 0.62 0 NA NA 0.59 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 5 1687513 37366455 7 7 385 0 3 2 2 0 0.44 0.01 15 0 0 15 4 4 35 6 6 42.32 49.28 48.06 2 8 7 Whitelist LUSC-US 0.68 0.05 0 0 0.64 1 Low confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 14 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 6 43327281 43576019 4 4 385 1 2 1 0 0 0.57 0.09 4 0 0 4 0 4 18 4 4 42.32 34 63.14 1 3 1 Whitelist LUSC-US 0.68 0.24 0 0 0.64 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 7 6390675 129703816 1 9 385 0 5 0 0 4 0 0.09 10 0 0 10 8 10 14 9 10 42.32 41.94 55.36 1 3 2 Whitelist LUSC-US 14 0.41 0.25 0 0 0.07 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 8 141676252 141914554 2 2 385 2 0 0 0 0 0.11 0.35 4 0 0 4 3 4 22 7 9 42.32 99.54 0.01 1 5 4 Whitelist LUSC-US 0.54 0.61 0 0 0.48 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 9 33345731 33489612 7 7 385 1 4 1 1 0 0.28 0.43 9 0 0 9 3 4 15 4 5 42.32 1.51 97.79 0 3 4 Whitelist LUSC-US 0.62 0.68 0 0 0.59 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 10 360615 99579628 1 6 385 2 3 0 1 0 0.34 0.04 15 0 0 15 5 7 18 5 7 42.32 98.94 0.89 0 3 4 Whitelist LUSC-US 0.62 0.13 0 0 0.59 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 11 131184266 131336641 2 2 385 0 0 1 1 0 0.57 0.05 4 0 0 4 3 4 10 4 4 42.32 72.72 26.85 1 4 1 Whitelist LUSC-US 0.68 0.17 0 0 0.64 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 12 42487054 124021033 1 8 385 1 5 0 0 2 0.01 0.05 10 0 0 10 6 9 15 6 9 42.32 42.32 57.59 1 3 2 Whitelist LUSC-US 0.21 0.17 0 0 0.19 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 13 23961338 24564615 1 1 385 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 42.32 0.52 96.7 0 2 3 Whitelist LUSC-US 0.62 0 NA NA 0.59 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 14 46450174 50623927 2 4 385 0 1 1 2 0 0.57 0.06 6 0 0 6 4 6 16 7 7 42.32 3.52 80.57 0 2 1 Whitelist LUSC-US 0.68 0.18 0 0 0.64 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 15 36314614 96521680 1 10 385 2 1 0 1 6 0.57 0.64 8 0 0 8 3 5 10 4 6 42.32 32.04 67.86 1 3 2 Whitelist LUSC-US 20_5 0.62 0.85 0 0 0.64 1 Linked to low confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 14 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 16 1242659 24867894 7 11 385 1 1 2 3 4 0.67 0 19 0 0 19 11 11 32 11 11 42.32 19.32 79.73 2 2 1 Whitelist LUSC-US 0.62 0.01 0 0 0.74 1 High confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 18 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 17 70449493 70555908 2 2 385 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 29 6 8 42.32 38 62 1 2 3 Whitelist LUSC-US 0.54 0 0 0 0.48 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 18 3889958 60926976 18 24 385 3 3 6 6 6 0.57 0 32 0 0 32 7 12 33 7 8 42.32 27.6 67.46 12 2 3 Whitelist LUSC-US 0.68 0 0 0 0.64 1 High confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC With other complex events 42 0.05 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 19 43858289 44067791 2 16 385 0 0 1 1 14 0.57 0 12 0 0 12 4 5 52 5 5 42.32 55.62 35.71 1 5 8 Whitelist LUSC-US 20 0.62 0 0 0 0.64 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 18 0.02 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 20 49249923 49538224 2 19 385 0 0 2 0 17 0.11 0 7 0 0 7 6 7 34 7 9 42.32 89.74 2.55 3 1 4 Whitelist LUSC-US 0.72 0 0 0 0.48 1 Linked to high confidence LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC Before polyploidization 21 0.03 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 21 34436481 34983987 1 1 385 0 1 0 0 0 0.39 0.81 2 0 NA NA NA NA 5 5 5 42.32 3.46 73.89 0 2 3 Whitelist LUSC-US 0.62 0.96 0 NA 0.59 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 22 38766956 45956720 2 19 385 1 1 0 0 17 0.57 0 7 0 0 7 5 7 23 8 8 42.32 98.16 0.6 2 3 4 Whitelist LUSC-US 0.62 0 0 0 0.64 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 21 0.03 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::7d905f8f-3967-4ea8-96c8-17b1b03fbec3 X 8526352 10620940 1 2 385 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 7 7 7 42.32 21 75.84 0 1 2 Whitelist LUSC-US 0.54 0 NA 0 0.48 1 No LUSC-US 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 LUSC 0.57 2.6 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578280_A_G,CN:2 2 LUSC-US DO26434 TCGA-43-5670 7d905f8f-3967-4ea8-96c8-17b1b03fbec3 male alive C34.3 70 NA 549 NA Included Lung-SCC LUSC US 0 18.06 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 1 NA NA 0 0 72 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.22 0 NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 2 242720316 242741803 2 2 72 2 0 0 0 0 0.11 0.39 3 0 0 NA NA NA 9 9 9 36.66 1.81 95.5 0 2 1 Whitelist LUSC-US 0.54 0.64 0 0 0.48 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 4 0.03 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 3 88162812 175562429 1 3 72 0 2 0 1 0 0.3 0.64 6 0 0 6 5 6 8 6 6 36.66 40.95 58.91 0 2 3 Whitelist LUSC-US 0.62 0.85 0 0 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 6 0.04 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 4 79972908 132819666 1 4 72 1 1 0 0 2 0.57 0.81 6 0 0 6 3 4 10 4 7 36.66 24.87 72.65 3 1 2 Whitelist LUSC-US 9 0.62 0.96 0 0 0.64 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 6 0.04 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 5 2401167 27883995 1 1 72 0 0 1 0 0 0.39 0.46 5 0.07 0.03 5 0 3 9 4 5 36.66 25.47 71.85 1 1 3 Whitelist LUSC-US 0.62 0.7 0.07 0.03 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 6 NA NA 0 0 72 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.58 NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 7 114747607 114760570 1 1 72 0 0 0 1 0 0.39 0.59 1 0 NA NA NA NA NA NA NA 36.66 41.45 58.51 2 3 NA Whitelist LUSC-US 0.62 0.81 0 NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 8 73182944 76851174 1 3 72 0 0 1 1 1 0.57 0.18 5 0 0 5 3 5 12 4 11 36.66 78.4 21.49 0 3 1 Whitelist LUSC-US 0.87 0.4 0 0 0.64 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 5 0.03 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 9 120537735 139051609 2 2 72 0 1 0 1 0 0.57 0 6 0 0 6 6 6 15 9 9 36.66 19.98 79.86 6 1 2 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 4 0.03 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 10 43184106 43216189 1 1 72 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 36.66 0.02 95.84 0 1 2 Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 11 67784399 67801822 1 1 72 0 0 0 1 0 0.39 0.05 2 0 NA NA NA NA 13 3 4 36.66 4.2 95.66 0 5 7 Whitelist LUSC-US 0.62 0.16 0 NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 12 99236664 122308584 1 2 72 1 1 0 0 0 0.57 0.08 4 0 0 4 3 4 10 5 5 36.66 24.93 74.99 0 2 1 Whitelist LUSC-US 0.68 0.24 0 0 0.64 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 4 0.03 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 13 94786780 94811852 1 1 72 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 36.66 81.38 18.62 0 1 NA Whitelist LUSC-US 0.62 0.76 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 14 97969622 97981036 1 1 72 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 36.66 0 97.08 0 2 NA Whitelist LUSC-US 0.62 0.91 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 15 34399040 49525440 1 1 72 1 0 0 0 0 0.39 1 2 NA 0 NA NA NA 4 3 4 36.66 14.75 80.47 0 1 2 Whitelist LUSC-US 0.62 1 NA 0 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 16 NA NA 0 0 72 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.69 NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 17 74074336 74090319 1 1 72 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA 4 3 3 36.66 100 0 0 3 NA Whitelist LUSC-US 0.62 0.69 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 18 9072934 9111942 1 1 72 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 6 6 36.66 75.14 20.21 0 1 2 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 19 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 20 NA NA 0 0 72 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.87 NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da 22 29127726 29389047 1 1 72 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA 5 5 5 36.66 93.03 6.97 0 1 2 Whitelist LUSC-US 0.62 0.44 NA NA 0.59 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::81b7cbc1-c037-426f-95b0-d729a30697da X NA NA 0 0 72 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.51 NA NA NA 0 No LUSC-US 81b7cbc1-c037-426f-95b0-d729a30697da LUSC 0.56 1.85 Lung-SCC NA 0 0 NA 2 LUSC-US DO27067 TCGA-52-7812 81b7cbc1-c037-426f-95b0-d729a30697da male deceased C34.9 68 835 NA NA Included Lung-SCC LUSC US 1 27.47 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 1 15427220 247773092 1 17 168 13 4 0 0 0 0 0.11 29 0 0 29 17 29 29 17 17 44.83 2.36 97.64 1 2 1 Whitelist LUSC-US 0 0.29 0 0 0 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 34 0.1 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 2 9286806 241128872 1 9 168 6 0 0 0 3 0 0.89 21 0 0 21 7 21 23 7 7 44.83 44.05 52.99 6 2 3 Whitelist LUSC-US 0.41 1 0 0 0.03 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 15 0.04 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 3 143958377 144279950 3 3 168 1 0 1 1 0 0.8 0.03 4 0 0 4 4 4 24 8 8 44.83 59.76 37.09 2 4 5 Whitelist LUSC-US 0.87 0.12 0 0 0.84 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 4 36953201 169925742 1 6 168 5 1 0 0 0 0.01 0.22 13 0 0 13 8 13 16 8 8 44.83 12.34 87.43 0 1 2 Whitelist LUSC-US 0.25 0.45 0 0 0.19 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 12 0.04 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 5 39731493 124129974 1 4 168 2 1 1 0 0 0.57 0.08 6 0 0 6 5 6 8 5 5 44.83 97.32 0 1 1 0 Whitelist LUSC-US 0.68 0.23 0 0 0.64 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 8 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 6 15454998 160216667 1 10 168 6 3 0 0 1 0.01 0.33 19 0 0 19 5 15 21 5 7 44.83 28.4 68.68 0 2 1 Whitelist LUSC-US 0.18 0.58 0 0 0.21 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 19 0.06 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 7 6601946 151295994 2 4 168 0 1 1 2 0 0.57 0.3 11 0 0 11 5 7 13 7 7 44.83 0.56 99.21 0 2 1 Whitelist LUSC-US 0.68 0.55 0 0 0.64 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 8 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 8 38120259 135707606 1 5 168 3 0 1 0 1 0.11 0.6 8 0 0 8 4 6 9 4 4 44.83 99.82 0.17 0 2 3 Whitelist LUSC-US 0.62 0.81 0 0 0.48 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 9 0.03 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 9 4270798 4328841 1 1 168 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA 4 4 4 44.83 95.74 3.59 0 1 NA Whitelist LUSC-US 0.62 0.46 NA NA 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 10 35044684 50936946 1 3 168 2 0 0 0 1 0.11 0.46 2 0 0 NA NA NA NA NA NA 44.83 61.64 38.19 0 1 2 Whitelist LUSC-US 0.62 0.7 0 0 0.48 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 5 0.01 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 11 7921981 102129873 1 7 168 4 1 0 1 1 0.11 0.58 15 0 0 15 4 11 16 4 6 44.83 78.15 21.29 7 2 3 Whitelist LUSC-US 0.62 0.81 0 0 0.48 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 13 0.04 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 12 31240615 127592992 1 7 168 4 2 0 0 1 0.06 1 10 0 0 10 6 6 11 7 7 44.83 0.9 99.02 1 2 1 Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 13 0.04 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 13 35212779 91256720 1 3 168 3 0 0 0 0 0.03 0.67 2 0 0 NA NA NA NA NA NA 44.83 0.24 99.76 0 1 2 Whitelist LUSC-US 0.41 0.87 0 0 0.33 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 14 51144534 107005733 1 3 168 1 2 0 0 0 0.3 0.82 5 0 0 5 4 5 8 6 7 44.83 70.51 26.38 0 1 2 Whitelist LUSC-US 0.62 0.96 0 0 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 15 39608718 99251205 1 4 168 2 2 0 0 0 0.26 0.81 6 0 0 6 3 6 6 3 3 44.83 25.77 74.23 0 2 3 Whitelist LUSC-US 0.62 0.96 0 0 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 8 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 16 6425259 34825572 1 4 168 2 2 0 0 0 0.26 0.47 8 0 0 8 3 7 9 3 3 44.83 57.67 37.8 2 2 1 Whitelist LUSC-US 0.62 0.71 0 0 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 8 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 17 45942102 72433527 1 2 168 0 1 0 0 1 0.39 1 3 0 NA NA NA NA 4 3 3 44.83 78.75 21.24 0 2 3 Whitelist LUSC-US 0.54 1 0 NA 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 3 0.01 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 18 14327448 77250311 1 4 168 2 1 1 0 0 0.57 0.23 3 0 0 NA NA NA 7 3 5 44.83 13.8 85.11 1 1 2 Whitelist LUSC-US 0.68 0.46 0 0 0.64 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 8 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 19 9824586 52806509 1 10 168 4 1 1 0 4 0.11 0 8 0 0 8 4 6 9 4 4 44.83 42.8 57.03 0 1 2 Whitelist LUSC-US 3 0.62 0 0 0 0.48 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 16 0.05 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 20 12914110 30748504 1 3 168 2 1 0 0 0 0.3 0.79 2 0 0 NA NA NA NA NA NA 44.83 0.1 98.93 1 1 2 Whitelist LUSC-US 0.62 0.94 0 0 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 21 39799948 39814110 1 1 168 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 44.83 0 77.35 0 2 NA Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d 22 NA NA 0 0 168 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.9 NA NA NA 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 0 0 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::87ac0ad4-8c9d-409e-9a86-1d201d01769d X 40246909 42055587 3 3 168 1 2 0 0 0 0.3 0.86 3 0 0 NA NA NA NA NA NA 44.83 99.5 0.16 0 1 2 Whitelist LUSC-US 0.62 0.99 0 0 0.59 0 No LUSC-US 87ac0ad4-8c9d-409e-9a86-1d201d01769d LUSC 0.55 1.92 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO27279 TCGA-66-2789 87ac0ad4-8c9d-409e-9a86-1d201d01769d male deceased C34.3 73 123 NA NA Included Lung-SCC LUSC US 1 4.05 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 1 144884754 241461103 2 3 261 0 1 0 1 1 0.57 0.49 11 0 0 11 3 4 21 4 4 51.11 58.62 38.4 14 4 6 Whitelist LUSC-US 0.62 0.74 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 2 141421603 141711831 2 2 261 2 0 0 0 0 0.11 1 4 0 0 4 3 4 34 7 9 51.11 84.43 15.46 0 2 1 Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 3 90291254 183825857 15 24 261 4 7 2 2 9 0.22 0 30 0 0 30 3 9 44 6 8 51.11 52.27 44.57 3 4 8 Whitelist LUSC-US 19_20 0.62 0 0 0 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 39 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 4 21037269 21345412 2 2 261 2 0 0 0 0 0.11 0.06 4 0 0 4 3 4 9 6 6 51.11 0.49 99.49 0 1 0 Whitelist LUSC-US 0.54 0.19 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 5 59248232 59314016 2 2 261 0 2 0 0 0 0.11 0.45 3 0 0 NA NA NA 9 5 9 51.11 25.75 71.57 1 1 2 Whitelist LUSC-US 0.54 0.69 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 6 31102185 31119909 2 2 261 0 0 2 0 0 0.11 0.12 2 0 0 NA NA NA 22 3 7 51.11 29.22 70.63 0 1 7 Whitelist LUSC-US 0.54 0.3 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 7 69763377 69877591 2 2 261 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 23 7 7 51.11 68.39 28.89 0 3 2 Whitelist LUSC-US 0.54 0.05 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 8 3269213 4101417 4 4 261 4 0 0 0 0 0.01 0.57 4 0 0 4 0 3 17 5 5 51.11 43.39 56.61 0 2 0 Whitelist LUSC-US 0.21 0.8 0 0 0.16 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 9 5449709 36764176 1 4 261 0 2 0 1 1 0.3 0.05 9 0 0 9 4 4 12 4 4 51.11 97.45 0 0 3 15 Whitelist LUSC-US 0.68 0.17 0 0 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 10 54775057 65072347 2 2 261 0 0 1 1 0 0.57 0.1 4 0 0 4 3 4 21 5 12 51.11 16.92 82.9 0 2 3 Whitelist LUSC-US 0.68 0.27 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 11 13359355 131879989 1 7 261 1 4 1 0 1 0.11 0.56 14 0 0 14 4 5 14 4 5 51.11 42.81 53.72 5 2 3 Whitelist LUSC-US 0.62 0.78 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 12 14525645 88585874 1 11 261 0 2 1 0 8 0.3 0.38 13 0 0 13 5 7 13 5 5 51.11 85.26 14.65 2 4 5 Whitelist LUSC-US 0.98 0.63 0 0 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 14 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 13 96743596 96764849 1 1 261 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 51.11 22.35 77.65 2 3 NA Whitelist LUSC-US 0.62 0.05 NA NA 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 14 87025881 94254840 2 2 261 0 0 1 1 0 0.57 0.86 4 0 0 4 4 4 7 7 7 51.11 2.45 96.64 1 2 3 Whitelist LUSC-US 0.68 0.99 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 15 86349446 86386266 1 2 261 0 0 1 1 0 0.57 0.13 2 NA 0 NA NA NA 8 6 6 51.11 95.14 0 0 3 4 Whitelist LUSC-US 0.68 0.32 NA 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 16 1820140 78690760 1 6 261 1 2 0 1 2 0.57 0.44 9 0 0 9 4 6 10 4 4 51.11 73.04 26.87 0 3 2 Whitelist LUSC-US 0.93 0.69 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 17 57909534 57952873 2 2 261 0 0 1 1 0 0.57 0.44 1 0 0 NA NA NA 7 3 3 51.11 99.93 0.07 1 4 NA Whitelist LUSC-US 0.68 0.69 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 18 37015948 46011666 1 3 261 1 1 0 1 0 0.8 0.7 4 0 0 4 0 3 7 3 5 51.11 99.73 0 0 3 4 Whitelist LUSC-US 0.87 0.89 0 0 0.84 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 19 4156034 56588809 1 14 261 2 2 0 1 9 0.53 0 23 0 0 23 5 8 27 5 8 51.11 79.66 13.06 2 3 4 Whitelist LUSC-US 0.62 0 0 0 0.64 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 19 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 20 44576084 48486151 1 2 261 0 2 0 0 0 0.11 0.67 4 0 0 4 4 4 5 5 5 51.11 99.01 0 1 4 5 Whitelist LUSC-US 0.54 0.87 0 0 0.48 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 21 NA NA 0 0 261 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 22 33529377 33562725 1 1 261 0 1 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 51.11 100 0 0 3 NA Whitelist LUSC-US 0.62 0.93 NA NA 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::8e6020a1-68df-4d57-ad4e-33acc0861fb3 X 10816984 137991477 1 5 261 2 3 0 0 0 0.14 0.09 10 0 0 10 3 10 11 3 3 51.11 0.29 99.71 1 2 3 Whitelist LUSC-US 0.62 0.25 0 0 0.59 0 No LUSC-US 8e6020a1-68df-4d57-ad4e-33acc0861fb3 LUSC 0.58 2.71 Lung-SCC NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:4 3 LUSC-US DO26719 TCGA-85-8277 8e6020a1-68df-4d57-ad4e-33acc0861fb3 male alive C34.1 70 NA 11 NA Included Lung-SCC LUSC US 0 0.36 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 1 48566592 49128717 2 2 187 0 1 1 0 0 0.57 0.22 2 0 0 NA NA NA 37 10 11 62.18 81.77 18.23 3 4 5 Whitelist LUSC-US 0.68 0.46 0 0 0.64 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 2 136784508 201342357 2 9 187 2 0 0 0 7 0.11 0.01 11 0 0 11 11 11 25 14 15 62.18 97.03 0 23 3 4 Whitelist LUSC-US 0.68 0.03 0 0 0.48 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 11 0.03 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 3 116051342 116071708 1 1 187 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 6 3 3 62.18 52.5 44.35 0 5 6 Whitelist LUSC-US 0.62 0.03 0 NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 4 43364661 73902886 6 12 187 0 0 3 3 6 0.11 0 18 0 0 18 4 5 25 5 7 62.18 35.04 62.3 1 4 6 Whitelist LUSC-US 0.68 0.01 0 0 0.48 0 Low confidence LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC With other complex events 18 0.05 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 5 NA NA 0 0 187 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.06 0 NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 6 119856010 138873659 1 2 187 1 1 0 0 0 0.57 0.12 2 0 0 NA NA NA 6 4 6 62.18 96.4 0.75 11 3 4 Whitelist LUSC-US 0.68 0.31 0 0 0.64 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 7 67945786 122441992 10 10 187 4 2 3 1 0 0.57 0 15 0 0 15 6 12 44 6 9 62.18 84.91 12.12 3 5 6 Whitelist LUSC-US 0.68 0 0 0 0.64 0 Low confidence LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC With other complex events 20 0.05 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 8 90242040 90275184 3 3 187 3 0 0 0 0 0.03 1 2 0 0 NA NA NA 10 4 5 62.18 70.76 25.81 0 2 5 Whitelist LUSC-US 0.41 1 0 0 0.33 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 9 118903902 118918742 1 1 187 0 1 0 0 0 0.39 0.57 2 0 NA NA NA NA 5 3 3 62.18 4.61 94.72 0 2 3 Whitelist LUSC-US 0.62 0.79 0 NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 10 43732426 43780400 1 1 187 1 0 0 0 0 0.39 0.86 1 0 NA NA NA NA 7 4 4 62.18 72.05 24.53 0 3 NA Whitelist LUSC-US 7 0.62 0.99 0 NA 0.59 0 Linked to low confidence LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC With other complex events 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 11 13432003 36068211 11 11 187 4 4 0 3 0 0.27 0 3 0 0 NA NA NA 6 6 6 62.18 52.4 47.17 3 3 2 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 22 0.06 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 12 44726067 44743654 1 1 187 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA 4 4 4 62.18 95.68 0 0 3 NA Whitelist LUSC-US 0.62 0.17 NA NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 13 19537604 19555434 1 1 187 0 0 1 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 62.18 14.15 83.04 0 2 NA Whitelist LUSC-US 0.62 0.09 NA NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 14 68657542 68696129 1 1 187 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 5 3 3 62.18 78.29 18.01 9 3 4 Whitelist LUSC-US 0.62 0.54 NA NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 15 NA NA 0 0 187 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.74 NA NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 16 64288601 64307457 1 1 187 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 62.18 51.35 48.32 2 2 NA Whitelist LUSC-US 0.62 0.49 NA NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 17 67733899 73468129 3 8 187 0 1 1 1 5 0.8 0 10 0 0 10 0 3 31 7 10 62.18 69.9 24.83 0 3 4 Whitelist LUSC-US 2 0.62 0 0 0 0.84 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 11 0.03 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 18 NA NA 0 0 187 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0 NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 19 20814306 47117335 2 2 187 1 0 0 1 0 0.57 0 5 0 0 5 3 4 15 3 3 62.18 82.99 9.73 9 5 1 Whitelist LUSC-US 0.68 0.01 0 0 0.64 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 20 NA NA 0 0 187 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 12 3 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0 0 NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 21 NA NA 0 0 187 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.91 NA NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd 22 NA NA 0 0 187 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9293e197-e38a-4e19-a7d0-1b45d1ad48bd X 14683246 14694449 1 1 187 1 0 0 0 0 0.39 0.61 2 0 NA NA NA NA 8 4 8 62.18 20.83 79.17 0 1 2 Whitelist LUSC-US 0.62 0.83 0 NA 0.59 0 No LUSC-US 9293e197-e38a-4e19-a7d0-1b45d1ad48bd LUSC 0.53 3.3 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:3 3 LUSC-US DO26445 TCGA-43-3920 9293e197-e38a-4e19-a7d0-1b45d1ad48bd male alive C34.1 71 NA 268 NA Included Lung-SCC LUSC US 0 8.82 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 1 209520957 209589216 2 2 359 0 2 0 0 0 0.11 0.17 2 0 0 NA NA NA 37 9 11 54.18 53.62 43.38 0 2 8 Whitelist LUSC-US 0.54 0.38 0 0 0.48 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 2 178027030 178251684 2 5 359 0 0 1 1 3 0.57 0 5 0 0 5 3 3 45 6 6 54.18 73.31 26.58 3 4 2 Whitelist LUSC-US 0.93 0.02 0 0 0.64 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 3 188927038 189073831 6 6 359 0 5 1 0 0 0.01 0 3 0 0 NA NA NA 45 7 8 54.18 53.41 43.51 1 6 9 Whitelist LUSC-US 0.25 0 0 0 0.19 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 4 36746924 164424936 1 7 359 3 4 0 0 0 0.06 0 11 0 0 11 7 11 11 7 7 54.18 0.05 99.74 1 2 1 Whitelist LUSC-US 0.54 0.02 0 0 0.48 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 5 119741 164149170 1 8 359 4 2 0 0 2 0.06 0.13 12 0 0 12 5 6 13 5 6 54.18 25.76 71.39 7 4 2 Whitelist LUSC-US 0.41 0.32 0 0 0.48 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 6 20921149 148325449 1 12 359 4 8 0 0 0 0 0.18 22 0 0 22 6 16 25 6 7 54.18 40.16 59.62 3 2 3 Whitelist LUSC-US 0.12 0.4 0 0 0.08 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 24 0.03 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 7 3406252 121161205 1 13 359 5 8 0 0 0 0 0.91 22 0 0 22 7 22 25 7 7 54.18 88.3 11.48 7 3 4 Whitelist LUSC-US 0.13 1 0 0 0.09 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 26 0.04 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 8 15464888 128190548 1 8 359 4 4 0 0 0 0.05 1 13 0 0 13 5 12 14 5 5 54.18 72.08 24.5 2 3 2 Whitelist LUSC-US 0.54 1 0 0 0.46 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 16 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 9 104048217 104181714 3 3 359 0 1 1 1 0 0.8 0.04 5 0 0 5 3 5 29 7 9 54.18 43.69 55.61 0 3 4 Whitelist LUSC-US 0.87 0.14 0 0 0.84 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 10 4998881 105675164 1 8 359 3 5 0 0 0 0.03 0.31 22 0 0 22 3 7 23 4 7 54.18 78.32 21.51 1 3 1 Whitelist LUSC-US 0.41 0.56 0 0 0.33 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 16 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 11 129085746 130013712 3 3 359 1 2 0 0 0 0.3 0.13 3 0 0 NA NA NA 21 5 7 54.18 99.46 0.11 0 3 4 Whitelist LUSC-US 0.62 0.32 0 0 0.59 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 12 91178725 91355154 10 10 359 0 10 0 0 0 0 0 7 0 0 7 3 3 31 5 7 54.18 60.94 38.98 0 11 2 Whitelist LUSC-US 0 0.01 0 0 0 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 20 0.03 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 13 42520532 77596253 1 7 359 0 2 0 1 4 0.3 0.66 7 0 0 7 4 4 8 4 5 54.18 16.88 83.12 3 2 3 Whitelist LUSC-US 0.77 0.87 0 0 0.59 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 10 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 14 46843555 77440825 1 3 359 1 1 0 0 1 0.57 0.13 4 0 0 4 3 4 7 4 4 54.18 81.29 2.79 1 4 3 Whitelist LUSC-US 0.87 0.32 0 0 0.64 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 15 92431412 92514324 2 2 359 2 0 0 0 0 0.11 0.75 3 0 0 NA NA NA 13 5 5 54.18 57.41 37.81 0 3 4 Whitelist LUSC-US 0.54 0.91 0 0 0.48 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 16 2201298 85361043 1 8 359 0 6 0 0 2 0 0.14 15 0 0 15 3 8 15 3 8 54.18 15.28 79.73 2 2 3 Whitelist LUSC-US 21 0.06 0.34 0 0 0.03 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 14 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 17 1834337 74082720 1 8 359 1 6 0 0 1 0 0.19 12 0 0 12 5 8 14 6 9 54.18 62.05 33.52 6 3 2 Whitelist LUSC-US 0.06 0.41 0 0 0.09 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 15 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 18 30645255 67883978 1 3 359 3 0 0 0 0 0.03 0.74 1 0 0 NA NA NA NA NA NA 54.18 61.81 37.77 0 3 NA Whitelist LUSC-US 0.41 0.91 0 0 0.33 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 19 12884811 47856436 1 3 359 0 3 0 0 0 0.03 0.57 3 0 0 NA NA NA NA NA NA 54.18 99.83 0 1 3 5 Whitelist LUSC-US 0.41 0.79 0 0 0.33 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 20 25584002 46327460 1 4 359 1 1 0 0 2 0.57 0.85 5 0 0 5 3 4 6 3 3 54.18 54.29 44.71 0 2 1 Whitelist LUSC-US 0.68 0.99 0 0 0.64 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 21 36146815 43187219 1 6 359 1 3 0 0 2 0.11 0.09 7 0 0 7 5 7 7 5 7 54.18 0.27 69.94 0 2 3 Whitelist LUSC-US 0.54 0.25 0 0 0.48 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 10 0.01 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b 22 20767150 43500191 1 8 359 1 4 0 0 3 0.04 0.04 10 0 0 10 5 9 13 5 7 54.18 99.96 0.04 7 3 4 Whitelist LUSC-US 8 0.54 0.15 0 0 0.36 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 13 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9a874b64-d0d6-416e-97bc-e9071ed0b16b X 6549692 107706907 1 7 359 3 2 0 0 2 0.14 0.05 5 0 0 5 3 5 6 4 4 54.18 73.56 26.44 0 1 2 Whitelist LUSC-US 0.62 0.17 0 0 0.59 0 No LUSC-US 9a874b64-d0d6-416e-97bc-e9071ed0b16b LUSC 0.48 2.68 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7577093_T_C,CN:2 3 LUSC-US DO26427 TCGA-18-3415 9a874b64-d0d6-416e-97bc-e9071ed0b16b male alive C34.1 77 NA 1810 NA Included Lung-SCC LUSC US 0 59.54 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 1 76535798 99663065 47 61 428 8 11 16 12 14 0.43 0 41 0 0 41 5 5 61 5 7 63.61 79.75 20.25 2 5 8 Whitelist LUSC-US 2_5 0.62 0 0 0 0.64 1 Low confidence LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC With other complex events 108 0.13 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 2 54782646 232522086 1 23 428 0 5 0 0 18 0 0.73 11 0 0 11 5 5 19 5 7 63.61 97.32 0 3 3 4 Whitelist LUSC-US 1_X 0.54 0.9 0 0 0.07 1 Linked to low confidence LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC With other complex events 28 0.03 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 3 48477064 188733553 1 13 428 0 5 0 0 8 0 0.22 15 0 0 15 5 6 16 5 7 63.61 53.31 43.54 1 5 2 Whitelist LUSC-US 14 0.54 0.45 0 0 0.07 1 Linked to high confidence LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC With other complex events 18 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 4 1765550 100349832 1 14 428 1 1 1 2 9 0.9 0.56 15 0 0 15 10 11 21 10 10 63.61 28.62 69.01 7 4 5 Whitelist LUSC-US 6 0.9 0.79 0 0 0.92 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 19 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 5 30463771 37215413 6 9 428 0 2 2 2 3 0.57 0.55 10 0 0 10 4 8 14 7 7 63.61 6.16 93.7 0 2 1 Whitelist LUSC-US 1 0.97 0.78 0 0 0.64 1 Low confidence LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC With other complex events 15 0.02 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 6 30277793 164158989 1 27 428 1 3 2 2 19 0.8 0.01 32 0 0 32 5 8 34 5 5 63.61 90.84 6.32 0 5 9 Whitelist LUSC-US 4 0.93 0.05 0 0 0.84 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 35 0.04 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 7 NA NA 0 0 428 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA 11 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.7 0 NA NA 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 8 104636742 129414711 4 8 428 1 1 1 1 4 1 0.27 1 0 0 NA NA NA 12 4 4 63.61 83.4 16.5 0 4 NA Whitelist LUSC-US 0.87 0.51 0 0 1 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 12 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 9 20971421 23815876 1 1 428 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 3 63.61 13.04 83.79 0 0 2 Whitelist LUSC-US 0.62 0.02 0 NA 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 10 NA NA 0 0 428 0 0 0 0 0 NA 0.73 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.9 0 NA NA 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 11 74128666 74144159 1 1 428 1 0 0 0 0 0.39 0.57 2 0 NA NA NA NA 8 6 6 63.61 99.57 0 0 3 4 Whitelist LUSC-US 0.62 0.79 0 NA 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 12 38097558 60138761 1 4 428 1 1 0 0 2 0.57 0.73 5 0 0 5 3 5 5 3 3 63.61 96.18 0.08 0 4 2 Whitelist LUSC-US 0.62 0.91 0 0 0.64 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 13 NA NA 0 0 428 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 8 5 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.67 0 NA NA 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 14 24946194 66674963 15 25 428 1 4 5 5 10 0.41 0 21 0 0 21 7 17 41 9 17 63.61 79.37 19.72 0 4 6 Whitelist LUSC-US 3 0.62 0 0 0 0.62 1 High confidence LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC With other complex events 40 0.05 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 15 80990732 81437077 1 1 428 0 1 0 0 0 0.39 0.66 2 0 NA NA NA NA 5 3 3 63.61 99.92 0 0 3 5 Whitelist LUSC-US 0.62 0.87 0 NA 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 16 NA NA 0 0 428 0 0 0 0 0 NA 0.23 NA 0.55 NA NA NA NA 8 3 6 0 0 0 0 0 0 Whitelist LUSC-US NA 0.46 0.55 NA NA 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 17 31198321 71480303 3 4 428 2 0 0 1 1 0.3 0 11 0 0 11 3 4 16 4 4 63.61 84.92 15.07 0 5 2 Whitelist LUSC-US 0.62 0.02 0 0 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 18 10597363 14044509 4 6 428 3 0 0 1 2 0.11 0 5 0 0 5 0 3 11 3 3 63.61 94 0 0 6 3 Whitelist LUSC-US 0.54 0.02 0 0 0.48 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 10 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 19 28240157 41152655 1 5 428 0 2 0 0 3 0.11 0.6 5 0 0 5 3 4 5 3 4 63.61 51.63 41.09 0 4 2 Whitelist LUSC-US 6 0.62 0.81 0 0 0.48 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 20 31250350 40693820 4 5 428 1 0 2 1 1 0.57 0 7 0 0 7 4 7 22 5 5 63.61 98.95 0 0 5 6 Whitelist LUSC-US 0.68 0.01 0 0 0.64 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 9 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 21 NA NA 0 0 428 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.41 NA NA NA 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca 22 20857386 21161025 3 5 428 0 0 2 1 2 0.3 0 7 0 0 7 0 3 18 3 3 63.61 2.02 97.98 0 20 24 Whitelist LUSC-US X 0.62 0 0 0 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca X 44809178 107538700 1 9 428 1 2 0 0 6 0.3 0.66 7 0 0 7 7 7 12 12 12 63.61 35.36 64.08 0 1 2 Whitelist LUSC-US 2 0.85 0.87 0 0 0.59 1 No LUSC-US 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca LUSC 0.82 3.26 Lung-SCC NA 12 0.01 nonsynonymous_SNV,17_7578394_A_T,CN:3 4 LUSC-US DO27334 TCGA-66-2793 9af6ed4e-8cdc-4f49-84e9-ba1053b5b3ca male deceased C34.2 68 306 NA NA Included Lung-SCC LUSC US 1 10.07 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 1 72982051 110634647 5 5 75 2 0 1 2 0 0.53 0 3 0 0 NA NA NA 21 6 6 56.82 79.97 17.05 10 2 3 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 10 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 2 95870042 101409925 1 6 75 2 1 0 0 3 0.3 0.01 1 0 0 NA NA NA 11 4 5 56.82 91.63 8.26 0 3 NA Whitelist LUSC-US 0.93 0.05 0 0 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 9 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 3 146363999 146397800 1 1 75 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA 5 3 3 56.82 52.49 44.36 1 5 6 Whitelist LUSC-US 0.62 0.39 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 4 60161800 164914363 1 3 75 2 0 0 0 1 0.11 0.49 3 NA 0 NA NA NA 4 3 4 56.82 99.78 0.02 0 2 3 Whitelist LUSC-US 0.62 0.73 NA 0 0.48 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 5 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 5 18950400 25709818 1 1 75 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 9 3 5 56.82 25.47 71.87 0 4 5 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 6 52443307 90254583 1 3 75 0 2 0 1 0 0.3 0.09 6 0 0 6 4 5 14 5 6 56.82 26.04 73.81 0 2 3 Whitelist LUSC-US 0.62 0.25 0 0 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 6 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 7 30554387 30624289 1 1 75 1 0 0 0 0 0.39 0.8 1 NA NA NA NA NA 5 3 3 56.82 21.97 75.3 0 2 NA Whitelist LUSC-US 0.62 0.95 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 8 49760272 142685970 1 4 75 1 3 0 0 0 0.11 0.43 5 0 0 5 3 5 6 3 3 56.82 99.99 0 0 3 4 Whitelist LUSC-US 0.54 0.68 0 0 0.48 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 8 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 9 NA NA 0 0 75 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.62 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 10 1460890 1570028 2 2 75 1 1 0 0 0 0.57 0.09 3 0 0 NA NA NA 11 6 8 56.82 80.78 19.05 0 2 3 Whitelist LUSC-US 0.68 0.24 0 0 0.64 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 11 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 12 60268697 60287255 1 1 75 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 8 4 4 56.82 96.25 0.01 0 2 3 Whitelist LUSC-US 0.62 0.94 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 13 99731953 99753949 2 2 75 0 0 1 1 0 0.57 0.12 1 0 0 NA NA NA NA NA NA 56.82 53.12 46.88 0 1 NA Whitelist LUSC-US 0.68 0.3 0 0 0.64 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 14 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 15 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 16 71929359 71970145 1 1 75 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 5 56.82 56.88 37.76 0 0 1 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 17 27027281 29031847 2 2 75 0 0 1 1 0 0.57 0.15 4 0 0 4 0 4 7 4 4 56.82 68.22 27.33 0 4 5 Whitelist LUSC-US 0.68 0.34 0 0 0.64 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 18 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 19 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 20 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 21 NA NA 0 0 75 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.82 NA NA NA 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa 22 18228627 18240412 1 1 75 0 0 0 1 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 56.82 100 0 0 3 NA Whitelist LUSC-US 0.62 0.81 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::9dff11cd-0784-4a60-9c77-43f8957d3dfa X 6421732 6674993 1 1 75 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 56.82 0.16 99.84 0 1 2 Whitelist LUSC-US 0.62 0.41 NA NA 0.59 0 No LUSC-US 9dff11cd-0784-4a60-9c77-43f8957d3dfa LUSC 0.53 2.74 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 LUSC-US DO26692 TCGA-90-7767 9dff11cd-0784-4a60-9c77-43f8957d3dfa male alive C34.1 56 NA 89 NA Included Lung-SCC LUSC US 0 2.93 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 1 146956507 147065315 2 2 118 1 1 0 0 0 0.57 0.5 3 0 0 NA NA NA 11 7 7 35.9 0.59 99.41 0 2 1 Whitelist LUSC-US 0.68 0.74 0 0 0.64 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 2 145723454 145893859 2 2 118 0 0 1 1 0 0.57 0.32 2 0 0 NA NA NA 11 5 5 35.9 3.52 93.78 0 1 2 Whitelist LUSC-US 0.68 0.57 0 0 0.64 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 3 88988217 164480451 1 2 118 2 0 0 0 0 0.11 0.28 3 0 0 NA NA NA 4 3 4 35.9 61.19 35.64 0 3 2 Whitelist LUSC-US 0.54 0.53 0 0 0.48 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 4 21190848 161052197 1 5 118 5 0 0 0 0 0 0.58 7 0 0 7 5 7 8 5 5 35.9 70.49 29.41 0 1 0 Whitelist LUSC-US 0.1 0.81 0 0 0.07 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 10 0.04 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 5 52311245 52326778 1 1 118 1 0 0 0 0 0.39 0.71 1 0 NA NA NA NA 6 4 4 35.9 94.39 2.94 1 1 NA Whitelist LUSC-US 0.62 0.9 0 NA 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 6 21190605 162399360 1 5 118 1 2 0 0 2 0.3 0.85 3 0 0 NA NA NA NA NA NA 35.9 0.01 99.84 1 2 1 Whitelist LUSC-US 0.62 0.98 0 0 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 7 17586252 17675467 1 1 118 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 35.9 0.06 99.72 0 2 4 Whitelist LUSC-US 0.62 0.09 NA NA 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 8 22768607 26589905 3 3 118 1 0 1 1 0 0.8 0 4 0 0 4 4 4 19 8 8 35.9 85.17 11.41 0 1 2 Whitelist LUSC-US 0.87 0 0 0 0.84 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 9 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 10 75500200 113443639 1 3 118 2 1 0 0 0 0.3 1 6 0 0 6 5 6 7 5 5 35.9 0.31 99.51 0 2 1 Whitelist LUSC-US 0.62 1 0 0 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 11 51563420 57867799 2 2 118 0 0 1 1 0 0.57 0.07 1 0 0 NA NA NA 4 3 3 35.9 37.01 62.41 0 2 NA Whitelist LUSC-US 0.68 0.21 0 0 0.64 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 12 69578162 70359971 2 2 118 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 14 4 5 35.9 31.41 68.51 0 3 5 Whitelist LUSC-US 0.68 0.01 0 0 0.64 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 13 73113568 74192120 1 1 118 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 35.9 99.06 0.94 0 1 2 Whitelist LUSC-US 0.62 0.42 NA NA 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 14 67019016 67106828 1 1 118 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA 4 3 4 35.9 0.66 95.63 0 2 NA Whitelist LUSC-US 0.62 0.41 NA NA 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 15 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 16 81356374 87638066 4 4 118 1 0 1 2 0 0.57 0 12 0 0 12 6 7 20 7 7 35.9 45.04 54.91 0 2 3 Whitelist LUSC-US 0.68 0.01 0 0 0.64 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 17 5262218 30747081 4 4 118 3 0 0 1 0 0.11 0 16 0 0 16 7 16 28 10 10 35.9 19.06 76.22 0 2 3 Whitelist LUSC-US 0.54 0 0 0 0.48 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 18 36320722 37138993 1 1 118 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.9 0 99.96 0 2 NA Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 19 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 20 NA NA 0 0 118 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 21 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a 22 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::a3e1ac67-a1f2-44fb-8343-a7e8239fc24a X 107656669 146617357 1 2 118 2 0 0 0 0 0.11 0.84 4 0 0 4 4 4 7 7 7 35.9 100 0 0 0 1 Whitelist LUSC-US 0.54 0.97 0 0 0.48 0 No LUSC-US a3e1ac67-a1f2-44fb-8343-a7e8239fc24a LUSC 0.48 1.8 Lung-SCC NA 4 0.02 nonsynonymous_SNV,17_7577551_A_C,CN:2 5 LUSC-US DO26540 TCGA-60-2724 a3e1ac67-a1f2-44fb-8343-a7e8239fc24a male alive C34.9 47 NA 37 NA Included Lung-SCC LUSC US 0 1.22 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 1 82323412 119584894 8 10 176 2 1 3 2 2 0.8 0 13 0 0 13 8 8 39 8 9 71.16 91.07 5.9 0 2 3 Whitelist LUSC-US 0.96 0 0 0 0.84 1 High confidence LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC Canonical without polyploidization 18 0.05 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 2 42017310 234428300 1 7 176 3 0 1 2 1 0.34 0.41 10 0 0 10 3 4 11 3 3 71.16 97.3 0 3 3 4 Whitelist LUSC-US 0.62 0.66 0 0 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 13 0.04 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 3 136078107 183286528 5 7 176 0 1 1 3 2 0.28 0 10 0 0 10 4 10 27 9 9 71.16 52.53 44.01 2 5 6 Whitelist LUSC-US 0.77 0 0 0 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 12 0.03 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 4 116170237 116276440 1 1 176 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 4 6 71.16 18.4 81.59 0 2 3 Whitelist LUSC-US 0.62 0.02 NA NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 5 56233570 133230251 1 2 176 1 0 1 0 0 0.57 0.06 1 0 0 NA NA NA 4 0 3 71.16 25.47 71.85 2 2 NA Whitelist LUSC-US 0.68 0.19 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 4 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 6 150311614 150326575 2 2 176 1 0 1 0 0 0.57 0.01 1 0 0 NA NA NA 4 0 3 71.16 99.8 0 1 3 NA Whitelist LUSC-US 0.68 0.05 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 4 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 7 97612664 133045933 2 2 176 0 0 1 1 0 0.57 0.61 4 0 0 4 4 4 16 7 10 71.16 76.9 22.87 2 2 3 Whitelist LUSC-US 0.68 0.83 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 4 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 8 47318707 47676740 1 1 176 1 0 0 0 0 0.39 0.61 1 0 NA NA NA NA 5 3 4 71.16 80.57 19.43 0 2 NA Whitelist LUSC-US 0.62 0.82 0 NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 9 15937612 36298893 1 1 176 1 0 0 0 0 0.39 0.05 5 NA NA 5 3 4 11 5 9 71.16 26.26 70.64 1 4 0 Whitelist LUSC-US 0.62 0.17 NA NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 10 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 0 0 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 11 69428460 70165877 1 2 176 1 0 1 0 0 0.57 0.72 8 0 0 8 4 8 11 4 4 71.16 99.57 0 0 6 7 Whitelist LUSC-US 0.68 0.9 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 4 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 12 8822616 42841454 3 6 176 0 1 2 0 3 0.3 0.01 24 0 0 24 6 7 27 6 7 71.16 97.83 2.09 1 8 16 Whitelist LUSC-US 0.62 0.03 0 0 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 9 0.03 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 13 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 0 0 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 14 90765255 90899998 1 1 176 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 71.16 99.08 0 0 3 NA Whitelist LUSC-US 0.62 0.41 NA NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 15 56994382 76432931 1 2 176 1 1 0 0 0 0.57 0.25 4 NA 0 4 3 4 6 3 4 71.16 94.58 0.35 0 3 2 Whitelist LUSC-US 0.68 0.49 NA 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 4 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 16 10733473 11639618 1 1 176 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 8 3 4 71.16 99.17 0.74 0 4 6 Whitelist LUSC-US 0.62 0.59 NA NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 17 33147584 34893677 2 5 176 0 1 0 1 3 0.57 0 5 0 0 5 3 5 20 6 6 71.16 68.49 27.08 0 2 1 Whitelist LUSC-US 0.68 0 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 7 0.02 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 18 12457323 69639362 1 5 176 2 0 0 0 3 0.11 0.15 8 0 0 8 5 8 11 5 6 71.16 85.55 9.81 2 4 3 Whitelist LUSC-US 20 0.45 0.35 0 0 0.48 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 7 0.02 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 19 7695992 42969065 1 4 176 2 1 1 0 0 0.57 0 10 0 0 10 4 4 11 4 4 71.16 92.15 0 1 4 3 Whitelist LUSC-US 0.68 0 0 0 0.64 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 8 0.02 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 20 30088250 54957114 3 5 176 1 2 0 0 2 0.3 0.01 9 0 0 9 7 9 16 8 12 71.16 92.66 0 0 5 4 Whitelist LUSC-US 18 0.68 0.03 0 0 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 8 0.02 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 21 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 0 0 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 22 NA NA 0 0 176 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 0 0 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::adc853b1-b8bf-488c-a1e2-e95603459b55 X 54464335 54619892 1 1 176 0 0 0 1 0 0.39 0.39 1 0 NA NA NA NA 4 3 3 71.16 100 0 0 1 NA Whitelist LUSC-US 0.62 0.64 0 NA 0.59 1 No LUSC-US adc853b1-b8bf-488c-a1e2-e95603459b55 LUSC 0.41 3.04 Lung-SCC NA 2 0.01 NA 3 LUSC-US DO26934 TCGA-98-8022 adc853b1-b8bf-488c-a1e2-e95603459b55 male alive C34.1 61 NA 224 NA Included Lung-SCC LUSC US 0 7.37 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 1 21171017 178710452 1 7 232 0 6 1 0 0 0 0.09 12 0 0 12 5 6 12 5 5 60.48 48.71 48.29 20 2 3 Whitelist LUSC-US 0.13 0.24 0 0 0.09 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 14 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 2 24457554 239354641 1 18 232 4 5 2 0 7 0.15 1 21 0 0 21 7 9 22 7 9 60.48 99.8 0.1 27 3 4 Whitelist LUSC-US 19 0.54 1 0 0 0.59 0 Linked to low confidence LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC With other complex events 29 0.06 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 3 11460567 193401172 1 13 232 4 7 0 0 2 0.01 0.9 15 0 0 15 5 5 16 5 5 60.48 52.83 44.09 33 2 6 Whitelist LUSC-US 0.21 1 0 0 0.16 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 24 0.05 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 4 145973387 184148814 1 2 232 0 2 0 0 0 0.11 0 3 NA 0 NA NA NA NA NA NA 60.48 0.7 99.28 4 2 3 Whitelist LUSC-US 0.54 0 NA 0 0.48 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 5 58283197 149630530 1 7 232 1 4 0 0 2 0.04 0.59 7 0 0 7 7 7 11 7 7 60.48 25.67 71.13 15 2 3 Whitelist LUSC-US 0.62 0.81 0 0 0.36 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 12 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 6 44219504 47208310 2 6 232 0 1 1 0 4 0.57 0.02 6 0 0 6 6 6 13 8 9 60.48 99.84 0 7 4 5 Whitelist LUSC-US 12_19 0.54 0.07 0 0 0.64 0 Linked to low confidence LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC After polyploidization 8 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 7 11842849 153033219 1 4 232 0 3 0 0 1 0.03 0.03 3 0 0 NA NA NA NA NA NA 60.48 99.78 0 11 3 4 Whitelist LUSC-US 0.21 0.1 0 0 0.33 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 8 38796399 102067885 5 6 232 2 2 0 1 1 0.53 0 8 0 0 8 7 8 44 12 12 60.48 77.67 21.69 5 4 5 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 11 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 9 23676928 24241381 2 2 232 1 0 0 1 0 0.57 0.87 1 0 0 NA NA NA NA NA NA 60.48 2.72 97.14 0 2 NA Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 10 52246696 77451413 1 4 232 1 2 0 0 1 0.3 0.16 3 0 0 NA NA NA 5 4 5 60.48 96.57 0 3 3 4 Whitelist LUSC-US 0.68 0.37 0 0 0.59 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 11 400656 128835047 1 6 232 0 6 0 0 0 0 0.28 11 0 0 11 8 8 12 8 8 60.48 99.42 0 14 4 5 Whitelist LUSC-US 0.04 0.52 0 0 0.03 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 12 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 12 3068127 46210921 3 11 232 0 1 2 0 8 0.3 0.01 9 0 0 9 5 8 21 5 5 60.48 96.26 0 8 4 3 Whitelist LUSC-US 19_6_8 0.62 0.05 0 0 0.59 0 Linked to low confidence LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC With other complex events 14 0.03 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 13 69014672 69049770 1 1 232 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 60.48 100 0 0 3 NA Whitelist LUSC-US 0.62 0.21 NA NA 0.59 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 14 21595357 89998492 1 6 232 0 2 0 0 4 0.11 0.45 9 0 0 9 3 3 15 5 7 60.48 10.7 73.39 4 2 3 Whitelist LUSC-US 19_8 0.62 0.7 0 0 0.48 0 Linked to low confidence LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC With other complex events 8 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 15 30119162 67340895 1 2 232 0 2 0 0 0 0.11 0.23 4 0 0 4 4 4 5 5 5 60.48 99.92 0 6 4 5 Whitelist LUSC-US 0.54 0.46 0 0 0.48 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 16 606952 85028090 1 4 232 0 4 0 0 0 0.01 0.54 6 0.13 0 6 6 6 7 7 7 60.48 99.91 0 5 3 4 Whitelist LUSC-US 0.21 0.77 0.13 0 0.16 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 17 1217340 80379536 1 19 232 1 11 0 1 6 0 0 33 0 0 33 6 6 34 6 7 60.48 98.99 0 12 8 4 Whitelist LUSC-US 5_6 0.21 0 0 0 0 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 32 0.07 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 18 10939865 12449580 1 2 232 0 2 0 0 0 0.11 0.54 3 0 0 NA NA NA NA NA NA 60.48 0.13 99.84 0 2 5 Whitelist LUSC-US 0.54 0.77 0 0 0.48 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 19 9018583 18930769 9 13 232 0 5 1 3 4 0.09 0 19 0 0 19 5 8 40 5 8 60.48 45.1 46.94 8 3 4 Whitelist LUSC-US 2 0.54 0 0 0 0.48 0 Low confidence LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC With other complex events 22 0.05 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 20 47643269 49737995 1 2 232 0 2 0 0 0 0.11 0.25 4 NA 0 4 3 4 6 3 3 60.48 92.91 0 5 5 4 Whitelist LUSC-US 0.54 0.49 NA 0 0.48 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 21 NA NA 0 0 232 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 22 29400425 31190280 2 2 232 0 1 0 1 0 0.57 0.01 4 0 0 4 0 3 6 4 4 60.48 100 0 0 4 5 Whitelist LUSC-US 0.68 0.03 0 0 0.64 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::aecf85cc-058c-46f3-9cdc-3573ac3b8438 X 16425432 155195823 1 4 232 0 2 0 0 2 0.11 0.05 3 0 0 NA NA NA 7 7 7 60.48 2.24 97.71 6 1 2 Whitelist LUSC-US 0.68 0.16 0 0 0.48 0 No LUSC-US aecf85cc-058c-46f3-9cdc-3573ac3b8438 LUSC 0.56 3.19 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577548_A_C,CN:5 4 LUSC-US DO26475 TCGA-94-7943 aecf85cc-058c-46f3-9cdc-3573ac3b8438 male alive C34.3 80 NA 143 NA Included Lung-SCC LUSC US 0 4.7 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 1 109301543 245628992 1 6 84 2 1 1 0 2 0.57 0.16 7 0 0 7 5 7 11 7 9 65.19 67.38 32.62 3 4 3 Whitelist LUSC-US 0.93 0.36 0 0 0.64 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 10 0.06 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 2 120453036 126849782 4 5 84 1 1 1 1 1 1 0 7 0 0 7 5 7 24 11 12 65.19 99.9 0 0 5 4 Whitelist LUSC-US 0.93 0 0 0 1 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 9 0.05 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 3 160956624 160989139 1 3 84 0 0 0 1 2 0.39 0.19 2 0 0 NA NA NA 7 3 3 65.19 52.58 44.34 0 4 8 Whitelist LUSC-US 0.87 0.42 0 0 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 4 0.02 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 4 NA NA 0 0 84 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.15 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 5 151618 177026490 1 10 84 3 3 0 1 3 0.28 0 13 0 0 13 3 7 14 4 5 65.19 67.17 29.96 1 5 3 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 17 0.1 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 6 NA NA 0 0 84 0 0 0 0 0 NA 0.35 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.61 0 NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 7 152286142 152297089 1 1 84 0 1 0 0 0 0.39 0.63 1 0 NA NA NA NA NA NA NA 65.19 99.78 0 3 4 NA Whitelist LUSC-US 0.62 0.84 0 NA 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 8 NA NA 0 0 84 0 0 0 0 0 NA 1 NA 0.02 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0.02 NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 9 129622702 133726092 1 1 84 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 8 3 8 65.19 66.39 31.07 0 3 4 Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 10 NA NA 0 0 84 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.41 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 11 NA NA 0 0 84 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist LUSC-US NA 0.95 0 NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 12 NA NA 0 0 84 0 0 0 0 0 NA 0.6 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 0 NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 13 NA NA 0 0 84 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.93 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 14 NA NA 0 0 84 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.16 0 NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 15 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 16 NA NA 0 0 84 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.22 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 17 73705832 73861741 1 1 84 0 1 0 0 0 0.39 0.5 2 NA NA NA NA NA 4 3 3 65.19 95.27 0 0 4 6 Whitelist LUSC-US 0.62 0.74 NA NA 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 18 63915088 63925411 1 1 84 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 65.19 99.95 0.01 0 2 3 Whitelist LUSC-US 0.62 0.04 0 NA 0.59 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 2 0.01 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 19 NA NA 0 0 84 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.46 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 20 NA NA 0 0 84 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.68 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 21 NA NA 0 0 84 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.52 NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 22 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 0 0 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 X 44762753 93738693 1 2 84 2 0 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 65.19 0.11 99.89 0 0 2 Whitelist LUSC-US 0.54 0.69 NA 0 0.48 0 No LUSC-US b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 LUSC 0.64 3.27 Lung-SCC NA 4 0.02 NA 4 LUSC-US DO26976 TCGA-56-7582 b5e2cbda-bbfa-4ef8-a9c4-cb978bef9b23 male alive C34.3 83 NA 26 NA Included Lung-SCC LUSC US 0 0.86 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 1 10985224 229819545 1 18 944 3 11 0 3 1 0 0.81 24 0 0 24 7 7 24 7 7 56.53 46.5 50.39 5 3 2 Whitelist LUSC-US 0.18 0.95 0 0 0.07 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 35 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 2 141812948 142844241 3 3 944 2 0 1 0 0 0.3 0 7 0 0 7 6 7 73 6 11 56.53 76.81 20.5 10 1 2 Whitelist LUSC-US 0.62 0.02 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 6 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 3 189575556 189684886 13 14 944 1 9 2 1 1 0 0 5 0 0 5 0 3 79 9 9 56.53 71.04 25.69 4 8 12 Whitelist LUSC-US 0.08 0 0 0 0.11 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 27 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 4 29110876 161026248 1 11 944 1 5 0 0 5 0.01 0.09 14 0 0 14 3 6 18 3 6 56.53 40.2 59.57 9 3 2 Whitelist LUSC-US 0.41 0.25 0 0 0.19 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 17 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 5 38975065 167888222 1 11 944 2 6 0 0 3 0.01 0.95 38 0 0 38 13 15 49 13 15 56.53 47.44 49.9 13 2 3 Whitelist LUSC-US 0.34 1 0 0 0.16 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 19 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 6 129964240 129991612 3 3 944 0 1 1 1 0 0.8 0.45 4 0 0 4 4 4 37 9 9 56.53 99.7 0.15 0 3 5 Whitelist LUSC-US 0.87 0.7 0 0 0.84 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 6 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 7 25417234 138775947 1 17 944 2 9 0 0 6 0 0.83 23 0 0 23 5 9 27 5 5 56.53 55.76 41.69 5 4 2 Whitelist LUSC-US 18_2 0.1 0.97 0 0 0.02 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 28 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 8 3614252 131469655 1 18 944 6 3 0 1 8 0.04 0.94 19 0 0 19 6 7 20 7 7 56.53 32.03 67.86 3 2 3 Whitelist LUSC-US 2 0.62 1 0 0 0.39 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 28 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 9 5539401 5594164 3 3 944 0 2 0 1 0 0.3 0.21 3 0 0 NA NA NA 14 3 9 56.53 54.19 45.65 0 3 8 Whitelist LUSC-US 0.62 0.43 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 6 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 10 1414506 33523304 5 6 944 1 3 0 1 1 0.28 0.39 16 0 0 16 4 7 33 5 7 56.53 48.76 51.06 2 4 2 Whitelist LUSC-US 0.62 0.64 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 11 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 11 3809014 133227518 1 18 944 4 8 0 0 6 0 0.4 16 0 0 16 5 12 20 5 5 56.53 59.59 36.34 9 4 3 Whitelist LUSC-US 0.12 0.64 0 0 0.08 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 30 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 12 13408215 59265858 3 4 944 0 1 1 1 1 0.8 0.64 12 0 0 12 4 9 20 5 10 56.53 63.96 35.96 9 3 4 Whitelist LUSC-US 0.68 0.85 0 0 0.84 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 7 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 13 29289007 108726175 1 13 944 4 5 0 1 3 0.08 0.28 8 0 0 8 3 4 10 4 6 56.53 75.27 24.73 1 5 3 Whitelist LUSC-US 18 0.62 0.53 0 0 0.48 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 23 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 14 53135636 93271142 1 4 944 0 4 0 0 0 0.01 0 12 0 0 12 5 12 16 5 5 56.53 52.29 44.55 1 3 2 Whitelist LUSC-US 0.21 0.01 0 0 0.16 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 8 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 15 36589654 98224839 1 4 944 1 2 0 0 1 0.3 0 4 0 0 4 3 4 4 3 3 56.53 52.38 47.52 4 3 0 Whitelist LUSC-US 0.68 0.01 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 7 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 16 2660479 81659189 1 12 944 2 7 0 0 3 0 0.76 18 0 0 18 4 7 18 4 7 56.53 92.42 2.42 7 3 4 Whitelist LUSC-US 0.04 0.93 0 0 0.08 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 21 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 17 57917646 57947424 5 6 944 1 4 0 0 1 0.04 0.11 1 0 0 NA NA NA 11 5 6 56.53 68.04 27.02 0 3 NA Whitelist LUSC-US 0.54 0.28 0 0 0.36 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 11 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 18 31777572 39967346 5 33 944 1 3 1 0 28 0.28 0 29 0 0 29 5 8 46 7 9 56.53 29.97 64.88 6 2 3 Whitelist LUSC-US 7 0.62 0 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 38 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 19 22154864 23783129 2 2 944 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 32 5 5 56.53 57.42 34.93 2 5 3 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 4 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 20 1405271 40395460 1 6 944 2 0 2 1 1 0.53 0.82 9 0 0 9 3 6 10 3 3 56.53 21.8 77.58 0 1 2 Whitelist LUSC-US 0.93 0.96 0 0 0.64 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 11 0.01 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 21 NA NA 0 0 944 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 0 NA NA 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f 22 18573581 22033664 8 27 944 3 2 2 1 19 0.8 0 19 0 0 19 3 4 33 3 4 56.53 66.13 22.76 0 3 7 Whitelist LUSC-US 18 0.67 0 0 0 0.84 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 35 0.02 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::b913d254-8307-4b8a-8313-d978e32bb38f X 923323 96463480 1 3 944 2 1 0 0 0 0.3 0 6 0 0 6 3 5 16 4 8 56.53 65.83 29.86 1 1 2 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US b913d254-8307-4b8a-8313-d978e32bb38f LUSC 0.75 2.86 Lung-SCC NA 6 0 nonsynonymous_SNV,17_7578271_A_T,CN:2 4 LUSC-US DO27747 TCGA-66-2766 b913d254-8307-4b8a-8313-d978e32bb38f male alive C34.1 54 NA 31 NA Included Lung-SCC LUSC US 0 1.02 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 1 46782353 202448234 1 4 139 0 0 0 1 3 0.39 0.64 10 0 0 10 4 5 13 4 5 67.88 46.17 50.86 4 1 2 Whitelist LUSC-US 0.68 0.85 0 0 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 2 141668399 142075420 2 2 139 2 0 0 0 0 0.11 0.12 5 0 0 5 5 5 17 5 5 67.88 91.66 8.23 2 2 1 Whitelist LUSC-US 0.54 0.31 0 0 0.48 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 3 175605983 176951170 4 4 139 1 1 1 1 0 1 0.09 13 0 0 13 5 5 23 5 5 67.88 52.51 44.28 26 8 6 Whitelist LUSC-US 1 0.26 0 0 1 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 4 85039857 182091086 1 4 139 3 1 0 0 0 0.11 0.86 6 0 0 6 3 5 8 5 7 67.88 94.96 2.32 4 3 1 Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 5 59300933 160929187 1 4 139 4 0 0 0 0 0.01 1 4 0 0 4 3 4 10 3 7 67.88 25.59 71.74 7 2 0 Whitelist LUSC-US 0.21 1 0 0 0.16 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 6 53406769 163757676 1 6 139 3 2 0 0 1 0.14 0.59 9 0 0 9 5 7 10 5 5 67.88 66.81 33.05 4 4 2 Whitelist LUSC-US 0.62 0.81 0 0 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 11 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 7 69122396 110389193 1 3 139 3 0 0 0 0 0.03 0.13 4 0 0 4 3 4 5 3 5 67.88 99.29 0.47 4 5 2 Whitelist LUSC-US 0.41 0.32 0 0 0.33 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 8 3075147 119898302 1 9 139 3 1 0 1 4 0.28 0.03 17 0 0 17 4 8 18 5 6 67.88 92.15 7.84 10 4 2 Whitelist LUSC-US 0.85 0.12 0 0 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 14 0.05 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 9 3408891 3471160 1 1 139 0 0 1 0 0 0.39 0.18 1 NA NA NA NA NA 7 4 5 67.88 99.86 0 0 3 NA Whitelist LUSC-US 0.62 0.4 NA NA 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 10 20154951 56734855 1 4 139 3 0 0 0 1 0.03 0.84 7 0 0 7 3 6 9 4 7 67.88 43.15 56.63 1 4 2 Whitelist LUSC-US 0.54 0.98 0 0 0.33 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 7 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 11 78513463 125258975 1 5 139 3 0 0 0 2 0.03 1 6 0 0 6 3 6 8 3 8 67.88 61.96 37.61 20 3 1 Whitelist LUSC-US 0.45 1 0 0 0.33 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 12 61820497 133781622 4 7 139 0 1 2 1 3 0.57 0 14 0 0 14 4 11 27 4 5 67.88 96.27 0 4 4 5 Whitelist LUSC-US 0.77 0 0 0 0.64 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 11 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 13 92989562 93147090 1 1 139 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 67.88 0.14 99.86 1 1 2 Whitelist LUSC-US 0.62 0.49 NA NA 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 14 45285498 45356705 1 1 139 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 6 3 3 67.88 31.18 67.91 0 1 2 Whitelist LUSC-US 0.62 0.59 NA NA 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 15 NA NA 0 0 139 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 NA NA NA 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 16 6180491 16081270 1 2 139 2 0 0 0 0 0.11 0.1 3 0 0 NA NA NA 11 7 7 67.88 94.82 0.66 0 1 2 Whitelist LUSC-US 0.54 0.27 0 0 0.48 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 17 4069507 4456100 1 1 139 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 67.88 73.81 21.75 0 2 4 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 18 NA NA 0 0 139 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA 7 4 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.94 0 NA NA 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 19 NA NA 0 0 139 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 20 30126044 46068276 2 12 139 0 3 1 0 8 0.11 0 16 0 0 16 9 9 18 9 9 67.88 65.89 25.97 1 5 7 Whitelist LUSC-US 0.83 0 0 0 0.48 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 16 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 21 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 22 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 X 3646910 41568446 1 4 139 3 1 0 0 0 0.11 0.7 1 0 0 NA NA NA NA NA NA 67.88 98.58 1.42 0 1 NA Whitelist LUSC-US 0.54 0.89 0 0 0.48 0 No LUSC-US bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 LUSC 0.75 3.23 Lung-SCC NA 8 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 8 LUSC-US DO26894 TCGA-22-5477 bd15f523-45c4-4d7c-a3cc-4fb56abb0e54 male deceased C34.3 65 1346 NA NA Included Lung-SCC LUSC US 1 44.28 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 1 14645072 118588260 1 7 165 2 1 0 0 4 0.3 0.31 6 0 0 6 6 6 10 6 10 33.64 54.19 42.52 0 1 2 Whitelist LUSC-US 0.62 0.56 0 0 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 10 0.03 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 2 141329443 213000859 1 9 165 7 2 0 0 0 0 0.49 12 0 0 12 6 10 13 7 7 33.64 0.31 99.59 0 2 1 Whitelist LUSC-US 0.12 0.73 0 0 0.08 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 18 0.05 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 3 141119758 191946026 43 44 165 3 14 14 12 1 0.05 0 61 0 0 61 5 21 68 5 7 33.64 96.83 0 16 5 3 Whitelist LUSC-US 0.51 0 0 0 0.48 0 Low confidence LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC With other complex events 87 0.26 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 4 21475811 183681378 1 6 165 2 1 0 0 3 0.3 0.16 6 0 0 6 4 6 6 4 4 33.64 55.64 44.34 1 1 2 Whitelist LUSC-US 0.93 0.36 0 0 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 9 0.03 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 5 49586709 108784645 1 2 165 1 1 0 0 0 0.57 0.04 1 0.18 0 NA NA NA NA NA NA 33.64 0 99.88 1 2 NA Whitelist LUSC-US 0.68 0.13 0.18 0 0.64 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 6 162737314 162760299 1 1 165 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 33.64 0 99.83 0 2 NA Whitelist LUSC-US 0.62 0.08 NA NA 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 7 3372091 146924363 1 8 165 3 0 0 1 4 0.11 0.86 7 0 0 7 5 7 8 6 6 33.64 24.72 75.06 0 1 2 Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 12 0.04 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 8 3274119 129654230 1 3 165 1 2 0 0 0 0.3 0.05 10 0.04 0.03 10 6 10 10 6 10 33.64 20.38 79.61 0 2 1 Whitelist LUSC-US 0.62 0.17 0.04 0.03 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 9 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 10 43498974 43646007 1 1 165 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA 7 3 5 33.64 53.98 42.37 0 3 NA Whitelist LUSC-US 0.62 0.5 NA NA 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 11 26775374 27143309 1 1 165 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 3 3 33.64 0.87 98.7 0 1 2 Whitelist LUSC-US 0.62 0.26 NA NA 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 12 112334454 112376965 1 1 165 0 1 0 0 0 0.39 0.46 1 0 NA NA NA NA NA NA NA 33.64 0 99.98 0 2 NA Whitelist LUSC-US 0.62 0.7 0 NA 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 13 26043846 102862285 1 4 165 2 0 0 0 2 0.11 0.67 3 0 0 NA NA NA NA NA NA 33.64 0.07 99.93 0 2 1 Whitelist LUSC-US 0.68 0.87 0 0 0.48 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 14 NA NA 0 0 165 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.21 NA NA NA 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 15 26532916 71648634 1 3 165 0 0 2 0 1 0.11 1 3 0 0 NA NA NA NA NA NA 33.64 0.1 99.77 0 2 3 Whitelist LUSC-US 0.62 1 0 0 0.48 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 16 81457961 89793192 9 13 165 3 4 0 2 4 0.27 0 8 0 0 8 5 7 12 5 7 33.64 1.82 97.46 2 2 3 Whitelist LUSC-US 0.62 0 0 0 0.59 0 Low confidence LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC Canonical without polyploidization 22 0.07 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 17 7565 30811752 1 3 165 2 0 0 0 1 0.11 0.81 4 0 0 4 0 3 4 0 0 33.64 0.59 94.97 0 2 5 Whitelist LUSC-US 0.62 0.95 0 0 0.48 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 5 0.02 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 18 NA NA 0 0 165 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.34 NA NA NA 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 19 57871721 59077171 3 5 165 2 0 0 1 2 0.3 0 4 0 0 4 4 4 16 5 5 33.64 64.23 28.42 0 2 3 Whitelist LUSC-US 1 0.93 0 0 0 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 20 14123916 62192537 1 9 165 3 0 0 1 5 0.11 0 7 0 0 7 3 5 8 3 5 33.64 16.75 75.42 0 2 3 Whitelist LUSC-US 0.68 0 0 0 0.48 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 13 0.04 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 21 NA NA 0 0 165 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.7 NA NA NA 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 22 NA NA 0 0 165 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::c2598334-f866-4cc3-93ec-2d2e8b85d319 X 154935401 154992063 1 2 165 0 0 1 0 1 0.39 0.15 1 NA NA NA NA NA NA NA NA 33.64 99.82 0 0 1 NA Whitelist LUSC-US 0.68 0.36 NA NA 0.59 0 No LUSC-US c2598334-f866-4cc3-93ec-2d2e8b85d319 LUSC 0.72 1.86 Lung-SCC NA 3 0.01 nonsynonymous_SNV,17_7579374_A_C,CN:2 2 LUSC-US DO27588 TCGA-77-6843 c2598334-f866-4cc3-93ec-2d2e8b85d319 male deceased C34.1 74 2224 NA NA Included Lung-SCC LUSC US 1 73.16 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 1 NA NA 0 0 213 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 0 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.01 0 NA NA 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 0 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 2 55665898 61639394 4 7 213 1 1 0 2 3 0.57 0 8 0 0 8 0 3 29 5 5 52.52 74 25.89 2 9 11 Whitelist LUSC-US 3 0.77 0 0 0 0.64 1 Linked to low confidence LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC With other complex events 11 0.03 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 3 145882159 191906843 65 73 213 16 10 23 16 8 0.16 0 88 0 0 88 5 14 93 6 15 52.52 52.5 44.36 0 7 5 Whitelist LUSC-US 0.54 0 0 0 0.59 1 Low confidence LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC With other complex events 138 0.32 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 4 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 0 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 5 44667882 141253260 1 6 213 1 3 0 0 2 0.11 0.09 3 0 0 NA NA NA 4 3 3 52.52 25.47 71.86 0 2 5 Whitelist LUSC-US 0.68 0.24 0 0 0.48 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 10 0.02 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 6 4722233 63460603 1 3 213 0 1 0 1 1 0.57 0.11 4 0 0.01 4 3 4 12 4 4 52.52 99.86 0 0 4 3 Whitelist LUSC-US 0.87 0.29 0 0.01 0.64 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 5 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 7 38412386 38669855 2 4 213 1 1 1 1 0 1 1 1 0 0 NA NA NA 7 3 3 52.52 97.33 0 0 5 NA Whitelist LUSC-US 1 1 0 0 1 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 8 0.02 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 8 39781450 50170905 1 3 213 1 0 0 0 2 0.39 0.03 1 NA 0 NA NA NA 5 3 3 52.52 96.13 3.76 0 3 NA Whitelist LUSC-US 0.87 0.11 NA 0 0.59 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 4 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 9 92070135 93412512 1 1 213 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 52.52 67.66 31.67 0 4 NA Whitelist LUSC-US 0.62 0.08 NA NA 0.59 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 2 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 10 18873038 26771364 1 4 213 3 0 0 0 1 0.03 0.25 6 0 0 6 6 6 8 8 8 52.52 27.9 68.69 0 2 3 Whitelist LUSC-US 0.21 0.49 0 0 0.33 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 7 0.02 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 11 5930461 26745578 1 2 213 0 2 0 0 0 0.11 1 3 0 0 NA NA NA 5 5 5 52.52 99.57 0 0 3 4 Whitelist LUSC-US 0.54 1 0 0 0.48 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 4 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 12 38084474 38940303 2 3 213 0 0 1 1 1 0.57 0.51 2 0 0 NA NA NA 8 3 3 52.52 99.92 0 5 9 11 Whitelist LUSC-US 0.62 0.76 0 0 0.64 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 5 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 13 63756400 64798270 1 4 213 0 0 1 1 2 0.57 1 2 0 0 NA NA NA 10 4 5 52.52 34.91 65.09 17 6 8 Whitelist LUSC-US 0.68 1 0 0 0.64 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 6 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 14 66751627 66806021 1 1 213 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 52.52 0.05 99.04 0 1 2 Whitelist LUSC-US 0.62 0.21 NA NA 0.59 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 2 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 15 NA NA 0 0 213 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.12 NA NA NA 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 0 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 16 10242622 10254913 1 1 213 0 1 0 0 0 0.39 0.67 1 NA NA NA NA NA 4 4 4 52.52 8.92 86.62 0 2 NA Whitelist LUSC-US 0.62 0.87 NA NA 0.59 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 2 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 17 20886354 68589820 1 5 213 0 3 0 1 1 0.11 0.83 9 0 0 9 5 7 12 5 7 52.52 72.34 23.22 0 4 6 Whitelist LUSC-US 0.62 0.97 0 0 0.48 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 9 0.02 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 18 19051875 37375431 1 4 213 0 1 1 1 1 0.8 1 4 0 0 4 3 4 4 3 3 52.52 47.83 52.13 0 3 2 Whitelist LUSC-US 0.68 1 0 0 0.84 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 7 0.02 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 19 5801908 24509732 14 14 213 3 3 5 3 0 0.84 0 27 0 0 27 11 18 33 11 11 52.52 30.8 61.62 0 2 4 Whitelist LUSC-US 0.9 0 0 0 0.88 1 High confidence LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC With other complex events 28 0.07 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 20 30559846 58972188 3 3 213 0 1 1 1 0 0.8 0.15 5 0 0 5 3 5 8 4 5 52.52 53.93 45.1 2 2 3 Whitelist LUSC-US 0.87 0.35 0 0 0.84 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 6 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 21 21740760 21754307 1 1 213 0 0 1 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 52.52 77.35 0 0 3 NA Whitelist LUSC-US 0.62 0.76 NA NA 0.59 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 2 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b 22 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 0 0 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::ce8612ab-3149-4a6a-b424-29c0c21c9b8b X 31934626 33779874 2 2 213 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 52.52 0 100 0 2 NA Whitelist LUSC-US 0.68 0.11 0 0 0.64 1 No LUSC-US ce8612ab-3149-4a6a-b424-29c0c21c9b8b LUSC 0.59 3.12 Lung-SCC NA 4 0.01 frameshift_deletion,17_7576904_-_G,CN:2 3 LUSC-US DO26596 TCGA-43-3394 ce8612ab-3149-4a6a-b424-29c0c21c9b8b male alive C34.3 52 NA 352 NA Included Lung-SCC LUSC US 0 11.58 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 1 91997031 211253218 1 6 96 2 0 1 1 2 0.57 0.85 4 0 0 4 0 3 4 0 3 24.53 96.3 0.72 0 1 2 Whitelist LUSC-US 0.68 0.98 0 0 0.64 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 10 0.05 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 2 64322052 64512778 1 1 96 0 0 1 0 0 0.39 0.06 2 0 NA NA NA NA 7 5 5 24.53 0.25 99.66 0 2 3 Whitelist LUSC-US 0.62 0.2 0 NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 3 102997353 197639661 39 47 96 8 11 9 11 8 0.88 0 56 0 0 56 7 7 57 8 8 24.53 79.66 20.1 0 1 2 Whitelist LUSC-US 0.92 0 0 0 0.91 1 High confidence LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC With other complex events 86 0.45 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 4 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 5 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 6 102878697 160105845 1 1 96 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 24.53 0 99.75 0 2 NA Whitelist LUSC-US 0.62 0.11 NA NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 7 54731666 54813537 3 3 96 0 0 2 1 0 0.3 0.04 6 0 0 6 0 3 14 3 4 24.53 7.73 89.72 1 3 8 Whitelist LUSC-US 0.62 0.13 0 0 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 6 0.03 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 8 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 9 NA NA 0 0 96 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.41 NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 10 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 11 NA NA 0 0 96 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 12 39146866 49512227 1 1 96 1 0 0 0 0 0.39 0.22 1 0 NA NA NA NA NA NA NA 24.53 0 99.92 0 2 NA Whitelist LUSC-US 0.62 0.45 0 NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 13 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 14 43610575 43639258 1 1 96 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 24.53 0 99.09 0 2 NA Whitelist LUSC-US 0.62 0.63 NA NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 16 785901 809001 1 1 96 0 0 1 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 24.53 0.8 99.1 0 2 3 Whitelist LUSC-US 0.62 0.76 NA NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 17 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 18 34650768 34799440 1 1 96 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 24.53 0 99.96 0 2 NA Whitelist LUSC-US 0.62 0.76 NA NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 19 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 21 42654228 42684628 1 1 96 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.53 0.06 77.29 0 0 2 Whitelist LUSC-US 0.62 1 NA NA 0.59 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::d4bc755a-2585-4529-ae36-7e1d88bdecfe X NA NA 0 0 96 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0 NA NA 1 No LUSC-US d4bc755a-2585-4529-ae36-7e1d88bdecfe LUSC 0.74 1.93 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577556_A_C,CN:2 2 LUSC-US DO26572 TCGA-18-3408 d4bc755a-2585-4529-ae36-7e1d88bdecfe female alive C34.3 77 NA 2099 NA Included Lung-SCC LUSC US 0 69.05 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 1 32904979 32982492 2 2 59 0 1 1 0 0 0.57 0.01 6 0 0 6 3 6 16 3 6 60.73 54.46 42.52 0 6 8 Whitelist LUSC-US 0.68 0.03 0 0 0.64 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 4 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 2 113866866 242358993 1 4 59 3 1 0 0 0 0.11 0.34 10 0 0 10 7 9 11 7 9 60.73 99.84 0.06 25 3 1 Whitelist LUSC-US 0.54 0.59 0 0 0.48 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 8 0.07 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 3 NA NA 0 0 59 0 0 0 0 0 NA 0.61 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.82 0 NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 4 53733249 54222829 1 1 59 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 60.73 0.26 99.51 2 1 2 Whitelist LUSC-US 0.62 0.95 NA NA 0.59 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 5 NA NA 0 0 59 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.4 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 6 NA NA 0 0 59 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.51 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 7 33414223 151264505 1 1 59 0 0 1 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 60.73 99.78 0 14 3 4 Whitelist LUSC-US 0.62 0.93 NA NA 0.59 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 8 112292304 112712921 1 3 59 0 1 1 0 1 0.57 0.54 2 0 0 NA NA NA 10 6 6 60.73 98.25 1.74 6 3 4 Whitelist LUSC-US 0.62 0.77 0 0 0.64 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 5 0.04 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 9 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 10 NA NA 0 0 59 0 0 0 0 0 NA 0.05 NA 0.24 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.17 0.24 NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 11 NA NA 0 0 59 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.92 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 12 NA NA 0 0 59 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 13 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 15 59495128 60625470 1 3 59 0 0 0 2 1 0.11 0.02 4 0 0 4 0 3 8 3 4 60.73 41.72 58.18 1 2 3 Whitelist LUSC-US 0.62 0.09 0 0 0.48 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 5 0.04 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 16 53174834 53237675 1 1 59 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA 7 4 4 60.73 99.43 0.07 2 2 3 Whitelist LUSC-US 0.62 0.44 NA NA 0.59 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 17 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 19 47345189 47492154 1 1 59 1 0 0 0 0 0.39 0.11 2 NA NA NA NA NA 6 3 4 60.73 99.83 0 4 3 5 Whitelist LUSC-US 0.62 0.29 NA NA 0.59 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 20 35016297 49531975 2 2 59 0 1 1 0 0 0.57 0.13 3 0 0 NA NA NA 6 4 4 60.73 59.01 40.02 1 7 2 Whitelist LUSC-US 0.68 0.33 0 0 0.64 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 4 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 21 41448669 41468195 1 1 59 0 0 0 1 0 0.39 0.52 2 NA NA NA NA NA 5 0 3 60.73 34.27 35.75 0 6 8 Whitelist LUSC-US 0.62 0.76 NA NA 0.59 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea 22 NA NA 0 0 59 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.75 NA NA NA 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da61857a-b00e-4a19-ab02-8fbb2ee56bea X 34516828 143114558 1 4 59 0 1 0 1 2 0.57 0 4 0 0 4 3 4 8 3 3 60.73 99.77 0 23 3 4 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US da61857a-b00e-4a19-ab02-8fbb2ee56bea LUSC 0.84 2.95 Lung-SCC NA 6 0.05 nonsynonymous_SNV,17_7577141_A_C,CN:2 3 LUSC-US DO27081 TCGA-34-2600 da61857a-b00e-4a19-ab02-8fbb2ee56bea female deceased C34.3 76 1874 NA NA Included Lung-SCC LUSC US 1 61.64 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 1 209951800 219107435 3 4 177 0 0 2 1 1 0.3 0 10 0 0 10 5 9 28 5 5 42.03 90.03 9.97 0 4 1 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 2 59209849 61520164 7 8 177 2 1 1 3 1 0.67 0 11 0 0 11 3 4 30 5 5 42.03 27.25 72.66 2 11 12 Whitelist LUSC-US 0.62 0 0 0 0.74 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 15 0.04 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 3 47781778 185705702 1 9 177 0 4 0 0 5 0.01 0.46 9 0 0 9 6 6 10 6 6 42.03 96.64 0.2 0 5 6 Whitelist LUSC-US 0.62 0.7 0 0 0.16 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 13 0.04 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 4 NA NA 0 0 177 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.06 NA NA NA 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 5 5872167 45145134 1 6 177 0 1 1 2 2 0.57 0.64 8 0 0 8 4 6 9 4 7 42.03 5.95 93.93 1 2 4 Whitelist LUSC-US 3 0.68 0.85 0 0 0.64 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 10 0.03 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 6 46682549 49190801 3 3 177 0 1 1 1 0 0.8 1 2 0 0 NA NA NA 9 3 6 42.03 71.31 28.55 0 2 4 Whitelist LUSC-US 0.87 1 0 0 0.84 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 7 65826751 105268441 6 6 177 1 2 2 1 0 0.88 0.02 6 0 0 6 3 3 8 3 3 42.03 1.62 98.16 0 2 3 Whitelist LUSC-US 0.93 0.08 0 0 0.91 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 12 0.03 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 8 102316558 102496344 1 1 177 0 1 0 0 0 0.39 0.61 1 0 NA NA NA NA 6 4 4 42.03 28.58 71.31 0 2 NA Whitelist LUSC-US 0.62 0.82 0 NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 9 21919305 21965594 1 1 177 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 8 3 4 42.03 31.84 67.46 0 2 3 Whitelist LUSC-US 0.62 0.17 NA NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 10 2701588 79292013 1 3 177 1 2 0 0 0 0.3 0.37 6 0 0 6 5 6 7 5 5 42.03 0.33 99.55 0 2 3 Whitelist LUSC-US 0.62 0.62 0 0 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 11 3945239 55719857 1 2 177 2 0 0 0 0 0.11 0.59 4 0 0 4 4 4 5 5 5 42.03 0.08 96.46 2 1 2 Whitelist LUSC-US 0.54 0.81 0 0 0.48 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 12 63043726 63090477 1 1 177 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 42.03 0.03 99.88 0 2 3 Whitelist LUSC-US 0.62 0.02 NA NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 13 93126527 93375926 1 1 177 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 5 5 42.03 0.71 85.13 0 1 2 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 14 NA NA 0 0 177 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.63 NA NA NA 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 15 25374726 43447428 2 2 177 1 0 1 0 0 0.57 0 6 0 0 6 0 4 15 3 5 42.03 21.89 62.61 0 1 2 Whitelist LUSC-US 0.68 0.01 0 0 0.64 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 16 3024467 3134062 1 1 177 0 1 0 0 0 0.39 1 2 0.01 NA NA NA NA NA NA NA 42.03 0.12 99.79 0 2 3 Whitelist LUSC-US 0.62 1 0.01 NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 17 3569016 80696192 1 5 177 0 3 0 0 2 0.03 0.03 11 0 0 11 5 5 12 5 5 42.03 94.47 0.19 5 4 3 Whitelist LUSC-US 0.45 0.11 0 0 0.33 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 18 70921065 70931552 1 1 177 0 0 0 1 0 0.39 0.34 1 NA NA NA NA NA 4 3 3 42.03 76.09 23.88 0 3 NA Whitelist LUSC-US 0.62 0.59 NA NA 0.59 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 19 1370925 58004231 1 12 177 1 3 1 1 6 0.57 0 18 0 0 18 7 11 20 7 8 42.03 48.55 44.12 2 2 1 Whitelist LUSC-US 0.83 0 0 0 0.64 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 18 0.05 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 20 NA NA 0 0 177 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 21 NA NA 0 0 177 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 22 19531192 41789810 1 2 177 0 2 0 0 0 0.11 0.16 3 0 0 NA NA NA 4 4 4 42.03 46.96 53.04 0 2 1 Whitelist LUSC-US 0.54 0.37 0 0 0.48 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::da93a143-5799-4856-a5f4-3ff3b9284311 X 142051563 151981489 1 2 177 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 42.03 99.33 0.67 1 1 2 Whitelist LUSC-US 0.54 0.04 NA 0 0.48 0 No LUSC-US da93a143-5799-4856-a5f4-3ff3b9284311 LUSC 0.63 1.97 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578457_A_C,CN:1 2 LUSC-US DO26710 TCGA-66-2795 da93a143-5799-4856-a5f4-3ff3b9284311 male alive C34.1 68 NA 122 NA Included Lung-SCC LUSC US 0 4.01 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 1 192371614 239012297 1 2 168 2 0 0 0 0 0.11 0 4 NA 0 4 3 4 6 4 6 57.19 41.82 58.17 0 4 2 Whitelist LUSC-US 0.54 0 NA 0 0.48 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 2 125700040 125871998 3 3 168 1 2 0 0 0 0.3 0.17 5 0 0 5 0 3 33 3 5 57.19 41.44 55.86 0 14 25 Whitelist LUSC-US 0.62 0.38 0 0 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 3 23422685 189113654 1 8 168 2 4 0 1 1 0.17 0.54 13 0 0 13 4 5 14 4 6 57.19 52.91 43.89 0 3 6 Whitelist LUSC-US 0.62 0.77 0 0 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 15 0.04 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 4 58690362 58716072 1 11 168 0 1 0 0 10 0.39 0.01 5 0 0 5 3 4 8 3 3 57.19 32.51 67.38 1 2 8 Whitelist LUSC-US 0.87 0.05 0 0 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 12 0.04 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 5 NA NA 0 0 168 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.13 NA NA NA 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 6 56875241 62704227 34 35 168 8 13 7 6 1 0.33 0 11 0 0 11 3 11 31 4 12 57.19 95.79 1.28 0 4 5 Whitelist LUSC-US 0.66 0 0 0 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 69 0.21 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 7 55042072 133902406 1 2 168 0 2 0 0 0 0.11 0.01 7 NA 0 7 3 4 8 3 3 57.19 95.51 1.94 0 3 4 Whitelist LUSC-US 0.54 0.04 NA 0 0.48 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 8 3060501 131483383 1 4 168 2 1 0 0 1 0.3 0.29 9 0.01 0.11 9 4 4 11 5 5 57.19 62.47 34.11 0 2 3 Whitelist LUSC-US 0.68 0.53 0.01 0.11 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 7 0.02 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 9 35859861 35947007 1 1 168 0 1 0 0 0 0.39 0.42 2 0 NA NA NA NA 8 0 3 57.19 96.92 0 0 12 20 Whitelist LUSC-US 0.62 0.67 0 NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 10 18855134 18961203 1 1 168 0 0 1 0 0 0.39 0.09 2 NA NA NA NA NA 7 0 3 57.19 13.91 85.9 0 2 3 Whitelist LUSC-US 0.62 0.26 NA NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 11 47997948 107859873 4 18 168 2 0 2 0 14 0.26 0 24 0 0 24 3 3 29 3 5 57.19 67.57 28.97 10 6 8 Whitelist LUSC-US 0.23 0 0 0 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 22 0.07 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 12 104586649 104716196 1 1 168 0 0 0 1 0 0.39 0.2 1 0 NA NA NA NA 5 0 5 57.19 99.98 0 0 3 NA Whitelist LUSC-US 0.62 0.42 0 NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 13 36219925 74045506 1 4 168 1 1 0 0 2 0.57 0.67 4 0 0 4 3 4 5 3 3 57.19 0.27 85.57 0 2 1 Whitelist LUSC-US 0.68 0.87 0 0 0.64 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 6 0.02 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 14 23984285 29241295 3 14 168 1 1 1 0 11 0.8 0 2 0 0 NA NA NA 14 3 3 57.19 82.85 1.24 1 19 20 Whitelist LUSC-US 0.62 0 0 0 0.84 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 17 0.05 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 15 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 16 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 17 59964632 60932219 1 1 168 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 57.19 99.98 0 0 3 5 Whitelist LUSC-US 0.62 0.59 NA NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 18 44781270 44819381 1 1 168 0 0 1 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 57.19 57.32 42.64 0 2 NA Whitelist LUSC-US 0.62 0.59 NA NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 19 38418151 40259207 1 2 168 0 2 0 0 0 0.11 0.78 4 NA 0 4 3 4 6 3 3 57.19 99.83 0 0 5 3 Whitelist LUSC-US 0.54 0.93 NA 0 0.48 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 20 15011072 15104472 1 2 168 1 0 0 0 1 0.39 0.59 3 NA NA NA NA NA 4 4 4 57.19 99.03 0 0 4 3 Whitelist LUSC-US 0.68 0.81 NA NA 0.59 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 3 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 21 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 22 NA NA 0 0 168 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::dc6ceece-efaa-4b9d-9e12-d35863d7a902 X 136810481 137236035 2 3 168 1 0 0 1 1 0.57 0.86 1 0 0 NA NA NA NA NA NA 57.19 100 0 0 1 NA Whitelist LUSC-US 0.87 0.99 0 0 0.64 0 No LUSC-US dc6ceece-efaa-4b9d-9e12-d35863d7a902 LUSC 0.32 3.07 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:3 3 LUSC-US DO26957 TCGA-92-8064 dc6ceece-efaa-4b9d-9e12-d35863d7a902 male alive C34.1 58 NA 160 NA Included Lung-SCC LUSC US 0 5.26 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 1 12187240 182422202 1 5 325 3 1 0 1 0 0.28 0.68 12 0 0 12 7 12 15 7 7 34.22 12.17 87.83 7 2 1 Whitelist LUSC-US 0.62 0.88 0 0 0.59 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 10 0.02 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 2 80709485 82580998 4 4 325 1 1 2 0 0 0.57 1 1 0 0 NA NA NA 11 11 11 34.22 13.72 86.19 0 2 NA Whitelist LUSC-US 0.68 1 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 3 106741305 184052892 1 10 325 0 1 0 1 8 0.57 0.83 5 0 0 5 0 5 6 0 0 34.22 96.83 0 1 3 4 Whitelist LUSC-US 10 0.62 0.97 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 4 59035924 59129693 1 1 325 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA 5 5 5 34.22 62.73 34.9 0 1 2 Whitelist LUSC-US 0.62 0.18 0 NA 0.59 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 5 22943219 52239003 2 4 325 0 1 1 0 2 0.57 0.73 7 0 0 7 3 5 18 5 7 34.22 92.55 4.78 4 5 1 Whitelist LUSC-US 0.54 0.91 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 6 14998667 133000620 1 5 325 1 0 1 0 3 0.57 0.41 14 0 0 14 6 11 17 6 6 34.22 16.28 83.59 3 1 2 Whitelist LUSC-US 0.68 0.66 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 7 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 7 37070337 127365562 1 4 325 2 0 0 0 2 0.11 0.32 6 0 0 6 6 6 14 13 13 34.22 14.93 84.84 3 1 2 Whitelist LUSC-US 0.54 0.58 0 0 0.48 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 8 NA NA 0 0 325 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.32 0 NA NA 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 9 84471182 105374092 1 2 325 2 0 0 0 0 0.11 0.06 3 0 0 NA NA NA 9 6 6 34.22 63.74 36.11 0 1 0 Whitelist LUSC-US 0.54 0.19 0 0 0.48 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 10 90165117 106378704 1 4 325 3 1 0 0 0 0.11 0.29 7 0 0 7 5 7 12 5 5 34.22 12.27 87.59 2 2 1 Whitelist LUSC-US 0.54 0.53 0 0 0.48 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 11 134473018 134716053 2 3 325 1 0 0 1 1 0.57 0.02 4 0 0 4 3 4 23 4 5 34.22 38.01 61.79 4 2 1 Whitelist LUSC-US 0.87 0.1 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 12 77904568 78132916 2 3 325 2 0 0 0 1 0.11 0.01 2 0 0 NA NA NA 12 4 7 34.22 44.19 55.63 1 1 2 Whitelist LUSC-US 0.41 0.03 0 0 0.48 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 5 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 13 89065420 96844589 2 2 325 0 1 0 1 0 0.57 0 6 0 0 6 3 6 24 4 4 34.22 32.23 67.68 0 4 5 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 14 26986578 38105768 2 2 325 1 1 0 0 0 0.57 0 8 0 0 8 3 4 18 5 5 34.22 33.48 50.61 0 4 8 Whitelist LUSC-US 0.68 0.01 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 15 98170187 99717079 2 10 325 0 0 1 1 8 0.57 0.02 10 0 0 10 10 10 13 13 13 34.22 1.77 98.23 0 1 2 Whitelist LUSC-US 20 0.62 0.07 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 12 0.02 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 16 20469809 20551516 1 1 325 1 0 0 0 0 0.39 0.73 2 0 NA NA NA NA 8 6 6 34.22 11.95 87.95 1 1 2 Whitelist LUSC-US 0.62 0.91 0 NA 0.59 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 17 80189500 80520152 2 2 325 0 0 1 1 0 0.57 0.49 1 0 0 NA NA NA 4 3 3 34.22 27.34 67.39 0 2 NA Whitelist LUSC-US 0.68 0.74 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 18 NA NA 0 0 325 0 0 0 0 0 NA 0.49 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.73 0 NA NA 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 19 8280353 9884286 1 2 325 2 0 0 0 0 0.11 0 4 0 0 4 4 4 5 5 5 34.22 0.18 99.65 0 1 2 Whitelist LUSC-US 0.54 0 0 0 0.48 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 20 5505009 12951663 2 9 325 0 0 1 1 7 0.57 0 11 0 0 11 6 11 17 6 6 34.22 15.07 84.03 0 3 2 Whitelist LUSC-US 15 0.62 0 0 0 0.64 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 11 0.02 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 21 NA NA 0 0 325 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 1 0 NA NA 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 22 36168483 36184624 1 1 325 0 1 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 34.22 0 100 0 2 NA Whitelist LUSC-US 0.62 0.54 0 NA 0.59 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e21964b8-47c7-4a5f-bfa7-7206222883d2 X 29554261 53122040 4 4 325 0 0 2 2 0 0.26 0.61 1 0 0 NA NA NA 7 5 5 34.22 7.36 89.25 1 2 NA Whitelist LUSC-US 0.62 0.83 0 0 0.59 0 No LUSC-US e21964b8-47c7-4a5f-bfa7-7206222883d2 LUSC 0.48 1.96 Lung-SCC NA 8 0.01 nonsynonymous_SNV,17_7578265_C_A,CN:1 2 LUSC-US DO27120 TCGA-21-5782 e21964b8-47c7-4a5f-bfa7-7206222883d2 female deceased C34.3 68 962 NA NA Included Lung-SCC LUSC US 1 31.64 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 1 37159595 40168195 5 12 127 1 2 0 2 7 0.53 0 15 0 0 15 3 7 37 4 4 47.29 48.14 51.85 6 12 3 Whitelist LUSC-US 3 0.68 0 0 0 0.64 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 17 0.07 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 2 47707919 218896058 1 8 127 1 1 1 0 5 0.8 0.63 7 0 0 7 5 7 9 5 5 47.29 50.65 49.25 2 2 1 Whitelist LUSC-US 3 0.87 0.84 0 0 0.84 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 11 0.04 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 3 71352000 183485134 1 18 127 3 1 2 1 11 0.67 0 29 0 0 29 5 5 36 5 5 47.29 91.34 5.58 3 3 15 Whitelist LUSC-US 0.87 0 0 0 0.74 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 25 0.1 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 4 57081771 136525208 1 3 127 0 0 2 0 1 0.11 0.72 3 0 0 NA NA NA 6 3 3 47.29 89.77 10.12 0 1 2 Whitelist LUSC-US 0.62 0.9 0 0 0.48 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 5 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 5 32313713 32351155 1 1 127 0 1 0 0 0 0.39 0.36 2 0 NA NA NA NA 4 3 3 47.29 97.32 0 0 3 4 Whitelist LUSC-US 0.62 0.61 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 6 134531981 134977077 1 1 127 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 6 6 47.29 0.36 99.5 0 1 2 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 7 70090216 104716160 1 2 127 2 0 0 0 0 0.11 0.84 4 0 0 4 3 4 10 3 6 47.29 36.56 63.21 0 2 0 Whitelist LUSC-US 0.54 0.98 0 0 0.48 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 8 17537755 141687065 1 4 127 1 1 0 0 2 0.57 0.69 7 0 0 7 4 7 8 4 4 47.29 31.63 64.94 1 2 1 Whitelist LUSC-US 0.68 0.89 0 0 0.64 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 6 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 9 15686747 116337130 1 3 127 1 1 0 0 1 0.57 0.82 6 0 0 6 6 6 6 6 6 47.29 31.08 65.84 1 1 2 Whitelist LUSC-US 0.62 0.96 0 0 0.64 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 5 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 10 89433972 89694980 1 1 127 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 10 3 4 47.29 51.05 48.77 0 0 1 Whitelist LUSC-US 0.62 0.97 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 11 NA NA 0 0 127 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.33 NA NA NA 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 0 0 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 12 98937399 98975380 1 2 127 2 0 0 0 0 0.11 0.29 2 NA 0 NA NA NA 6 6 6 47.29 0.84 99.08 0 1 2 Whitelist LUSC-US 0.54 0.54 NA 0 0.48 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 13 69036032 69505345 1 3 127 0 1 0 0 2 0.39 0.46 4 0 0 4 4 4 7 7 7 47.29 75.61 24.39 0 1 2 Whitelist LUSC-US 0.62 0.7 0 0 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 4 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 14 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 0 0 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 15 52496225 52736280 1 1 127 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 47.29 0.23 99.64 0 1 2 Whitelist LUSC-US 0.62 0.51 NA NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 16 25170068 89485821 1 4 127 1 1 1 0 1 0.8 0.4 6 0 0 6 4 6 7 5 5 47.29 61.76 32.29 6 2 3 Whitelist LUSC-US 1 0.64 0 0 0.84 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 7 0.03 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 17 29253692 60002673 1 3 127 2 0 0 0 1 0.11 1 4 NA 0 4 4 4 4 4 4 47.29 54.12 45.86 0 1 2 Whitelist LUSC-US 0.62 1 NA 0 0.48 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 5 0.02 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 18 20901923 20912218 1 1 127 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA NA NA NA 47.29 0 99.96 0 2 NA Whitelist LUSC-US 0.62 0.37 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 19 2069827 41706149 1 6 127 2 2 0 0 2 0.26 0.01 6 0 0 6 5 6 7 5 5 47.29 0.34 99.49 3 2 3 Whitelist LUSC-US 0.54 0.06 0 0 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 10 0.04 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 20 37426527 37487316 1 2 127 0 0 0 1 1 0.39 0.2 1 0 NA NA NA NA NA NA NA 47.29 1.16 97.85 0 2 NA Whitelist LUSC-US 0.68 0.43 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 3 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 21 NA NA 0 0 127 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.08 0 NA NA 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 0 0 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 22 43206381 43278693 1 1 127 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA 4 4 4 47.29 14.52 83.8 0 3 NA Whitelist LUSC-US 0.62 0.08 0 NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e58e8850-154f-4695-bee0-005c76410327 X 137864627 137900181 1 1 127 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 47.29 100 0 0 1 NA Whitelist LUSC-US 0.62 0.26 NA NA 0.59 0 No LUSC-US e58e8850-154f-4695-bee0-005c76410327 LUSC 0.63 1.72 Lung-SCC NA 2 0.01 NA 2 LUSC-US DO26476 TCGA-60-2713 e58e8850-154f-4695-bee0-005c76410327 male alive C34.3 64 NA 1456 NA Included Lung-SCC LUSC US 0 47.89 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 1 231165098 234014740 2 2 265 0 0 1 1 0 0.57 0.17 3 0 0 NA NA NA 27 7 9 65.42 99.87 0.13 0 4 5 Whitelist LUSC-US 0.68 0.38 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 2 4272421 214418497 2 13 265 0 2 1 1 9 0.57 0.27 14 0 0 14 3 5 16 4 5 65.42 86.14 11.15 40 3 4 Whitelist LUSC-US 0.99 0.51 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 17 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 3 77329734 86876662 2 2 265 1 1 0 0 0 0.57 0.72 5 0 0 5 3 5 27 4 9 65.42 63.21 33.63 16 2 5 Whitelist LUSC-US 0.68 0.9 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 4 19335711 92885135 1 2 265 1 1 0 0 0 0.57 0.06 3 0 0 NA NA NA 8 4 4 65.42 72.43 25.09 1 1 2 Whitelist LUSC-US 0.68 0.2 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 5 22545801 109800800 1 4 265 1 1 0 0 2 0.57 0.1 4 0 0 4 3 4 4 3 3 65.42 25.54 71.75 5 2 3 Whitelist LUSC-US 0.68 0.26 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 6 62569792 169514744 48 52 265 12 17 10 9 4 0.37 0 78 0 0 78 4 8 83 4 8 65.42 96.96 0.2 16 5 7 Whitelist LUSC-US 0.63 0 0 0 0.59 0 Low confidence LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC With other complex events 100 0.19 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 7 41985061 124636563 1 4 265 1 1 0 0 2 0.57 0.68 5 0 0 5 4 5 6 4 6 65.42 97.33 0.12 10 3 4 Whitelist LUSC-US 0.68 0.88 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 8 34734189 85276732 2 8 265 1 1 0 0 6 0.57 0.02 21 0 0 21 4 5 28 4 5 65.42 96.58 0 8 13 1 Whitelist LUSC-US 0.87 0.07 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 10 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 9 5548472 10451076 2 2 265 1 1 0 0 0 0.57 0 8 0 0 8 3 4 26 3 4 65.42 87 12.29 0 2 1 Whitelist LUSC-US 0.68 0 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 10 1707319 54655499 1 4 265 0 1 0 1 2 0.57 0.14 8 0 0 8 3 5 13 3 3 65.42 5.32 94.49 7 2 3 Whitelist LUSC-US 0.68 0.34 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 11 63256546 132555341 1 6 265 0 1 1 0 4 0.57 0.46 7 0 0 7 3 4 11 3 4 65.42 57.76 38.24 10 1 2 Whitelist LUSC-US 0.54 0.71 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 8 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 12 90771916 91216035 2 2 265 0 2 0 0 0 0.11 0.88 2 0 0 NA NA NA 11 3 5 65.42 92.7 7.21 1 4 6 Whitelist LUSC-US 0.54 1 0 0 0.48 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 13 23901531 34858033 3 3 265 0 1 1 1 0 0.8 0.61 6 0 0 6 6 6 11 7 7 65.42 91.26 8.74 0 1 2 Whitelist LUSC-US 0.87 0.83 0 0 0.84 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 14 25858865 30113569 6 8 265 0 1 3 2 2 0.34 0.11 16 0 0 16 3 7 17 3 4 65.42 42.89 56.19 0 2 4 Whitelist LUSC-US 0.62 0.28 0 0 0.59 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 14 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 15 37426195 37464711 2 2 265 0 0 1 1 0 0.57 0.13 2 0 0 NA NA NA NA NA NA 65.42 99.91 0 0 3 4 Whitelist LUSC-US 0.68 0.32 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 16 15833633 16177529 1 1 265 0 1 0 0 0 0.39 0.7 2 0.04 NA NA NA NA 6 5 5 65.42 37.73 57.28 0 3 4 Whitelist LUSC-US 0.62 0.9 0.04 NA 0.59 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 17 NA NA 0 0 265 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.32 NA NA NA 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 18 9539011 49928659 1 8 265 0 2 2 1 3 0.53 0.13 10 0 0 10 3 5 12 3 5 65.42 95.33 0.02 5 5 4 Whitelist LUSC-US 0.62 0.32 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 13 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 19 30416774 46737566 4 16 265 1 1 2 0 12 0.57 0 33 0 0 33 3 4 37 3 4 65.42 29.29 63.22 7 4 5 Whitelist LUSC-US 13 0.79 0 0 0 0.64 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 20 0.04 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 20 335795 33038244 1 3 265 0 0 1 0 2 0.39 1 4 0 0 4 3 4 6 4 4 65.42 85.85 13.16 2 4 3 Whitelist LUSC-US 0.87 1 0 0 0.59 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 21 NA NA 0 0 265 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 22 46892663 46967413 1 1 265 0 1 0 0 0 0.39 0.78 3 NA 0 NA NA NA NA NA NA 65.42 0.15 99.85 0 2 3 Whitelist LUSC-US 0.62 0.93 NA 0 0.59 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 2 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e6b72c24-1607-43b9-8b8a-7bf83eea5895 X 97911434 148359552 1 3 265 2 1 0 0 0 0.3 0.16 6 0 0 6 6 6 7 7 7 65.42 0.42 99.58 0 1 2 Whitelist LUSC-US 0.62 0.37 0 0 0.59 0 No LUSC-US e6b72c24-1607-43b9-8b8a-7bf83eea5895 LUSC 0.53 3.12 Lung-SCC NA 6 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 3 LUSC-US DO27326 TCGA-66-2759 e6b72c24-1607-43b9-8b8a-7bf83eea5895 male alive C34.3 66 NA 762 NA Included Lung-SCC LUSC US 0 25.07 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 1 1462245 2781141 1 1 51 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 47.48 99.47 0.53 0 2 3 Whitelist LUSC-US 0.62 1 0 NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 2 95583486 209385856 1 3 51 1 0 1 0 1 0.57 0.32 2 0 0 NA NA NA 4 3 3 47.48 86.09 13.8 2 2 3 Whitelist LUSC-US 0.87 0.57 0 0 0.64 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 5 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 3 127595342 128033279 2 2 51 1 1 0 0 0 0.57 0.09 2 0 0 NA NA NA 10 4 4 47.48 57.93 38.9 0 6 8 Whitelist LUSC-US 0.68 0.25 0 0 0.64 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 4 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 4 NA NA 0 0 51 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.81 NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 5 39335880 39388427 1 1 51 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 3 47.48 25.47 71.87 0 4 6 Whitelist LUSC-US 0.62 0.63 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 6 155468082 155480829 1 1 51 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 47.48 0 99.86 0 2 NA Whitelist LUSC-US 0.62 0.62 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 7 6435358 6698130 1 1 51 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 47.48 99.78 0 0 3 NA Whitelist LUSC-US 0.62 0.76 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 9 18971474 100924405 1 2 51 1 1 0 0 0 0.57 1 9 NA 0 9 3 4 11 5 5 47.48 49.89 49.43 4 5 2 Whitelist LUSC-US 0.68 1 NA 0 0.64 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 4 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 10 9192664 9219131 1 1 51 0 0 1 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 47.48 0.02 99.8 0 2 3 Whitelist LUSC-US 0.62 0.91 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 11 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 12 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 14 102473963 105930239 1 2 51 0 2 0 0 0 0.11 0.68 1 NA 0 NA NA NA NA NA NA 47.48 0 99.09 0 2 NA Whitelist LUSC-US 0.54 0.88 NA 0 0.48 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 4 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 15 25631408 25688852 1 1 51 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 47.48 99.9 0 0 4 5 Whitelist LUSC-US 0.62 1 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 16 89192933 89260115 3 3 51 2 1 0 0 0 0.3 0 2 0 0 NA NA NA 10 4 10 47.48 55.97 43.94 0 2 4 Whitelist LUSC-US 0.62 0 0 0 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 6 0.06 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 17 27339700 31342272 1 3 51 0 0 2 1 0 0.3 0.05 4 0 0 4 3 4 11 4 5 47.48 51.59 43.96 0 3 2 Whitelist LUSC-US 0.62 0.16 0 0 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 6 0.06 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 18 24508445 27386245 1 1 51 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA 8 5 5 47.48 26.18 69.2 1 2 4 Whitelist LUSC-US 0.62 0.36 NA NA 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 19 3216381 39283417 1 3 51 1 1 0 1 0 0.8 0.08 4 0.03 0 4 3 4 5 3 3 47.48 99.75 0.08 2 4 2 Whitelist LUSC-US 0.87 0.23 0.03 0 0.84 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 6 0.06 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 21 NA NA 0 0 51 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.71 NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 X 110200368 126670060 3 5 51 1 2 0 0 2 0.3 0 7 0 0 7 7 7 9 8 8 47.48 99.17 0.01 2 3 4 Whitelist LUSC-US 0.62 0.02 0 0 0.59 0 No LUSC-US e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 LUSC 0.68 2.92 Lung-SCC NA 8 0.08 nonsynonymous_SNV,17_7577548_T_C,CN:2 2 LUSC-US DO26563 TCGA-34-5240 e7d1b042-5b1c-4c29-b501-a5ef4810ecd2 female alive C34.1 73 NA 235 NA Included Lung-SCC LUSC US 0 7.73 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 1 NA NA 0 0 86 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA 6 4 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.89 0 NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 2 47067934 139748399 2 7 86 1 2 0 1 3 0.57 0 31 0 0 31 3 7 39 3 4 59.7 99.47 0.43 2 8 4 Whitelist LUSC-US 0.96 0 0 0 0.64 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 11 0.06 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 3 NA NA 0 0 86 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.53 NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 4 25132881 25175892 1 1 86 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 59.7 0.02 99.87 0 0 2 Whitelist LUSC-US 0.62 0.32 NA NA 0.59 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 2 0.01 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 5 176445942 178840483 2 2 86 0 0 1 1 0 0.57 1 4 0.03 0 4 3 4 8 3 5 59.7 25.61 71.71 0 2 0 Whitelist LUSC-US 0.68 1 0.03 0 0.64 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 4 0.02 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 6 85414844 162752309 1 2 86 2 0 0 0 0 0.11 0.82 5 0 0 5 3 5 6 3 5 59.7 99.71 0.12 3 3 1 Whitelist LUSC-US 0.54 0.96 0 0 0.48 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 4 0.02 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 7 NA NA 0 0 86 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist LUSC-US NA 0.58 NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 8 38838106 38910925 2 2 86 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 11 3 4 59.7 75.44 24.56 5 6 7 Whitelist LUSC-US 0.68 0.02 0 0 0.64 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 4 0.02 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 9 36973687 38441105 2 2 86 1 1 0 0 0 0.57 0.15 4 0 0 4 4 4 9 5 7 59.7 96.89 0 0 3 5 Whitelist LUSC-US 0.68 0.36 0 0 0.64 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 4 0.02 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 10 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 11 NA NA 0 0 86 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist LUSC-US NA 0.95 NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 12 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 13 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 14 103963544 104503256 1 1 86 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA NA NA NA 59.7 0.5 98.58 0 1 2 Whitelist LUSC-US 0.62 0.92 NA NA 0.59 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 2 0.01 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 15 NA NA 0 0 86 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.76 NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 16 6439910 28151068 1 7 86 5 0 0 0 2 0 0 12 0 0 12 4 10 14 4 4 59.7 76.64 23.24 0 1 2 Whitelist LUSC-US 0.47 0 0 0 0.07 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 12 0.07 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 17 NA NA 0 0 86 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 0.11 0 NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 18 NA NA 0 0 86 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA 1 NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 19 50717239 50774055 1 1 86 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 4 3 3 59.7 99.41 0.1 0 2 3 Whitelist LUSC-US 0.62 0.48 NA NA 0.59 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 2 0.01 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 20 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 21 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 22 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist LUSC-US NA NA NA NA NA 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 0 0 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::ee850103-6314-41a3-9734-8b520de95b40 X 1764646 29093564 1 1 86 0 0 0 1 0 0.39 0.21 5 0.01 0.04 5 3 5 6 3 6 59.7 2.9 97.1 0 1 2 Whitelist LUSC-US 0.62 0.44 0.01 0.04 0.59 0 No LUSC-US ee850103-6314-41a3-9734-8b520de95b40 LUSC 0.74 2.96 Lung-SCC NA 2 0.01 stopgain,17_7579575_A_G,CN:2 3 LUSC-US DO27636 TCGA-77-7139 ee850103-6314-41a3-9734-8b520de95b40 male alive C34.3 56 NA 2737 NA Included Lung-SCC LUSC US 0 90.03 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 1 157668565 237364835 5 11 273 2 2 1 0 6 0.53 0.01 21 0 0 21 6 8 33 6 8 52.7 46.64 50.39 93 4 3 Whitelist LUSC-US 3 0.98 0.06 0 0 0.64 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 16 0.03 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 2 141448132 142528383 2 2 273 2 0 0 0 0 0.11 1 5 0 0 5 3 5 31 9 9 52.7 96.68 0.63 31 1 2 Whitelist LUSC-US 0.54 1 0 0 0.48 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 4 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 3 50622945 189897299 1 13 273 6 1 1 0 5 0.01 0.12 28 0 0 28 5 11 29 5 5 52.7 52.91 43.59 128 7 2 Whitelist LUSC-US 1 0.54 0.31 0 0 0.21 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 21 0.04 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 4 21261215 91243140 6 9 273 3 1 0 2 3 0.34 0.72 17 0 0 17 11 17 23 13 13 52.7 13.27 86.52 30 2 1 Whitelist LUSC-US 12 0.62 0.9 0 0 0.59 1 High confidence LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC Canonical without polyploidization 15 0.03 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 5 37333830 154158412 1 6 273 3 1 0 0 2 0.11 0.26 13 0 0 13 6 11 18 11 11 52.7 60.48 36.85 84 3 2 Whitelist LUSC-US 0.62 0.5 0 0 0.48 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 10 0.02 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 6 6881993 101993580 1 10 273 2 1 0 0 7 0.3 0.9 16 0 0 16 5 7 17 5 7 52.7 72.64 24.44 60 3 1 Whitelist LUSC-US 0.62 1 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 13 0.02 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 7 1303655 140562260 1 8 273 2 1 0 0 5 0.3 0.69 20 0 0 20 5 9 21 5 5 52.7 93.11 6.66 82 3 2 Whitelist LUSC-US 0.68 0.89 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 11 0.02 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 8 3551336 127409765 1 8 273 4 1 0 0 3 0.04 0.68 12 0 0 12 6 7 14 7 7 52.7 56.89 39.68 86 2 1 Whitelist LUSC-US 0.62 0.88 0 0 0.36 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 13 0.02 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 9 9364048 125377325 1 11 273 5 3 0 1 2 0.09 0.06 16 0 0 16 4 5 18 5 5 52.7 16.05 83.25 58 2 3 Whitelist LUSC-US 0.34 0.18 0 0 0.48 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 20 0.04 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 10 84417134 94664746 3 3 273 0 2 1 0 0 0.3 0.88 4 0 0 4 3 4 19 6 6 52.7 62.34 34.31 24 2 1 Whitelist LUSC-US 0.62 1 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 6 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 11 62322909 68921694 15 15 273 4 3 2 6 0 0.51 0 11 0 0 11 3 4 30 4 5 52.7 27.92 67.91 7 3 4 Whitelist LUSC-US 0.68 0 0 0 0.64 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 30 0.05 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 12 6510050 132119134 1 13 273 3 3 0 0 7 0.11 0.04 18 0 0 18 6 14 19 6 6 52.7 61.32 34.93 116 3 4 Whitelist LUSC-US 4 0.54 0.15 0 0 0.48 1 Linked to high confidence LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC With other complex events 19 0.03 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 13 34853893 95096964 1 5 273 1 2 0 0 2 0.3 0.51 7 0 0 7 7 7 7 7 7 52.7 100 0 19 3 4 Whitelist LUSC-US 0.68 0.75 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 8 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 14 NA NA 0 0 273 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist LUSC-US NA 0.54 0 NA NA 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 0 0 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 15 NA NA 0 0 273 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.7 0 NA NA 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 0 0 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 16 52146838 78721626 1 3 273 2 1 0 0 0 0.3 0.85 4 0 0 4 3 4 7 3 3 52.7 80.18 15.07 7 3 2 Whitelist LUSC-US 0.62 0.99 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 6 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 17 70433434 70495196 2 2 273 1 1 0 0 0 0.57 0.85 3 0 0 NA NA NA 6 3 3 52.7 77.51 22.47 0 3 2 Whitelist LUSC-US 0.68 0.99 0 0 0.64 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 4 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 18 4865823 4875942 1 1 273 0 0 1 0 0 0.39 0.57 2 0.14 NA NA NA NA 10 0 0 52.7 74.26 21.09 25 5 6 Whitelist LUSC-US 0.62 0.79 0.15 NA 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 2 0 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 19 35805938 38457366 2 3 273 0 0 1 1 1 0.57 0 7 0 0 7 3 5 34 7 8 52.7 54.84 36.73 2 5 6 Whitelist LUSC-US 0.87 0 0 0 0.64 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 5 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 20 NA NA 0 0 273 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.12 NA NA NA 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 0 0 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 21 NA NA 0 0 273 0 0 0 0 0 NA 0.4 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist LUSC-US NA 0.64 0 NA NA 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 0 0 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f 22 33851765 51006495 1 3 273 2 1 0 0 0 0.3 0.26 8 0 0 8 7 8 13 8 9 52.7 40.67 47.64 1 2 3 Whitelist LUSC-US 0.62 0.51 0 0 0.59 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 6 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 LUSC-US::fd9ee494-65fe-4de4-adff-7952a059b17f X 7486483 96083445 1 4 273 1 1 0 0 2 0.57 0 1 0 0 NA NA NA NA NA NA 52.7 0 100 33 2 NA Whitelist LUSC-US 0.62 0.02 0 0 0.64 1 No LUSC-US fd9ee494-65fe-4de4-adff-7952a059b17f LUSC 0.42 2.74 Lung-SCC NA 6 0.01 stopgain,17_7578212_A_G,CN:2 4 LUSC-US DO26469 TCGA-60-2698 fd9ee494-65fe-4de4-adff-7952a059b17f male deceased C34.3 62 311 NA NA Included Lung-SCC LUSC US 1 10.23 MALY-DE::4101316 1 NA NA 0 0 69 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.15 NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 2 89160434 89309479 1 1 69 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA 7 3 4 34.33 32.37 64.95 0 1 3 Whitelist MALY-DE 0.62 0.52 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 3 81591651 155801731 32 33 69 4 6 13 9 1 0.12 0 64 0 0 64 5 11 72 5 11 34.33 96.19 0.75 0 5 6 Whitelist MALY-DE 0.57 0 0 0 0.53 0 Low confidence MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL With other complex events 65 0.47 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 4 NA NA 0 0 69 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.84 NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 5 44435608 44472274 1 1 69 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 34.33 24.57 75.29 0 1 2 Whitelist MALY-DE 0.62 0.32 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 6 27121666 27158578 1 1 69 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 3 3 34.33 28.7 71.16 0 3 6 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 7 79780554 118076416 1 1 69 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 3 34.33 88.36 11.42 0 3 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 8 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 9 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 10 2913458 5258820 1 1 69 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA 4 3 3 34.33 85.49 11.09 0 3 NA Whitelist MALY-DE 0.62 0.63 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 11 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 12 62371708 80014599 1 1 69 0 1 0 0 0 0.39 0.57 2 0 0 NA NA NA NA NA NA 34.33 13.18 86.72 0 2 3 Whitelist MALY-DE 0.62 0.79 0 0 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 13 77579527 77726114 1 1 69 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 4 34.33 0.13 97.09 0 1 2 Whitelist MALY-DE 0.62 0.91 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 14 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 15 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 16 NA NA 0 0 69 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 17 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 18 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 19 865066 1051010 1 1 69 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 34.33 0.31 99.51 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 20 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 21 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 22 NA NA 0 0 69 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.79 NA NA NA 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4101316 X 7921820 140802707 1 2 69 1 1 0 0 0 0.57 0.59 3 NA 0.04 NA NA NA NA NA NA 34.33 87.5 9.12 0 3 2 Whitelist MALY-DE 0.68 0.81 NA 0.04 0.64 0 No MALY-DE 4101316 MALY 0.18 2.41 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO27813 4101316 female alive C83.3 other therapy complete response 74 252 252 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.29 MALY-DE::4102009 1 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 2 89161474 89185709 1 1 27 0 0 1 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 23.88 0 99.9 0 2 NA Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 3 114088155 193360874 1 4 27 3 1 0 0 0 0.11 0.04 8 0 0 8 5 8 13 5 5 23.88 58.2 41.66 0 4 2 Whitelist MALY-DE 0.54 0.13 0 0 0.48 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 8 0.15 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 4 86465997 86686409 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.88 0.12 99.87 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 6 318168 35724943 1 2 27 2 0 0 0 0 0.11 0.22 3 0.04 0.04 NA NA NA 4 4 4 23.88 2.33 97.53 0 2 1 Whitelist MALY-DE 0.54 0.45 0.04 0.04 0.48 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 4 0.07 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 7 110085523 110727170 1 2 27 0 2 0 0 0 0.11 0.01 2 0 0 NA NA NA NA NA NA 23.88 99.77 0 0 3 4 Whitelist MALY-DE 0.54 0.06 0 0 0.48 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 4 0.07 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 9 97617624 97720247 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 23.88 52.82 47.08 0 1 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 10 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 11 67320682 67335973 1 1 27 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.88 18.19 81.38 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 13 NA NA 0 0 27 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.83 NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 14 NA NA 0 0 27 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.43 NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 16 2627011 2643467 1 1 27 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 23.88 0 99.88 0 2 NA Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 17 NA NA 0 0 27 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.38 NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 19 19273041 49574373 1 3 27 3 0 0 0 0 0.03 0.02 6 0 0 6 6 6 7 7 7 23.88 0.22 99.34 0 1 2 Whitelist MALY-DE 0.41 0.07 0 0 0.33 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 6 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 22 23199262 23235968 1 1 27 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 23.88 0.07 99.93 0 1 2 Whitelist MALY-DE 0.62 0.52 NA NA 0.59 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4102009 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4102009 MALY 0.68 2.16 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27833 4102009 male alive C83.3 other therapy complete response 64 1695 1695 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 55.76 MALY-DE::4103141 1 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 3 85143991 85170497 1 1 17 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 7.23 0 99.95 0 2 NA Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 4 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 5 157507741 158575187 1 1 17 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 7.23 26.05 71.26 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 6 30843717 31934065 1 1 17 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.23 0.64 99.21 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 8 NA NA 0 0 17 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 9 NA NA 0 0 17 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.34 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 11 NA NA 0 0 17 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.78 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 14 65688601 74775449 2 2 17 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 6 3 4 7.23 7.92 88.38 0 2 1 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 4 0.12 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 15 NA NA 0 0 17 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 18 NA NA 0 0 17 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.22 NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4103141 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4103141 MALY 0.28 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52688 4103141 female alive C82.0 other therapy complete response 60 1954 1954 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.28 MALY-DE::4104893 1 9333651 203915720 2 4 19 0 2 1 1 0 0.57 0 8 0.01 0 8 4 8 13 7 7 11.26 6.88 93.12 0 2 1 Whitelist MALY-DE 0.68 0 0.01 0 0.64 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 8 0.21 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 3 61107617 117585395 1 2 19 1 1 0 0 0 0.57 0.39 2 NA 0 NA NA NA NA NA NA 11.26 0.83 99.12 0 2 3 Whitelist MALY-DE 0.68 0.63 NA 0 0.64 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 4 0.11 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 4 76908855 94798548 1 1 19 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.26 9.36 90.62 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 6 NA NA 0 0 19 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 7 39774563 40100436 1 2 19 1 1 0 0 0 0.57 0.27 4 NA 0 4 4 4 5 5 5 11.26 99.93 0 0 3 4 Whitelist MALY-DE 0.68 0.51 NA 0 0.64 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 4 0.11 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 9 6763831 7067885 1 1 19 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 11.26 0.22 99.07 0 1 2 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 10 131577380 131632265 1 1 19 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 11.26 0.04 99.78 0 1 2 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 14 106212570 106452671 1 2 19 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 11.26 0.62 98.94 0 1 4 Whitelist MALY-DE 0.54 0.02 0 0 0.48 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 4 0.11 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4104893 X 44918509 44952784 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 11.26 99.98 0.02 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4104893 MALY 0.86 1.97 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27807 4104893 male alive C83.3 other therapy complete response 16 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 41.35 MALY-DE::4105105 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 14 106211235 106240581 1 1 4 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 0.03 0.62 99.05 0 2 NA Whitelist MALY-DE 0.62 0 NA NA 0.59 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 2 0.25 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 18 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.02 NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105105 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.41 NA NA NA 0 No MALY-DE 4105105 MALY 0.79 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27781 4105105 female alive C82.0 other therapy complete response 40 516 516 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.97 MALY-DE::4105746 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 2 89132282 89185669 2 2 32 0 1 1 0 0 0.57 0.34 1 0 0 NA NA NA NA NA NA 14.91 0.5 99.4 0 2 NA Whitelist MALY-DE 0.68 0.59 0 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 3 60377425 60493781 2 2 32 2 0 0 0 0 0.11 0 1 0 0 NA NA NA 15 7 7 14.91 94.91 4.97 0 2 NA Whitelist MALY-DE 0.54 0.01 0 0 0.48 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 4 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 6 79676957 132824452 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.91 31.06 68.8 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 7 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 8 36974021 116712116 1 2 32 1 0 1 0 0 0.57 0.68 3 NA 0 NA NA NA NA NA NA 14.91 84.03 15.96 0 3 2 Whitelist MALY-DE 0.68 0.88 NA 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 9 15363707 27470196 1 2 32 0 0 1 1 0 0.57 0.36 4 NA 0 4 3 4 5 3 3 14.91 5.83 93.46 0 2 1 Whitelist MALY-DE 0.68 0.61 NA 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 10 9863210 9893305 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.91 0.02 99.8 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 11 128302833 128607144 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.91 0.23 99.34 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 12 6676809 31432134 1 2 32 0 0 1 1 0 0.57 0.66 1 NA 0 NA NA NA NA NA NA 14.91 0 99.92 0 2 NA Whitelist MALY-DE 0.68 0.87 NA 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 13 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 14 37965202 38148536 2 2 32 0 0 1 1 0 0.57 0.08 2 0 0 NA NA NA 4 3 4 14.91 0.64 98.88 0 2 3 Whitelist MALY-DE 0.68 0.23 0 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 17 37636460 38595366 1 1 32 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 14.91 1.18 98.82 0 2 3 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 18 77195213 77250746 1 1 32 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 14.91 0.07 98.84 0 1 NA Whitelist MALY-DE 0.62 0.8 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 19 NA NA 0 0 32 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.71 NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 20 30757041 35676397 1 2 32 0 0 1 1 0 0.57 0.15 2 NA 0 NA NA NA NA NA NA 14.91 7.71 91.31 0 2 3 Whitelist MALY-DE 0.68 0.35 NA 0 0.64 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 21 NA NA 0 0 32 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.58 NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 22 28513012 29117024 1 1 32 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 5 5 5 14.91 1.53 98.47 0 1 2 Whitelist MALY-DE 0.62 0.57 NA NA 0.59 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4105746 X NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4105746 MALY 0.71 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221127 4105746 male alive C83.3 other therapy complete response 58 549 549 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.06 MALY-DE::4107137 1 54825917 191762949 1 5 129 2 2 0 0 1 0.26 0.87 14 0 0 14 6 6 15 6 6 80.95 54.21 42.5 0 5 4 Whitelist MALY-DE 0.68 1 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 9 0.03 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 2 24473819 89291929 1 4 129 2 2 0 0 0 0.26 0.27 7 0 0 7 3 5 10 3 6 80.95 99.91 0 0 3 4 Whitelist MALY-DE 0.62 0.51 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 3 46971042 60531524 1 2 129 1 1 0 0 0 0.57 0.39 3 0 0 NA NA NA 4 4 4 80.95 94.58 5.39 0 3 2 Whitelist MALY-DE 0.68 0.63 0 0 0.64 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 4 4954104 174036404 1 3 129 1 0 1 0 1 0.57 0.6 7 0 0 7 5 7 10 6 6 80.95 99.87 0.12 0 3 2 Whitelist MALY-DE 0.62 0.81 0 0 0.64 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 5 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 5 11417317 13458561 2 2 129 0 0 1 1 0 0.57 0.2 4 0.03 0 4 4 4 6 5 6 80.95 97.33 0 0 4 5 Whitelist MALY-DE 0.68 0.42 0.03 0 0.64 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 6 13760428 65913832 1 1 129 0 0 1 0 0 0.39 0.01 4 NA NA 4 4 4 5 4 4 80.95 37.25 62.57 0 2 3 Whitelist MALY-DE 0.62 0.04 NA NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 7 64263860 130707798 1 3 129 3 0 0 0 0 0.03 0.56 5 0 0 5 5 5 5 5 5 80.95 99.78 0 1 5 4 Whitelist MALY-DE 0.41 0.79 0 0 0.33 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 8 59845994 72281228 2 2 129 2 0 0 0 0 0.11 0.54 1 0 0 NA NA NA 9 3 4 80.95 99.98 0.01 0 3 NA Whitelist MALY-DE 0.54 0.77 0 0 0.48 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 9 117087246 130492725 3 4 129 2 0 1 0 1 0.3 0 5 0 0 5 3 5 14 4 5 80.95 47.46 49.46 0 3 2 Whitelist MALY-DE 0.68 0.03 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 7 0.03 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 10 52136793 135194470 1 4 129 2 1 0 0 1 0.3 0.67 3 0 0 NA NA NA 8 4 5 80.95 96.61 0 0 3 4 Whitelist MALY-DE 0.68 0.87 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 7 0.03 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 11 9528693 106747742 1 2 129 1 1 0 0 0 0.57 0.14 4 NA 0.01 4 3 4 5 3 3 80.95 99.57 0 0 3 1 Whitelist MALY-DE 0.68 0.33 NA 0.01 0.64 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 12 73092154 75504798 2 2 129 0 0 1 1 0 0.57 0 4 0 0 4 4 4 21 5 7 80.95 99.78 0.14 0 1 3 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 13 68090867 113506860 1 6 129 3 2 0 1 0 0.34 0.09 9 0 0 9 4 5 10 4 4 80.95 99.98 0.02 0 4 3 Whitelist MALY-DE 0.62 0.25 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 12 0.05 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 14 23610397 106375767 1 7 129 3 1 0 0 3 0.11 0.02 7 0 0 7 3 4 8 3 4 80.95 76.23 20.48 1 1 2 Whitelist MALY-DE 0.62 0.08 0 0 0.48 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 11 0.04 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 15 44473164 44485138 1 1 129 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 80.95 100 0 0 4 NA Whitelist MALY-DE 0.62 0.52 NA NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 16 7846838 89638525 1 5 129 2 0 0 1 2 0.3 0.01 8 0 0 8 4 8 9 4 4 80.95 90.52 8.59 0 4 3 Whitelist MALY-DE 0.68 0.04 0 0 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 17 75967024 76162322 1 1 129 1 0 0 0 0 0.39 0.17 2 0 NA NA NA NA 6 3 6 80.95 73.47 26.53 0 3 4 Whitelist MALY-DE 0.62 0.38 0 NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 18 39135308 77243732 1 9 129 4 1 0 0 4 0.04 0 11 0 0 11 8 11 13 10 10 80.95 56.35 42.55 0 2 3 Whitelist MALY-DE 4 0.62 0.02 0 0 0.36 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 14 0.05 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 19 10851477 54730547 1 3 129 3 0 0 0 0 0.03 0.33 6 0 0 6 4 6 6 4 4 80.95 99.68 0 0 4 5 Whitelist MALY-DE 0.41 0.58 0 0 0.33 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 20 30967174 30982412 1 1 129 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 80.95 99.01 0 0 4 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 21 NA NA 0 0 129 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 22 31920318 31956507 1 1 129 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 80.95 100 0 0 3 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4107137 X 55867533 55877825 1 1 129 0 0 1 0 0 0.39 1 2 0 NA NA NA NA 8 5 6 80.95 49.96 50.04 0 1 2 Whitelist MALY-DE 0.62 1 0 NA 0.59 0 No MALY-DE 4107137 MALY 0.4 3.25 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27827 4107137 male alive C83.3 other therapy complete response 59 1182 1182 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 38.88 MALY-DE::4108101 1 149940794 191746515 1 2 46 1 0 1 0 0 0.57 1 4 0 0 4 4 4 5 4 5 26.96 39.84 60.16 0 1 3 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 2 18021865 89185672 1 4 46 0 1 2 0 1 0.3 0 10 0 0 10 3 4 13 3 4 26.96 11.67 88.24 0 2 7 Whitelist MALY-DE 0.62 0.01 0 0 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 7 0.08 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 3 63928723 119799492 1 4 46 0 1 1 1 1 0.8 0.14 6 0 0 6 3 4 7 3 4 26.96 96.59 0.25 0 5 1 Whitelist MALY-DE 0.68 0.33 0 0 0.84 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 7 0.08 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 4 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 5 NA NA 0 0 46 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.62 NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 6 27907461 104323212 1 1 46 0 0 0 1 0 0.39 0.36 1 0 0 NA NA NA NA NA NA 26.96 16.29 83.57 0 2 NA Whitelist MALY-DE 0.62 0.61 0 0 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 7 28947942 82732558 1 2 46 0 0 0 1 1 0.39 0.31 1 NA NA NA NA NA 4 4 4 26.96 26.77 72.99 0 2 NA Whitelist MALY-DE 0.68 0.56 NA NA 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 3 0.03 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 8 NA NA 0 0 46 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.91 NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 9 21880250 22039613 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 26.96 0.11 97.31 0 0 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 10 59064367 108099379 1 3 46 0 0 0 1 2 0.39 0.16 1 0 0 NA NA NA NA NA NA 26.96 0 99.82 0 2 NA Whitelist MALY-DE 0.87 0.37 0 0 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 11 NA NA 0 0 46 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 13 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 14 106239892 106829595 1 2 46 2 0 0 0 0 0.11 0.06 2 0 0 NA NA NA NA NA NA 26.96 0.55 83.97 0 0 1 Whitelist MALY-DE 0.54 0.18 0 0 0.48 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 15 34389925 53504702 1 2 46 2 0 0 0 0 0.11 0.37 2 NA 0 NA NA NA NA NA NA 26.96 18.64 65.85 0 1 2 Whitelist MALY-DE 0.54 0.62 NA 0 0.48 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 18 37322385 65802387 2 2 46 0 0 2 0 0 0.11 0.13 2 NA 0 NA NA NA NA NA NA 26.96 95.35 0 0 4 5 Whitelist MALY-DE 0.54 0.31 NA 0 0.48 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 19 3981799 42629807 1 2 46 2 0 0 0 0 0.11 0.23 3 NA 0.01 NA NA NA 4 3 3 26.96 26.13 73.69 0 2 1 Whitelist MALY-DE 0.54 0.46 NA 0.01 0.48 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 20 3236542 3696074 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.96 0.73 98.28 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 21 30356576 30409553 1 1 46 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 26.96 0 77.35 0 2 NA Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 22 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108101 X 1562140 1643395 1 1 46 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 26.96 100 0 0 1 NA Whitelist MALY-DE 0.62 0.91 NA NA 0.59 0 No MALY-DE 4108101 MALY 0.5 2.11 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27789 4108101 male alive C83.3 other therapy partial response 66 292 292 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.61 MALY-DE::4108992 1 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 2 201731281 202246128 1 1 244 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 16.54 0.21 99.68 0 1 2 Whitelist MALY-DE 0.62 0 NA NA 0.59 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 2 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 3 10293357 118705637 2 10 244 0 0 1 1 8 0.57 0.26 7 0 0 7 7 7 7 7 7 16.54 2.32 97.54 0 2 1 Whitelist MALY-DE 9 0.86 0.5 0 0 0.64 1 Linked to high confidence MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL Canonical without polyploidization 12 0.02 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 4 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 5 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 6 22217379 75868188 1 1 244 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 5 0 3 16.54 99.85 0 0 1 3 Whitelist MALY-DE 0.62 0 NA NA 0.59 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 2 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 7 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 8 NA NA 0 0 244 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 9 19438790 35406023 10 18 244 3 4 1 2 8 0.57 0.01 10 0 0 10 10 10 11 11 11 16.54 3.57 95.73 0 1 2 Whitelist MALY-DE 3 0.68 0.05 0 0 0.64 1 High confidence MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL Canonical without polyploidization 28 0.06 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 10 28967917 127614040 76 171 244 20 13 22 21 95 0.45 0 76 0 0 76 57 76 79 60 60 16.54 24.43 75.4 0 1 2 Whitelist MALY-DE 0.62 0 0 0 0.64 1 High confidence MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL Canonical without polyploidization 247 0.51 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 11 26426720 124921346 20 91 244 6 5 7 2 71 0.42 0 36 0 0 36 30 36 39 32 32 16.54 10.08 89.49 0 1 2 Whitelist MALY-DE 10 0.93 0 0 0 0.63 1 High confidence MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL Canonical without polyploidization 111 0.23 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 12 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 13 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 14 106178392 106326754 1 2 244 1 1 0 0 0 0.57 0.27 2 0 0 NA NA NA NA NA NA 16.54 0.13 98.97 1 1 2 Whitelist MALY-DE 0.68 0.51 0 0 0.64 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 15 40965406 59998854 1 1 244 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 16.54 18.56 81.44 0 1 2 Whitelist MALY-DE 0.62 0.07 NA NA 0.59 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 2 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 16 27507888 27549911 1 1 244 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 16.54 0 99.91 0 2 NA Whitelist MALY-DE 0.62 0.1 NA NA 0.59 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 2 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 17 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 18 NA NA 0 0 244 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.21 NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 19 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 20 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 21 NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 22 22677345 23247314 1 1 244 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 16.54 1.11 98.89 0 1 2 Whitelist MALY-DE 0.62 0.63 NA NA 0.59 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 2 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4108992 X NA NA 0 0 244 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4108992 MALY 0.77 1.88 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52689 4108992 male alive C82.0 other therapy partial response 68 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.81 MALY-DE::4110378 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 2 89161068 89197304 2 2 12 0 0 1 1 0 0.57 0.27 2 NA 0 NA NA NA 4 0 3 2.01 0.28 96.75 0 0 1 Whitelist MALY-DE 0.68 0.51 NA 0 0.64 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 4 0.17 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 5 87964206 88022307 1 1 12 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 2.01 0.03 99.83 0 1 2 Whitelist MALY-DE 0.62 0.13 0 NA 0.59 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 10 87580553 132220670 1 1 12 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 2.01 32.94 66.89 0 1 2 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 14 106212532 106757651 1 5 12 3 0 0 0 2 0.03 0 4 0 0 4 4 4 6 6 6 2.01 0.26 99.19 1 1 2 Whitelist MALY-DE 0.45 0 0 0 0.33 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 8 0.33 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 18 NA NA 0 0 12 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.14 NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4110378 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4110378 MALY 0.64 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52653 4110378 female alive C82.3 other therapy complete response 69 377 377 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.4 MALY-DE::4111326 1 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 2 152936728 203216213 1 2 36 0 0 0 1 1 0.39 1 3 NA NA NA NA NA 7 7 7 16.15 8.55 91.36 0 2 1 Whitelist MALY-DE 0.68 1 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 3 0.04 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 3 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 4 185256625 185464968 1 1 36 0 0 1 0 0 0.39 0.09 2 0 NA NA NA NA 5 3 3 16.15 2.89 97.09 0 0 1 Whitelist MALY-DE 0.62 0.25 0 NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 5 119881242 128924154 1 1 36 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 16.15 5 94.99 0 1 2 Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 6 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 7 NA NA 0 0 36 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 8 NA NA 0 0 36 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0.68 NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 10 98345875 99126592 3 3 36 1 0 1 1 0 0.8 0.23 4 0 0 4 0 3 4 0 3 16.15 0.53 99.28 0 2 0 Whitelist MALY-DE 0.87 0.46 0 0 0.84 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 6 0.08 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 11 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 12 NA NA 0 0 36 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.89 NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 13 30802632 31405812 1 1 36 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 6 6 6 16.15 67.42 32.58 0 1 2 Whitelist MALY-DE 0.62 0.12 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 14 106211020 106326508 1 1 36 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 16.15 0 99.08 0 2 3 Whitelist MALY-DE 0.62 0.03 0 NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 16 50859705 60175247 5 7 36 1 0 2 2 2 0.53 0 5 0 0 5 5 5 11 11 11 16.15 5.09 94.8 0 2 1 Whitelist MALY-DE 0.62 0 0 0 0.64 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 12 0.17 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 17 7223771 7715301 1 1 36 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 16.15 0.61 99.38 0 1 2 Whitelist MALY-DE 0.62 0.5 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 18 NA NA 0 0 36 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 19 54691203 54704064 1 1 36 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 16.15 0 99.83 0 2 NA Whitelist MALY-DE 0.62 0.36 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 20 42925344 44209003 1 1 36 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 16.15 2.04 96.98 0 1 2 Whitelist MALY-DE 0.62 0.77 NA NA 0.59 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111326 X NA NA 0 0 36 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4111326 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52690 4111326 female alive C83.3 other therapy complete response 74 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4111337 1 152168528 204980295 1 4 226 1 0 0 0 3 0.39 0.01 7 0 0 7 6 7 15 6 7 92.23 99.82 0.18 1 6 7 Whitelist MALY-DE 6 0.68 0.03 0 0 0.59 1 Linked to high confidence MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL After polyploidization 5 0.01 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 2 205201711 236920306 1 1 226 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 92.23 86.75 13.15 0 2 4 Whitelist MALY-DE 0.62 0 NA NA 0.59 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 2 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 3 59742439 195629481 1 10 226 3 1 0 0 6 0.11 0.24 11 0 0 11 4 5 13 5 5 92.23 93.6 2.95 0 3 4 Whitelist MALY-DE 0.54 0.48 0 0 0.48 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 14 0.03 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 4 NA NA 0 0 226 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0 NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 5 24164973 24191041 2 2 226 0 0 1 1 0 0.57 0 2 NA 0 NA NA NA NA NA NA 92.23 99.88 0 0 5 7 Whitelist MALY-DE 0.68 0 NA 0 0.64 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 4 0.01 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 6 64848966 120732911 21 23 226 4 7 5 5 2 0.82 0 27 0 0 27 7 9 32 9 11 92.23 99.8 0.18 0 3 4 Whitelist MALY-DE 1 0.95 0 0 0 0.87 1 High confidence MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL With other complex events 44 0.1 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 7 73718407 86971550 1 2 226 1 0 0 1 0 0.57 0.04 4 0 0 4 3 4 8 3 3 92.23 99.78 0 0 3 4 Whitelist MALY-DE 0.68 0.13 0 0 0.64 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 4 0.01 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 8 87957422 100756136 1 2 226 2 0 0 0 0 0.11 0 4 NA 0 4 3 4 5 3 5 92.23 99.83 0.17 0 4 2 Whitelist MALY-DE 0.54 0.01 NA 0 0.48 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 4 0.01 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 9 6135679 115224493 1 6 226 1 1 1 1 2 1 0.49 14 0 0 14 7 10 15 7 10 92.23 97.41 0 4 5 6 Whitelist MALY-DE 3 0.93 0.73 0 0 1 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 10 0.02 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 10 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 11 114660441 124818719 18 69 226 3 6 3 6 51 0.57 0 27 0 0 27 4 5 36 4 5 92.23 99.47 0.11 0 3 8 Whitelist MALY-DE 0.68 0 0 0 0.64 1 Low confidence MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL With other complex events 87 0.19 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 12 17128247 17295895 8 38 226 1 0 4 3 30 0.17 0 9 0 0 9 6 7 26 6 7 92.23 96.32 0 0 3 7 Whitelist MALY-DE 0.65 0 0 0 0.59 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 46 0.1 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 13 NA NA 0 0 226 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 23 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 14 106055723 106329697 1 7 226 2 0 0 0 5 0.11 0.25 4 0 0 4 3 4 5 3 3 92.23 99.05 0.71 2 3 2 Whitelist MALY-DE 1_3 0.54 0.49 0 0 0.48 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 9 0.02 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 15 NA NA 0 0 226 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.09 NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 16 78442656 78544843 1 1 226 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 92.23 99.91 0 0 3 5 Whitelist MALY-DE 0.62 0.13 NA NA 0.59 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 2 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 17 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 18 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 19 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 20 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 21 21123327 21591529 1 1 226 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 92.23 67.4 0.97 0 2 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 2 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 22 NA NA 0 0 226 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL NA 0 0 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4111337 X 2879067 141829230 23 23 226 7 5 6 5 0 0.92 0 66 0 0 66 13 32 69 13 13 92.23 99.4 0.37 0 6 5 Whitelist MALY-DE 0.95 0 0 0 0.94 1 High confidence MALY-DE 4111337 MALY 0.62 4.03 Lymph-BNHL With other complex events 46 0.1 frameshift_deletion,17_7572930_-_GTCT,CN:2 5 MALY-DE DO52692 4111337 female alive C82.0 other therapy complete response 79 317 317 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.43 MALY-DE::4112447 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 4 NA NA 0 0 11 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 6 155925122 157449580 1 1 11 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 6.2 0.89 99.09 0 1 2 Whitelist MALY-DE 0.62 0.74 NA NA 0.59 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 2 0.09 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 14 106070166 106240360 1 2 11 1 0 0 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 6.2 0.55 98.94 0 0 2 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 4 0.18 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 15 NA NA 0 0 11 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.51 NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 17 37405479 38455749 1 1 11 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 6.2 1.29 98.71 0 2 4 Whitelist MALY-DE 0.62 0.5 NA NA 0.59 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 2 0.09 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 18 NA NA 0 0 11 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.12 NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 19 7812242 50930387 2 2 11 0 0 1 1 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 6.2 0 99.83 0 2 NA Whitelist MALY-DE 0.68 0.08 NA 0 0.64 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 4 0.18 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 22 NA NA 0 0 11 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.31 NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112447 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112447 MALY 0.4 2.1 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52647 4112447 male alive C82.0 other therapy partial response 46 106 106 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.49 MALY-DE::4112512 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 3 40668579 81891241 2 2 8 1 0 0 1 0 0.57 0.01 4 0 0 4 4 4 5 5 5 8.72 19.63 80.27 0 1 2 Whitelist MALY-DE 0.68 0.06 0 0 0.64 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 4 0.25 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 8 NA NA 0 0 8 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.59 NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 12 2196751 80185104 2 2 8 1 0 1 0 0 0.57 0.05 2 NA 0 NA NA NA NA NA NA 8.72 59.29 40.63 0 2 3 Whitelist MALY-DE 0.68 0.17 NA 0 0.64 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 4 0.25 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 14 106329511 106757652 1 2 8 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA NA NA NA 8.72 0.37 99.08 0 2 0 Whitelist MALY-DE 0.54 0.01 NA 0 0.48 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 4 0.25 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4112512 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4112512 MALY 0.89 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 3 MALY-DE DO27795 4112512 female alive C83.7 other therapy complete response 18 1510 1510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.67 MALY-DE::4113191 1 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 2 179967679 180612716 1 1 17 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 0.25 0.27 99.64 0 2 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 7 NA NA 0 0 17 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.19 NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 8 64949027 65847920 1 1 17 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 0.25 0 99.99 0 2 NA Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 12 33451601 33588934 1 1 17 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 0.25 0 99.92 0 2 NA Whitelist MALY-DE 0.62 0.78 NA NA 0.59 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 13 65316853 65655693 1 1 17 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 0.25 0.29 99.71 0 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 14 26881662 106321515 1 2 17 1 0 1 0 0 0.57 0 3 0 0 NA NA NA 4 4 4 0.25 1.39 97.71 0 1 2 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 4 0.12 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 18 NA NA 0 0 17 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.22 NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113191 X NA NA 0 0 17 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.44 NA NA NA 0 No MALY-DE 4113191 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52693 4113191 female alive C82.0 other therapy complete response 62 775 775 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.49 MALY-DE::4113825 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 5 NA NA 0 0 7 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.62 NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.55 NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 13 66823876 66926677 1 1 7 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 0.03 0 100 0 2 NA Whitelist MALY-DE 0.62 0.45 NA NA 0.59 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 2 0.14 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 14 NA NA 0 0 7 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.08 NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 18 60787272 60988013 1 2 7 1 0 0 0 1 0.39 0.01 1 NA NA NA NA NA NA NA NA 0.03 0 99.99 0 2 NA Whitelist MALY-DE 0.68 0.06 NA NA 0.59 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 3 0.21 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4113825 X 57195945 57256355 1 1 7 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 0.03 0.04 96.04 0 1 2 Whitelist MALY-DE 0.62 0.55 NA NA 0.59 0 No MALY-DE 4113825 MALY 0.64 2 Lymph-BNHL NA 2 0.14 NA 2 MALY-DE DO52695 4113825 female alive C82.0 other therapy stable disease 74 450 450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.8 MALY-DE::4115001 1 NA NA 0 0 61 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.84 NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 2 NA NA 0 0 61 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.19 NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 3 60402498 182199532 1 4 61 3 1 0 0 0 0.11 1 6 0 0 6 5 6 8 5 7 83.26 93.56 6.32 0 3 2 Whitelist MALY-DE 0.54 1 0 0 0.48 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 8 0.07 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 4 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 5 65272137 65334212 1 1 61 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 83.26 99.87 0 0 4 NA Whitelist MALY-DE 0.62 0.4 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 6 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 7 147195714 147270730 1 1 61 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 83.26 99.77 0 0 3 5 Whitelist MALY-DE 0.62 0.51 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 8 114253687 114507607 1 1 61 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 83.26 34.7 65.19 0 4 NA Whitelist MALY-DE 0.62 0.78 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 9 6787574 76697941 1 2 61 2 0 0 0 0 0.11 1 8 NA 0.04 8 3 5 9 3 5 83.26 99.14 0.16 0 3 4 Whitelist MALY-DE 0.54 1 NA 0.04 0.48 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 4 0.03 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 10 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 11 NA NA 0 0 61 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 12 25177528 103719926 2 2 61 0 0 1 1 0 0.57 0.53 1 0 0 NA NA NA NA NA NA 83.26 99.92 0 0 5 NA Whitelist MALY-DE 0.68 0.76 0 0 0.64 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 4 0.03 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 13 77736340 77861588 1 1 61 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 83.26 88.92 11.08 0 3 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 14 106211980 106325800 1 1 61 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA 4 3 3 83.26 99.1 0 0 0 NA Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 16 78248630 88994801 1 2 61 2 0 0 0 0 0.11 0.02 4 0 0 4 3 4 5 3 5 83.26 99.91 0 0 5 3 Whitelist MALY-DE 0.54 0.09 0 0 0.48 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 4 0.03 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 17 35776511 77685244 19 21 61 3 5 5 6 2 0.8 0 15 0 0 15 4 8 20 6 9 83.26 41.67 53.88 0 3 2 Whitelist MALY-DE 0.76 0 0 0 0.84 0 Low confidence MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL With other complex events 40 0.33 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 18 74672940 74686766 1 1 61 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 83.26 99.99 0 0 4 NA Whitelist MALY-DE 0.62 0.03 0 NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 19 1205824 12841708 1 3 61 3 0 0 0 0 0.03 0.12 4 0.1 0 4 3 4 6 3 6 83.26 76.38 16.34 0 5 2 Whitelist MALY-DE 0.41 0.3 0.1 0 0.33 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 6 0.05 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 20 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 21 22406710 22815664 1 1 61 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 83.26 77.35 0 0 3 4 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 0 0 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4115001 X 1570373 1768565 1 1 61 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 83.26 99.77 0 0 3 4 Whitelist MALY-DE 0.62 0.93 NA NA 0.59 0 No MALY-DE 4115001 MALY 0.46 3.56 Lymph-BNHL NA 2 0.02 NA 5 MALY-DE DO52654 4115001 female alive C83.3 other therapy complete response 70 2063 2063 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 67.86 MALY-DE::4116738 1 154191125 177739560 7 9 127 3 0 3 1 2 0.28 0 33 0 0 33 3 5 45 3 5 82.97 83.37 13.66 4 8 6 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 16 0.06 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 2 150704538 201006719 2 2 127 0 0 1 1 0 0.57 0.75 3 0 0 NA NA NA 13 3 3 82.97 70.8 26.13 0 3 1 Whitelist MALY-DE 0.68 0.92 0 0 0.64 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 3 180167934 180458689 3 3 127 2 1 0 0 0 0.3 0.73 5 0 0 5 3 4 17 3 4 82.97 92.32 7.57 0 4 0 Whitelist MALY-DE 0.62 0.9 0 0 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 4 66312172 181869948 1 5 127 2 0 0 0 3 0.11 0.28 5 0 0 5 4 5 6 4 6 82.97 80.09 19.72 0 2 3 Whitelist MALY-DE 0.62 0.53 0 0 0.48 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 7 0.03 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 5 27542331 144932500 1 11 127 4 0 1 0 6 0.04 0.09 16 0 0 16 6 6 18 6 6 82.97 97.19 0.03 1 3 4 Whitelist MALY-DE 0.62 0.26 0 0 0.36 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 16 0.06 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 6 12420802 168252808 1 7 127 4 0 1 0 2 0.04 0.57 13 0 0 13 4 4 13 4 6 82.97 97.14 0.03 0 3 5 Whitelist MALY-DE 0.47 0.8 0 0 0.36 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 12 0.05 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 7 29798297 118646521 1 4 127 1 1 0 0 2 0.57 1 9 0 0 9 4 5 10 4 4 82.97 49.28 47.96 0 3 2 Whitelist MALY-DE 0.54 1 0 0 0.64 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 8 26067658 123006220 1 5 127 2 1 0 0 2 0.3 0.31 10 0 0 10 3 4 16 4 5 82.97 86.84 13.15 0 4 3 Whitelist MALY-DE 0.62 0.56 0 0 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 9 15412572 27529125 2 2 127 1 0 1 0 0 0.57 0.03 1 0 0 NA NA NA 17 3 5 82.97 96.86 0.04 0 4 NA Whitelist MALY-DE 0.68 0.12 0 0 0.64 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 10 68035961 108307370 1 5 127 2 1 0 0 2 0.3 0.53 7 0 0 7 4 4 10 5 5 82.97 73.01 26.82 0 3 2 Whitelist MALY-DE 0.93 0.76 0 0 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 11 NA NA 0 0 127 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA 14 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0.42 0 NA NA 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 12 124940065 125011323 1 1 127 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 82.97 84.28 15.63 0 0 2 Whitelist MALY-DE 0.62 0.12 NA NA 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 13 19930904 92028763 1 2 127 0 0 0 1 1 0.39 0.21 5 0 0 5 3 4 6 3 5 82.97 100 0 0 4 3 Whitelist MALY-DE 0.54 0.44 0 0 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 3 0.01 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 14 46455594 106815723 1 6 127 5 0 0 1 0 0.01 0.07 9 0 0 9 3 5 13 5 5 82.97 96.62 0.09 0 4 0 Whitelist MALY-DE 0.25 0.2 0 0 0.19 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 12 0.05 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 15 28707974 100050607 1 6 127 4 0 1 1 0 0.11 0.03 7 0 0 7 6 7 9 6 6 82.97 75.01 19.28 0 3 5 Whitelist MALY-DE 0.54 0.1 0 0 0.48 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 12 0.05 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 16 78118986 88794252 1 2 127 2 0 0 0 0 0.11 0.78 3 NA 0 NA NA NA 5 3 4 82.97 95.48 0 0 5 4 Whitelist MALY-DE 0.54 0.93 NA 0 0.48 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 17 NA NA 0 0 127 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.94 NA NA NA 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 18 77147473 77200115 1 1 127 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 82.97 94.23 0 0 1 NA Whitelist MALY-DE 0.62 0.51 NA NA 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 19 10236263 16652123 1 2 127 1 0 1 0 0 0.57 0.32 4 0 0 4 4 4 6 4 4 82.97 99.83 0 0 4 5 Whitelist MALY-DE 0.68 0.57 0 0 0.64 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 20 NA NA 0 0 127 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 21 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 22 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4116738 X 38501159 41405927 1 2 127 1 0 0 0 1 0.39 1 1 0 NA NA NA NA 6 6 6 82.97 100 0 0 1 NA Whitelist MALY-DE 5 0.68 1 0 NA 0.59 0 No MALY-DE 4116738 MALY 0.3 3.64 Lymph-BNHL NA 3 0.01 NA 3 MALY-DE DO27777 4116738 male alive C83.3 other therapy complete response 15 1513 1513 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 49.77 MALY-DE::4119027 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.52 NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 5 NA NA 0 0 4 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.46 NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.41 NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 14 106330463 106357559 1 1 4 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 15.79 0.42 99.08 0 1 2 Whitelist MALY-DE 0.62 0.03 NA NA 0.59 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 2 0.25 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119027 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119027 MALY 0.94 2.04 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578415_T_A,CN:2 2 MALY-DE DO27764 4119027 male alive C83.7 other therapy complete response 12 2271 2271 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.7 MALY-DE::4119279 1 NA NA 0 0 73 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.32 NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 2 41930490 89162699 1 2 73 1 1 0 0 0 0.57 0.29 3 0 0 NA NA NA 5 3 3 19.5 0.21 96.72 0 1 2 Whitelist MALY-DE 0.68 0.53 0 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 4 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 3 NA NA 0 0 73 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA 12 4 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0.38 0 NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 4 13562220 13590147 1 1 73 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 19.5 0.01 99.98 0 1 2 Whitelist MALY-DE 0.62 0.48 NA NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 5 150155376 175196604 1 1 73 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 3 3 19.5 14.68 85.19 0 1 2 Whitelist MALY-DE 0.62 0.25 NA NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 6 NA NA 0 0 73 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.58 NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 7 65546968 66863774 1 1 73 0 1 0 0 0 0.39 0.8 2 0.02 NA NA NA NA NA NA NA 19.5 0.83 98.95 0 2 4 Whitelist MALY-DE 0.62 0.95 0.02 NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 8 10202666 94118694 1 3 73 1 0 1 0 1 0.57 1 7 NA 0 7 4 7 9 5 5 19.5 43.11 56.88 0 2 0 Whitelist MALY-DE 0.87 1 NA 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 5 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 9 24084427 29943903 1 2 73 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 19.5 0.03 99.83 0 2 3 Whitelist MALY-DE 0.68 1 NA 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 4 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 10 7037330 50621756 2 3 73 0 1 0 1 1 0.57 0.39 3 0 0 NA NA NA 11 5 9 19.5 45.56 54.26 0 1 2 Whitelist MALY-DE 0.87 0.64 0 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 5 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 11 31644374 100953198 4 5 73 0 1 1 2 1 0.57 0.01 10 0 0 10 3 5 14 3 3 19.5 64.19 35.38 0 4 2 Whitelist MALY-DE 0.62 0.03 0 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 9 0.06 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 12 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 13 48200726 48214593 1 1 73 1 0 0 0 0 0.39 0.32 1 0 NA NA NA NA 6 0 3 19.5 36 64 0 2 NA Whitelist MALY-DE 0.62 0.57 0 NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 14 106240454 106452728 1 3 73 3 0 0 0 0 0.03 0.5 2 0 0 NA NA NA NA NA NA 19.5 0.72 99.05 1 1 2 Whitelist MALY-DE 0.41 0.74 0 0 0.33 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 6 0.04 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 15 25608753 65462970 1 2 73 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 19.5 0.43 99.39 0 1 2 Whitelist MALY-DE 0.54 1 NA 0 0.48 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 4 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 16 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 17 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 18 50367874 54989563 4 8 73 0 0 2 2 4 0.26 0 20 0 0 20 3 4 29 3 4 19.5 74.54 25.45 0 3 4 Whitelist MALY-DE 0.54 0 0 0 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 12 0.08 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 19 22962011 22972374 1 1 73 1 0 0 0 0 0.39 0.06 1 0 NA NA NA NA 5 0 3 19.5 2.95 96.79 0 2 NA Whitelist MALY-DE 0.62 0.18 0 NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 20 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 21 NA NA 0 0 73 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.46 NA NA NA 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 22 23090407 42964600 1 2 73 1 0 1 0 0 0.57 0.06 7 0 0 7 6 7 9 6 8 19.5 16.9 83.1 0 1 2 Whitelist MALY-DE 0.68 0.18 0 0 0.64 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 4 0.03 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4119279 X 144534526 144546959 1 1 73 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 6 5 5 19.5 97.12 2.65 0 2 3 Whitelist MALY-DE 0.62 1 0 NA 0.59 0 No MALY-DE 4119279 MALY 0.86 2.18 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577511_G_A,CN:1 2 MALY-DE DO52659 4119279 female alive C83.3 other therapy complete response 62 693 693 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 22.8 MALY-DE::4120157 1 25057651 226403465 1 3 40 2 1 0 0 0 0.3 1 6 0.1 0 6 5 6 8 6 8 13.99 29.8 67.23 0 2 1 Whitelist MALY-DE 0.62 1 0.1 0 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 6 0.08 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 2 45033249 80591198 2 2 40 0 0 1 1 0 0.57 0.15 3 0 0 NA NA NA 8 3 4 13.99 36.7 60.21 0 2 5 Whitelist MALY-DE 0.68 0.34 0 0 0.64 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 4 0.05 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 3 31867171 152016372 1 3 40 1 0 1 1 0 0.8 0.76 4 0.01 0 4 4 4 5 5 5 13.99 10.63 89.22 0 1 2 Whitelist MALY-DE 0.87 0.92 0.01 0 0.84 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 6 0.08 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 4 2674622 187897033 1 4 40 3 0 1 0 0 0.11 0.05 7 0 0 7 5 6 9 5 6 13.99 1.35 96.27 0 2 1 Whitelist MALY-DE 0.54 0.16 0 0 0.48 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 8 0.1 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 5 103103879 103118798 1 1 40 0 1 0 0 0 0.39 0.32 3 0 0 NA NA NA NA NA NA 13.99 0 99.86 0 2 3 Whitelist MALY-DE 0.62 0.57 0 0 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 2 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 6 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 7 54282258 110771100 1 2 40 1 0 0 1 0 0.57 1 4 NA 0 4 3 4 4 3 4 13.99 0.11 97.34 0 2 1 Whitelist MALY-DE 0.68 1 NA 0 0.64 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 4 0.05 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 8 70566879 88016524 2 2 40 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 13.99 0.1 99.89 0 2 NA Whitelist MALY-DE 0.68 1 NA 0 0.64 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 4 0.05 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 9 NA NA 0 0 40 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 10 NA NA 0 0 40 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.68 NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 11 8488029 8503947 1 1 40 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 5 5 5 13.99 0.01 99.56 0 1 2 Whitelist MALY-DE 0.62 0.13 0 NA 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 2 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 12 97774588 97788838 1 1 40 0 1 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 13.99 0 99.92 0 2 NA Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 2 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 13 NA NA 0 0 40 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.65 NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 14 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 15 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 16 NA NA 0 0 40 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.09 NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 17 41175447 41331998 1 1 40 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 4 4 4 13.99 17.49 82.49 0 1 2 Whitelist MALY-DE 0.62 0.54 NA NA 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 2 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 18 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 19 6458654 19406244 1 2 40 1 1 0 0 0 0.57 0.19 2 NA 0 NA NA NA 4 3 3 13.99 0.73 92 0 0 2 Whitelist MALY-DE 0.68 0.41 NA 0 0.64 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 4 0.05 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 20 NA NA 0 0 40 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.44 NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 21 NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 22 22782369 23235962 1 1 40 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 13.99 0 76.22 0 2 NA Whitelist MALY-DE 0.62 0.63 NA NA 0.59 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 2 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120157 X NA NA 0 0 40 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4120157 MALY 0.72 1.92 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:1 2 MALY-DE DO52684 4120157 male deceased C83.3 other therapy complete response 46 380 383 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.5 MALY-DE::4120193 1 NA NA 0 0 101 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.09 NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 2 3501118 241999895 12 12 101 5 4 2 1 0 0.34 0.03 27 0 0 27 12 13 28 12 13 15.81 12.02 85.28 0 2 3 Whitelist MALY-DE 0.62 0.11 0 0 0.59 1 High confidence MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL With other complex events 24 0.12 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 3 109528626 116716002 3 3 101 1 0 1 1 0 0.8 0.17 4 0 0 4 4 4 5 5 5 15.81 1.01 98.96 0 1 2 Whitelist MALY-DE 0.87 0.38 0 0 0.84 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 4 63151954 86069771 1 1 101 0 0 0 1 0 0.39 0.07 3 NA NA NA NA NA 5 5 5 15.81 17.35 80.28 0 2 1 Whitelist MALY-DE 0.62 0.21 NA NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 5 107296354 107392384 1 1 101 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 15.81 0.05 99.83 0 1 2 Whitelist MALY-DE 0.62 0.09 NA NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 6 92595904 147637184 1 2 101 2 0 0 0 0 0.11 0.53 3 0 0 NA NA NA NA NA NA 15.81 0.05 99.81 0 2 1 Whitelist MALY-DE 0.54 0.76 0 0 0.48 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 7 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 8 24014460 70528339 1 1 101 0 0 0 1 0 0.39 0.49 2 0 NA NA NA NA NA NA NA 15.81 68.21 31.78 0 2 3 Whitelist MALY-DE 0.62 0.74 0 NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 9 2435903 130371802 40 40 101 8 10 12 10 0 0.85 0 64 0 0 64 5 7 65 5 5 15.81 72.03 25.34 0 2 3 Whitelist MALY-DE 0.91 0 0 0 0.89 1 Low confidence MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL With other complex events 80 0.4 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 10 NA NA 0 0 101 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.26 NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 11 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 12 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 13 30696474 74531630 1 2 101 2 0 0 0 0 0.11 0.59 4 NA 0 4 4 4 5 5 5 15.81 0.73 99.27 0 1 2 Whitelist MALY-DE 0.54 0.81 NA 0 0.48 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 14 106055605 106326780 1 1 101 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 15.81 0.7 98.79 0 1 4 Whitelist MALY-DE 0.62 0.63 NA NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 15 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 16 10964731 73134018 1 3 101 2 1 0 0 0 0.3 0.75 6 0.07 0 6 3 6 7 3 3 15.81 5.12 94.87 0 2 1 Whitelist MALY-DE 0.62 0.92 0.07 0 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 17 73302790 73318335 1 1 101 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 15.81 0 99.95 0 2 NA Whitelist MALY-DE 0.62 0.76 NA NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 18 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 19 11710100 28359979 8 8 101 2 3 1 2 0 0.8 0 8 0 0 8 4 8 13 5 5 15.81 24.29 68.44 0 3 2 Whitelist MALY-DE 0.87 0 0 0 0.84 1 Low confidence MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL With other complex events 16 0.08 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 20 NA NA 0 0 101 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 21 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 22 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4120193 X 113954573 113981203 1 1 101 1 0 0 0 0 0.39 0.65 1 0 NA NA NA NA NA NA NA 15.81 53.9 45.87 0 3 NA Whitelist MALY-DE 0.62 0.86 0 NA 0.59 1 No MALY-DE 4120193 MALY 0.47 2.12 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:2 2 MALY-DE DO27851 4120193 female alive C83.3 other therapy complete response 41 2551 2551 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 83.91 MALY-DE::4121361 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 2 89132281 90008163 2 2 9 0 0 1 1 0 0.57 0.17 3 NA 0 NA NA NA 4 3 4 12.91 36.99 60.11 0 1 2 Whitelist MALY-DE 0.68 0.39 NA 0 0.64 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 4 0.22 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 5 NA NA 0 0 9 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.69 NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 14 106095153 106323186 3 3 9 2 0 0 1 0 0.3 0 3 0 0 NA NA NA 4 4 4 12.91 0.17 83.93 0 2 0 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 6 0.33 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 18 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4121361 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4121361 MALY 0.36 2.14 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27801 4121361 male alive C82.0 other therapy complete response 74 123 123 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.05 MALY-DE::4124188 1 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 2 143597464 173252228 1 1 12 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.19 12.19 87.71 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 4 150753924 150783962 1 1 12 0 1 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 6.19 0 99.98 0 2 NA Whitelist MALY-DE 0.62 0.79 NA NA 0.59 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 6 NA NA 0 0 12 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.37 NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 7 NA NA 0 0 12 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.73 NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 10 82133234 82158085 1 1 12 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 6.19 0 99.89 0 2 NA Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 12 45638532 45814896 1 1 12 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 6.19 0.13 99.79 0 2 3 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 14 106056252 106382690 1 3 12 3 0 0 0 0 0.03 0 2 0 0 NA NA NA NA NA NA 6.19 0.25 98.85 0 1 2 Whitelist MALY-DE 0.41 0 0 0 0.33 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 6 0.25 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124188 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124188 MALY 0.76 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221123 4124188 male alive C83.3 other therapy complete response 73 300 300 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.87 MALY-DE::4124542 1 NA NA 0 0 10 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.78 NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 2 32887286 41443172 1 1 10 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 6 3 5 0.32 3.68 93.64 0 1 2 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 2 0.1 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 6 157350164 157457584 1 1 10 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 0.32 0.06 99.67 0 0 2 Whitelist MALY-DE 0.62 0.71 NA NA 0.59 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 2 0.1 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 7 83306467 83323403 1 1 10 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 0.32 0.01 99.76 0 1 2 Whitelist MALY-DE 0.62 0.26 NA NA 0.59 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 2 0.1 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 12 110929802 111185221 1 1 10 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 0.32 0.19 99.73 0 1 2 Whitelist MALY-DE 0.62 0.63 NA NA 0.59 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 2 0.1 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 14 106068418 106114006 1 1 10 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 0 3 0.32 0.28 96.01 0 0 1 Whitelist MALY-DE 0.62 0 0 NA 0.59 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 2 0.1 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 18 NA NA 0 0 10 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.11 NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4124542 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4124542 MALY 0.25 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52694 4124542 female alive C82.0 other therapy complete response 72 2718 2718 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 89.41 MALY-DE::4125240 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 2 89132279 89161440 1 1 11 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 0 4 6.82 0.56 96.75 0 1 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 2 0.09 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 3 NA NA 0 0 11 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.78 NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 7 101717057 112139312 1 5 11 2 0 0 0 3 0.11 0 3 0 0 NA NA NA 4 3 3 6.82 32.69 67.05 0 1 2 Whitelist MALY-DE 0.62 0 0 0 0.48 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 7 0.32 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 8 123992856 140198418 1 5 11 0 1 0 0 4 0.39 0 1 0 0 NA NA NA NA NA NA 6.82 0 99.99 0 2 NA Whitelist MALY-DE 0.68 0 0 0 0.59 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 6 0.27 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 14 106330847 106877620 1 1 11 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 6.82 0.51 99.05 0 1 NA Whitelist MALY-DE 0.62 0.02 NA NA 0.59 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 2 0.09 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4125240 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4125240 MALY 0.78 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578204_C_A,CN:2 2 MALY-DE DO27765 4125240 male alive C83.7 other therapy complete response 4 814 814 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 26.78 MALY-DE::4127766 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 2 48053978 48065726 1 1 6 0 1 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 5.54 0 99.89 0 2 NA Whitelist MALY-DE 0.62 0.24 NA NA 0.59 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 2 0.17 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 8 128691411 128889561 1 1 6 0 0 0 1 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 5.54 12.07 87.92 0 3 4 Whitelist MALY-DE 0.62 0.12 NA NA 0.59 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 2 0.17 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 14 22918117 106967053 1 3 6 2 0 0 0 1 0.11 0 2 NA 0 NA NA NA NA NA NA 5.54 0.62 99.02 0 1 2 Whitelist MALY-DE 0.62 0 NA 0 0.48 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 5 0.42 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4127766 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4127766 MALY 0.91 1.94 Lymph-BNHL NA 0 0 frameshift_deletion,17_7577086_-_TG,CN:2 2 MALY-DE DO27829 4127766 male alive C83.7 other therapy complete response 8 1349 1349 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.38 MALY-DE::4128477 1 23889310 28118768 2 2 17 0 0 1 1 0 0.57 0.14 3 0.14 0 NA NA NA 6 6 6 24.71 8.39 91.6 0 2 1 Whitelist MALY-DE 0.68 0.34 0.14 0 0.64 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 4 0.12 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 5 22432203 117422386 1 2 17 1 1 0 0 0 0.57 0.29 4 NA 0 4 3 4 5 3 3 24.71 0.41 99.46 0 2 1 Whitelist MALY-DE 0.68 0.53 NA 0 0.64 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 4 0.12 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 6 32248297 33190447 1 1 17 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 24.71 61.8 38.06 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 2 0.06 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 7 NA NA 0 0 17 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.82 NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 8 2673887 2792917 1 1 17 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 24.71 99.99 0 0 3 4 Whitelist MALY-DE 0.62 0.17 NA NA 0.59 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 2 0.06 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 13 93348277 93414560 1 1 17 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 24.71 0 100 0 2 NA Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 2 0.06 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 14 106113527 106326825 1 1 17 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 5 3 5 24.71 17.36 79.26 0 1 NA Whitelist MALY-DE 0.62 0.01 0 NA 0.59 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 2 0.06 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 15 NA NA 0 0 17 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.63 NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 16 NA NA 0 0 17 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.05 NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 18 NA NA 0 0 17 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.22 NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 20 33389902 33412454 1 1 17 1 0 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 24.71 0 99.02 0 2 NA Whitelist MALY-DE 0.62 0.56 NA NA 0.59 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 2 0.06 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128477 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128477 MALY 0.56 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52681 4128477 male alive C82.0 other therapy partial response 54 2892 2892 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 95.13 MALY-DE::4128852 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 3 60423256 60777565 1 2 20 2 0 0 0 0 0.11 0.65 4 NA 0 4 4 4 7 7 7 12.71 2.49 97.46 0 1 2 Whitelist MALY-DE 0.54 0.86 NA 0 0.48 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 4 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 6 NA NA 0 0 20 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.03 NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 8 6693996 42947783 1 1 20 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.71 24.77 71.7 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 9 21828514 23429439 2 2 20 2 0 0 0 0 0.11 0.04 3 0 0 NA NA NA 6 3 5 12.71 1.28 98.05 0 0 1 Whitelist MALY-DE 0.54 0.14 0 0 0.48 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 10 119448874 124021551 1 4 20 2 0 0 0 2 0.11 0 6 0 0 6 6 6 8 8 8 12.71 10.15 89.73 0 1 2 Whitelist MALY-DE 0.68 0 0 0 0.48 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 6 0.15 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 11 NA NA 0 0 20 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.83 NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 12 12039245 12139299 1 1 20 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 12.71 0.07 99.84 0 1 2 Whitelist MALY-DE 0.62 0.48 NA NA 0.59 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 14 22918116 22995815 1 1 20 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 4 4 4 12.71 0.3 99.01 0 1 2 Whitelist MALY-DE 0.62 0.72 NA NA 0.59 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 19 6560656 6594906 1 1 20 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 4 3 3 12.71 51.69 41.03 0 1 2 Whitelist MALY-DE 0.62 0.58 NA NA 0.59 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 22 25660715 25917792 1 1 20 1 0 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 12.71 0 100 0 2 NA Whitelist MALY-DE 0.62 0.44 NA NA 0.59 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4128852 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4128852 MALY 0.57 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO221129 4128852 female alive C83.3 other therapy complete response 57 142 142 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.67 MALY-DE::4130003 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 2 89160437 90061007 1 2 8 1 0 0 1 0 0.57 0.14 2 NA 0 NA NA NA NA NA NA 4.99 0.14 99.75 0 1 2 Whitelist MALY-DE 0.68 0.34 NA 0 0.64 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 4 0.25 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 8 NA NA 0 0 8 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.59 NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 14 106147973 106877617 3 3 8 1 0 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 4.99 0 99.56 1 2 NA Whitelist MALY-DE 0.87 0.01 0 0 0.84 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 6 0.38 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 22 22385871 23247201 1 2 8 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA 4 0 3 4.99 1.66 98.34 0 0 1 Whitelist MALY-DE 0.54 0 NA 0 0.48 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 4 0.25 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4130003 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4130003 MALY 0.97 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27791 4130003 male alive C83.7 other therapy complete response 6 955 955 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 31.41 MALY-DE::4131095 1 188714838 188758140 1 1 23 0 1 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 0.75 2.79 97.21 0 2 NA Whitelist MALY-DE 0.62 0.67 NA NA 0.59 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 2 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 3 117515058 117532726 1 1 23 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 0.75 0 99.95 0 2 NA Whitelist MALY-DE 0.62 0.45 NA NA 0.59 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 4 NA NA 0 0 23 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.02 0 NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 5 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 6 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 7 NA NA 0 0 23 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.61 NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 8 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 9 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 10 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 11 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 12 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 13 35526427 35539157 1 1 23 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 0.75 0 99.88 0 2 NA Whitelist MALY-DE 0.62 0.41 NA NA 0.59 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 14 106055706 106326745 3 4 23 1 0 2 0 1 0.3 0 5 0 0 5 4 5 5 4 5 0.75 0.44 98.9 0 1 2 Whitelist MALY-DE 0.68 0 0 0 0.59 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 7 0.15 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 16 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 17 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 18 NA NA 0 0 23 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.71 NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 19 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131095 X 79503210 79528840 1 1 23 0 1 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 0.75 0 99.78 0 2 NA Whitelist MALY-DE 0.62 0.58 NA NA 0.59 0 No MALY-DE 4131095 MALY 0.32 2 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52682 4131095 female alive C85.1 other therapy stable disease 56 576 576 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 18.95 MALY-DE::4131257 1 76466664 164989531 6 6 60 2 1 2 1 0 0.88 0.14 15 0 0 15 7 7 18 7 7 16.24 11.87 85.11 0 2 4 Whitelist MALY-DE 0.93 0.34 0 0 0.91 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 12 0.1 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 2 89132263 183672197 1 4 60 2 2 0 0 0 0.26 0.35 5 0 0 5 3 5 5 3 3 16.24 0.1 99.8 0 2 1 Whitelist MALY-DE 0.62 0.6 0 0 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 8 0.07 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 3 58148520 95048876 1 2 60 1 1 0 0 0 0.57 0.8 6 NA 0 6 5 6 7 5 5 16.24 0.7 96.22 1 2 1 Whitelist MALY-DE 0.68 0.95 NA 0 0.64 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 4 135650902 136042615 1 1 60 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 16.24 0.2 99.78 0 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 5 27662366 105149487 1 2 60 2 0 0 0 0 0.11 0.59 3 NA 0 NA NA NA NA NA NA 16.24 0.04 99.83 0 2 1 Whitelist MALY-DE 0.54 0.81 NA 0 0.48 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 6 75918812 76306656 3 3 60 2 1 0 0 0 0.3 0.01 3 0 0 NA NA NA 15 10 10 16.24 60.21 39.64 0 1 0 Whitelist MALY-DE 0.62 0.04 0 0 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 6 0.05 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 7 63472885 88052048 1 3 60 1 1 0 0 1 0.57 0.56 3 0 0 NA NA NA NA NA NA 16.24 0.32 99.45 0 2 1 Whitelist MALY-DE 0.87 0.79 0 0 0.64 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 5 0.04 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 8 NA NA 0 0 60 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.93 NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 9 90501509 114110791 6 6 60 0 2 2 2 0 0.57 0 1 0 0 NA NA NA 5 3 3 16.24 1.07 98.23 0 2 NA Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 12 0.1 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 10 NA NA 0 0 60 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 11 57836657 81190452 3 4 60 0 2 1 0 1 0.3 0.36 3 0 0 NA NA NA NA NA NA 16.24 0.37 99.2 0 2 1 Whitelist MALY-DE 0.62 0.62 0 0 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 7 0.06 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 12 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 13 NA NA 0 0 60 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 14 106329467 106346894 1 1 60 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 3 3 16.24 1.47 95.23 0 2 4 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 15 42554668 42588915 1 1 60 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 16.24 0 100 0 2 NA Whitelist MALY-DE 0.62 0.88 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 16 9521716 11255168 1 1 60 1 0 0 0 0 0.39 0.68 2 NA NA NA NA NA 5 5 5 16.24 2.13 93.07 0 1 2 Whitelist MALY-DE 0.62 0.88 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 17 7264495 8078648 1 1 60 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.24 1 98.99 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 19 19041350 34928172 1 2 60 2 0 0 0 0 0.11 0.33 2 NA 0 NA NA NA NA NA NA 16.24 0.53 99.3 0 1 2 Whitelist MALY-DE 0.54 0.58 NA 0 0.48 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 20 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4131257 X 77839669 77857782 1 1 60 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 16.24 99.99 0.01 0 1 2 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4131257 MALY 0.5 1.99 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO27783 4131257 male alive C83.3 other therapy partial response 72 783 783 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 25.76 MALY-DE::4133263 1 NA NA 0 0 59 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.25 NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 2 89132285 89533666 1 1 59 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 14.26 0.17 96.74 0 1 2 Whitelist MALY-DE 0.62 0.73 NA NA 0.59 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 3 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 4 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 5 61477738 61706900 1 1 59 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 14.26 0.13 99.74 0 2 3 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 6 159169195 159192246 1 1 59 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 14.26 0 99.85 0 2 NA Whitelist MALY-DE 0.62 0.51 NA NA 0.59 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 7 111147808 142494250 1 2 59 1 1 0 0 0 0.57 0.77 4 NA 0 4 3 4 5 3 3 14.26 99.73 0.04 0 3 2 Whitelist MALY-DE 0.68 0.93 NA 0 0.64 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 8 97183053 107693408 4 4 59 1 0 1 2 0 0.57 0 5 0 0 5 3 5 37 3 3 14.26 36.86 63.13 0 5 7 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 8 0.07 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 9 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 11 62705298 105757501 1 3 59 2 0 1 0 0 0.3 0 6 0 0 6 3 5 12 3 5 14.26 44.02 55.55 0 4 2 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 6 0.05 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 12 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 14 106094405 106351898 1 4 59 1 0 0 1 2 0.57 0.04 2 0 0 NA NA NA NA NA NA 14.26 0.52 99.05 0 1 2 Whitelist MALY-DE 0.68 0.13 0 0 0.64 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 6 0.05 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 16 11329276 79060803 1 2 59 2 0 0 0 0 0.11 0.67 4 NA 0 4 4 4 5 5 5 14.26 0.59 99.3 0 1 2 Whitelist MALY-DE 0.54 0.87 NA 0 0.48 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 17 3681866 18049281 3 4 59 1 0 1 1 1 0.8 0.01 4 0 0 4 4 4 8 4 4 14.26 38.9 61.1 0 1 2 Whitelist MALY-DE 0.68 0.03 0 0 0.84 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 7 0.06 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 22 23029743 23263574 1 2 59 2 0 0 0 0 0.11 0.16 2 NA 0 NA NA NA 4 0 3 14.26 1.72 98.28 0 0 2 Whitelist MALY-DE 0.54 0.36 NA 0 0.48 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 4 0.03 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133263 X NA NA 0 0 59 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.62 NA NA NA 0 No MALY-DE 4133263 MALY 0.69 2.19 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52661 4133263 male alive C83.3 other therapy complete response 40 1361 1361 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 44.77 MALY-DE::4133511 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 2 38138177 53596889 3 3 33 0 1 1 1 0 0.8 0.75 6 0 0 6 6 6 9 9 9 12.03 4.77 95.13 0 1 2 Whitelist MALY-DE 0.87 0.92 0 0 0.84 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 6 0.09 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 3 NA NA 0 0 33 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 4 144379556 154704427 1 2 33 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 12.03 1.12 98.87 0 1 2 Whitelist MALY-DE 0.54 1 NA 0 0.48 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 4 0.06 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 6 NA NA 0 0 33 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 7 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 8 NA NA 0 0 33 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.88 NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 9 NA NA 0 0 33 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.33 NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 13 64436002 110393802 8 13 33 2 1 3 2 5 0.8 0 19 0 0 19 5 10 20 5 10 12.03 29.31 70.69 0 4 3 Whitelist MALY-DE 0.9 0 0 0 0.84 0 Low confidence MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL With other complex events 21 0.32 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 14 106330905 106725201 1 1 33 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 12.03 0.37 99.05 0 4 NA Whitelist MALY-DE 0.62 0.24 NA NA 0.59 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 17 3759916 7889692 1 1 33 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 12.03 5.09 94.9 0 1 2 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 22 23101539 23236098 1 1 33 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 12.03 0.26 99.74 0 1 2 Whitelist MALY-DE 0.62 0.58 NA NA 0.59 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4133511 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4133511 MALY 0.81 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578280_A_G,CN:1 2 MALY-DE DO27819 4133511 male alive C83.7 other therapy complete response 5 2189 2189 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 72.01 MALY-DE::4134005 1 2317196 32400207 1 2 19 2 0 0 0 0 0.11 0.66 4 NA 0.04 4 4 4 5 5 5 10.67 1.18 98.82 0 1 2 Whitelist MALY-DE 0.54 0.87 NA 0.04 0.48 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 4 0.11 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 2 54404123 55043112 1 2 19 1 0 1 0 0 0.57 0.07 2 0 0 NA NA NA 7 7 7 10.67 0.23 99.67 0 1 2 Whitelist MALY-DE 0.68 0.21 0 0 0.64 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 4 0.11 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 6 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 7 94177363 153188770 1 4 19 1 1 0 1 1 0.8 0 3 0 0 NA NA NA 4 3 3 10.67 64.99 34.78 1 2 1 Whitelist MALY-DE 0.68 0 0 0 0.84 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 7 0.18 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 8 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 13 NA NA 0 0 19 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.02 NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 14 106212109 106326660 1 1 19 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 4 10.67 0.61 83.83 0 0 2 Whitelist MALY-DE 0.62 0.08 NA NA 0.59 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 18 27492374 28309563 1 1 19 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 10.67 1.05 98.92 0 2 3 Whitelist MALY-DE 0.62 0.06 NA NA 0.59 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134005 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4134005 MALY 0.78 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27803 4134005 male alive C82.0 other therapy partial response 67 496 496 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.32 MALY-DE::4134434 1 72008571 200073394 13 29 88 0 5 3 5 16 0.16 0 33 0 0 33 27 33 36 27 34 77.81 65.41 34.59 0 2 4 Whitelist MALY-DE 5 0.88 0 0 0 0.59 1 High confidence MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL Before polyploidization 42 0.24 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 2 89160440 122623149 1 2 88 1 0 1 0 0 0.57 0.33 7 0 0 7 3 5 16 4 4 77.81 73.34 23.97 2 4 0 Whitelist MALY-DE 0.68 0.58 0 0 0.64 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 3 187386022 189937704 1 3 88 1 0 0 0 2 0.39 0 2 0 0 NA NA NA 14 6 9 77.81 96.09 3.86 0 2 3 Whitelist MALY-DE 0.62 0.01 0 0 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 4 NA NA 0 0 88 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.11 NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 5 99083900 158291677 1 12 88 2 0 1 0 9 0.3 0 11 0 0 11 11 11 21 21 21 77.81 94.86 5.02 0 2 4 Whitelist MALY-DE 1 0.68 0 0 0 0.59 1 Linked to high confidence MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL Before polyploidization 15 0.09 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 6 48761161 167136775 1 3 88 3 0 0 0 0 0.03 1 7 0 0 7 3 5 8 4 5 77.81 80.29 19.56 0 3 1 Whitelist MALY-DE 0.41 1 0 0 0.33 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 7 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 8 NA NA 0 0 88 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.33 NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 9 37216585 37318797 1 1 88 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 77.81 99.79 0.07 0 2 4 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 10 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 11 15511788 111158811 1 3 88 2 1 0 0 0 0.3 1 3 0 0 NA NA NA 5 4 5 77.81 99.57 0 0 4 6 Whitelist MALY-DE 0.62 1 0 0 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 12 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 13 NA NA 0 0 88 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 14 91749133 91786481 1 1 88 1 0 0 0 0 0.39 0.06 1 0 NA NA NA NA 4 3 3 77.81 96.29 0 0 3 NA Whitelist MALY-DE 0.62 0.18 0 NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 15 79207167 79246082 1 1 88 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 77.81 95.04 0 0 4 NA Whitelist MALY-DE 0.62 0.76 NA NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 16 89326126 89509449 1 1 88 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 77.81 98.97 0 0 3 NA Whitelist MALY-DE 0.62 0.91 NA NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 17 NA NA 0 0 88 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 18 NA NA 0 0 88 0 0 0 0 0 NA 0.3 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.55 0 NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 19 48895152 55761731 1 2 88 2 0 0 0 0 0.11 0.69 4 NA 0 4 4 4 5 5 5 77.81 98.19 1.64 0 2 4 Whitelist MALY-DE 0.54 0.89 NA 0 0.48 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 20 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 21 32182989 32238160 1 1 88 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.81 77.24 0.11 0 2 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 22 49894178 49926486 1 1 88 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 4 4 77.81 54.66 45.34 0 2 3 Whitelist MALY-DE 0.62 0.25 NA NA 0.59 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4134434 X 32864365 140970957 1 2 88 2 0 0 0 0 0.11 1 5 0 0 5 4 5 6 4 5 77.81 63.96 35.95 0 1 2 Whitelist MALY-DE 0.54 1 0 0 0.48 1 No MALY-DE 4134434 MALY 0.82 3.31 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577574_G_T,CN:2 3 MALY-DE DO52650 4134434 male alive C83.3 other therapy partial response 84 128 128 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 4.21 MALY-DE::4135099 1 1563247 89014486 13 13 297 3 5 3 2 0 0.69 0.16 28 0 0 28 5 13 43 7 14 19.96 38.63 61.36 0 1 2 Whitelist MALY-DE 0.8 0.37 0 0 0.77 0 Low confidence MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL With other complex events 26 0.04 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 2 53389576 199251373 1 7 297 7 0 0 0 0 0 0.01 12 0 0 12 12 12 13 13 13 19.96 5.61 91.71 0 1 2 Whitelist MALY-DE 0.02 0.05 0 0 0.01 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 14 0.02 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 3 96005867 96459406 3 3 297 0 1 1 1 0 0.8 0.02 1 0 0 NA NA NA 15 15 15 19.96 13.81 86.07 0 2 NA Whitelist MALY-DE 0.87 0.07 0 0 0.84 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 6 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 4 2735820 190587393 1 15 297 13 0 0 0 2 0 0.91 17 0 0 17 13 17 18 13 13 19.96 9.5 87.89 0 2 1 Whitelist MALY-DE 0 1 0 0 0 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 28 0.05 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 5 46300520 61854096 2 4 297 0 0 2 2 0 0.26 0.72 7 0 0 7 7 7 15 11 11 19.96 0.27 96.82 0 2 1 Whitelist MALY-DE 0.62 0.9 0 0 0.59 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 8 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 6 40247540 164332119 1 12 297 6 4 0 0 2 0.01 0.46 9 0 0 9 4 9 10 4 4 19.96 63.74 36.02 0 1 2 Whitelist MALY-DE 1 0.54 0.71 0 0 0.23 0 Linked to low confidence MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL With other complex events 22 0.04 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 7 41843183 42034704 2 2 297 1 0 0 1 0 0.57 0.04 2 0 0 NA NA NA 7 7 7 19.96 0.17 99.6 0 1 2 Whitelist MALY-DE 0.68 0.13 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 8 78208667 105496263 2 2 297 0 0 1 1 0 0.57 1 4 0 0 4 4 4 21 8 8 19.96 41.36 54.67 0 1 2 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 9 72933260 73956731 1 2 297 2 0 0 0 0 0.11 0.37 1 0 0 NA NA NA 5 5 5 19.96 1.36 98.44 0 2 NA Whitelist MALY-DE 0.54 0.62 0 0 0.48 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 10 38213077 50169085 1 3 297 2 0 1 0 0 0.3 0.58 7 0 0 7 7 7 7 7 7 19.96 0.03 99.8 0 2 1 Whitelist MALY-DE 0.62 0.8 0 0 0.59 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 6 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 11 59255277 59633457 2 2 297 1 0 1 0 0 0.57 0.17 3 0 0 NA NA NA 13 13 13 19.96 11.47 84.44 0 2 1 Whitelist MALY-DE 0.68 0.38 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 12 25449786 25856140 2 2 297 0 0 1 1 0 0.57 0.68 1 0 0 NA NA NA 5 3 3 19.96 24.87 71.31 0 1 NA Whitelist MALY-DE 0.68 0.88 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 13 29002896 78873345 5 5 297 4 1 0 0 0 0.04 0.42 3 0 0 NA NA NA 5 5 5 19.96 43.64 42.21 0 2 1 Whitelist MALY-DE 0.45 0.67 0 0 0.36 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 10 0.02 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 14 21687214 106240960 1 6 297 1 1 2 1 1 0.9 0.51 8 0 0 8 8 8 8 8 8 19.96 9.31 75.47 3 1 2 Whitelist MALY-DE 0.93 0.75 0 0 0.92 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 11 0.02 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 15 27655275 63756635 1 8 297 4 3 0 0 1 0.06 0.29 11 0 0 11 5 11 11 5 5 19.96 0.52 84.07 2 2 1 Whitelist MALY-DE 0.41 0.53 0 0 0.48 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 15 0.03 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 16 11628222 58338928 1 4 297 2 1 0 1 0 0.57 0.2 8 0 0 8 7 8 9 7 7 19.96 22.1 73.46 0 2 1 Whitelist MALY-DE 0.68 0.43 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 8 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 17 62959740 63061788 2 2 297 2 0 0 0 0 0.11 0.15 2 0 0 NA NA NA 13 6 6 19.96 8.53 87.02 0 1 2 Whitelist MALY-DE 0.54 0.35 0 0 0.48 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 18 19361782 20039987 2 2 297 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA 9 7 7 19.96 13.96 86 8 2 NA Whitelist MALY-DE 0.68 0.35 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 19 24366822 38437170 3 3 297 1 0 1 1 0 0.8 0 10 0 0 10 8 10 26 11 11 19.96 35.84 56.88 0 1 2 Whitelist MALY-DE 0.87 0 0 0 0.84 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 6 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 20 12293760 47901250 1 7 297 5 0 1 1 0 0.04 0.69 7 0 0 7 7 7 7 7 7 19.96 0.35 91.38 0 2 1 Whitelist MALY-DE 0.47 0.89 0 0 0.38 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 14 0.02 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 21 20146533 33896499 1 2 297 1 1 0 0 0 0.57 0.42 2 0 0 NA NA NA 5 3 5 19.96 69.99 0.15 0 2 3 Whitelist MALY-DE 0.68 0.67 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 22 23654149 45722587 1 2 297 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 3 19.96 0.4 75.82 0 2 1 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 4 0.01 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135099 X 30101135 53918224 6 6 297 0 2 3 1 0 0.34 0.59 7 0 0 7 7 7 11 11 11 19.96 61.75 38.25 0 1 2 Whitelist MALY-DE 0.62 0.81 0 0 0.59 0 No MALY-DE 4135099 MALY 0.79 1.91 Lymph-BNHL NA 12 0.02 NA 2 MALY-DE DO27811 4135099 male alive C83.3 other therapy partial response 49 596 596 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.61 MALY-DE::4135350 1 150418885 150673930 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.34 0.1 99.9 0 2 4 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 2 89161078 89197287 1 1 21 0 1 0 0 0 0.39 0.03 1 0 NA NA NA NA 5 5 5 12.34 0.14 99.77 0 1 NA Whitelist MALY-DE 0.62 0.1 0 NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 3 6181124 6201812 1 1 21 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 12.34 0.01 99.87 0 1 2 Whitelist MALY-DE 0.62 0.86 NA NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 4 79070314 104125303 1 2 21 1 1 0 0 0 0.57 0.65 4 NA 0 4 3 4 5 3 3 12.34 8.4 91.58 0 2 1 Whitelist MALY-DE 0.68 0.86 NA 0 0.64 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 6 41862796 118091574 1 2 21 1 1 0 0 0 0.57 0.36 4 NA 0 4 3 4 5 3 3 12.34 25.4 74.45 0 2 1 Whitelist MALY-DE 0.68 0.62 NA 0 0.64 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 12 47340562 47382093 1 1 21 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 7 3 5 12.34 3.42 96.5 0 3 5 Whitelist MALY-DE 0.62 0.06 0 NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 13 NA NA 0 0 21 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0.37 NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 14 106330467 106494149 1 1 21 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 12.34 0.15 99.05 0 3 NA Whitelist MALY-DE 0.62 0.73 NA NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 15 94586386 94854713 1 1 21 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 12.34 0 100 0 2 NA Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 18 NA NA 0 0 21 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 20 14517195 14598735 1 1 21 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 12.34 0.13 98.88 0 2 3 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4135350 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4135350 MALY 0.91 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27771 4135350 male alive C85.1 other therapy complete response 8 1553 1553 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 51.09 MALY-DE::4136702 1 156966506 158232598 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 9.91 30.44 69.55 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 2 56856088 67971446 1 2 21 0 1 1 0 0 0.57 0.42 4 0 0 4 3 4 7 3 3 9.91 4.73 95.16 0 3 2 Whitelist MALY-DE 0.68 0.66 0 0 0.64 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 5 27499350 88318183 1 2 21 2 0 0 0 0 0.11 0.38 4 NA 0 4 4 4 5 5 5 9.91 0.69 99.19 0 1 2 Whitelist MALY-DE 0.54 0.63 NA 0 0.48 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 10 81808733 119715535 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.91 27.97 71.92 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 12 6264634 116766596 1 2 21 1 1 0 0 0 0.57 0.26 4 NA 0.04 4 3 4 5 3 3 9.91 0.89 99.03 0 2 1 Whitelist MALY-DE 0.68 0.5 NA 0.04 0.64 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 13 67118976 86701611 1 2 21 2 0 0 0 0 0.11 0.16 4 NA 0 4 4 4 5 5 5 9.91 0.39 99.61 0 1 2 Whitelist MALY-DE 0.54 0.37 NA 0 0.48 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 4 0.1 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 14 106330472 106357577 1 1 21 0 0 0 1 0 0.39 0 1 0 NA NA NA NA NA NA NA 9.91 0 99.08 1 2 NA Whitelist MALY-DE 0.62 0 0 NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 15 41075520 45072388 1 1 21 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 9.91 3.9 95.97 0 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 16 10567104 10995589 1 1 21 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 9.91 0.47 99.42 0 1 2 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 17 46314826 65596335 1 1 21 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 9.91 23.75 76.25 0 2 3 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 18 NA NA 0 0 21 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4136702 X 33904964 33940139 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.91 0.02 99.76 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4136702 MALY 0.8 2.07 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO52652 4136702 female alive C82.3 other therapy complete response 75 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.75 MALY-DE::4138527 1 16292300 16394891 2 2 187 1 1 0 0 0 0.57 0.08 2 0 0 NA NA NA 7 4 4 11.58 5.76 94.24 0 1 2 Whitelist MALY-DE 0.68 0.22 0 0 0.64 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 2 218411624 238821854 2 4 187 0 0 2 2 0 0.26 0.69 3 0 0 NA NA NA 13 13 13 11.58 0.71 96.42 0 2 1 Whitelist MALY-DE 0.62 0.89 0 0 0.59 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 8 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 3 8793039 152850992 1 7 187 6 1 0 0 0 0 0.67 4 0 0 4 3 4 5 3 3 11.58 0.17 99.78 0 2 1 Whitelist MALY-DE 0.13 0.87 0 0 0.09 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 14 0.04 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 4 15573682 189567466 1 9 187 6 0 1 0 2 0 0.88 7 0 0 7 7 7 7 7 7 11.58 0.12 99.86 1 2 1 Whitelist MALY-DE 0.15 1 0 0 0.09 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 16 0.04 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 5 73997977 179647075 1 4 187 4 0 0 0 0 0.01 0.36 7 0 0 7 7 7 7 7 7 11.58 0.12 99.75 0 2 1 Whitelist MALY-DE 0.21 0.62 0 0 0.16 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 8 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 6 156402942 165510569 8 8 187 1 1 2 4 0 0.39 0.36 5 0 0 5 3 5 9 6 9 11.58 5.39 94.47 0 1 2 Whitelist MALY-DE 0.62 0.61 0 0 0.59 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 16 0.04 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 7 43613836 91101290 1 2 187 2 0 0 0 0 0.11 0.25 3 0 0 NA NA NA NA NA NA 11.58 0.03 99.75 0 2 1 Whitelist MALY-DE 0.54 0.49 0 0 0.48 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 8 12418791 88376295 1 3 187 3 0 0 0 0 0.03 0.51 7 0 0 7 7 7 7 7 7 11.58 13.31 86.68 0 2 1 Whitelist MALY-DE 0.41 0.75 0 0 0.33 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 6 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 9 35950865 115054027 1 2 187 1 0 1 0 0 0.57 0.26 4 0 0 4 4 4 5 5 5 11.58 0.3 99 0 1 2 Whitelist MALY-DE 0.68 0.5 0 0 0.64 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 10 15783054 128092991 1 5 187 3 0 1 1 0 0.28 0.29 5 0 0 5 5 5 5 5 5 11.58 0.31 99.5 1 2 1 Whitelist MALY-DE 0.62 0.54 0 0 0.59 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 10 0.03 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 11 2282524 4018733 2 2 187 0 0 1 1 0 0.57 0.73 2 0 0 NA NA NA 9 9 9 11.58 3.22 96.35 0 1 2 Whitelist MALY-DE 0.68 0.9 0 0 0.64 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 12 29034275 126423530 1 6 187 6 0 0 0 0 0 0.86 12 0 0 12 3 8 15 5 11 11.58 82.39 17.53 0 3 2 Whitelist MALY-DE 0.04 0.99 0 0 0.03 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 12 0.03 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 13 30136476 91861686 1 6 187 6 0 0 0 0 0 0.54 8 0 0 8 8 8 9 9 9 11.58 18.75 81.25 0 1 2 Whitelist MALY-DE 0.04 0.77 0 0 0.03 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 12 0.03 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 14 23731551 106326510 1 8 187 6 0 0 0 2 0 0.05 5 0 0 5 5 5 8 8 8 11.58 1.68 94.91 0 1 2 Whitelist MALY-DE 5 0.28 0.17 0 0 0.03 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 14 0.04 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 15 52505861 89984654 1 3 187 3 0 0 0 0 0.03 1 7 0 0 7 7 7 7 7 7 11.58 0.55 99.45 0 2 1 Whitelist MALY-DE 0.41 1 0 0 0.33 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 6 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 16 48053477 51323723 7 7 187 1 1 2 3 0 0.67 0 4 0 0 4 4 4 18 7 8 11.58 48.82 46.66 0 0 1 Whitelist MALY-DE 0.77 0 0 0 0.74 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 14 0.04 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 17 62209774 65012188 2 2 187 2 0 0 0 0 0.11 0.36 4 0 0 4 3 4 10 7 7 11.58 30.34 69.61 0 1 0 Whitelist MALY-DE 0.54 0.61 0 0 0.48 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 18 11983039 20609506 2 3 187 0 0 1 1 1 0.57 0.17 4 0 0 4 3 4 10 6 10 11.58 77.33 17.82 0 3 2 Whitelist MALY-DE 0.87 0.38 0 0 0.64 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 5 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 19 6380186 14022553 2 2 187 0 0 1 1 0 0.57 0.01 5 0 0 5 4 5 10 8 8 11.58 16.82 75.91 2 1 2 Whitelist MALY-DE 0.68 0.06 0 0 0.64 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 4 0.01 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 20 9123148 44389996 1 3 187 2 0 0 1 0 0.3 0.61 2 0 0 NA NA NA NA NA NA 11.58 0.19 98.83 0 1 2 Whitelist MALY-DE 0.62 0.82 0 0 0.59 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 6 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 21 10819348 15582054 1 3 187 3 0 0 0 0 0.03 0.08 1 0 0 NA NA NA NA NA NA 11.58 77.52 0 0 3 NA Whitelist MALY-DE 0.41 0.23 0 0 0.33 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 6 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 22 26713927 43649167 1 3 187 3 0 0 0 0 0.03 0.49 3 0 0 NA NA NA 5 5 5 11.58 1.09 98.91 1 2 1 Whitelist MALY-DE 0.41 0.74 0 0 0.33 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 6 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138527 X 1589650 46496047 1 4 187 4 0 0 0 0 0.01 0.87 10 0 0 10 7 10 11 7 11 11.58 0.82 98.95 0 2 0 Whitelist MALY-DE 0.21 1 0 0 0.16 0 No MALY-DE 4138527 MALY 0.72 2.04 Lymph-BNHL NA 8 0.02 nonsynonymous_SNV,17_7577575_T_A,CN:1 3 MALY-DE DO221124 4138527 female deceased C83.3 other therapy partial response 85 374 374 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 12.3 MALY-DE::4138885 1 NA NA 0 0 5 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.59 NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 2 89161074 89197300 1 1 5 0 0 1 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 7.31 0.01 99.89 0 1 2 Whitelist MALY-DE 0.62 0.61 NA NA 0.59 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 2 0.2 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 7 120305680 147612054 1 1 5 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 5 5 5 7.31 17.6 82.18 0 1 2 Whitelist MALY-DE 0.62 0.48 NA NA 0.59 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 2 0.2 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 16 3791664 58847050 1 2 5 1 1 0 0 0 0.57 0.01 1 NA 0.01 NA NA NA 4 4 4 7.31 5.78 94.18 0 2 NA Whitelist MALY-DE 0.68 0.03 NA 0.01 0.64 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 4 0.4 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4138885 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4138885 MALY 0.62 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52676 4138885 female alive C82.0 other therapy complete response 55 1419 1419 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 46.68 MALY-DE::4139696 1 19545470 207217208 1 2 33 0 0 1 0 1 0.39 0.74 4 NA 0 4 4 4 4 4 4 13.54 41.37 58.63 0 2 3 Whitelist MALY-DE 0.68 0.91 NA 0 0.59 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 3 0.05 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 2 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 3 NA NA 0 0 33 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 4 172175721 178144474 7 8 33 1 0 3 3 1 0.28 0 6 0 0 6 6 6 6 6 6 13.54 7.98 91.99 0 1 2 Whitelist MALY-DE 0.68 0.01 0 0 0.59 1 Low confidence MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL Canonical without polyploidization 15 0.23 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 6 18142908 155212520 6 6 33 2 3 0 1 0 0.34 0 15 0 0 15 15 15 15 15 15 13.54 1.83 98.03 0 2 1 Whitelist MALY-DE 0.62 0 0 0 0.59 1 High confidence MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL Canonical without polyploidization 12 0.18 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 7 37693589 37865016 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 13.54 0.11 99.67 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 8 129011836 129044248 1 1 33 0 0 0 1 0 0.39 0.24 2 0 NA NA NA NA 4 0 0 13.54 0.12 99.87 0 4 6 Whitelist MALY-DE 0.62 0.47 0 NA 0.59 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 12 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 14 106331654 106367004 1 1 33 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 13.54 0.62 99.05 0 0 1 Whitelist MALY-DE 0.62 0.52 NA NA 0.59 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 17 NA NA 0 0 33 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.81 NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 19 2383501 18985945 5 5 33 1 1 2 1 0 0.9 0 8 0 0 8 6 8 9 7 9 13.54 3.57 96.26 0 2 1 Whitelist MALY-DE 0.93 0 0 0 0.92 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 10 0.15 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 20 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 21 47551569 47562518 1 1 33 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 13.54 69.11 0 0 3 NA Whitelist MALY-DE 0.62 0.59 NA NA 0.59 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 2 0.03 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4139696 X 39871957 42790601 2 2 33 0 0 1 1 0 0.57 0.68 1 NA 0 NA NA NA NA NA NA 13.54 100 0 0 1 NA Whitelist MALY-DE 0.68 0.88 NA 0 0.64 1 No MALY-DE 4139696 MALY 0.44 2.02 Lymph-BNHL NA 4 0.06 NA 3 MALY-DE DO27849 4139696 male deceased C82.4 other therapy stable disease 70 306 343 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.07 MALY-DE::4142267 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 3 150132822 178736748 1 3 6 1 0 1 1 0 0.8 0.01 3 0 0 NA NA NA NA NA NA 5.45 7.35 92.6 0 2 1 Whitelist MALY-DE 0.87 0.03 0 0 0.84 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 6 0.5 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.51 NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 14 106330470 106350728 1 1 6 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 5.45 0.41 99.07 0 1 2 Whitelist MALY-DE 0.62 0.39 NA NA 0.59 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 2 0.17 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 17 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.35 NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 22 NA NA 0 0 6 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.21 NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142267 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142267 MALY 0.88 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7578513_A_C,CN:2 2 MALY-DE DO27823 4142267 male alive C83.7 other therapy complete response 5 211 211 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.94 MALY-DE::4142605 1 NA NA 0 0 43 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.93 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 2 61075372 61145828 1 2 43 1 1 0 0 0 0.57 0.78 3 0 0 NA NA NA 5 3 5 12.04 0.11 99.8 0 2 3 Whitelist MALY-DE 0.68 0.94 0 0 0.64 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 4 0.05 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 3 170099277 170117647 1 1 43 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 12.04 0.02 99.93 0 2 NA Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 4 26564894 26588721 1 1 43 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 12.04 0 99.99 0 2 NA Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 5 NA NA 0 0 43 0 0 0 0 0 NA 0.05 NA 0.53 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.16 0.53 NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 7 NA NA 0 0 43 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.54 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 8 NA NA 0 0 43 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.73 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 9 20689498 20959880 1 1 43 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA 4 3 3 12.04 23.54 75.76 0 1 2 Whitelist MALY-DE 0.62 0.89 NA NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 10 75417117 76042143 1 1 43 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.04 0.46 99.36 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 11 NA NA 0 0 43 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 12 57347082 57514951 1 1 43 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.04 0 99.92 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 13 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 14 106069785 106326677 2 2 43 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 4 4 4 12.04 0.75 98.55 1 1 2 Whitelist MALY-DE 0.54 0.01 0 0 0.48 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 4 0.05 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 15 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 16 48396115 48895365 1 1 43 1 0 0 0 0 0.39 0.11 2 0.16 NA NA NA NA 6 4 4 12.04 48.43 51.26 0 0 1 Whitelist MALY-DE 0.62 0.28 0.16 NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 17 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 18 NA NA 0 0 43 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.28 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 19 6448572 15626534 1 3 43 3 0 0 0 0 0.03 0 4 0 0 4 3 4 8 3 6 12.04 7.67 85.05 0 2 0 Whitelist MALY-DE 0.41 0.01 0 0 0.33 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 6 0.07 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 21 NA NA 0 0 43 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.26 NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4142605 X 34013120 34026643 1 1 43 0 0 1 0 0 0.39 0.06 1 0 NA NA NA NA NA NA NA 12.04 3.66 96.12 0 2 NA Whitelist MALY-DE 0.62 0.2 0 NA 0.59 0 No MALY-DE 4142605 MALY 0.78 2.06 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52663 4142605 female alive C83.3 other therapy complete response 76 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.72 MALY-DE::4144633 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 6 17615568 73802328 1 1 7 0 0 1 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 71.19 43.11 56.77 0 2 3 Whitelist MALY-DE 0.62 0.6 NA NA 0.59 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 2 0.14 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 7 NA NA 0 0 7 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 8 NA NA 0 0 7 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.15 NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 14 106213467 106326084 2 2 7 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 71.19 99.74 0 0 1 NA Whitelist MALY-DE 0.54 0 0 0 0.48 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 4 0.29 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144633 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4144633 MALY 0.85 3.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52683 4144633 female alive C83.3 other therapy complete response 44 3836 3836 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 126.18 MALY-DE::4144951 1 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 2 58170059 67456432 1 1 103 0 0 1 0 0 0.39 0.01 2 NA 0 NA NA NA 6 3 4 11.53 4.01 92.91 0 2 3 Whitelist MALY-DE 0.62 0.05 NA 0 0.59 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 3 NA NA 0 0 103 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.05 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 4 NA NA 0 0 103 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 5 NA NA 0 0 103 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.2 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 6 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 7 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 8 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 9 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 10 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 11 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 12 97926367 98236364 1 1 103 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 11.53 0.23 99.75 0 1 2 Whitelist MALY-DE 0.62 0.26 NA NA 0.59 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 13 24997688 112761208 77 77 103 18 22 18 19 0 0.91 0 14 0 0 14 7 7 14 7 7 11.53 100 0 0 3 1 Whitelist MALY-DE 0.94 0 0 0 0.93 1 High confidence MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL With other complex events 154 0.75 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 14 NA NA 0 0 103 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.79 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 15 29904028 64386921 1 1 103 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 11.53 33.63 66.37 0 1 2 Whitelist MALY-DE 0.62 0.77 NA NA 0.59 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 16 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 17 NA NA 0 0 103 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 18 NA NA 0 0 103 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.61 NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 19 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 20 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 21 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 22 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4144951 X NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4144951 MALY 0.72 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52685 4144951 female alive C82.0 other therapy complete response 62 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.54 MALY-DE::4145056 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 2 57778216 61999261 1 1 9 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA 7 3 3 10.4 1.87 98.02 0 2 3 Whitelist MALY-DE 0.62 0.77 NA NA 0.59 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 3 61276412 61300360 1 1 9 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 10.4 0.01 99.94 0 1 2 Whitelist MALY-DE 0.62 0.72 NA NA 0.59 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 9 NA NA 0 0 9 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.15 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 14 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 16 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.45 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 18 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.09 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 21 NA NA 0 0 9 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.27 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145056 X NA NA 0 0 9 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.21 NA NA NA 0 No MALY-DE 4145056 MALY 0.67 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52669 4145056 female alive C82.0 other therapy disease progression 67 592 592 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 19.47 MALY-DE::4145177 1 1727046 8960415 13 13 55 4 3 3 3 0 0.97 0 26 0 0 26 26 26 29 29 29 17.38 2.07 97.93 0 1 2 Whitelist MALY-DE 0.99 0 0 0 0.98 1 High confidence MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL Canonical without polyploidization 26 0.24 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 2 89277891 89309479 1 1 55 1 0 0 0 0 0.39 0.63 2 0 NA NA NA NA 6 3 6 17.38 0.01 96.92 1 1 2 Whitelist MALY-DE 0.62 0.84 0 NA 0.59 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 3 98874711 120637964 1 1 55 1 0 0 0 0 0.39 0.44 2 NA 0 NA NA NA NA NA NA 17.38 10.99 88.96 0 1 2 Whitelist MALY-DE 0.62 0.69 NA 0 0.59 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 4 117318954 117429418 1 1 55 0 1 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 17.38 0.06 99.93 0 2 3 Whitelist MALY-DE 0.62 0.4 NA NA 0.59 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 5 NA NA 0 0 55 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.5 NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 6 66913760 66928321 1 1 55 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 17.38 31.8 68.06 2 2 NA Whitelist MALY-DE 0.62 0.93 NA NA 0.59 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 7 NA NA 0 0 55 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.93 NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 8 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 9 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 10 86189361 87499913 2 2 55 0 0 1 1 0 0.57 0.11 1 0 0 NA NA NA NA NA NA 17.38 19.99 79.83 0 1 NA Whitelist MALY-DE 0.68 0.28 0 0 0.64 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 11 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 12 61741531 65232791 2 2 55 1 1 0 0 0 0.57 0.01 3 0 0 NA NA NA 4 4 4 17.38 58.23 41.69 0 3 2 Whitelist MALY-DE 0.68 0.06 0 0 0.64 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 13 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 14 106094193 106325558 3 3 55 3 0 0 0 0 0.03 0 2 0 0 NA NA NA NA NA NA 17.38 0.51 98.94 0 1 2 Whitelist MALY-DE 0.41 0.01 0 0 0.33 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 6 0.05 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 15 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 16 3815901 5039523 1 1 55 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.38 1.35 98.54 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 17 NA NA 0 0 55 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.87 NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 18 NA NA 0 0 55 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 0 NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 20 33135348 60941741 1 2 55 2 0 0 0 0 0.11 0.12 4 0 0 4 4 4 5 5 5 17.38 34.2 64.82 0 1 2 Whitelist MALY-DE 0.54 0.3 0 0 0.48 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145177 X NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4145177 MALY 0.8 2 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52655 4145177 female alive C83.3 other therapy complete response 75 511 511 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.81 MALY-DE::4145528 1 77006091 161744723 5 7 1226 2 3 0 0 2 0.14 0.15 63 0 0 63 13 18 157 14 16 35.78 39.42 60.42 7 3 2 Whitelist MALY-DE 0.77 0.35 0 0 0.59 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 12 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 False positive; manually removed MALY-DE::4145528 2 214757571 215203968 5 5 1226 1 2 1 1 0 0.9 0.54 1 0 0 NA NA NA 164 13 20 35.78 23.05 73.87 1 2 NA Whitelist MALY-DE 0.93 0.77 0 0 0.92 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 10 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 3 111610899 188282688 3 6 1226 0 6 0 0 0 0 0.29 47 0 0 47 12 40 105 22 22 35.78 8.96 90.88 3 2 3 Whitelist MALY-DE 0.04 0.53 0 0 0.03 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 12 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 4 137343292 185113770 7 8 1226 1 2 1 3 1 0.67 0.01 33 0 0 33 14 28 86 29 35 35.78 17.66 82.32 2 3 2 Whitelist MALY-DE 0.87 0.06 0 0 0.74 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 15 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 False positive; manually removed MALY-DE::4145528 5 94679377 140023507 2 6 1226 0 4 0 0 2 0.01 0.18 40 0 0 40 21 23 87 21 23 35.78 43.45 56.42 5 2 3 Whitelist MALY-DE 0.54 0.39 0 0 0.16 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 10 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 6 3338751 33156964 8 18 1226 2 6 0 0 10 0.01 0.12 39 0 0 39 9 18 119 16 16 35.78 13.62 83.55 1 3 4 Whitelist MALY-DE 11_22_3 0.41 0.3 0 0 0.16 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 26 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 7 129473211 130056958 4 5 1226 2 1 0 1 1 0.57 0.25 7 0 0 7 3 6 116 10 10 35.78 50.38 46.87 1 1 2 Whitelist MALY-DE 0.93 0.5 0 0 0.64 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 9 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 8 3116649 136165687 2 18 1226 1 9 1 1 6 0 0.9 89 0 0 89 20 57 93 20 20 35.78 97.87 2.12 14 4 3 Whitelist MALY-DE 1 0.16 1 0 0 0.06 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 30 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 9 5516054 7901888 2 2 1226 0 2 0 0 0 0.11 0.51 4 0 0 4 0 3 61 17 17 35.78 13.31 86.01 1 2 3 Whitelist MALY-DE 0.54 0.75 0 0 0.48 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 4 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 10 63851366 102838404 2 10 1226 1 5 0 0 4 0.01 0.54 37 0 0 37 11 15 80 16 21 35.78 33.86 65.97 3 3 4 Whitelist MALY-DE 0.54 0.77 0 0 0.19 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 16 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 11 60485266 128776389 3 16 1226 1 7 0 1 7 0 1 56 0 0 56 23 37 81 23 37 35.78 54.73 41.67 0 3 2 Whitelist MALY-DE 6 0.62 1 0 0 0.11 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 25 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 12 25209883 25621843 4 4 1226 0 4 0 0 0 0.01 0 9 0 0 9 4 5 124 30 30 35.78 86.19 9.72 0 4 3 Whitelist MALY-DE 0.21 0 0 0 0.16 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 8 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 13 79515264 80225533 3 3 1226 0 3 0 0 0 0.03 0.16 5 0 0 5 3 4 48 17 17 35.78 4.99 95.01 0 4 2 Whitelist MALY-DE 0.41 0.36 0 0 0.33 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 6 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 14 49952540 50658959 6 6 1226 1 5 0 0 0 0.01 0 12 0 0 12 3 6 84 19 23 35.78 73.08 26.16 0 6 4 Whitelist MALY-DE 0.25 0.02 0 0 0.19 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 12 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 15 63129909 64356800 4 6 1226 0 2 1 1 2 0.57 0.16 5 0 0 5 0 3 59 6 10 35.78 99.74 0.16 0 5 6 Whitelist MALY-DE 4 0.68 0.37 0 0 0.64 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 10 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 16 56443375 57035973 2 2 1226 0 2 0 0 0 0.11 0.16 4 0 0 4 3 4 61 21 21 35.78 14.39 85.17 0 4 3 Whitelist MALY-DE 0.54 0.36 0 0 0.48 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 4 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 17 3664486 77914112 2 20 1226 1 7 2 0 10 0.01 0 83 0 0 83 14 17 89 14 14 35.78 19.53 75.38 2 3 2 Whitelist MALY-DE 3_5 0.47 0 0 0 0.19 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 30 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 18 44618661 46081260 9 9 1226 1 2 3 3 0 0.75 0.02 6 0 0 6 0 4 50 15 15 35.78 51.75 43.29 1 2 3 Whitelist MALY-DE 0.85 0.07 0 0 0.83 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 18 0.01 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 19 48236847 50544441 3 3 1226 0 1 1 1 0 0.8 0.54 5 0 0 5 3 4 33 10 11 35.78 14.05 77.18 0 3 2 Whitelist MALY-DE 0.87 0.77 0 0 0.84 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 6 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 20 21339597 23652599 3 3 1226 1 1 0 1 0 0.8 0.11 3 0 0 NA NA NA 22 5 8 35.78 34.13 58.67 0 3 2 Whitelist MALY-DE 0.87 0.29 0 0 0.84 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 6 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 21 18474607 19031664 2 2 1226 0 2 0 0 0 0.11 0.3 6 0 0 6 3 5 30 10 10 35.78 6.42 69.99 0 2 3 Whitelist MALY-DE 0.54 0.54 0 0 0.48 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 4 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 22 18414456 41180055 1 6 1226 0 4 0 0 2 0.01 0.43 12 0 0 12 7 12 15 8 9 35.78 11.66 88.34 0 2 3 Whitelist MALY-DE 0.54 0.68 0 0 0.16 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 10 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4145528 X 33015459 33594513 5 5 1226 1 4 0 0 0 0.04 0.21 8 0 0 8 4 7 70 15 15 35.78 27.63 72.37 4 3 4 Whitelist MALY-DE 0.45 0.44 0 0 0.36 0 No MALY-DE 4145528 MALY 0.49 2.4 Lymph-BNHL NA 10 0 NA 3 MALY-DE DO52686 4145528 male alive C83.3 other therapy partial response 62 2414 2414 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 79.41 MALY-DE::4146289 1 22542933 245483519 1 2 13 2 0 0 0 0 0.11 0 5 0 0 5 4 5 6 4 4 8.26 32.3 67.7 0 2 3 Whitelist MALY-DE 0.54 0.01 0 0 0.48 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 4 0.15 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 2 NA NA 0 0 13 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.25 0 NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 3 116348374 116844694 1 1 13 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 8.26 0.25 99.61 0 1 2 Whitelist MALY-DE 0.62 0.46 NA NA 0.59 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 4 171146825 172198209 1 1 13 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 8.26 0.55 99.44 0 1 2 Whitelist MALY-DE 0.62 0.04 0 NA 0.59 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 14 106329483 106757652 1 1 13 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 8.26 0.52 96.13 0 1 NA Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4146289 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4146289 MALY 0.37 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27793 4146289 male alive C83.7 other therapy complete response 14 456 456 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15 MALY-DE::4147081 1 77588781 145118488 13 25 107 2 4 5 2 12 0.56 0 12 0 0 12 12 12 15 13 13 13.49 2.79 97.21 0 1 2 Whitelist MALY-DE 5 0.92 0 0 0 0.64 1 High confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL Canonical without polyploidization 38 0.18 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 2 34509880 166819105 2 2 107 0 0 1 1 0 0.57 0.11 3 0 0 NA NA NA 5 3 3 13.49 0.23 99.67 0 2 1 Whitelist MALY-DE 0.68 0.29 0 0 0.64 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 3 112007049 169759318 3 8 107 0 0 1 2 5 0.3 0.02 8 0 0 8 8 8 16 14 14 13.49 26.4 73.46 0 1 2 Whitelist MALY-DE 0.62 0.08 0 0 0.59 1 High confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL Canonical without polyploidization 11 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 4 NA NA 0 0 107 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist MALY-DE NA 1 0 NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 5 149829718 164575331 2 13 107 0 0 2 0 11 0.11 0 9 0 0 9 9 9 15 15 15 13.49 7.87 91.99 0 1 2 Whitelist MALY-DE 1 0.8 0 0 0 0.48 1 Linked to high confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL Canonical without polyploidization 15 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 6 97247266 142316157 7 9 107 2 1 2 2 2 0.93 0.01 11 0 0 11 6 11 15 6 6 13.49 21.26 78.6 0 1 2 Whitelist MALY-DE 5 0.85 0.03 0 0 0.95 1 Low confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL With other complex events 16 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 7 78854657 90787874 2 4 107 1 1 0 0 2 0.57 0.19 7 0 0 7 0 3 13 3 4 13.49 54.02 45.76 0 1 3 Whitelist MALY-DE 0.68 0.41 0 0 0.64 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 8 28532675 54463876 3 12 107 0 1 2 0 9 0.3 0 14 0 0 14 14 14 23 21 21 13.49 17.04 79.53 0 1 2 Whitelist MALY-DE X 0.93 0 0 0 0.59 1 High confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL Canonical without polyploidization 15 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 9 36926600 36970583 1 1 107 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 13.49 0.04 99.83 0 1 2 Whitelist MALY-DE 0.62 1 0 NA 0.59 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 10 NA NA 0 0 107 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.49 NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 11 66164102 67102070 1 1 107 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 13.49 0.69 98.88 0 2 3 Whitelist MALY-DE 0.62 0.2 NA NA 0.59 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 12 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 13 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 14 106112699 106327166 1 2 107 1 0 0 0 1 0.39 0.58 2 NA NA NA NA NA NA NA NA 13.49 0.2 99.47 0 0 2 Whitelist MALY-DE 0.68 0.8 NA NA 0.59 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 3 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 15 40786051 65687740 1 2 107 1 1 0 0 0 0.57 0.77 4 NA 0 4 4 4 7 7 7 13.49 2.36 97.64 0 2 3 Whitelist MALY-DE 0.68 0.93 NA 0 0.64 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 16 10515997 12408641 1 2 107 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 7 7 7 13.49 2.35 97.56 0 2 3 Whitelist MALY-DE 0.54 1 NA 0 0.48 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 4 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 17 26640731 78911420 1 4 107 0 2 0 0 2 0.11 0.22 6 0.01 0 6 6 6 8 7 7 13.49 11.69 82.8 0 2 3 Whitelist MALY-DE 0.54 0.45 0.01 0 0.48 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 6 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 18 NA NA 0 0 107 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.77 NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 19 NA NA 0 0 107 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.37 NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 20 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 21 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 22 22385870 23247171 1 1 107 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 5 3 5 13.49 3.2 96.8 1 1 3 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 1 No MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL NA 2 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147081 X 10911003 81430405 1 12 107 1 1 1 0 9 0.8 0.01 13 0 0 13 13 13 15 15 15 13.49 13.53 86.24 0 2 3 Whitelist MALY-DE 8 0.93 0.05 0 0 0.84 1 Linked to high confidence MALY-DE 4147081 MALY 0.78 1.94 Lymph-BNHL Canonical without polyploidization 15 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 MALY-DE DO52677 4147081 female alive C82.0 other therapy complete response 42 1967 1967 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 64.7 MALY-DE::4147968 1 82059289 120354304 1 3 140 3 0 0 0 0 0.03 0.01 9 0 0 9 4 9 10 5 5 78.8 52.76 47.24 0 2 4 Whitelist MALY-DE 0.41 0.03 0 0 0.33 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 2 89161433 104997650 1 2 140 2 0 0 0 0 0.11 0.22 1 0 0 NA NA NA NA NA NA 78.8 99.36 0.54 2 3 NA Whitelist MALY-DE 0.54 0.45 0 0 0.48 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 3 6534290 46145442 8 17 140 3 2 3 0 9 0.39 0 5 0 0 5 0 4 18 7 7 78.8 66.16 33.81 0 2 3 Whitelist MALY-DE 0.68 0 0 0 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 25 0.09 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 4 30276216 125265483 1 5 140 5 0 0 0 0 0 0.74 7 0 0 7 7 7 10 7 10 78.8 99.33 0.48 0 3 2 Whitelist MALY-DE 0.1 0.91 0 0 0.07 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 10 0.04 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 5 41307865 130725868 1 5 140 4 0 0 0 1 0.01 0.22 4 0 0 4 3 4 5 3 3 78.8 99.88 0 0 4 1 Whitelist MALY-DE 0.45 0.46 0 0 0.16 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 9 0.03 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 6 497489 165945346 1 3 140 3 0 0 0 0 0.03 0.05 9 0.02 0 9 9 9 9 9 9 78.8 61.84 35.33 0 4 2 Whitelist MALY-DE 0.41 0.16 0.02 0 0.33 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 7 69154156 69198395 1 1 140 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 78.8 99.78 0 0 5 NA Whitelist MALY-DE 0.62 0.04 NA NA 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 8 18944997 118508299 1 4 140 4 0 0 0 0 0.01 0.33 6 0 0 6 6 6 7 7 7 78.8 99.99 0 0 3 4 Whitelist MALY-DE 0.21 0.58 0 0 0.16 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 9 36975207 37027450 1 1 140 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 78.8 99.82 0 0 4 6 Whitelist MALY-DE 0.62 0.16 NA NA 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 10 43547793 68937280 2 2 140 0 0 1 1 0 0.57 1 6 0 0 6 6 6 9 7 7 78.8 98.92 0.9 0 2 3 Whitelist MALY-DE 0.68 1 0 0 0.64 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 11 9506013 9700453 1 5 140 1 0 0 0 4 0.39 1 1 0 0 NA NA NA 6 6 6 78.8 96.17 0 0 3 NA Whitelist MALY-DE 12 0.62 1 0 0 0.59 1 Linked to high confidence MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL With other complex events 6 0.02 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 12 47913057 127394426 25 30 140 5 5 9 6 5 0.63 0 18 0 0 18 12 13 24 12 12 78.8 66.1 30.16 1 2 3 Whitelist MALY-DE 0.8 0 0 0 0.71 1 High confidence MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL Canonical without polyploidization 55 0.2 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 13 25367938 25498163 1 1 140 1 0 0 0 0 0.39 0.64 2 0 NA NA NA NA 5 5 5 78.8 99.88 0.12 0 2 3 Whitelist MALY-DE 0.62 0.85 0 NA 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 14 21079629 107113738 1 9 140 5 0 0 0 4 0 0.04 7 0 0 7 4 7 8 5 8 78.8 83.85 0.94 0 4 2 Whitelist MALY-DE 0.48 0.15 0 0 0.07 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 14 0.05 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 15 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 16 19725963 88749629 1 3 140 2 0 0 1 0 0.3 0.79 8 0 0 8 4 5 9 4 5 78.8 51.08 48.82 1 2 3 Whitelist MALY-DE 0.62 0.94 0 0 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 17 1693196 66339139 1 5 140 5 0 0 0 0 0 0.29 4 0.01 0 4 3 4 4 3 4 78.8 68.22 27.32 0 5 2 Whitelist MALY-DE 0.1 0.53 0.01 0 0.07 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 10 0.04 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 18 13870666 77356210 1 7 140 3 0 0 0 4 0.03 0.11 3 0 0 NA NA NA NA NA NA 78.8 99.04 0 0 1 4 Whitelist MALY-DE 0.62 0.28 0 0 0.33 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 10 0.04 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 19 1366371 12359066 2 2 140 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 6 6 6 78.8 99.83 0 0 3 NA Whitelist MALY-DE 0.68 0.03 0 0 0.64 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 20 41682819 41696312 1 1 140 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 78.8 99.01 0 0 3 4 Whitelist MALY-DE 0.62 1 0 NA 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 21 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 22 16855853 16869402 1 1 140 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 78.8 63.52 35.57 0 2 NA Whitelist MALY-DE 0.62 0.47 NA NA 0.59 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4147968 X 52861038 64828014 1 3 140 3 0 0 0 0 0.03 0.85 5 0 0 5 3 5 7 4 4 78.8 75.99 20.66 0 2 1 Whitelist MALY-DE 0.41 0.98 0 0 0.33 1 No MALY-DE 4147968 MALY 0.67 3.49 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52687 4147968 female alive C83.3 other therapy complete response 65 209 209 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.88 MALY-DE::4149246 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 2 89161432 89246819 1 1 8 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 17.12 99.86 0.04 0 2 3 Whitelist MALY-DE 0.62 0.75 NA NA 0.59 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 2 0.12 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 3 NA NA 0 0 8 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.69 NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 9 NA NA 0 0 8 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.52 NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 14 106112615 106325448 2 2 8 1 0 1 0 0 0.57 0 2 0 0 NA NA NA NA NA NA 17.12 0.82 98.94 0 1 2 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 4 0.25 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 18 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4149246 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4149246 MALY 0.67 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52656 4149246 male alive C82.1 other therapy complete response 41 2120 2120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 69.74 MALY-DE::4150895 1 220055067 232648767 2 2 39 0 0 1 1 0 0.57 0.03 4 0 0 4 4 4 19 7 9 91.19 93.1 3.88 0 4 6 Whitelist MALY-DE 0.68 0.11 0 0 0.64 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 4 0.05 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 2 NA NA 0 0 39 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 7 4 7 0 0 0 0 0 0 Whitelist MALY-DE NA 0.93 NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 3 NA NA 0 0 39 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 4 NA NA 0 0 39 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 5 12093586 46116557 1 2 39 1 1 0 0 0 0.57 0.73 4 0 0 4 3 4 5 3 3 91.19 99.86 0 0 5 6 Whitelist MALY-DE 0.68 0.91 0 0 0.64 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 4 0.05 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 6 23058440 94967790 1 3 39 1 1 1 0 0 0.8 0.08 6 0 0 6 3 6 7 3 3 91.19 52.63 47.22 1 3 2 Whitelist MALY-DE 0.87 0.23 0 0 0.84 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 6 0.08 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 8 15151550 15263371 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 91.19 99.81 0.08 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 2 0.03 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 9 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 10 NA NA 0 0 39 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 11 3231504 3792694 1 1 39 0 1 0 0 0 0.39 0.43 2 0 0 NA NA NA 4 4 4 91.19 99.57 0 0 4 5 Whitelist MALY-DE 0.62 0.68 0 0 0.59 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 2 0.03 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 12 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 13 65028177 92113013 1 2 39 0 2 0 0 0 0.11 0.39 3 NA 0 NA NA NA NA NA NA 91.19 100 0 0 3 5 Whitelist MALY-DE 0.54 0.64 NA 0 0.48 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 4 0.05 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 14 106176987 106329923 1 1 39 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 91.19 99.09 0 0 4 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 2 0.03 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 15 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 16 27466843 27482524 1 1 39 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 5 0 3 91.19 99.76 0.15 0 4 6 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 2 0.03 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 17 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 22 27590600 46631056 1 1 39 0 0 0 1 0 0.39 0.37 3 NA NA NA NA NA NA NA NA 91.19 100 0 0 4 3 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 2 0.03 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4150895 X 63893 63417998 5 5 39 1 1 1 2 0 0.9 0 14 0 0 14 4 5 17 4 4 91.19 99.7 0.03 0 2 8 Whitelist MALY-DE 0.93 0 0 0 0.92 0 No MALY-DE 4150895 MALY 0.69 4.13 Lymph-BNHL NA 10 0.13 NA 4 MALY-DE DO52666 4150895 female alive C83.3 other therapy complete response 57 996 996 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 32.76 MALY-DE::4157186 1 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 2 36073033 243043088 15 28 46 0 3 6 6 13 0.09 0 10 0 0 10 5 10 10 5 5 14.96 2.38 97.53 1 1 2 Whitelist MALY-DE 0.62 0 0 0 0.48 0 Low confidence MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL With other complex events 43 0.47 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 3 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 4 69602537 108006799 8 8 46 2 2 2 2 0 1 0 4 0 0 4 4 4 5 5 5 14.96 19.98 80 0 1 2 Whitelist MALY-DE 1 0.01 0 0 1 0 Low confidence MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL Canonical without polyploidization 16 0.17 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 5 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 6 120910555 120931196 1 2 46 1 0 0 0 1 0.39 0.36 1 NA NA NA NA NA 5 3 3 14.96 21.57 78.29 0 2 NA Whitelist MALY-DE 0.54 0.61 NA NA 0.59 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 3 0.03 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 7 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 8 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 9 21838678 22063510 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.96 0.16 99.17 0 0 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 12 49275441 50553746 1 1 46 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 14.96 0.96 98.96 0 1 2 Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 14 106330466 106349763 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.96 0.56 98.94 0 1 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 18 NA NA 0 0 46 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 22 22749829 23247169 1 1 46 1 0 0 0 0 0.39 0.42 3 NA NA NA NA NA 4 0 3 14.96 0.97 99.03 0 0 1 Whitelist MALY-DE 0.62 0.67 NA NA 0.59 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4157186 X NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4157186 MALY 0.75 2.04 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52657 4157186 male alive C83.3 other therapy complete response 74 464 464 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.26 MALY-DE::4158726 1 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 2 89132276 89291927 2 2 47 2 0 0 0 0 0.11 0.8 2 0 0 NA NA NA 6 4 4 7.2 1.51 95.41 0 0 1 Whitelist MALY-DE 0.54 0.95 0 0 0.48 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 3 46273960 78868248 1 1 47 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 7.2 16.46 83.49 0 1 2 Whitelist MALY-DE 0.62 0.5 NA NA 0.59 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 4 7314819 7342116 1 1 47 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 7.2 0.01 99.97 0 1 2 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 5 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 6 72821812 86825939 1 1 47 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 5 5 5 7.2 8.22 91.63 0 1 2 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 7 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 8 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 9 20938863 81861602 6 11 47 3 0 1 2 5 0.34 0 11 0 0 11 6 11 13 6 6 7.2 1.07 98.23 0 1 2 Whitelist MALY-DE 18 0.74 0 0 0 0.59 1 Low confidence MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL With other complex events 17 0.18 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 10 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 11 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 12 NA NA 0 0 47 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 13 29727063 43934817 1 15 47 1 0 1 1 12 0.8 0 8 0 0 8 8 8 11 11 11 7.2 4.83 95.17 0 1 2 Whitelist MALY-DE 18 0.62 0 0 0 0.84 1 Linked to high confidence MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL Canonical without polyploidization 18 0.19 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 14 NA NA 0 0 47 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.87 NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 15 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 17 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 18 49801362 72732256 5 26 47 0 1 3 1 21 0.28 0 16 0 0 16 16 16 17 17 17 7.2 7.78 92.19 0 1 2 Whitelist MALY-DE 9_13 0.82 0 0 0 0.59 1 High confidence MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL Canonical without polyploidization 31 0.33 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 19 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 20 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4158726 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4158726 MALY 0.45 1.93 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27797 4158726 male alive C82.0 other therapy complete response 48 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4159170 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 11 116742244 130994166 4 4 8 1 1 1 1 0 1 0 8 0 0 8 8 8 9 9 9 14.37 1.71 97.85 0 1 2 Whitelist MALY-DE 1 0 0 0 1 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 8 0.5 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 14 106212550 106326105 1 1 8 1 0 0 0 0 0.39 0 2 0.01 NA NA NA NA 4 3 3 14.37 0.72 99.05 0 1 2 Whitelist MALY-DE 0.62 0 0.01 NA 0.59 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 2 0.12 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 18 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159170 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159170 MALY 0.57 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27773 4159170 male alive C82.0 other therapy complete response 43 1615 1615 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 53.12 MALY-DE::4159421 1 189192920 189211210 1 1 125 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 33.79 57.47 42.53 0 2 NA Whitelist MALY-DE 0.62 0.08 0 NA 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 2 10964472 189564537 1 8 125 7 1 0 0 0 0 0.42 8 0 0 8 4 8 9 5 5 33.79 0.16 99.74 3 2 1 Whitelist MALY-DE 0.06 0.67 0 0 0.04 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 16 0.06 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 3 144600550 144625758 2 2 125 1 0 1 0 0 0.57 0.16 2 0 0 NA NA NA 10 4 5 33.79 17.05 82.8 0 2 3 Whitelist MALY-DE 0.68 0.36 0 0 0.64 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 4 46285595 119153734 2 4 125 0 0 2 2 0 0.26 0 3 0 0 NA NA NA 11 7 7 33.79 0.88 98.88 0 2 1 Whitelist MALY-DE 0.62 0.01 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 5 30349700 179673652 1 7 125 2 3 0 0 2 0.14 0.58 3 0 0 NA NA NA NA NA NA 33.79 21.15 78.73 0 2 1 Whitelist MALY-DE 0.54 0.8 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 12 0.05 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 6 8252616 8271445 1 1 125 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 33.79 61.27 38.49 0 2 NA Whitelist MALY-DE 0.62 0.32 NA NA 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 7 69194562 110850457 1 4 125 2 2 0 0 0 0.26 0.69 6 0 0 6 0 4 11 3 7 33.79 85.46 11.98 1 2 3 Whitelist MALY-DE 0.62 0.89 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 8 83643802 111216616 1 4 125 2 2 0 0 0 0.26 0.54 4 0 0 4 4 4 5 5 5 33.79 15.65 84.34 0 1 2 Whitelist MALY-DE 0.62 0.77 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 9 6014400 94112690 4 4 125 0 1 1 2 0 0.57 0.03 5 0 0 5 3 4 9 4 4 33.79 21.43 75.46 1 2 1 Whitelist MALY-DE 0.68 0.12 0 0 0.64 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 10 5628631 33891062 3 3 125 2 1 0 0 0 0.3 0.29 3 0 0 NA NA NA 4 4 4 33.79 89.53 7.12 0 2 1 Whitelist MALY-DE 0.62 0.53 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 11 80243283 88539602 1 2 125 2 0 0 0 0 0.11 0.67 2 0 0 NA NA NA NA NA NA 33.79 37.1 62.47 0 1 2 Whitelist MALY-DE 0.54 0.87 0 0 0.48 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 12 16980184 60117182 1 3 125 2 1 0 0 0 0.3 0.29 1 0 0 NA NA NA NA NA NA 33.79 99.98 0 0 3 NA Whitelist MALY-DE 0.62 0.54 0 0 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 13 57016265 68412141 1 2 125 1 1 0 0 0 0.57 0.62 1 0 0 NA NA NA 4 4 4 33.79 48.52 37.32 0 1 NA Whitelist MALY-DE 0.68 0.84 0 0 0.64 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 14 44441145 106067968 1 3 125 1 1 1 0 0 0.8 0.6 3 0 0 NA NA NA NA NA NA 33.79 21.18 62.92 0 2 1 Whitelist MALY-DE 0.87 0.82 0 0 0.84 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 15 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 16 23524972 23588727 2 2 125 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 6 0 4 33.79 26.74 72.38 0 1 2 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 4 0.02 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 17 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 18 64421281 64465448 1 1 125 1 0 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 33.79 0 99.96 0 2 NA Whitelist MALY-DE 0.62 0.93 NA NA 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 19 6528854 6664837 1 1 125 1 0 0 0 0 0.39 0.74 2 0 NA NA NA NA NA NA NA 33.79 11.1 88.73 0 0 2 Whitelist MALY-DE 0.62 0.91 0 NA 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 20 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 21 22353427 22364682 1 1 125 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 33.79 74.88 2.48 0 1 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 22 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4159421 X 29020291 147157884 1 9 125 7 2 0 0 0 0 0.01 1 0 0 NA NA NA NA NA NA 33.79 18.69 81.09 0 2 NA Whitelist MALY-DE 0.12 0.05 0 0 0.08 0 No MALY-DE 4159421 MALY 0.26 1.85 Lymph-BNHL NA 18 0.07 NA 3 MALY-DE DO52648 4159421 female deceased C82.3 other therapy disease progression 78 153 153 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.03 MALY-DE::4160100 1 229718263 237437404 3 5 60 1 1 0 1 2 0.8 0 1 0 0 NA NA NA 5 5 5 11.71 16.1 83.9 0 2 NA Whitelist MALY-DE 2 0.93 0.01 0 0 0.84 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 8 0.07 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 2 89132284 114714090 1 2 60 2 0 0 0 0 0.11 0 5 0 0 5 5 5 5 5 5 11.71 0.1 99.81 2 2 1 Whitelist MALY-DE 0.54 0.02 0 0 0.48 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 3 81747096 81759309 1 1 60 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 11.71 0 99.95 0 2 NA Whitelist MALY-DE 0.62 0.32 NA NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 4 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 5 NA NA 0 0 60 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.4 NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 6 121377536 147711336 4 4 60 1 0 1 2 0 0.57 0.41 3 0 0 NA NA NA NA NA NA 11.71 15.39 84.46 0 2 1 Whitelist MALY-DE 0.68 0.66 0 0 0.64 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 8 0.07 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 7 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 8 134031019 134079410 1 1 60 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 11.71 0.03 99.96 0 1 2 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 9 21833962 21985199 1 2 60 1 0 0 0 1 0.39 0.51 3 NA NA NA NA NA 5 3 3 11.71 0.16 99.7 0 1 0 Whitelist MALY-DE 0.68 0.75 NA NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 3 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 10 NA NA 0 0 60 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.76 NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 11 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 12 49403400 49441160 1 1 60 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 11.71 0.03 99.89 0 1 2 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 13 25850246 33554966 2 4 60 0 0 1 1 2 0.57 0.06 7 0 0 7 7 7 7 7 7 11.71 0.61 99.39 0 2 1 Whitelist MALY-DE 0.68 0.18 0 0 0.64 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 6 0.05 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 14 106330466 106346893 1 1 60 1 0 0 0 0 0.39 0.04 1 0 NA NA NA NA NA NA NA 11.71 0.04 99.05 0 1 NA Whitelist MALY-DE 0.62 0.14 0 NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 15 56397413 56657809 1 1 60 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 11.71 0.25 99.75 0 1 2 Whitelist MALY-DE 0.62 0.03 0 NA 0.59 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 16 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 17 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 19 945638 56277099 9 9 60 1 5 1 2 0 0.19 0 24 0 0 24 4 5 25 4 6 11.71 55.51 44.05 0 1 3 Whitelist MALY-DE 0.62 0 0 0 0.59 0 Low confidence MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL With other complex events 18 0.15 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 20 NA NA 0 0 60 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160100 X 113664049 148318224 1 2 60 2 0 0 0 0 0.11 1 4 0 0 4 4 4 5 5 5 11.71 99.78 0 0 1 3 Whitelist MALY-DE 0.54 1 0 0 0.48 0 No MALY-DE 4160100 MALY 0.76 2.08 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO52651 4160100 female alive C83.0 other therapy stable disease 72 741 741 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 24.38 MALY-DE::4160468 1 NA NA 0 0 14 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.55 NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 2 53436918 202027644 1 3 14 2 0 1 0 0 0.3 0.11 5 0.01 0 5 3 3 6 3 3 6.16 14.84 82.06 0 3 0 Whitelist MALY-DE 0.62 0.28 0.01 0 0.59 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 6 0.21 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 3 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 9 NA NA 0 0 14 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.27 NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 14 91977897 106327576 1 5 14 2 1 0 0 2 0.3 0 3 0 0 NA NA NA 6 5 6 6.16 0.86 83.89 0 2 1 Whitelist MALY-DE 0.68 0 0 0 0.59 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 8 0.29 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 16 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 18 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4160468 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4160468 MALY 0.59 1.96 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27835 4160468 male deceased C82.1 other therapy complete response 62 2645 2645 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 87.01 MALY-DE::4161781 1 195477123 195490323 1 1 49 0 1 0 0 0 0.39 0.79 1 0 NA NA NA NA NA NA NA 3.86 29.28 70.71 0 3 NA Whitelist MALY-DE 0.62 0.94 0 NA 0.59 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 2 NA NA 0 0 49 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.68 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 3 36036792 165865377 1 6 49 2 4 0 0 0 0.06 0.02 6 0 0 6 4 6 7 5 7 3.86 0.02 99.68 1 2 3 Whitelist MALY-DE 0.54 0.08 0 0 0.48 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 12 0.12 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 4 NA NA 0 0 49 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.93 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 5 85205369 162370186 1 2 49 0 2 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 3.86 0.02 99.84 1 2 3 Whitelist MALY-DE 0.54 1 0 0 0.48 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 6 137405145 140519331 1 1 49 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 3.86 1.82 98.03 0 1 2 Whitelist MALY-DE 0.62 1 0 NA 0.59 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 7 145702620 145731483 2 2 49 0 1 1 0 0 0.57 0.19 1 0 0 NA NA NA NA NA NA 3.86 0 99.77 1 2 NA Whitelist MALY-DE 0.68 0.41 0 0 0.64 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 8 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 9 5509247 10327818 1 2 49 0 2 0 0 0 0.11 0.12 2 0 0 NA NA NA 4 3 3 3.86 31.41 67.89 0 4 18 Whitelist MALY-DE 0.54 0.31 0 0 0.48 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 10 NA NA 0 0 49 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 11 NA NA 0 0 49 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 12 NA NA 0 0 49 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.74 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 13 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 14 103173751 106331772 1 5 49 3 1 1 0 0 0.28 0 5 0 0 5 3 3 6 4 4 3.86 0.53 99.47 0 1 2 Whitelist MALY-DE 0.62 0.02 0 0 0.59 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 10 0.1 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 15 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 16 NA NA 0 0 49 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.05 0 NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 17 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 18 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 19 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 20 NA NA 0 0 49 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.53 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 21 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 22 NA NA 0 0 49 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.08 NA NA NA 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4161781 X 34910998 34923822 2 2 49 0 0 1 1 0 0.57 0.74 1 0 0 NA NA NA NA NA NA 3.86 0 99.78 0 2 NA Whitelist MALY-DE 0.68 0.91 0 0 0.64 0 No MALY-DE 4161781 MALY 0.42 2.05 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52679 4161781 female alive C83.3 other therapy complete response 36 274 274 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 9.01 MALY-DE::4163639 1 37916039 241943676 1 13 146 3 4 2 1 3 0.57 0.16 14 0 0 14 5 9 17 7 9 15.89 49.73 46.94 1 1 2 Whitelist MALY-DE 2 0.9 0.37 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 23 0.08 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 2 74996321 185570280 1 3 146 2 0 1 0 0 0.3 1 6 0 0 6 5 6 10 5 5 15.89 16.07 83.82 7 2 1 Whitelist MALY-DE 0.62 1 0 0 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 3 6372772 163687650 1 11 146 1 4 1 2 3 0.39 0.25 8 0 0 8 8 8 10 9 9 15.89 11.8 88.08 2 2 3 Whitelist MALY-DE 4 0.87 0.49 0 0 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 19 0.07 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 4 163994720 181841168 2 6 146 2 0 1 1 2 0.57 0.1 9 0 0 9 7 9 15 9 9 15.89 0.96 99.03 2 2 1 Whitelist MALY-DE 3 0.68 0.26 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 10 0.03 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 5 24272391 158501978 1 3 146 2 1 0 0 0 0.3 0.39 4 0 0 4 3 4 5 3 3 15.89 0.26 99.6 2 2 1 Whitelist MALY-DE 0.62 0.64 0 0 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 6 31680402 34230592 3 5 146 0 2 0 1 2 0.3 0.16 6 0 0 6 3 6 12 6 6 15.89 11.42 88.44 3 3 4 Whitelist MALY-DE 0.68 0.37 0 0 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 8 0.03 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 7 126144700 129451971 2 2 146 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA 16 9 9 15.89 5.55 94.22 0 2 NA Whitelist MALY-DE 0.68 0.14 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 8 59807680 141384461 1 8 146 3 3 0 0 2 0.11 0.06 10 0 0 10 4 5 11 4 4 15.89 0.56 99.43 2 2 3 Whitelist MALY-DE 0.68 0.18 0 0 0.48 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 14 0.05 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 9 80964787 80985984 2 2 146 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 4 4 4 15.89 12.52 86.78 0 2 NA Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 10 93754399 93833941 1 1 146 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 5 3 3 15.89 26.12 73.7 1 1 2 Whitelist MALY-DE 0.62 0.98 0 NA 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 11 35300267 40372471 1 2 146 1 1 0 0 0 0.57 0.69 2 0 0 NA NA NA 4 3 3 15.89 35.85 63.72 0 3 4 Whitelist MALY-DE 0.68 0.89 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 12 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 13 79822841 99056786 1 2 146 0 2 0 0 0 0.11 0.65 4 0 0 4 3 4 6 3 3 15.89 46.31 53.69 0 4 3 Whitelist MALY-DE 0.54 0.86 0 0 0.48 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 14 78798504 106210098 1 3 146 1 2 0 0 0 0.3 1 3 0 0 NA NA NA 5 4 4 15.89 0.99 98.81 1 3 2 Whitelist MALY-DE 0.62 1 0 0 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 15 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 16 731806 63927729 1 4 146 0 2 0 0 2 0.11 0.12 1 0 0 NA NA NA NA NA NA 15.89 0 99.91 0 2 NA Whitelist MALY-DE 0.68 0.3 0 0 0.48 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 6 0.02 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 17 30539824 68571308 1 2 146 1 1 0 0 0 0.57 0.45 3 NA 0 NA NA NA NA NA NA 15.89 0.07 99.93 0 2 3 Whitelist MALY-DE 0.68 0.69 NA 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 18 51096087 77551722 2 2 146 2 0 0 0 0 0.11 0.29 4 0 0 4 0 4 6 3 4 15.89 34.14 65.37 2 2 1 Whitelist MALY-DE 0.54 0.54 0 0 0.48 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 19 1265879 1595051 1 1 146 0 0 1 0 0 0.39 0.54 2 0 NA NA NA NA NA NA NA 15.89 2.52 97.3 0 2 3 Whitelist MALY-DE 0.62 0.77 0 NA 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 20 34265770 34700410 2 2 146 1 0 1 0 0 0.57 1 3 0 0 NA NA NA NA NA NA 15.89 0.26 98.76 0 2 3 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 21 19883963 27338711 1 2 146 1 1 0 0 0 0.57 0.7 4 NA 0 4 3 4 4 3 3 15.89 56.78 20.58 0 3 2 Whitelist MALY-DE 0.68 0.9 NA 0 0.64 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 4 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 22 NA NA 0 0 146 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.49 NA NA NA 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4163639 X 118874292 118985882 1 1 146 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 15.89 25.13 74.64 0 1 2 Whitelist MALY-DE 0.62 0.32 NA NA 0.59 0 No MALY-DE 4163639 MALY 0.6 2.08 Lymph-BNHL NA 2 0.01 NA 3 MALY-DE DO27779 4163639 female alive C83.3 other therapy partial response 75 828 828 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.24 MALY-DE::4165379 1 157348353 157458075 1 1 5 0 0 0 1 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 4.84 0 100 0 2 NA Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 2 0.2 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 7 100940574 115482547 1 1 5 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 4.84 9.24 90.52 0 1 2 Whitelist MALY-DE 0.62 0.1 NA NA 0.59 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 2 0.2 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 8 128498760 129410507 1 1 5 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 4.84 0.62 99.37 0 2 3 Whitelist MALY-DE 0.62 0.46 NA NA 0.59 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 2 0.2 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 14 106240353 106327082 1 1 5 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 4.84 0.96 83.8 0 0 NA Whitelist MALY-DE 0.62 0.35 NA NA 0.59 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 2 0.2 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4165379 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4165379 MALY 0.27 2.04 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52680 4165379 female alive C82.0 other therapy complete response 64 1450 1450 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 47.7 MALY-DE::4166151 1 2499170 118929960 1 2 31 1 0 0 1 0 0.57 1 4 NA 0.04 4 4 4 5 5 5 11.37 0.04 99.96 0 1 2 Whitelist MALY-DE 0.68 1 NA 0.04 0.64 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 4 0.06 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 2 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 3 60417662 142442106 1 3 31 1 2 0 0 0 0.3 0.48 4 0 0 4 4 4 5 5 5 11.37 1.44 98.39 0 2 3 Whitelist MALY-DE 0.62 0.72 0 0 0.59 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 6 0.1 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 4 179509319 179898033 1 1 31 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 11.37 0.2 99.78 0 1 2 Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 5 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 6 67245955 68378004 3 3 31 1 0 1 1 0 0.8 0.04 2 0 0 NA NA NA NA NA NA 11.37 0.31 99.52 0 2 3 Whitelist MALY-DE 0.87 0.13 0 0 0.84 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 6 0.1 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 7 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 8 4729637 4801564 1 1 31 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 11.37 99.94 0.05 0 2 3 Whitelist MALY-DE 0.62 0.87 NA NA 0.59 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 9 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 10 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 11 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 13 29329242 93235286 1 3 31 0 3 0 0 0 0.03 0.09 6 0 0 6 6 6 7 7 7 11.37 7.14 92.86 0 2 3 Whitelist MALY-DE 0.41 0.25 0 0 0.33 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 6 0.1 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 14 106095460 106326698 3 3 31 2 1 0 0 0 0.3 0 2 0 0 NA NA NA NA NA NA 11.37 0.55 98.94 0 1 2 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 6 0.1 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 15 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 17 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 18 NA NA 0 0 31 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.16 NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 20 46233256 46266940 1 1 31 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 11.37 0 99.03 0 2 NA Whitelist MALY-DE 0.62 0.74 NA NA 0.59 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 21 NA NA 0 0 31 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166151 X NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4166151 MALY 0.86 2.12 Lymph-BNHL NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;nonsynonymous_SNV,17_7576541_A_G;17_7576650_C_G;17_7577594_C_A,CN:2 2 MALY-DE DO52671 4166151 female deceased C83.3 other therapy disease progression 74 194 194 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.38 MALY-DE::4166503 1 1436091 9746835 1 1 9 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 8.07 3.33 96.66 0 1 2 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 2 89132284 89399354 1 1 9 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 8.07 0.11 99.79 0 0 2 Whitelist MALY-DE 0.62 0.77 NA NA 0.59 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 6 77662997 165400116 1 1 9 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 8.07 51.27 48.58 0 1 2 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 14 NA NA 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 18 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.09 NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 19 37093402 37181019 1 1 9 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 8.07 0.15 99.68 0 1 2 Whitelist MALY-DE 0.62 0.37 NA NA 0.59 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 22 22677321 23263575 1 2 9 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA 4 0 3 8.07 1.14 98.86 0 0 1 Whitelist MALY-DE 0.54 0.03 NA 0 0.48 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 4 0.22 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166503 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166503 MALY 0.8 1.9 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52662 4166503 male alive C82.0 other therapy partial response 43 859 859 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.26 MALY-DE::4166706 1 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 2 48119635 100345311 1 1 25 0 1 0 0 0 0.39 1 3 NA NA NA NA NA 5 3 3 86.74 96.74 0.18 0 4 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 2 0.04 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 3 60376604 60673852 2 2 25 2 0 0 0 0 0.11 0.01 5 0 0 5 4 5 8 4 4 86.74 99.95 0 0 0 1 Whitelist MALY-DE 0.54 0.03 0 0 0.48 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 4 0.08 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 4 NA NA 0 0 25 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.88 NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 7 110484395 110572258 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.74 99.77 0 1 4 5 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 2 0.04 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 8 36711589 52516009 1 2 25 0 0 1 1 0 0.57 0.37 5 NA 0 5 0 3 7 3 4 86.74 96.58 0 1 4 6 Whitelist MALY-DE 0.68 0.62 NA 0 0.64 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 4 0.08 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 9 21952349 33311874 1 3 25 3 0 0 0 0 0.03 0.02 4 0 0 4 4 4 6 5 5 86.74 98.9 0.4 0 2 4 Whitelist MALY-DE 0.41 0.07 0 0 0.33 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 6 0.12 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 12 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 14 106110145 106370547 1 4 25 2 0 1 0 1 0.3 0 4 0 0 4 0 4 6 0 3 86.74 96.21 0.09 2 1 2 Whitelist MALY-DE 0.68 0.01 0 0 0.59 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 7 0.14 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 17 NA NA 0 0 25 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.11 NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 22 NA NA 0 0 25 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.5 NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4166706 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4166706 MALY 0.35 3.78 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO27853 4166706 male alive C83.3 other therapy partial response 62 474 474 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 15.59 MALY-DE::4170686 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 2 89161075 89987082 1 2 6 1 0 0 1 0 0.57 0.01 2 0 0 NA NA NA NA NA NA 12.11 0.05 99.85 0 1 2 Whitelist MALY-DE 0.68 0.05 0 0 0.64 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 4 0.33 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 14 106240293 106326488 1 1 6 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 4 12.11 0.1 96.17 0 0 3 Whitelist MALY-DE 0.62 0 NA NA 0.59 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 2 0.17 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 18 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.05 NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4170686 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4170686 MALY 0.54 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27837 4170686 male alive C82.0 other therapy disease progression 56 917 917 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 30.16 MALY-DE::4174905 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 14 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.03 NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 16 3727708 3908018 1 1 4 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 7.57 0 99.91 0 2 NA Whitelist MALY-DE 0.62 0.27 NA NA 0.59 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 2 0.25 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 18 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.02 NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 20 41821393 59822003 1 1 4 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 7.57 28.56 70.45 0 1 2 Whitelist MALY-DE 0.62 0.24 NA NA 0.59 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 2 0.25 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4174905 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4174905 MALY 0.66 1.94 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27843 4174905 male alive C82.0 other therapy complete response 72 1525 1525 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 50.16 MALY-DE::4175837 1 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 2 58088119 174844565 1 4 35 2 2 0 0 0 0.26 0.02 9 0 0 9 3 5 14 7 7 24.05 1.87 95.45 0 2 3 Whitelist MALY-DE 0.62 0.09 0 0 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 8 0.11 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 3 49998006 188729907 2 2 35 0 0 1 1 0 0.57 0.73 3 0.07 0 NA NA NA NA NA NA 24.05 99.95 0 0 3 1 Whitelist MALY-DE 0.68 0.91 0.08 0 0.64 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 4 125021 138065930 1 3 35 3 0 0 0 0 0.03 0.03 4 0 0 4 4 4 5 5 5 24.05 0.15 99.84 0 1 2 Whitelist MALY-DE 0.41 0.1 0 0 0.33 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 6 0.09 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 5 NA NA 0 0 35 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 6 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 8 15814315 145990607 1 2 35 2 0 0 0 0 0.11 0.7 2 NA 0.04 NA NA NA NA NA NA 24.05 99.4 0.33 0 2 3 Whitelist MALY-DE 0.54 0.89 NA 0.04 0.48 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 9 21711998 22137525 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.05 0.3 99.55 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 11 27146184 27345112 1 1 35 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA 4 3 3 24.05 37.11 62.47 0 4 5 Whitelist MALY-DE 0.62 0.88 NA NA 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 12 40398846 60000568 2 2 35 1 1 0 0 0 0.57 0.22 4 0 0 4 3 4 7 3 3 24.05 14.61 85.31 0 2 1 Whitelist MALY-DE 0.68 0.46 0 0 0.64 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 4 0.06 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 13 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 14 67628073 67826580 1 1 35 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA 7 0 3 24.05 1.23 95.39 0 2 NA Whitelist MALY-DE 0.62 0.26 NA NA 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 15 35212812 35273484 1 1 35 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA NA NA NA 24.05 0.06 99.81 0 2 3 Whitelist MALY-DE 0.62 0.84 NA NA 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 18 NA NA 0 0 35 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.48 NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 19 7541332 37208092 1 3 35 2 0 1 0 0 0.3 0.03 3 0 0 NA NA NA NA NA NA 24.05 0.2 99.63 0 2 1 Whitelist MALY-DE 0.62 0.11 0 0 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 6 0.09 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4175837 X 75600061 139676449 1 3 35 2 1 0 0 0 0.3 0.03 4 0 0 4 3 4 5 3 3 24.05 99.51 0.27 0 3 2 Whitelist MALY-DE 0.62 0.11 0 0 0.59 0 No MALY-DE 4175837 MALY 0.34 2.26 Lymph-BNHL NA 6 0.09 NA 2 MALY-DE DO27787 4175837 female alive C82.3 other therapy partial response 74 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4176133 1 115799141 120282611 1 1 59 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 4 5 14.43 30.39 69.61 0 1 2 Whitelist MALY-DE 0.62 0.58 NA NA 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 2 89132286 89533668 1 1 59 1 0 0 0 0 0.39 0.34 2 0 NA NA NA NA 7 7 7 14.43 2.34 97.54 0 1 2 Whitelist MALY-DE 0.62 0.59 0 NA 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 3 60353675 60374157 1 1 59 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 14.43 0 99.95 0 2 NA Whitelist MALY-DE 0.62 1 0 NA 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 4 13451852 47025457 1 3 59 3 0 0 0 0 0.03 1 2 0 0 NA NA NA NA NA NA 14.43 0.02 99.96 0 1 2 Whitelist MALY-DE 0.41 1 0 0 0.33 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 6 0.05 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 5 106538654 165846791 1 5 59 2 1 0 0 2 0.3 0.03 6 0 0 6 4 6 8 6 8 14.43 37.01 62.85 0 3 2 Whitelist MALY-DE 0.62 0.11 0 0 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 8 0.07 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 6 32211716 44302988 1 6 59 3 0 0 0 3 0.03 0.09 8 0 0 8 3 8 9 3 3 14.43 20.53 79.34 0 2 1 Whitelist MALY-DE 0.68 0.25 0 0 0.33 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 9 0.08 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 7 3937317 111179252 1 3 59 2 1 0 0 0 0.3 1 5 0.01 0 5 5 5 5 5 5 14.43 0.14 97.13 0 2 1 Whitelist MALY-DE 0.62 1 0.01 0 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 6 0.05 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 8 129178866 129190947 1 1 59 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 14.43 0.01 99.98 0 2 4 Whitelist MALY-DE 0.62 0.93 NA NA 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 9 337031 134344641 1 4 59 4 0 0 0 0 0.01 0.29 4 0.06 0 4 4 4 5 5 5 14.43 0.26 99.04 0 1 2 Whitelist MALY-DE 0.21 0.54 0.06 0 0.16 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 8 0.07 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 11 23360704 121376895 1 2 59 2 0 0 0 0 0.11 0.75 4 NA 0 4 4 4 5 5 5 14.43 0.07 99.37 0 1 2 Whitelist MALY-DE 0.54 0.92 NA 0 0.48 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 12 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 14 106054879 106385875 1 3 59 1 0 0 0 2 0.39 0.11 2 0 0 NA NA NA NA NA NA 14.43 0.82 98.94 0 1 2 Whitelist MALY-DE 0.62 0.29 0 0 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 16 77424240 77488721 1 1 59 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 6 5 5 14.43 34.72 64.19 0 1 2 Whitelist MALY-DE 0.62 0.87 NA NA 0.59 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 17 73237624 74789582 1 2 59 2 0 0 0 0 0.11 0.02 1 0 0 NA NA NA NA NA NA 14.43 0 100 0 2 NA Whitelist MALY-DE 0.54 0.09 0 0 0.48 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 19 2022616 43007888 1 11 59 9 0 1 0 1 0 0 10 0 0 10 9 10 10 9 9 14.43 3.88 95.95 0 2 1 Whitelist MALY-DE 0.03 0 0 0 0.01 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 21 0.18 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 22 22712609 41646446 1 3 59 3 0 0 0 0 0.03 0.03 4 0 0 4 4 4 5 5 5 14.43 1.78 98.22 0 1 2 Whitelist MALY-DE 0.41 0.12 0 0 0.33 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 6 0.05 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4176133 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4176133 MALY 0.76 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27855 4176133 female alive C83.3 other therapy complete response 61 326 326 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 10.72 MALY-DE::4177376 1 57333582 86713544 1 1 24 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA 5 4 4 14.95 67.27 32.72 0 1 2 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 2 57927350 167349037 1 2 24 1 1 0 0 0 0.57 1 6 NA 0 6 3 5 7 3 5 14.95 18.92 80.98 0 2 0 Whitelist MALY-DE 0.68 1 NA 0 0.64 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 4 0.08 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 3 78208470 78220495 1 1 24 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.95 0 99.95 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 5 158315884 158508506 1 1 24 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.95 0.11 99.76 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 6 93972027 94300685 1 1 24 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 14.95 66.37 33.47 0 0 1 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 10 86832741 110063842 1 1 24 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 14.95 17.14 82.68 0 1 2 Whitelist MALY-DE 0.62 0.26 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 11 NA NA 0 0 24 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.56 NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 12 82133214 82257424 1 1 24 1 0 0 0 0 0.39 0 2 0.01 NA NA NA NA 4 4 4 14.95 10.79 89.13 0 1 2 Whitelist MALY-DE 0.62 0.02 0.01 NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 13 69277905 69472553 1 1 24 0 0 0 1 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 14.95 0 100 0 2 NA Whitelist MALY-DE 0.62 0.79 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 14 106380223 107218664 1 1 24 0 0 0 1 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 14.95 0.24 99.64 0 1 2 Whitelist MALY-DE 0.62 0.13 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 15 44993594 45031340 1 1 24 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 14.95 59.41 40.46 0 0 1 Whitelist MALY-DE 0.62 0.34 NA NA 0.59 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 17 15313918 20289547 1 2 24 2 0 0 0 0 0.11 0.03 4 NA 0 4 4 4 6 6 6 14.95 18.93 81.02 0 1 2 Whitelist MALY-DE 0.54 0.1 NA 0 0.48 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 4 0.08 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 18 NA NA 0 0 24 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.33 NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 19 NA NA 0 0 24 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.63 NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177376 X 96425110 144522245 1 2 24 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 14.95 0.55 99.22 0 1 2 Whitelist MALY-DE 0.54 0.59 NA 0 0.48 0 No MALY-DE 4177376 MALY 0.59 1.91 Lymph-BNHL NA 4 0.08 NA 2 MALY-DE DO27809 4177376 female alive C83.3 other therapy partial response 73 439 439 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 14.44 MALY-DE::4177434 1 26759380 234560899 1 2 22 1 0 0 1 0 0.57 0.25 4 0.26 0.01 4 4 4 5 5 5 1.86 2.59 97.41 2 1 2 Whitelist MALY-DE 0.68 0.49 0.26 0.01 0.64 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 4 0.09 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 2 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 3 148118599 148190908 1 1 22 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 1.86 0.04 99.79 0 1 2 Whitelist MALY-DE 0.62 0.87 NA NA 0.59 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 4 152030722 152044108 1 1 22 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 1.86 0 99.8 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 6 74467926 117973956 4 4 22 0 1 1 2 0 0.57 0.04 3 0 0 NA NA NA 4 3 4 1.86 10.69 86.48 0 2 1 Whitelist MALY-DE 0.68 0.14 0 0 0.64 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 8 0.18 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 7 80932535 94605671 1 2 22 2 0 0 0 0 0.11 0.33 6 NA 0 6 3 4 9 3 5 1.86 9.07 90.7 0 4 1 Whitelist MALY-DE 0.54 0.58 NA 0 0.48 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 4 0.09 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 8 NA NA 0 0 22 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.56 NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 9 1258137 22251272 2 2 22 0 0 1 1 0 0.57 0.21 1 NA 0.04 NA NA NA NA NA NA 1.86 0 99.84 0 2 NA Whitelist MALY-DE 0.68 0.44 NA 0.04 0.64 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 4 0.09 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 14 106329457 106829594 1 1 22 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 1.86 0.47 99.05 0 1 NA Whitelist MALY-DE 0.62 0.11 NA NA 0.59 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 17 3833239 32108201 1 2 22 0 0 1 0 1 0.39 0.02 1 NA NA NA NA NA NA NA NA 1.86 0 99.98 0 2 NA Whitelist MALY-DE 0.68 0.08 NA NA 0.59 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 3 0.07 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177434 X 83441882 83462130 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 1.86 0.01 99.75 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4177434 MALY 0.96 2.03 Lymph-BNHL NA 2 0.05 NA 2 MALY-DE DO27815 4177434 female alive C83.3 other therapy complete response 16 860 860 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 28.29 MALY-DE::4177601 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 2 89161433 89246829 1 1 2 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 3.44 0.04 99.87 0 1 2 Whitelist MALY-DE 0.62 0.37 NA NA 0.59 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 2 0.5 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 14 NA NA 0 0 2 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MALY-DE NA 0.19 NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 18 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.17 NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177601 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177601 MALY 0.27 2.02 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27845 4177601 female alive C82.1 other therapy stable disease 52 840 840 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 27.63 MALY-DE::4177810 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 3 163237665 165595826 1 1 8 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 14.38 1.19 98.67 0 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 2 0.12 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 12 40062710 75081028 1 1 8 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 14.38 26.16 73.76 0 2 3 Whitelist MALY-DE 0.62 0.57 NA NA 0.59 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 2 0.12 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 14 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 16 3713299 3909293 2 2 8 2 0 0 0 0 0.11 0.02 2 NA 0 NA NA NA NA NA NA 14.38 0.01 99.88 0 1 2 Whitelist MALY-DE 0.54 0.07 NA 0 0.48 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 4 0.25 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 18 NA NA 0 0 8 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.07 NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177810 X NA NA 0 0 8 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.59 NA NA NA 0 No MALY-DE 4177810 MALY 0.64 2.15 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO27859 4177810 female alive C82.0 other therapy complete response 47 2287 2287 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.23 MALY-DE::4177856 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.52 NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 8 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.06 NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 12 27350045 28745965 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 6.56 1.04 98.87 0 1 2 Whitelist MALY-DE 0.62 0.39 NA NA 0.59 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 2 0.25 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 14 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.03 NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177856 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4177856 MALY 0.96 1.95 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO27821 4177856 male alive C83.7 other therapy partial response 10 1643 1643 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 54.05 MALY-DE::4177987 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 8 66719656 67397243 2 2 15 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 6.9 0 100 0 2 NA Whitelist MALY-DE 0.68 0.39 NA 0 0.64 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 4 0.13 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 10 38964812 109297003 5 8 15 0 1 2 2 3 0.53 0 8 0 0 8 8 8 11 11 11 6.9 18.98 80.84 0 1 2 Whitelist MALY-DE 0.62 0 0 0 0.64 1 High confidence MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL Canonical without polyploidization 13 0.43 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 13 30797831 31085156 1 1 15 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 6.9 0.25 99.75 0 1 2 Whitelist MALY-DE 0.62 0.66 NA NA 0.59 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 2 0.07 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 14 NA NA 0 0 15 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 12 10 10 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 18 NA NA 0 0 15 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.19 NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4177987 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 1 No MALY-DE 4177987 MALY 0.38 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27817 4177987 male alive C82.1 other therapy partial response 71 203 203 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 6.68 MALY-DE::4178310 1 163141518 164225432 1 1 10 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA 5 5 5 5.76 9.52 90.48 0 2 3 Whitelist MALY-DE 0.62 0.78 NA NA 0.59 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 2 0.1 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 2 89160767 89987081 3 3 10 2 0 1 0 0 0.3 0.05 3 0 0 NA NA NA NA NA NA 5.76 0.14 99.77 0 2 1 Whitelist MALY-DE 0.62 0.15 0 0 0.59 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 6 0.3 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 6 86260791 86333500 1 1 10 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 5.76 0.04 99.71 0 1 2 Whitelist MALY-DE 0.62 0.71 NA NA 0.59 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 2 0.1 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 8 NA NA 0 0 10 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.25 NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 14 106148136 106829596 2 2 10 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 5.76 0.61 83.91 0 1 2 Whitelist MALY-DE 0.54 0.02 0 0 0.48 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 4 0.2 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 22 NA NA 0 0 10 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.03 NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178310 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178310 MALY 0.72 1.94 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577560_G_A,CN:2 2 MALY-DE DO52696 4178310 male alive C83.7 other therapy complete response 10 2348 2348 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 77.24 MALY-DE::4178655 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 2 NA NA 0 0 32 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.92 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 3 61118343 61234140 1 1 32 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 22.16 0.06 99.8 0 1 2 Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 4 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 5 5422703 33409851 1 2 32 2 0 0 0 0 0.11 0 3 0 0.02 NA NA NA 6 3 4 22.16 25.03 71.86 0 3 2 Whitelist MALY-DE 0.54 0 0 0.02 0.48 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 4 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 6 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 7 110231073 110357944 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.16 0.08 99.69 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 8 NA NA 0 0 32 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA 0.88 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 9 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 11 38094323 38182955 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.16 0.07 99.51 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 12 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 13 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 14 106240195 106325141 3 3 32 2 0 1 0 0 0.3 0 3 0 0 NA NA NA 9 3 3 22.16 0.51 98.56 0 1 0 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 6 0.09 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 16 78516119 78672035 1 1 32 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA 5 5 5 22.16 95.02 0 0 1 3 Whitelist MALY-DE 0.62 0.44 NA NA 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 17 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 18 NA NA 0 0 32 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.44 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 22 NA NA 0 0 32 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4178655 X 32275170 32348931 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.16 99.95 0.05 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4178655 MALY 0.72 2.11 Lymph-BNHL NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 3 MALY-DE DO52664 4178655 male alive C82.0 other therapy disease progression 50 400 400 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.16 MALY-DE::4181460 1 2392422 2615412 1 1 28 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 9.7 24.65 75.35 0 2 NA Whitelist MALY-DE 0.62 0.9 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 2 NA NA 0 0 28 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 3 189423299 189542279 1 1 28 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 3 3 9.7 5.33 94.62 1 0 1 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 5 92343951 119403166 1 3 28 1 0 0 1 1 0.57 0.1 5 0 0 5 4 5 6 4 4 9.7 36.89 62.97 0 2 3 Whitelist MALY-DE 0.87 0.26 0 0 0.64 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 5 0.09 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 7 110175585 110404528 1 1 28 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA 6 3 6 9.7 97.36 0.09 0 3 4 Whitelist MALY-DE 0.62 0.87 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 8 20161049 111335939 1 3 28 0 1 1 1 0 0.8 0.05 3 0 0 NA NA NA NA NA NA 9.7 0.04 99.95 0 2 3 Whitelist MALY-DE 0.87 0.17 0 0 0.84 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 6 0.11 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 13 90580174 92294237 2 2 28 0 2 0 0 0 0.11 0.07 4 NA 0 4 0 3 5 0 3 9.7 1.49 84.36 0 2 3 Whitelist MALY-DE 0.54 0.21 NA 0 0.48 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 4 0.07 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 14 106110787 106370360 1 6 28 4 0 0 0 2 0.01 0 5 0 0 5 5 5 7 5 5 9.7 0.64 83.75 0 2 1 Whitelist MALY-DE 0.25 0 0 0 0.16 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 10 0.18 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 15 NA NA 0 0 28 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.77 NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 16 56684267 56714805 1 1 28 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 9.7 0 99.89 0 2 NA Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 19 12894068 13015455 1 1 28 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA 4 3 3 9.7 0.21 92.16 0 2 4 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 20 NA NA 0 0 28 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.7 NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 22 37511686 43261575 2 3 28 1 1 0 0 1 0.57 0 3 NA 0 NA NA NA 4 4 4 9.7 15.88 60.35 2 1 2 Whitelist MALY-DE 0.87 0.02 NA 0 0.64 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 5 0.09 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4181460 X 52950045 52964457 1 1 28 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.7 0 99.78 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4181460 MALY 0.39 2.09 Lymph-BNHL NA 2 0.04 NA 2 MALY-DE DO52675 4181460 female alive C83.3 other therapy complete response 70 358 358 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.78 MALY-DE::4182393 1 210105661 222512406 1 2 11 0 0 0 1 1 0.39 0.05 5 NA NA 5 5 5 9 9 9 7.18 27.27 72.73 0 3 2 Whitelist MALY-DE 0.68 0.16 NA NA 0.59 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 3 0.14 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 8 NA NA 0 0 11 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.69 NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 9 113786860 113797922 1 1 11 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 7.18 0 99.84 0 2 NA Whitelist MALY-DE 0.62 0.61 NA NA 0.59 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 13 91668586 92549175 1 1 11 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 7.18 0.76 99.24 0 2 3 Whitelist MALY-DE 0.62 0.57 NA NA 0.59 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 14 106330061 106967046 2 2 11 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 7.18 0.46 99.19 0 1 2 Whitelist MALY-DE 0.54 0 0 0 0.48 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 4 0.18 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 15 NA NA 0 0 11 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.13 NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 16 NA NA 0 0 11 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.5 NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 17 16013706 16026764 1 1 11 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 7.18 0 100 0 2 NA Whitelist MALY-DE 0.62 0.5 NA NA 0.59 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4182393 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4182393 MALY 0.95 1.95 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27763 4182393 male alive C83.7 other therapy complete response 10 2308 2308 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 75.92 MALY-DE::4184094 1 2348848 8427560 1 1 13 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.35 2.44 97.56 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 2 60268661 63448126 1 1 13 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 15.35 1.47 98.43 0 2 3 Whitelist MALY-DE 0.62 0.25 NA NA 0.59 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 6 163106920 163180117 1 1 13 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 4 3 3 15.35 31.75 68.1 0 1 2 Whitelist MALY-DE 0.62 0.14 NA NA 0.59 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 8 31411529 31423999 1 1 13 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 15.35 0 99.99 0 2 NA Whitelist MALY-DE 0.62 0.74 NA NA 0.59 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 10 NA NA 0 0 13 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.3 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 11 NA NA 0 0 13 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.31 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 12 NA NA 0 0 13 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.71 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 13 91855502 92249812 1 1 13 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 15.35 0.34 99.66 0 2 3 Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 2 0.08 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 14 NA NA 0 0 13 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.19 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 18 NA NA 0 0 13 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.15 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 19 NA NA 0 0 13 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.46 NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4184094 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4184094 MALY 0.8 2.05 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27857 4184094 female alive C83.3 other therapy partial response 57 161 161 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 5.3 MALY-DE::4188398 1 31461659 144870389 1 12 119 2 2 1 0 7 0.53 0.12 14 0 0 14 9 12 19 9 9 92.9 100 0 0 3 1 Whitelist MALY-DE 7 0.54 0.31 0 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 17 0.07 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 2 137112862 243022406 1 4 119 2 1 0 1 0 0.57 0.25 2 0 0 NA NA NA NA NA NA 92.9 95.84 4.06 1 2 3 Whitelist MALY-DE 0.68 0.48 0 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 8 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 3 20434668 186706866 1 9 119 5 1 1 0 2 0.04 0.2 14 0 0 14 4 7 15 4 7 92.9 99.57 0.4 0 4 2 Whitelist MALY-DE 0.41 0.43 0 0 0.38 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 16 0.07 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 4 79391310 79663116 2 2 119 0 0 1 1 0 0.57 0.14 2 0 0 NA NA NA 20 5 7 92.9 99.37 0.61 0 4 5 Whitelist MALY-DE 0.68 0.34 0 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 5 130748738 172601426 1 2 119 0 2 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 92.9 99.88 0 0 4 7 Whitelist MALY-DE 0.54 0.13 NA 0 0.48 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 6 27137726 114279061 1 3 119 2 1 0 0 0 0.3 0.56 7 0 0 7 3 3 9 3 4 92.9 76.21 23.58 1 4 2 Whitelist MALY-DE 0.62 0.79 0 0 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 6 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 7 16592923 110490608 1 11 119 6 0 0 0 5 0 0.01 20 0 0 20 18 20 25 19 21 92.9 93.55 3.47 0 4 2 Whitelist MALY-DE 1 0.1 0.06 0 0 0.03 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 17 0.07 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 8 NA NA 0 0 119 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.26 NA NA NA 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 9 21881548 132834184 1 9 119 5 2 0 0 2 0.02 0.03 7 0 0 7 3 5 7 3 5 92.9 79.55 19.75 0 6 2 Whitelist MALY-DE 1 0.54 0.1 0 0 0.33 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 16 0.07 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 10 24580420 79721574 1 3 119 2 1 0 0 0 0.3 0.38 4 0 0 4 3 4 5 3 3 92.9 99.75 0.07 0 4 2 Whitelist MALY-DE 0.62 0.63 0 0 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 6 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 11 6230064 125575506 1 4 119 2 1 0 0 1 0.3 0.66 7 0.03 0 7 4 6 8 4 4 92.9 99.57 0 0 3 4 Whitelist MALY-DE 0.62 0.87 0.03 0 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 7 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 12 11863879 90050268 1 5 119 3 2 0 0 0 0.14 0.51 6 0 0 6 4 6 7 5 7 92.9 99.8 0.12 0 4 2 Whitelist MALY-DE 0.62 0.75 0 0 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 10 0.04 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 13 50582681 50652602 1 1 119 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA 5 5 5 92.9 99.93 0.07 0 2 5 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 2 0.01 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 14 106111355 106236291 1 2 119 2 0 0 0 0 0.11 0.79 1 0 0 NA NA NA NA NA NA 92.9 99.09 0.43 0 4 NA Whitelist MALY-DE 0.54 0.94 0 0 0.48 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 15 NA NA 0 0 119 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 0 0 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 16 78836747 79197224 1 2 119 1 0 0 1 0 0.57 1 5 0 0 5 3 5 5 3 3 92.9 99.99 0 0 4 3 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 17 69698621 73353935 1 2 119 1 1 0 0 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 92.9 99.99 0 0 3 4 Whitelist MALY-DE 0.68 0.93 NA 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 18 50296811 77199109 1 2 119 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 4 3 3 92.9 98.38 0.46 0 2 4 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 4 0.02 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 19 53614966 57664110 4 4 119 0 0 2 2 0 0.26 0 3 0 0 NA NA NA 13 6 6 92.9 92.43 0.24 0 5 7 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 8 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 20 47572366 47659797 4 4 119 1 1 1 1 0 1 0.33 4 0 0 4 0 4 4 0 4 92.9 99.01 0 0 4 3 Whitelist MALY-DE 1 0.58 0 0 1 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 8 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 21 47649383 47788518 1 1 119 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 92.9 76.64 0 0 1 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 2 0.01 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 22 23040832 23236085 1 1 119 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 92.9 99.44 0.56 0 0 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 2 0.01 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188398 X 22343246 114194693 1 4 119 4 0 0 0 0 0.01 1 7 0 0 7 3 4 11 4 6 92.9 93.87 5.9 0 3 2 Whitelist MALY-DE 0.21 1 0 0 0.16 0 No MALY-DE 4188398 MALY 0.78 3.82 Lymph-BNHL NA 8 0.03 NA 4 MALY-DE DO52670 4188398 female deceased C83.3 other therapy stable disease 75 71 71 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 2.34 MALY-DE::4188879 1 207415828 216992433 1 2 11 0 0 1 1 0 0.57 0.05 5 NA 0 5 5 5 8 7 7 18.39 35.95 64.04 0 2 3 Whitelist MALY-DE 0.68 0.16 NA 0 0.64 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 4 0.18 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 3 NA NA 0 0 11 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.78 NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 9 21212313 22221285 1 1 11 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 18.39 0.71 99.15 0 0 2 Whitelist MALY-DE 0.62 0.61 NA NA 0.59 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 14 43274431 106725201 1 2 11 2 0 0 0 0 0.11 0 4 0 0 4 3 4 5 4 4 18.39 23.04 76.38 0 1 0 Whitelist MALY-DE 0.54 0 0 0 0.48 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 4 0.18 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 17 NA NA 0 0 11 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.5 NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 19 NA NA 0 0 11 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.42 NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 22 NA NA 0 0 11 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.31 NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188879 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188879 MALY 0.61 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52658 4188879 male alive C83.3 other therapy partial response 52 532 532 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 17.5 MALY-DE::4188900 1 69863750 69906370 1 1 17 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA 6 3 3 8.61 2.16 97.84 0 2 3 Whitelist MALY-DE 0.62 0.64 NA NA 0.59 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 2 189258167 189272413 1 1 17 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.61 0.13 99.77 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 3 60666163 60815216 1 1 17 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 8.61 0.08 99.79 0 2 3 Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 6 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 7 104736710 104965461 3 3 17 1 0 1 1 0 0.8 0.01 4 0 0 4 4 4 5 5 5 8.61 0.13 99.65 0 1 2 Whitelist MALY-DE 0.87 0.05 0 0 0.84 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 6 0.18 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 11 NA NA 0 0 17 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.41 NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 13 NA NA 0 0 17 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.69 NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 14 NA NA 0 0 17 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.67 NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 17 5958007 7589801 2 2 17 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 5 5 5 8.61 1.91 98.06 0 1 2 Whitelist MALY-DE 0.68 0.05 0 0 0.64 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 4 0.12 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 18 NA NA 0 0 17 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.62 NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 19 1923622 1939510 1 1 17 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 8.61 0 99.83 0 2 NA Whitelist MALY-DE 0.62 0.53 NA NA 0.59 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 2 0.06 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4188900 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4188900 MALY 0.51 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27805 4188900 male alive C82.0 other therapy complete response 76 503 503 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.55 MALY-DE::4189035 1 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 2 89160767 210373433 1 2 54 2 0 0 0 0 0.11 0.62 2 0 0 NA NA NA NA NA NA 17.06 0.15 96.75 0 1 2 Whitelist MALY-DE 0.54 0.84 0 0 0.48 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 3 32022580 71176959 2 2 54 0 0 1 1 0 0.57 0.28 1 0 0 NA NA NA NA NA NA 17.06 37.87 62.08 0 2 NA Whitelist MALY-DE 0.68 0.52 0 0 0.64 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 4 NA NA 0 0 54 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.51 NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 5 12638243 12796310 1 1 54 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 17.06 0.09 99.78 0 2 3 Whitelist MALY-DE 0.62 0.93 NA NA 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 6 6176354 53387314 1 2 54 1 1 0 0 0 0.57 0.77 5 NA 0 5 0 4 10 4 4 17.06 80.83 16.32 0 1 2 Whitelist MALY-DE 0.68 0.93 NA 0 0.64 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 7 88514835 88539271 1 1 54 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 17.06 0 99.78 0 2 NA Whitelist MALY-DE 0.62 0.62 NA NA 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 8 NA NA 0 0 54 0 0 0 0 0 NA 0.75 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.92 0.01 NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 9 21968962 22118444 2 2 54 2 0 0 0 0 0.11 0.16 4 0 0 4 0 3 4 0 3 17.06 0.11 99.2 0 2 0 Whitelist MALY-DE 0.54 0.37 0 0 0.48 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 10 37381933 63847113 1 2 54 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 17.06 0.12 99.7 0 2 1 Whitelist MALY-DE 0.54 1 NA 0 0.48 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 11 47888699 48014021 2 2 54 1 1 0 0 0 0.57 0.32 2 0 0 NA NA NA 5 3 3 17.06 37.84 58.33 0 4 6 Whitelist MALY-DE 0.68 0.57 0 0 0.64 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 12 83002770 83140013 1 1 54 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.06 0.1 99.82 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 13 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 14 106113000 106325846 2 2 54 0 0 0 2 0 0.11 0.24 2 0 0 NA NA NA NA NA NA 17.06 0.04 99.05 0 0 2 Whitelist MALY-DE 0.54 0.48 0 0 0.48 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 4 0.04 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 16 62073508 66755538 1 4 54 0 0 1 0 3 0.39 0.01 2 0 0 NA NA NA NA NA NA 17.06 4.78 95.11 0 1 2 Whitelist MALY-DE 1 0.06 0 0 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 5 0.05 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 17 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 18 14242437 14318622 1 1 54 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 17.06 65.06 34.9 0 2 NA Whitelist MALY-DE 0.62 0.87 NA NA 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 19 12761100 12861940 3 3 54 2 1 0 0 0 0.3 0 2 0 0 NA NA NA 17 5 13 17.06 99.08 0.75 0 2 3 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 6 0.06 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 22 22569653 23247167 1 1 54 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 17.06 1.32 98.68 0 1 2 Whitelist MALY-DE 0.62 0.72 NA NA 0.59 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 2 0.02 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189035 X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189035 MALY 0.48 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52665 4189035 male alive C83.3 other therapy complete response 46 232 232 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 7.63 MALY-DE::4189200 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 14 106112835 106325662 1 1 3 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 2.86 0.82 83.85 0 0 1 Whitelist MALY-DE 0.62 0 NA NA 0.59 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 2 0.33 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 18 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.01 NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189200 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189200 MALY 0.66 2.03 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27785 4189200 female alive C82.0 other therapy complete response 51 1925 1925 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 63.32 MALY-DE::4189998 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 2 89132281 90212252 3 3 12 0 0 2 1 0 0.3 0 3 0 0 NA NA NA NA NA NA 5.05 0.34 99.55 0 2 1 Whitelist MALY-DE 0.62 0 0 0 0.59 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 6 0.25 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 7 79877460 96134000 1 1 12 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 5.05 0.1 99.67 0 2 NA Whitelist MALY-DE 0.62 0.73 NA NA 0.59 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 2 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 8 NA NA 0 0 12 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.71 NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 13 91696134 93001134 1 1 12 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 5.05 1.13 98.87 0 2 3 Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 2 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 14 NA NA 0 0 12 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.57 NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4189998 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4189998 MALY 0.94 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27769 4189998 male alive C83.7 other therapy complete response 13 1206 1206 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 39.67 MALY-DE::4190495 1 191449668 217489096 2 2 15 0 0 2 0 0 0.11 0.03 11 0 0 11 11 11 13 13 13 12.89 21.66 78.34 0 2 3 Whitelist MALY-DE 0.54 0.1 0 0 0.48 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 4 0.13 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 2 89132281 89309477 2 2 15 1 1 0 0 0 0.57 0.03 4 0 0 4 0 4 5 0 0 12.89 0.07 99.84 0 0 1 Whitelist MALY-DE 0.68 0.12 0 0 0.64 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 4 0.13 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 3 116414543 116564853 1 1 15 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.89 0.08 99.79 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 2 0.07 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 6 74852063 109724514 1 1 15 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 12.89 20.38 79.48 0 1 2 Whitelist MALY-DE 0.62 0.46 NA NA 0.59 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 2 0.07 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 13 NA NA 0 0 15 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.66 NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 14 106329450 106791004 2 2 15 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 5 0 3 12.89 0.66 98.82 0 0 1 Whitelist MALY-DE 0.54 0.05 0 0 0.48 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 4 0.13 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 22 22764610 23247168 1 1 15 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 12.89 0.94 99.06 0 0 2 Whitelist MALY-DE 0.62 0.37 NA NA 0.59 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 2 0.07 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190495 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190495 MALY 0.84 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27767 4190495 male alive C83.3 other therapy complete response 15 420 420 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 13.82 MALY-DE::4190784 1 4753193 24231131 1 3 9 3 0 0 0 0 0.03 0.03 6 0.01 0 6 3 5 9 4 4 9.09 51.63 48.37 0 2 3 Whitelist MALY-DE 0.41 0.11 0.01 0 0.33 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 6 0.33 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 2 NA NA 0 0 9 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.77 NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 8 NA NA 0 0 9 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.21 NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 14 106212689 106829594 1 4 9 1 0 0 1 2 0.57 0 4 0 0 4 0 3 5 0 3 9.09 0.57 98.94 0 1 2 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 6 0.33 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 22 22677314 23241802 1 1 9 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 9.09 1.1 98.9 0 1 2 Whitelist MALY-DE 0.62 0.27 NA NA 0.59 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 2 0.11 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4190784 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4190784 MALY 0.87 1.97 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52668 4190784 male alive C83.7 other therapy complete response 4 2261 2261 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 74.38 MALY-DE::4191799 1 3567707 117092796 1 4 76 3 0 0 0 1 0.03 0.2 2 0 0 NA NA NA NA NA NA 10.64 10.67 89.33 0 1 2 Whitelist MALY-DE 0.54 0.42 0 0 0.33 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 7 0.05 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 2 64453593 169007564 1 3 76 0 1 1 0 1 0.57 1 4 0 0 4 3 4 4 3 4 10.64 27.05 72.86 2 2 3 Whitelist MALY-DE 0.87 1 0 0 0.64 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 5 0.03 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 3 NA NA 0 0 76 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.2 NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 4 69195627 94332568 6 6 76 2 0 2 2 0 0.57 0.04 2 0 0 NA NA NA 4 4 4 10.64 14.22 85.6 0 1 2 Whitelist MALY-DE 0.68 0.13 0 0 0.64 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 12 0.08 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 5 104480448 104508224 1 1 76 1 0 0 0 0 0.39 0.81 2 0 NA NA NA NA NA NA NA 10.64 0.02 99.85 0 1 2 Whitelist MALY-DE 0.62 0.96 0 NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 6 126355890 126371686 1 1 76 1 0 0 0 0 0.39 0.63 1 0 NA NA NA NA NA NA NA 10.64 0 99.83 0 2 NA Whitelist MALY-DE 0.62 0.84 0 NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 7 124493547 137468296 1 1 76 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 10.64 8.15 91.62 1 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 8 67474565 67488032 1 1 76 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.64 18.68 81.31 3 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 9 75879284 76000048 1 1 76 1 0 0 0 0 0.39 0.08 1 0 NA NA NA NA NA NA NA 10.64 10.75 89.12 0 2 NA Whitelist MALY-DE 0.62 0.22 0 NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 10 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 11 98830359 98865218 1 1 76 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 10.64 0.03 99.55 0 2 3 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 12 NA NA 0 0 76 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.81 NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 13 78877085 79980427 2 2 76 0 0 1 1 0 0.57 0.34 4 0 0 4 4 4 5 5 5 10.64 0.88 99.12 0 1 2 Whitelist MALY-DE 0.68 0.59 0 0 0.64 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 14 106069782 106539085 1 2 76 1 0 1 0 0 0.57 0.09 2 0 0 NA NA NA NA NA NA 10.64 0.4 98.85 1 0 2 Whitelist MALY-DE 0.68 0.25 0 0 0.64 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 15 45007978 45030120 1 1 76 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 10.64 15.43 79.79 0 0 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 16 11019617 11485166 1 2 76 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 7 4 4 10.64 21.05 78.86 0 1 0 Whitelist MALY-DE 0.54 1 NA 0 0.48 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 4 0.03 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 17 70782311 70944196 1 1 76 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA NA NA NA 10.64 0.2 99.8 0 1 2 Whitelist MALY-DE 0.62 0.71 0 NA 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 2 0.01 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 18 NA NA 0 0 76 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.9 NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 19 NA NA 0 0 76 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.87 NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 20 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 21 NA NA 0 0 76 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.2 0 NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 22 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4191799 X 1406749 86336731 1 3 76 2 0 0 1 0 0.3 0.11 6 0 0 6 3 5 8 3 5 10.64 75.01 24.99 0 1 2 Whitelist MALY-DE 0.62 0.28 0 0 0.59 0 No MALY-DE 4191799 MALY 0.71 1.98 Lymph-BNHL NA 6 0.04 NA 2 MALY-DE DO27847 4191799 male alive C85.2 other therapy complete response 16 887 887 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 29.18 MALY-DE::4193278 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 2 NA NA 0 0 6 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.66 NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 4 144009698 144440678 1 1 6 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 7.5 0.23 99.67 0 1 2 Whitelist MALY-DE 0.62 0.59 NA NA 0.59 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 2 0.17 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 6 NA NA 0 0 6 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.56 NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 8 NA NA 0 0 6 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.51 NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 14 106211909 106993813 1 2 6 2 0 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 7.5 0.62 99.05 0 0 2 Whitelist MALY-DE 0.54 0.06 NA 0 0.48 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 4 0.33 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 16 77967020 78220167 1 1 6 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 7.5 0.28 99.61 0 2 3 Whitelist MALY-DE 0.62 0.35 NA NA 0.59 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 2 0.17 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193278 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193278 MALY 0.59 2 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO27799 4193278 male alive C83.7 other therapy complete response 17 1042 1042 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 34.28 MALY-DE::4193638 1 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 2 89132275 228441588 1 7 52 3 1 1 0 2 0.28 0.01 8 0 0 8 4 8 9 4 4 46.23 53.33 46.57 0 2 3 Whitelist MALY-DE 0.77 0.05 0 0 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 12 0.12 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 3 60461592 60568375 1 1 52 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 46.23 0.05 99.9 0 1 2 Whitelist MALY-DE 0.62 0.81 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 4 87797074 92312933 1 2 52 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 3 46.23 0.09 99.88 0 2 1 Whitelist MALY-DE 0.68 1 0 0 0.64 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 5 NA NA 0 0 52 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.5 NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 6 86174595 149989451 1 7 52 2 1 0 0 4 0.3 0.04 9 0 0 9 6 7 10 6 7 46.23 86.63 13.23 0 2 1 Whitelist MALY-DE 0.77 0.13 0 0 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 10 0.1 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 7 137883016 138021937 1 1 52 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 46.23 0.09 99.69 0 1 2 Whitelist MALY-DE 0.62 0.76 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 8 38045241 38075892 1 1 52 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 46.23 20.14 79.85 0 2 NA Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 9 5379049 128867256 1 6 52 2 4 0 0 0 0.06 0 9 0 0 9 4 6 10 4 4 46.23 79.5 19.79 0 3 2 Whitelist MALY-DE 0.54 0.02 0 0 0.48 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 12 0.12 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 10 68268812 68409246 2 2 52 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA 4 0 3 46.23 99.8 0.01 0 1 2 Whitelist MALY-DE 0.54 1 NA 0 0.48 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 11 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 12 NA NA 0 0 52 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.91 NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 13 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 14 104146991 106960801 1 4 52 1 0 1 1 1 0.8 0 6 0 0 6 3 5 8 5 5 46.23 99.64 0 0 3 1 Whitelist MALY-DE 1 0 0 0 0.84 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 7 0.07 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 15 90915700 92968736 1 3 52 1 0 0 0 2 0.39 0.06 2 NA 0 NA NA NA 4 3 4 46.23 40.2 59.66 0 1 3 Whitelist MALY-DE 6 0.62 0.18 NA 0 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 4 0.04 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 16 79227245 79241126 1 1 52 0 1 0 0 0 0.39 0.16 2 NA NA NA NA NA 5 3 3 46.23 2.19 97.71 0 2 3 Whitelist MALY-DE 0.62 0.37 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 17 62723348 73351817 1 3 52 2 0 0 1 0 0.3 0.05 4 0 0 4 4 4 5 5 5 46.23 1 98.99 0 1 2 Whitelist MALY-DE 0.62 0.17 0 0 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 6 0.06 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 19 38987828 39170727 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 46.23 51.63 41.09 0 1 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4193638 X 7046349 7146013 1 1 52 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 46.23 99.71 0.06 0 2 3 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4193638 MALY 0.72 2.46 Lymph-BNHL NA 2 0.02 NA 3 MALY-DE DO52672 4193638 female alive C83.3 other therapy complete response 55 120 120 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 3.95 MALY-DE::4194218 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 8 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.06 NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 14 106330508 107034731 1 1 4 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 4.99 0.66 99.05 0 1 NA Whitelist MALY-DE 0.62 0 NA NA 0.59 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 2 0.25 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 22 22677325 23247171 1 1 4 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 4.99 1.11 98.89 0 1 2 Whitelist MALY-DE 0.62 0.16 NA NA 0.59 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 2 0.25 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194218 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194218 MALY 0.9 1.93 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 MALY-DE DO27775 4194218 male alive C83.7 other therapy complete response 4 510 510 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 16.78 MALY-DE::4194891 1 23216698 23905177 1 1 12 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.56 0.28 99.72 0 0 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 2 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 2 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 4 NA NA 0 0 12 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.41 NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 8 NA NA 0 0 12 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.31 NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 10 NA NA 0 0 12 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.27 NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 13 35715799 93117629 2 2 12 0 1 1 0 0 0.57 0 4 0 0 4 3 4 6 3 3 7.56 68.99 16.86 0 4 1 Whitelist MALY-DE 0.68 0 0 0 0.64 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 4 0.17 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 14 106329469 107113732 1 2 12 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 7.56 0.73 84.05 0 0 NA Whitelist MALY-DE 0.54 0 0 0 0.48 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 4 0.17 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4194891 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4194891 MALY 0.24 1.96 Lymph-BNHL NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 MALY-DE DO27825 4194891 male alive C83.7 other therapy complete response 4 1777 1777 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 58.45 MALY-DE::4196670 1 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 8 NA NA 0 0 19 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.49 NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 10 90705695 101989433 2 2 19 0 0 1 1 0 0.57 0.22 1 NA 0 NA NA NA NA NA NA 7.15 0 99.82 0 2 NA Whitelist MALY-DE 0.68 0.45 NA 0 0.64 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 4 0.11 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 11 78929958 118066852 4 9 19 1 2 0 1 5 0.57 0 6 0 0 6 6 6 11 11 11 7.15 11.01 88.56 0 1 2 Whitelist MALY-DE 0.62 0 0 0 0.64 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 13 0.34 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 13 NA NA 0 0 19 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist MALY-DE NA 0 0 NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 14 106329468 107183413 1 2 19 2 0 0 0 0 0.11 0.12 4 NA 0 4 0 3 4 0 3 7.15 0.79 99.09 0 2 0 Whitelist MALY-DE 0.54 0.3 NA 0 0.48 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 4 0.11 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 19 50104264 50190201 1 1 19 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 7.15 0.15 99.67 0 1 2 Whitelist MALY-DE 0.62 0.57 NA NA 0.59 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 2 0.05 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4196670 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4196670 MALY 0.63 2.01 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52673 4196670 female alive C83.0 other therapy complete response 60 720 720 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 23.68 MALY-DE::4198542 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 3 60590072 60605553 1 1 9 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 13.47 99.95 0 0 4 NA Whitelist MALY-DE 0.62 0.72 NA NA 0.59 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 2 0.11 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 4 66883046 84127333 1 2 9 1 1 0 0 0 0.57 0.12 3 NA 0 NA NA NA NA NA NA 13.47 0.45 99.53 0 2 1 Whitelist MALY-DE 0.68 0.3 NA 0 0.64 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 4 0.22 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 6 14131393 15422838 1 1 9 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 13.47 0.75 99.1 0 1 2 Whitelist MALY-DE 0.62 0.68 NA NA 0.59 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 2 0.11 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 9 21913987 22035803 1 2 9 2 0 0 0 0 0.11 0.05 4 NA 0 4 3 4 7 4 4 13.47 39.12 57.7 0 1 0 Whitelist MALY-DE 0.54 0.15 NA 0 0.48 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 4 0.22 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 10 90509983 90883204 1 1 9 0 0 1 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 13.47 0.28 99.54 0 1 2 Whitelist MALY-DE 0.62 0.6 NA NA 0.59 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 2 0.11 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 15 42478885 93567377 1 2 9 1 1 0 0 0 0.57 0.02 2 NA 0 NA NA NA 4 3 4 13.47 4.76 90.46 0 1 2 Whitelist MALY-DE 0.68 0.09 NA 0 0.64 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 4 0.22 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4198542 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4198542 MALY 0.22 2.16 Lymph-BNHL NA 0 0 NA 3 MALY-DE DO52649 4198542 female alive C82.0 other therapy complete response 68 273 273 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 8.98 MALY-DE::4199714 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 2 61786045 61882961 2 2 30 1 1 0 0 0 0.57 0.31 1 0 0 NA NA NA 7 3 4 8.57 0.16 96.96 0 2 NA Whitelist MALY-DE 0.68 0.56 0 0 0.64 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 4 0.07 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 3 NA NA 0 0 30 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.71 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 4 61427848 61465922 1 1 30 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 8.57 0.02 99.76 0 2 3 Whitelist MALY-DE 0.62 0.33 NA NA 0.59 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 5 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 6 75467350 148193623 1 2 30 1 1 0 0 0 0.57 0.1 2 0 0 NA NA NA NA NA NA 8.57 19.74 80 2 1 2 Whitelist MALY-DE 0.68 0.27 0 0 0.64 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 4 0.07 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 7 5557962 5596546 1 2 30 1 0 1 0 0 0.57 0.22 1 0 0 NA NA NA NA NA NA 8.57 26.41 73.35 0 1 NA Whitelist MALY-DE 0.68 0.45 0 0 0.64 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 4 0.07 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 8 NA NA 0 0 30 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.42 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 9 NA NA 0 0 30 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.58 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 10 42466478 42480726 1 1 30 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 4 4 8.57 11.83 87.97 0 2 3 Whitelist MALY-DE 0.62 0.16 NA NA 0.59 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 11 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 12 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 14 106240134 106326637 1 1 30 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 4 4 4 8.57 0.66 99.05 0 1 2 Whitelist MALY-DE 0.62 0.48 NA NA 0.59 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 15 NA NA 0 0 30 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.43 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 16 10717425 11124813 1 1 30 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 8.57 0 99.89 0 2 NA Whitelist MALY-DE 0.62 0.78 NA NA 0.59 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 17 NA NA 0 0 30 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.16 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 19 38406885 38511715 1 1 30 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 8.57 0.18 99.65 0 1 2 Whitelist MALY-DE 0.62 0.69 NA NA 0.59 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 2 0.03 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199714 X NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 1 NA NA NA 0 No MALY-DE 4199714 MALY 0.69 1.92 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52674 4199714 female alive C83.3 other therapy complete response 53 2762 2762 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 90.86 MALY-DE::4199996 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 2 77794608 77850453 1 1 11 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 14.63 0.2 96.71 0 1 2 Whitelist MALY-DE 0.62 1 NA NA 0.59 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 3 112012064 141295112 1 1 11 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 14.63 14.79 85.16 0 1 2 Whitelist MALY-DE 0.62 0.78 NA NA 0.59 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 5 NA NA 0 0 11 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.75 NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 6 NA NA 0 0 11 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.1 NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 14 NA NA 0 0 11 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.15 NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 18 9170665 60817176 1 4 11 2 0 0 0 2 0.11 0 4 0 0 4 4 4 5 5 5 14.63 0.39 99.59 0 1 2 Whitelist MALY-DE 0.54 0 0.01 0 0.48 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 6 0.27 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 20 29812990 29833528 1 1 11 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 14.63 0.03 99 0 2 3 Whitelist MALY-DE 0.62 0.44 NA NA 0.59 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 2 0.09 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist MALY-DE NA NA NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MALY-DE::4199996 X NA NA 0 0 11 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MALY-DE NA 0.27 NA NA NA 0 No MALY-DE 4199996 MALY 0.41 1.99 Lymph-BNHL NA 0 0 NA 2 MALY-DE DO52667 4199996 male alive C82.0 other therapy stable disease 73 339 339 Smoking history not documented NA Don't know/Not sure Not Documented Included Lymph-BNHL MALY DE 1 11.15 MELA-AU::MELA-0001 1 151412916 151613624 1 1 460 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 12 3 5 58.42 91 5.91 0 2 4 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 2 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 2 13956917 238166954 1 6 460 2 0 1 0 3 0.3 0 6 0 0 6 4 6 6 4 6 58.42 99.99 0 0 3 4 Whitelist MELA-AU 0.54 0 0 0 0.59 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 9 0.01 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 3 104771093 184521752 2 2 460 0 1 0 1 0 0.57 0.02 11 0 0 11 9 11 26 9 9 58.42 99.89 0 0 4 3 Whitelist MELA-AU 0.68 0.09 0 0 0.64 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 4 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 4 18741843 110768809 16 44 460 4 1 6 5 28 0.32 0 68 0 0 68 7 13 71 7 7 58.42 34.49 62.95 18 2 4 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 60 0.07 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 5 20025209 45767559 4 18 460 0 2 0 2 14 0.26 0.04 31 0 0 31 5 7 57 9 10 58.42 46.52 53.36 5 6 4 Whitelist MELA-AU 11 0.68 0.15 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 22 0.02 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 6 83717381 141645435 1 2 460 1 1 0 0 0 0.57 0 4 0 0 4 0 3 19 4 7 58.42 38.89 58.28 0 2 3 Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 4 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 7 133986902 141851028 1 1 460 1 0 0 0 0 0.39 0 3 0 0 NA NA NA 4 4 4 58.42 84.94 14.84 0 2 3 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 2 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 8 54422125 99862970 14 45 460 4 6 2 2 31 0.37 0 57 0 0 57 4 7 86 5 7 58.42 66.42 30.11 3 4 5 Whitelist MELA-AU 11_4 0.54 0 0 0 0.59 1 Low confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 59 0.06 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 9 30783012 30794783 1 1 460 0 0 1 0 0 0.39 0.55 2 0 NA NA NA NA 15 5 5 58.42 25.68 73.62 0 2 3 Whitelist MELA-AU 0.62 0.77 0 NA 0.59 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 2 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 10 79049622 79060195 1 1 460 0 0 1 0 0 0.39 0.82 2 0 NA NA NA NA 23 5 7 58.42 17.55 78.6 0 3 8 Whitelist MELA-AU 0.62 0.96 0 NA 0.59 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 2 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 11 57335469 97526275 56 79 460 10 15 19 12 23 0.35 0 95 0 0 95 7 9 118 7 9 58.42 84.4 12.14 19 11 10 Whitelist MELA-AU 5 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 135 0.15 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 12 39086800 39291355 2 5 460 1 0 1 0 3 0.57 0 4 0 0 4 4 4 57 4 6 58.42 33.97 62.29 1 16 18 Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 7 0.01 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 13 45826108 107863760 2 8 460 1 0 0 1 6 0.57 0.61 7 0 0 7 0 5 10 3 5 58.42 11.02 86.09 0 2 4 Whitelist MELA-AU 11 0.28 0.82 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 10 0.01 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 14 NA NA 0 0 460 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 0 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 15 63218952 93449876 1 8 460 0 0 0 2 6 0.11 0.67 11 0 0 11 4 6 15 5 7 58.42 80.12 19.88 0 4 3 Whitelist MELA-AU 0.62 0.87 0 0 0.48 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 10 0.01 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 16 NA NA 0 0 460 0 0 0 0 0 NA 0.31 NA 0 NA NA NA NA 23 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.56 0 NA NA 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 0 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 17 34979941 39797502 8 21 460 5 2 1 0 13 0.07 0 25 0 0 25 3 6 44 4 9 58.42 92.07 3.42 0 3 16 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 29 0.03 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 18 NA NA 0 0 460 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 0 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 19 28326840 34678838 5 9 460 0 1 2 2 4 0.53 0 16 0 0 16 4 5 29 4 5 58.42 41.72 51.01 3 5 6 Whitelist MELA-AU 4 0.62 0 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 14 0.02 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 20 39764227 44975184 2 5 460 0 1 0 1 3 0.57 0.87 4 0 0 4 3 4 12 5 5 58.42 98.94 0 0 5 4 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 7 0.01 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 21 14418868 17604040 1 12 460 0 3 0 0 9 0.03 0 14 0 0 14 3 4 17 3 4 58.42 77.35 0 0 14 3 Whitelist MELA-AU 0.62 0 0 0 0.33 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 15 0.02 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 22 NA NA 0 0 460 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma NA 0 0 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0001 X 56111488 86016795 1 15 460 1 0 0 1 13 0.57 1 17 0 0 17 3 4 19 3 3 58.42 6.47 89.64 4 2 4 Whitelist MELA-AU 11 0.54 1 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0001 MELA 0.75 3.01 Skin-Melanoma With other complex events 17 0.02 NA 9 MELA-AU DO220841 MELA-0001 female alive C43.7 surgery unknown 67 6080 6080 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 200 MELA-AU::MELA-0002 1 31026622 248811720 1 34 748 2 9 1 1 21 0 0 42 0 0 42 8 13 52 8 8 49.47 61.38 35.41 4 3 2 Whitelist MELA-AU 11_18_2_3_5 0.62 0.02 0 0 0.11 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 47 0.03 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 2 11161529 144813240 2 25 748 2 1 1 2 19 0.88 0.21 34 0 0 34 12 14 56 18 22 49.47 37.89 59.41 0 3 2 Whitelist MELA-AU 22_7 0.81 0.44 0 0 0.91 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 31 0.02 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 3 69823911 79435315 25 28 748 9 6 5 5 3 0.63 0 31 0 0 31 8 11 97 8 11 49.47 41.04 58.82 0 8 6 Whitelist MELA-AU 0.9 0 0 0 0.71 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 53 0.04 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 False positive; manually removed MELA-AU::MELA-0002 4 40629212 44243265 2 3 748 1 1 0 0 1 0.57 0 5 0 0 5 0 3 30 9 9 49.47 25.24 74.56 0 2 1 Whitelist MELA-AU 0.62 0 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 5 0 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 5 759044 45795365 71 135 748 13 26 15 17 64 0.13 0 122 0 0 122 10 12 175 10 12 49.47 63.31 34.01 18 2 4 Whitelist MELA-AU 11_14 0.54 0 0 0 0.57 0 High confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 206 0.14 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 6 2351573 165900506 1 23 748 1 7 0 1 14 0 0.01 37 0 0 37 7 7 39 7 8 49.47 67.35 32.5 1 4 2 Whitelist MELA-AU 15_2_X 0.54 0.06 0 0 0.11 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 32 0.02 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 7 1508469 101805272 73 113 748 12 15 22 24 40 0.15 0 137 0 0 137 10 14 161 10 14 49.47 59.3 40.47 17 4 5 Whitelist MELA-AU 11_2_22_3 0.62 0 0 0 0.59 0 High confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 186 0.12 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 8 8397015 136746081 1 19 748 3 9 0 0 7 0 0.01 45 0 0 45 4 8 49 6 6 49.47 70.06 26.41 2 7 8 Whitelist MELA-AU 0.51 0.05 0 0 0.03 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 31 0.02 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 9 479918 2290189 4 4 748 0 2 1 1 0 0.57 0.85 1 0 0 NA NA NA 26 5 5 49.47 60.99 38.31 0 1 NA Whitelist MELA-AU 0.68 0.99 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 8 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 10 9900422 55104994 2 2 748 0 1 0 1 0 0.57 0.01 11 0 0 11 4 7 34 9 9 49.47 40.1 59.68 1 1 2 Whitelist MELA-AU 0.68 0.03 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 4 0 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 11 48612434 104669302 34 83 748 10 7 8 9 49 0.9 0 113 0 0 113 7 10 130 7 10 49.47 46.8 49.7 0 4 2 Whitelist MELA-AU 5_7 0.68 0 0 0 0.92 0 High confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 117 0.08 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 12 5372395 114052484 1 12 748 1 6 0 0 5 0 0 18 0 0 18 6 8 25 6 8 49.47 33.64 62.61 0 2 1 Whitelist MELA-AU 20 0.07 0.01 0 0 0.09 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 19 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 13 47365441 58678215 5 5 748 1 0 2 2 0 0.53 0 11 0 0 11 8 11 23 11 11 49.47 28.83 68.26 0 2 3 Whitelist MELA-AU 0.68 0.02 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 10 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 14 43855218 104600368 1 5 748 0 5 0 0 0 0 0.01 10 0 0 10 6 9 12 7 7 49.47 1.96 98.04 0 2 3 Whitelist MELA-AU 0.1 0.03 0 0 0.07 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma Canonical without polyploidization 10 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 15 31430507 83524540 4 9 748 2 1 0 1 5 0.57 1 11 0 0 11 5 9 24 5 9 49.47 67.38 27.67 1 2 3 Whitelist MELA-AU 6 0.54 1 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 13 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 16 5375859 76667412 1 6 748 1 5 0 0 0 0.01 0 15 0 0 15 5 7 18 5 5 49.47 10.62 84.94 0 2 1 Whitelist MELA-AU 0.25 0.02 0 0 0.19 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 12 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 17 63710548 71955453 10 21 748 3 3 2 2 11 0.94 0 18 0 0 18 4 7 31 5 5 49.47 19.25 80.63 0 3 2 Whitelist MELA-AU 2_7 0.89 0 0 0 0.96 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 31 0.02 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 18 19034698 74083616 10 14 748 3 2 2 3 4 0.94 0.11 21 0 0 21 7 10 30 7 7 49.47 95.24 0 6 3 4 Whitelist MELA-AU 0.98 0.29 0 0 0.96 0 High confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 24 0.02 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 19 19474348 57420179 1 8 748 0 4 1 0 3 0.04 1 23 0 0 23 7 18 27 7 18 49.47 83.94 8.59 1 2 3 Whitelist MELA-AU 18 0.28 1 0 0 0.36 0 Linked to high confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 13 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 20 20372345 55535969 1 6 748 1 1 0 0 4 0.57 0.01 9 0 0 9 5 5 16 6 7 49.47 90.6 1.65 0 3 2 Whitelist MELA-AU 12 0.54 0.04 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 8 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 21 20030087 25546909 1 4 748 0 1 0 1 2 0.57 0.13 5 0 0 5 3 5 13 5 6 49.47 51.71 26.02 0 1 2 Whitelist MELA-AU 0.68 0.32 0 0 0.64 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 6 0 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 22 17741148 36618400 6 14 748 1 1 2 2 8 0.88 0 13 0 0 13 6 8 21 7 11 49.47 28.5 60.39 1 2 3 Whitelist MELA-AU 2_7 0.62 0 0 0 0.91 0 Low confidence MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma With other complex events 20 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0002 X 5845699 121926738 1 8 748 1 3 0 0 4 0.11 0 8 0 0 8 8 8 9 9 9 49.47 97.69 2.31 0 1 2 Whitelist MELA-AU 6 0.62 0 0 0 0.48 0 No MELA-AU MELA-0002 MELA 0.54 2.62 Skin-Melanoma NA 12 0.01 NA 2 MELA-AU DO220842 MELA-0002 male deceased C43.6 surgery unknown 75 2464 2464 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 81.05 MELA-AU::MELA-0003 1 15885881 58152236 71 308 1187 20 20 15 16 237 0.76 0 160 0 0 160 6 6 174 7 7 28.07 14.02 85.98 30 3 2 Whitelist MELA-AU 12_5 0.56 0 0 0 0.84 1 Low confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma With other complex events 379 0.16 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 2 19796606 242063140 1 14 1187 7 4 0 0 3 0.01 0 23 0 0 23 9 23 24 9 9 28.07 7.68 92.23 0 2 1 Whitelist MELA-AU 0.23 0 0 0 0.16 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 25 0.01 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 3 113656136 175358630 3 6 1187 1 1 0 1 3 0.8 0 7 0 0 7 7 7 21 15 15 28.07 3.61 96.27 0 2 3 Whitelist MELA-AU 4 0.62 0 0 0 0.84 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 9 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 4 41842565 58016947 2 4 1187 0 0 2 2 0 0.26 0 6 0 0 6 5 6 15 7 7 28.07 94.21 5.69 0 2 1 Whitelist MELA-AU 0.62 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma Canonical without polyploidization 8 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 5 1296136 45874996 33 109 1187 10 7 6 10 76 0.67 0 52 0 0 52 11 27 91 11 14 28.07 26.21 73.66 8 3 2 Whitelist MELA-AU 12 0.68 0 0 0 0.75 1 High confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma With other complex events 142 0.06 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 6 NA NA 0 0 1187 0 0 0 0 0 NA 0 NA NA NA NA NA NA 7 3 6 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 0 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 7 6585882 133822059 1 9 1187 2 4 0 0 3 0.06 0 8 0 0 8 6 8 11 7 7 28.07 2.26 97.49 0 2 3 Whitelist MELA-AU 0.41 0 0 0 0.48 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 15 0.01 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 8 5403572 130893168 1 5 1187 1 4 0 0 0 0.04 0 8 0 0 8 8 8 9 9 9 28.07 0.99 99 1 2 3 Whitelist MELA-AU 0.45 0 0 0 0.36 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 10 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 9 24544471 36364603 6 6 1187 0 3 1 2 0 0.34 0 7 0 0 7 7 7 8 8 8 28.07 20.14 79.16 0 2 1 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma Canonical without polyploidization 12 0.01 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 10 90909442 127269377 1 3 1187 0 2 0 1 0 0.3 0 4 0 0 4 4 4 5 5 5 28.07 99.02 0.8 0 1 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 6 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 11 30432698 122632841 1 6 1187 3 2 1 0 0 0.34 0 9 0 0 9 6 9 10 6 6 28.07 18.99 80.58 0 1 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 12 0.01 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 12 43076099 128657837 536 881 1187 150 120 130 136 345 0.32 0 377 0 0 377 11 24 382 11 14 28.07 59.41 36.46 62 3 1 Whitelist MELA-AU 1_4 0.54 0 0 0 0.59 1 High confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma With other complex events 1417 0.6 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 13 39019562 93665362 1 4 1187 0 2 0 0 2 0.11 0 6 0 0 6 6 6 7 7 7 28.07 2.58 97.42 0 2 3 Whitelist MELA-AU 5 0.54 0 0 0 0.48 1 Linked to high confidence MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma Canonical without polyploidization 6 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 14 42151261 47649205 1 3 1187 1 2 0 0 0 0.3 0 5 0 0 5 5 5 5 5 5 28.07 1.4 97.71 0 2 3 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 6 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 15 38564009 75919497 1 2 1187 1 1 0 0 0 0.57 0 2 NA 0 NA NA NA NA NA NA 28.07 0.05 99.83 0 2 3 Whitelist MELA-AU 0.68 0 NA 0 0.64 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 4 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 16 31481555 31697256 1 1 1187 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 28.07 0.24 99.64 0 2 3 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 2 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 17 19688282 73527252 1 4 1187 1 3 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 28.07 0.06 99.92 0 2 3 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 8 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 18 24868180 40784526 1 2 1187 0 2 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 28.07 5.1 94.86 0 2 3 Whitelist MELA-AU 0.54 0 NA 0 0.48 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 4 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 19 44094141 44183637 2 2 1187 0 1 0 1 0 0.57 0 1 0 0 NA NA NA 8 3 3 28.07 4.89 94.94 0 2 NA Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 4 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 20 10991372 41088480 1 2 1187 0 2 0 0 0 0.11 0 4 0 0 4 4 4 5 5 5 28.07 4.68 94.35 0 2 3 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 4 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 21 NA NA 0 0 1187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 0 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 22 NA NA 0 0 1187 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.01 NA NA NA 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 0 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0003 X 7166885 107280677 1 4 1187 2 2 0 0 0 0.26 0 6 0 0 6 3 6 9 3 3 28.07 99.16 0.61 0 1 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0003 MELA 0.96 1.84 Skin-Melanoma NA 8 0 NA 17 MELA-AU DO220843 MELA-0003 female deceased C43.7 surgery unknown 79 519 519 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.07 MELA-AU::MELA-0005 1 NA NA 0 0 220 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 2 48024351 48279255 1 1 220 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 6 3 3 27.8 12.43 87.46 0 1 NA Whitelist MELA-AU 0.62 0 0 NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 3 23150868 51689919 1 2 220 0 2 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 27.8 0.02 99.86 0 2 3 Whitelist MELA-AU 0.54 0 0 0 0.48 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 4 65087175 67281841 1 1 220 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 27.8 1.15 98.83 0 1 2 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 5 1027171 19705107 13 38 220 3 3 2 5 25 0.69 0 25 0 0 25 5 6 50 6 7 27.8 27.21 70.13 3 1 6 Whitelist MELA-AU 9 0.88 0 0 0 0.77 0 Linked to low confidence MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma With other complex events 51 0.12 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 6 8393693 111434013 11 35 220 2 5 2 2 24 0.48 0 53 0 0 53 6 7 55 6 7 27.8 73.29 23.52 8 3 1 Whitelist MELA-AU 5 0.62 0 0 0 0.64 0 Low confidence MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma With other complex events 46 0.1 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 7 105590325 105656727 1 1 220 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 5 6 27.8 2.43 94.99 0 2 3 Whitelist MELA-AU 0.62 0.02 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 8 NA NA 0 0 220 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 9 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.45 0 NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 9 3407818 22069769 1 18 220 2 0 0 1 15 0.3 0 15 0 0 15 5 5 16 5 5 27.8 99.77 0 0 1 0 Whitelist MELA-AU 5 0.87 0 0 0 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 21 0.05 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 10 NA NA 0 0 220 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 11 78619623 104782805 22 34 220 4 6 6 6 12 0.91 0 60 0 0 60 4 5 127 7 7 27.8 54.93 44.65 10 13 4 Whitelist MELA-AU 5_6 0.93 0 0 0 0.93 0 Low confidence MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma With other complex events 56 0.13 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 12 75537684 76482517 2 2 220 2 0 0 0 0 0.11 0.2 4 0 0 4 3 4 11 6 6 27.8 4.26 91.99 0 1 0 Whitelist MELA-AU 0.54 0.42 0 0 0.48 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 13 90731668 90839969 1 1 220 1 0 0 0 0 0.39 0.26 2 0 NA NA NA NA NA NA NA 27.8 0.09 99.78 0 1 2 Whitelist MELA-AU 0.62 0.51 0 NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 14 34513407 103694360 1 9 220 2 1 1 0 5 0.57 0.24 12 0 0 12 5 9 13 5 5 27.8 6.69 92.4 0 2 1 Whitelist MELA-AU 0.54 0.48 0 0 0.64 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 13 0.03 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 15 40677571 91186167 1 2 220 0 0 0 1 1 0.39 0.3 3 NA NA NA NA NA NA NA NA 27.8 2.71 97.29 0 2 1 Whitelist MELA-AU 14 0.68 0.55 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 3 0.01 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 16 47355051 74543855 2 5 220 1 0 0 1 3 0.57 0.53 4 0 0 4 4 4 9 9 9 27.8 42.6 57.3 3 1 2 Whitelist MELA-AU 0.93 0.76 0 0 0.64 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 7 0.02 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 17 62195464 62382900 1 1 220 0 1 0 0 0 0.39 0.3 1 NA NA NA NA NA 7 4 4 27.8 53.52 42.04 0 3 NA Whitelist MELA-AU 0.62 0.54 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 18 40257519 40280024 1 1 220 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 27.8 28.84 71.1 0 2 NA Whitelist MELA-AU 0.62 0.12 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 19 NA NA 0 0 220 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 20 NA NA 0 0 220 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 21 NA NA 0 0 220 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 22 41900756 45025354 1 1 220 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 27.8 29.87 59.02 0 2 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0005 X NA NA 0 0 220 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.11 NA NA NA 0 No MELA-AU MELA-0005 MELA 0.79 1.98 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220844 MELA-0005 female deceased C43.7 surgery unknown 58 4870 4870 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 160.2 MELA-AU::MELA-0007 1 51996045 52055697 1 1 377 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 4 3 4 86.84 95.97 1.06 0 3 NA Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 2 25003677 25037494 2 2 377 0 0 1 1 0 0.57 0 3 NA 0 NA NA NA NA NA NA 86.84 99.88 0.01 0 3 2 Whitelist MELA-AU 0.68 0 NA 0 0.64 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 3 105610140 105645270 1 1 377 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 10 6 6 86.84 99.71 0.13 0 2 4 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 4 114578531 115793648 1 1 377 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 7 5 5 86.84 99.81 0 0 4 6 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 5 265764 28190999 3 6 377 1 1 0 1 3 0.8 0.04 11 0 0 11 8 9 22 10 10 86.84 78.97 18.36 0 2 3 Whitelist MELA-AU 12 0.62 0.15 0 0 0.84 1 Linked to high confidence MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma Canonical without polyploidization 9 0.01 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 6 158254286 158274648 2 2 377 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 5 3 5 86.84 99.97 0 0 4 NA Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 7 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 4 7 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 8 3242350 72370952 29 39 377 6 8 8 7 10 0.94 0 59 0 0 59 8 19 62 8 21 86.84 86.68 9.9 13 4 2 Whitelist MELA-AU 0.84 0 0 0 0.96 1 High confidence MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma With other complex events 68 0.09 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 9 9654286 66858139 80 202 377 17 25 17 21 122 0.53 0 156 0 0 156 7 10 160 7 10 86.84 96.49 2.84 21 1 3 Whitelist MELA-AU 12 0.68 0 0 0 0.64 1 High confidence MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma With other complex events 282 0.37 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 10 44352751 44364500 1 1 377 1 0 0 0 0 0.39 0.04 1 0 NA NA NA NA 6 3 4 86.84 1.81 94.84 0 2 NA Whitelist MELA-AU 0.62 0.13 0 NA 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 11 NA NA 0 0 377 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 12 20581752 32372625 6 17 377 0 1 2 3 11 0.34 0 21 0 0 21 11 21 47 16 17 86.84 85.25 14.74 2 3 2 Whitelist MELA-AU 5_9 0.68 0 0 0 0.59 1 High confidence MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma With other complex events 23 0.03 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 13 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 6 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 14 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 15 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 16 29917829 29996898 1 1 377 0 1 0 0 0 0.39 0.05 2 0 NA NA NA NA 13 5 7 86.84 99.13 0.77 0 3 4 Whitelist MELA-AU 0.62 0.17 0 NA 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 17 11730330 16437451 3 3 377 2 0 0 1 0 0.3 0.02 8 0 0 8 6 8 13 6 10 86.84 73.02 21.71 0 2 4 Whitelist MELA-AU 0.62 0.07 0 0 0.59 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 6 0.01 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 18 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 19 NA NA 0 0 377 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 14 8 10 0 0 0 0 0 0 Whitelist MELA-AU NA 0.04 NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 20 NA NA 0 0 377 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 12 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0.62 NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 21 NA NA 0 0 377 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 22 24125398 51210651 67 171 377 19 17 18 13 104 0.74 0 150 0 0 150 6 9 154 6 9 86.84 58.38 41.42 16 5 7 Whitelist MELA-AU 1 0 0 0 0.82 1 Low confidence MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma With other complex events 238 0.32 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0007 X NA NA 0 0 377 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0007 MELA 0.69 3.61 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220845 MELA-0007 female deceased C43.7 surgery complete response 69 2717 2717 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 89.38 MELA-AU::MELA-0008 1 2210623 2433707 2 2 142 0 0 1 1 0 0.57 0.04 2 0 0 NA NA NA 22 4 5 81.78 99.9 0.1 0 2 3 Whitelist MELA-AU 0.68 0.14 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 2 95947919 224854664 1 3 142 2 1 0 0 0 0.3 0.01 5 0 0 5 5 5 8 5 5 81.78 99.76 0.14 0 4 2 Whitelist MELA-AU 0.62 0.06 0 0 0.59 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 6 0.02 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 3 1881949 116358406 2 2 142 0 2 0 0 0 0.11 0.62 14 0 0 14 4 6 17 4 7 81.78 96.56 0.29 0 3 4 Whitelist MELA-AU 0.54 0.84 0 0 0.48 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 4 73890749 178860773 1 2 142 0 1 1 0 0 0.57 0.06 5 0 0 5 3 5 5 3 3 81.78 99.79 0 0 3 1 Whitelist MELA-AU 0.68 0.2 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 5 1104895 11386243 12 14 142 0 5 5 2 2 0.11 0 10 0 0 10 3 6 20 3 3 81.78 96.58 0.74 0 3 5 Whitelist MELA-AU 12 0.62 0.02 0 0 0.48 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 26 0.09 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 6 70567415 71888825 2 2 142 0 0 1 1 0 0.57 0.21 6 0 0 6 6 6 22 12 12 81.78 39.69 60.16 14 2 3 Whitelist MELA-AU 0.68 0.44 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 7 77701429 78001803 1 1 142 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 11 5 5 81.78 97.44 0 0 6 8 Whitelist MELA-AU 0.62 0.04 NA NA 0.59 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 8 33347522 145076085 1 10 142 4 4 0 1 1 0.13 0.18 24 0 0 24 4 6 25 4 6 81.78 96.58 0 0 8 6 Whitelist MELA-AU 0.62 0.39 0 0 0.55 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 19 0.07 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 9 21711690 22977175 7 7 142 2 0 3 2 0 0.44 0.08 7 0 0 7 7 7 11 7 7 81.78 99.3 0 0 4 0 Whitelist MELA-AU 0.68 0.22 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 14 0.05 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 False positive; manually removed MELA-AU::MELA-0008 10 393976 17651351 1 2 142 1 1 0 0 0 0.57 0.07 4 NA 0.04 4 3 4 5 3 3 81.78 99.71 0.11 0 3 2 Whitelist MELA-AU 0.68 0.21 NA 0.04 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 11 77104049 134650672 8 14 142 4 3 0 1 6 0.17 0 15 0 0 15 5 10 23 5 10 81.78 44.24 55.48 0 2 3 Whitelist MELA-AU 22 0.62 0 0 0 0.59 0 Low confidence MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma With other complex events 22 0.08 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 12 23083655 28435297 3 4 142 1 0 1 1 1 0.8 0.01 8 0 0 8 7 8 19 7 10 81.78 80.03 16.05 0 2 5 Whitelist MELA-AU 0.68 0.04 0 0 0.84 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 7 0.02 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 13 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 14 54153085 54270772 1 1 142 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 81.78 99.09 0 0 0 3 Whitelist MELA-AU 0.62 0.34 NA NA 0.59 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 15 46043296 46104662 2 2 142 0 0 1 1 0 0.57 0.6 3 0 0 NA NA NA 10 4 7 81.78 99.84 0.16 0 6 5 Whitelist MELA-AU 0.68 0.82 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 16 86186241 90105121 6 6 142 1 2 1 2 0 0.88 0 10 0 0 10 4 6 19 7 7 81.78 98.75 0.87 1 2 4 Whitelist MELA-AU 0.93 0 0 0 0.91 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 12 0.04 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 17 29563184 76940801 1 10 142 2 2 0 1 5 0.53 0 14 0 0 14 3 5 15 3 5 81.78 61.36 38.62 0 4 3 Whitelist MELA-AU 12 0.68 0.01 0 0 0.64 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 15 0.05 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 18 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 19 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 20 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 21 NA NA 0 0 142 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 22 41378272 41557631 4 4 142 2 1 1 0 0 0.57 0 8 0 0 8 7 8 10 7 9 81.78 100 0 0 3 4 Whitelist MELA-AU 0.68 0 0 0 0.64 0 Linked to low confidence MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma After polyploidization 8 0.03 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0008 X 44864529 149118999 1 3 142 1 1 1 0 0 0.8 0.12 2 0 0 NA NA NA NA NA NA 81.78 0.59 99.18 0 2 4 Whitelist MELA-AU 0.87 0.31 0 0 0.84 0 No MELA-AU MELA-0008 MELA 0.79 3.81 Skin-Melanoma NA 6 0.02 NA 3 MELA-AU DO220846 MELA-0008 female deceased C43.7 surgery unknown 84 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 9.67 MELA-AU::MELA-0009 1 101493399 230402114 1 9 351 3 1 1 2 2 0.67 0.01 16 0 0 16 4 5 24 5 9 66.03 88.71 11.29 0 4 2 Whitelist MELA-AU 2 0.85 0.03 0 0 0.74 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 16 0.02 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 2 75015596 208916548 1 2 351 2 0 0 0 0 0.11 0 7 0 0 7 5 7 8 6 6 66.03 80.24 19.65 0 2 4 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 3 19250926 195326589 23 33 351 7 6 5 5 10 0.92 0 53 0 0 53 5 12 62 7 8 66.03 42.83 53.72 0 4 2 Whitelist MELA-AU 22 0.73 0 0 0 0.94 1 Low confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 56 0.08 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 4 33965478 139241167 1 3 351 1 1 0 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 66.03 99.98 0 0 4 5 Whitelist MELA-AU 0.87 0 0 0 0.84 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 6 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 5 102110923 134124489 1 2 351 0 2 0 0 0 0.11 0 4 0 0 4 3 4 6 3 3 66.03 97.23 0 0 4 3 Whitelist MELA-AU 0.54 0.01 0 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 6 31870943 69509422 28 71 351 8 8 7 5 43 0.84 0 47 0 0 47 3 5 59 5 8 66.03 37.78 59.39 15 13 4 Whitelist MELA-AU 11_20 0.98 0 0 0 0.88 1 Linked to high confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 99 0.14 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 7 1620898 51672758 4 6 351 1 1 1 1 2 1 0.03 11 0 0 11 4 4 18 4 4 66.03 96.4 1.08 0 3 4 Whitelist MELA-AU 0.93 0.12 0 0 1 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 10 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 8 37556297 42686306 1 5 351 1 0 0 2 2 0.3 0 7 0 0 7 4 6 12 4 6 66.03 95.04 1.43 0 2 3 Whitelist MELA-AU 11 0.93 0.03 0 0 0.59 1 Linked to low confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 8 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 9 17055814 130427729 1 2 351 2 0 0 0 0 0.11 0.01 5 0.01 0 5 4 5 7 4 4 66.03 77.02 22.28 0 2 4 Whitelist MELA-AU 0.54 0.05 0.01 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 10 23805540 35126611 1 2 351 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 66.03 0.29 99.54 0 0 2 Whitelist MELA-AU 0.54 0 NA 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 11 41485920 112489309 40 94 351 10 11 10 9 54 0.98 0 69 0 0 69 5 8 71 5 8 66.03 35.54 64.04 9 2 6 Whitelist MELA-AU 20 0.74 0 0 0 0.99 1 Low confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 134 0.19 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 12 4582952 131042220 1 15 351 7 4 1 1 2 0.05 1 28 0 0 28 6 8 29 6 6 66.03 38.91 57.41 0 4 2 Whitelist MELA-AU 0.54 1 0 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 28 0.04 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 13 113136039 113170013 1 1 351 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 66.03 35.59 64.41 0 2 3 Whitelist MELA-AU 0.62 0.01 NA NA 0.59 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 14 38858361 106031299 6 12 351 3 1 2 0 6 0.34 0.22 9 0 0 9 3 5 10 3 5 66.03 98.48 0.63 0 4 3 Whitelist MELA-AU 0.68 0.45 0 0 0.59 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 18 0.03 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 15 69257557 99919821 1 6 351 3 1 0 0 2 0.11 0.74 9 0 0 9 3 7 11 3 3 66.03 50.16 49.71 0 3 1 Whitelist MELA-AU 0.68 0.91 0 0 0.48 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 10 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 16 64627143 73869891 5 13 351 0 1 2 2 8 0.53 0 18 0 0 18 4 9 22 4 4 66.03 12.82 87.03 1 4 2 Whitelist MELA-AU 11_20 0.62 0.02 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 18 0.03 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 17 29065784 44305776 2 4 351 2 0 1 1 0 0.57 0.18 8 0 0 8 3 6 10 3 6 66.03 96.04 3.95 0 2 4 Whitelist MELA-AU 0.68 0.4 0 0 0.64 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 8 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 18 55164258 55473346 1 1 351 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 66.03 41.78 53.58 0 1 2 Whitelist MELA-AU 0.62 0.01 NA NA 0.59 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 19 11141821 23474257 6 14 351 3 0 2 1 8 0.34 0 11 0 0 11 3 8 16 4 7 66.03 57.76 34.61 0 2 1 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 20 0.03 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 20 50318897 61655152 5 17 351 1 3 1 0 12 0.28 0 18 0 0 18 9 14 25 9 9 66.03 99.01 0 0 6 7 Whitelist MELA-AU 11 0.87 0 0 0 0.59 1 High confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma With other complex events 22 0.03 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 21 16392620 32510436 1 9 351 2 1 0 1 5 0.57 0.01 13 0 0 13 3 8 16 3 3 66.03 28.59 49.24 1 2 4 Whitelist MELA-AU 0.68 0.05 0 0 0.64 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 13 0.02 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 22 31415162 49131333 9 17 351 3 2 3 1 8 0.75 0 7 0 0 7 7 7 13 10 10 66.03 99.76 0 1 4 5 Whitelist MELA-AU 3 0.62 0 0 0 0.83 1 High confidence MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma After polyploidization 26 0.04 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0009 X 69724090 139909454 1 3 351 2 1 0 0 0 0.3 0.01 1 0 0 NA NA NA NA NA NA 66.03 100 0 0 1 NA Whitelist MELA-AU 0.62 0.06 0 0 0.59 1 No MELA-AU MELA-0009 MELA 0.49 3.33 Skin-Melanoma NA 6 0.01 NA 2 MELA-AU DO220847 MELA-0009 male deceased C43.7 surgery unknown 71 1732 1732 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 56.97 MELA-AU::MELA-0011 1 169476555 172924544 1 2 44 0 0 0 1 1 0.39 1 1 NA NA NA NA NA 7 0 4 58.77 42.78 57.19 0 5 NA Whitelist MELA-AU 0.68 1 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 3 0.03 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 2 64149166 103324555 1 2 44 0 0 0 1 1 0.39 0.42 3 0 NA NA NA NA 18 11 12 58.77 98.65 1.22 0 4 2 Whitelist MELA-AU 0.68 0.66 0 NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 3 0.03 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 3 NA NA 0 0 44 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 11 0 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.62 NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 4 58681872 166955073 1 3 44 2 0 0 0 1 0.11 1 5 NA 0 5 3 5 10 4 4 58.77 29.92 69.86 0 2 1 Whitelist MELA-AU 0.62 1 NA 0 0.48 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 5 0.06 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 5 163489716 163650315 3 3 44 1 1 0 1 0 0.8 0 2 0 0 NA NA NA 22 4 6 58.77 93.4 6.45 0 3 5 Whitelist MELA-AU 0.87 0 0 0 0.84 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 6 116069533 116090585 1 1 44 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA 12 10 10 58.77 97.14 0.01 0 2 3 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 7 4782420 4795420 1 1 44 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 11 6 11 58.77 97.45 0 0 4 6 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 8 2801814 2833852 1 1 44 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA 10 4 6 58.77 95.95 0.52 0 4 NA Whitelist MELA-AU 0.62 0.9 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 9 11644018 22884247 3 3 44 2 1 0 0 0 0.3 0.09 8 0 0 8 8 8 11 9 9 58.77 52.88 46.97 2 0 2 Whitelist MELA-AU 0.62 0.25 0 0 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 10 65226571 93515759 4 4 44 0 0 2 2 0 0.26 0.14 4 0 0 4 0 3 4 0 0 58.77 0.87 98.95 0 2 0 Whitelist MELA-AU 0.62 0.34 0 0 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 8 0.09 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 11 2292641 2876097 1 1 44 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 58.77 45.36 54.21 0 1 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 12 19033403 19062282 1 1 44 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 58.77 0.02 99.9 0 1 2 Whitelist MELA-AU 0.62 0.9 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 13 103243471 107762225 2 2 44 1 1 0 0 0 0.57 0.06 1 0 0 NA NA NA 5 3 5 58.77 97.19 0.03 0 4 NA Whitelist MELA-AU 0.68 0.2 0 0 0.64 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 15 91337316 91349342 1 1 44 1 0 0 0 0 0.39 0.12 1 0 0 NA NA NA 8 5 8 58.77 94.83 0.3 0 4 NA Whitelist MELA-AU 0.62 0.31 0 0 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 16 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 4 6 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 18 33173810 33984175 1 1 44 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 58.77 20.73 74.63 0 2 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 19 NA NA 0 0 44 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.44 NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 21 NA NA 0 0 44 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.67 NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0011 X NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0011 MELA 0.53 3.24 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220848 MELA-0011 female alive C43.7 surgery unknown 41 1918 1918 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.09 MELA-AU::MELA-0012 1 193542767 195468958 2 4 508 1 1 0 0 2 0.57 0.51 3 0 0 NA NA NA 47 7 16 59.94 92.16 4.55 0 3 4 Whitelist MELA-AU 4 0.68 0.75 0 0 0.64 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 2 101175893 235867459 2 16 508 1 1 2 0 12 0.57 0 12 0 0 12 5 6 26 8 8 59.94 57.92 41.98 0 3 2 Whitelist MELA-AU 4 0.87 0.02 0 0 0.64 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 20 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 3 131435629 180741702 7 11 508 0 1 3 3 4 0.28 0.86 24 0 0 24 5 15 40 5 16 59.94 35.82 64.14 0 4 2 Whitelist MELA-AU 0.74 0.99 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 18 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 4 3941537 189772013 1 28 508 1 5 3 1 18 0.22 0.42 26 0 0 26 12 13 26 12 13 59.94 37.88 61.69 1 3 4 Whitelist MELA-AU 2_9_X 0.81 0.67 0 0 0.59 1 Linked to low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 38 0.04 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 5 82723683 86477835 5 5 508 1 2 2 0 0 0.53 0.58 1 0 0 NA NA NA 20 4 8 59.94 99.6 0.28 0 5 NA Whitelist MELA-AU 0.68 0.81 0 0 0.64 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 10 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 6 32272825 91026453 1 14 508 2 2 2 1 7 0.93 0.02 14 0 0 14 6 14 17 6 14 59.94 35.05 61.61 5 2 4 Whitelist MELA-AU 11 0.81 0.08 0 0 0.95 1 Linked to low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 21 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 7 32236661 117391259 70 96 508 18 15 16 21 26 0.75 0 97 0 0 97 7 15 119 7 15 59.94 64.81 34.53 10 2 4 Whitelist MELA-AU 3_9 0.93 0 0 0 0.83 1 High confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 166 0.16 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 8 508734 74087761 1 13 508 0 1 1 3 8 0.28 0.13 14 0 0 14 7 9 23 12 15 59.94 91.5 4.69 0 4 5 Whitelist MELA-AU 13_6 0.62 0.32 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 18 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 9 4860008 31734961 27 32 508 11 5 5 6 5 0.3 0 34 0 0 34 6 21 62 6 21 59.94 55.74 41.65 0 2 0 Whitelist MELA-AU 7 0.62 0 0 0 0.59 1 Low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 59 0.06 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 10 34937946 111551297 8 11 508 3 3 1 1 3 0.57 0.29 21 0 0 21 5 11 25 5 11 59.94 62.05 37.77 6 2 3 Whitelist MELA-AU 0.62 0.53 0 0 0.64 1 Low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 19 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 11 60665556 76908360 47 80 508 12 10 14 11 33 0.86 0 96 0 0 96 5 9 105 5 9 59.94 60.07 39.5 22 4 8 Whitelist MELA-AU 12_3_6_9 0.98 0 0 0 0.9 1 Low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 127 0.12 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 12 62098962 89622897 12 15 508 3 4 2 3 3 0.88 0.83 28 0 0 28 13 18 47 13 13 59.94 58.32 37.81 11 2 3 Whitelist MELA-AU 11 0.99 0.97 0 0 0.91 1 High confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 27 0.03 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 13 22438944 77491950 8 14 508 1 2 3 2 6 0.8 0.54 10 0 0 10 10 10 17 17 17 59.94 21.69 78.31 0 2 3 Whitelist MELA-AU 8 0.81 0.77 0 0 0.84 1 High confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma Canonical without polyploidization 22 0.02 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 14 58571536 94190575 1 5 508 0 0 1 1 3 0.57 0.04 3 0 0 NA NA NA 7 5 5 59.94 100 0 0 3 1 Whitelist MELA-AU 0.93 0.14 0 0 0.64 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 7 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 15 93155247 93217025 1 1 508 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 11 3 5 59.94 21.42 78.58 0 2 4 Whitelist MELA-AU 0.62 0.01 NA NA 0.59 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 2 0 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 16 NA NA 0 0 508 0 0 0 0 0 NA 0 NA NA NA NA NA NA 8 5 6 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 0 0 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 17 18478918 18885609 2 4 508 1 1 0 0 2 0.57 0 4 0 0 4 0 3 44 8 8 59.94 64.13 31.39 0 0 1 Whitelist MELA-AU 11 0.62 0 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 6 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 18 3576671 61867828 1 6 508 2 2 0 0 2 0.26 0.04 13 0 0 13 3 6 15 5 6 59.94 78.4 16.96 0 4 2 Whitelist MELA-AU 0.93 0.13 0 0 0.59 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 10 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 19 5077733 39839490 1 3 508 2 0 0 1 0 0.3 0.15 9 0 0 9 3 5 14 3 5 59.94 67.32 25.49 0 2 3 Whitelist MELA-AU 0.62 0.35 0 0 0.59 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 20 NA NA 0 0 508 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 19 6 8 0 0 0 0 0 0 Whitelist MELA-AU NA 0.04 NA NA NA 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 0 0 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 21 14379235 41832313 1 5 508 2 0 0 0 3 0.11 1 6 0 0 6 3 4 7 3 4 59.94 76.6 1.12 0 3 1 Whitelist MELA-AU 11 0.62 1 0 0 0.48 1 Linked to low confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 7 0.01 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 22 NA NA 0 0 508 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.77 NA NA NA 1 No MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma NA 0 0 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0012 X 22327741 154060135 16 22 508 5 4 3 4 6 0.92 1 34 0 0 34 11 34 35 11 11 59.94 79.41 17.38 5 3 2 Whitelist MELA-AU 0.99 1 0 0 0.94 1 High confidence MELA-AU MELA-0012 MELA 0.79 2.87 Skin-Melanoma With other complex events 38 0.04 NA 5 MELA-AU DO220849 MELA-0012 female deceased C43.7 surgery unknown 78 323 323 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.62 MELA-AU::MELA-0015 1 22120736 247137790 1 15 201 3 3 1 1 7 0.57 0.69 16 0 0 16 5 9 17 5 9 77.6 96.41 3.59 0 5 6 Whitelist MELA-AU 0.99 0.89 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 23 0.06 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 2 12998893 180541994 1 12 201 1 8 1 0 2 0 0.7 18 0 0 18 11 16 23 11 17 77.6 97.04 0 14 4 5 Whitelist MELA-AU 0.07 0.9 0 0 0.05 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 22 0.05 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 3 7634723 145257023 1 10 201 2 3 0 1 4 0.34 0.49 11 0 0 11 3 7 11 3 7 77.6 99.76 0.12 0 3 2 Whitelist MELA-AU 2 0.86 0.73 0 0 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 16 0.04 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 4 30480853 180395475 2 3 201 0 0 1 1 1 0.57 0.57 16 0 0 16 16 16 22 18 22 77.6 92.89 7.11 0 3 4 Whitelist MELA-AU 0.87 0.8 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 5 0.01 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 5 142049046 142069581 2 2 201 0 0 1 1 0 0.57 1 4 0 0 4 4 4 19 5 5 77.6 99.82 0.04 0 2 3 Whitelist MELA-AU 0.68 1 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 6 83463674 98367942 4 8 201 1 0 2 1 4 0.57 0.02 4 0 0 4 4 4 16 9 14 77.6 43.48 53.69 0 2 3 Whitelist MELA-AU 0.62 0.07 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 12 0.03 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 7 5405058 100047771 1 11 201 0 2 0 0 9 0.11 0.44 8 0 0 8 4 5 13 4 4 77.6 96.94 0 0 5 4 Whitelist MELA-AU 1 0.68 0.68 0 0 0.48 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 13 0.03 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 8 124286530 124319560 1 1 201 0 1 0 0 0 0.39 0.11 1 0 NA NA NA NA 5 5 5 77.6 100 0 0 3 NA Whitelist MELA-AU 0.62 0.28 0 NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 9 130340699 140132917 1 15 201 0 5 0 0 10 0 0.01 10 0 0 10 4 6 13 4 4 77.6 99.66 0.13 0 3 4 Whitelist MELA-AU 14 0.62 0.04 0 0 0.07 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 20 0.05 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 10 30751509 100432319 2 7 201 0 1 2 1 3 0.57 0.01 12 0 0 12 3 7 21 5 7 77.6 76.5 23.31 2 3 2 Whitelist MELA-AU 0.62 0.03 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 11 0.03 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 11 65311263 80765398 2 5 201 0 1 1 0 3 0.57 0.06 8 0 0 8 3 4 16 3 3 77.6 38.55 61.02 0 2 4 Whitelist MELA-AU 0.68 0.2 0 0 0.64 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 7 0.02 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 12 110399624 110669367 7 7 201 0 4 1 2 0 0.17 0 5 0 0 5 3 5 17 4 5 77.6 94.84 0.83 0 3 4 Whitelist MELA-AU 0.62 0 0 0 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 14 0.03 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 13 78344731 78395586 1 1 201 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 5 3 3 77.6 100 0 0 5 7 Whitelist MELA-AU 0.62 0.39 NA NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 14 56546654 102549592 1 7 201 0 3 0 0 4 0.03 0.31 5 0 0 5 5 5 7 5 7 77.6 99.09 0 0 3 4 Whitelist MELA-AU 5 0.68 0.55 0 0 0.33 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 10 0.02 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 15 41817263 41850024 1 1 201 0 1 0 0 0 0.39 0.83 1 0 NA NA NA NA NA NA NA 77.6 47.86 52.01 0 2 NA Whitelist MELA-AU 0.62 0.97 0 NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 16 57509089 84708915 1 5 201 0 5 0 0 0 0 0.02 7 0 0 7 7 7 9 7 9 77.6 99.9 0 0 3 4 Whitelist MELA-AU 0.1 0.1 0 0 0.07 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 10 0.02 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 17 10186086 78303280 3 8 201 1 1 0 1 5 0.8 0 18 0 0 18 6 6 23 6 8 77.6 68.71 26.84 0 3 4 Whitelist MELA-AU 0.62 0 0 0 0.84 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 11 0.03 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 18 24267973 24311107 1 1 201 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 77.6 0.06 99.91 0 2 3 Whitelist MELA-AU 0.62 0.63 NA NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 19 29765034 58719123 15 17 201 2 4 4 5 2 0.74 0 31 0 0 31 4 5 37 4 11 77.6 66.68 25.35 0 5 8 Whitelist MELA-AU 0.68 0 0 0 0.82 0 Low confidence MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma With other complex events 32 0.08 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 20 47921718 62694740 1 3 201 0 3 0 0 0 0.03 0.63 5 0 0 5 4 5 6 5 6 77.6 99.42 0 0 3 4 Whitelist MELA-AU 0.41 0.84 0 0 0.33 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 6 0.01 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 21 45185445 45207955 1 1 201 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA 6 3 3 77.6 70.29 0 0 5 6 Whitelist MELA-AU 0.62 0.57 NA NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 22 41570451 41966574 1 2 201 0 2 0 0 0 0.11 1 3 NA 0 NA NA NA 5 3 3 77.6 100 0 0 4 5 Whitelist MELA-AU 0.54 1 NA 0 0.48 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0015 X 126118547 126290818 1 1 201 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 77.6 0.12 99.88 0 1 2 Whitelist MELA-AU 0.62 0.02 NA NA 0.59 0 No MELA-AU MELA-0015 MELA 0.55 3.39 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220850 MELA-0015 male alive C43.7 surgery unknown 75 4219 4219 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 138.78 MELA-AU::MELA-0022 1 77229462 77244577 1 1 63 0 1 0 0 0 0.39 0.64 2 0 NA NA NA NA 7 6 6 32.47 50.47 49.53 0 2 3 Whitelist MELA-AU 0.62 0.85 0 NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 2 1039925 1858993 1 1 63 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 5 3 5 32.47 6.03 91.28 0 1 2 Whitelist MELA-AU 0.62 0.39 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 3 11014000 11360656 3 3 63 1 0 1 1 0 0.8 0.01 1 0 0 NA NA NA NA NA NA 32.47 0.33 99.55 18 2 NA Whitelist MELA-AU 0.87 0.05 0 0 0.84 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 6 0.05 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 4 2531155 182454909 1 9 63 3 0 0 0 6 0.03 0 5 0 0 5 5 5 5 5 5 32.47 0.11 99.87 400 2 1 Whitelist MELA-AU 0.62 0.02 0 0 0.33 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 12 0.1 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 5 92801402 151842814 1 2 63 2 0 0 0 0 0.11 0.12 3 0 0 NA NA NA NA NA NA 32.47 0.25 99.61 164 2 1 Whitelist MELA-AU 0.54 0.3 0 0 0.48 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 4 0.03 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 6 NA NA 0 0 63 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 7 78154332 78291884 1 1 63 1 0 0 0 0 0.39 0.58 1 0 NA NA NA NA NA NA NA 32.47 99.78 0 113 3 NA Whitelist MELA-AU 0.62 0.8 0 NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 8 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 9 21622950 22332993 1 1 63 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 32.47 97.82 1.48 0 0 1 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 10 NA NA 0 0 63 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.21 0 NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 11 2704795 90359987 2 6 63 0 0 1 1 4 0.57 0.01 3 0 0 NA NA NA 7 4 4 32.47 27.11 72.47 150 1 2 Whitelist MELA-AU 0.93 0.04 0 0 0.64 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 8 0.06 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 12 38318544 38333590 1 1 63 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.47 0 99.92 37 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 13 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 14 32538355 32567716 2 2 63 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA 4 4 4 32.47 91.65 4.64 0 1 NA Whitelist MELA-AU 0.68 0.16 0 0 0.64 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 4 0.03 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 15 34896475 39047406 1 1 63 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 32.47 4.05 95.95 0 1 2 Whitelist MELA-AU 0.62 0.5 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 16 9250862 9776252 1 1 63 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.47 0.58 99.32 7 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 17 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 18 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 19 1254025 43449409 1 2 63 1 1 0 0 0 0.57 0.35 2 NA 0.04 NA NA NA NA NA NA 32.47 0.07 99.74 70 2 3 Whitelist MELA-AU 0.68 0.61 NA 0.04 0.64 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 4 0.03 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 20 15005952 26300978 1 2 63 1 1 0 0 0 0.57 0.15 2 0 0 NA NA NA NA NA NA 32.47 98.97 0.07 56 2 3 Whitelist MELA-AU 0.68 0.36 0 0 0.64 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 4 0.03 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 21 NA NA 0 0 63 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.77 NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 22 46754536 47155806 1 1 63 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 32.47 100 0 0 3 4 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0022 X NA NA 0 0 63 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.63 NA NA NA 0 No MELA-AU MELA-0022 MELA 0.65 1.92 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220851 MELA-0022 male alive C43.2 surgery unknown 83 1160 1160 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.16 MELA-AU::MELA-0034 1 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 2 NA NA 0 0 26 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 3 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 4 153054850 154606343 1 1 26 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA NA NA NA 18.53 0.81 99.01 28 1 2 Whitelist MELA-AU 0.62 0.49 0 NA 0.59 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 5 169036850 169455613 1 2 26 0 0 1 1 0 0.57 0.22 1 NA 0 NA NA NA NA NA NA 18.53 0 99.85 19 2 NA Whitelist MELA-AU 0.68 0.45 NA 0 0.64 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 4 0.08 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 6 NA NA 0 0 26 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.43 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 7 76014580 135844137 1 3 26 2 0 0 0 1 0.11 0.05 3 0 0 NA NA NA NA NA NA 18.53 29.5 70.28 4 2 1 Whitelist MELA-AU 0.62 0.16 0 0 0.48 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 5 0.1 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 9 NA NA 0 0 26 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.51 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 10 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 11 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 12 78344030 96133317 1 3 26 1 0 1 1 0 0.8 0.12 2 0 0 NA NA NA NA NA NA 18.53 13.29 86.63 4 1 2 Whitelist MELA-AU 0.87 0.31 0 0 0.84 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 6 0.12 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 14 NA NA 0 0 26 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.42 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 15 54940324 98541921 1 2 26 0 0 0 1 1 0.39 0.16 1 NA NA NA NA NA NA NA NA 18.53 0 100 9 2 NA Whitelist MELA-AU 0.68 0.37 NA NA 0.59 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 3 0.06 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 16 68828446 69177434 1 1 26 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 18.53 0.39 99.5 5 1 2 Whitelist MELA-AU 0.62 0.36 NA NA 0.59 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 19 40803937 40851525 1 1 26 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 18.53 0.08 99.75 1 2 4 Whitelist MELA-AU 0.62 0.65 NA NA 0.59 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 22 NA NA 0 0 26 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.51 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0034 X NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0034 MELA 0.52 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220852 MELA-0034 male deceased C43.5 surgery unknown 63 3049 3049 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 100.3 MELA-AU::MELA-0037 1 5943783 247256607 2 4 49 0 0 2 2 0 0.26 0.01 12 0 0 12 12 12 13 13 13 35.63 0.37 99.63 2 1 2 Whitelist MELA-AU 0.62 0.06 0 0 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 8 0.08 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 2 227710305 240027538 1 4 49 2 0 0 1 1 0.3 0.6 2 0 0 NA NA NA NA NA NA 35.63 4.44 95.45 1 1 2 Whitelist MELA-AU 0.68 0.82 0 0 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 7 0.07 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 3 112248395 172871837 1 4 49 2 1 1 0 0 0.57 0.08 4 0 0 4 3 4 5 3 3 35.63 3.92 96.05 17 2 1 Whitelist MELA-AU 0.68 0.23 0 0 0.64 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 8 0.08 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 4 33788084 35823355 2 2 49 0 0 1 1 0 0.57 0.57 1 0.01 0 NA NA NA NA NA NA 35.63 0.06 99.74 5 2 NA Whitelist MELA-AU 0.68 0.79 0.01 0 0.64 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 4 0.04 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 5 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 6 159925513 160128832 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 4 35.63 99.86 0 2 1 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 7 77007913 77126571 1 1 49 0 1 0 0 0 0.39 0.34 1 0 NA NA NA NA NA NA NA 35.63 99.78 0 4 3 NA Whitelist MELA-AU 0.62 0.59 0 NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 8 78528172 78573453 1 1 49 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 35.63 29.45 67.14 1 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 9 77293286 93312304 2 2 49 0 0 1 1 0 0.57 0.72 1 NA 0 NA NA NA NA NA NA 35.63 0 99.3 1 2 NA Whitelist MELA-AU 0.68 0.9 NA 0 0.64 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 4 0.04 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 10 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 11 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 12 119344330 119382999 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 5 5 5 35.63 56.6 39.66 0 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 13 58124647 112725048 1 5 49 1 0 0 2 2 0.3 0 6 0 0 6 6 6 8 6 6 35.63 98.92 1.08 5 3 4 Whitelist MELA-AU 0.93 0.01 0 0 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 8 0.08 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 14 93868349 93915322 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.63 96.29 0 0 1 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 15 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 16 25066607 25137799 1 1 49 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.63 0 99.9 0 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 17 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 18 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 19 36869391 37270704 1 1 49 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 35.63 0.68 99.15 0 1 2 Whitelist MELA-AU 0.62 0.84 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 20 13213748 14042259 1 1 49 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 35.63 92.98 0 1 3 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 2 0.02 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 21 NA NA 0 0 49 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.7 NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 22 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0037 X NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0037 MELA 0.68 1.87 Skin-Melanoma NA 0 0 NA 1 MELA-AU DO220853 MELA-0037 male deceased C43.7 surgery unknown 77 7000 7000 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 230.26 MELA-AU::MELA-0043 1 3390976 55230373 3 10 106 2 0 1 0 7 0.3 0.1 3 0.03 0 NA NA NA NA NA NA 77.01 100 0 2 3 4 Whitelist MELA-AU 0.62 0.27 0.03 0 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 13 0.06 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 2 41909008 54440573 1 2 106 0 2 0 0 0 0.11 0.11 4 0 0 4 4 4 5 5 5 77.01 99.9 0 2 4 6 Whitelist MELA-AU 0.54 0.29 0 0 0.48 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 3 116315278 116461474 1 1 106 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 77.01 96.92 0 2 1 3 Whitelist MELA-AU 0.62 0.03 NA NA 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 4 171432121 173729415 1 1 106 0 0 0 1 0 0.39 0.85 1 0 NA NA NA NA 5 4 4 77.01 88.42 9.01 7 3 NA Whitelist MELA-AU 0.62 0.98 0 NA 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 5 24251964 130982453 1 5 106 2 1 0 0 2 0.3 1 8 0 0 8 5 8 9 5 5 77.01 97.29 0.03 34 4 2 Whitelist MELA-AU 0.68 1 0 0 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 8 0.04 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 6 146452116 170788391 11 12 106 3 3 2 3 1 0.97 0.01 14 0 0 14 14 14 16 15 15 77.01 99.85 0 3 1 3 Whitelist MELA-AU 0.93 0.03 0 0 0.98 1 High confidence MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma Canonical without polyploidization 23 0.11 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 7 5229877 53502420 23 23 106 6 5 6 6 0 0.99 0 16 0 0 16 7 10 17 7 7 77.01 97.33 2.45 8 4 6 Whitelist MELA-AU 1 0 0 0 1 1 High confidence MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma With other complex events 46 0.22 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 8 2629743 115350819 1 5 106 1 1 0 0 3 0.57 1 8 0.01 0 8 4 6 9 4 7 77.01 96.58 0 31 3 5 Whitelist MELA-AU 0.62 1 0.01 0 0.64 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 7 0.03 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 9 NA NA 0 0 106 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.95 NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 10 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 11 80259264 81234143 1 2 106 2 0 0 0 0 0.11 0.25 3 NA 0 NA NA NA 5 0 4 77.01 58.33 37.6 0 1 4 Whitelist MELA-AU 0.54 0.49 NA 0 0.48 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 12 15418895 109367620 1 2 106 0 2 0 0 0 0.11 0.25 5 NA 0 5 3 4 6 3 4 77.01 59.63 40.29 9 2 3 Whitelist MELA-AU 0.54 0.49 NA 0 0.48 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 13 40006742 97470261 1 4 106 2 0 0 0 2 0.11 0.79 4 0 0 4 4 4 5 5 5 77.01 99.58 0.42 12 2 4 Whitelist MELA-AU 6 0.54 0.94 0 0 0.48 1 Linked to high confidence MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma Before polyploidization 6 0.03 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 14 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 15 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 16 78963663 79071327 1 1 106 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 77.01 99.89 0 0 4 6 Whitelist MELA-AU 0.62 0.77 NA NA 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 17 NA NA 0 0 106 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 18 519368 532390 1 1 106 0 1 0 0 0 0.39 0.37 2 0.01 NA NA NA NA NA NA NA 77.01 99.96 0 0 4 6 Whitelist MELA-AU 0.62 0.62 0.01 NA 0.59 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 19 NA NA 0 0 106 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 20 924675 9380462 11 12 106 3 4 1 3 1 0.63 0 22 0 0 22 4 7 30 4 5 77.01 72.08 20.84 7 4 6 Whitelist MELA-AU 0.68 0 0 0 0.71 1 Low confidence MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma With other complex events 23 0.11 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 21 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 22 18806121 45493976 1 2 106 1 1 0 0 0 0.57 0.36 4 NA 0 4 3 4 5 3 5 77.01 100 0 0 3 4 Whitelist MELA-AU 0.68 0.61 NA 0 0.64 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0043 X 31911356 32756829 1 2 106 1 1 0 0 0 0.57 0.82 4 0 0 4 3 4 6 3 4 77.01 2.01 97.99 0 2 0 Whitelist MELA-AU 0.68 0.96 0 0 0.64 1 No MELA-AU MELA-0043 MELA 0.63 3.54 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220855 MELA-0043 male deceased C43.7 surgery unknown 47 4343 4343 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 142.86 MELA-AU::MELA-0046 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 2 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 3 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 4 35699844 185755377 1 3 17 2 0 0 1 0 0.3 0.02 4 0 0 4 4 4 5 5 5 32.34 4.64 95.34 249 1 2 Whitelist MELA-AU 0.62 0.09 0 0 0.59 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 6 0.18 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 5 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 6 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 8 NA NA 0 0 17 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 12 NA NA 0 0 17 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.78 NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 16 7715787 17628917 1 1 17 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 32.34 48.59 51.3 18 2 NA Whitelist MELA-AU 0.62 0.62 NA NA 0.59 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 2 0.06 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 20 48296108 48377385 1 1 17 0 1 0 0 0 0.39 0.05 2 NA 0 NA NA NA NA NA NA 32.34 0.13 98.9 12 2 3 Whitelist MELA-AU 0.62 0.17 NA 0 0.59 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 2 0.06 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0046 X 14285484 138238767 1 3 17 3 0 0 0 0 0.03 0 3 0 0 NA NA NA NA NA NA 32.34 0.13 99.65 180 2 1 Whitelist MELA-AU 0.41 0 0 0 0.33 0 No MELA-AU MELA-0046 MELA 0.45 1.72 Skin-Melanoma NA 6 0.18 nonsynonymous_SNV,17_7577099_T_C,CN:1 1 MELA-AU DO220857 MELA-0046 female alive C43.7 surgery unknown 38 3479 3479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 114.44 MELA-AU::MELA-0048 1 72041048 72224853 1 1 444 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 71.65 56.4 43.6 0 2 NA Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 2 35447197 238700317 1 8 444 1 1 0 2 4 0.57 0 10 0 0 10 5 10 16 8 8 71.65 96.9 0 0 4 3 Whitelist MELA-AU 0.62 0 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma With other complex events 12 0.01 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 3 77580826 77670434 1 1 444 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 3 71.65 99.92 0.05 0 2 3 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 4 6102625 46953792 26 72 444 10 4 8 4 46 0.25 0 63 0 0 63 4 5 75 8 8 71.65 78.84 21.14 1 2 3 Whitelist MELA-AU 5_7 0.8 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma With other complex events 98 0.11 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 5 1054293 127185143 32 163 444 11 6 7 8 131 0.63 0 161 0 0 161 6 7 179 9 9 71.65 30.83 66.5 14 2 3 Whitelist MELA-AU 2_7 0.69 0 0 0 0.7 1 Low confidence MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma With other complex events 195 0.22 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 6 NA NA 0 0 444 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 7 858862 151538983 121 279 444 34 25 29 33 158 0.64 0 316 0 0 316 8 8 318 8 8 71.65 92.41 4.45 17 3 4 Whitelist MELA-AU 1 0 0 0 0.72 1 High confidence MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma With other complex events 400 0.45 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 8 77135002 77278419 1 1 444 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 7 7 7 71.65 99.89 0.11 0 2 3 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 9 17705818 106669394 1 5 444 4 0 1 0 0 0.04 0 8 0 0 8 8 8 9 9 9 71.65 1.31 98.51 0 1 2 Whitelist MELA-AU 0.45 0.02 0 0 0.36 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 10 0.01 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 10 NA NA 0 0 444 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 11 NA NA 0 0 444 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 12 77492555 77725876 1 1 444 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 71.65 99.92 0 0 3 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 13 55367837 56419149 2 2 444 0 0 1 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 71.65 99.09 0.91 0 2 3 Whitelist MELA-AU 0.68 0.01 0 0 0.64 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 4 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 14 NA NA 0 0 444 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 15 NA NA 0 0 444 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 16 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 17 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 18 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 19 37535364 37554074 1 1 444 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 71.65 0.03 99.8 0 1 2 Whitelist MELA-AU 0.62 0.06 NA NA 0.59 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 20 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 21 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 22 NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0048 X NA NA 0 0 444 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0048 MELA 0.9 2.98 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220858 MELA-0048 male deceased C43.7 surgery complete response 51 590 590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.41 MELA-AU::MELA-0050 1 42522902 190461196 1 4 94 1 3 0 0 0 0.11 0.45 11 0 0 11 4 11 11 4 4 57.61 48.55 48.47 5 3 4 Whitelist MELA-AU 0.54 0.69 0 0 0.48 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 8 0.04 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 2 NA NA 0 0 94 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.09 NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 3 18921026 19053850 1 1 94 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 4 4 57.61 99.87 0 0 3 4 Whitelist MELA-AU 0.62 0.2 NA NA 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 4 30527969 177405868 1 7 94 3 2 0 1 1 0.34 0.41 11 0 0 11 5 7 12 6 7 57.61 0.51 99.25 28 2 3 Whitelist MELA-AU 0.77 0.66 0 0 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 13 0.07 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 5 28221838 141918483 1 4 94 2 2 0 0 0 0.26 0.83 5 0 0 5 3 5 5 3 3 57.61 99.79 0.07 11 3 2 Whitelist MELA-AU 0.62 0.97 0 0 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 8 0.04 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 6 101057888 116792233 1 3 94 1 0 1 1 0 0.8 1 3 0 0 NA NA NA 8 5 5 57.61 40.51 59.36 1 2 1 Whitelist MELA-AU 0.87 1 0 0 0.84 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 6 0.03 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 7 77672906 126357325 1 2 94 2 0 0 0 0 0.11 0.49 3 0 0 NA NA NA 5 3 3 57.61 97.32 0.03 3 3 2 Whitelist MELA-AU 0.54 0.74 0 0 0.48 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 8 82915398 138636856 1 3 94 3 0 0 0 0 0.03 0.63 4 0 0 4 4 4 6 5 6 57.61 0.27 96.31 7 1 2 Whitelist MELA-AU 0.41 0.85 0 0 0.33 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 6 0.03 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 9 21599146 126008720 1 3 94 3 0 0 0 0 0.03 0.79 5 0.24 0 5 4 5 6 5 5 57.61 96.92 0 4 0 1 Whitelist MELA-AU 0.41 0.94 0.24 0 0.33 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 6 0.03 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 10 53059779 82428820 1 2 94 1 1 0 0 0 0.57 0.33 4 NA 0 4 3 4 5 3 3 57.61 0.07 99.75 4 2 1 Whitelist MELA-AU 0.68 0.58 NA 0 0.64 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 11 51487991 83958719 26 28 94 11 9 4 2 2 0.04 0 52 0 0 52 6 6 55 6 6 57.61 71.82 24.63 10 15 2 Whitelist MELA-AU 0.33 0 0 0 0.43 0 Low confidence MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma With other complex events 54 0.29 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 12 13526226 13538887 1 1 94 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 5 5 5 57.61 99.92 0 0 1 4 Whitelist MELA-AU 0.62 0.95 NA NA 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 13 63607096 63648881 2 2 94 0 0 1 1 0 0.57 0.77 1 NA 0 NA NA NA NA NA NA 57.61 100 0 0 3 NA Whitelist MELA-AU 0.68 0.93 NA 0 0.64 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 14 68665798 68805097 1 1 94 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 57.61 0.13 98.96 0 1 2 Whitelist MELA-AU 0.62 0.63 NA NA 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 15 NA NA 0 0 94 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 16 NA NA 0 0 94 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 17 26999300 65151491 1 8 94 1 3 2 1 1 0.67 0 9 0 0 9 7 9 10 8 8 57.61 44.29 55.05 10 3 2 Whitelist MELA-AU 0.87 0 0 0 0.74 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 15 0.08 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 18 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 19 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 20 39527168 54236276 1 2 94 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 57.61 99.03 0 2 4 3 Whitelist MELA-AU 0.68 1 NA 0 0.64 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 22 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0050 X 14214453 151310973 1 5 94 3 2 0 0 0 0.14 0.81 9 0 0 9 5 9 10 5 5 57.61 87.11 12.66 13 3 2 Whitelist MELA-AU 0.62 0.96 0 0 0.59 0 No MELA-AU MELA-0050 MELA 0.82 2.77 Skin-Melanoma NA 10 0.05 NA 4 MELA-AU DO220859 MELA-0050 female deceased C43.7 surgery unknown 61 4753 4753 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 156.35 MELA-AU::MELA-0051 1 NA NA 0 0 21 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.88 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 2 NA NA 0 0 21 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.66 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 4 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 6 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 7 NA NA 0 0 21 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.56 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 8 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 9 NA NA 0 0 21 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.79 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 10 NA NA 0 0 21 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.49 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 12 51928458 51950042 1 1 21 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 11.31 0 99.92 0 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 2 0.05 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 13 75989271 76455728 1 1 21 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 11.31 0 100 0 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 2 0.05 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 15 NA NA 0 0 21 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.08 NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 20 30353975 61609745 2 4 21 1 0 1 0 2 0.57 0 8 0 0 8 6 7 10 6 7 11.31 70.19 22.72 17 3 4 Whitelist MELA-AU 0.68 0 0 0 0.64 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 6 0.14 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0051 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0051 MELA 0.5 1.95 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220860 MELA-0051 male alive C43.5 surgery unknown 49 5501 5501 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 180.95 MELA-AU::MELA-0052 1 168896619 180905187 4 4 91 1 1 2 0 0 0.57 1 7 0 0 7 3 4 11 4 7 72.76 100 0 3 5 3 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 8 0.04 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 2 167831472 169308648 1 1 91 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 72.76 99.3 0.61 1 2 3 Whitelist MELA-AU 0.62 0.03 NA NA 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 3 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 4 161212794 182553982 1 4 91 4 0 0 0 0 0.01 0.83 9 0 0 9 5 7 14 5 7 72.76 97.32 0.3 3 1 0 Whitelist MELA-AU 0.21 0.97 0 0 0.16 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 8 0.04 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 5 101211676 101402824 1 1 91 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 72.76 99.76 0.11 1 2 3 Whitelist MELA-AU 0.62 0.16 NA NA 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 6 NA NA 0 0 91 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.4 NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 7 46548851 78063176 1 4 91 3 1 0 0 0 0.11 1 7 0 0 7 5 7 7 5 5 72.76 99.78 0 4 4 3 Whitelist MELA-AU 0.54 1 0 0 0.48 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 8 0.04 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 8 NA NA 0 0 91 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.84 NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 9 20375336 22167239 2 2 91 1 0 1 0 0 0.57 1 4 0 0 4 3 4 9 4 4 72.76 1.74 97.55 0 1 0 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 10 97460832 120196877 1 2 91 0 0 0 1 1 0.39 0.45 3 NA NA NA NA NA 4 4 4 72.76 13.63 86.21 2 3 2 Whitelist MELA-AU 0.68 0.69 NA NA 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 3 0.02 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 11 59180890 101076970 40 40 91 11 9 12 8 0 0.8 0 29 0 0 29 7 9 32 7 12 72.76 49.38 50.2 8 2 3 Whitelist MELA-AU 0.87 0 0 0 0.84 1 High confidence MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma With other complex events 80 0.44 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 12 45000898 87243363 1 2 91 2 0 0 0 0 0.11 0.8 7 0 0 7 3 7 8 4 8 72.76 29.24 67.08 9 2 3 Whitelist MELA-AU 0.54 0.95 0 0 0.48 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 13 95102366 95121922 1 1 91 0 0 1 0 0 0.39 1 2 0 NA NA NA NA 5 3 3 72.76 85.85 0 3 5 7 Whitelist MELA-AU 0.62 1 0 NA 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 14 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 15 NA NA 0 0 91 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 16 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 17 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 18 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 19 NA NA 0 0 91 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 20 8260210 11346481 2 2 91 0 0 1 1 0 0.57 0.13 1 0.02 0 NA NA NA NA NA NA 72.76 99.01 0 1 4 NA Whitelist MELA-AU 0.68 0.33 0.02 0 0.64 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 21 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 22 20733492 37915291 3 3 91 0 0 2 1 0 0.3 0 11 0 0 11 5 11 12 5 5 72.76 39.92 36.3 0 3 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 6 0.03 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0052 X 23067924 125029193 1 1 91 0 0 1 0 0 0.39 0.33 2 NA 0 NA NA NA NA NA NA 72.76 77.02 22.75 3 2 4 Whitelist MELA-AU 0.62 0.58 NA 0 0.59 1 No MELA-AU MELA-0052 MELA 0.66 3.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220861 MELA-0052 female deceased C43.7 surgery unknown 85 313 313 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.3 MELA-AU::MELA-0053 1 112983344 205216079 1 3 57 0 3 0 0 0 0.03 0.8 4 0 0 4 4 4 7 7 7 14.98 1.85 94.79 15 2 3 Whitelist MELA-AU 0.41 0.95 0 0 0.33 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 6 0.05 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 2 50768782 51257225 3 3 57 3 0 0 0 0 0.03 0.05 3 0 0 NA NA NA 6 5 5 14.98 0.36 96.67 0 2 1 Whitelist MELA-AU 0.41 0.17 0 0 0.33 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 6 0.05 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 3 98516013 130607695 1 2 57 2 0 0 0 0 0.11 0.8 1 0 0 NA NA NA NA NA NA 14.98 0 99.86 11 2 NA Whitelist MELA-AU 0.54 0.95 0 0 0.48 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 4 93627710 93957573 1 2 57 2 0 0 0 0 0.11 1 3 0 0 NA NA NA NA NA NA 14.98 0.16 99.62 4 2 0 Whitelist MELA-AU 0.54 1 0 0 0.48 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 5 79472693 79482885 1 1 57 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 14.98 25.47 71.85 6 2 NA Whitelist MELA-AU 0.62 0.81 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 6 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 7 111008481 111038200 2 2 57 0 0 1 1 0 0.57 0.55 1 0 0 NA NA NA NA NA NA 14.98 0.03 99.74 4 2 NA Whitelist MELA-AU 0.68 0.78 0 0 0.64 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 8 130901291 131304035 1 1 57 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.98 0 99.99 7 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 9 28055526 28281276 1 1 57 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 14.98 15.72 83.58 0 2 NA Whitelist MELA-AU 0.62 0.73 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 10 29824970 29842900 1 1 57 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 4 4 14.98 10.39 89.43 3 1 2 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 11 765648 55772750 1 2 57 1 0 1 0 0 0.57 0.34 3 0 0 NA NA NA NA NA NA 14.98 85.53 14.04 9 1 2 Whitelist MELA-AU 0.68 0.59 0 0 0.64 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 12 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 13 54046273 54058313 2 2 57 0 0 1 1 0 0.57 0.13 1 0 0 NA NA NA NA NA NA 14.98 0 85.85 0 2 NA Whitelist MELA-AU 0.68 0.33 0 0 0.64 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 14 45677049 106393218 1 2 57 0 1 1 0 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 14.98 0.06 81.26 0 2 NA Whitelist MELA-AU 0.68 0.12 0 0 0.64 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 16 15122129 15148737 1 1 57 0 1 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 14.98 0 99.9 1 2 NA Whitelist MELA-AU 0.62 0.87 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 17 70577663 78191070 1 2 57 0 2 0 0 0 0.11 0.67 2 NA 0 NA NA NA NA NA NA 14.98 0.19 99.81 0 2 3 Whitelist MELA-AU 0.54 0.87 NA 0 0.48 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 18 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 19 39060234 39072385 1 1 57 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.98 0 99.83 1 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 20 34150662 34187921 1 1 57 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 14.98 0 99.03 1 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0053 X 29693325 29846109 2 2 57 2 0 0 0 0 0.11 0.02 4 0 0 4 4 4 15 8 12 14.98 90.35 6.27 0 2 3 Whitelist MELA-AU 0.54 0.09 0 0 0.48 0 No MELA-AU MELA-0053 MELA 0.27 2.05 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220862 MELA-0053 female alive C43.7 surgery unknown 67 6672 6672 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 219.47 MELA-AU::MELA-0055 1 9644166 63480813 5 7 38 2 1 1 1 2 0.9 0 14 0 0 14 9 9 24 9 9 27.96 55.05 41.98 0 4 5 Whitelist MELA-AU 0.77 0 0 0 0.92 1 High confidence MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma After polyploidization 12 0.16 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 2 32268667 184805032 1 2 38 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 27.96 0.09 99.8 3 1 2 Whitelist MELA-AU 0.54 0.93 NA 0 0.48 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 3 29345326 30027357 1 1 38 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 27.96 0.34 99.49 0 1 2 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 4 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 5 165284409 165673000 1 1 38 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 5 5 27.96 0.63 99.23 0 1 2 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 6 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 9 92128783 92776569 1 2 38 1 0 0 0 1 0.39 0 3 0 NA NA NA NA 6 4 4 27.96 59.81 39.49 0 2 1 Whitelist MELA-AU 0.68 0 0 NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 3 0.04 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 10 89709146 89972305 1 1 38 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.96 99.82 0 0 1 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 11 39366635 120049180 1 4 38 1 1 0 1 1 0.8 0.03 5 0 0 5 3 5 6 3 3 27.96 30.17 69.4 0 2 1 Whitelist MELA-AU 0.68 0.11 0 0 0.84 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 7 0.09 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 12 104555618 104571246 1 1 38 0 1 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 27.96 0 99.92 0 2 NA Whitelist MELA-AU 0.62 0.67 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 13 NA NA 0 0 38 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 7 7 0 0 0 0 0 0 Whitelist MELA-AU NA 0 0 NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 14 65796684 65884378 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.96 100 0 0 1 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 15 88612154 88674343 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.96 0.06 99.94 0 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 16 5498505 5681338 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.96 0.2 99.67 0 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 18 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 21 NA NA 0 0 38 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.63 NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0055 X 143645224 143848804 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.96 0.13 99.64 0 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0055 MELA 0.87 2.05 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220863 MELA-0055 female deceased C43.7 surgery complete response 49 1504 1504 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 49.47 MELA-AU::MELA-0056 1 11901384 152368115 10 12 224 1 3 4 2 2 0.57 0 25 0 0 25 3 7 39 6 12 82.84 96.97 0 16 4 7 Whitelist MELA-AU 0.68 0.02 0 0 0.64 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 22 0.05 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 2 134717568 156505138 14 14 224 4 4 3 3 0 0.96 0.05 17 0 0 17 12 13 31 15 17 82.84 99.89 0.01 0 4 6 Whitelist MELA-AU 0.98 0.17 0 0 0.98 1 High confidence MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma Before polyploidization 28 0.06 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 3 2310241 137002210 1 4 224 1 3 0 0 0 0.11 0 6 0 0 6 3 4 6 3 4 82.84 96.83 0 0 4 5 Whitelist MELA-AU 0.54 0.01 0 0 0.48 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 4 2943002 3146781 4 4 224 0 1 1 2 0 0.57 0.42 1 0 0 NA NA NA 14 5 5 82.84 63.68 33.75 0 4 NA Whitelist MELA-AU 0.68 0.67 0 0 0.64 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 5 51286118 102370225 3 13 224 1 1 1 0 10 0.8 0.04 12 0 0 12 3 7 22 3 6 82.84 97.32 0 2 4 5 Whitelist MELA-AU 11 0.62 0.13 0 0 0.84 1 Linked to high confidence MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma With other complex events 16 0.04 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 6 8986079 166943774 1 8 224 0 7 0 0 1 0 0.26 10 0 0 10 6 6 11 6 6 82.84 99.75 0 0 3 6 Whitelist MELA-AU 0.06 0.5 0 0 0.01 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 15 0.03 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 7 117916565 118203538 1 1 224 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 4 82.84 97.39 0 0 3 5 Whitelist MELA-AU 0.62 0.01 NA NA 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 8 15059093 17831361 7 7 224 1 1 2 3 0 0.67 0 8 0 0 8 3 8 29 4 11 82.84 72.23 24.35 0 2 6 Whitelist MELA-AU 0.77 0 0 0 0.74 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 14 0.03 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 9 115985694 132934442 1 3 224 1 2 0 0 0 0.3 0.12 9 0 0 9 5 5 9 5 6 82.84 99.3 0 0 4 6 Whitelist MELA-AU 0.62 0.3 0 0 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 10 55459524 133877568 1 6 224 0 2 0 0 4 0.11 0.2 4 0 0 4 3 4 5 3 5 82.84 0.41 99.41 0 2 3 Whitelist MELA-AU 0.54 0.42 0 0 0.48 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 11 61794852 122148653 12 20 224 2 5 2 3 8 0.57 0 25 0 0 25 11 16 30 11 11 82.84 86.27 13.17 11 2 1 Whitelist MELA-AU 0.96 0 0 0 0.64 1 High confidence MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma With other complex events 32 0.07 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 12 41057477 131959162 1 8 224 2 5 0 1 0 0.07 0.53 12 0 0 12 9 11 15 9 11 82.84 99.89 0.03 0 4 6 Whitelist MELA-AU 0.54 0.76 0 0 0.48 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 16 0.04 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 13 30730973 85579816 1 4 224 0 4 0 0 0 0.01 0.46 8 0 0 8 8 8 10 9 9 82.84 83.07 2.78 0 3 4 Whitelist MELA-AU 0.21 0.7 0 0 0.16 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 14 46972127 85460971 1 3 224 1 2 0 0 0 0.3 0.17 2 0 0 NA NA NA NA NA NA 82.84 84.09 0 0 4 7 Whitelist MELA-AU 0.62 0.39 0 0 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 15 44758440 65319798 1 4 224 0 2 0 1 1 0.3 0.54 2 0 0 NA NA NA 4 3 3 82.84 47.48 37.11 0 2 4 Whitelist MELA-AU 0.68 0.77 0 0 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 7 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 16 19902378 87561732 1 6 224 1 3 0 0 2 0.11 0.67 9 0 0 9 5 5 10 5 5 82.84 91.1 0.12 0 4 6 Whitelist MELA-AU 0.54 0.88 0 0 0.48 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 10 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 17 11229722 80918900 1 11 224 2 6 0 0 3 0.01 0.06 11 0 0 11 3 5 12 3 5 82.84 98 0.07 0 3 5 Whitelist MELA-AU 0.1 0.18 0 0 0.16 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 19 0.04 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 18 20859461 73093374 8 13 224 5 1 0 2 5 0.07 0 13 0 0 13 3 4 14 3 3 82.84 99.83 0 16 3 4 Whitelist MELA-AU 0.62 0 0 0 0.48 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 21 0.05 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 19 18568321 19428591 1 1 224 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 82.84 99.83 0 0 4 NA Whitelist MELA-AU 0.62 0.59 NA NA 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 20 24106520 24233878 1 1 224 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 4 6 82.84 59.03 33.97 0 2 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 21 46193279 46478140 1 1 224 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 82.84 77.73 0 1 5 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 22 22462221 40673363 1 4 224 0 4 0 0 0 0.01 0 9 0 0 9 3 3 14 3 4 82.84 76.2 0 0 6 2 Whitelist MELA-AU 0.21 0.01 0 0 0.16 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0056 X 23628924 98224982 1 4 224 0 4 0 0 0 0.01 0.02 1 0 0 NA NA NA NA NA NA 82.84 100 0 1 1 NA Whitelist MELA-AU 0.21 0.08 0 0 0.16 1 No MELA-AU MELA-0056 MELA 0.23 4.05 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220864 MELA-0056 male alive C30.0 surgery unknown 53 1860 1860 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 61.18 MELA-AU::MELA-0060 1 6433480 249059823 1 16 213 2 0 2 0 12 0.26 0.2 26 0 0 26 4 9 27 4 9 78.84 96.93 0 0 7 5 Whitelist MELA-AU 15 0.79 0.42 0 0 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 20 0.05 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 2 172753897 172791562 2 2 213 0 0 1 1 0 0.57 0.8 2 0 0 NA NA NA 13 5 7 78.84 56.78 43.13 0 0 2 Whitelist MELA-AU 0.68 0.95 0 0 0.64 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 4 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 3 7751706 116692736 1 9 213 4 2 0 0 3 0.06 0.69 11 0 0 11 6 9 14 6 11 78.84 94.12 5.76 0 4 2 Whitelist MELA-AU 0.68 0.89 0 0 0.48 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 15 0.04 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 4 14924927 157053120 2 8 213 0 1 1 2 4 0.57 0.58 9 0 0 9 5 7 15 5 7 78.84 96.53 3.38 0 4 2 Whitelist MELA-AU 14 0.62 0.81 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma With other complex events 12 0.03 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 5 27249846 145956339 1 3 213 0 2 0 1 0 0.3 0.09 5 0 0 5 4 5 9 4 4 78.84 91.25 8.59 0 3 4 Whitelist MELA-AU 0.62 0.24 0 0 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 6 159272829 159287476 1 1 213 1 0 0 0 0 0.39 0.15 1 0 NA NA NA NA 14 4 4 78.84 97.13 0 0 3 NA Whitelist MELA-AU 0.62 0.35 0 NA 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 7 146640987 147701429 2 2 213 0 0 1 1 0 0.57 0.07 4 0 0 4 4 4 31 8 8 78.84 99.78 0 0 6 9 Whitelist MELA-AU 0.68 0.2 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma After polyploidization 4 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 8 100092190 130785981 1 6 213 0 2 0 0 4 0.11 0.53 9 0 0 9 3 4 12 3 4 78.84 96.47 0 0 9 11 Whitelist MELA-AU 13 0.68 0.76 0 0 0.48 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 8 0.02 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 9 90217733 90357789 1 1 213 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 22 3 6 78.84 49.03 50.81 0 2 4 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 10 67788817 120595143 1 4 213 1 2 0 0 1 0.3 0.51 7 0 0 7 4 6 10 5 5 78.84 96.5 3.32 0 3 4 Whitelist MELA-AU 0.54 0.75 0 0 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 7 0.02 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 11 2569509 63788627 20 22 213 4 5 5 6 2 0.94 0 31 0 0 31 5 11 41 6 11 78.84 49.3 47.18 4 3 2 Whitelist MELA-AU 0.94 0 0 0 0.96 1 Low confidence MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma With other complex events 42 0.1 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 12 69623186 118023327 1 15 213 1 0 1 1 12 0.8 0 10 0 0 10 4 6 19 4 4 78.84 73.58 22.68 0 4 2 Whitelist MELA-AU 10_3_4 0.85 0 0 0 0.84 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 18 0.04 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 13 33763443 106456745 1 15 213 2 3 0 0 10 0.14 0.01 8 0 0 8 6 8 10 6 6 78.84 84.59 12.63 0 3 2 Whitelist MELA-AU 0.93 0.04 0 0 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 20 0.05 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 14 21034990 55876063 14 19 213 3 1 5 5 5 0.37 0 39 0 0 39 10 10 54 10 10 78.84 43.13 55.96 0 3 2 Whitelist MELA-AU 7 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma With other complex events 33 0.08 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 15 33116219 33626893 1 3 213 1 1 0 1 0 0.8 0.09 6 0 0 6 5 6 14 5 5 78.84 99.54 0.46 0 3 5 Whitelist MELA-AU 0.87 0.25 0 0 0.84 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 16 NA NA 0 0 213 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 17 28020509 70564432 1 4 213 1 1 0 0 2 0.57 0.67 7 0 0 7 0 3 10 3 5 78.84 73.77 21.75 0 3 1 Whitelist MELA-AU 0.68 0.87 0 0 0.64 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 18 33857623 33960145 2 2 213 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 10 5 6 78.84 99.24 0.72 0 4 5 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 4 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 19 40039904 40293286 2 2 213 1 0 1 0 0 0.57 0.45 4 NA 0 4 3 4 13 7 11 78.84 92.48 0 0 5 3 Whitelist MELA-AU 0.68 0.7 NA 0 0.64 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 4 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 20 24928970 32043472 1 2 213 1 1 0 0 0 0.57 0.34 4 NA 0 4 0 3 11 6 6 78.84 99.72 0.04 0 2 5 Whitelist MELA-AU 0.68 0.59 NA 0 0.64 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 4 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 21 19023312 32049335 1 3 213 2 1 0 0 0 0.3 0.75 6 0 0 6 4 5 9 4 5 78.84 68.43 0.95 0 6 8 Whitelist MELA-AU 0.62 0.92 0 0 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 6 0.01 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 22 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0060 X 98768877 98788106 1 1 213 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 6 3 3 78.84 57.2 42.57 0 2 NA Whitelist MELA-AU 0.62 1 0 NA 0.59 1 No MELA-AU MELA-0060 MELA 0.46 3.71 Skin-Melanoma NA 2 0 NA 4 MELA-AU DO220865 MELA-0060 female alive C43.7 surgery unknown 84 523 523 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 17.2 MELA-AU::MELA-0061 1 37374454 195685113 1 5 101 2 2 0 1 0 0.53 0.36 19 0 0 19 5 6 28 5 5 80.23 96.81 0.11 3 4 3 Whitelist MELA-AU 0.68 0.61 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 10 0.05 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 2 96865382 106123131 8 8 101 0 1 4 3 0 0.17 0.01 11 0 0 11 4 8 22 5 6 80.23 97.16 0.14 0 4 3 Whitelist MELA-AU 0.62 0.03 0 0 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 16 0.08 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 3 81140042 81171862 1 1 101 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 3 3 80.23 99.8 0 0 4 5 Whitelist MELA-AU 0.62 0.05 NA NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 4 168818150 175974913 6 6 101 1 3 1 1 0 0.57 0.23 6 0 0 6 5 6 9 5 5 80.23 99.9 0 1 3 5 Whitelist MELA-AU 0.68 0.46 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 12 0.06 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 5 8794755 108525721 1 2 101 0 2 0 0 0 0.11 0.1 6 NA 0.04 6 3 6 11 3 5 80.23 99.67 0.18 2 4 6 Whitelist MELA-AU 0.54 0.26 NA 0.05 0.48 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 4 0.02 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 6 2081154 134006266 1 5 101 3 2 0 0 0 0.14 0.83 10 0 0 10 3 5 11 3 4 80.23 33.75 63.29 0 7 2 Whitelist MELA-AU 0.62 0.97 0 0 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 10 0.05 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 7 65652380 77837525 1 2 101 0 2 0 0 0 0.11 0.38 5 0 0 5 3 5 13 5 9 80.23 97.46 0 0 4 3 Whitelist MELA-AU 0.54 0.63 0 0 0.48 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 4 0.02 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 8 118200140 118884350 1 1 101 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 10 5 6 80.23 96.45 0.13 1 5 6 Whitelist MELA-AU 0.62 0.2 NA NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 9 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 10 5383758 7157469 2 3 101 0 1 0 1 1 0.57 0.23 6 0.08 0 6 4 6 14 5 10 80.23 2.41 97.42 0 2 5 Whitelist MELA-AU 0.87 0.47 0.08 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 5 0.02 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 11 10649441 108793133 1 6 101 3 2 0 1 0 0.34 0.05 25 0 0 25 5 8 30 5 10 80.23 88.08 11.84 5 3 4 Whitelist MELA-AU 0.62 0.17 0 0 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 12 0.06 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 12 127526818 127577984 1 1 101 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 80.23 98.76 1.16 0 2 3 Whitelist MELA-AU 0.62 0.26 NA NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 13 47099673 47143118 1 1 101 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 80.23 99.38 0.62 0 3 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 14 55016011 75908135 1 5 101 0 0 1 1 3 0.57 0.14 7 0 0 7 3 7 15 5 13 80.23 99.98 0.02 0 4 2 Whitelist MELA-AU 0.93 0.33 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 7 0.03 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 15 101470355 101701635 2 2 101 0 1 1 0 0 0.57 0.02 2 0 0 NA NA NA 5 3 3 80.23 99.19 0 0 3 4 Whitelist MELA-AU 0.68 0.09 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 4 0.02 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 16 65780869 89411168 2 4 101 1 0 0 1 2 0.57 0 9 0 0 9 4 5 24 5 5 80.23 51.53 43.67 0 4 2 Whitelist MELA-AU 10 1 0 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 6 0.03 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 17 21529209 65533387 1 6 101 0 1 2 1 2 0.57 0.06 8 0 0 8 4 4 8 4 4 80.23 90.14 9.84 0 4 5 Whitelist MELA-AU 0.54 0.18 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 10 0.05 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 18 32764087 32928094 2 5 101 1 0 0 1 3 0.57 0.01 3 0 0 NA NA NA 10 5 9 80.23 95.31 0.04 0 2 3 Whitelist MELA-AU 0.68 0.03 0 0 0.64 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 7 0.03 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 19 58829215 58929284 1 1 101 0 1 0 0 0 0.39 0.05 1 0 NA NA NA NA 12 12 12 80.23 92.39 0 0 4 NA Whitelist MELA-AU 0.62 0.16 0 NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 20 33635516 33689677 1 1 101 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 80.23 99.04 0 0 4 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 21 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 22 NA NA 0 0 101 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0061 X NA NA 0 0 101 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.49 NA NA NA 0 No MELA-AU MELA-0061 MELA 0.91 3.42 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220866 MELA-0061 male deceased C43.6 surgery complete response 63 1188 1188 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 39.08 MELA-AU::MELA-0064 1 31290725 200736228 1 3 380 0 1 1 1 0 0.8 0 5 0 0 5 0 4 5 0 3 81.33 99.96 0 0 3 4 Whitelist MELA-AU 0.87 0 0 0 0.84 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 6 0.01 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 2 176107448 218942223 2 3 380 0 0 1 1 1 0.57 0 3 0 0 NA NA NA 4 3 4 81.33 97.49 2.42 0 2 3 Whitelist MELA-AU 0.87 0 0 0 0.64 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 5 0.01 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 3 26697248 52553769 1 5 380 3 2 0 0 0 0.14 0 4 0 0 4 4 4 5 5 5 81.33 98.01 1.84 0 2 3 Whitelist MELA-AU 0.62 0 0 0 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 10 0.01 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 4 110910388 111156564 1 1 380 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 81.33 99.99 0 0 3 5 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 5 75710 38913517 79 104 380 22 14 21 22 25 0.52 0 105 0 0 105 5 8 110 5 5 81.33 87.98 9.36 18 6 3 Whitelist MELA-AU 0.8 0 0 0 0.64 0 Low confidence MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma With other complex events 183 0.24 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 6 62737071 96700812 16 48 380 4 4 4 4 32 1 0 31 0 0 31 3 5 44 5 5 81.33 35.39 61.77 5 2 9 Whitelist MELA-AU 0.76 0 0 0 1 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 64 0.08 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 7 67546621 151505707 29 49 380 5 8 4 12 20 0.15 0 29 0 0 29 4 7 32 4 7 81.33 93.49 3.76 5 4 5 Whitelist MELA-AU 0.54 0 0 0 0.59 0 Low confidence MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma With other complex events 78 0.1 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 8 19016684 20064926 1 1 380 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 6 4 4 81.33 95.87 0.72 1 2 3 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 9 NA NA 0 0 380 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 10 100236375 100596527 1 1 380 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 81.33 99.82 0 0 4 5 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 11 51188282 94965346 90 178 380 25 23 23 19 88 0.84 0 94 0 0 94 4 7 100 4 7 81.33 14.78 81.67 14 6 4 Whitelist MELA-AU 16_5 0.78 0 0 0 0.88 0 Low confidence MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma With other complex events 268 0.35 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 12 NA NA 0 0 380 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 13 25991522 78694635 1 5 380 1 3 0 0 1 0.11 0.02 8 0 0 8 4 6 10 4 4 81.33 14.24 71.6 0 2 7 Whitelist MELA-AU 0.62 0.07 0 0 0.48 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 9 0.01 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 14 21530339 91928469 1 10 380 1 0 1 0 8 0.57 0.37 10 0 0 10 3 5 14 3 5 81.33 62.89 22.11 0 4 2 Whitelist MELA-AU 5 0.86 0.63 0 0 0.64 0 Linked to low confidence MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma With other complex events 12 0.02 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 15 NA NA 0 0 380 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.05 NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 16 6114212 66283260 1 7 380 1 1 1 0 4 0.8 0.87 10 0 0 10 6 6 13 8 8 81.33 86.78 13.21 0 2 3 Whitelist MELA-AU 0.96 1 0 0 0.84 0 Linked to low confidence MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma Canonical without polyploidization 10 0.01 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 17 NA NA 0 0 380 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 18 NA NA 0 0 380 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.02 NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 19 NA NA 0 0 380 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist MELA-AU NA 0.14 NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 20 NA NA 0 0 380 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 21 NA NA 0 0 380 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 22 28586504 28683528 1 1 380 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA 4 4 4 81.33 76.22 0 0 4 NA Whitelist MELA-AU 0.62 0.34 NA NA 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0064 X 104248545 104367864 1 1 380 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 81.33 96.54 0.08 0 2 3 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0064 MELA 0.66 3.77 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220867 MELA-0064 female alive C43.7 surgery unknown 81 1275 1275 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.94 MELA-AU::MELA-0066 1 160797429 216909159 9 11 355 1 2 4 2 2 0.55 0.01 17 0 0 17 5 11 41 5 12 63.67 67.76 29.27 0 4 2 Whitelist MELA-AU 0.62 0.03 0 0 0.64 1 Low confidence MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma With other complex events 20 0.03 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 2 187936793 219067754 1 4 355 1 0 0 1 2 0.57 0 4 0 0 4 0 3 10 4 5 63.67 99.88 0 0 3 4 Whitelist MELA-AU 1 0.68 0 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma With other complex events 6 0.01 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 3 77541575 89022426 6 7 355 2 2 1 1 1 0.88 0.35 7 0 0 7 4 7 22 6 11 63.67 55.7 44.19 0 2 4 Whitelist MELA-AU 0.96 0.6 0 0 0.91 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 13 0.02 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 4 190042381 190107244 1 1 355 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 8 3 5 63.67 99.95 0.03 0 2 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 5 147603976 147642249 2 2 355 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 6 3 6 63.67 67.91 29.4 9 3 NA Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 6 8869343 10232515 2 2 355 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 14 4 6 63.67 55.01 44.85 0 4 6 Whitelist MELA-AU 0.68 0.04 0 0 0.64 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 7 NA NA 0 0 355 0 0 0 0 0 NA 0 NA NA NA NA NA NA 12 4 10 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 8 46952702 47558704 2 2 355 1 0 0 1 0 0.57 0.18 2 0 0 NA NA NA 11 5 7 63.67 93.53 3.05 0 3 6 Whitelist MELA-AU 0.68 0.4 0 0 0.64 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 9 21876967 22197207 1 1 355 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 5 5 63.67 24.19 75.11 0 0 2 Whitelist MELA-AU 0.62 0.06 0 NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 10 NA NA 0 0 355 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 11 NA NA 0 0 355 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 12 6566797 21571778 1 2 355 1 0 0 0 1 0.39 0 1 NA NA NA NA NA 4 3 3 63.67 21.09 75.16 0 3 NA Whitelist MELA-AU 0.68 0 NA NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 3 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 13 NA NA 0 0 355 0 0 0 0 0 NA 0 NA NA NA NA NA NA 10 6 7 0 0 0 0 0 0 Whitelist MELA-AU NA 0.02 NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 14 71471614 102112284 11 24 355 1 2 5 3 13 0.36 0 12 0 0 12 4 6 14 4 6 63.67 4.86 95.14 0 1 2 Whitelist MELA-AU 0.87 0 0 0 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 35 0.05 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 15 44894197 53795392 3 6 355 2 0 0 1 3 0.3 0 8 0 0 8 3 4 20 4 9 63.67 97.72 2.28 0 2 3 Whitelist MELA-AU 17 0.62 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma With other complex events 9 0.01 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 16 66104436 66186756 1 1 355 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 12 4 9 63.67 95.12 0.09 0 2 3 Whitelist MELA-AU 0.62 0.11 NA NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 17 6966673 74491773 211 235 355 54 57 48 52 24 0.85 0 160 0 0 160 7 21 165 7 21 63.67 76.93 23.06 97 4 6 Whitelist MELA-AU 1 0.9 0 0 0 0.89 1 High confidence MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma With other complex events 446 0.63 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 18 888190 983463 1 2 355 1 0 0 0 1 0.39 0.01 3 NA NA NA NA NA 7 3 3 63.67 99.85 0.11 0 2 3 Whitelist MELA-AU 0.68 0.04 NA NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 3 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 19 NA NA 0 0 355 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.59 NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 20 NA NA 0 0 355 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 21 NA NA 0 0 355 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 22 NA NA 0 0 355 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0066 X 148088885 148104370 1 1 355 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 63.67 0 100 0 2 NA Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0066 MELA 0.42 3.25 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220868 MELA-0066 male alive C43.7 surgery complete response 61 1257 1257 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 41.35 MELA-AU::MELA-0067 1 NA NA 0 0 676 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 2 85137530 85457694 2 2 676 0 2 0 0 0 0.11 0 4 NA 0 4 0 3 4 0 3 23.29 0.1 99.8 0 2 3 Whitelist MELA-AU 0.54 0 NA 0 0.48 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 4 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 3 69834726 70198970 1 1 676 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 23.29 99.79 0.18 0 1 2 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 4 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 5 29674866 78208514 3 3 676 0 1 1 1 0 0.8 0 4 0 0 4 4 4 7 7 7 23.29 8.54 91.34 0 1 2 Whitelist MELA-AU 0.87 0 0 0 0.84 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 6 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 6 26830084 55474034 22 22 676 5 5 5 7 0 0.91 0.04 22 0 0 22 8 11 26 8 11 23.29 28.76 71.11 11 3 4 Whitelist MELA-AU 0.94 0.15 0 0 0.93 1 High confidence MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma With other complex events 44 0.03 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 7 129744428 147453672 13 149 676 1 5 4 3 136 0.44 0 64 0 0 64 8 10 74 11 12 23.29 43.72 56.04 14 3 2 Whitelist MELA-AU 11 0.87 0 0 0 0.64 1 High confidence MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma With other complex events 162 0.12 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 8 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 9 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 10 51569991 53704966 2 2 676 0 1 0 1 0 0.57 0 4 NA 0 4 4 4 6 6 6 23.29 64.73 35.09 0 1 2 Whitelist MELA-AU 0.68 0 NA 0 0.64 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 4 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 11 58806330 124114052 405 547 676 96 109 104 96 142 0.75 0 344 0 0 344 11 11 349 11 11 23.29 42.08 57.5 45 3 2 Whitelist MELA-AU 20_7 0.87 0 0 0 0.83 1 High confidence MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma With other complex events 952 0.7 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 12 104814464 105166585 1 1 676 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.29 0 99.92 0 2 NA Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 13 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 14 NA NA 0 0 676 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 15 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 16 NA NA 0 0 676 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 17 38626304 38951791 2 2 676 1 1 0 0 0 0.57 0 3 0 0 NA NA NA NA NA NA 23.29 0.33 99.66 0 2 1 Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 4 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 18 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 19 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 20 18728454 50145269 10 11 676 2 3 2 3 1 0.94 0.89 15 0 0 15 7 15 19 9 9 23.29 89.05 3.95 3 3 2 Whitelist MELA-AU 0.87 1 0 0 0.96 1 High confidence MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma With other complex events 21 0.02 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 21 NA NA 0 0 676 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 22 38335963 38730681 3 3 676 0 1 1 1 0 0.8 0.37 7 0 0 7 3 5 7 3 5 23.29 0.33 99.67 0 2 3 Whitelist MELA-AU 0.87 0.62 0 0 0.84 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 6 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0067 X 67141574 119478835 1 3 676 1 0 1 0 1 0.57 0 5 NA 0 5 5 5 6 6 6 23.29 56.7 43.3 0 1 2 Whitelist MELA-AU 0.62 0 NA 0 0.64 1 No MELA-AU MELA-0067 MELA 0.76 2.03 Skin-Melanoma NA 5 0 NA 2 MELA-AU DO220869 MELA-0067 female alive C43.7 surgery complete response 80 3690 3690 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 121.38 MELA-AU::MELA-0069 1 35921495 205812685 1 7 401 0 3 0 0 4 0.03 0 9 0 0 9 5 9 15 7 7 79.5 100 0 0 4 3 Whitelist MELA-AU 0.62 0 0 0 0.33 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 10 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 2 13198317 216809264 11 26 401 3 2 4 2 15 0.8 0.1 51 0 0 51 5 8 58 5 10 79.5 99.81 0.08 0 5 6 Whitelist MELA-AU 6_9 0.75 0.27 0 0 0.84 0 Low confidence MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma With other complex events 37 0.05 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 3 28854014 29840238 2 2 401 0 2 0 0 0 0.11 0.06 3 0 0 NA NA NA 38 7 8 79.5 89.09 7.85 0 3 4 Whitelist MELA-AU 0.54 0.19 0 0 0.48 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 4 55410279 143077777 1 4 401 1 1 0 0 2 0.57 0 4 0 0 4 3 4 5 3 3 79.5 99.99 0 0 3 1 Whitelist MELA-AU 0.62 0 0 0 0.64 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 5 26286465 26310544 2 2 401 0 2 0 0 0 0.11 0.01 2 0 0 NA NA NA 8 5 5 79.5 99.84 0.04 0 4 5 Whitelist MELA-AU 0.54 0.05 0 0 0.48 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 6 3865883 64390630 49 129 401 11 9 15 14 80 0.6 0 106 0 0 106 6 7 113 6 8 79.5 34.95 62.21 18 4 3 Whitelist MELA-AU 14_2 0.62 0 0 0 0.68 0 Low confidence MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma With other complex events 178 0.22 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 7 95860155 101095784 1 2 401 0 2 0 0 0 0.11 0 5 0 0 5 0 3 26 7 12 79.5 97.34 0 0 5 7 Whitelist MELA-AU 0.54 0 0 0 0.48 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 8 129928629 130843435 3 3 401 0 3 0 0 0 0.03 0.91 9 0 0 9 0 3 33 7 7 79.5 96.58 0 0 9 6 Whitelist MELA-AU 0.41 1 0 0 0.33 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 9 1637851 118991852 1 14 401 2 2 1 0 9 0.53 0.9 12 0 0 12 4 5 15 5 7 79.5 87.26 12.07 0 3 4 Whitelist MELA-AU 2 0.98 1 0 0 0.64 0 Linked to low confidence MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma With other complex events 19 0.02 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 10 101743995 101759544 1 1 401 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 11 5 11 79.5 64.46 35.36 0 2 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 2 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 11 66817953 80753867 64 134 401 20 14 16 14 70 0.68 0 122 0 0 122 4 7 158 5 13 79.5 26.46 70.02 7 19 8 Whitelist MELA-AU 6_9 0.87 0 0 0 0.76 0 Low confidence MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma With other complex events 198 0.25 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 12 66516499 66529878 2 2 401 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 12 4 6 79.5 96.26 0 0 5 3 Whitelist MELA-AU 0.54 0.04 0 0 0.48 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 13 78130461 95219022 1 4 401 1 1 0 0 2 0.57 0.01 6 0 0 6 3 4 7 3 4 79.5 82.69 17.31 0 4 2 Whitelist MELA-AU 1 0.68 0.06 0 0 0.64 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 14 77426835 91651122 2 2 401 0 0 1 1 0 0.57 0.25 4 0 0 4 4 4 10 8 8 79.5 99.09 0 0 3 4 Whitelist MELA-AU 0.68 0.49 0 0 0.64 0 Linked to low confidence MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma After polyploidization 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 15 23677609 90590233 1 7 401 3 0 0 0 4 0.03 0.65 6 0 0 6 4 6 9 5 9 79.5 99.76 0.1 0 3 1 Whitelist MELA-AU 0.62 0.86 0 0 0.33 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 10 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 16 67407071 85496872 1 5 401 1 4 0 0 0 0.04 0.09 5 0 0 5 4 5 10 5 6 79.5 95.45 0 0 3 4 Whitelist MELA-AU 0.45 0.24 0 0 0.36 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 10 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 17 26856723 65767146 1 5 401 0 3 0 0 2 0.03 0.28 7 0 0 7 7 7 7 7 7 79.5 99.98 0 0 3 4 Whitelist MELA-AU 0.45 0.53 0 0 0.33 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 8 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 18 74533488 74739074 2 2 401 0 1 0 1 0 0.57 0.53 1 0 0 NA NA NA 10 6 6 79.5 99.96 0 0 6 NA Whitelist MELA-AU 0.68 0.76 0 0 0.64 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 19 15218248 15546808 1 1 401 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 12 7 7 79.5 52.19 40.54 0 2 3 Whitelist MELA-AU 0.62 0.03 NA NA 0.59 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 2 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 20 15040736 15669824 1 2 401 2 0 0 0 0 0.11 0.06 4 NA 0 4 4 4 10 5 7 79.5 99.03 0 0 5 6 Whitelist MELA-AU 0.54 0.18 NA 0 0.48 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 4 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 21 19354807 39088407 3 3 401 2 1 0 0 0 0.3 0.64 8 0 0 8 8 8 9 9 9 79.5 62.3 15.43 0 2 3 Whitelist MELA-AU 0.62 0.85 0 0 0.59 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 22 NA NA 0 0 401 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.27 NA NA NA 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 0 0 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0069 X 13009899 32209222 1 3 401 1 2 0 0 0 0.3 0 6 0 0 6 4 6 10 5 5 79.5 2.89 97.11 0 2 3 Whitelist MELA-AU 0.62 0 0 0 0.59 0 No MELA-AU MELA-0069 MELA 0.97 3.9 Skin-Melanoma NA 6 0.01 NA 5 MELA-AU DO220870 MELA-0069 male deceased C43.7 surgery complete response 60 1923 1923 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 63.26 MELA-AU::MELA-0070 1 6223724 6467276 1 1 450 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 4 4 50.63 67 33 0 1 2 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 2 28606019 96476448 2 25 450 1 0 1 0 23 0.57 0.93 7 0 0 7 4 7 13 6 6 50.63 92.6 7.29 0 2 3 Whitelist MELA-AU 12_3_4_9 0.68 1 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 27 0.03 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 3 107828103 110133076 20 65 450 5 7 3 5 45 0.66 0 13 0 0 13 5 7 14 5 6 50.63 88.86 7.95 0 3 2 Whitelist MELA-AU 12 0.73 0 0 0 0.74 1 Low confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 85 0.09 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 4 42650241 45636635 4 5 450 1 2 1 0 1 0.57 0.78 8 0 0 8 7 8 31 9 9 50.63 29.24 68.31 0 3 7 Whitelist MELA-AU 0.68 0.93 0 0 0.64 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 9 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 5 703450 42018198 3 25 450 1 2 1 2 19 0.88 0.14 30 0 0 30 15 15 35 15 15 50.63 26.31 73.54 0 5 4 Whitelist MELA-AU 20_9 0.92 0.34 0 0 0.91 1 High confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 31 0.03 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 6 62778809 64264826 2 3 450 0 1 0 1 1 0.57 0 5 0 0 5 3 4 17 4 5 50.63 35.78 61.4 3 4 2 Whitelist MELA-AU 0.87 0 0 0 0.64 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 5 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 7 1718338 150785632 1 6 450 0 1 1 3 1 0.28 0 5 0 0 5 3 5 6 4 4 50.63 97.45 0 0 4 3 Whitelist MELA-AU 0.62 0 0 0 0.59 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 11 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 8 89785873 89805621 4 4 450 2 1 0 1 0 0.57 0.33 1 0 0 NA NA NA 16 6 6 50.63 99.94 0.05 1 5 NA Whitelist MELA-AU 0.68 0.59 0 0 0.64 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 8 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 9 447092 9513409 3 30 450 1 0 2 0 27 0.3 0 25 0 0 25 6 11 56 9 11 50.63 74.26 25.53 0 3 2 Whitelist MELA-AU 16_17_20 0.93 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 33 0.04 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 10 71906998 83206165 4 4 450 1 1 1 1 0 1 0.01 7 0 0 7 7 7 19 12 12 50.63 61.66 38.17 2 2 1 Whitelist MELA-AU 1 0.06 0 0 1 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 8 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 11 69251922 83096232 33 107 450 10 7 9 7 74 0.85 0 92 0 0 92 4 7 102 5 5 50.63 19.75 80.03 0 5 4 Whitelist MELA-AU 13_16_5_9 0.76 0 0 0 0.89 1 Low confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 140 0.16 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 12 55086091 64480690 5 43 450 2 1 2 0 38 0.53 0 5 0 0 5 5 5 11 11 11 50.63 1.06 98.86 0 2 3 Whitelist MELA-AU 17_3 0.86 0 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma Canonical without polyploidization 48 0.05 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 13 26276510 102632901 1 4 450 1 1 0 0 2 0.57 0 6 0 0 6 5 6 8 6 6 50.63 91.37 8.63 0 3 2 Whitelist MELA-AU 0.62 0.01 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma Canonical without polyploidization 6 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 14 22746323 50625574 1 6 450 2 1 0 0 3 0.3 0.1 10 0 0 10 7 10 12 7 7 50.63 16.62 67.47 0 2 1 Whitelist MELA-AU 20 0.93 0.27 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma Canonical without polyploidization 9 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 15 NA NA 0 0 450 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 16 69653875 83050346 5 52 450 2 1 1 1 47 0.9 0 34 0 0 34 9 10 55 9 10 50.63 71.02 24.45 0 3 5 Whitelist MELA-AU 17 0.68 0 0 0 0.92 1 High confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 57 0.06 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 17 38259169 65526580 7 44 450 3 1 2 1 37 0.67 0 30 0 0 30 9 13 43 17 23 50.63 42.29 57.7 0 4 5 Whitelist MELA-AU 12_16_9 0.62 0 0 0 0.74 1 High confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 51 0.06 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 18 NA NA 0 0 450 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 19 17041141 32193724 1 1 450 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 50.63 16.48 76.25 0 2 3 Whitelist MELA-AU 0.62 0.07 NA NA 0.59 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 20 37323724 59336022 4 16 450 1 0 1 2 12 0.57 0 21 0 0 21 10 11 26 10 13 50.63 33.58 59.23 0 4 3 Whitelist MELA-AU 14_5_9 0.95 0 0 0 0.64 1 High confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma With other complex events 20 0.02 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 21 27626254 45159888 1 5 450 2 0 0 0 3 0.11 0.08 4 0 0 4 3 4 9 3 7 50.63 44.68 22.63 0 4 2 Whitelist MELA-AU 17_3 0.62 0.23 0 0 0.48 1 Linked to high confidence MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma Before polyploidization 7 0.01 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 22 41781924 41808867 1 1 450 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 50.63 0.26 99.74 0 2 NA Whitelist MELA-AU 0.62 0.22 NA NA 0.59 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0070 X 65433869 82262323 1 2 450 1 0 0 0 1 0.39 0 3 NA NA NA NA NA 4 3 3 50.63 40.9 55.72 0 2 1 Whitelist MELA-AU 0.68 0 NA NA 0.59 1 No MELA-AU MELA-0070 MELA 0.75 2.64 Skin-Melanoma NA 3 0 NA 2 MELA-AU DO220871 MELA-0070 female alive C43.7 surgery unknown 87 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 4.24 MELA-AU::MELA-0075 1 27085110 155097256 1 2 42 2 0 0 0 0 0.11 0.02 1 0 0 NA NA NA NA NA NA 21.36 1.08 98.92 66 2 NA Whitelist MELA-AU 0.54 0.07 0 0 0.48 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 2 32801927 33535551 1 1 42 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 5 5 5 21.36 0.9 96.13 12 1 2 Whitelist MELA-AU 0.62 0.8 NA NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 3 119043942 169508198 1 1 42 1 0 0 0 0 0.39 1 2 0 0 NA NA NA NA NA NA 21.36 25.48 74.38 40 1 2 Whitelist MELA-AU 0.62 1 0 0 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 4 18906900 18930205 1 1 42 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA NA NA NA 21.36 0.01 99.97 3 1 2 Whitelist MELA-AU 0.62 0.62 0 NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 5 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 6 NA NA 0 0 42 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.57 NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 7 33186093 134046130 1 2 42 1 1 0 0 0 0.57 1 7 NA 0 7 3 5 8 3 6 21.36 97.42 0 185 4 3 Whitelist MELA-AU 0.68 1 NA 0 0.64 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 8 107423306 107813829 1 1 42 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 4 3 4 21.36 96.2 0.27 29 2 3 Whitelist MELA-AU 0.62 0.37 0 NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 9 21956241 21971865 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.36 0 99.27 0 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 10 72902980 90393121 8 8 42 2 0 3 3 0 0.39 0 14 0 0 14 14 14 19 17 19 21.36 80.72 15.7 11 1 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma Canonical without polyploidization 16 0.19 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 11 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 12 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 13 92005192 92034523 1 1 42 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.36 0.03 85.82 17 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 16 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 17 53136512 53151479 1 1 42 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 21.36 0.02 99.98 4 1 2 Whitelist MELA-AU 0.62 0.57 NA NA 0.59 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 18 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 20 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 21 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0075 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0075 MELA 0.88 2.02 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220872 MELA-0075 male deceased C43.7 surgery unknown 69 265 265 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.72 MELA-AU::MELA-0076 1 177814141 178426284 1 1 59 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 3 3 28.14 0.41 99.59 0 2 3 Whitelist MELA-AU 0.62 0.58 NA NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 2 33799148 232615092 1 3 59 1 2 0 0 0 0.3 0.48 4 0 0 4 3 4 5 3 3 28.14 0.14 99.75 43 2 1 Whitelist MELA-AU 0.62 0.73 0 0 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 6 0.05 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 3 NA NA 0 0 59 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.32 NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 4 190002977 190081549 1 1 59 1 0 0 0 0 0.39 0.8 2 0 NA NA NA NA 4 3 3 28.14 4.82 94.98 17 0 1 Whitelist MELA-AU 0.62 0.95 0 NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 5 166213184 167135025 2 2 59 0 0 1 1 0 0.57 1 2 0.01 0 NA NA NA NA NA NA 28.14 0.02 99.85 25 1 2 Whitelist MELA-AU 0.68 1 0.01 0 0.64 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 4 0.03 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 6 NA NA 0 0 59 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 7 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 8 NA NA 0 0 59 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.93 NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 9 22025714 22429847 1 1 59 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 28.14 99.33 0 1 0 1 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 10 120634163 120960876 1 1 59 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 5 3 3 28.14 0.32 96.18 13 2 3 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 11 121499838 122393509 7 7 59 2 2 1 2 0 0.93 0 5 0 0 5 3 5 11 3 5 28.14 0.93 98.64 6 2 1 Whitelist MELA-AU 0.96 0 0 0 0.95 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 14 0.12 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 12 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 14 24748061 58748685 17 17 59 2 4 5 6 0 0.56 0 24 0 0 24 10 24 25 10 10 28.14 99.09 0 8 5 3 Whitelist MELA-AU 0.68 0 0 0 0.64 1 High confidence MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma With other complex events 34 0.29 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 15 52622920 62125583 1 4 59 1 1 0 0 2 0.57 0.08 3 NA 0 NA NA NA 4 4 4 28.14 59.98 40.02 0 2 1 Whitelist MELA-AU 0.54 0.23 NA 0 0.64 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 6 0.05 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 16 6221873 6585263 1 2 59 1 0 0 0 1 0.39 0.67 3 NA NA NA NA NA 5 4 4 28.14 55.51 44.4 0 2 1 Whitelist MELA-AU 0.54 0.87 NA NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 3 0.03 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 17 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 18 54110779 54129380 1 1 59 0 1 0 0 0 0.39 0.21 2 0 NA NA NA NA NA NA NA 28.14 0.02 99.94 20 2 3 Whitelist MELA-AU 0.62 0.44 0 NA 0.59 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0076 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0076 MELA 0.53 1.84 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220873 MELA-0076 male alive C43.9 surgery unknown 39 4051 4051 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 133.26 MELA-AU::MELA-0160 1 NA NA 0 0 96 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.12 NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 2 240251604 240297103 1 1 96 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA 5 3 3 59.92 68.28 29.01 0 1 2 Whitelist MELA-AU 0.62 0.2 NA NA 0.59 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 3 59981651 152683749 1 5 96 1 1 0 0 3 0.57 1 6 0 0 6 3 3 7 3 3 59.92 96.85 0 7 4 3 Whitelist MELA-AU 9 0.68 1 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma With other complex events 7 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 4 11615554 33413359 1 1 96 0 0 1 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 59.92 0 99.97 4 2 NA Whitelist MELA-AU 0.62 0.26 NA NA 0.59 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 5 376141 17139643 18 19 96 5 4 5 4 1 0.97 0 13 0 0 13 5 10 13 5 8 59.92 2.53 97.34 1 3 1 Whitelist MELA-AU 0.93 0 0 0 0.98 1 Low confidence MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma With other complex events 37 0.19 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 6 77663562 118265446 1 2 96 0 1 1 0 0 0.57 0.13 2 NA 0 NA NA NA NA NA NA 59.92 99.84 0 1 4 5 Whitelist MELA-AU 0.68 0.32 NA 0 0.64 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 7 51693710 52352161 1 1 96 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 59.92 97.45 0 5 7 8 Whitelist MELA-AU 0.62 1 0 NA 0.59 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 8 NA NA 0 0 96 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.26 NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 9 80306032 139519485 34 38 96 13 7 5 9 4 0.25 0 43 0 0 43 13 15 47 13 16 59.92 49.81 50.05 0 4 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma With other complex events 72 0.38 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 10 78337812 122524795 1 2 96 1 1 0 0 0 0.57 0.33 4 NA 0 4 3 4 5 3 3 59.92 7.21 92.57 0 2 1 Whitelist MELA-AU 0.68 0.58 NA 0 0.64 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 11 25846291 25858578 1 1 96 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 4 4 59.92 37.6 61.98 0 1 4 Whitelist MELA-AU 0.62 0.33 NA NA 0.59 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 12 92604092 92625834 1 1 96 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 8 6 6 59.92 26.17 69.82 0 1 2 Whitelist MELA-AU 0.62 0.58 NA NA 0.59 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 13 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 14 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 16 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 17 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 18 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 19 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0160 X NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0160 MELA 0.68 3.2 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 2 MELA-AU DO220874 MELA-0160 male deceased C43.5 surgery complete response 55 4566 4566 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 150.2 MELA-AU::MELA-0161 1 61225657 190838999 1 5 27 3 2 0 0 0 0.14 0.06 4 0 0 4 4 4 5 5 5 39.32 0.25 99.75 164 1 2 Whitelist MELA-AU 0.62 0.18 0 0 0.59 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 10 0.19 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 2 139955839 165437084 5 5 27 1 0 2 2 0 0.53 0.01 3 0 0 NA NA NA 7 7 7 39.32 10.74 89.16 83 2 1 Whitelist MELA-AU 0.68 0.03 0 0 0.64 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 10 0.19 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 3 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 5 128672502 168732501 1 2 27 2 0 0 0 0 0.11 0.24 4 0 0 4 4 4 5 5 5 39.32 99.61 0.27 138 2 3 Whitelist MELA-AU 0.54 0.48 0 0 0.48 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 4 0.07 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 6 71070800 71134713 1 1 27 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA 6 4 4 39.32 84.62 15.24 0 2 3 Whitelist MELA-AU 0.62 0.88 NA NA 0.59 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 2 0.04 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 7 NA NA 0 0 27 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 6 4 6 0 0 0 0 0 0 Whitelist MELA-AU NA 0.86 NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 8 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 10 89530044 95320031 1 2 27 1 1 0 0 0 0.57 0.13 4 0 0 4 3 4 6 3 3 39.32 96.36 0.1 4 1 0 Whitelist MELA-AU 0.68 0.31 0 0 0.64 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 4 0.07 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 11 49501476 49526065 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 39.32 0.02 99.56 69 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 2 0.04 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 13 NA NA 0 0 27 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.83 NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 17 42673296 43068712 1 1 27 0 1 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 39.32 26.35 73.63 0 2 NA Whitelist MELA-AU 0.62 0.38 NA NA 0.59 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 2 0.04 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 18 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0161 X NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0161 MELA 0.62 2.24 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220875 MELA-0161 male deceased C43.4 surgery unknown 64 2613 2613 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 85.95 MELA-AU::MELA-0167 1 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 2 104896256 104995375 1 1 339 0 0 0 1 0 0.39 0 1 NA NA NA NA NA NA NA NA 61.52 99.9 0 443 3 NA Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 3 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 4 15004135 15077738 1 1 339 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 61.52 99.89 0 21 3 6 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 5 1403933 109603948 14 52 339 6 4 2 2 38 0.37 0 31 0 0 31 7 10 40 7 8 61.52 19.14 80.75 2498 5 4 Whitelist MELA-AU 12_7 0.68 0 0 0 0.59 1 High confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 66 0.1 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 6 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 7 29323351 150218313 20 64 339 1 9 6 4 44 0.08 0 47 0 0 47 6 10 48 6 10 61.52 94.36 5.41 2508 4 6 Whitelist MELA-AU 0.62 0 0 0 0.48 1 Low confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 84 0.12 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 8 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 9 18954759 39157408 6 6 339 2 2 1 1 0 0.88 0.16 8 0 0 8 4 8 13 6 6 61.52 17.63 82.21 197 2 5 Whitelist MELA-AU 0.93 0.37 0 0 0.91 1 Low confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 12 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 10 NA NA 0 0 339 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 11 14788852 130055978 137 167 339 44 25 34 34 30 0.15 0 188 0 0 188 7 12 196 9 12 61.52 83.69 12.56 1221 4 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 304 0.45 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 12 45517029 71387082 4 22 339 1 1 2 0 18 0.57 0 15 0 0 15 5 6 26 5 5 61.52 50.88 45.37 612 3 5 Whitelist MELA-AU 11 0.94 0 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 26 0.04 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 13 19899558 31650245 1 9 339 2 0 0 1 6 0.3 0.65 2 0 0 NA NA NA 4 3 3 61.52 83.07 14.15 0 3 4 Whitelist MELA-AU X 0.68 0.86 0 0 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 12 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 14 NA NA 0 0 339 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.24 0 NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 15 NA NA 0 0 339 0 0 0 0 0 NA 0.87 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 0 NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 16 79032278 79202525 1 1 339 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 61.52 0.19 99.71 130 1 2 Whitelist MELA-AU 0.62 0.14 0 NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 17 10652455 49032851 1 7 339 0 1 1 1 4 0.8 1 8 0 0 8 4 5 8 4 4 61.52 78.84 16.71 147 2 4 Whitelist MELA-AU 11 0.96 1 0 0 0.84 1 Linked to high confidence MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma With other complex events 10 0.01 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 18 NA NA 0 0 339 0 0 0 0 0 NA 0.73 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.91 0 NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 19 15540265 16772783 1 1 339 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 0 4 61.52 97.74 2.08 1 2 3 Whitelist MELA-AU 0.62 0.07 NA NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 20 14852125 14938233 1 1 339 1 0 0 0 0 0.39 0.26 2 0 NA NA NA NA NA NA NA 61.52 99.03 0 114 3 4 Whitelist MELA-AU 0.62 0.51 0 NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 21 NA NA 0 0 339 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.7 NA NA NA 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 0 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 22 17560405 17884161 1 1 339 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 61.52 23.78 65.11 0 1 2 Whitelist MELA-AU 0.62 0.7 NA NA 0.59 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 2 0 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0167 X 332279 109019164 2 13 339 1 0 1 0 11 0.57 1 8 0 0 8 8 8 8 8 8 61.52 22.77 77.02 765 1 2 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0167 MELA 0.74 2.9 Skin-Melanoma NA 15 0.02 stopgain;nonsynonymous_SNV,17_7578212_A_G;17_7578235_C_T,CN:4 3 MELA-AU DO220877 MELA-0167 male alive C43.4 surgery unknown 25 427 427 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 14.05 MELA-AU::MELA-0168 1 175325333 221934850 1 2 57 2 0 0 0 0 0.11 0.63 4 0 0 4 4 4 9 5 9 85.04 96.84 0.19 16 2 4 Whitelist MELA-AU 0.54 0.84 0 0 0.48 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 2 NA NA 0 0 57 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.25 NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 3 NA NA 0 0 57 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.69 NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 4 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 5 NA NA 0 0 57 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.51 NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 6 67475142 169821533 6 6 57 1 1 2 2 0 0.88 0.02 6 0 0 6 6 6 7 7 7 85.04 43.77 56.08 23 2 4 Whitelist MELA-AU 0.93 0.08 0 0 0.91 0 Low confidence MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma Before polyploidization 12 0.11 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 7 84981086 85149366 1 1 57 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 5 5 85.04 97.33 2.43 5 2 4 Whitelist MELA-AU 0.62 0.62 NA NA 0.59 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 2 0.02 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 8 80033613 141580750 1 2 57 2 0 0 0 0 0.11 0.54 6 0 0 6 3 4 7 3 5 85.04 99.94 0.05 76 5 2 Whitelist MELA-AU 0.54 0.77 0 0 0.48 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 9 79607579 79647879 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 85.04 99.29 0 0 3 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 2 0.02 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 10 NA NA 0 0 57 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.59 0 NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 11 50346413 131443035 3 7 57 2 0 1 0 4 0.3 0 4 0 0 4 3 4 4 3 4 85.04 59.78 39.67 26 4 2 Whitelist MELA-AU 0.62 0.01 0 0 0.59 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 10 0.09 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 12 34743064 34799338 1 1 57 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 85.04 99.92 0 6 3 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 2 0.02 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 14 26392424 107133498 2 2 57 2 0 0 0 0 0.11 0.43 3 0.01 0 NA NA NA 5 4 4 85.04 82.01 2.79 21 4 3 Whitelist MELA-AU 0.54 0.68 0.01 0 0.48 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 16 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 17 18473219 21264392 1 4 57 1 1 0 0 2 0.57 0 6 0 0 6 4 4 10 4 4 85.04 80.03 19.95 0 6 4 Whitelist MELA-AU 22 0.68 0.02 0 0 0.64 0 Linked to low confidence MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma Before polyploidization 6 0.05 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 18 53946141 53969047 1 1 57 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 85.04 99.96 0 3 4 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 2 0.02 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 20 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 22 17962914 29759005 10 14 57 3 3 1 3 4 0.75 0 15 0 0 15 6 11 17 6 6 85.04 13.95 62.27 0 4 2 Whitelist MELA-AU 0.9 0 0 0 0.83 0 Low confidence MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma With other complex events 24 0.21 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0168 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0168 MELA 0.72 3.64 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220878 MELA-0168 female alive C43.6 surgery unknown 46 4136 4136 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 136.05 MELA-AU::MELA-0169 1 19286163 215697431 1 7 95 5 0 1 1 0 0.04 0 21 0 0 21 5 7 22 5 7 87.26 99.92 0.08 49 4 2 Whitelist MELA-AU 0.47 0.02 0 0 0.38 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 14 0.07 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 2 133558011 141166226 1 2 95 2 0 0 0 0 0.11 0.35 4 0 0 4 3 4 5 3 5 87.26 99.88 0.01 11 4 2 Whitelist MELA-AU 0.54 0.61 0 0 0.48 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 3 13220779 13649340 2 2 95 0 0 1 1 0 0.57 0.84 4 0 0 4 3 4 14 5 5 87.26 99.85 0 0 4 5 Whitelist MELA-AU 0.68 0.98 0 0 0.64 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 4 20063507 182320345 1 7 95 7 0 0 0 0 0 0.68 14 0 0 14 4 14 15 5 15 87.26 99.91 0.07 49 4 2 Whitelist MELA-AU 0.02 0.88 0 0 0.01 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 14 0.07 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 5 63421519 63481136 1 1 95 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 5 87.26 99.84 0.03 14 2 4 Whitelist MELA-AU 0.62 0.32 NA NA 0.59 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 6 70072538 100661050 5 13 95 0 2 2 1 8 0.53 0 20 0 0 20 10 20 34 10 20 87.26 54.66 45.16 21 4 2 Whitelist MELA-AU 0.9 0 0 0 0.64 1 High confidence MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma With other complex events 18 0.09 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 7 NA NA 0 0 95 0 0 0 0 0 NA 0.49 NA 0.15 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.74 0.15 NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 8 54641897 146053044 1 2 95 2 0 0 0 0 0.11 0.82 9 0 0 9 5 7 12 5 7 87.26 94.14 2.23 53 8 6 Whitelist MELA-AU 0.54 0.96 0 0 0.48 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 9 21983366 115089999 1 2 95 2 0 0 0 0 0.11 0.79 4 0.04 0 4 4 4 5 5 5 87.26 98.87 0.42 20 2 3 Whitelist MELA-AU 0.54 0.94 0.04 0 0.48 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 10 53167038 53191068 1 1 95 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 3 7 87.26 99.8 0.02 7 2 4 Whitelist MELA-AU 0.62 1 0 NA 0.59 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 11 NA NA 0 0 95 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.58 NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 12 32068202 128644478 1 5 95 3 1 0 0 1 0.11 0.81 10 0 0 10 3 4 11 3 5 87.26 95.05 1.2 27 4 3 Whitelist MELA-AU 0.62 0.95 0 0 0.48 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 9 0.05 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 13 31482954 36718868 2 3 95 1 1 0 0 1 0.57 0 5 0 0 5 5 5 15 5 6 87.26 99.94 0.06 0 5 6 Whitelist MELA-AU 0.87 0 0 0 0.64 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 5 0.03 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 14 57850573 57886025 1 1 95 1 0 0 0 0 0.39 0.55 2 0 NA NA NA NA 6 4 4 87.26 99.97 0.03 1 2 3 Whitelist MELA-AU 0.62 0.77 0 NA 0.59 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 15 61390558 62890198 1 2 95 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 87.26 99.98 0.02 0 4 2 Whitelist MELA-AU 0.54 1 NA 0 0.48 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 16 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 17 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 18 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 19 NA NA 0 0 95 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 20 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 21 17643924 17656082 1 1 95 0 0 1 0 0 0.39 0.11 2 NA NA NA NA NA NA NA NA 87.26 77.47 0 0 3 4 Whitelist MELA-AU 0.62 0.29 NA NA 0.59 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 22 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0169 X NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0169 MELA 0.78 4 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220879 MELA-0169 male deceased C43.5 surgery unknown 67 1810 1810 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 59.54 MELA-AU::MELA-0170 1 8773843 177276986 1 2 83 1 1 0 0 0 0.57 1 5 0 0 5 3 5 6 4 6 74.97 99.91 0.08 12 5 2 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 2 212706931 212770560 1 1 83 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA NA NA NA 74.97 99.88 0.03 3 2 4 Whitelist MELA-AU 0.62 0.37 0 NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 3 113774252 114884166 1 2 83 2 0 0 0 0 0.11 0.66 4 0 0 4 4 4 5 5 5 74.97 99.42 0.44 1 2 4 Whitelist MELA-AU 0.54 0.87 0 0 0.48 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 4 5123431 49258772 11 12 83 4 2 2 3 1 0.8 0 19 0 0 19 7 8 22 7 8 74.97 79.27 20.71 6 4 2 Whitelist MELA-AU 0.68 0.01 0 0 0.84 1 High confidence MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma With other complex events 23 0.14 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 5 NA NA 0 0 83 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.39 NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 6 70967028 92341760 18 21 83 4 10 4 0 3 0.01 0 31 0 0 31 4 5 35 4 4 74.97 52.5 47.35 16 4 8 Whitelist MELA-AU 13 0.52 0 0 0 0.19 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 39 0.23 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 7 5355577 5372060 1 1 83 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 74.97 99.78 0 0 4 6 Whitelist MELA-AU 0.62 0.33 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 8 114506234 114928750 1 1 83 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 74.97 0.29 99.7 5 1 2 Whitelist MELA-AU 0.62 0.32 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 9 78230789 78294007 1 1 83 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 74.97 99.87 0 0 3 6 Whitelist MELA-AU 0.62 0.63 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 10 89560707 90127235 1 1 83 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 74.97 0.42 99.41 0 0 2 Whitelist MELA-AU 0.62 0.41 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 11 NA NA 0 0 83 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 12 NA NA 0 0 83 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 13 49768228 96559917 2 2 83 0 0 1 1 0 0.57 0.02 6 0 0 6 5 6 9 5 7 74.97 99.37 0.63 8 2 3 Whitelist MELA-AU 0.68 0.09 0 0 0.64 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 14 NA NA 0 0 83 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 15 40390498 64176832 2 2 83 1 1 0 0 0 0.57 0.08 4 0 0 4 0 3 10 5 5 74.97 95.12 0 0 3 1 Whitelist MELA-AU 0.68 0.23 0 0 0.64 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 16 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 17 11036359 11081315 1 1 83 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 74.97 99.87 0 0 4 NA Whitelist MELA-AU 0.62 0.91 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 18 50813848 50866575 1 1 83 0 0 0 1 0 0.39 1 3 NA 0 NA NA NA NA NA NA 74.97 99.91 0.06 2 4 2 Whitelist MELA-AU 0.62 1 NA 0 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 19 NA NA 0 0 83 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 20 3932781 24526185 1 3 83 1 1 0 0 1 0.57 0.27 2 NA 0 NA NA NA NA NA NA 74.97 99.03 0 3 5 7 Whitelist MELA-AU 0.62 0.51 NA 0 0.64 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 5 0.03 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 21 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 22 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0170 X 11071784 11118121 1 1 83 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 74.97 0.03 99.97 0 2 3 Whitelist MELA-AU 0.62 0.69 NA NA 0.59 1 No MELA-AU MELA-0170 MELA 0.66 3.36 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577113_C_A,CN:4 3 MELA-AU DO220880 MELA-0170 male deceased C43.7 surgery unknown 65 3743 3743 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 123.12 MELA-AU::MELA-0173 1 25529447 175387816 1 7 90 3 0 2 0 2 0.14 0.43 9 0 0 9 3 4 12 3 3 72.56 92.32 7.67 42 3 2 Whitelist MELA-AU 0.68 0.68 0 0 0.59 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 12 0.07 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 2 75423552 227488537 2 8 90 1 1 0 0 6 0.57 0.01 2 0 0 NA NA NA 13 4 7 72.56 84.18 15.73 35 2 3 Whitelist MELA-AU 0.62 0.05 0 0 0.64 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 10 0.06 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 3 15384597 167079288 1 5 90 2 2 0 0 1 0.26 0.41 4 0 0 4 3 4 9 3 5 72.56 96.41 0.44 64 3 4 Whitelist MELA-AU 0.62 0.66 0 0 0.59 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 9 0.05 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 4 64569989 151044347 1 5 90 1 1 1 0 2 0.8 0.05 9 0 0 9 3 6 12 3 3 72.56 83 16.99 55 3 4 Whitelist MELA-AU 0.93 0.17 0 0 0.84 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 8 0.04 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 5 59039035 141391360 1 2 90 1 1 0 0 0 0.57 0.38 2 0 0 NA NA NA 5 4 4 72.56 72.12 25.19 14 2 3 Whitelist MELA-AU 0.68 0.63 0 0 0.64 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 4 0.02 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 6 NA NA 0 0 90 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.63 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 7 65868612 77895002 1 2 90 2 0 0 0 0 0.11 1 4 0 0 4 4 4 9 5 5 72.56 97.41 0 31 3 4 Whitelist MELA-AU 0.54 1 0 0 0.48 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 4 0.02 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 8 85599400 118154159 1 2 90 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 4 4 4 72.56 99.99 0 82 3 4 Whitelist MELA-AU 0.54 1 0 0 0.48 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 4 0.02 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 9 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 10 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 11 3704575 62302551 1 5 90 2 0 1 1 1 0.57 0.2 4 0 0 4 0 4 5 3 5 72.56 96.43 0.07 15 3 2 Whitelist MELA-AU 0.62 0.42 0 0 0.64 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 9 0.05 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 12 NA NA 0 0 90 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.95 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 13 NA NA 0 0 90 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.93 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 14 104480711 104991800 1 1 90 0 0 0 1 0 0.39 0.76 1 NA NA NA NA NA 12 10 10 72.56 34.74 49.47 0 3 NA Whitelist MELA-AU 0.62 0.93 NA NA 0.59 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 15 49713725 96355825 18 21 90 5 3 5 5 3 0.88 0 31 0 0 31 6 8 40 6 6 72.56 63.44 36.45 0 2 6 Whitelist MELA-AU 0.76 0 0 0 0.91 0 Low confidence MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma With other complex events 39 0.22 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 16 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.91 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 17 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 19 NA NA 0 0 90 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 20 60639827 60652582 1 1 90 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 4 72.56 52.69 40.29 1 3 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 22 20888231 21393514 1 2 90 0 1 1 0 0 0.57 0.02 3 0 0 NA NA NA 10 6 6 72.56 100 0 0 4 5 Whitelist MELA-AU 0.68 0.09 0 0 0.64 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 4 0.02 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0173 X NA NA 0 0 90 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.58 NA NA NA 0 No MELA-AU MELA-0173 MELA 0.25 3.01 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 3 MELA-AU DO220881 MELA-0173 male alive C43.6 surgery unknown 59 5590 5590 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 183.88 MELA-AU::MELA-0174 1 197824365 205429191 3 6 249 2 1 0 0 3 0.3 0.29 3 0 0 NA NA NA 7 3 3 33.28 6.5 93.5 1 2 5 Whitelist MELA-AU 9 0.68 0.53 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma With other complex events 9 0.02 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 2 36739938 238611839 7 47 249 1 4 1 1 40 0.28 0 8 0 0 8 6 8 10 7 7 33.28 98.08 1.8 54 3 5 Whitelist MELA-AU 3_9 0.67 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma After polyploidization 54 0.11 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 3 8169851 171292232 5 18 249 4 0 0 1 13 0.04 0.05 7 0 0 7 7 7 7 7 7 33.28 0.69 99.17 81 2 1 Whitelist MELA-AU 2 0.64 0.15 0 0 0.36 1 High confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma Canonical without polyploidization 23 0.05 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 4 27998062 42002770 1 2 249 0 0 1 0 1 0.39 0.45 1 0 NA NA NA NA NA NA NA 33.28 0 99.97 14 2 NA Whitelist MELA-AU 0.68 0.69 0 NA 0.59 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 3 0.01 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 5 120366559 126309300 4 4 249 1 1 1 1 0 1 0.11 9 0 0 9 8 9 16 9 9 33.28 31.65 68.22 21 1 2 Whitelist MELA-AU 1 0.29 0 0 1 1 Linked to high confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma Canonical without polyploidization 8 0.02 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 6 105912207 113434420 1 6 249 0 1 0 1 4 0.57 0.02 4 0 0 4 3 4 11 3 4 33.28 29.62 70.22 14 3 2 Whitelist MELA-AU 0.93 0.09 0 0 0.64 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 8 0.02 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 7 87240554 151498405 4 10 249 2 2 0 0 6 0.26 0.32 3 0 0 NA NA NA NA NA NA 33.28 20.01 79.75 30 2 1 Whitelist MELA-AU 9 0.62 0.57 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma With other complex events 14 0.03 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 8 72795011 77180231 1 2 249 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 7 4 5 33.28 88.04 8.53 10 4 NA Whitelist MELA-AU 0.68 0.03 0 0 0.64 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 9 2192834 27453601 6 18 249 1 2 1 2 12 0.88 0 14 0 0 14 14 14 22 22 22 33.28 22.74 77.03 6 1 2 Whitelist MELA-AU 5 0.87 0 0 0 0.91 1 High confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma Canonical without polyploidization 24 0.05 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 10 126360059 131638875 2 2 249 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 6 6 6 33.28 32.65 67.18 0 1 2 Whitelist MELA-AU 0.68 0.01 0 0 0.64 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 11 6687228 6953290 1 1 249 0 1 0 0 0 0.39 0.88 2 0 NA NA NA NA 5 3 3 33.28 0.2 99.37 0 2 3 Whitelist MELA-AU 0.62 1 0 NA 0.59 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 12 10466884 68478231 1 15 249 1 1 0 0 13 0.57 0 3 0 0 NA NA NA NA NA NA 33.28 0.64 99.34 27 2 1 Whitelist MELA-AU 3_9 0.73 0 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma With other complex events 17 0.03 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 13 NA NA 0 0 249 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.63 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 14 NA NA 0 0 249 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.99 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 15 NA NA 0 0 249 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0.98 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 16 3461502 4105622 1 2 249 0 0 1 0 1 0.39 0.17 1 0.28 NA NA NA NA NA NA NA 33.28 0 98.93 0 2 NA Whitelist MELA-AU 0.68 0.38 0.28 NA 0.59 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 3 0.01 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 17 NA NA 0 0 249 0 0 0 0 0 NA 0.23 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.47 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 18 24530557 66062748 3 7 249 2 1 0 0 4 0.3 0.11 1 0 0 NA NA NA NA NA NA 33.28 0 99.96 37 2 NA Whitelist MELA-AU 0.77 0.29 0 0 0.59 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 10 0.02 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 19 NA NA 0 0 249 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.2 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 20 NA NA 0 0 249 0 0 0 0 0 NA 0.66 NA 0.08 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 0.08 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 21 19534899 19592563 1 1 249 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 5 5 5 33.28 0.13 75.87 0 1 2 Whitelist MELA-AU 0.62 0.06 0 NA 0.59 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 2 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 22 NA NA 0 0 249 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.77 NA NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0174 X NA NA 0 0 249 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist MELA-AU NA 0.08 0 NA NA 1 No MELA-AU MELA-0174 MELA 0.94 2.15 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220882 MELA-0174 female deceased C43.7 surgery unknown 76 598 598 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.67 MELA-AU::MELA-0179 1 NA NA 0 0 29 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.74 NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 2 190650730 191142887 1 1 29 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 29.48 0.2 99.68 3 2 3 Whitelist MELA-AU 0.62 0.75 NA NA 0.59 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 3 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 5 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 6 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 7 142837246 142853019 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.48 0 99.78 3 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 8 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 9 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 10 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 11 8864401 103152665 2 6 29 2 0 1 1 2 0.57 0 11 0 0 11 7 7 14 8 8 29.48 32.36 67.21 22 3 2 Whitelist MELA-AU 0.68 0 0 0 0.64 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 10 0.17 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 12 8406059 8439385 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.48 0.02 99.89 0 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 15 61337484 77297219 11 11 29 3 2 3 3 0 0.97 0 11 0 0 11 3 9 17 6 14 29.48 84.4 0.06 0 3 2 Whitelist MELA-AU 0.98 0 0 0 0.98 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 22 0.38 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0179 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0179 MELA 0.78 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220883 MELA-0179 male deceased C43.5 surgery unknown 23 2993 2993 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 98.45 MELA-AU::MELA-0180 1 191628974 191641488 1 1 82 1 0 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 32.39 0.3 99.7 0 2 NA Whitelist MELA-AU 0.62 0.44 NA NA 0.59 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 2 77477322 142293928 1 2 82 2 0 0 0 0 0.11 0.32 4 0 0 4 4 4 7 7 7 32.39 0.32 99.57 2 1 2 Whitelist MELA-AU 0.54 0.57 0 0 0.48 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 3 69982386 161141734 1 7 82 3 2 0 0 2 0.14 0.05 7 0 0 7 3 6 8 3 3 32.39 19.33 80.61 4 2 3 Whitelist MELA-AU 0.62 0.15 0 0 0.59 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 12 0.07 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 4 NA NA 0 0 82 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.4 NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 5 62069093 154548483 1 1 82 0 0 1 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 32.39 0 99.86 9 2 NA Whitelist MELA-AU 0.62 0.49 NA NA 0.59 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 6 49957630 85419222 5 5 82 1 1 1 2 0 0.9 0.16 3 0 0 NA NA NA 4 4 4 32.39 40.41 59.35 2 2 1 Whitelist MELA-AU 0.93 0.36 0 0 0.92 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 10 0.06 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 7 21029491 143193771 1 5 82 1 1 0 0 3 0.57 0.45 1 0 0 NA NA NA NA NA NA 32.39 13.19 86.59 10 2 NA Whitelist MELA-AU 0.68 0.7 0 0 0.64 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 7 0.04 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 8 88681630 136602943 3 7 82 1 0 1 1 4 0.8 0 1 0 0 NA NA NA NA NA NA 32.39 100 0 6 3 NA Whitelist MELA-AU 0.96 0.02 0 0 0.84 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 10 0.06 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 9 14181443 99221701 1 3 82 2 0 0 1 0 0.3 1 6 0.06 0 6 4 6 6 4 4 32.39 66.13 33.2 0 1 2 Whitelist MELA-AU 0.62 1 0.06 0 0.59 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 6 0.04 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 10 NA NA 0 0 82 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0.68 0 NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 11 67275408 80004995 16 16 82 2 5 6 3 0 0.48 0 8 0 0 8 7 8 13 8 9 32.39 55.1 41.44 16 3 2 Whitelist MELA-AU 0.68 0 0 0 0.64 1 High confidence MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma Canonical without polyploidization 32 0.2 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 12 34065632 34332926 2 2 82 1 1 0 0 0 0.57 0.11 2 0 0 NA NA NA 9 9 9 32.39 18.42 77.83 0 1 2 Whitelist MELA-AU 0.68 0.28 0 0 0.64 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 13 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 14 37184008 37229872 1 1 82 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 32.39 0.04 84.05 0 2 3 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 16 NA NA 0 0 82 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 17 NA NA 0 0 82 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 18 60103510 61865446 1 2 82 0 1 0 1 0 0.57 1 3 NA 0 NA NA NA 5 3 3 32.39 0.17 99.79 2 2 3 Whitelist MELA-AU 0.68 1 NA 0 0.64 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 19 NA NA 0 0 82 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 20 NA NA 0 0 82 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 22 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0180 X NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0180 MELA 0.39 1.81 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220884 MELA-0180 male deceased C43.5 surgery unknown 23 2800 2800 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 92.11 MELA-AU::MELA-0183 1 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 2 134499950 134640547 1 1 69 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 8 4 4 78.57 61.4 35.92 15 1 4 Whitelist MELA-AU 0.62 0.11 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 3 NA NA 0 0 69 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 4 66055226 171361365 2 7 69 0 1 1 0 5 0.57 0 9 0 0 9 7 9 14 10 10 78.57 27.12 70.4 102 2 4 Whitelist MELA-AU 0.62 0.01 0 0 0.64 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 9 0.07 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 5 93520857 129771402 1 2 69 2 0 0 0 0 0.11 1 1 0 0 NA NA NA 5 3 5 78.57 17.26 80.07 16 2 NA Whitelist MELA-AU 0.54 1 0 0 0.48 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 4 0.03 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 6 89875315 89892879 1 1 69 1 0 0 0 0 0.39 1 1 0.01 NA NA NA NA 8 3 4 78.57 55.46 44.39 14 2 NA Whitelist MELA-AU 0.62 1 0.01 NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 7 70182002 70246565 1 1 69 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA 5 3 3 78.57 93.87 5.91 14 3 5 Whitelist MELA-AU 0.62 0.81 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 8 105436876 136342182 1 2 69 2 0 0 0 0 0.11 0.78 4 0 0 4 3 4 8 7 8 78.57 89.69 10.19 56 4 2 Whitelist MELA-AU 0.54 0.94 0 0 0.48 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 4 0.03 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 9 9364980 10404173 1 2 69 1 1 0 0 0 0.57 0.35 2 0 0 NA NA NA NA NA NA 78.57 99.88 0 0 0 1 Whitelist MELA-AU 0.68 0.6 0 0 0.64 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 4 0.03 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 10 55349122 55399430 1 1 69 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 78.57 96.65 0 8 1 NA Whitelist MELA-AU 0.62 0.63 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 11 23197341 78459029 24 24 69 5 6 6 7 0 0.95 0 40 0 0 40 3 9 43 3 4 78.57 99.57 0 33 4 5 Whitelist MELA-AU 0.97 0 0 0 0.97 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 48 0.35 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 12 67106015 67126347 1 1 69 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA 14 14 14 78.57 99.98 0 8 4 NA Whitelist MELA-AU 0.62 0.63 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 13 NA NA 0 0 69 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 14 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 15 55498146 55552004 1 1 69 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 78.57 99.86 0.14 0 1 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 16 25160600 61414870 2 4 69 2 0 1 1 0 0.57 0.04 3 0 0 NA NA NA 5 3 3 78.57 99.89 0 18 0 1 Whitelist MELA-AU 0.68 0.13 0 0 0.64 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 8 0.06 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 17 67563478 67634795 1 1 69 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 9 3 6 78.57 42.04 57.96 0 1 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 18 27692507 28192167 1 1 69 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 78.57 100 0 1 3 4 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 19 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 20 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 5 6 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 21 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 22 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0183 X 5988146 6000139 1 1 69 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 78.57 100 0 0 1 NA Whitelist MELA-AU 0.62 0.81 NA NA 0.59 0 No MELA-AU MELA-0183 MELA 0.55 2.96 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220885 MELA-0183 male alive C43.5 surgery unknown 71 3978 3978 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 130.86 MELA-AU::MELA-0184 1 172574246 238791801 3 4 394 0 0 2 1 1 0.3 0 3 0 0 NA NA NA 16 5 8 77.07 73.4 26.6 152 4 3 Whitelist MELA-AU 0.68 0 0 0 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 7 0.01 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 2 148716535 148996386 1 1 394 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 77.07 99.79 0.12 0 2 3 Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 3 51997999 52024118 2 2 394 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 6 3 3 77.07 96.81 0 63 4 5 Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 4 NA NA 0 0 394 0 0 0 0 0 NA 0 NA NA NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 5 NA NA 0 0 394 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 6 146653726 147202532 2 2 394 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 9 5 5 77.07 97.08 0 115 3 NA Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 7 128659023 128692778 1 1 394 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 3 7 77.07 99.67 0.11 94 3 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 8 NA NA 0 0 394 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 9 474983 8830179 13 115 394 2 4 3 4 102 0.84 0 62 0 0 62 8 11 94 8 12 77.07 18.26 78.63 14 3 1 Whitelist MELA-AU 17 0.68 0 0 0 0.88 1 High confidence MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma With other complex events 128 0.16 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 10 99739836 99827575 1 1 394 0 0 1 0 0 0.39 0 2 NA NA NA NA NA 4 0 3 77.07 99.82 0 43 3 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 11 51282343 51292971 1 1 394 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 4 77.07 62.74 36.84 0 1 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 12 NA NA 0 0 394 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 13 NA NA 0 0 394 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 14 NA NA 0 0 394 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 15 NA NA 0 0 394 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 16 NA NA 0 0 394 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist MELA-AU NA 0.05 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 17 47916 22130644 190 308 394 49 44 49 48 118 0.95 0 251 0 0 251 8 11 257 8 11 77.07 78.62 16.86 20 2 4 Whitelist MELA-AU 0.8 0 0 0 0.96 1 High confidence MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma With other complex events 498 0.63 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 18 NA NA 0 0 394 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 19 4094024 54712781 1 5 394 2 0 0 1 2 0.3 1 16 0 0 16 4 11 17 4 6 77.07 92.57 0.17 121 3 4 Whitelist MELA-AU 0.62 1 0 0 0.59 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 8 0.01 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 20 6986729 52059844 1 3 394 0 0 0 1 2 0.39 0.16 2 0.02 0 NA NA NA NA NA NA 77.07 87.97 11.06 93 4 6 Whitelist MELA-AU 17 0.87 0.37 0.02 0 0.59 1 Linked to high confidence MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma With other complex events 4 0.01 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 21 NA NA 0 0 394 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.27 NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 22 NA NA 0 0 394 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0184 X NA NA 0 0 394 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0184 MELA 0.39 3.23 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220886 MELA-0184 male alive C43.6 surgery unknown 56 7730 7730 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 254.28 MELA-AU::MELA-0185 1 9803588 9898965 3 3 60 1 2 0 0 0 0.3 0.63 3 0 0 NA NA NA NA NA NA 73.11 100 0 0 4 6 Whitelist MELA-AU 0.62 0.84 0 0 0.59 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 6 0.05 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 2 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 3 NA NA 0 0 60 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.32 NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 4 20520971 115714298 1 3 60 2 0 0 0 1 0.11 0.8 5 NA 0 5 3 5 6 4 4 73.11 38.84 61.03 18 2 0 Whitelist MELA-AU 0.41 0.95 NA 0 0.48 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 5 0.04 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 5 NA NA 0 0 60 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.52 0 NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 6 28353779 66319618 2 8 60 0 1 0 1 6 0.57 0 2 0 0 NA NA NA NA NA NA 73.11 38.73 61.12 24 2 3 Whitelist MELA-AU 0.62 0.02 0 0 0.64 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 10 0.08 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 7 150820995 151117257 1 1 60 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 4 4 73.11 99.78 0 19 5 7 Whitelist MELA-AU 0.62 0.93 NA NA 0.59 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 2 0.02 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 8 12188708 104400984 3 6 60 2 1 0 0 3 0.3 0.13 14 0.04 0 14 11 14 14 11 11 73.11 80.16 19.73 23 4 2 Whitelist MELA-AU 0.62 0.32 0.04 0 0.59 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 9 0.08 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 9 18382271 35495732 4 11 60 1 1 1 1 7 1 0 11 0 0 11 5 11 18 7 7 73.11 5.73 91.71 0 2 4 Whitelist MELA-AU 10 0.87 0 0 0 1 1 Linked to high confidence MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma With other complex events 15 0.12 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 10 17445989 38881097 6 18 60 2 1 1 2 12 0.88 0 18 0 0 18 9 11 20 9 10 73.11 3.23 96.6 0 2 4 Whitelist MELA-AU 9 0.99 0 0 0 0.91 1 High confidence MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma With other complex events 24 0.2 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 11 79559060 79576189 1 1 60 1 0 0 0 0 0.39 0.76 1 NA NA NA NA NA NA NA NA 73.11 99.44 0 0 4 NA Whitelist MELA-AU 0.62 0.92 NA NA 0.59 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 2 0.02 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 12 50886329 76447457 1 2 60 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 73.11 99.92 0 3 4 6 Whitelist MELA-AU 0.68 1 NA 0 0.64 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 4 0.03 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 13 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 14 NA NA 0 0 60 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 15 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 16 52400674 52415592 1 1 60 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 73.11 99.9 0 0 3 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 2 0.02 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 17 NA NA 0 0 60 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.88 NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 19 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 20 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0185 X NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0185 MELA 0.85 3.46 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220887 MELA-0185 female alive C43.5 surgery unknown 57 2495 2495 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 82.07 MELA-AU::MELA-0187 1 52056292 247371287 1 5 313 0 3 0 0 2 0.03 0 14 0 0 14 4 5 16 4 5 60.68 99.63 0.37 0 6 5 Whitelist MELA-AU 0.45 0 0 0 0.33 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 8 0.01 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 2 24288358 24349047 1 1 313 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 0 3 60.68 99.78 0.11 0 1 3 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 3 164372006 183310065 1 2 313 0 0 1 0 1 0.39 0 1 0 NA NA NA NA 8 4 6 60.68 46.97 49.85 0 2 NA Whitelist MELA-AU 0.68 0 0 NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 3 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 4 15040433 183162169 1 5 313 4 1 0 0 0 0.04 0 9 0 0 9 4 9 9 4 4 60.68 99.56 0.24 0 1 2 Whitelist MELA-AU 0.45 0.01 0 0 0.36 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 10 0.02 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 5 NA NA 0 0 313 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 0 NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 6 64985024 128497164 12 20 313 3 3 2 4 8 0.88 0 24 0 0 24 6 14 46 7 21 60.68 38.2 58.65 2 2 3 Whitelist MELA-AU 11 0.86 0 0 0 0.91 0 Low confidence MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma With other complex events 32 0.05 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 7 148358563 148375640 1 1 313 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 60.68 99.78 0 0 4 NA Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 8 142997981 143246944 1 1 313 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 0 3 60.68 67.14 29.44 0 0 6 Whitelist MELA-AU 0.62 0.02 0 NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 9 71769456 71808315 1 1 313 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 3 3 60.68 2.77 94.48 0 2 3 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 10 NA NA 0 0 313 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 11 54893769 126272083 198 218 313 51 52 50 45 20 0.9 0 179 0 0 179 6 12 180 6 8 60.68 44.45 52.08 37 5 13 Whitelist MELA-AU 0.93 0 0 0 0.92 0 Low confidence MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma With other complex events 416 0.66 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 12 100242114 100498950 1 1 313 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 3 3 60.68 59.05 37.21 0 1 2 Whitelist MELA-AU 0.62 0.03 0 NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 13 75071105 75154626 1 1 313 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 60.68 85.85 0 0 3 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 14 38255676 38281287 1 1 313 0 1 0 0 0 0.39 0.01 2 NA 0 NA NA NA 4 4 4 60.68 81.27 2.82 0 2 4 Whitelist MELA-AU 0.62 0.03 NA 0 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 15 NA NA 0 0 313 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.17 NA NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 16 6490492 47081066 1 5 313 2 1 0 0 2 0.3 0.6 6 0 0 6 4 6 10 4 7 60.68 84.89 10.58 0 2 3 Whitelist MELA-AU X 0.62 0.81 0 0 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 8 0.01 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 17 NA NA 0 0 313 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.17 NA NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 18 38344795 67806181 1 3 313 1 2 0 0 0 0.3 0.05 4 0 0 4 3 4 4 3 4 60.68 99.96 0 0 3 4 Whitelist MELA-AU 0.62 0.17 0 0 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 6 0.01 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 19 19062794 19079660 1 1 313 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 10 10 10 60.68 99.83 0 0 3 5 Whitelist MELA-AU 0.62 0.09 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 20 NA NA 0 0 313 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.07 NA NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 21 NA NA 0 0 313 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 22 38138518 38240860 1 1 313 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA 5 5 5 60.68 76.22 0 0 3 5 Whitelist MELA-AU 0.62 0.53 NA NA 0.59 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 2 0 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0187 X 8038697 32020619 1 2 313 2 0 0 0 0 0.11 0 4 0.12 0 4 4 4 7 5 5 60.68 0.78 99.22 0 1 2 Whitelist MELA-AU 0.54 0 0.12 0 0.48 0 No MELA-AU MELA-0187 MELA 0.75 3.27 Skin-Melanoma NA 4 0.01 NA 3 MELA-AU DO220888 MELA-0187 male deceased C43.7 surgery unknown 64 1447 1447 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 47.6 MELA-AU::MELA-0190 1 73534990 73572888 1 1 32 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 32.67 0.02 99.98 0 2 3 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 2 226860382 226888754 1 1 32 1 0 0 0 0 0.39 0.75 1 NA NA NA NA NA NA NA NA 32.67 99.89 0 0 1 NA Whitelist MELA-AU 0.62 0.92 NA NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 3 162687582 162712959 1 1 32 0 0 1 0 0 0.39 0.28 2 0 NA NA NA NA NA NA NA 32.67 0.01 99.94 20 1 2 Whitelist MELA-AU 0.62 0.52 0 NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 4 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 5 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 6 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 7 4810305 4875222 1 1 32 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 5 3 3 32.67 0.49 99.28 0 1 2 Whitelist MELA-AU 0.62 0.49 NA NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 8 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 9 NA NA 0 0 32 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.32 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 11 110468193 110504344 1 1 32 0 0 0 1 0 0.39 0 1 0 NA NA NA NA NA NA NA 32.67 0 99.44 12 2 NA Whitelist MELA-AU 0.62 0 0 NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 12 90076749 91886458 1 1 32 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 32.67 1.35 98.57 10 1 2 Whitelist MELA-AU 0.62 0.41 NA NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 14 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 15 NA NA 0 0 32 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0.45 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 17 52587741 52626354 2 2 32 1 0 0 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 32.67 99.98 0 0 1 NA Whitelist MELA-AU 0.68 0.05 0 0 0.64 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 18 54484480 54606861 1 1 32 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 32.67 0.16 99.81 9 1 2 Whitelist MELA-AU 0.62 0.8 NA NA 0.59 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 20 NA NA 0 0 32 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.03 NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0190 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0190 MELA 0.94 1.65 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220889 MELA-0190 male deceased C43.3 surgery unknown 27 486 486 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 15.99 MELA-AU::MELA-0192 1 191125392 239350321 1 5 55 0 2 0 1 2 0.3 0.2 1 0 0 NA NA NA 5 3 3 74.58 99.56 0.44 25 7 NA Whitelist MELA-AU 0.93 0.42 0 0 0.59 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 8 0.07 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 2 47282655 236282398 1 2 55 1 0 1 0 0 0.57 0.63 7 0 0 7 5 7 11 9 11 74.58 99.88 0.01 76 4 3 Whitelist MELA-AU 0.68 0.84 0 0 0.64 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 3 85959308 196912433 1 5 55 0 2 0 0 3 0.11 0 7 0 0 7 0 4 8 0 4 74.58 59.38 37.56 54 4 6 Whitelist MELA-AU 0.62 0.02 0 0 0.48 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 7 0.06 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 4 NA NA 0 0 55 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.4 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 5 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 6 149346245 167477586 1 2 55 1 0 0 1 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 74.58 89.24 10.6 24 2 3 Whitelist MELA-AU 0.68 0.93 NA 0 0.64 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 7 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 8 111185999 146224798 1 2 55 0 2 0 0 0 0.11 0.02 3 0 0 NA NA NA 8 4 4 74.58 67.74 28.75 20 5 4 Whitelist MELA-AU 0.54 0.08 0 0 0.48 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 9 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 11 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 12 NA NA 0 0 55 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.91 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 13 NA NA 0 0 55 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.69 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 14 95206200 95259906 1 1 55 0 1 0 0 0 0.39 0.69 2 NA 0 NA NA NA 6 4 6 74.58 0.93 98.15 0 2 3 Whitelist MELA-AU 0.62 0.89 NA 0 0.59 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 2 0.02 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 16 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 17 21439536 76168266 1 2 55 1 1 0 0 0 0.57 0.06 5 0.01 0 5 3 5 8 3 3 74.58 71.52 23.15 7 3 4 Whitelist MELA-AU 0.68 0.19 0.01 0 0.64 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 4 0.04 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 18 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 19 3536954 10371253 3 3 55 0 1 1 1 0 0.8 0 4 0 0 4 0 3 16 8 8 74.58 94.95 4.87 0 1 2 Whitelist MELA-AU 0.87 0 0 0 0.84 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 6 0.05 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 20 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA 11 11 11 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 21 NA NA 0 0 55 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.34 NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0192 X 62938682 74484110 10 10 55 2 1 2 5 0 0.31 0 11 0 0 11 5 5 11 5 5 74.58 0.71 96.13 0 2 1 Whitelist MELA-AU 0.62 0 0 0 0.59 0 Low confidence MELA-AU MELA-0192 MELA 0.75 3.28 Skin-Melanoma With other complex events 20 0.18 NA 3 MELA-AU DO220890 MELA-0192 male deceased C43.6 surgery unknown 63 664 664 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 21.84 MELA-AU::MELA-0193 1 29465201 244012995 1 7 264 3 1 1 0 2 0.28 0.05 15 0 0 15 7 9 17 7 7 78.71 99.93 0.07 541 4 3 Whitelist MELA-AU 0.77 0.16 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 12 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 2 49491100 50991842 3 3 264 2 1 0 0 0 0.3 0.04 8 0 0 8 5 8 19 5 5 78.71 99.87 0 0 4 3 Whitelist MELA-AU 0.62 0.15 0 0 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 3 37537435 116274323 1 4 264 3 1 0 0 0 0.11 0.07 9 0 0 9 7 9 11 7 7 78.71 99.97 0 334 4 3 Whitelist MELA-AU 0.54 0.21 0 0 0.48 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 4 33369751 124655932 1 7 264 1 4 0 0 2 0.04 0.03 8 0 0 8 5 8 9 5 9 78.71 99.99 0 401 4 5 Whitelist MELA-AU 0.41 0.12 0 0 0.36 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 12 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 5 29307315 123070542 1 4 264 3 1 0 0 0 0.11 0 8 0 0 8 5 8 9 5 5 78.71 99.8 0.07 323 3 2 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 6 548107 82083993 26 46 264 6 9 6 5 20 0.71 0 59 0 0 59 8 17 61 8 11 78.71 16.41 80.42 103 2 3 Whitelist MELA-AU 0.76 0 0 0 0.79 1 High confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 72 0.14 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 7 33423213 146680403 1 5 264 3 2 0 0 0 0.14 0.05 28 0 0 28 5 7 33 6 12 78.71 97.43 0 427 6 4 Whitelist MELA-AU 0.62 0.17 0 0 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 10 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 8 22281476 139970636 1 6 264 5 1 0 0 0 0.01 0.03 8 0 0 8 3 5 9 3 5 78.71 95.97 0 122 4 3 Whitelist MELA-AU 0.25 0.12 0 0 0.19 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 12 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 9 9585557 133030836 1 16 264 3 1 0 0 12 0.11 0 23 0 0 23 4 8 27 4 6 78.71 63.12 25 210 4 2 Whitelist MELA-AU 6 0.95 0 0 0 0.48 1 Linked to high confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 20 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 10 30820501 126269132 1 7 264 4 3 0 0 0 0.06 0.56 15 0 0 15 10 12 22 11 13 78.71 96.65 0 320 6 5 Whitelist MELA-AU 0.54 0.78 0 0 0.48 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 14 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 11 4690426 90534996 19 46 264 9 3 3 4 27 0.16 0 75 0 0 75 10 12 84 11 12 78.71 95.41 4.04 212 6 4 Whitelist MELA-AU 1 0.68 0 0 0 0.59 1 High confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 65 0.12 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 12 30161467 133173511 11 28 264 2 3 2 4 17 0.8 0 31 0 0 31 5 6 57 10 12 78.71 79.53 19.88 243 4 2 Whitelist MELA-AU 11_19_3 0.68 0 0 0 0.84 1 Low confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 39 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 13 97198939 97838624 1 1 264 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 7 3 3 78.71 85.85 0 39 5 8 Whitelist MELA-AU 0.62 0.47 0 NA 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 14 NA NA 0 0 264 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 15 53455177 53568943 1 1 264 0 1 0 0 0 0.39 0.57 2 0 NA NA NA NA 6 3 4 78.71 84.5 0 0 4 5 Whitelist MELA-AU 0.62 0.79 0 NA 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 16 4711643 78632974 1 4 264 3 1 0 0 0 0.11 0.34 7 0 0 7 4 6 9 4 7 78.71 83.84 16.03 164 4 2 Whitelist MELA-AU 0.54 0.59 0 0 0.48 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 17 20194021 60802967 2 7 264 0 1 2 1 3 0.57 0.25 12 0 0 12 3 5 16 3 3 78.71 68.05 27.33 87 8 6 Whitelist MELA-AU 6 0.68 0.5 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 11 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 18 24275840 24332802 1 1 264 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 9 7 7 78.71 94.13 0 0 4 6 Whitelist MELA-AU 0.62 0.05 NA NA 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 19 5218983 35407313 1 3 264 1 1 0 1 0 0.8 0.37 11 0 0 11 5 5 15 7 7 78.71 87.4 5.32 59 5 6 Whitelist MELA-AU 0.87 0.62 0 0 0.84 1 Linked to low confidence MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma With other complex events 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 20 14805187 14986561 1 1 264 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 15 3 7 78.71 92.79 0 18 5 8 Whitelist MELA-AU 0.62 0.87 NA NA 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 21 29501877 34778599 1 2 264 1 1 0 0 0 0.57 0.26 4 0 0 4 3 4 5 3 3 78.71 0.45 76.9 0 2 1 Whitelist MELA-AU 0.68 0.51 0 0 0.64 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 22 20963512 29871112 1 2 264 1 1 0 0 0 0.57 0.78 3 NA 0 NA NA NA 5 3 5 78.71 73.94 2.28 0 4 2 Whitelist MELA-AU 0.68 0.93 NA 0 0.64 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0193 X 80706936 80734844 1 1 264 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 78.71 0.02 99.98 0 1 2 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0193 MELA 0.9 4.07 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 4 MELA-AU DO220891 MELA-0193 male alive C43.5 surgery unknown 78 1324 1324 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 43.55 MELA-AU::MELA-0196 1 NA NA 0 0 101 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.02 NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 2 38033476 88438303 59 68 101 15 17 11 16 9 0.7 0 84 0 0 84 6 12 88 6 9 40.17 35.66 64.25 14 3 5 Whitelist MELA-AU 0.91 0 0 0 0.78 0 Low confidence MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma With other complex events 127 0.63 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 3 79245466 79268587 1 1 101 0 0 1 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 40.17 0.01 99.96 0 1 2 Whitelist MELA-AU 0.62 0.16 NA NA 0.59 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 4 NA NA 0 0 101 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.06 NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 5 NA NA 0 0 101 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA 11 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.34 0 NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 6 85131484 85404608 1 1 101 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 5 5 40.17 0.36 99.5 0 1 2 Whitelist MELA-AU 0.62 0.26 NA NA 0.59 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 7 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 8 NA NA 0 0 101 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.49 NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 9 21914593 22603866 1 1 101 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 40.17 99.3 0 0 0 1 Whitelist MELA-AU 0.62 0.41 NA NA 0.59 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 10 89398267 90250889 1 1 101 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 40.17 99.82 0 0 1 NA Whitelist MELA-AU 0.62 0.26 NA NA 0.59 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 11 NA NA 0 0 101 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.26 NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 12 NA NA 0 0 101 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.26 NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 13 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 14 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 15 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 16 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 17 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 18 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 19 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 20 3446456 18379473 5 15 101 3 1 1 0 10 0.28 0 16 0 0 16 3 16 19 4 4 40.17 66.04 26.85 2 3 2 Whitelist MELA-AU 2 0.85 0 0 0 0.59 0 Linked to low confidence MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma With other complex events 20 0.1 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 21 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 22 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0196 X NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0196 MELA 0.73 1.88 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220892 MELA-0196 male deceased C43.5 surgery unknown 53 5325 5325 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 175.16 MELA-AU::MELA-0197 1 82264384 248810873 1 2 42 0 1 0 1 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 19.51 0.02 99.8 8 2 3 Whitelist MELA-AU 0.68 0.93 NA 0 0.64 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 2 16816465 243023954 1 3 42 1 2 0 0 0 0.3 1 3 0 0 NA NA NA NA NA NA 19.51 0.05 99.87 22 2 3 Whitelist MELA-AU 0.62 1 0 0 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 3 1314541 195082578 1 3 42 2 1 0 0 0 0.3 1 4 0.05 0 4 3 4 5 3 3 19.51 0.2 99.66 14 2 1 Whitelist MELA-AU 0.62 1 0.05 0 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 4 83765906 188575640 1 5 42 2 1 0 0 2 0.3 0.2 11 0 0 11 6 11 12 6 6 19.51 5.02 94.87 10 2 3 Whitelist MELA-AU 0.93 0.43 0 0 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 8 0.1 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 5 169314436 172864852 1 1 42 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.51 97.88 1.96 0 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 6 20862898 20948380 1 1 42 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 3 19.51 44.74 55.12 0 2 3 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 7 96048582 100246910 1 3 42 0 3 0 0 0 0.03 0.29 2 0 0 NA NA NA NA NA NA 19.51 0.03 99.76 2 2 3 Whitelist MELA-AU 0.41 0.53 0 0 0.33 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 8 97813675 97926972 1 1 42 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 19.51 0 99.9 5 2 NA Whitelist MELA-AU 0.62 0.9 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 9 21328315 26614215 1 1 42 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.51 99.3 0 0 0 1 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 10 69696158 69762157 1 1 42 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.51 0 99.82 2 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 11 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 12 24447475 95984721 1 2 42 0 1 0 1 0 0.57 0.01 3 0 0 NA NA NA NA NA NA 19.51 0.01 99.9 8 2 3 Whitelist MELA-AU 0.68 0.06 0 0 0.64 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 13 91980585 92010876 1 1 42 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.51 0.03 99.97 1 2 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 14 30358236 30932543 1 1 42 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.51 99.09 0 0 1 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 15 33191664 57351462 1 2 42 1 1 0 0 0 0.57 0.33 2 NA 0 NA NA NA NA NA NA 19.51 0.24 99.63 0 2 3 Whitelist MELA-AU 0.68 0.58 NA 0 0.64 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 16 34483267 34841004 1 1 42 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 5 0 3 19.51 60.12 35.35 2 1 3 Whitelist MELA-AU 0.62 0.27 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 17 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 18 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 20 NA NA 0 0 42 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 21 40707706 40754270 1 1 42 0 1 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 19.51 0.1 77.26 0 2 3 Whitelist MELA-AU 0.62 0.65 NA NA 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 22 17567869 49040917 1 3 42 1 2 0 0 0 0.3 0.01 5 0 0 5 5 5 5 5 5 19.51 3.4 96.6 0 2 3 Whitelist MELA-AU 0.62 0.06 0 0 0.59 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 6 0.07 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0197 X 15451283 151959997 1 2 42 0 1 1 0 0 0.57 0.47 2 0.04 0 NA NA NA NA NA NA 19.51 0.04 99.74 8 2 3 Whitelist MELA-AU 0.68 0.71 0.04 0 0.64 0 No MELA-AU MELA-0197 MELA 0.93 1.8 Skin-Melanoma NA 4 0.05 NA 2 MELA-AU DO220893 MELA-0197 female alive C43.5 surgery unknown 56 310 310 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 10.2 MELA-AU::MELA-0200 1 116310351 117139166 2 2 55 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 6 6 6 23.72 10.99 88.75 0 1 2 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 2 199536019 199556334 1 1 55 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 23.72 0 99.88 1 2 NA Whitelist MELA-AU 0.62 0.24 NA NA 0.59 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 3 150727667 150775839 1 1 55 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 14 9 13 23.72 99.85 0.02 7 2 3 Whitelist MELA-AU 0.62 0.69 NA NA 0.59 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 4 183170217 183258119 1 1 55 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 23.72 1.3 98.47 4 2 NA Whitelist MELA-AU 0.62 0.81 NA NA 0.59 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 5 NA NA 0 0 55 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 6 NA NA 0 0 55 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.5 NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 7 22301099 22328745 1 1 55 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 5 4 5 23.72 54.92 44.88 0 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 8 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 9 13186614 35103688 19 23 55 4 7 4 4 4 0.7 0 14 0 0 14 8 8 22 10 11 23.72 34.15 62.74 4 2 1 Whitelist MELA-AU 0.9 0 0 0 0.78 1 High confidence MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma With other complex events 42 0.38 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 11 68282669 68411441 1 1 55 0 1 0 0 0 0.39 0.11 1 0 NA NA NA NA 6 3 6 23.72 56.42 39.98 3 1 NA Whitelist MELA-AU 0.62 0.29 0 NA 0.59 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 12 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 13 80950734 83476401 1 2 55 1 1 0 0 0 0.57 0.71 1 NA 0 NA NA NA NA NA NA 23.72 0 85.85 4 2 NA Whitelist MELA-AU 0.68 0.9 NA 0 0.64 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 14 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 16 77663385 89919100 2 2 55 0 0 1 1 0 0.57 0.18 4 0 0 4 0 3 10 5 9 23.72 79.55 14.59 4 1 2 Whitelist MELA-AU 0.68 0.4 0 0 0.64 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 18 NA NA 0 0 55 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 20 11716285 23783938 1 2 55 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA 4 4 4 23.72 83.7 9.27 6 3 NA Whitelist MELA-AU 0.68 0.11 0 0 0.64 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 4 0.04 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0200 X NA NA 0 0 55 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0200 MELA 0.26 2.04 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220894 MELA-0200 male alive C43.6 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 0 NA MELA-AU::MELA-0202 1 201306642 201612223 1 1 103 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 23.8 0.12 96.85 0 2 3 Whitelist MELA-AU 0.62 0.03 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 2 58507347 58584349 1 1 103 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.8 0 99.91 9 2 NA Whitelist MELA-AU 0.62 0.01 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 3 178116855 184230560 2 2 103 0 0 1 1 0 0.57 1 4 0 0 4 4 4 10 10 10 23.8 38.77 61.18 20 1 2 Whitelist MELA-AU 0.68 1 0 0 0.64 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 4 NA NA 0 0 103 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.58 NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 5 73961710 74027347 1 1 103 0 1 0 0 0 0.39 0.07 1 NA 0 NA NA NA NA NA NA 23.8 0 99.88 20 2 NA Whitelist MELA-AU 0.62 0.2 NA 0 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 6 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 7 6051022 155559216 42 42 103 10 12 11 9 0 0.92 0 44 0 0 44 5 9 44 5 9 23.8 13.07 86.71 87 2 3 Whitelist MELA-AU 0.96 0 0 0 0.94 0 Low confidence MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma With other complex events 84 0.41 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 8 NA NA 0 0 103 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.2 NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 9 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 10 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 11 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 12 45563536 131298099 5 6 103 0 1 2 2 1 0.53 0.15 3 0 0 NA NA NA 5 5 5 23.8 10.53 89.39 31 2 1 Whitelist MELA-AU 0.68 0.36 0 0 0.64 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 11 0.05 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 13 93854958 93894291 1 1 103 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 23.8 0 85.85 25 2 NA Whitelist MELA-AU 0.62 0.51 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 14 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 15 95193254 102265311 25 28 103 7 6 5 7 3 0.93 0 12 0 0 12 3 3 14 3 3 23.8 5.91 78.39 21 2 3 Whitelist MELA-AU 0.9 0 0 0 0.95 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 53 0.26 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 16 64074915 64217919 1 1 103 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 23.8 0.16 99.75 11 2 3 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 17 9526271 53615001 1 1 103 0 0 1 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 23.8 100 0 2 1 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 18 20286752 20316144 1 1 103 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 23.8 2.51 97.45 0 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 19 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 20 30358532 30407155 1 1 103 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 23.8 0.08 98.95 8 2 3 Whitelist MELA-AU 0.62 0.91 NA NA 0.59 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 21 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 22 NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0202 X NA NA 0 0 103 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0202 MELA 0.73 1.84 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578259_C_A,CN:1 2 MELA-AU DO220895 MELA-0202 male alive C43.7 surgery unknown 50 3377 3377 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 111.09 MELA-AU::MELA-0203 1 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 2 215864158 217276541 3 5 44 0 0 2 1 2 0.3 0.42 1 0 0 NA NA NA NA NA NA 14.04 0 99.91 5 2 NA Whitelist MELA-AU 6 0.68 0.66 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma With other complex events 8 0.09 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 3 NA NA 0 0 44 0 0 0 0 0 NA 0.23 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.47 0 NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 4 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 5 NA NA 0 0 44 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 6 44528437 168230895 21 23 44 5 6 5 5 2 0.99 0 14 0 0 14 11 14 14 11 11 14.04 46.22 50.95 12 2 1 Whitelist MELA-AU 0.86 0 0 0 1 1 High confidence MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma Canonical without polyploidization 44 0.5 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 8 NA NA 0 0 44 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 9 NA NA 0 0 44 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.49 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 10 112411788 112729838 1 1 44 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.04 0.23 99.59 2 2 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 11 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 12 NA NA 0 0 44 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 16 6950051 6983094 1 1 44 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 14.04 0.04 99.85 0 2 3 Whitelist MELA-AU 0.62 0.58 NA NA 0.59 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 18 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 19 16928241 17560869 1 1 44 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 14.04 1.07 98.76 0 1 2 Whitelist MELA-AU 0.62 0.81 NA NA 0.59 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 2 0.02 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 20 NA NA 0 0 44 0 0 0 0 0 NA 0.62 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.83 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0203 X NA NA 0 0 44 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0203 MELA 0.98 1.96 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220896 MELA-0203 female alive C43.6 70 3735 3735 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 122.86 MELA-AU::MELA-0205 1 156153339 234867809 1 6 33 1 0 2 2 1 0.53 0.01 13 0 0 13 5 5 15 5 5 23.09 34.13 62.9 0 3 4 Whitelist MELA-AU 0.62 0.06 0 0 0.64 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 11 0.17 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 2 NA NA 0 0 33 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.92 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 3 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 4 181041877 181669582 1 1 33 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 23.09 0.33 99.66 1 1 2 Whitelist MELA-AU 0.62 0.9 NA NA 0.59 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 5 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 6 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 7 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 8 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 9 11612380 31055136 14 14 33 4 3 3 4 0 0.96 0 28 0 0 28 5 8 32 6 8 23.09 29.33 68.07 10 4 0 Whitelist MELA-AU 0.98 0 0 0 0.98 0 Low confidence MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma With other complex events 28 0.42 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 10 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 11 NA NA 0 0 33 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 15 33333012 33382213 1 1 33 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 23.09 0.05 84.54 0 1 2 Whitelist MELA-AU 0.62 0.82 NA NA 0.59 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 20 NA NA 0 0 33 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.75 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 22 NA NA 0 0 33 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.58 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0205 X NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0205 MELA 0.24 1.97 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220897 MELA-0205 male alive C43.6 surgery unknown 38 2235 2235 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 73.52 MELA-AU::MELA-0213 1 9357524 242597382 1 3 34 1 1 1 0 0 0.8 0.75 5 0.77 0 5 3 5 6 3 3 81.9 90.57 0 25 3 5 Whitelist MELA-AU 0.87 0.91 0.77 0 0.84 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 6 0.09 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 2 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 3 38707102 56337006 6 6 34 3 1 1 1 0 0.57 0.01 7 0 0 7 0 3 10 3 3 81.9 96.96 0 4 3 4 Whitelist MELA-AU 0.68 0.04 0 0 0.64 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 12 0.18 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 4 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 5 54672003 54686956 1 1 34 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 5 3 4 81.9 97.32 0.01 19 2 3 Whitelist MELA-AU 0.62 0.71 NA NA 0.59 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 2 0.03 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 6 NA NA 0 0 34 0 0 0 0 0 NA 0.05 NA 0.06 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.17 0.06 NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 7 64047434 68000469 2 3 34 0 1 0 1 1 0.57 0.01 5 0 0 5 0 4 9 0 3 81.9 96.26 1.3 6 3 4 Whitelist MELA-AU 0.62 0.04 0 0 0.64 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 5 0.07 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 8 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 9 17985202 118846639 1 3 34 0 0 1 1 1 0.57 0.15 6 NA 0 6 5 6 6 5 6 81.9 79.84 3.29 4 3 2 Whitelist MELA-AU 0.62 0.35 NA 0 0.64 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 5 0.07 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 10 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 12 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 13 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 20 NA NA 0 0 34 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.38 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 21 NA NA 0 0 34 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.59 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 22 19600873 50879547 6 6 34 1 2 0 3 0 0.34 0 10 0 0 10 5 6 10 5 6 81.9 64.26 0 2 5 4 Whitelist MELA-AU 0.62 0 0 0 0.59 0 Low confidence MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma With other complex events 12 0.18 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0213 X NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0213 MELA 0.15 3.66 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220898 MELA-0213 female alive C43.9 surgery unknown 63 2307 2307 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 75.89 MELA-AU::MELA-0223 1 6186890 209762122 1 6 104 5 1 0 0 0 0.01 0.58 8 0 0 8 3 7 9 3 3 79.19 99.98 0.02 255 4 2 Whitelist MELA-AU 0.25 0.81 0 0 0.19 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 12 0.06 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 2 75906034 75992265 1 1 104 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 79.19 99.9 0 8 4 NA Whitelist MELA-AU 0.62 0.05 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 3 116663457 116737845 1 1 104 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 79.19 99.97 0 51 3 4 Whitelist MELA-AU 0.62 0.12 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 4 128037797 154185050 1 2 104 1 1 0 0 0 0.57 0.33 4 0 0 4 3 4 5 3 3 79.19 99.89 0.02 112 4 2 Whitelist MELA-AU 0.68 0.58 0 0 0.64 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 4 0.02 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 5 12735810 93203342 1 2 104 1 1 0 0 0 0.57 0.22 4 0.04 0 4 3 4 6 3 5 79.19 97.22 0 283 5 6 Whitelist MELA-AU 0.68 0.45 0.04 0 0.64 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 4 0.02 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 6 53940949 143661562 8 10 104 3 1 2 2 2 0.8 0.01 14 0 0 14 4 5 18 4 5 79.19 94.07 3.1 322 3 2 Whitelist MELA-AU 0.86 0.03 0 0 0.84 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 18 0.09 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 7 45538984 55417533 9 9 104 2 3 3 1 0 0.75 0 12 0 0 12 3 5 15 3 6 79.19 99.76 0 58 4 3 Whitelist MELA-AU 0.85 0.01 0 0 0.83 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 18 0.09 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 8 NA NA 0 0 104 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.2 NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 9 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 10 80739699 81664549 1 1 104 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 79.19 0.68 99.14 0 0 2 Whitelist MELA-AU 0.62 0.26 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 11 NA NA 0 0 104 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 12 58230888 117732424 13 13 104 3 2 3 5 0 0.69 0 23 0 0 23 3 3 32 5 5 79.19 27.69 68.57 35 2 87 Whitelist MELA-AU 0.8 0 0 0 0.77 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 26 0.12 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 13 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 14 41049727 41091048 1 1 104 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 5 3 3 79.19 2.15 96.93 0 0 2 Whitelist MELA-AU 0.62 0.63 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 15 23923594 38663634 1 2 104 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 79.19 0.48 99.42 0 2 0 Whitelist MELA-AU 0.68 1 NA 0 0.64 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 4 0.02 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 16 NA NA 0 0 104 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 17 1265733 61914066 1 3 104 3 0 0 0 0 0.03 0.37 4 0 0 4 3 4 4 3 4 79.19 99.98 0 65 7 4 Whitelist MELA-AU 0.41 0.62 0 0 0.33 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 6 0.03 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 18 49383972 49409250 1 1 104 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 79.19 99.96 0 63 5 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 19 NA NA 0 0 104 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.71 NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 20 264096 23474579 10 14 104 4 2 3 1 4 0.57 0 24 0 0 24 4 4 26 4 4 79.19 65.75 27.19 12 2 6 Whitelist MELA-AU 0.62 0 0 0 0.64 1 Low confidence MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma With other complex events 24 0.12 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 21 42101937 43633040 1 1 104 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 7 3 3 79.19 65.97 11.76 8 2 4 Whitelist MELA-AU 0.62 0.14 NA NA 0.59 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 2 0.01 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 22 25575062 40335606 5 12 104 1 2 1 1 7 0.9 0 11 0 0 11 11 11 13 13 13 79.19 92.15 7.85 0 2 3 Whitelist MELA-AU 0.68 0 0 0 0.92 1 High confidence MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma Canonical without polyploidization 17 0.08 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0223 X NA NA 0 0 104 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.4 NA NA NA 1 No MELA-AU MELA-0223 MELA 0.87 4.03 Skin-Melanoma NA 0 0 NA 388 MELA-AU DO220899 MELA-0223 female deceased C43.6 surgery unknown 52 10274 10274 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 337.96 MELA-AU::MELA-0226 1 1241726 1609353 1 2 152 1 0 0 1 0 0.57 0.03 1 0 0 NA NA NA 5 5 5 29.65 0.18 99.82 0 3 NA Whitelist MELA-AU 0.68 0.12 0 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 2 63961817 242840296 1 7 152 1 5 0 1 0 0.04 0.56 14 0 0 14 6 14 16 7 7 29.65 9.22 90.66 25 2 3 Whitelist MELA-AU 0.47 0.78 0 0 0.38 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 14 0.05 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 3 62238449 197705084 1 3 152 2 1 0 0 0 0.3 0.04 6 0 0 6 5 6 7 5 5 29.65 0.23 99.58 20 2 3 Whitelist MELA-AU 0.62 0.13 0 0 0.59 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 6 0.02 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 4 34615318 61241184 1 2 152 1 1 0 0 0 0.57 0 4 NA 0 4 3 4 5 3 3 29.65 0.5 96.92 10 2 0 Whitelist MELA-AU 0.68 0.02 NA 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 5 27992541 29521012 1 4 152 3 1 0 0 0 0.11 0.06 6 0 0 6 5 6 7 5 5 29.65 0.42 99.43 13 2 1 Whitelist MELA-AU 0.54 0.2 0 0 0.48 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 8 0.03 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 6 34831694 35041927 2 2 152 0 0 1 1 0 0.57 0.39 1 0 0 NA NA NA NA NA NA 29.65 10.32 89.54 0 2 NA Whitelist MELA-AU 0.68 0.64 0 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 7 123055563 158071677 32 43 152 5 10 10 7 11 0.52 0 42 0 0 42 17 42 50 17 17 29.65 46.37 53.41 23 2 3 Whitelist MELA-AU 14 0.65 0 0 0 0.64 1 High confidence MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma With other complex events 75 0.25 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 8 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA 13 11 13 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 9 134110740 134423050 2 2 152 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 10 5 8 29.65 36.05 63.26 0 2 3 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 10 89619388 134966688 1 3 152 1 0 0 2 0 0.3 0.85 10 0 0 10 8 10 19 8 8 29.65 84.28 15.54 0 1 2 Whitelist MELA-AU 0.62 0.98 0 0 0.59 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 6 0.02 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 11 2979632 83289483 13 13 152 4 1 4 4 0 0.56 0 11 0 0 11 6 11 16 6 8 29.65 74.89 24.69 6 2 1 Whitelist MELA-AU 0.68 0 0 0 0.64 1 Low confidence MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma With other complex events 26 0.09 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 12 77977598 78028159 1 1 152 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 29.65 0.04 99.95 2 1 2 Whitelist MELA-AU 0.62 0.17 NA NA 0.59 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 13 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 14 76917881 90636670 11 13 152 3 4 1 3 2 0.63 0 8 0 0 8 5 8 23 11 11 29.65 25.54 74.4 4 2 1 Whitelist MELA-AU 7 0.68 0 0 0 0.71 1 Low confidence MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma Canonical without polyploidization 24 0.08 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 15 59733947 59748844 1 1 152 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 29.65 0.01 99.82 0 1 2 Whitelist MELA-AU 0.62 0.33 NA NA 0.59 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 16 NA NA 0 0 152 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist MELA-AU NA 0.42 NA NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 17 13038455 19403313 4 4 152 0 2 1 1 0 0.57 0.02 8 0 0 8 3 8 10 4 4 29.65 7.73 91.82 0 3 2 Whitelist MELA-AU 0.68 0.09 0 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 8 0.03 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 18 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 19 2020256 14899067 1 2 152 0 0 1 1 0 0.57 0.77 3 NA 0.03 NA NA NA 7 7 7 29.65 31.09 61.32 0 2 1 Whitelist MELA-AU 0.68 0.93 NA 0.03 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 20 NA NA 0 0 152 0 0 0 0 0 NA 0.57 NA 0.03 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.8 0.03 NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 21 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 22 28061073 50538728 1 4 152 0 1 1 2 0 0.57 0.11 10 0 0 10 8 10 11 9 9 29.65 16.02 82.49 0 2 3 Whitelist MELA-AU 0.68 0.28 0 0 0.64 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 8 0.03 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0226 X 76749195 76779486 1 1 152 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 29.65 100 0 0 1 NA Whitelist MELA-AU 0.62 0.04 NA NA 0.59 1 No MELA-AU MELA-0226 MELA 0.48 1.86 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220900 MELA-0226 male deceased C43.9 surgery unknown 39 266 266 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.75 MELA-AU::MELA-0228 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 2 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 4 102302605 102317773 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.65 0.01 99.97 3 1 2 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 5 118500510 175775473 2 2 25 0 1 0 1 0 0.57 0.02 1 0 0 NA NA NA 4 3 4 19.65 71.86 25.47 6 4 NA Whitelist MELA-AU 0.68 0.07 0 0 0.64 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 4 0.08 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 6 39226904 39239080 1 1 25 0 0 1 0 0 0.39 0.02 2 0 0 NA NA NA 8 3 4 19.65 23.01 76.84 1 2 4 Whitelist MELA-AU 0.62 0.06 0 0 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 8 118492530 118512480 1 1 25 0 0 1 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 19.65 0.01 99.98 8 1 2 Whitelist MELA-AU 0.62 0.62 NA NA 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 11 66942280 68429988 1 5 25 1 0 0 0 4 0.39 0.01 5 0 0 5 3 5 5 3 3 19.65 0.53 99.04 5 1 2 Whitelist MELA-AU 0.93 0.03 0 0 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 6 0.12 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 12 78900662 78913645 1 1 25 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 19.65 0 99.92 2 2 NA Whitelist MELA-AU 0.62 0.58 NA NA 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 13 NA NA 0 0 25 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 15 32915788 56033608 1 4 25 2 0 0 0 2 0.11 0 2 0 0 NA NA NA NA NA NA 19.65 99.9 0 2 1 4 Whitelist MELA-AU 0.54 0.02 0 0 0.48 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 6 0.12 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 17 NA NA 0 0 25 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.74 NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 18 NA NA 0 0 25 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.74 NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 20 NA NA 0 0 25 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.27 NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 22 33802392 33957221 1 1 25 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 19.65 0.3 98.81 0 1 2 Whitelist MELA-AU 0.62 0.02 NA NA 0.59 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0228 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0228 MELA 0.69 2.17 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220901 MELA-0228 male alive C43.5 surgery unknown 56 8479 8479 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 278.91 MELA-AU::MELA-0229 1 37731494 37876828 2 2 155 0 0 1 1 0 0.57 0.55 3 0 0 NA NA NA NA NA NA 21.04 0.05 99.23 0 2 3 Whitelist MELA-AU 0.68 0.78 0 0 0.64 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 2 228535426 240227921 4 4 155 2 0 1 1 0 0.57 1 4 0 0 4 4 4 5 5 5 21.04 2.69 97.22 30 1 2 Whitelist MELA-AU 0.68 1 0 0 0.64 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 8 0.03 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 3 39682784 62393971 41 47 155 10 13 11 7 6 0.61 0 11 0 0 11 7 11 17 8 17 21.04 11.1 88.7 88 1 2 Whitelist MELA-AU 0.68 0 0 0 0.68 1 High confidence MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma Canonical without polyploidization 88 0.28 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 4 37054760 185350597 1 8 155 2 1 1 1 3 0.9 0.42 2 0 0 NA NA NA NA NA NA 21.04 0.02 99.95 348 1 2 Whitelist MELA-AU 1 0.67 0 0 0.92 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 13 0.04 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 5 NA NA 0 0 155 0 0 0 0 0 NA 0.62 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.83 0 NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 6 33393980 33408268 1 1 155 1 0 0 0 0 0.39 0.23 1 0 NA NA NA NA NA NA NA 21.04 0 99.77 0 2 NA Whitelist MELA-AU 0.62 0.47 0 NA 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 7 86978956 140869275 1 2 155 1 1 0 0 0 0.57 0.72 1 0 0 NA NA NA NA NA NA 21.04 0 99.97 59 2 NA Whitelist MELA-AU 0.68 0.9 0 0 0.64 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 8 74296849 74309114 1 1 155 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 21.04 0 99.88 106 2 NA Whitelist MELA-AU 0.62 0.34 0 NA 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 9 9156921 26688496 1 1 155 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 4 4 21.04 62.49 37.48 15 1 2 Whitelist MELA-AU 0.62 0.26 NA NA 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 10 94030211 94114982 1 1 155 0 1 0 0 0 0.39 0.33 1 0 NA NA NA NA NA NA NA 21.04 68.56 31.36 0 1 NA Whitelist MELA-AU 0.62 0.58 0 NA 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 11 19529269 81832994 1 2 155 1 0 0 1 0 0.57 0.56 2 0 0 NA NA NA NA NA NA 21.04 0.11 99.74 167 1 2 Whitelist MELA-AU 0.68 0.79 0 0 0.64 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 4 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 12 NA NA 0 0 155 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.17 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 13 65535009 65547315 1 1 155 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 21.04 0 85.85 21 2 NA Whitelist MELA-AU 0.62 0.75 NA NA 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 14 NA NA 0 0 155 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.27 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 15 92525659 101586904 3 3 155 2 1 0 0 0 0.3 0 3 0 0 NA NA NA 8 3 4 21.04 53.44 30.23 0 3 6 Whitelist MELA-AU 0.62 0.01 0 0 0.59 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 6 0.02 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 16 NA NA 0 0 155 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.95 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 17 NA NA 0 0 155 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.7 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 18 NA NA 0 0 155 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.69 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 19 1381097 1832204 2 6 155 0 0 1 1 4 0.57 0 3 0 0 NA NA NA NA NA NA 21.04 2.92 96.89 0 0 1 Whitelist MELA-AU 3 0.62 0.02 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma With other complex events 8 0.03 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 20 NA NA 0 0 155 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 21 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 22 NA NA 0 0 155 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0229 X NA NA 0 0 155 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.42 NA NA NA 1 No MELA-AU MELA-0229 MELA 0.31 1.85 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220902 MELA-0229 male deceased C43.4 surgery unknown 70 595 595 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 19.57 MELA-AU::MELA-0230 1 150957154 156942025 3 12 441 2 0 1 0 9 0.3 0.54 15 0 0 15 4 5 43 9 9 89.79 96.88 0.09 3 6 5 Whitelist MELA-AU 4 0.83 0.77 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma With other complex events 15 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 2 77765175 219385755 1 6 441 2 0 0 1 3 0.3 0 4 0 0 4 3 4 5 3 3 89.79 99.9 0 363 4 1 Whitelist MELA-AU 4 0.68 0 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma Before polyploidization 9 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 3 45300747 61367627 1 2 441 1 1 0 0 0 0.57 0 4 0 0 4 3 4 6 3 4 89.79 96.94 0 77 3 1 Whitelist MELA-AU 0.68 0 0 0 0.64 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 4 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 4 28707038 182542170 242 316 441 66 56 66 54 74 0.57 0 347 0 0 347 7 13 348 7 7 89.79 99.75 0 406 5 3 Whitelist MELA-AU 8 0.7 0 0 0 0.64 1 High confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma With other complex events 558 0.63 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 5 72255242 133138296 1 4 441 2 0 0 0 2 0.11 0 6 0 0 6 3 6 9 5 5 89.79 99.53 0.35 219 3 2 Whitelist MELA-AU 0.54 0 0 0 0.48 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 6 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 6 64418967 82432584 2 5 441 0 0 1 1 3 0.57 0.01 3 0 0 NA NA NA 12 9 9 89.79 99.86 0 72 4 3 Whitelist MELA-AU 8 0.62 0.04 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma With other complex events 7 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 7 110317514 110413911 1 1 441 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 89.79 97.45 0 22 5 NA Whitelist MELA-AU 0.62 0 0 NA 0.59 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 8 35775519 80798642 23 63 441 3 5 10 5 40 0.2 0 46 0 0 46 14 20 51 14 16 89.79 70.44 26.15 168 6 5 Whitelist MELA-AU 4 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma With other complex events 86 0.1 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 9 NA NA 0 0 441 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 10 72254377 73526627 3 5 441 1 0 1 1 2 0.8 0.91 3 0 0 NA NA NA 12 3 4 89.79 28.54 67.97 0 2 1 Whitelist MELA-AU 0.93 1 0 0 0.84 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 8 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 11 NA NA 0 0 441 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 12 NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 13 NA NA 0 0 441 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0 NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 14 NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 15 33096486 40754384 2 9 441 0 1 1 0 7 0.57 0.77 10 0 0 10 3 10 12 3 11 89.79 76.23 23.77 0 3 4 Whitelist MELA-AU 4 0.68 0.93 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma With other complex events 11 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 16 77673080 77709113 1 1 441 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 89.79 99.86 0.04 18 2 4 Whitelist MELA-AU 0.62 0 NA NA 0.59 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 17 52547032 52585935 1 1 441 0 0 0 1 0 0.39 0 3 0 NA NA NA NA 4 3 3 89.79 95.5 0.05 1 4 2 Whitelist MELA-AU 0.62 0.02 0 NA 0.59 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 18 NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 19 28046072 29639673 1 1 441 1 0 0 0 0 0.39 0.06 3 NA NA NA NA NA 9 3 4 89.79 92.72 0 29 3 4 Whitelist MELA-AU 0.62 0.18 NA NA 0.59 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 20 2458510 12353564 2 2 441 0 0 1 1 0 0.57 0.03 4 0 0 4 4 4 7 4 7 89.79 99.01 0 27 3 6 Whitelist MELA-AU 0.68 0.11 0 0 0.64 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 4 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 21 NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 22 NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0230 X NA NA 0 0 441 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0230 MELA 0.74 3.69 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:4 3 MELA-AU DO220903 MELA-0230 male alive C43.5 surgery unknown 16 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 40.66 MELA-AU::MELA-0231 1 49615754 106759581 43 100 1234 10 13 11 9 57 0.85 0 77 0 0 77 10 11 109 10 11 79.88 87.81 9.13 4 5 6 Whitelist MELA-AU 11_12_2_20_5_6_7_9 0.81 0 0 0 0.89 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 143 0.06 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 2 5310579 242675572 57 198 1234 16 11 13 17 141 0.66 0 198 0 0 198 7 19 204 7 13 79.88 82.84 14.48 15 4 5 Whitelist MELA-AU 10_11_18_20_4_5_6_7_8_9 0.87 0 0 0 0.74 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 255 0.1 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 3 69825696 89596752 18 22 1234 2 3 6 7 4 0.29 0.2 25 0 0 25 3 4 70 5 8 79.88 96.44 0.39 0 6 10 Whitelist MELA-AU 0.68 0.42 0 0 0.59 1 No MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma NA 40 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 4 58934408 183626934 10 38 1234 2 2 4 2 28 0.75 0.01 47 0 0 47 5 10 103 11 17 79.88 79.7 17.56 13 4 6 Whitelist MELA-AU 10_18_2_7 0.62 0.03 0 0 0.83 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 48 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 5 4413255 157081452 80 146 1234 20 15 21 24 66 0.55 0 150 0 0 150 8 12 158 8 12 79.88 92.17 7.71 5 5 6 Whitelist MELA-AU 10_11_14_2_20_4_7_8 0.62 0 0 0 0.64 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 226 0.09 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 6 76285221 169646112 37 133 1234 10 10 6 11 96 0.66 0 117 0 0 117 8 9 171 10 12 79.88 86.51 10.6 1 4 3 Whitelist MELA-AU 1_11_2_20_4_7_8 0.68 0 0 0 0.74 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 170 0.07 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 7 712296 54531288 23 38 1234 8 5 6 4 15 0.68 0 37 0 0 37 5 26 96 8 10 79.88 83.85 13.18 0 2 3 Whitelist MELA-AU 1_12_14_5 0.73 0 0 0 0.75 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 61 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 8 9543398 106192556 7 54 1234 2 6 4 2 40 0.37 0 61 0 0 61 6 8 106 6 8 79.88 87.29 8.76 2 6 3 Whitelist MELA-AU 12_15_18_2_6 0.62 0 0 0 0.59 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 68 0.03 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 9 396152 20238662 9 27 1234 1 4 3 1 18 0.39 0.56 29 0 0 29 8 9 60 8 9 79.88 84.53 15.3 0 2 4 Whitelist MELA-AU 1_11 0.62 0.78 0 0 0.59 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 36 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 10 19180867 131722346 1 39 1234 2 2 0 0 35 0.26 0.07 27 0 0 27 7 12 27 7 12 79.88 61.85 34.51 0 3 4 Whitelist MELA-AU 2_4_5_8 0.63 0.2 0 0 0.59 1 Linked to high confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 43 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 11 85905386 127883071 7 35 1234 0 3 2 2 28 0.44 0.03 43 0 0 43 7 11 88 7 9 79.88 96.73 0 3 7 6 Whitelist MELA-AU 1_2_20_4_6_9 0.62 0.11 0 0 0.64 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 42 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 12 4111597 34617370 9 15 1234 3 3 1 2 6 0.75 0 27 0 0 27 7 7 44 7 15 79.88 95.47 0.48 0 4 3 Whitelist MELA-AU 9 0.85 0 0 0 0.83 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 24 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 13 107620971 113804174 1 8 1234 0 0 0 2 6 0.11 0 5 0 0 5 3 5 19 7 7 79.88 43.46 53.19 0 3 2 Whitelist MELA-AU 10 0.87 0.02 0 0 0.48 1 No MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma NA 10 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 14 27456610 34055768 17 33 1234 5 9 1 2 16 0.03 0 16 0 0 16 5 5 61 7 7 79.88 74.69 24.4 0 7 6 Whitelist MELA-AU 2 0.67 0 0 0 0.33 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 50 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 15 27228030 90601942 1 8 1234 1 3 0 0 4 0.11 0 10 0 0 10 6 10 18 8 8 79.88 80.01 15.11 0 3 4 Whitelist MELA-AU 0.62 0 0 0 0.48 1 Linked to low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma After polyploidization 12 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 16 76956420 89223828 9 18 1234 2 4 0 3 9 0.27 1 18 0 0 18 5 9 37 5 9 79.88 86.96 12.32 0 3 2 Whitelist MELA-AU 11_X 0.68 1 0 0 0.59 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 27 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 17 15286057 21834737 2 4 1234 1 0 0 1 2 0.57 0 7 0 0 7 5 7 10 5 5 79.88 88.99 5.8 0 3 4 Whitelist MELA-AU 14 0.68 0 0 0 0.64 1 Linked to low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma After polyploidization 6 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 18 58999177 77021615 10 35 1234 4 2 2 2 25 0.75 0 39 0 0 39 6 10 88 6 11 79.88 95.17 0 0 6 5 Whitelist MELA-AU 6 0.62 0 0 0 0.83 1 Low confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 45 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 19 29460206 29550746 1 5 1234 1 1 0 0 3 0.57 0 3 0 0 NA NA NA 9 4 6 79.88 91.88 0 0 4 6 Whitelist MELA-AU 0.68 0.02 0 0 0.64 1 No MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma NA 7 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 20 5565486 62296242 1 52 1234 2 3 2 1 44 0.8 0 53 0 0 53 6 7 59 6 7 79.88 89.57 2.93 3 6 5 Whitelist MELA-AU 1_11_12_14_2_5_7 0.87 0 0 0 0.84 1 Linked to high confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 60 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 21 10829384 24915155 3 5 1234 2 1 0 0 2 0.3 0 11 0 0 11 4 11 31 7 7 79.88 65.57 10.51 0 3 2 Whitelist MELA-AU 0.68 0.02 0 0 0.59 1 No MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma NA 8 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 22 24177865 42033816 1 3 1234 1 1 0 0 1 0.57 0.05 6 0 0 6 3 6 12 3 3 79.88 85.08 14.92 0 3 4 Whitelist MELA-AU 0.62 0.16 0 0 0.64 1 No MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma NA 5 0 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0231 X 114145722 144057315 8 9 1234 3 2 1 2 1 0.8 0.02 24 0 0 24 9 14 61 9 10 79.88 52.34 43.82 5 4 3 Whitelist MELA-AU 0.85 0.07 0 0 0.84 1 High confidence MELA-AU MELA-0231 MELA 0.92 4.03 Skin-Melanoma With other complex events 17 0.01 nonsynonymous_SNV,17_7578479_C_G,CN:4 4 MELA-AU DO220904 MELA-0231 male deceased C43.5 radiation therapy unknown 48 3023 3023 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 99.44 MELA-AU::MELA-0232 1 93300135 93311943 1 1 34 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 33.1 0 100 0 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 2 30761516 188817040 1 3 34 2 1 0 0 0 0.3 0.2 5 0 0 5 3 5 5 3 3 33.1 10.84 89.07 2 2 1 Whitelist MELA-AU 0.62 0.43 0 0 0.59 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 6 0.09 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 3 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 4 90218996 91142877 2 2 34 0 2 0 0 0 0.11 1 4 NA 0 4 0 3 5 0 3 33.1 99.55 0.35 0 1 2 Whitelist MELA-AU 0.54 1 NA 0 0.48 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 5 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 6 NA NA 0 0 34 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 8 108467116 130658990 1 2 34 0 2 0 0 0 0.11 0.25 4 0 0 4 4 4 7 5 5 33.1 1.6 98.4 1 2 3 Whitelist MELA-AU 0.54 0.49 0 0 0.48 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 9 33265203 34947100 2 2 34 1 0 1 0 0 0.57 0 4 0 0 4 4 4 15 5 7 33.1 27.79 69.1 0 1 2 Whitelist MELA-AU 0.68 0.01 0 0 0.64 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 10 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 11 40525238 40614644 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 33.1 99.57 0 0 0 1 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 12 23862711 23994372 1 1 34 1 0 0 0 0 0.39 0.67 2 NA 0 NA NA NA NA NA NA 33.1 0.1 99.82 0 1 2 Whitelist MELA-AU 0.62 0.88 NA 0 0.59 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 13 70229462 70307104 2 2 34 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 33.1 0.87 99.13 0 2 NA Whitelist MELA-AU 0.68 0.03 0 0 0.64 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 14 90188916 91091682 1 1 34 0 1 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 33.1 0.84 98.25 0 2 3 Whitelist MELA-AU 0.62 0.54 NA NA 0.59 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 2 0.03 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 18 33876535 33950716 2 2 34 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 5 5 5 33.1 0.89 99.07 0 2 NA Whitelist MELA-AU 0.68 0.06 0 0 0.64 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 4 0.06 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 22 NA NA 0 0 34 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.59 NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0232 X NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0232 MELA 0.96 1.66 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220905 MELA-0232 female deceased C43.5 surgery unknown 47 248 248 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 8.16 MELA-AU::MELA-0234 1 93226792 242708674 1 7 128 1 1 0 0 5 0.57 0.51 8 0 0 8 5 8 11 6 6 15.83 41.66 58.33 208 3 2 Whitelist MELA-AU 4 0.77 0.75 0 0 0.64 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 9 0.04 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 2 33363583 211148853 1 2 128 2 0 0 0 0 0.11 0.87 6 0 0 6 6 6 8 8 8 15.83 0.45 99.44 465 1 2 Whitelist MELA-AU 0.54 1 0 0 0.48 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 3 120564437 174662530 1 4 128 1 1 0 0 2 0.57 0.22 4 0 0 4 3 4 7 3 3 15.83 0.09 99.88 172 2 1 Whitelist MELA-AU 11 0.62 0.46 0 0 0.64 1 Linked to high confidence MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma Canonical without polyploidization 6 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 4 79320305 182601508 2 9 128 0 0 1 3 5 0.11 0 11 0 0 11 11 11 20 15 15 15.83 28.42 69.22 411 2 1 Whitelist MELA-AU 1 0.85 0.01 0 0 0.48 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 13 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 5 38383980 101611034 1 8 128 4 3 0 1 0 0.17 0.02 11 0 0 11 5 9 14 6 6 15.83 32.63 67.22 276 2 1 Whitelist MELA-AU 0.62 0.07 0 0 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 16 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 6 55721550 106115188 2 4 128 1 0 0 1 2 0.57 0.06 5 0 0 5 4 5 10 4 8 15.83 3.98 93.16 206 1 2 Whitelist MELA-AU 0.68 0.19 0 0 0.64 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 6 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 7 18231693 154919885 1 9 128 4 2 0 0 3 0.06 0.01 12 0 0 12 7 10 16 7 10 15.83 76.54 23.23 151 2 1 Whitelist MELA-AU 10 0.62 0.05 0 0 0.48 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 15 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 8 86092082 141533852 1 5 128 1 0 1 1 2 0.8 0.31 3 0 0 NA NA NA NA NA NA 15.83 0.32 99.67 348 2 1 Whitelist MELA-AU 0.68 0.56 0 0 0.84 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 8 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 9 16912873 17176247 1 1 128 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 15.83 0.19 99.68 10 2 3 Whitelist MELA-AU 0.62 0.74 NA NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 10 66197945 99419999 1 2 128 1 0 0 0 1 0.39 0.39 4 0 NA 4 4 4 10 10 10 15.83 33.67 66.14 77 1 2 Whitelist MELA-AU 0.68 0.64 0 NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 3 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 11 83286872 101298726 6 6 128 1 0 3 2 0 0.34 0 8 0 0 8 8 8 10 10 10 15.83 32.07 67.5 103 1 2 Whitelist MELA-AU 0.62 0 0 0 0.59 1 High confidence MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma Canonical without polyploidization 12 0.05 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 12 80898266 81052510 1 1 128 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 15.83 0.61 99.31 33 2 4 Whitelist MELA-AU 0.62 0.33 NA NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 13 67366687 69746654 2 2 128 0 0 1 1 0 0.57 0.33 1 NA 0 NA NA NA NA NA NA 15.83 0 100 0 2 NA Whitelist MELA-AU 0.68 0.58 NA 0 0.64 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 14 67821552 67875354 1 1 128 0 1 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 15.83 0 99.09 0 2 NA Whitelist MELA-AU 0.62 0.95 NA NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 15 NA NA 0 0 128 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.81 NA NA NA 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 16 11885577 47576581 1 3 128 2 1 0 0 0 0.3 0.4 3 0 0 NA NA NA NA NA NA 15.83 0.28 99.67 97 2 1 Whitelist MELA-AU 0.62 0.65 0 0 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 6 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 17 28580714 30543477 1 1 128 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 8 6 6 15.83 60.91 34.62 0 1 2 Whitelist MELA-AU 0.62 0.94 NA NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 18 NA NA 0 0 128 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.51 NA NA NA 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 19 18397375 18509523 1 2 128 1 0 0 1 0 0.57 0.74 3 0 0 NA NA NA 5 5 5 15.83 0.15 99.68 0 2 1 Whitelist MELA-AU 0.68 0.91 0 0 0.64 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 20 NA NA 0 0 128 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 21 NA NA 0 0 128 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 22 17084416 37730414 1 1 128 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.83 0 100 2 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0234 X NA NA 0 0 128 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 0 NA NA 1 No MELA-AU MELA-0234 MELA 0.92 1.98 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 MELA-AU DO220906 MELA-0234 female deceased C43.5 surgery unknown 70 842 842 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 27.7 MELA-AU::MELA-0236 1 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 2 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 3 102141478 108054279 1 1 23 0 0 1 0 0 0.39 0.67 4 NA 0 4 0 3 5 0 4 27.72 46.32 53.65 0 1 2 Whitelist MELA-AU 0.62 0.88 NA 0 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 4 117688871 117706754 1 1 23 1 0 0 0 0 0.39 0.2 1 0 NA NA NA NA NA NA NA 27.72 0.01 99.96 23 2 NA Whitelist MELA-AU 0.62 0.42 0 NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 5 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 6 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 7 102841237 102865742 1 1 23 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 5 3 3 27.72 99.78 0.01 14 3 4 Whitelist MELA-AU 0.62 0.12 0 NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 8 NA NA 0 0 23 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.58 NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 9 21818746 22059342 1 1 23 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 27.72 99.3 0 0 0 1 Whitelist MELA-AU 0.62 0.82 NA NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 10 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 11 80703387 80787476 1 1 23 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.72 0 99.44 8 2 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 12 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 14 69305442 70206301 1 1 23 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 27.72 0.84 83.25 3 2 3 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 16 NA NA 0 0 23 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.71 NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 17 28342277 44262934 2 4 23 1 0 0 1 2 0.57 0 3 0 0 NA NA NA NA NA NA 27.72 0.32 99.66 1 2 1 Whitelist MELA-AU 0.68 0 0 0 0.64 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 6 0.13 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 18 34574064 35197443 1 1 23 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 27.72 0.8 99.17 8 2 3 Whitelist MELA-AU 0.62 0.71 NA NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 19 11823880 13246842 1 1 23 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 27.72 2.41 97.42 0 1 2 Whitelist MELA-AU 0.62 0.62 NA NA 0.59 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0236 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0236 MELA 0.88 1.9 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220907 MELA-0236 male alive C43.4 surgery unknown 30 1176 1176 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 38.68 MELA-AU::MELA-0237 1 57630527 57657174 1 1 36 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 85.03 100 0 0 3 NA Whitelist MELA-AU 0.62 0.62 NA NA 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 2 0.03 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 2 140281697 140315472 1 1 36 1 0 0 0 0 0.39 0.54 2 0 NA NA NA NA NA NA NA 85.03 99.88 0.01 0 2 3 Whitelist MELA-AU 0.62 0.77 0 NA 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 2 0.03 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 3 100059034 183188771 5 9 36 1 0 3 1 4 0.28 0 4 0 0 4 3 4 5 3 3 85.03 84.03 15.91 9 2 1 Whitelist MELA-AU 0.85 0 0 0 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 14 0.19 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 4 30767049 130038083 1 3 36 1 0 1 1 0 0.8 0.09 5 0.03 0 5 4 5 6 4 4 85.03 97.21 2.77 12 4 5 Whitelist MELA-AU 0.87 0.25 0.03 0 0.84 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 6 0.08 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 5 165353385 166363396 4 4 36 4 0 0 0 0 0.01 0.01 6 0 0 6 3 6 7 3 3 85.03 99.73 0.13 6 1 2 Whitelist MELA-AU 0.21 0.03 0 0 0.16 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 8 0.11 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 6 50633907 152873379 1 3 36 2 0 1 0 0 0.3 0.17 6 0 0 6 4 6 10 4 5 85.03 99.86 0 23 4 5 Whitelist MELA-AU 0.62 0.38 0 0 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 6 0.08 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 7 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 8 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 4 9 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 11 98257860 133691700 1 2 36 2 0 0 0 0 0.11 0.68 4 NA 0 4 3 4 9 6 6 85.03 70.04 29.53 11 2 1 Whitelist MELA-AU 0.54 0.88 NA 0 0.48 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 4 0.06 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 12 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 13 109012092 109483856 1 1 36 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA 5 3 3 85.03 100 0 2 5 6 Whitelist MELA-AU 0.62 0.61 NA NA 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 2 0.03 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 15 38658320 65460077 1 1 36 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 85.03 99.86 0 3 3 4 Whitelist MELA-AU 0.62 0.22 NA NA 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 2 0.03 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 17 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 19 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0237 X 28154112 28290243 1 1 36 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 85.03 18.22 81.78 0 2 3 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0237 MELA 0.85 3.53 Skin-Melanoma NA 2 0.03 NA 3 MELA-AU DO220908 MELA-0237 male alive C43.4 surgery unknown 19 3439 3439 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 113.12 MELA-AU::MELA-0239 1 36546861 105343304 48 48 93 13 14 11 10 0 0.84 0 63 0 0 63 42 42 66 42 42 42.77 70.7 26.32 11 2 1 Whitelist MELA-AU 0.9 0 0 0 0.88 1 High confidence MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma Canonical without polyploidization 96 0.52 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 2 99713046 188964605 1 2 93 2 0 0 0 0 0.11 0.09 2 NA 0 NA NA NA 4 4 4 42.77 10.97 88.94 4 1 2 Whitelist MELA-AU 0.54 0.25 NA 0 0.48 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 3 NA NA 0 0 93 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.2 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 4 153767559 154642561 1 4 93 1 0 0 0 3 0.39 0.68 3 0 0 NA NA NA 4 4 4 42.77 0.72 99.06 2 2 1 Whitelist MELA-AU 1 0.88 0 0 0.59 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 5 0.03 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 5 NA NA 0 0 93 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 0.87 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 6 NA NA 0 0 93 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.97 0 NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 7 24680071 146372203 1 6 93 3 0 1 0 2 0.11 0.35 6 0 0 6 6 6 7 7 7 42.77 81.9 15.55 7 2 3 Whitelist MELA-AU 0.54 0.6 0 0 0.48 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 10 0.05 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 8 144579539 144605824 1 1 93 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 42.77 98.79 1.2 10 2 3 Whitelist MELA-AU 0.62 0.59 NA NA 0.59 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 9 17268583 17425763 1 1 93 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 3 42.77 99.58 0.28 1 4 NA Whitelist MELA-AU 0.62 1 NA NA 0.59 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 10 66752945 93089174 1 5 93 3 0 0 0 2 0.03 0 8 0 0 8 4 8 9 4 4 42.77 14.9 84.93 1 1 2 Whitelist MELA-AU 0.45 0.02 0 0 0.33 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 8 0.04 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 11 80076168 80982547 1 1 93 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 6 0 6 42.77 36.21 59.56 0 1 3 Whitelist MELA-AU 0.62 0.95 NA NA 0.59 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 12 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 13 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 14 NA NA 0 0 93 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.63 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 15 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 16 34790777 34856081 1 1 93 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 42.77 0 99.9 1 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 2 0.01 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 17 NA NA 0 0 93 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.76 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 18 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 19 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 20 NA NA 0 0 93 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.9 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 21 NA NA 0 0 93 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.57 NA NA NA 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 22 39844163 45631665 2 2 93 0 0 1 1 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 42.77 100 0 0 4 NA Whitelist MELA-AU 0.68 0.1 0 0 0.64 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0239 X 113471727 120886384 1 2 93 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 42.77 100 0 0 1 NA Whitelist MELA-AU 0.54 1 0 0 0.48 1 No MELA-AU MELA-0239 MELA 0.82 2.22 Skin-Melanoma NA 4 0.02 NA 2 MELA-AU DO220910 MELA-0239 male alive C43.3 surgery unknown 43 4635 4635 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 152.47 MELA-AU::MELA-0256 1 115795928 118334646 3 5 92 1 0 1 1 2 0.8 0.02 6 0 0 6 6 6 18 10 12 66.23 96.97 0 12 3 4 Whitelist MELA-AU 0.93 0.07 0 0 0.84 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 8 0.04 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 2 14372993 228947272 1 7 92 1 3 0 0 3 0.11 0.85 8 0 0 8 3 4 9 3 4 66.23 88.56 11.31 115 4 2 Whitelist MELA-AU 0.62 0.99 0 0 0.48 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 11 0.06 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 3 60656879 184136487 1 3 92 2 0 1 0 0 0.3 0.41 8 0 0 8 5 8 10 5 10 66.23 99.6 0.37 78 4 2 Whitelist MELA-AU 0.62 0.66 0 0 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 6 0.03 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 4 182867741 183198882 3 3 92 1 0 1 1 0 0.8 1 4 0 0 4 0 3 9 5 5 66.23 99.94 0.05 41 1 2 Whitelist MELA-AU 0.87 1 0 0 0.84 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 6 0.03 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 5 142667543 142734512 1 1 92 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 3 3 66.23 25.51 71.81 0 0 2 Whitelist MELA-AU 0.62 0.32 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 6 161907945 162091620 22 22 92 8 7 4 3 0 0.38 0 4 0 0 4 3 4 8 4 7 66.23 35.87 61.28 0 0 1 Whitelist MELA-AU 0.62 0 0 0 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 44 0.24 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 7 55877278 147685196 1 3 92 3 0 0 0 0 0.03 0.82 6 0 0 6 4 6 8 4 8 66.23 97.23 0 79 6 4 Whitelist MELA-AU 0.41 0.96 0 0 0.33 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 6 0.03 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 8 27343023 27414756 1 1 92 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 9 4 4 66.23 8.01 88.57 0 2 4 Whitelist MELA-AU 0.62 0.59 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 9 26662441 71090088 1 1 92 0 1 0 0 0 0.39 0.27 5 NA NA 5 0 4 6 3 4 66.23 19.73 79.95 2 2 3 Whitelist MELA-AU 0.62 0.52 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 10 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 11 97956766 98044371 1 1 92 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 3 3 66.23 59.27 40.31 2 0 2 Whitelist MELA-AU 0.62 0.33 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 12 NA NA 0 0 92 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.33 NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 13 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 14 28442612 74038990 1 3 92 2 1 0 0 0 0.3 0.77 4 0 0 4 3 4 5 3 3 66.23 99.09 0 18 4 3 Whitelist MELA-AU 0.62 0.93 0 0 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 6 0.03 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 15 42304461 42346470 1 1 92 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 66.23 99.87 0 0 4 5 Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 16 67325981 67337743 1 1 92 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 66.23 51.3 48.59 1 2 NA Whitelist MELA-AU 0.62 0.76 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 17 28026096 58721442 1 2 92 1 1 0 0 0 0.57 0.32 4 0 0 4 3 4 5 3 3 66.23 98.54 0.36 13 3 2 Whitelist MELA-AU 0.68 0.57 0 0 0.64 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 4 0.02 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 18 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 19 47842106 48215836 1 1 92 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 66.23 99.83 0 0 4 6 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 2 0.01 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 20 51159130 53745905 4 4 92 2 1 0 1 0 0.57 0 3 0 0 NA NA NA 10 3 7 66.23 92.77 0 3 5 6 Whitelist MELA-AU 0.68 0.01 0 0 0.64 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 8 0.04 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 21 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 22 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma NA 0 0 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0256 X 119143192 141952863 6 6 92 2 3 1 0 0 0.34 0.14 10 0 0 10 4 10 13 4 13 66.23 0.47 99.3 0 1 2 Whitelist MELA-AU 0.62 0.34 0 0 0.59 0 Low confidence MELA-AU MELA-0256 MELA 0.7 3.38 Skin-Melanoma With other complex events 12 0.07 NA 3 MELA-AU DO220911 MELA-0256 female deceased C43.6 39 4015 4015 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 132.07 MELA-AU::MELA-0257 1 119903334 119913716 1 1 24 0 0 1 0 0 0.39 0.71 1 NA NA NA NA NA 8 0 3 20.39 48.97 48 0 6 NA Whitelist MELA-AU 0.62 0.9 NA NA 0.59 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 2 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 4 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 5 109003167 112081996 1 1 24 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 20.39 1.7 98.15 50 1 2 Whitelist MELA-AU 0.62 0.87 NA NA 0.59 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 6 57171450 78239958 2 2 24 1 0 1 0 0 0.57 0.01 4 0 0 4 4 4 5 4 4 20.39 87.79 12.07 31 1 2 Whitelist MELA-AU 0.68 0.06 0 0 0.64 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 4 0.08 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 7 144656476 153928454 1 1 24 0 0 0 1 0 0.39 0.14 1 0 NA NA NA NA 4 4 4 20.39 30.45 66.82 77 3 NA Whitelist MELA-AU 0.62 0.33 0 NA 0.59 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 8 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 9 21915903 21974796 1 1 24 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 20.39 0 99.86 0 2 NA Whitelist MELA-AU 0.62 0.48 NA NA 0.59 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 2 0.04 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 11 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 12 18133111 59324058 1 2 24 1 0 1 0 0 0.57 0.1 2 0 0 NA NA NA NA NA NA 20.39 0.01 99.9 26 1 2 Whitelist MELA-AU 0.68 0.27 0 0 0.64 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 4 0.08 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 13 NA NA 0 0 24 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.79 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 14 NA NA 0 0 24 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist MELA-AU NA 0.39 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 15 NA NA 0 0 24 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.74 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 18 NA NA 0 0 24 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.72 NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 21 10972122 29533096 1 2 24 1 1 0 0 0 0.57 0.03 4 NA 0 4 4 4 4 4 4 20.39 12.61 64.75 21 2 3 Whitelist MELA-AU 0.68 0.12 NA 0 0.64 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 4 0.08 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0257 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0257 MELA 0.67 1.94 Skin-Melanoma NA 0 0 NA 2 MELA-AU DO220912 MELA-0257 female deceased C43.6 37 2575 2575 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 84.7 MELA-AU::MELA-0259 1 195975201 196140629 2 2 85 0 0 1 1 0 0.57 0 5 0 0 5 4 5 16 5 6 86.3 96.66 0.31 0 2 3 Whitelist MELA-AU 0.68 0 0 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 2 26028978 27400581 1 1 85 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 86.3 99.33 0.56 6 2 4 Whitelist MELA-AU 0.62 0.3 NA NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 3 5892343 153788220 1 6 85 3 0 0 0 3 0.03 1 6 0.06 0 6 3 5 13 3 5 86.3 99.51 0.46 43 5 2 Whitelist MELA-AU 0.54 1 0.06 0 0.33 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 9 0.05 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 4 43543929 189855054 1 6 85 1 1 0 0 4 0.57 0.19 8 0 0 8 5 8 9 5 5 86.3 99.91 0 24 5 3 Whitelist MELA-AU 0.62 0.41 0 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 8 0.05 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 5 11972787 19790358 1 2 85 1 1 0 0 0 0.57 0.82 2 0.2 0 NA NA NA 10 3 4 86.3 96.21 1.13 4 2 6 Whitelist MELA-AU 0.68 0.96 0.2 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 6 97288617 97317830 1 1 85 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 8 4 4 86.3 28.62 71.23 0 2 3 Whitelist MELA-AU 0.62 0.49 NA NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 7 1495795 1705870 1 6 85 2 0 0 0 4 0.11 0.05 5 0 0 5 3 5 11 3 5 86.3 97.44 0.01 0 5 1 Whitelist MELA-AU 1 0.62 0.16 0 0 0.48 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 8 0.05 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 8 123633375 142007649 5 12 85 0 1 2 2 7 0.53 0 2 0 0 NA NA NA 8 3 3 86.3 99.98 0.02 32 4 6 Whitelist MELA-AU 0.62 0 0 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 17 0.1 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 9 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 10 629092 90134957 1 4 85 2 0 0 0 2 0.11 0.06 10 0 0 10 3 5 13 5 5 86.3 94.11 2.47 12 0 3 Whitelist MELA-AU 0.68 0.19 0 0 0.48 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 6 0.04 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 11 27504437 27859111 1 1 85 1 0 0 0 0 0.39 0.12 2 0.02 NA NA NA NA 14 3 3 86.3 99.31 0.26 4 2 4 Whitelist MELA-AU 0.62 0.3 0.02 NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 12 130465960 130506841 1 1 85 1 0 0 0 0 0.39 0.3 2 0 NA NA NA NA 9 5 5 86.3 99.69 0.23 12 2 4 Whitelist MELA-AU 0.62 0.54 0 NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 13 NA NA 0 0 85 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.93 NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 14 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist MELA-AU NA 1 NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 15 95847376 97104624 1 4 85 1 0 0 1 2 0.57 0 2 0 0 NA NA NA 9 3 9 86.3 99.39 0.51 0 3 4 Whitelist MELA-AU 0.68 0 0 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 6 0.04 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 16 56206012 56369793 1 1 85 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 86.3 99.89 0 5 4 6 Whitelist MELA-AU 0.62 1 NA NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 17 NA NA 0 0 85 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.91 NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 18 NA NA 0 0 85 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA 0.91 NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 19 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 20 11635027 50613594 1 3 85 1 0 1 1 0 0.8 0.43 2 0 0 NA NA NA NA NA NA 86.3 99.04 0 9 3 5 Whitelist MELA-AU 0.87 0.68 0 0 0.84 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 6 0.04 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 21 23333367 44404137 1 1 85 0 0 0 1 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 86.3 77.63 0 9 6 NA Whitelist MELA-AU 0.62 0.52 NA NA 0.59 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 2 0.01 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 22 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist MELA-AU NA NA NA NA NA 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 0 0 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 MELA-AU::MELA-0259 X 4901676 96000504 1 2 85 1 1 0 0 0 0.57 0.8 7 0.46 0 7 3 5 8 3 6 86.3 0.23 96.61 8 2 0 Whitelist MELA-AU 0.68 0.95 0.47 0 0.64 0 No MELA-AU MELA-0259 MELA 0.49 4.11 Skin-Melanoma NA 4 0.02 NA 4 MELA-AU DO220913 MELA-0259 male deceased C43.6 49 512 512 Smoking history not documented NA Don't know/Not sure Not Documented Included Skin-Melanoma MELA AU 1 16.84 ORCA-IN::OSCC-GB_011301 1 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.9 NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 2 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 7 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 8 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 9 20952759 21028217 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 80.29 49.43 49.87 0 0 3 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 2 0.04 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 11 57177919 132661065 14 15 25 5 5 2 2 1 0.46 0 39 0 0 39 3 6 46 3 4 80.29 90.63 5.9 7 16 4 Whitelist ORCA-IN 0.73 0 0 0 0.64 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 29 0.58 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011301 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011301 ORCA 0.18 3.4 Head-SCC NA 0 0 NA 3 ORCA-IN DO218012 OSCC-GB_011301 male alive C06.0 radiation therapy complete response 32 NA 630 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 20.72 ORCA-IN::OSCC-GB_011601 1 236924971 236961923 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.99 0.01 99.99 0 2 3 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 2 141885931 148646071 1 2 28 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 24.99 0.32 99.59 1 2 1 Whitelist ORCA-IN 0.68 1 NA 0 0.64 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 4 0.07 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 3 60656439 178687731 1 3 28 2 0 0 0 1 0.11 0.04 5 0 0 5 4 5 6 4 4 24.99 44.5 52.35 3 1 2 Whitelist ORCA-IN 0.62 0.15 0 0 0.48 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 5 0.09 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 4 136735318 136795246 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 24.99 99.78 0 0 0 1 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 5 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 6 123560201 123571504 1 1 28 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 24.99 0 99.86 0 2 NA Whitelist ORCA-IN 0.62 0.88 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 7 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 8 101946203 101971846 1 1 28 0 1 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 24.99 0.02 99.98 3 2 3 Whitelist ORCA-IN 0.62 0.86 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 9 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 11 65324193 103956814 1 2 28 0 2 0 0 0 0.11 0 4 0 0 4 0 3 5 0 0 24.99 39.24 60.33 4 2 3 Whitelist ORCA-IN 0.54 0 0 0 0.48 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 4 0.07 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 12 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 13 82209447 82412017 1 1 28 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA 5 4 4 24.99 67.78 32.22 0 2 3 Whitelist ORCA-IN 0.62 0.49 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 16 NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.39 NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 18 48549147 48587096 1 1 28 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 24.99 75.05 19.69 0 0 1 Whitelist ORCA-IN 0.62 0.76 NA NA 0.59 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 2 0.04 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011601 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011601 ORCA 0.38 1.86 Head-SCC NA 0 0 frameshift_deletion;frameshift_deletion,17_7578169_-_AACCAGACCTCAGGC;17_7578470_-_CGGG,CN:2 2 ORCA-IN DO218697 OSCC-GB_011601 male alive C06.1 radiation therapy complete response 62 NA 547 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 17.99 ORCA-IN::OSCC-GB_011701 1 70635206 70693708 1 1 95 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA NA NA NA 10.04 0.02 99.97 0 1 2 Whitelist ORCA-IN 0.62 0.49 0 NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 2 18093402 151563089 1 5 95 3 0 1 0 1 0.11 0.71 7 0 0 7 3 7 9 5 5 10.04 14.41 85.5 9 2 1 Whitelist ORCA-IN 0.62 0.9 0 0 0.48 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 9 0.05 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 3 NA NA 0 0 95 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.37 0 NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 4 187620530 187632166 1 1 95 1 0 0 0 0 0.39 0.42 2 0 NA NA NA NA 5 5 5 10.04 15.74 84.25 0 1 2 Whitelist ORCA-IN 0.62 0.66 0 NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 5 58895571 59123247 2 2 95 2 0 0 0 0 0.11 0.09 2 0 0 NA NA NA 8 5 5 10.04 19.27 80.59 0 1 2 Whitelist ORCA-IN 0.54 0.25 0 0 0.48 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 6 21206960 120173241 1 5 95 3 0 0 1 1 0.11 0.08 8 0 0 8 3 8 9 3 9 10.04 0.16 99.6 4 2 0 Whitelist ORCA-IN 0.62 0.23 0 0 0.48 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 9 0.05 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 7 10385883 135636667 1 4 95 3 0 0 0 1 0.03 0.36 3 0 0 NA NA NA NA NA NA 10.04 0.02 99.92 16 2 1 Whitelist ORCA-IN 0.54 0.61 0 0 0.33 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 7 0.04 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 8 78883023 78900976 2 2 95 0 0 1 1 0 0.57 0.34 1 0 0 NA NA NA NA NA NA 10.04 0 99.56 0 2 NA Whitelist ORCA-IN 0.68 0.59 0 0 0.64 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 9 19404816 22662825 1 2 95 1 0 1 0 0 0.57 0.28 4 0 0 4 3 4 6 3 3 10.04 17.42 81.9 0 3 0 Whitelist ORCA-IN 0.68 0.52 0 0 0.64 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 10 6404561 30445742 2 2 95 0 0 0 2 0 0.11 1 1 0 0 NA NA NA NA NA NA 10.04 0.11 99.7 2 2 NA Whitelist ORCA-IN 0.54 1 0 0 0.48 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 11 NA NA 0 0 95 0 0 0 0 0 NA 0.63 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.84 0 NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 12 NA NA 0 0 95 0 0 0 0 0 NA 1 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 0.01 NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 13 28013934 110831497 1 2 95 1 1 0 0 0 0.57 0.57 4 0 0 4 3 4 5 3 3 10.04 0.05 99.95 2 2 1 Whitelist ORCA-IN 0.68 0.8 0 0 0.64 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 14 90821773 91177078 1 1 95 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 10.04 0.33 98.76 0 2 3 Whitelist ORCA-IN 0.62 1 0 NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 15 71553267 71630536 1 1 95 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.04 0.08 99.82 0 1 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 16 78559120 83820846 1 4 95 3 0 0 1 0 0.11 0.04 8 0 0 8 8 8 9 9 9 10.04 0.73 99.16 0 1 2 Whitelist ORCA-IN 0.54 0.15 0 0 0.48 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 8 0.04 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 17 38802324 59478291 1 2 95 1 0 0 1 0 0.57 0.75 3 0 0 NA NA NA NA NA NA 10.04 0.27 99.72 1 2 1 Whitelist ORCA-IN 0.68 0.91 0 0 0.64 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 4 0.02 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 18 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 19 NA NA 0 0 95 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.9 NA NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 20 NA NA 0 0 95 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.9 NA NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 21 NA NA 0 0 95 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 0 0 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 22 46453851 46518195 1 1 95 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 10.04 0.13 99.87 0 1 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011701 X 96739341 96758756 1 1 95 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 10.04 100 0 0 1 NA Whitelist ORCA-IN 0.62 0.48 NA NA 0.59 0 No ORCA-IN OSCC-GB_011701 ORCA 0.32 1.99 Head-SCC NA 2 0.01 NA 2 ORCA-IN DO217836 OSCC-GB_011701 male deceased C06.0 radiation therapy complete response 44 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 10.36 ORCA-IN::OSCC-GB_011801 1 33164615 119238010 3 4 66 2 1 0 0 1 0.3 0.65 10 0 0 10 4 5 16 4 4 65.67 74.89 22.14 0 3 2 Whitelist ORCA-IN 0.62 0.86 0 0 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 7 0.05 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 2 NA NA 0 0 66 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.15 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 3 61230322 61363838 1 1 66 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 4 65.67 52.65 44.29 0 2 4 Whitelist ORCA-IN 0.62 0.25 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 2 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 4 NA NA 0 0 66 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.32 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 5 NA NA 0 0 66 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.32 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 6 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 7 14970724 30227760 1 2 66 0 1 0 0 1 0.39 0.78 4 NA NA 4 0 3 11 3 3 65.67 99.77 0 0 4 3 Whitelist ORCA-IN 0.68 0.94 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 3 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 8 2479198 146147837 1 3 66 0 2 0 0 1 0.11 0.39 10 0 0 10 3 3 11 3 4 65.67 71.6 24.83 0 2 4 Whitelist ORCA-IN 0.62 0.64 0 0 0.48 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 5 0.04 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 9 21964070 97725380 1 2 66 2 0 0 0 0 0.11 1 5 NA 0 5 0 3 7 3 3 65.67 56.49 42.81 0 0 2 Whitelist ORCA-IN 0.54 1 NA 0 0.48 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 4 0.03 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 10 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 11 68412778 105220875 7 9 66 4 2 0 1 2 0.17 0 41 0 0 41 3 5 45 3 5 65.67 95.93 0 0 11 6 Whitelist ORCA-IN 0.62 0 0 0 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 16 0.12 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 12 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 13 NA NA 0 0 66 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.74 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 14 NA NA 0 0 66 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.9 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 15 62844425 62943265 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.67 0.1 84.49 0 0 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 2 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 16 1483990 83648506 4 4 66 1 1 1 1 0 1 0.1 7 0 0 7 3 7 9 3 8 65.67 76.65 18.82 9 3 4 Whitelist ORCA-IN 1 0.27 0 0 1 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 8 0.06 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 17 57443082 79228256 3 6 66 0 1 2 0 3 0.3 0 27 0 0 27 3 8 34 4 8 65.67 38.72 56.84 0 2 3 Whitelist ORCA-IN 0.68 0 0 0 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 9 0.07 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 18 52894191 53159006 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 65.67 20.03 75.33 0 1 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 2 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 19 16587746 16607102 1 1 66 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 65.67 79.51 13.21 0 2 NA Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 2 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 20 36239850 36491067 1 2 66 0 1 0 0 1 0.39 0.05 3 0 NA NA NA NA 10 0 0 65.67 52.38 40.59 0 16 21 Whitelist ORCA-IN 0.68 0.17 0 NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 3 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 22 19430360 19444202 1 1 66 0 0 0 1 0 0.39 0.55 1 NA NA NA NA NA 7 3 3 65.67 62.44 26.45 0 6 NA Whitelist ORCA-IN 0.62 0.77 NA NA 0.59 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 2 0.02 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011801 X NA NA 0 0 66 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.51 NA NA NA 0 No ORCA-IN OSCC-GB_011801 ORCA 0.24 3.06 Head-SCC NA 0 0 stopgain,17_7577022_A_G,CN:4 3 ORCA-IN DO218075 OSCC-GB_011801 male alive C06.0 combined chemo+radiation therapy complete response 50 NA 671 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Social Drinker (> once a month, < once a week) Included Head-SCC ORCA IN 0 22.07 ORCA-IN::OSCC-GB_011901 1 NA NA 0 0 35 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.76 NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 2 141776821 141807290 1 1 35 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 3 4 74.66 60.84 36.18 0 1 3 Whitelist ORCA-IN 0.62 0.93 NA NA 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 2 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 3 NA NA 0 0 35 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.76 NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 6 270555 120449978 1 4 35 0 2 0 1 1 0.3 0.16 10 0 0 10 4 4 10 4 4 74.66 41.21 58.65 20 3 4 Whitelist ORCA-IN 0.62 0.36 0 0 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 7 0.1 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 8 3662487 100977868 1 4 35 2 0 1 1 0 0.57 0.03 12 0 0 12 3 4 17 4 5 74.66 74.4 22.18 11 6 2 Whitelist ORCA-IN 0.68 0.11 0 0 0.64 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 8 0.11 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 9 9783994 9869079 1 1 35 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 3 74.66 97.43 0 0 5 7 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 2 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 11 69448331 69952695 1 1 35 0 0 1 0 0 0.39 0.01 2 0 NA NA NA NA 10 0 3 74.66 96.54 0 3 46 49 Whitelist ORCA-IN 0.62 0.03 0 NA 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 2 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 13 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 14 26546627 28988826 4 4 35 1 2 1 0 0 0.57 0 5 0 0 5 4 5 13 4 8 74.66 96.29 0 0 6 8 Whitelist ORCA-IN 0.68 0.01 0 0 0.64 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 8 0.11 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 16 33389787 72285543 1 2 35 1 0 0 0 1 0.39 0.01 4 0 NA 4 0 4 7 0 0 74.66 51.91 43.65 4 2 3 Whitelist ORCA-IN 0.68 0.06 0 NA 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 3 0.04 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 17 29750366 57904544 1 3 35 1 0 0 1 1 0.57 0.07 3 NA 0 NA NA NA 6 3 4 74.66 95.2 0.36 1 3 2 Whitelist ORCA-IN 0.87 0.2 NA 0 0.64 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 5 0.07 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 18 NA NA 0 0 35 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.48 NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 19 NA NA 0 0 35 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.35 NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 20 34020369 34105046 1 1 35 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA 4 3 3 74.66 92.98 0 1 4 NA Whitelist ORCA-IN 0.62 0.76 NA NA 0.59 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 2 0.03 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_011901 X NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_011901 ORCA 0.27 3.32 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577085_T_C,CN:1 3 ORCA-IN DO218280 OSCC-GB_011901 male alive C06.0 radiation therapy complete response 51 NA 641 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 21.09 ORCA-IN::OSCC-GB_012001 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 3 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.21 NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 6 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.19 NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012001 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012001 ORCA 0.17 1.94 Head-SCC NA 0 0 NA 2 ORCA-IN DO218034 OSCC-GB_012001 male alive C06.0 radiation therapy complete response 47 NA 514 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 16.91 ORCA-IN::OSCC-GB_012101 1 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 2 81540005 81734729 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 13 5 5 14.52 0.49 99.42 0 2 3 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 2 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 3 3899850 4034937 1 1 22 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 4 3 3 14.52 5.02 94.84 0 1 2 Whitelist ORCA-IN 0.62 0.87 NA NA 0.59 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 2 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 4 68190654 68254727 1 2 22 0 0 1 1 0 0.57 0.06 4 0 0 4 3 4 6 3 3 14.52 6.79 93.02 0 2 1 Whitelist ORCA-IN 0.68 0.18 0 0 0.64 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 4 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 5 58998451 112631892 1 2 22 2 0 0 0 0 0.11 0.65 6 NA 0 6 6 6 7 7 7 14.52 0.22 99.66 3 1 2 Whitelist ORCA-IN 0.54 0.86 NA 0 0.48 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 4 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 7 NA NA 0 0 22 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.29 0 NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 8 3972927 3983895 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 5 14.52 96.45 0 0 0 1 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 2 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 11 18082664 66516960 1 2 22 0 2 0 0 0 0.11 0.27 5 NA 0 5 4 5 6 4 4 14.52 31.36 68.2 1 2 3 Whitelist ORCA-IN 0.54 0.52 NA 0 0.48 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 4 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 12 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 14 NA NA 0 0 22 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.75 NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 16 18858470 79200420 1 2 22 2 0 0 0 0 0.11 0.12 5 NA 0 5 5 5 5 5 5 14.52 0.72 99.18 2 2 1 Whitelist ORCA-IN 0.54 0.3 NA 0 0.48 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 4 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 22 NA NA 0 0 22 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.47 NA NA NA 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012101 X 96758449 96927932 1 2 22 1 1 0 0 0 0.57 0.31 3 NA 0 NA NA NA NA NA NA 14.52 99.92 0.08 0 1 2 Whitelist ORCA-IN 0.68 0.55 NA 0 0.64 0 No ORCA-IN OSCC-GB_012101 ORCA 0.47 2.02 Head-SCC NA 4 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 ORCA-IN DO218306 OSCC-GB_012101 male alive C06.0 combined chemo+radiation therapy complete response 45 NA 575 Current smoker (includes daily smokers non-daily/occasional smokers) NA no None Included Head-SCC ORCA IN 0 18.91 ORCA-IN::OSCC-GB_012201 1 110909264 154067264 1 1 46 1 0 0 0 0 0.39 0.78 4 NA NA 4 3 4 7 4 6 27.51 12.02 84.62 0 1 2 Whitelist ORCA-IN 0.62 0.94 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 2 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 3 60285781 138315362 1 2 46 1 0 0 1 0 0.57 1 4 NA 0 4 3 4 4 3 3 27.51 34.83 65.14 0 1 0 Whitelist ORCA-IN 0.68 1 NA 0 0.64 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 4 86937901 87008110 1 1 46 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 27.51 0 99.99 0 2 NA Whitelist ORCA-IN 0.62 0.62 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 5 52119601 118741177 1 2 46 1 1 0 0 0 0.57 0.76 6 0 0 6 5 6 8 5 5 27.51 48.75 48.57 0 2 1 Whitelist ORCA-IN 0.68 0.93 0 0 0.64 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 6 89489441 89685871 2 2 46 1 1 0 0 0 0.57 0.76 1 0 0 NA NA NA NA NA NA 27.51 0 99.73 0 2 NA Whitelist ORCA-IN 0.68 0.92 0 0 0.64 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 7 110346678 110535409 1 1 46 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA 6 3 4 27.51 0.66 96.76 0 1 2 Whitelist ORCA-IN 0.62 0.91 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 8 31697747 111030477 1 4 46 0 0 1 1 2 0.57 0.08 6 0 0 6 3 4 8 3 4 27.51 89.7 6.88 0 3 1 Whitelist ORCA-IN 1 0.24 0 0 0.64 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 6 0.07 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 9 21964521 139413780 1 2 46 2 0 0 0 0 0.11 0.7 3 NA 0 NA NA NA NA NA NA 27.51 31.65 67.64 0 0 2 Whitelist ORCA-IN 0.54 0.9 NA 0 0.48 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 10 37852157 114566666 1 3 46 2 0 0 1 0 0.3 0.16 5 0 0 5 5 5 8 7 7 27.51 27.11 72.72 0 2 1 Whitelist ORCA-IN 0.62 0.37 0 0 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 6 0.07 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 11 NA NA 0 0 46 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.37 0 NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 13 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 1 NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 14 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 15 80864232 80997621 1 1 46 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 27.51 0.13 84.46 0 2 3 Whitelist ORCA-IN 0.62 0.33 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 16 78128321 78239729 1 2 46 2 0 0 0 0 0.11 0.35 3 NA 0 NA NA NA 4 3 3 27.51 57.28 38.28 0 1 0 Whitelist ORCA-IN 0.54 0.6 NA 0 0.48 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 17 16219815 59476088 1 2 46 2 0 0 0 0 0.11 0.04 3 0 0 NA NA NA 4 4 4 27.51 3.5 96.49 0 2 1 Whitelist ORCA-IN 0.54 0.13 0 0 0.48 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 4 0.04 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 18 31770236 31805873 1 1 46 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 27.51 73.66 21.69 0 1 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 19 NA NA 0 0 46 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.46 NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 0 0 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 21 15794854 34434008 1 1 46 1 0 0 0 0 0.39 0.43 2 NA NA NA NA NA 6 3 4 27.51 63.48 7.1 0 1 2 Whitelist ORCA-IN 0.62 0.68 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 22 34056200 34079050 1 1 46 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 6 4 5 27.51 97.87 2.13 0 1 3 Whitelist ORCA-IN 0.62 0.01 0 NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012201 X 120378683 120406182 1 1 46 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 27.51 100 0 0 1 NA Whitelist ORCA-IN 0.62 0.91 NA NA 0.59 0 No ORCA-IN OSCC-GB_012201 ORCA 0.24 1.89 Head-SCC NA 2 0.02 nonsynonymous_SNV,17_7578272_A_G,CN:2 2 ORCA-IN DO218554 OSCC-GB_012201 male alive C06.0 combined chemo+radiation therapy complete response 42 NA 483 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Weekly Drinker (>=1x a week) Included Head-SCC ORCA IN 0 15.89 ORCA-IN::OSCC-GB_012301 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 5 58858112 59200286 1 1 4 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 89.13 99.67 0.19 0 2 4 Whitelist ORCA-IN 0.62 0.46 NA NA 0.59 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 2 0.25 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 7 NA NA 0 0 4 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.42 NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 13 NA NA 0 0 4 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.32 NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 16 6919091 6958500 1 1 4 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA 5 5 5 89.13 99.45 0.45 0 4 NA Whitelist ORCA-IN 0.62 0.27 NA NA 0.59 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 2 0.25 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012301 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012301 ORCA 0.38 3.84 Head-SCC NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577551_T_C;17_7578394_C_T,CN:4 4 ORCA-IN DO218773 OSCC-GB_012301 male alive C06.0 radiation therapy complete response 26 NA 601 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 19.77 ORCA-IN::OSCC-GB_012401 1 192892167 246071687 1 4 89 4 0 0 0 0 0.01 0.56 8 0 0 8 5 5 10 5 5 88.94 96.95 0.07 0 4 2 Whitelist ORCA-IN 0.21 0.78 0 0 0.16 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 8 0.04 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 2 133322646 187474511 1 4 89 4 0 0 0 0 0.01 0.45 10 0 0 10 5 10 12 5 5 88.94 99.83 0.05 0 3 0 Whitelist ORCA-IN 0.21 0.69 0 0 0.16 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 8 0.04 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 3 174737464 174936481 2 2 89 2 0 0 0 0 0.11 0.14 5 0 0 5 3 5 21 4 6 88.94 96.83 0.11 0 2 1 Whitelist ORCA-IN 0.54 0.34 0 0 0.48 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 4 0.02 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 4 91530553 91946325 2 2 89 2 0 0 0 0 0.11 0.02 5 0 0 5 0 3 26 4 5 88.94 96.98 0.65 0 2 0 Whitelist ORCA-IN 0.54 0.07 0 0 0.48 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 4 0.02 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 5 93657188 174001941 1 3 89 1 1 0 0 1 0.57 0.66 3 0 0 NA NA NA 8 4 8 88.94 97.22 0 1 4 5 Whitelist ORCA-IN 0.87 0.87 0 0 0.64 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 5 0.03 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 6 NA NA 0 0 89 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.15 NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 7 NA NA 0 0 89 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.48 NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 8 32479599 119069569 1 2 89 2 0 0 0 0 0.11 1 5 0 0 5 3 4 6 3 3 88.94 67.15 29.43 1 6 1 Whitelist ORCA-IN 0.54 1 0 0 0.48 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 4 0.02 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 9 2226772 26297686 1 4 89 2 0 0 1 1 0.3 0.4 17 0 0 17 4 8 22 6 11 88.94 97.39 0.08 2 4 5 Whitelist ORCA-IN 0.62 0.65 0 0 0.59 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 7 0.04 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 10 68413075 68477317 1 1 89 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 88.94 99.8 0.05 0 2 3 Whitelist ORCA-IN 0.62 0.42 NA NA 0.59 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 2 0.01 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 11 65210666 71176189 1 2 89 0 1 1 0 0 0.57 0.31 6 0 0 6 0 3 12 3 3 88.94 99.44 0 0 6 9 Whitelist ORCA-IN 0.68 0.56 0 0 0.64 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 4 0.02 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 12 18629366 18649492 1 1 89 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 88.94 99.92 0 0 3 NA Whitelist ORCA-IN 0.62 0.69 NA NA 0.59 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 2 0.01 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 13 NA NA 0 0 89 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.63 NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 14 27467201 27859190 1 1 89 0 0 1 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 88.94 99.09 0 0 4 NA Whitelist ORCA-IN 0.62 0.76 NA NA 0.59 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 2 0.01 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 15 71564369 71971927 1 2 89 1 1 0 0 0 0.57 0.32 8 0 0 8 3 7 9 3 7 88.94 99.98 0.02 0 4 2 Whitelist ORCA-IN 0.68 0.57 0 0 0.64 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 4 0.02 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 16 53254070 83520148 1 7 89 5 1 1 0 0 0.04 0 14 0 0 14 6 11 23 6 8 88.94 95.56 0 0 6 4 Whitelist ORCA-IN 0.47 0 0 0 0.38 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 14 0.08 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 17 NA NA 0 0 89 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.91 NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 18 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 19 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 20 6662733 15169610 3 9 89 4 1 1 0 3 0.11 0 12 0 0 12 3 4 21 3 4 88.94 92.04 0.25 0 9 10 Whitelist ORCA-IN X 0.68 0 0 0 0.48 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 15 0.08 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 21 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 22 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 0 0 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012401 X 44808632 88158142 1 7 89 0 0 2 1 4 0.3 0.09 9 0 0 9 5 7 13 5 7 88.94 16.63 79.83 0 1 4 Whitelist ORCA-IN 0.62 0.25 0 0 0.59 0 No ORCA-IN OSCC-GB_012401 ORCA 0.42 3.94 Head-SCC NA 10 0.06 frameshift_deletion,17_7579414_-_C,CN:5 3 ORCA-IN DO217950 OSCC-GB_012401 male deceased C06.0 combined chemo+radiation therapy disease progression 64 119 119 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 1 3.91 ORCA-IN::OSCC-GB_012501 1 245876045 246102593 1 2 64 2 0 0 0 0 0.11 0.24 4 NA 0 4 4 4 9 9 9 8.88 0.11 99.88 0 1 2 Whitelist ORCA-IN 0.54 0.48 NA 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 2 88479414 235768819 1 8 64 5 3 0 0 0 0.03 0.07 15 0 0 15 11 13 15 11 13 8.88 0.54 99.35 0 2 1 Whitelist ORCA-IN 0.41 0.2 0 0 0.33 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 16 0.12 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 3 189102350 189213508 2 2 64 0 0 1 1 0 0.57 0.09 2 0 0 NA NA NA 13 9 11 8.88 0.5 99.38 0 2 3 Whitelist ORCA-IN 0.68 0.24 0 0 0.64 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 4 21828976 161503938 1 3 64 2 0 0 0 1 0.11 0.8 6 NA 0 6 6 6 7 7 7 8.88 0.35 99.42 0 1 2 Whitelist ORCA-IN 0.62 0.95 NA 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 5 0.04 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 5 59049215 104624087 1 6 64 5 1 0 0 0 0.01 0.06 12 0 0 12 9 12 13 9 9 8.88 0.33 99.53 0 2 1 Whitelist ORCA-IN 0.25 0.19 0 0 0.19 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 12 0.09 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 6 28895264 56453494 1 2 64 1 1 0 0 0 0.57 0.59 3 NA 0 NA NA NA NA NA NA 8.88 0.05 99.8 0 2 4 Whitelist ORCA-IN 0.68 0.81 NA 0 0.64 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 7 110496172 110696706 2 2 64 1 1 0 0 0 0.57 0.78 3 0 0 NA NA NA 7 5 5 8.88 0.36 99.42 0 2 1 Whitelist ORCA-IN 0.68 0.93 0 0 0.64 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 8 3811673 4062960 1 1 64 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 5 5 8.88 67.39 29.19 0 1 2 Whitelist ORCA-IN 0.62 1 NA NA 0.59 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 2 0.02 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 9 28399258 29261494 2 2 64 2 0 0 0 0 0.11 0.04 4 0 0 4 0 3 7 3 5 8.88 13.42 84.05 0 0 1 Whitelist ORCA-IN 0.54 0.14 0 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 10 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 11 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 12 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 13 73874685 74114512 2 2 64 0 2 0 0 0 0.11 0.07 3 0 0 NA NA NA 8 3 3 8.88 0.42 99.58 0 2 3 Whitelist ORCA-IN 0.54 0.21 0 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 14 66989685 67427081 1 2 64 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA 4 3 4 8.88 0.28 96.01 0 2 1 Whitelist ORCA-IN 0.54 1 NA 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 15 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 16 83336744 83532661 1 2 64 2 0 0 0 0 0.11 0.69 3 NA 0 NA NA NA NA NA NA 8.88 0.07 99.83 0 2 1 Whitelist ORCA-IN 0.54 0.89 NA 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 17 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 18 33887700 34296556 3 3 64 2 1 0 0 0 0.3 0.09 3 0 0 NA NA NA NA NA NA 8.88 0.33 99.63 0 2 1 Whitelist ORCA-IN 0.62 0.25 0 0 0.59 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 6 0.05 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 19 NA NA 0 0 64 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA 0.61 NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 20 8718338 15464081 1 2 64 2 0 0 0 0 0.11 0.4 2 NA 0 NA NA NA NA NA NA 8.88 0.08 98.95 0 1 2 Whitelist ORCA-IN 0.54 0.65 NA 0 0.48 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 4 0.03 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 21 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 22 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012501 X 29240817 124795071 1 3 64 3 0 0 0 0 0.03 1 1 0 0 NA NA NA NA NA NA 8.88 100 0 0 1 NA Whitelist ORCA-IN 0.41 1 0 0 0.33 0 No ORCA-IN OSCC-GB_012501 ORCA 0.55 2 Head-SCC NA 6 0.05 NA 2 ORCA-IN DO218180 OSCC-GB_012501 male alive C06.0 radiation therapy complete response 44 NA 616 Current smoker (includes daily smokers non-daily/occasional smokers) NA yes Daily Drinker Included Head-SCC ORCA IN 0 20.26 ORCA-IN::OSCC-GB_012601 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 2 121564542 121648670 1 1 4 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA 5 3 5 0.05 0.13 99.78 0 1 2 Whitelist ORCA-IN 0.62 0.54 NA NA 0.59 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 2 0.25 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 3 60510239 60595093 1 1 4 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 0.05 0.04 99.84 0 0 2 Whitelist ORCA-IN 0.62 0.49 NA NA 0.59 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 2 0.25 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 7 111162825 111191037 1 1 4 0 1 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 0.05 0 99.77 0 2 NA Whitelist ORCA-IN 0.62 0.42 NA NA 0.59 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 2 0.25 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 9 21866490 21994709 1 1 4 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 0.05 0.09 99.79 0 0 2 Whitelist ORCA-IN 0.62 0.35 NA NA 0.59 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 2 0.25 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 ORCA-IN::OSCC-GB_012601 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist ORCA-IN NA NA NA NA NA 0 No ORCA-IN OSCC-GB_012601 ORCA 0.16 2 Head-SCC NA 0 0 NA 2 ORCA-IN DO218211 OSCC-GB_012601 female alive C06.0 radiation therapy complete response 60 NA 228 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Head-SCC ORCA IN 0 7.5 OV-AU::AOCS-001 1 15057337 246806715 1 23 223 4 11 0 0 8 0 0.01 30 0 0 30 6 17 31 6 8 36.1 44.88 52.15 0 2 3 Whitelist OV-AU 0.33 0.04 0 0 0.01 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 38 0.09 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 2 96732954 203602492 1 4 223 1 3 0 0 0 0.11 0.63 5 0 0 5 3 5 10 5 5 36.1 1.55 98.36 0 2 1 Whitelist OV-AU 0.54 0.84 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 3 116165109 116878506 2 4 223 4 0 0 0 0 0.01 0.03 4 0 0 4 4 4 25 7 8 36.1 41.09 58.79 0 1 2 Whitelist OV-AU 0.21 0.12 0 0 0.16 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 4 11029264 182360804 1 14 223 4 4 0 0 6 0.05 0.28 10 0 0 10 6 10 12 6 6 36.1 60.57 39.34 1 2 1 Whitelist OV-AU 3 0.68 0.53 0 0 0.46 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 5 108126443 113494998 3 3 223 0 1 1 1 0 0.8 0.17 5 0 0 5 3 5 9 3 5 36.1 45.03 54.85 0 3 5 Whitelist OV-AU 0.87 0.38 0 0 0.84 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 6 4562721 168359786 1 12 223 2 3 0 0 7 0.14 0.57 12 0 0 12 6 12 13 6 6 36.1 50.87 49 0 2 1 Whitelist OV-AU 0.93 0.8 0 0 0.59 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 7 10701373 127613186 1 8 223 4 1 0 1 2 0.11 0.77 9 0 0 9 9 9 11 10 10 36.1 50.38 49.4 0 2 3 Whitelist OV-AU 0.62 0.93 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 8 26240151 135061191 1 8 223 0 3 0 1 4 0.11 0.76 9 0 0 9 5 9 10 5 5 36.1 70.37 29.56 0 4 3 Whitelist OV-AU 0.62 0.93 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 9 75613467 131028876 1 2 223 0 2 0 0 0 0.11 0.49 2 0 0 NA NA NA 4 3 3 36.1 18.81 80.49 0 2 3 Whitelist OV-AU 0.54 0.73 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 10 33755448 118615957 1 3 223 3 0 0 0 0 0.03 0.2 3 0 0 NA NA NA 4 3 3 36.1 0.22 99.6 0 2 1 Whitelist OV-AU 0.41 0.42 0 0 0.33 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 11 20322967 134538620 4 17 223 1 1 1 1 13 1 0 14 0 0 14 6 13 17 6 7 36.1 45.53 54.11 0 3 2 Whitelist OV-AU 6 0.99 0 0 0 1 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 21 0.05 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 12 6152033 107196461 1 6 223 1 2 0 0 3 0.3 0.53 7 0 0 7 3 7 8 3 3 36.1 47.58 52.34 0 1 2 Whitelist OV-AU 0.54 0.76 0 0 0.59 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 13 50609884 50645433 1 1 223 1 0 0 0 0 0.39 0.85 2 0 NA NA NA NA 6 3 3 36.1 27.95 72.05 0 0 2 Whitelist OV-AU 0.62 0.99 0 NA 0.59 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 14 39901158 40471373 1 2 223 1 1 0 0 0 0.57 0.12 2 0 0 NA NA NA 7 4 7 36.1 14.25 84.84 0 1 2 Whitelist OV-AU 0.68 0.31 0 0 0.64 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 15 40968724 90990230 1 2 223 0 2 0 0 0 0.11 1 4 0 0 4 4 4 5 5 5 36.1 0.06 99.81 0 2 3 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 16 2272114 88830990 1 4 223 1 2 0 0 1 0.3 1 5 0.01 0 5 4 5 6 4 4 36.1 25.28 74.63 0 1 2 Whitelist OV-AU 0.62 1 0.01 0 0.59 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 17 761337 58929232 1 6 223 1 3 0 0 2 0.11 0.68 7 0 0 7 4 5 8 4 4 36.1 50.53 49.45 0 2 1 Whitelist OV-AU 0.54 0.88 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 18 13175128 57004403 1 2 223 1 1 0 0 0 0.57 0.14 1 NA 0 NA NA NA NA NA NA 36.1 99.94 0 0 1 NA Whitelist OV-AU 0.68 0.34 NA 0 0.64 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 19 17364166 53205196 1 5 223 0 2 1 0 2 0.3 0.46 6 0 0 6 3 6 7 3 3 36.1 30.66 61.3 0 2 3 Whitelist OV-AU 0.93 0.7 0 0 0.59 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 20 NA NA 0 0 223 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.19 0 NA NA 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 21 NA NA 0 0 223 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.76 NA NA NA 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 22 17471562 47061342 1 7 223 1 0 1 0 5 0.57 0 5 0 0 5 3 5 5 3 3 36.1 0.67 99.33 0 2 1 Whitelist OV-AU 4 0.77 0.01 0 0 0.64 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-001 X 107705241 148350082 2 6 223 0 2 0 0 4 0.11 0.05 3 0 0 NA NA NA 13 3 3 36.1 45.04 54.73 0 2 3 Whitelist OV-AU 6 0.68 0.15 0 0 0.48 0 No OV-AU AOCS-001 OV 0.54 2.11 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_C_T,CN:1 2 OV-AU DO46325 AOCS-001 female deceased C48.2 54 477 477 NA Included Ovary-AdenoCA OV AU 1 15.69 OV-AU::AOCS-004 1 154004318 154028025 2 2 121 0 0 1 1 0 0.57 0.4 1 0 0 NA NA NA 9 3 3 49.57 99.91 0.09 0 3 NA Whitelist OV-AU 0.68 0.64 0 0 0.64 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 2 9312386 187363836 1 10 121 3 2 0 0 5 0.14 0.33 7 0 0 7 4 7 8 5 5 49.57 68.23 31.68 0 3 2 Whitelist OV-AU 0.62 0.58 0 0 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 15 0.06 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 3 162489827 163772525 3 3 121 1 1 0 1 0 0.8 0.01 7 0 0 7 3 7 17 7 10 49.57 96.92 0 13 6 5 Whitelist OV-AU 0.87 0.05 0 0 0.84 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 4 48826121 112734706 1 3 121 3 0 0 0 0 0.03 0.36 5 0 0 5 5 5 6 6 6 49.57 24.77 75.13 0 2 1 Whitelist OV-AU 0.41 0.61 0 0 0.33 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 5 1111208 129605699 1 5 121 3 0 1 1 0 0.28 0.45 6 0 0 6 4 6 6 4 4 49.57 25.41 71.78 0 2 3 Whitelist OV-AU 0.62 0.7 0 0 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 6 1407989 57371229 1 5 121 3 1 1 0 0 0.28 0.7 6 0 0 6 4 6 9 5 5 49.57 0.58 99.26 0 2 1 Whitelist OV-AU 0.62 0.9 0 0 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 7 42234236 131433330 1 6 121 2 1 1 0 2 0.57 0.16 6 0 0 6 5 6 8 5 5 49.57 99.76 0.04 0 3 4 Whitelist OV-AU 0.93 0.36 0 0 0.64 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 8 25228170 114295579 1 5 121 5 0 0 0 0 0 0.06 12 0 0 12 9 10 12 9 10 49.57 96.46 0 0 5 4 Whitelist OV-AU 0.1 0.18 0 0 0.07 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 9 20494777 90141320 1 3 121 2 0 0 0 1 0.11 0.64 7 NA 0 7 5 7 9 6 6 49.57 32.71 64.56 0 2 3 Whitelist OV-AU 0.62 0.85 NA 0 0.48 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 10 65210279 134857513 1 4 121 2 0 1 0 1 0.3 0.83 4 0 0 4 4 4 4 4 4 49.57 99.22 0.61 0 2 3 Whitelist OV-AU 0.68 0.97 0 0 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 11 34620698 132318283 1 6 121 1 1 0 0 4 0.57 0.51 10 0 0 10 6 8 11 6 8 49.57 58.39 37.78 0 4 5 Whitelist OV-AU 0.54 0.76 0 0 0.64 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 12 38005255 56920145 1 2 121 1 1 0 0 0 0.57 0.67 1 0 0 NA NA NA NA NA NA 49.57 0.46 99.52 0 2 NA Whitelist OV-AU 0.68 0.87 0 0 0.64 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 13 44809904 44823501 1 1 121 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 49.57 48.74 51.26 0 2 NA Whitelist OV-AU 0.62 0.69 NA NA 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 14 51129623 51183192 1 1 121 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 49.57 0 99.09 0 2 NA Whitelist OV-AU 0.62 0.41 NA NA 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 15 60666641 99628071 1 2 121 2 0 0 0 0 0.11 1 4 0 0 4 4 4 5 5 5 49.57 0.21 99.69 0 1 2 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 16 19859132 19913829 1 1 121 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 49.57 0.06 99.85 0 2 3 Whitelist OV-AU 0.62 0.63 NA NA 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 17 42229448 57547025 1 6 121 0 2 0 1 3 0.3 0.02 4 0 0 4 3 4 8 3 4 49.57 67.62 27.93 0 4 3 Whitelist OV-AU 11 0.68 0.07 0 0 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 18 3316082 5713128 1 3 121 1 0 1 1 0 0.8 1 3 0 0 NA NA NA 4 4 4 49.57 0.2 99.76 0 2 1 Whitelist OV-AU 0.87 1 0 0 0.84 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 19 22976221 49970011 1 9 121 3 1 1 1 3 0.57 0 12 0 0 12 3 4 14 3 3 49.57 46.38 46.34 0 3 12 Whitelist OV-AU 2 0.97 0 0 0 0.64 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 15 0.06 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 20 18183421 18349144 1 1 121 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 49.57 0.26 98.76 0 2 3 Whitelist OV-AU 0.62 0.76 NA NA 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 21 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 22 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-004 X 44853432 44878652 1 1 121 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 49.57 99.77 0 0 1 NA Whitelist OV-AU 0.62 0.54 NA NA 0.59 0 No OV-AU AOCS-004 OV 0.48 2.62 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-AU DO46327 AOCS-004 female deceased C56 54 184 184 NA Included Ovary-AdenoCA OV AU 1 6.05 OV-AU::AOCS-005 1 39408895 45738519 5 24 399 1 3 1 0 19 0.28 0 33 0 0 33 4 11 64 11 11 65.84 99.86 0.14 0 15 14 Whitelist OV-AU 13_18 0.76 0 0 0 0.59 1 Linked to high confidence OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA With other complex events 29 0.04 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 2 56662811 64436649 2 5 399 1 0 1 0 3 0.57 1 10 0 0 10 4 6 51 12 12 65.84 87.98 11.93 3 4 7 Whitelist OV-AU 0.93 1 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 3 148625989 171076671 3 5 399 0 2 1 0 2 0.3 0.17 21 0 0 21 4 6 47 5 7 65.84 54.23 42.39 0 4 5 Whitelist OV-AU 0.68 0.38 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 4 90656224 91193021 3 3 399 0 2 1 0 0 0.3 0.04 5 0 0 5 0 3 36 5 6 65.84 99.76 0.21 0 3 4 Whitelist OV-AU 0.62 0.15 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 5 20430059 40509628 3 6 399 2 0 0 1 3 0.3 0.84 13 0 0 13 7 13 32 10 10 65.84 22.19 75.15 0 3 2 Whitelist OV-AU 0.68 0.97 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 6 109475920 109661908 11 21 399 1 5 3 2 10 0.36 0 5 0 0 5 4 5 35 4 5 65.84 97.07 0 0 5 6 Whitelist OV-AU 0.54 0 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 32 0.04 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 7 9164936 109834740 1 12 399 3 1 1 1 6 0.57 0.27 19 0 0 19 6 8 23 6 6 65.84 65.19 32.26 0 3 2 Whitelist OV-AU 15 0.68 0.51 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 8 1430337 116594611 1 13 399 5 4 1 1 2 0.2 0.11 12 0 0 12 12 12 12 12 12 65.84 96.46 0 0 3 4 Whitelist OV-AU 0.54 0.28 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 24 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 9 117578418 117948797 4 4 399 2 2 0 0 0 0.26 0.7 4 0 0 4 3 4 21 4 7 65.84 78.12 21.76 0 5 3 Whitelist OV-AU 0.62 0.89 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 10 30499322 31046969 2 2 399 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 28 7 7 65.84 35.51 61.04 0 5 6 Whitelist OV-AU 0.68 0.07 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 11 55166547 56269512 2 8 399 1 0 0 1 6 0.57 0.09 1 0 0 NA NA NA 21 5 7 65.84 83.84 15.58 0 3 NA Whitelist OV-AU 0.62 0.26 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 12 33047050 130036075 1 9 399 2 3 0 0 4 0.14 0.07 7 0 0 7 5 7 9 5 6 65.84 99.92 0 0 4 5 Whitelist OV-AU 0.54 0.22 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 13 39444113 99719017 4 11 399 2 1 1 0 7 0.57 0.01 16 0 0 16 6 6 26 6 6 65.84 40.06 59.94 1 2 3 Whitelist OV-AU 5 0.62 0.04 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 14 21152180 21708937 3 3 399 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 34 11 11 65.84 18.08 66.01 0 2 3 Whitelist OV-AU 0.87 0 0 0 0.84 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 15 37006957 98552779 2 15 399 3 1 0 0 11 0.11 0.09 16 0 0 16 9 12 17 10 10 65.84 23.68 76.19 0 2 3 Whitelist OV-AU 7 0.73 0.25 0 0 0.48 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 16 23377275 72724017 1 6 399 1 0 1 0 4 0.57 0.53 11 0 0 11 4 7 16 4 7 65.84 64.94 29.83 4 3 2 Whitelist OV-AU 18 0.93 0.76 0 0 0.64 1 Linked to high confidence OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA With other complex events 8 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 17 983530 73687401 1 5 399 0 3 0 1 1 0.11 0.09 6 0 0 6 5 6 7 5 5 65.84 53.93 46.06 0 3 4 Whitelist OV-AU 0.45 0.24 0 0 0.48 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 18 56378430 67139124 27 49 399 8 7 8 4 22 0.66 0 48 0 0 48 10 17 60 10 17 65.84 37.98 61.98 2 4 5 Whitelist OV-AU 1 0 0 0 0.74 1 High confidence OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA With other complex events 76 0.1 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 19 30090946 31115971 4 10 399 0 4 0 0 6 0.01 0 16 0 0 16 3 6 39 3 3 65.84 26.74 73.09 0 20 14 Whitelist OV-AU 13_5 0.47 0 0 0 0.16 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 20 NA NA 0 0 399 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.37 NA NA NA 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 21 36312318 39316738 1 3 399 1 0 0 0 2 0.39 0.35 4 0 0 4 0 3 9 0 3 65.84 44.91 32.45 0 1 5 Whitelist OV-AU 0.62 0.61 0 0 0.59 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 22 NA NA 0 0 399 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.27 NA NA NA 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-005 X 46017640 46032500 2 2 399 0 0 1 1 0 0.57 0.07 3 0 0 NA NA NA 14 3 3 65.84 70.46 29.54 0 2 11 Whitelist OV-AU 0.68 0.2 0 0 0.64 1 No OV-AU AOCS-005 OV 0.71 3.06 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:2 4 OV-AU DO46328 AOCS-005 female deceased C56 52 972 972 NA Included Ovary-AdenoCA OV AU 1 31.97 OV-AU::AOCS-034 1 115756180 243690204 2 6 308 0 0 1 1 4 0.57 0.4 16 0 0 16 8 16 31 8 8 51.47 26.55 73.45 0 3 2 Whitelist OV-AU 2 0.93 0.64 0 0 0.64 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 2 43382931 228657976 1 13 308 4 4 0 0 5 0.05 0.54 11 0 0 11 7 9 12 7 7 51.47 16.6 83.31 0 2 1 Whitelist OV-AU 1_4 0.54 0.77 0 0 0.46 1 Linked to high confidence OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA Canonical without polyploidization 21 0.03 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 3 16351517 37775104 2 5 308 0 0 1 1 3 0.57 0.66 2 0 0 NA NA NA 4 0 4 51.47 79.93 19.95 0 1 2 Whitelist OV-AU 4 0.93 0.86 0 0 0.64 1 Linked to high confidence OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA With other complex events 7 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 4 77772 43781007 43 47 308 6 12 12 13 4 0.41 0 66 0 0 66 49 66 73 50 50 51.47 64.3 35.69 0 3 2 Whitelist OV-AU 2_7 0.68 0 0 0 0.62 1 High confidence OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA Canonical without polyploidization 90 0.15 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 5 70994893 148830446 1 3 308 0 3 0 0 0 0.03 0.72 6 0 0 6 6 6 16 12 12 51.47 77.97 19.26 0 1 2 Whitelist OV-AU 0.41 0.9 0 0 0.33 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 6 45376244 90904883 1 4 308 0 2 0 0 2 0.11 0.81 2 0 0 NA NA NA 10 3 6 51.47 32.93 66.94 0 2 3 Whitelist OV-AU 0.68 0.96 0 0 0.48 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 7 25135946 121567351 1 6 308 2 1 0 1 2 0.57 0.8 7 0 0 7 5 7 8 5 5 51.47 26.67 73.1 0 2 1 Whitelist OV-AU 4 0.62 0.95 0 0 0.64 1 Linked to high confidence OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA Canonical without polyploidization 10 0.02 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 8 40841305 107771645 2 8 308 1 1 0 0 6 0.57 0 10 0 0 10 7 10 16 7 7 51.47 71.17 28.5 0 3 4 Whitelist OV-AU 0.54 0.02 0 0 0.64 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 9 82898395 130353685 1 2 308 0 2 0 0 0 0.11 0.04 2 0 0 NA NA NA 4 3 3 51.47 98.68 1.15 0 1 2 Whitelist OV-AU 0.54 0.13 0 0 0.48 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 10 206266 122815167 1 6 308 0 4 0 0 2 0.01 0.22 3 0 0 NA NA NA 4 4 4 51.47 77.25 22.57 0 2 1 Whitelist OV-AU 0.54 0.45 0 0 0.16 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 11 30334929 126433190 3 9 308 0 0 1 2 6 0.3 0.03 12 0 0 12 5 8 16 5 8 51.47 65.17 34.27 0 3 5 Whitelist OV-AU 1 0.62 0.11 0 0 0.59 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 12 117328378 121321202 3 3 308 1 0 1 1 0 0.8 0.01 6 0 0 6 4 6 14 7 7 51.47 14.8 85.12 0 2 1 Whitelist OV-AU 0.87 0.06 0 0 0.84 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 13 38743944 38791980 1 1 308 0 1 0 0 0 0.39 0.21 1 0 NA NA NA NA NA NA NA 51.47 39.18 60.82 0 1 NA Whitelist OV-AU 0.62 0.43 0 NA 0.59 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 14 104254236 104346876 1 1 308 0 0 1 0 0 0.39 0.51 2 0 NA NA NA NA 7 5 6 51.47 96.2 0.09 0 1 2 Whitelist OV-AU 0.62 0.75 0 NA 0.59 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 15 59049384 59066260 1 1 308 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 51.47 99.98 0.02 0 1 2 Whitelist OV-AU 0.62 0.06 NA NA 0.59 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 16 20934187 67111147 1 3 308 0 2 0 0 1 0.11 0.37 3 0 0 NA NA NA 4 3 3 51.47 57.12 38.13 0 1 2 Whitelist OV-AU 0.62 0.62 0 0 0.48 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 17 26541230 38713746 1 2 308 0 2 0 0 0 0.11 0.6 2 0 0 NA NA NA 6 5 6 51.47 45.07 48.45 0 1 2 Whitelist OV-AU 0.54 0.81 0 0 0.48 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 18 20377168 71912384 1 3 308 0 3 0 0 0 0.03 0.16 6 0 0 6 6 6 7 7 7 51.47 60.26 39.71 0 1 2 Whitelist OV-AU 0.41 0.36 0 0 0.33 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 19 5165869 19738287 1 4 308 0 3 0 0 1 0.03 0.14 2 0 0 NA NA NA 6 3 5 51.47 21.71 78.12 0 1 2 Whitelist OV-AU 1 0.54 0.34 0 0 0.33 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 20 14211493 33044732 1 6 308 0 4 0 0 2 0.01 0.11 3 0 0 NA NA NA 6 4 4 51.47 9.42 89.61 0 2 3 Whitelist OV-AU 0.54 0.28 0 0 0.16 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 21 15990381 34129207 1 4 308 0 2 0 0 2 0.11 0.11 2 0 0 NA NA NA 4 3 3 51.47 7.78 69.95 0 2 3 Whitelist OV-AU 0.54 0.28 0 0 0.48 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 22 NA NA 0 0 308 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.67 0 NA NA 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-034 X NA NA 0 0 308 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 0 NA NA 1 No OV-AU AOCS-034 OV 0.79 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578518_G_C,CN:2 2 OV-AU DO46329 AOCS-034 female deceased C56 52 1699 1699 NA Included Ovary-AdenoCA OV AU 1 55.89 OV-AU::AOCS-055 1 41750281 105466549 5 12 362 1 2 1 1 7 0.9 0 22 0 0 22 4 6 67 5 6 84.69 97.02 0 8 8 9 Whitelist OV-AU 16 0.83 0 0 0 0.92 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 2 111571682 169837871 2 2 362 2 0 0 0 0 0.11 0.71 8 0 0 8 6 8 28 7 7 84.69 99.88 0 0 4 3 Whitelist OV-AU 0.54 0.9 0 0 0.48 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 3 175019940 175227895 3 3 362 1 2 0 0 0 0.3 0.08 2 0 0 NA NA NA 37 8 8 84.69 96.82 0.04 0 6 7 Whitelist OV-AU 0.62 0.23 0 0 0.59 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 4 92637565 93003618 2 2 362 1 0 1 0 0 0.57 0.46 4 0 0 4 3 4 29 5 5 84.69 97.68 2.03 0 2 1 Whitelist OV-AU 0.68 0.7 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 5 56129189 56188336 2 2 362 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 15 5 6 84.69 96.53 0.46 1 2 3 Whitelist OV-AU 0.68 0.01 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 6 32076541 32256283 2 3 362 1 1 0 0 1 0.57 0.82 5 0 0 5 3 5 28 10 10 84.69 99.85 0 0 6 4 Whitelist OV-AU 0.62 0.96 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 7 567398 57567811 13 14 362 4 2 4 3 1 0.84 0.13 25 0 0 25 12 25 41 12 12 84.69 97.18 0 1 5 6 Whitelist OV-AU 0.98 0.32 0 0 0.88 1 High confidence OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA With other complex events 27 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 8 27535581 111686516 1 15 362 2 1 0 2 10 0.53 0.4 18 0 0 18 5 14 21 5 5 84.69 90.85 5.49 0 3 4 Whitelist OV-AU 0.73 0.65 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 9 14122652 125129718 1 6 362 2 2 0 1 1 0.53 0.22 16 0 0 16 5 16 17 5 5 84.69 41.56 57.78 0 3 2 Whitelist OV-AU 0.93 0.45 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 10 31804023 119282466 1 10 362 1 3 1 3 2 0.57 0.45 23 0 0 23 4 5 23 4 5 84.69 96.47 0 4 6 5 Whitelist OV-AU 0.86 0.69 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 11 110892736 128415752 4 5 362 0 1 1 2 1 0.57 0.06 9 0 0 9 9 9 16 16 16 84.69 99.41 0 0 4 3 Whitelist OV-AU 0.62 0.19 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 12 20329037 121257964 2 7 362 0 1 1 0 5 0.57 0.62 15 0 0 15 4 7 19 5 5 84.69 82.21 17.71 5 3 5 Whitelist OV-AU 7 0.96 0.83 0 0 0.64 1 Linked to high confidence OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA With other complex events 9 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 13 33173519 66028702 1 6 362 3 0 1 0 2 0.11 0.15 5 0 0 5 5 5 8 7 8 84.69 94.1 3 0 2 3 Whitelist OV-AU 9 0.68 0.35 0 0 0.48 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 14 33462314 95525238 1 16 362 5 4 0 1 6 0.08 0.01 19 0 0 19 4 15 24 4 4 84.69 51.17 44.74 0 2 3 Whitelist OV-AU 20 0.79 0.04 0 0 0.48 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 26 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 15 20556922 90596786 1 8 362 1 2 0 0 5 0.3 0.52 7 0 0 7 4 5 7 4 4 84.69 100 0 0 3 4 Whitelist OV-AU 8 0.62 0.76 0 0 0.59 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 16 587794 53822627 1 7 362 0 2 0 0 5 0.11 1 6 0 0 6 6 6 10 7 9 84.69 8.51 86.5 0 2 3 Whitelist OV-AU 0.68 1 0 0 0.48 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 17 48427578 48623218 2 2 362 1 1 0 0 0 0.57 0 2 0 0 NA NA NA 20 4 7 84.69 63.39 36.49 0 3 4 Whitelist OV-AU 0.68 0.02 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 18 NA NA 0 0 362 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.01 NA NA NA 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 19 32469607 40919792 6 21 362 2 2 1 1 15 0.88 0 34 0 0 34 3 5 67 6 6 84.69 77.42 15.3 1 22 26 Whitelist OV-AU 16 0.76 0 0 0 0.91 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 27 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 20 35314063 45568110 2 6 362 2 1 0 1 2 0.57 0.02 8 0 0 8 5 8 16 5 10 84.69 99.04 0 1 6 7 Whitelist OV-AU 0.93 0.07 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 21 46585002 46996019 4 6 362 0 2 1 1 2 0.57 0 3 0 0 NA NA NA 6 3 4 84.69 77.35 0 0 3 4 Whitelist OV-AU 20 0.62 0.01 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 22 23768835 33032433 1 2 362 0 1 1 0 0 0.57 0.81 4 0 0 4 3 4 9 3 4 84.69 88.89 0 0 4 6 Whitelist OV-AU 0.68 0.95 0 0 0.64 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-055 X 6925997 129347992 1 14 362 10 2 0 0 2 0 0.81 24 0 0 24 4 9 25 5 9 84.69 99.28 0.72 1 3 4 Whitelist OV-AU 0.01 0.96 0 0 0.01 1 No OV-AU AOCS-055 OV 0.5 4.18 Ovary-AdenoCA NA 26 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:3 3 OV-AU DO46330 AOCS-055 female deceased C56 60 684 684 NA Included Ovary-AdenoCA OV AU 1 22.5 OV-AU::AOCS-056 1 31477944 31534796 1 1 110 1 0 0 0 0 0.39 0.11 1 0 NA NA NA NA NA NA NA 38.08 0.06 99.62 0 2 NA Whitelist OV-AU 0.62 0.29 0 NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 2 136711956 158618733 3 3 110 0 1 2 0 0 0.3 0.86 2 0 0 NA NA NA 7 5 5 38.08 4.63 95.26 0 1 2 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 3 61486174 61576319 1 1 110 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 38.08 32.14 67.73 0 1 2 Whitelist OV-AU 0.62 0.25 NA NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 4 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 5 12779093 128584441 1 8 110 1 0 0 1 6 0.57 0.07 2 0 0 NA NA NA NA NA NA 38.08 38.82 61.06 0 2 3 Whitelist OV-AU 7_8 0.62 0.21 0 0 0.64 1 Linked to high confidence OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA With other complex events 10 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 6 143394488 143534651 1 1 110 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 38.08 0 99.85 0 2 NA Whitelist OV-AU 0.62 0.2 NA NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 7 17444109 50572373 1 5 110 0 1 0 1 3 0.57 0.39 7 0 0 7 5 5 10 5 8 38.08 18.46 78.9 0 2 3 Whitelist OV-AU 0.93 0.64 0 0 0.64 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 8 35777050 145916683 3 9 110 0 3 1 2 3 0.34 0 23 0 0 23 7 11 24 7 11 38.08 87.77 8.72 0 3 2 Whitelist OV-AU 0.54 0 0 0 0.59 1 High confidence OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA With other complex events 15 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 9 17195599 99159650 1 3 110 2 1 0 0 0 0.3 0.8 3 0 0 NA NA NA NA NA NA 38.08 99.85 0 0 1 0 Whitelist OV-AU 0.62 0.95 0 0 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 10 32819793 36416680 1 1 110 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 38.08 0 99.82 0 2 NA Whitelist OV-AU 0.62 0.49 NA NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 11 98578318 132218401 1 4 110 2 1 0 0 1 0.3 1 3 0 0 NA NA NA 6 4 4 38.08 88.61 7.32 0 4 3 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 12 4676598 126027296 5 6 110 1 1 1 2 1 0.9 0 17 0 0 17 3 5 25 3 5 38.08 22.68 73.58 0 2 3 Whitelist OV-AU 0.93 0 0 0 0.92 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 11 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 13 30088589 69634973 1 2 110 2 0 0 0 0 0.11 0.59 2 NA 0 NA NA NA NA NA NA 38.08 0.05 99.95 0 1 2 Whitelist OV-AU 0.54 0.81 NA 0 0.48 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 14 66329039 66541826 1 1 110 1 0 0 0 0 0.39 0.78 2 0 NA NA NA NA 7 3 4 38.08 11.88 87.21 0 1 2 Whitelist OV-AU 0.62 0.94 0 NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 15 42214621 75781873 7 8 110 2 1 2 2 1 0.93 0 8 0 0 8 0 6 8 0 0 38.08 28.99 71.01 0 2 3 Whitelist OV-AU 0.87 0.01 0 0 0.95 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 15 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 16 24531439 24551961 1 1 110 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.08 45.92 54.07 0 2 NA Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 17 NA NA 0 0 110 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.63 NA NA NA 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 18 NA NA 0 0 110 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.93 NA NA NA 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 19 57690711 58074728 1 1 110 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 4 5 38.08 42.6 49.47 0 2 3 Whitelist OV-AU 0.62 0.03 0 NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 20 3873932 46378466 1 1 110 0 0 0 1 0 0.39 0 10 0 0 10 3 6 11 3 3 38.08 34.35 64.65 0 1 2 Whitelist OV-AU 0.62 0.02 0 0 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 21 NA NA 0 0 110 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 22 28830025 28859909 1 1 110 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.08 100 0 0 1 NA Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-056 X NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-056 OV 0.86 1.96 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-AU DO46331 AOCS-056 female deceased C48.2 72 612 612 NA Included Ovary-AdenoCA OV AU 1 20.13 OV-AU::AOCS-058 1 10784991 181696245 1 13 243 2 3 1 0 7 0.34 0.23 10 0 0 10 4 10 11 5 5 42.57 28.9 71.09 0 2 3 Whitelist OV-AU 0.62 0.47 0 0 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 2 9718712 205223727 1 8 243 4 2 0 0 2 0.06 0.25 10 0 0 10 8 10 11 9 9 42.57 36.2 63.69 0 2 1 Whitelist OV-AU 0.54 0.49 0 0 0.48 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 3 13183685 180289213 1 10 243 0 6 0 0 4 0 0.1 6 0 0 6 4 6 6 4 4 42.57 37.2 59.66 0 2 3 Whitelist OV-AU 0.07 0.27 0 0 0.03 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 4 19768980 47652511 4 8 243 1 2 0 1 4 0.57 0.31 9 0 0 9 9 9 21 21 21 42.57 87.69 9.55 0 1 2 Whitelist OV-AU 21 0.62 0.55 0 0 0.64 1 High confidence OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA Canonical without polyploidization 12 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 5 49456332 128133079 1 3 243 1 2 0 0 0 0.3 0.06 5 0 0 5 5 5 8 7 7 42.57 43.15 54.18 0 2 1 Whitelist OV-AU 0.62 0.19 0 0 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 6 47899152 49594093 2 2 243 0 1 0 1 0 0.57 0.34 1 0 0 NA NA NA 9 6 6 42.57 46.55 53.32 0 2 NA Whitelist OV-AU 0.68 0.59 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 7 12369986 102987019 1 11 243 1 3 2 0 5 0.34 0 10 0 0 10 5 10 15 5 5 42.57 62.57 37.21 0 2 3 Whitelist OV-AU 12 0.68 0.02 0 0 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 8 4366813 4516949 2 2 243 1 1 0 0 0 0.57 0.46 3 0 0 NA NA NA 11 4 4 42.57 63.09 36.75 0 1 2 Whitelist OV-AU 0.68 0.71 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 9 81616416 89743600 2 2 243 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 12 6 6 42.57 26.14 73.24 0 2 3 Whitelist OV-AU 0.68 0.01 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 10 52996025 131984755 1 7 243 0 3 1 0 3 0.11 0.76 9 0 0 9 3 4 10 4 4 42.57 60.3 36.24 0 2 1 Whitelist OV-AU 0.47 0.92 0 0 0.48 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 11 69467873 86439875 2 2 243 1 1 0 0 0 0.57 0.03 6 0 0 6 5 6 20 5 5 42.57 37.06 62.51 0 2 1 Whitelist OV-AU 0.68 0.11 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 12 53338123 108854379 1 10 243 1 2 1 1 5 0.9 0.28 10 0 0 10 8 10 10 8 8 42.57 19.81 80.1 0 2 1 Whitelist OV-AU 7 0.62 0.53 0 0 0.92 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 13 33615930 49188967 1 2 243 1 1 0 0 0 0.57 0.07 2 0 0 NA NA NA 4 3 3 42.57 23.65 76.35 0 2 4 Whitelist OV-AU 0.68 0.22 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 14 62151966 78753644 2 3 243 0 0 1 1 1 0.57 0.01 5 0 0 5 3 5 11 9 9 42.57 28.72 70.36 0 2 1 Whitelist OV-AU 0.62 0.06 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 15 25666994 102394785 1 12 243 1 5 0 0 6 0.01 0.03 8 0 0 8 5 8 9 5 5 42.57 20.29 79.58 0 2 1 Whitelist OV-AU 4 0.62 0.1 0 0 0.19 1 Linked to high confidence OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA Canonical without polyploidization 18 0.04 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 16 15711459 72524833 1 3 243 0 1 0 1 1 0.57 0.23 1 NA 0 NA NA NA NA NA NA 42.57 0 99.91 0 2 NA Whitelist OV-AU 0.62 0.46 NA 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 17 5049385 5060486 1 2 243 0 0 1 0 1 0.39 0.69 2 0 NA NA NA NA NA NA NA 42.57 93.77 6.2 0 1 2 Whitelist OV-AU 0.68 0.89 0 NA 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 18 28402117 40030389 1 2 243 0 1 0 1 0 0.57 1 3 0 0 NA NA NA 8 3 3 42.57 5.44 89.92 0 2 3 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 19 32848618 44721896 1 3 243 0 2 0 0 1 0.11 0.82 1 0 0 NA NA NA NA NA NA 42.57 15.43 84.39 0 2 NA Whitelist OV-AU 0.62 0.96 0 0 0.48 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 20 36107405 36118894 1 1 243 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 5 4 5 42.57 14.39 85.26 0 2 NA Whitelist OV-AU 0.62 1 0 NA 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 21 31989442 43599047 4 8 243 2 0 1 1 4 0.57 0 13 0 0 13 5 13 16 5 5 42.57 19.59 57.76 0 2 1 Whitelist OV-AU 4 1 0 0 0 0.64 1 Linked to high confidence OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA With other complex events 12 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 22 17452094 17947993 1 2 243 0 1 0 1 0 0.57 0.54 2 0 0 NA NA NA 4 0 0 42.57 92.75 7.25 0 4 5 Whitelist OV-AU 0.68 0.77 0 0 0.64 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-058 X 98368607 98395181 1 1 243 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 7 5 5 42.57 99.75 0.02 0 1 2 Whitelist OV-AU 0.62 0.05 0 NA 0.59 1 No OV-AU AOCS-058 OV 0.83 1.8 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578449_T_C,CN:1 2 OV-AU DO46333 AOCS-058 female deceased C56 58 359 359 NA Included Ovary-AdenoCA OV AU 1 11.81 OV-AU::AOCS-059 1 211239044 211273436 1 1 43 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA 8 5 6 72.44 96.7 0.26 0 4 5 Whitelist OV-AU 0.62 0.5 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 2 96855733 109464826 2 2 43 0 0 1 1 0 0.57 1 4 0 0 4 4 4 7 5 7 72.44 99.72 0.19 0 2 4 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 3 115498789 115615638 1 1 43 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 72.44 96.78 0 0 5 6 Whitelist OV-AU 0.62 0.62 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 4 59025114 87706159 1 3 43 0 0 1 1 1 0.57 0.07 5 0 0 5 4 5 12 6 7 72.44 91.17 8.73 0 3 5 Whitelist OV-AU 0.62 0.2 0 0 0.64 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 5 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 5 7886030 12756524 1 2 43 0 1 0 0 1 0.39 0.34 3 0.01 NA NA NA NA 9 4 4 72.44 97.31 0 0 5 6 Whitelist OV-AU 0.54 0.6 0.01 NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 3 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 6 127184090 127236862 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 72.44 21.87 77.98 0 2 3 Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 8 55271991 55302342 1 1 43 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA 6 4 6 72.44 71.86 28.13 1 3 4 Whitelist OV-AU 0.62 0.52 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 9 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 11 3827653 3866591 1 1 43 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 3 3 72.44 58.36 37.57 0 1 2 Whitelist OV-AU 0.62 0.9 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 12 41936470 43563838 1 3 43 0 0 1 1 1 0.57 0.05 5 0 0 5 5 5 10 8 8 72.44 85.24 11.02 0 3 2 Whitelist OV-AU 0.62 0.16 0 0 0.64 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 5 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 17 37749894 37831666 1 1 43 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 7 4 4 72.44 48.41 51.57 0 1 2 Whitelist OV-AU 0.62 0.58 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 18 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 19 7159079 17180659 11 12 43 1 4 3 3 1 0.63 0 31 0 0 31 7 7 32 7 7 72.44 84.89 14.93 11 7 3 Whitelist OV-AU 0.93 0 0 0 0.71 1 High confidence OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA With other complex events 23 0.27 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 20 30247866 30385823 1 1 43 0 1 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 72.44 91.01 0 0 4 5 Whitelist OV-AU 0.62 0.82 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 22 39709207 39768476 1 1 43 0 1 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 72.44 0.12 99.88 0 2 3 Whitelist OV-AU 0.62 0.65 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-059 X 21377680 21428510 1 1 43 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 72.44 99.77 0 0 1 NA Whitelist OV-AU 0.62 0.9 NA NA 0.59 1 No OV-AU AOCS-059 OV 0.47 2.94 Ovary-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46334 AOCS-059 female deceased C48.2 77 496 496 NA Included Ovary-AdenoCA OV AU 1 16.32 OV-AU::AOCS-060 1 45912150 46972000 2 2 197 0 0 1 1 0 0.57 0.89 2 0 0 NA NA NA 24 8 9 61.17 96.54 0.36 0 3 4 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 2 10818291 71241962 3 3 197 1 0 1 1 0 0.8 0.9 6 0 0 6 3 5 22 9 12 61.17 91.54 5.77 0 6 5 Whitelist OV-AU 0.87 1 0 0 0.84 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 3 721690 195014231 1 13 197 3 0 0 1 9 0.11 0.68 17 0 0 17 7 13 18 7 7 61.17 80.88 15.71 0 3 2 Whitelist OV-AU 12 0.62 0.88 0 0 0.48 0 Linked to low confidence OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA With other complex events 17 0.04 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 4 3137564 56050367 4 5 197 1 1 1 1 1 1 0.32 16 0 0 16 4 4 19 4 4 61.17 16.72 80.92 0 3 4 Whitelist OV-AU 0.93 0.57 0 0 1 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 5 113500642 113771962 1 1 197 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 5 3 3 61.17 42.26 55.08 0 2 NA Whitelist OV-AU 0.62 0.05 0 NA 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 6 2397261 138806551 1 11 197 5 3 0 1 2 0.09 0.88 16 0 0 16 6 15 18 6 6 61.17 99.41 0.44 0 3 2 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 7 20054733 106544450 1 5 197 2 1 0 0 2 0.3 0.34 13 0 0 13 4 5 18 7 7 61.17 45.96 51.3 0 2 3 Whitelist OV-AU 0.68 0.59 0 0 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 8 34955549 139173410 9 23 197 1 4 2 2 14 0.55 0 36 0 0 36 4 6 37 4 5 61.17 95.26 0.89 2 8 3 Whitelist OV-AU 19_3 0.79 0 0 0 0.64 0 Low confidence OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA With other complex events 32 0.08 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 9 125661794 125684988 1 1 197 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 7 4 6 61.17 59.2 40.38 0 3 NA Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 10 114360543 114375877 2 2 197 0 0 1 1 0 0.57 0.61 3 0 0 NA NA NA 6 3 5 61.17 88.36 8.21 0 3 1 Whitelist OV-AU 0.68 0.82 0 0 0.64 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 11 108459249 108517461 3 4 197 0 0 2 1 1 0.3 0 6 0 0 6 5 6 30 8 9 61.17 97.28 2.3 4 7 8 Whitelist OV-AU 0.62 0 0 0 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 12 27164830 104647583 1 14 197 3 0 2 3 6 0.39 0 17 0 0 17 8 17 19 10 10 61.17 87.8 8.45 9 3 4 Whitelist OV-AU 3 0.68 0.02 0 0 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 22 0.06 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 13 NA NA 0 0 197 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.22 NA NA NA 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 14 20530012 20602330 2 2 197 1 0 1 0 0 0.57 0.04 4 0 0 4 4 4 15 4 4 61.17 11.59 69.34 0 8 19 Whitelist OV-AU 0.68 0.13 0 0 0.64 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 15 NA NA 0 0 197 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 16 89484290 89516585 1 2 197 0 0 1 0 1 0.39 1 2 0.11 NA NA NA NA 5 3 3 61.17 0.33 98.64 0 1 3 Whitelist OV-AU 0.68 1 0.11 NA 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 17 NA NA 0 0 197 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.4 NA NA NA 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 18 20093343 23209135 1 2 197 0 1 0 0 1 0.39 0.18 3 NA NA NA NA NA 5 3 3 61.17 5.39 89.96 0 2 3 Whitelist OV-AU 0.68 0.4 NA NA 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 19 10867230 47792770 1 19 197 1 1 0 2 15 0.57 0 20 0 0 20 5 7 23 7 7 61.17 40.42 52.26 2 3 8 Whitelist OV-AU 0.62 0 0 0 0.64 0 Linked to low confidence OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA With other complex events 23 0.06 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 20 6374212 49582759 1 8 197 0 0 0 3 5 0.03 0.04 11 0 0 11 4 7 12 4 5 61.17 74.94 24.09 0 3 2 Whitelist OV-AU 0.62 0.14 0 0 0.33 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 21 NA NA 0 0 197 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.91 NA NA NA 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 22 46592199 47221242 1 1 197 0 1 0 0 0 0.39 0.3 2 0 NA NA NA NA 6 4 4 61.17 16.66 83.34 0 1 2 Whitelist OV-AU 0.62 0.55 0 NA 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-060 X 301789 47084015 1 6 197 2 0 2 0 2 0.26 0.19 10 0 0 10 5 7 12 5 6 61.17 29.02 67.48 2 1 2 Whitelist OV-AU 0.68 0.41 0 0 0.59 0 No OV-AU AOCS-060 OV 0.68 2.95 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578517_A_G,CN:3 4 OV-AU DO46336 AOCS-060 female deceased C57 70 664 664 NA Included Ovary-AdenoCA OV AU 1 21.84 OV-AU::AOCS-061 1 7717591 203839214 2 4 177 0 0 1 1 2 0.57 1 18 0 0 18 5 5 18 5 5 71.02 98.24 1.76 0 3 4 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 2 6762637 83975251 1 2 177 1 1 0 0 0 0.57 0.01 6 0 0 6 4 6 8 5 5 71.02 99.9 0 0 4 3 Whitelist OV-AU 0.68 0.06 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 3 71035688 172173329 1 8 177 3 3 1 0 1 0.28 0.77 6 0 0 6 4 6 7 4 5 71.02 99.95 0 0 5 6 Whitelist OV-AU 0.62 0.93 0 0 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 4 19792816 162070739 1 4 177 2 1 0 0 1 0.3 0.01 6 0.22 0 6 5 6 7 5 5 71.02 99.8 0.17 0 3 2 Whitelist OV-AU 0.68 0.06 0.22 0 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 5 NA NA 0 0 177 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.01 NA NA NA 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 6 65190142 115654225 4 15 177 1 0 2 1 11 0.57 0 27 0 0 27 4 4 39 7 7 71.02 41.28 58.58 3 2 6 Whitelist OV-AU 0.93 0 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 7 1890659 2072635 1 1 177 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 71.02 61.14 36.31 0 1 2 Whitelist OV-AU 0.62 0.03 NA NA 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 8 92712766 144706269 1 2 177 1 0 0 1 0 0.57 0.12 4 0 0 4 0 3 4 0 3 71.02 99.99 0 0 2 4 Whitelist OV-AU 0.68 0.3 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 9 NA NA 0 0 177 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 10 73614871 73864309 1 1 177 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 71.02 99.83 0 0 3 4 Whitelist OV-AU 0.62 0.08 NA NA 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 11 13468015 126150657 1 5 177 1 4 0 0 0 0.04 0.59 10 0 0 10 10 10 11 11 11 71.02 99.57 0 0 3 4 Whitelist OV-AU 0.45 0.81 0 0 0.36 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 12 19833454 32215057 5 5 177 1 1 2 1 0 0.9 0.21 10 0 0 10 4 4 17 4 7 71.02 99.88 0.04 7 3 5 Whitelist OV-AU 0.93 0.43 0 0 0.92 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 13 56824637 107327632 1 2 177 2 0 0 0 0 0.11 0.3 3 NA 0 NA NA NA 5 3 3 71.02 99.97 0.03 0 2 3 Whitelist OV-AU 0.54 0.54 NA 0 0.48 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 14 72861803 73424701 1 1 177 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 71.02 99.35 0 0 3 4 Whitelist OV-AU 0.62 0.41 NA NA 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 15 NA NA 0 0 177 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 16 70492415 85454059 1 2 177 0 1 0 1 0 0.57 0.64 4 NA 0 4 4 4 6 5 5 71.02 94.55 5.04 0 3 4 Whitelist OV-AU 0.68 0.85 NA 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 17 19641884 21035700 5 10 177 2 1 2 0 5 0.53 0 16 0 0 16 3 5 26 6 6 71.02 4.05 91.15 0 8 4 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 18 22087376 64135977 1 7 177 2 2 1 0 2 0.53 0.06 10 0 0 10 3 5 11 3 5 71.02 43.35 56.61 0 2 5 Whitelist OV-AU 0.62 0.18 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 19 29415891 40712326 13 14 177 3 6 2 2 1 0.35 0 34 0 0 34 4 5 52 5 6 71.02 53.31 38.43 0 4 6 Whitelist OV-AU 0.62 0 0 0 0.59 0 Low confidence OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA With other complex events 27 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 20 2541300 52170367 1 7 177 2 2 0 0 3 0.26 0.02 13 0 0 13 7 8 13 7 7 71.02 98.73 0.3 0 2 3 Whitelist OV-AU 0.62 0.06 0 0 0.59 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 21 NA NA 0 0 177 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 22 28737868 30746725 1 2 177 0 2 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 71.02 0.28 99.72 0 2 3 Whitelist OV-AU 0.54 1 NA 0 0.48 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-061 X 96208645 107791902 2 2 177 1 0 0 1 0 0.57 0.09 2 0 0 NA NA NA 13 5 5 71.02 99.45 0.32 0 3 5 Whitelist OV-AU 0.68 0.24 0 0 0.64 0 No OV-AU AOCS-061 OV 0.88 3.14 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46338 AOCS-061 female deceased C56 59 596 596 NA Included Ovary-AdenoCA OV AU 1 19.61 OV-AU::AOCS-063 1 12414904 210611339 1 7 146 3 0 1 0 3 0.11 0.44 7 0 0 7 7 7 7 7 7 30.28 0.06 99.94 0 2 1 Whitelist OV-AU 0.62 0.69 0 0 0.48 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 11 0.04 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 2 79591923 155479608 1 4 146 1 1 0 0 2 0.57 0.05 5 0 0 5 3 5 7 3 3 30.28 13.33 86.55 2 2 1 Whitelist OV-AU 0.68 0.17 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 6 0.02 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 3 8996520 147894233 1 2 146 1 0 0 1 0 0.57 0.05 6 0 0 6 5 6 7 6 6 30.28 29.82 70.14 0 2 1 Whitelist OV-AU 0.68 0.16 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 4 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 4 18823205 44562615 2 2 146 1 0 1 0 0 0.57 0.41 5 0 0 5 3 5 10 6 6 30.28 20.04 79.94 0 1 2 Whitelist OV-AU 0.68 0.66 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 4 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 5 26013258 28587896 2 2 146 1 1 0 0 0 0.57 0.73 2 0 0 NA NA NA 9 6 6 30.28 49.84 50.01 0 1 2 Whitelist OV-AU 0.68 0.91 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 4 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 6 32900883 170332920 3 5 146 1 1 1 0 2 0.8 1 5 0 0 5 5 5 6 6 6 30.28 28.22 71.64 0 1 2 Whitelist OV-AU 0.93 1 0 0 0.84 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 8 0.03 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 7 17651563 151348579 4 7 146 0 1 1 2 3 0.57 0.27 9 0 0 9 9 9 11 11 11 30.28 0.11 99.66 0 2 1 Whitelist OV-AU 0.68 0.51 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 11 0.04 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 False positive; manually removed OV-AU::AOCS-063 8 56014320 146086262 2 3 146 0 1 0 1 1 0.57 0.02 16 0 0 16 7 10 19 8 10 30.28 99.78 0.02 0 3 4 Whitelist OV-AU 0.87 0.09 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 5 0.02 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 9 836262 95624673 1 5 146 3 0 0 0 2 0.03 0.03 5 0 0 5 3 5 8 3 5 30.28 37.55 61.75 0 2 0 Whitelist OV-AU 0.1 0.12 0 0 0.33 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 8 0.03 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 10 122185324 135257196 1 8 146 1 0 1 0 6 0.57 0.23 7 0 0 7 3 5 9 3 5 30.28 25.96 73.86 0 4 5 Whitelist OV-AU 6 0.62 0.46 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 10 0.03 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 11 16954972 29188933 1 3 146 1 0 0 1 1 0.57 0.01 6 0 0 6 3 6 10 5 5 30.28 16.74 82.83 0 2 1 Whitelist OV-AU 0.87 0.04 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 5 0.02 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 12 46882086 58972791 1 1 146 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 6 3 3 30.28 37.59 62.33 0 2 NA Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 13 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 14 97926552 97946716 1 1 146 1 0 0 0 0 0.39 0.81 2 0 NA NA NA NA 5 5 5 30.28 22.49 76.6 0 1 2 Whitelist OV-AU 0.62 0.96 0 NA 0.59 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 15 NA NA 0 0 146 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.95 0 NA NA 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 16 12051038 12068916 1 1 146 1 0 0 0 0 0.39 0.8 1 0.02 NA NA NA NA NA NA NA 30.28 26.27 73.29 0 2 NA Whitelist OV-AU 0.62 0.95 0.02 NA 0.59 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 17 29296842 60513139 1 7 146 5 0 0 0 2 0 0 9 0 0 9 3 5 11 3 4 30.28 88.17 11.82 0 4 0 Whitelist OV-AU 0.41 0 0 0 0.07 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 12 0.04 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 18 1672650 1684020 1 1 146 1 0 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 30.28 62.92 37.04 0 2 NA Whitelist OV-AU 0.62 0.95 NA NA 0.59 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 19 15473202 17455495 1 2 146 1 0 1 0 0 0.57 0.07 3 0 0 NA NA NA 5 5 5 30.28 44.56 55.26 0 2 1 Whitelist OV-AU 0.68 0.21 0 0 0.64 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 4 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 20 NA NA 0 0 146 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.93 NA NA NA 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 21 44455635 44479169 1 1 146 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 5 3 4 30.28 26.32 51.03 0 1 4 Whitelist OV-AU 0.62 0.51 NA NA 0.59 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 22 NA NA 0 0 146 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.89 NA NA NA 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-063 X 71393022 93832222 1 2 146 2 0 0 0 0 0.11 0.45 4 0 0 4 4 4 7 5 5 30.28 0.03 99.74 0 1 2 Whitelist OV-AU 0.54 0.7 0 0 0.48 0 No OV-AU AOCS-063 OV 0.58 1.96 Ovary-AdenoCA NA 4 0.01 NA 2 OV-AU DO46340 AOCS-063 female deceased C48.2 62 616 616 NA Included Ovary-AdenoCA OV AU 1 20.26 OV-AU::AOCS-064 1 87122102 100989165 2 2 402 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 31 6 6 71.09 93.72 6.28 0 3 4 Whitelist OV-AU 0.68 0.02 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 4 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 2 29023386 177956696 2 16 402 0 0 2 2 12 0.26 0.03 33 0 0 33 5 9 47 6 7 71.09 81.43 15.96 0 3 5 Whitelist OV-AU 11_8 0.87 0.11 0 0 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 20 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 3 60780567 60857475 2 2 402 0 1 0 1 0 0.57 0.24 1 0 0 NA NA NA 21 8 8 71.09 88.53 8.32 0 3 NA Whitelist OV-AU 0.68 0.48 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 4 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 4 19583669 172211276 6 10 402 3 0 0 3 4 0.11 0.06 22 0 0 22 5 8 33 5 5 71.09 90.68 9.08 0 4 3 Whitelist OV-AU 7 0.62 0.18 0 0 0.48 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 16 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 5 4173660 162269271 1 14 402 3 0 1 0 10 0.11 0.68 17 0 0 17 5 14 18 5 5 71.09 81.79 18.09 0 3 4 Whitelist OV-AU X 0.62 0.88 0 0 0.48 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 18 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 6 7658407 155026424 1 11 402 2 0 1 0 8 0.3 0.14 13 0 0 13 3 6 19 4 6 71.09 91.34 8.51 0 4 3 Whitelist OV-AU 16_5 0.54 0.34 0 0 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 14 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 7 75921658 99227825 2 5 402 1 0 0 1 3 0.57 0 8 0 0 8 5 8 38 7 13 71.09 94.78 2.25 6 4 5 Whitelist OV-AU 0.62 0 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 7 0.01 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 8 93054425 132131037 2 16 402 0 1 1 0 14 0.57 0 21 0 0 21 6 7 31 6 7 71.09 77.12 22.53 0 4 5 Whitelist OV-AU 11_12_2_7 0.68 0 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 18 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 9 100058908 123449314 1 2 402 0 2 0 0 0 0.11 0.9 4 0 0 4 3 4 16 7 7 71.09 8 91.81 0 2 1 Whitelist OV-AU 0.54 1 0 0 0.48 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 4 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 10 32829888 32853240 1 1 402 1 0 0 0 0 0.39 0.15 2 0 NA NA NA NA 5 3 3 71.09 99.81 0.02 0 2 3 Whitelist OV-AU 0.62 0.35 0 NA 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 11 14979530 120598889 1 13 402 1 3 1 0 8 0.28 0.29 14 0 0 14 6 11 18 7 7 71.09 62.11 37.32 1 2 3 Whitelist OV-AU 2_8 0.54 0.53 0 0 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 18 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 12 19626362 116571047 1 15 402 1 1 2 0 11 0.57 0.06 17 0 0 17 10 10 22 10 10 71.09 48.54 51.38 0 3 2 Whitelist OV-AU 8 0.93 0.18 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 19 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 13 34158901 105837317 1 7 402 1 1 1 1 3 1 0.78 7 0 0 7 5 7 8 5 5 71.09 23.43 76.57 0 2 1 Whitelist OV-AU 11 0.77 0.94 0 0 1 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 11 0.01 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 14 83613670 83637973 1 1 402 1 0 0 0 0 0.39 0.47 1 0 NA NA NA NA 12 5 5 71.09 86.61 13.26 0 3 NA Whitelist OV-AU 0.62 0.72 0 NA 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 15 NA NA 0 0 402 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.69 0 NA NA 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 16 2392697 87897430 1 11 402 1 3 0 0 7 0.11 0.21 18 0 0 18 6 11 18 6 10 71.09 72.09 27.8 0 3 2 Whitelist OV-AU 0.62 0.44 0 0 0.48 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 15 0.02 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 17 NA NA 0 0 402 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.25 0 NA NA 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 18 38298045 38375474 1 1 402 1 0 0 0 0 0.39 0.76 1 0 NA NA NA NA 4 0 0 71.09 29.01 70.96 0 4 NA Whitelist OV-AU 0.62 0.92 0 NA 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 19 12463342 14722676 1 1 402 0 1 0 0 0 0.39 0.59 2 0 NA NA NA NA 6 3 3 71.09 77.86 20.26 0 3 5 Whitelist OV-AU 0.62 0.81 0 NA 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 20 49725606 62269298 2 2 402 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA NA NA NA 71.09 99.02 0.01 0 2 3 Whitelist OV-AU 0.68 0.04 0 0 0.64 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 4 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 21 NA NA 0 0 402 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist OV-AU NA 0.61 0 NA NA 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 22 27472415 50780739 1 5 402 1 2 0 0 2 0.3 0.25 5 0 0 5 3 5 6 3 3 71.09 98.91 0.06 0 4 2 Whitelist OV-AU 0.93 0.49 0 0 0.59 1 No OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA NA 8 0.01 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-064 X 43392645 129894760 14 15 402 5 2 5 2 1 0.46 0.01 25 0 0 25 8 8 37 9 9 71.09 84.11 15.83 0 3 2 Whitelist OV-AU 0.73 0.05 0 0 0.64 1 High confidence OV-AU AOCS-064 OV 0.67 3.2 Ovary-AdenoCA With other complex events 29 0.04 frameshift_deletion,17_7577022_-_GCTTAGT,CN:2 3 OV-AU DO46342 AOCS-064 female deceased C56 67 1398 1398 NA Included Ovary-AdenoCA OV AU 1 45.99 OV-AU::AOCS-065 1 1627691 197950627 1 18 255 4 6 0 0 8 0.01 0.16 16 0 0 16 5 8 17 6 6 35.46 52.75 47.25 0 2 3 Whitelist OV-AU 5 0.68 0.37 0 0 0.23 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 28 0.05 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 2 42549921 220375355 1 10 255 2 8 0 0 0 0 0.26 16 0 0 16 12 16 17 13 13 35.46 3.09 96.81 0 2 3 Whitelist OV-AU 0.06 0.5 0 0 0.04 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 20 0.04 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 3 3341990 5042798 3 3 255 0 1 2 0 0 0.3 0.22 5 0 0 5 5 5 23 14 14 35.46 11.6 88.35 0 3 2 Whitelist OV-AU 0.62 0.45 0 0 0.59 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 6 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 4 19179177 183422239 1 11 255 1 6 1 0 3 0.01 1 17 0 0 17 7 17 20 7 7 35.46 47.99 51.8 0 2 3 Whitelist OV-AU 10 0.41 1 0 0 0.21 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 19 0.04 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 5 10938087 175552950 1 27 255 3 8 2 0 14 0.01 0 23 0 0 23 9 23 26 9 9 35.46 71.43 25.61 0 3 2 Whitelist OV-AU 1_15_6 0.62 0 0 0 0.24 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 40 0.08 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 6 44943212 164824872 1 10 255 1 4 0 1 4 0.11 0.89 7 0 0 7 5 7 7 5 7 35.46 63.1 33.68 0 1 2 Whitelist OV-AU 5_8 0.62 1 0 0 0.48 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 16 0.03 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 7 12507338 150255659 1 14 255 0 6 1 1 6 0.01 0.16 9 0 0 9 4 9 11 4 4 35.46 7.89 91.89 0 2 3 Whitelist OV-AU 8_X 0.62 0.37 0 0 0.21 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 22 0.04 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 8 22020075 122183195 3 12 255 0 1 1 1 9 0.8 0 20 0 0 20 9 10 28 9 10 35.46 55.64 43.95 0 5 4 Whitelist OV-AU 6_X 0.93 0 0 0 0.84 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 15 0.03 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 False positive; manually removed OV-AU::AOCS-065 9 104635636 104790782 2 2 255 1 0 1 0 0 0.57 0.75 3 0 0 NA NA NA 14 7 7 35.46 5.59 93.71 0 2 1 Whitelist OV-AU 0.68 0.91 0 0 0.64 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 10 59327874 89680944 1 4 255 1 3 0 0 0 0.11 0.1 6 0 0 6 5 6 7 5 5 35.46 0.14 99.68 0 2 3 Whitelist OV-AU 0.54 0.26 0 0 0.48 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 11 97626417 124292187 1 3 255 1 2 0 0 0 0.3 0.04 3 0 0 NA NA NA 6 6 6 35.46 13.52 85.93 0 2 1 Whitelist OV-AU 0.62 0.13 0 0 0.59 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 6 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 12 16743499 100411708 1 10 255 0 5 0 0 5 0 0.88 4 0 0 4 4 4 5 4 5 35.46 26.38 73.53 0 2 3 Whitelist OV-AU 1_5 0.54 1 0 0 0.07 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 15 0.03 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 13 22985999 111112504 1 6 255 1 3 0 0 2 0.11 0.73 7 0 0 7 7 7 7 7 7 35.46 99 1 0 1 2 Whitelist OV-AU 6 0.54 0.91 0 0 0.48 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 10 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 14 21390241 106391487 1 5 255 1 4 0 0 0 0.04 0.47 11 0 0 11 6 7 11 6 7 35.46 3.67 95.44 0 3 2 Whitelist OV-AU 0.45 0.71 0 0 0.36 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 10 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 15 23820398 94269461 1 8 255 0 5 0 0 3 0 0.13 5 0 0 5 5 5 5 5 5 35.46 0.05 99.85 0 2 3 Whitelist OV-AU 5 0.21 0.32 0 0 0.07 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 13 0.03 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 16 67902771 79178003 1 3 255 0 3 0 0 0 0.03 0.7 5 0 0 5 5 5 6 6 6 35.46 45.66 54.25 0 1 2 Whitelist OV-AU 0.41 0.89 0 0 0.33 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 6 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 17 28049076 39026598 1 3 255 0 3 0 0 0 0.03 0.34 2 0 0 NA NA NA NA NA NA 35.46 99.82 0.07 0 1 2 Whitelist OV-AU 0.41 0.59 0 0 0.33 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 6 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 18 30285871 30301858 1 1 255 0 1 0 0 0 0.39 0.7 1 0 NA NA NA NA NA NA NA 35.46 73.68 26.29 0 1 NA Whitelist OV-AU 0.62 0.89 0 NA 0.59 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 2 0 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 19 11246708 50125481 1 5 255 0 3 0 0 2 0.03 0.17 5 0 0 5 5 5 5 5 5 35.46 73.34 26.49 0 1 2 Whitelist OV-AU 0.45 0.39 0 0 0.33 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 20 720729 57763475 1 7 255 2 3 0 0 2 0.14 0.03 12 0 0 12 4 5 13 5 5 35.46 42.21 56.81 1 3 1 Whitelist OV-AU 0.62 0.1 0 0 0.59 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 12 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 21 NA NA 0 0 255 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.63 NA NA NA 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 0 0 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 22 31351321 35846798 2 2 255 0 0 1 1 0 0.57 0.77 4 NA 0 4 4 4 5 5 5 35.46 99.54 0.46 0 1 2 Whitelist OV-AU 0.68 0.93 NA 0 0.64 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-065 X 66347450 132168604 3 7 255 0 0 2 1 4 0.3 0.08 5 0 0 5 5 5 8 5 5 35.46 30.35 69.42 0 2 3 Whitelist OV-AU 8 0.96 0.24 0 0 0.59 0 No OV-AU AOCS-065 OV 0.7 1.88 Ovary-AdenoCA NA 10 0.02 stopgain,17_7579414_T_C,CN:1 2 OV-AU DO46344 AOCS-065 female deceased C48.2 46 642 642 NA Included Ovary-AdenoCA OV AU 1 21.12 OV-AU::AOCS-075 1 76045362 227389874 7 13 166 0 3 1 3 6 0.28 0 11 0 0 11 5 11 19 5 13 47.8 99.95 0.05 2 4 6 Whitelist OV-AU 0.62 0 0 0 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 20 0.06 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 2 38302527 95759297 1 5 166 0 5 0 0 0 0 0.05 9 0 0 9 5 9 9 5 5 47.8 37.2 60.11 0 4 3 Whitelist OV-AU 0.1 0.16 0 0 0.07 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 3 36494050 194334592 1 13 166 3 6 0 0 4 0.01 0.29 20 0 0 20 5 7 21 5 6 47.8 59.05 40.46 1 7 4 Whitelist OV-AU 0.62 0.53 0 0 0.21 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 22 0.07 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 4 19724726 19784160 1 1 166 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 0 4 47.8 0.29 99.61 0 1 3 Whitelist OV-AU 0.62 0.04 NA NA 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 5 10085152 171739010 1 8 166 2 5 0 0 1 0.02 1 11 0 0 11 4 5 14 4 5 47.8 30.7 66.52 2 2 6 Whitelist OV-AU 0.54 1 0 0 0.33 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 6 54618182 141731182 1 5 166 1 2 0 0 2 0.3 0.87 7 0 0 7 4 5 11 4 4 47.8 33.8 63.36 0 2 4 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 7 32948852 33133307 1 1 166 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 7 4 4 47.8 67.53 32.25 0 2 4 Whitelist OV-AU 0.62 0.46 0 NA 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 8 75868121 142525955 1 4 166 0 4 0 0 0 0.01 0.29 7 0 0 7 4 4 9 4 4 47.8 67.14 29.44 1 6 7 Whitelist OV-AU 0.21 0.53 0 0 0.16 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 9 90636219 130808327 1 2 166 0 2 0 0 0 0.11 0.23 2 0.01 0 NA NA NA 5 3 3 47.8 0.66 99.18 0 2 4 Whitelist OV-AU 0.54 0.46 0.01 0 0.48 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 10 10174318 130042356 1 8 166 1 5 0 0 2 0.01 0.85 13 0 0 13 3 4 14 3 4 47.8 92.58 3.98 6 4 3 Whitelist OV-AU 0.54 0.99 0 0 0.19 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 11 25606997 99211583 1 7 166 0 3 0 0 4 0.03 0.06 11 0 0 11 4 5 16 5 6 47.8 89.24 10.33 1 3 4 Whitelist OV-AU 0.62 0.19 0 0 0.33 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 12 52391425 99204290 1 8 166 1 5 0 0 2 0.01 0.58 10 0 0 10 4 8 12 5 9 47.8 99.75 0.17 0 4 5 Whitelist OV-AU 15 0.21 0.8 0 0 0.19 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 13 64992461 103897046 1 2 166 0 2 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 47.8 0.11 99.89 0 2 4 Whitelist OV-AU 0.54 0.33 NA 0 0.48 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 14 23002761 78764180 1 7 166 1 6 0 0 0 0 0.37 8 0 0 8 5 8 11 5 9 47.8 97.21 0 4 4 5 Whitelist OV-AU 0.13 0.62 0 0 0.09 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 15 32383091 64900363 1 4 166 2 2 0 0 0 0.26 0.03 4 0 0 4 4 4 8 5 6 47.8 75.83 19.26 0 2 4 Whitelist OV-AU 0.62 0.1 0 0 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 16 28507746 29042737 2 2 166 0 1 1 0 0 0.57 0.01 2 0 0 NA NA NA 12 4 6 47.8 8.44 86.21 0 1 3 Whitelist OV-AU 0.68 0.06 0 0 0.64 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 17 759078 2281948 2 2 166 0 2 0 0 0 0.11 1 5 0 0 5 3 3 8 4 5 47.8 4.2 95.79 0 3 2 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 18 4765069 67133757 1 2 166 0 2 0 0 0 0.11 0.34 3 NA 0.04 NA NA NA NA NA NA 47.8 0.12 99.85 0 2 4 Whitelist OV-AU 0.54 0.59 NA 0.04 0.48 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 19 6340453 38670170 4 7 166 1 1 1 1 3 1 0 8 0 0 8 3 5 14 3 3 47.8 58.23 34.4 0 5 2 Whitelist OV-AU 0.77 0 0 0 1 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 20 6503727 17502684 2 2 166 1 0 1 0 0 0.57 0 11 0 0 11 3 5 14 3 3 47.8 99.01 0 0 4 6 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 21 41876861 47623754 3 5 166 1 0 1 1 2 0.8 0 6 0 0 6 0 3 21 5 5 47.8 77.19 0 0 6 1 Whitelist OV-AU 0.93 0 0 0 0.84 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 22 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-075 X 21000475 22910654 1 1 166 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 47.8 1.23 98.54 0 2 3 Whitelist OV-AU 0.62 0.08 NA NA 0.59 0 No OV-AU AOCS-075 OV 0.47 3.07 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:4 5 OV-AU DO46346 AOCS-075 female deceased C56 54 1187 1187 NA Included Ovary-AdenoCA OV AU 1 39.05 OV-AU::AOCS-077 1 75235375 244311868 1 8 125 3 5 0 0 0 0.03 0.87 15 0 0 15 6 10 16 6 6 87.02 100 0 0 6 8 Whitelist OV-AU 0.41 1 0 0 0.33 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 16 0.06 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 2 68137098 178541036 1 6 125 0 4 0 0 2 0.01 0.19 11 0 0 11 9 11 12 9 9 87.02 97.39 0 0 4 6 Whitelist OV-AU 0.25 0.42 0 0 0.16 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 10 0.04 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 3 81273824 180696577 1 5 125 3 0 0 0 2 0.03 0.86 7 0 0 7 3 4 11 3 4 87.02 96.85 0 0 8 4 Whitelist OV-AU 0.45 0.99 0 0 0.33 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 8 0.03 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 4 12868430 153822838 1 2 125 1 0 1 0 0 0.57 0.05 6 0.02 0 6 3 6 8 5 5 87.02 97.62 0 0 3 5 Whitelist OV-AU 0.68 0.16 0.02 0 0.64 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 5 99105741 142732543 1 4 125 1 2 0 1 0 0.57 0.71 4 0 0 4 4 4 11 5 9 87.02 97.31 0 0 4 6 Whitelist OV-AU 0.68 0.9 0 0 0.64 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 8 0.03 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 6 68316421 152039746 1 3 125 1 1 0 0 1 0.57 0.13 3 NA 0 NA NA NA 5 3 5 87.02 96.89 0 0 4 6 Whitelist OV-AU 0.62 0.32 NA 0 0.64 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 5 0.02 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 7 8053334 151037120 1 9 125 1 1 0 0 7 0.57 0.11 9 0 0 9 5 7 9 5 7 87.02 99.78 0 0 6 7 Whitelist OV-AU 0.97 0.28 0 0 0.64 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 11 0.04 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 8 52782802 130512385 6 9 125 3 0 3 0 3 0.11 0 19 0 0 19 0 3 25 3 3 87.02 96.58 0 0 29 37 Whitelist OV-AU 0.85 0 0 0 0.48 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 15 0.06 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 9 109106672 109152050 1 1 125 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 7 87.02 43.76 53.13 0 2 4 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 10 114183120 114353019 1 1 125 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 6 3 3 87.02 96.44 0.13 0 2 4 Whitelist OV-AU 0.62 0.63 NA NA 0.59 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 11 71684839 81028607 1 6 125 4 1 1 0 0 0.11 0.09 12 0 0 12 4 5 15 4 5 87.02 71.58 24.33 0 2 5 Whitelist OV-AU 0.54 0.24 0 0 0.48 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 12 0.05 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 12 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 13 NA NA 0 0 125 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.7 NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 14 21698290 70503464 1 2 125 1 1 0 0 0 0.57 0.45 4 NA 0 4 3 4 6 3 3 87.02 96.29 0 0 6 3 Whitelist OV-AU 0.68 0.69 NA 0 0.64 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 15 71163699 71546921 1 1 125 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 3 87.02 95.09 0 0 4 6 Whitelist OV-AU 0.62 0.51 NA NA 0.59 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 16 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 17 NA NA 0 0 125 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 18 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 19 14774987 59083325 16 27 125 4 5 4 3 11 0.92 0 31 0 0 31 3 6 33 3 6 87.02 87.9 4.75 14 2 3 Whitelist OV-AU 0.68 0 0 0 0.94 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 43 0.17 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 20 19233551 19254643 1 1 125 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 5 7 87.02 98.93 0 0 5 6 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 21 33002989 34631367 1 4 125 0 1 0 0 3 0.39 0 3 0 0 NA NA NA 10 3 3 87.02 76.3 1.05 4 4 6 Whitelist OV-AU 0.68 0 0 0 0.59 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 5 0.02 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 22 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-077 X NA NA 0 0 125 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.09 NA NA NA 0 No OV-AU AOCS-077 OV 0.25 4.7 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:4 4 OV-AU DO46350 AOCS-077 female deceased C48.2 66 886 886 NA Included Ovary-AdenoCA OV AU 1 29.14 OV-AU::AOCS-078 1 37043882 234963260 4 30 457 2 2 2 2 22 1 0 66 0 0 66 5 9 82 5 9 87.84 97.03 0 2 4 8 Whitelist OV-AU 18_7 0.62 0 0 0 1 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 38 0.04 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 2 75230729 76556318 3 3 457 0 2 1 0 0 0.3 0.31 3 0 0 NA NA NA 51 5 6 87.84 97.3 0 0 4 6 Whitelist OV-AU 0.62 0.56 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 3 100707320 101706252 6 6 457 1 5 0 0 0 0.01 0.01 5 0 0 5 3 3 58 6 10 87.84 99.48 0 3 8 5 Whitelist OV-AU 0.25 0.06 0 0 0.19 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 4 57205293 72356174 2 3 457 0 1 1 0 1 0.57 0.11 12 0 0 12 4 8 38 6 6 87.84 80.68 16.86 0 2 3 Whitelist OV-AU 0.62 0.29 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 5 13938744 167773585 1 7 457 2 4 0 0 1 0.06 0 13 0 0 13 5 11 14 5 5 87.84 99.84 0 10 5 4 Whitelist OV-AU 0.54 0 0 0 0.48 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 6 27276538 43865748 4 4 457 1 0 2 1 0 0.57 0.17 4 0 0 4 4 4 34 12 14 87.84 99.85 0 6 4 5 Whitelist OV-AU 0.68 0.38 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 7 559305 156711736 1 20 457 3 5 1 2 9 0.36 0.84 35 0 0 35 5 12 36 5 9 87.84 99.32 0.46 4 5 6 Whitelist OV-AU 1 0.68 0.97 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 31 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 8 37094032 51931583 2 2 457 1 1 0 0 0 0.57 0.59 4 0 0 4 0 3 28 6 6 87.84 91.75 4.56 0 2 4 Whitelist OV-AU 0.68 0.81 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 9 114608563 115054604 2 2 457 0 0 1 1 0 0.57 0.47 2 0 0 NA NA NA 23 3 5 87.84 99.84 0 0 3 4 Whitelist OV-AU 0.68 0.71 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 10 10638409 126440995 1 17 457 0 15 0 0 2 0 0.43 26 0 0 26 18 26 27 18 18 87.84 96.49 0 0 5 4 Whitelist OV-AU 0 0.68 0 0 0 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 32 0.04 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 11 34338557 34822056 5 5 457 1 4 0 0 0 0.04 0 11 0 0 11 0 3 49 8 8 87.84 82.92 16.66 0 8 3 Whitelist OV-AU 0.45 0 0 0 0.36 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 12 32561517 132164132 1 8 457 0 1 1 0 6 0.57 0 11 0 0 11 5 6 14 5 5 87.84 99.88 0.04 0 3 2 Whitelist OV-AU 0.62 0.02 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 13 44292583 45262247 2 5 457 1 1 0 0 3 0.57 0.25 5 0 0 5 3 5 18 6 14 87.84 99.86 0 0 3 4 Whitelist OV-AU 1 0.93 0.49 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 14 55481685 56893691 6 6 457 0 4 1 1 0 0.11 0 8 0 0 8 3 3 33 5 11 87.84 82.08 0 0 3 1 Whitelist OV-AU 0.54 0.01 0 0 0.48 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 15 43449496 44871917 3 3 457 1 2 0 0 0 0.3 0.39 2 0 0 NA NA NA 11 9 9 87.84 95.09 0 0 4 5 Whitelist OV-AU 0.62 0.64 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 16 1297764 69727627 1 7 457 2 1 0 0 4 0.3 0.47 13 0 0 13 4 6 15 5 8 87.84 44.17 51.3 2 2 5 Whitelist OV-AU 0.62 0.71 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 17 35943519 71465923 3 24 457 0 2 3 1 18 0.34 0 20 0 0 20 4 7 23 4 7 87.84 46.77 48.77 0 3 2 Whitelist OV-AU 12 0.62 0 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 30 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 18 370844 75885477 1 15 457 3 5 1 2 4 0.36 0.06 24 0 0 24 4 11 25 5 7 87.84 99.94 0 1 4 5 Whitelist OV-AU 1 0.73 0.18 0 0 0.59 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 26 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 19 8041336 44146426 16 26 457 2 6 5 3 10 0.48 0 43 0 0 43 3 7 56 8 8 87.84 68.95 23.53 0 5 4 Whitelist OV-AU 1 0.62 0 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 42 0.05 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 20 33827830 36262202 2 2 457 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 21 6 6 87.84 92.41 0 0 4 5 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 21 42463523 43202674 2 2 457 0 2 0 0 0 0.11 0.83 4 0 0 4 3 4 11 5 5 87.84 77.73 0 0 5 4 Whitelist OV-AU 0.54 0.97 0 0 0.48 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 22 37856286 45976806 1 3 457 0 2 0 0 1 0.11 0.83 5 0 0 5 0 4 7 3 5 87.84 33.21 66.4 0 4 2 Whitelist OV-AU 0.62 0.97 0 0 0.48 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-078 X 3566699 4006400 5 5 457 1 1 1 2 0 0.9 0.16 4 0 0 4 0 3 22 16 16 87.84 99.58 0 0 4 6 Whitelist OV-AU 0.93 0.37 0 0 0.92 0 No OV-AU AOCS-078 OV 0.64 4.25 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:5 3 OV-AU DO46352 AOCS-078 female deceased C56 60 677 677 NA Included Ovary-AdenoCA OV AU 1 22.27 OV-AU::AOCS-079 1 93975098 229706598 11 13 310 3 6 1 1 2 0.11 0 36 0 0 36 5 8 49 5 9 57.43 91.92 8.08 0 4 6 Whitelist OV-AU 0.54 0.01 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 2 12712655 163523575 1 9 310 2 5 1 0 1 0.07 0 14 0 0 14 9 13 15 9 13 57.43 99.89 0.02 0 3 5 Whitelist OV-AU 0.62 0.02 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 3 172093930 172686722 7 11 310 1 5 0 1 4 0.04 0 9 0 0 9 3 5 43 5 6 57.43 76.86 23.11 0 10 11 Whitelist OV-AU 0.62 0 0 0 0.38 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 4 25424703 116148270 1 5 310 1 3 0 0 1 0.11 0 11 0 0 11 7 11 13 7 13 57.43 0.53 99.25 0 2 3 Whitelist OV-AU 0.45 0 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 5 17465002 133818528 1 5 310 0 3 1 0 1 0.11 0 8 0 0 8 3 8 8 3 8 57.43 25.49 71.64 0 2 3 Whitelist OV-AU 0.45 0 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 6 11466719 11715609 18 30 310 1 11 2 4 12 0 0 12 0 0 12 3 3 39 4 4 57.43 18.79 81.05 0 15 6 Whitelist OV-AU 0.45 0 0 0 0.12 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 48 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 7 41547124 96259891 2 5 310 0 0 1 1 3 0.57 0.8 9 0 0 9 4 5 18 6 13 57.43 99.78 0 0 5 3 Whitelist OV-AU 0.62 0.95 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 8 87867307 127128564 2 13 310 0 0 1 3 9 0.11 0 17 0 0 17 3 3 26 4 6 57.43 77.7 18.8 0 6 8 Whitelist OV-AU 0.62 0.01 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 9 72767946 73239692 5 10 310 0 2 2 1 5 0.53 0 5 0 0 5 0 4 32 5 9 57.43 99.83 0 0 2 3 Whitelist OV-AU 0.62 0 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 10 62432288 125010831 1 6 310 1 3 1 1 0 0.57 0.1 11 0 0 11 5 6 13 5 5 57.43 84.21 15.61 0 3 4 Whitelist OV-AU 0.68 0.27 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 11 73783735 74088922 3 3 310 0 1 1 1 0 0.8 0.5 2 0 0 NA NA NA 19 4 4 57.43 64.58 35 0 6 8 Whitelist OV-AU 0.87 0.74 0 0 0.84 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 12 1669162 80473199 1 3 310 0 3 0 0 0 0.03 0 5 0 0 5 3 4 6 3 4 57.43 57.67 42.24 0 4 2 Whitelist OV-AU 0.41 0.01 0 0 0.33 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 13 NA NA 0 0 310 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.02 NA NA NA 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 14 34020773 62389186 2 3 310 0 0 1 1 1 0.57 0.42 6 0 0 6 3 6 21 4 5 57.43 84.88 14.21 0 5 3 Whitelist OV-AU 0.87 0.66 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 15 24845810 61323972 1 17 310 1 1 0 1 14 0.8 0 14 0 0 14 3 4 17 3 3 57.43 99.85 0.03 0 3 6 Whitelist OV-AU 1 0.59 0.02 0 0 0.84 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 16 78274402 78437326 2 7 310 1 0 1 0 5 0.57 0.01 2 0 0 NA NA NA 14 5 7 57.43 59.91 35.57 0 2 4 Whitelist OV-AU 0.96 0.03 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 17 27341036 46866013 1 2 310 0 2 0 0 0 0.11 0.29 3 0 0 NA NA NA 5 5 5 57.43 0.34 99.64 0 2 4 Whitelist OV-AU 0.54 0.54 0 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 18 54601989 54859885 1 1 310 0 1 0 0 0 0.39 0.29 2 0 NA NA NA NA 6 3 5 57.43 0.8 99.16 0 2 4 Whitelist OV-AU 0.62 0.54 0 NA 0.59 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 19 8917554 40675146 5 15 310 0 1 2 2 10 0.53 0 14 0 0 14 3 5 22 3 5 57.43 99.04 0.79 0 3 5 Whitelist OV-AU 1 0.85 0 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 20 29998818 30355353 4 4 310 0 2 1 1 0 0.57 0.17 4 0 0 4 0 3 10 3 3 57.43 56.09 42.92 0 2 4 Whitelist OV-AU 0.68 0.39 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 21 30465953 39933045 1 2 310 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 7 4 7 57.43 24.12 45.13 0 2 3 Whitelist OV-AU 0.54 1 NA 0 0.48 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 22 31558029 46510147 1 3 310 0 3 0 0 0 0.03 1 6 0 0 6 4 6 7 5 7 57.43 100 0 0 4 6 Whitelist OV-AU 0.41 1 0 0 0.33 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-079 X 141304364 149247513 2 2 310 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 7 5 7 57.43 0.52 99.25 0 2 3 Whitelist OV-AU 0.68 0.04 0 0 0.64 0 No OV-AU AOCS-079 OV 0.5 3.13 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 OV-AU DO46354 AOCS-079 female deceased C56 73 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-080 1 171650466 226908057 3 3 207 1 0 1 1 0 0.8 0.9 6 0 0 6 5 6 24 8 8 62.23 48.18 48.83 0 4 3 Whitelist OV-AU 0.87 1 0 0 0.84 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 2 65178109 67917873 7 7 207 2 0 2 3 0 0.44 0.17 6 0 0 6 6 6 21 15 15 62.23 99.9 0 0 3 4 Whitelist OV-AU 0.68 0.38 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 3 116093884 116465896 6 6 207 3 1 1 1 0 0.57 0.79 3 0 0 NA NA NA 12 8 8 62.23 96.81 0.05 0 4 3 Whitelist OV-AU 0.68 0.94 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 4 181846357 182258175 2 2 207 2 0 0 0 0 0.11 0.07 2 0 0 NA NA NA 11 5 5 62.23 0.9 98.97 0 1 2 Whitelist OV-AU 0.54 0.2 0 0 0.48 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 5 93218935 93633626 2 2 207 0 0 1 1 0 0.57 0.11 1 0 0 NA NA NA 4 3 3 62.23 45.85 51.49 0 2 NA Whitelist OV-AU 0.68 0.29 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 6 6609054 86618955 1 4 207 1 1 1 1 0 1 0.06 3 0 0 NA NA NA 5 3 3 62.23 44.71 55.13 0 2 3 Whitelist OV-AU 1 0.18 0 0 1 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 7 46884586 50179257 2 2 207 0 0 1 1 0 0.57 1 6 0 0 6 6 6 20 14 14 62.23 82.52 14.74 0 2 3 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 8 4625970 142053049 1 3 207 2 0 0 1 0 0.3 0.04 7 0 0 7 7 7 9 8 8 62.23 99.82 0.17 0 4 3 Whitelist OV-AU 0.62 0.13 0 0 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 9 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 10 80010869 80774154 1 2 207 1 1 0 0 0 0.57 0.07 3 0 0 NA NA NA 6 4 4 62.23 96.65 0 0 3 4 Whitelist OV-AU 0.68 0.2 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 11 27693680 108290364 2 5 207 0 1 2 1 1 0.57 0 31 0 0 31 5 5 33 5 5 62.23 53.42 46.02 0 4 2 Whitelist OV-AU 0.68 0 0 0 0.64 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 12 1913002 118872135 1 10 207 5 0 1 1 3 0.04 0 10 0 0 10 4 5 15 4 4 62.23 61.18 38.74 0 2 3 Whitelist OV-AU 0.47 0.03 0 0 0.38 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 13 110937246 111034387 1 1 207 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 62.23 99.92 0.08 0 2 3 Whitelist OV-AU 0.62 0.05 NA NA 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 14 102160139 102238052 1 1 207 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA 4 3 4 62.23 96.24 0.05 0 3 NA Whitelist OV-AU 0.62 0.46 NA NA 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 15 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 16 62930857 78800205 1 2 207 2 0 0 0 0 0.11 0.67 4 0 0 4 4 4 7 5 5 62.23 46.47 48.4 0 1 2 Whitelist OV-AU 0.54 0.87 0 0 0.48 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 17 79672876 79690085 1 1 207 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 62.23 22.6 77.4 0 3 NA Whitelist OV-AU 0.62 0.16 NA NA 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 18 34555514 34605332 1 1 207 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 62.23 75.67 19.69 0 4 NA Whitelist OV-AU 0.62 0.16 NA NA 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 19 15866356 45529483 10 21 207 3 0 3 4 11 0.31 0 30 0 0 30 4 8 52 7 8 62.23 64.88 27.84 5 5 6 Whitelist OV-AU 20 0.62 0 0 0 0.59 1 Low confidence OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA With other complex events 31 0.07 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 20 15018409 22766307 21 22 207 4 6 6 5 1 0.91 0 13 0 0 13 10 13 25 11 11 62.23 92.91 0 14 5 3 Whitelist OV-AU 0.89 0 0 0 0.94 1 High confidence OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA After polyploidization 43 0.1 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 21 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 22 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-080 X 32801310 33539365 3 3 207 2 1 0 0 0 0.3 0.04 1 0 0 NA NA NA NA NA NA 62.23 99.13 0.64 0 1 NA Whitelist OV-AU 0.62 0.13 0 0 0.59 1 No OV-AU AOCS-080 OV 0.92 3.05 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 3 OV-AU DO46356 AOCS-080 female deceased C56 68 911 911 NA Included Ovary-AdenoCA OV AU 1 29.97 OV-AU::AOCS-081 1 48075544 246829331 1 4 150 2 1 0 1 0 0.57 0.17 7 0 0 7 5 5 10 5 5 50.6 85.37 14.63 0 3 2 Whitelist OV-AU 0.68 0.39 0 0 0.64 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 2 25174217 74101696 2 6 150 0 0 2 2 2 0.26 0 16 0 0 16 10 16 45 12 12 50.6 42.73 57.14 0 4 3 Whitelist OV-AU 0.62 0.01 0 0 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 3 36585300 37746992 5 5 150 1 3 0 1 0 0.28 0.05 6 0 0 6 4 6 25 5 7 50.6 39.47 60.41 0 4 3 Whitelist OV-AU 0.62 0.17 0 0 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 4 176924458 176976961 1 2 150 1 0 1 0 0 0.57 0.01 3 NA 0 NA NA NA 4 3 3 50.6 9.19 90.79 0 2 1 Whitelist OV-AU 0.68 0.06 NA 0 0.64 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 5 1326917 126150912 16 16 150 5 3 4 4 0 0.92 0 27 0 0 27 20 21 31 22 22 50.6 60.18 37.15 0 1 2 Whitelist OV-AU 0.95 0.02 0 0 0.94 1 High confidence OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA Canonical without polyploidization 32 0.11 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 6 82107306 84854091 4 4 150 1 1 2 0 0 0.57 0 3 0 0 NA NA NA 32 7 7 50.6 33.1 66.77 0 2 4 Whitelist OV-AU 0.68 0 0 0 0.64 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 7 101803176 102502647 1 1 150 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 8 4 4 50.6 97.23 0.22 0 3 4 Whitelist OV-AU 0.62 0.03 NA NA 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 8 93877768 112941674 1 3 150 2 1 0 0 0 0.3 0.71 4 0 0 4 4 4 7 6 6 50.6 67.14 29.45 0 3 4 Whitelist OV-AU 0.62 0.9 0 0 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 9 NA NA 0 0 150 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 10 73312970 105051103 1 4 150 4 0 0 0 0 0.01 0.33 4 0 0 4 4 4 5 5 5 50.6 99.47 0.36 0 2 3 Whitelist OV-AU 0.21 0.58 0 0 0.16 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 11 124642853 131496084 3 3 150 2 1 0 0 0 0.3 0.12 2 0 0 NA NA NA 8 5 6 50.6 2.89 96.55 0 1 2 Whitelist OV-AU 0.62 0.3 0 0 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 12 126353969 132182141 2 3 150 1 0 1 0 1 0.57 0.7 5 0 0 5 3 5 10 6 8 50.6 99.92 0 0 3 4 Whitelist OV-AU 0.87 0.89 0 0 0.64 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 13 40465868 41222505 1 1 150 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 50.6 0.66 99.34 0 1 2 Whitelist OV-AU 0.62 0.2 NA NA 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 14 37608504 77874409 1 6 150 1 1 1 1 2 1 0.48 6 0 0 6 5 6 7 5 5 50.6 99.12 0.01 0 3 4 Whitelist OV-AU 0.93 0.72 0 0 1 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 15 43329292 43687616 1 1 150 0 1 0 0 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 50.6 0 100 0 2 NA Whitelist OV-AU 0.62 0.95 NA NA 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 16 NA NA 0 0 150 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 0.42 NA NA NA 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 17 28565830 74711441 1 6 150 0 3 0 0 3 0.03 0.13 3 0 0 NA NA NA 4 4 4 50.6 51.54 48.44 0 3 2 Whitelist OV-AU 0.54 0.32 0 0 0.33 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 18 52703432 52741560 1 1 150 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 50.6 99.92 0.05 0 2 3 Whitelist OV-AU 0.62 0.42 NA NA 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 19 28284394 41657699 3 3 150 0 1 1 1 0 0.8 0.01 10 0 0 10 0 5 16 5 5 50.6 54.74 37.98 0 6 2 Whitelist OV-AU 0.87 0.05 0 0 0.84 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 20 31675496 31994949 1 1 150 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 6 6 6 50.6 99.02 0 0 3 4 Whitelist OV-AU 0.62 0.93 NA NA 0.59 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 21 38467044 38486334 2 2 150 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 50.6 53.82 23.53 0 3 NA Whitelist OV-AU 0.68 0.05 0 0 0.64 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 22 36318667 41917696 3 3 150 0 1 1 1 0 0.8 0.03 3 0 0 NA NA NA 8 6 6 50.6 14.24 85.76 0 2 3 Whitelist OV-AU 0.87 0.12 0 0 0.84 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-081 X 55090249 122088967 1 4 150 0 1 1 1 1 0.8 0.71 5 0 0 5 4 5 9 4 4 50.6 54.46 45.32 0 2 3 Whitelist OV-AU 0.68 0.9 0 0 0.84 1 No OV-AU AOCS-081 OV 0.68 2.59 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_A_C,CN:2 3 OV-AU DO46358 AOCS-081 female deceased C56 60 423 423 NA Included Ovary-AdenoCA OV AU 1 13.91 OV-AU::AOCS-083 1 12109355 229482897 1 12 242 3 8 0 0 1 0 0.4 20 0 0 20 5 9 20 5 9 83.96 100 0 0 5 3 Whitelist OV-AU 0.04 0.65 0 0 0.07 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 23 0.05 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 2 141054898 218917761 1 2 242 1 1 0 0 0 0.57 0 6 0 0 6 3 4 9 3 6 83.96 86.71 10.59 0 5 2 Whitelist OV-AU 0.68 0.01 0 0 0.64 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 3 115705285 116799586 3 3 242 3 0 0 0 0 0.03 0.45 8 0 0 8 4 5 24 7 7 83.96 99.49 0.35 0 2 1 Whitelist OV-AU 0.41 0.69 0 0 0.33 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 4 2489171 139518937 1 4 242 3 1 0 0 0 0.11 0.01 6 0 0 6 5 6 7 5 7 83.96 99.82 0.08 1 3 1 Whitelist OV-AU 0.54 0.06 0 0 0.48 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 8 0.02 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 5 36476218 162224761 1 12 242 2 4 1 0 5 0.17 0.69 12 0 0 12 3 6 14 3 8 83.96 99.87 0 0 5 6 Whitelist OV-AU 20 0.68 0.89 0 0 0.59 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 19 0.04 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 6 7007644 162655913 1 10 242 2 4 0 0 4 0.06 0.59 13 0 0 13 3 4 18 4 5 83.96 99.62 0.23 0 4 3 Whitelist OV-AU 0.3 0.81 0 0 0.48 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 16 0.03 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 7 17412801 146713499 1 11 242 5 2 0 0 4 0.02 0.89 15 0 0 15 5 9 16 5 9 83.96 97.4 0.05 0 5 3 Whitelist OV-AU 0.54 1 0 0 0.33 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 18 0.04 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 8 55120563 68804877 1 3 242 0 1 1 1 0 0.8 0.03 3 0 0 NA NA NA 7 0 3 83.96 96.48 0 0 8 9 Whitelist OV-AU 0.87 0.1 0 0 0.84 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 9 103148168 114724704 1 2 242 0 0 0 2 0 0.11 0.32 1 0 0 NA NA NA 6 5 6 83.96 99.19 0.1 0 4 NA Whitelist OV-AU 0.54 0.57 0 0 0.48 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 10 43048341 45781939 2 2 242 1 1 0 0 0 0.57 1 6 0 0 6 3 5 20 5 5 83.96 95.99 0.17 0 12 5 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 11 681299 115592442 1 7 242 0 7 0 0 0 0 0.65 13 0 0 13 7 7 14 7 9 83.96 99.87 0 0 4 6 Whitelist OV-AU 0.02 0.86 0 0 0.01 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 14 0.03 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 12 93554867 93690177 2 2 242 0 2 0 0 0 0.11 0.03 4 0 0 4 0 3 30 5 11 83.96 96.11 0.15 0 4 5 Whitelist OV-AU 0.54 0.11 0 0 0.48 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 13 NA NA 0 0 242 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.36 NA NA NA 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 14 32862404 65745884 1 3 242 1 2 0 0 0 0.3 1 5 0 0 5 0 3 6 0 3 83.96 99.09 0 0 3 4 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 15 71879048 72082275 2 2 242 2 0 0 0 0 0.11 0.69 4 0 0 4 3 4 9 3 3 83.96 94.96 0.18 0 2 1 Whitelist OV-AU 0.54 0.89 0 0 0.48 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 16 4385507 32390909 4 6 242 1 1 1 1 2 1 0 12 0 0 12 5 5 23 5 6 83.96 22.68 77.22 0 3 2 Whitelist OV-AU 0.68 0 0 0 1 0 Linked to low confidence OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA With other complex events 10 0.02 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 17 19380296 56092707 1 10 242 0 1 0 1 8 0.57 0.16 8 0 0 8 3 4 9 4 5 83.96 60.32 39.66 0 3 2 Whitelist OV-AU 7 0.62 0.37 0 0 0.64 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 12 0.02 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 18 28732701 42091390 3 3 242 1 0 1 1 0 0.8 0.16 6 0 0 6 3 6 17 7 17 83.96 19.48 80.49 0 2 4 Whitelist OV-AU 0.87 0.37 0 0 0.84 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 19 3716326 58806899 37 42 242 13 11 5 8 5 0.26 0 75 0 0 75 4 6 77 4 7 83.96 84.44 7.73 16 6 8 Whitelist OV-AU 16 0.62 0 0 0 0.59 0 Low confidence OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA With other complex events 79 0.16 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 20 45559970 45750952 3 3 242 3 0 0 0 0 0.03 0 6 0 0 6 5 6 35 10 14 83.96 99.72 0 0 5 4 Whitelist OV-AU 0.41 0 0 0 0.33 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 21 NA NA 0 0 242 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.63 NA NA NA 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 22 38283449 46334924 1 2 242 1 1 0 0 0 0.57 0.38 4 0 0 4 3 4 5 3 3 83.96 99.62 0.38 0 4 2 Whitelist OV-AU 0.68 0.63 0 0 0.64 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-083 X 62925212 128000617 1 3 242 3 0 0 0 0 0.03 0 6 0 0 6 5 6 6 5 5 83.96 0.13 96.48 0 2 0 Whitelist OV-AU 0.41 0.02 0 0 0.33 0 No OV-AU AOCS-083 OV 0.56 4.18 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7577152_-_ACCACTACTC,CN:2 4 OV-AU DO46360 AOCS-083 female deceased C56 58 1759 1759 NA Included Ovary-AdenoCA OV AU 1 57.86 OV-AU::AOCS-084 1 37638433 46640509 8 8 146 1 1 3 3 0 0.57 0 11 0 0 11 8 9 44 12 12 69.47 90.72 6.31 0 6 7 Whitelist OV-AU 0.68 0 0 0 0.64 1 High confidence OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA After polyploidization 16 0.05 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 2 39660868 41960421 12 12 146 2 2 4 4 0 0.72 0.01 8 0 0 8 6 8 17 7 7 69.47 99.87 0.03 0 4 3 Whitelist OV-AU 0.83 0.03 0 0 0.8 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 24 0.08 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 3 44444787 115710441 1 2 146 0 0 1 1 0 0.57 0 6 NA 0 6 3 4 7 3 4 69.47 96.94 0 0 4 5 Whitelist OV-AU 0.68 0.02 NA 0 0.64 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 4 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 5 34886975 43559145 5 8 146 1 1 2 1 3 0.9 0 16 0 0 16 3 5 27 4 4 69.47 32.94 64.4 0 8 19 Whitelist OV-AU 0.68 0.02 0 0 0.92 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 13 0.04 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 6 31451555 31533395 1 1 146 0 1 0 0 0 0.39 0.73 2 0 NA NA NA NA 5 3 3 69.47 37.86 62 0 4 5 Whitelist OV-AU 0.62 0.9 0 NA 0.59 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 7 39370791 139110751 1 5 146 2 1 0 0 2 0.3 0.85 8 0 0 8 3 8 9 3 3 69.47 99.78 0 0 4 3 Whitelist OV-AU 1 0.93 0.99 0 0 0.59 1 Linked to high confidence OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA With other complex events 8 0.03 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 8 124079382 137843454 11 13 146 2 5 1 3 2 0.36 0 32 0 0 32 5 7 46 7 7 69.47 89.05 10.75 1 3 6 Whitelist OV-AU 1 0.8 0 0 0 0.59 1 Low confidence OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA With other complex events 24 0.08 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 9 130418188 130907010 1 1 146 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA 9 3 4 69.47 99.3 0 0 3 4 Whitelist OV-AU 0.62 0.63 NA NA 0.59 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 10 64953105 79724864 1 2 146 0 1 1 0 0 0.57 0.84 5 0 0 5 3 5 7 4 7 69.47 99.83 0 0 3 4 Whitelist OV-AU 0.68 0.98 0 0 0.64 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 11 43471872 64625370 1 4 146 0 2 0 0 2 0.11 1 4 0 0 4 4 4 7 5 5 69.47 99.47 0.1 0 3 4 Whitelist OV-AU 2 0.54 1 0 0 0.48 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 12 99976233 110836068 1 2 146 2 0 0 0 0 0.11 0.17 4 0 0 4 4 4 6 5 5 69.47 96.21 0.05 0 2 4 Whitelist OV-AU 0.54 0.38 0 0 0.48 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 13 21143937 64982102 1 3 146 0 2 0 0 1 0.11 1 5 0 0 5 4 5 9 5 5 69.47 99.89 0 0 3 4 Whitelist OV-AU 0.41 1 0 0 0.48 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 14 29805457 64100300 1 2 146 0 2 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 69.47 99.09 0 0 3 4 Whitelist OV-AU 0.54 0.59 NA 0 0.48 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 15 52828778 52852384 1 1 146 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 69.47 0.02 99.98 0 2 3 Whitelist OV-AU 0.62 0.69 NA NA 0.59 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 16 NA NA 0 0 146 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.41 NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 17 NA NA 0 0 146 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.42 NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 18 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 19 30376088 47329013 3 3 146 0 1 1 1 0 0.8 0 8 0 0 8 3 7 15 3 4 69.47 27.07 65.32 0 8 2 Whitelist OV-AU 0.87 0.02 0 0 0.84 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 20 31118802 33359802 1 3 146 1 0 1 0 1 0.57 0 5 0 0 5 0 3 11 6 6 69.47 98.96 0 1 3 5 Whitelist OV-AU 0.87 0.02 0 0 0.64 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 21 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 22 NA NA 0 0 146 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-084 X 38123771 38483468 1 1 146 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 69.47 99.54 0.23 0 1 2 Whitelist OV-AU 0.62 0.04 NA NA 0.59 1 No OV-AU AOCS-084 OV 0.64 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578442_C_T,CN:2 4 OV-AU DO46362 AOCS-084 female deceased C56 61 1639 1639 NA Included Ovary-AdenoCA OV AU 1 53.91 OV-AU::AOCS-085 1 10695512 221342855 1 10 95 1 5 0 1 3 0.04 0.09 14 0 0 14 12 14 16 13 13 22.76 6.96 92.98 0 2 3 Whitelist OV-AU 0.62 0.24 0 0 0.38 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 17 0.09 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 2 234343192 235935614 4 7 95 0 1 2 1 3 0.57 0.04 3 0 0 NA NA NA 7 7 7 22.76 0.9 99 0 2 3 Whitelist OV-AU 0.77 0.13 0 0 0.64 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 11 0.06 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 3 127296652 184097434 1 2 95 0 2 0 0 0 0.11 0.42 5 0 0 5 3 5 8 4 4 22.76 60.26 39.6 0 3 2 Whitelist OV-AU 0.54 0.67 0 0 0.48 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 4 NA NA 0 0 95 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist OV-AU NA 0.26 NA NA NA 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 5 148582679 162360676 1 2 95 0 2 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 22.76 0.41 99.47 0 2 3 Whitelist OV-AU 0.54 0.32 NA 0 0.48 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 6 63724002 84893098 10 10 95 1 3 4 2 0 0.57 0 9 0 0 9 9 9 12 10 10 22.76 62.36 37.51 0 1 2 Whitelist OV-AU 0.68 0 0 0 0.64 1 High confidence OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA Canonical without polyploidization 20 0.11 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 7 NA NA 0 0 95 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 8 17767778 135374690 1 5 95 0 4 0 0 1 0.01 0.34 6 0 0 6 4 6 6 4 4 22.76 15.06 84.82 0 3 2 Whitelist OV-AU 0.45 0.59 0 0 0.16 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 9 0.05 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 9 NA NA 0 0 95 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.81 NA NA NA 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 10 82913201 104809980 1 4 95 0 4 0 0 0 0.01 1 6 0 0 6 6 6 7 7 7 22.76 0.92 99.01 0 2 3 Whitelist OV-AU 0.21 1 0 0 0.16 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 8 0.04 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 11 19341833 27123937 1 2 95 0 2 0 0 0 0.11 0.33 4 NA 0 4 4 4 5 5 5 22.76 1.32 98.12 0 2 3 Whitelist OV-AU 0.54 0.58 NA 0 0.48 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 12 50742243 64508394 1 3 95 0 3 0 0 0 0.03 0.63 6 0 0 6 6 6 7 7 7 22.76 1.74 98.24 0 2 3 Whitelist OV-AU 0.41 0.84 0 0 0.33 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 6 0.03 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 13 103662907 103814511 1 2 95 0 0 1 1 0 0.57 0.78 3 NA 0 NA NA NA NA NA NA 22.76 0.11 99.89 0 2 3 Whitelist OV-AU 0.68 0.93 NA 0 0.64 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 14 30705103 105811040 1 6 95 1 1 0 0 4 0.57 0.13 8 0 0 8 8 8 10 9 10 22.76 67.86 28.43 0 1 2 Whitelist OV-AU 15 0.93 0.32 0 0 0.64 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 8 0.04 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 15 90608187 93394445 1 2 95 0 2 0 0 0 0.11 0.34 4 0 0 4 4 4 7 7 7 22.76 2.46 97.44 0 2 3 Whitelist OV-AU 0.54 0.59 0 0 0.48 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 16 1075280 11131770 1 4 95 0 2 1 0 1 0.3 0.33 5 0.43 0 5 4 5 7 4 4 22.76 50.85 48.84 0 2 3 Whitelist OV-AU 0.68 0.58 0.44 0 0.59 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 7 0.04 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 17 20939967 31670399 2 2 95 1 0 0 1 0 0.57 0.33 5 0 0 5 3 3 13 7 7 22.76 47.72 46.86 0 1 2 Whitelist OV-AU 0.68 0.58 0 0 0.64 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 18 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 19 41109626 41212739 2 2 95 0 1 1 0 0 0.57 0 4 0 0 4 0 3 10 3 5 22.76 22.35 77.08 0 1 3 Whitelist OV-AU 0.68 0 0 0 0.64 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 4 0.02 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 20 40194541 56282570 2 7 95 0 0 1 1 5 0.57 0 3 0 0 NA NA NA 5 5 5 22.76 98.94 0 0 3 4 Whitelist OV-AU 6 0.77 0 0 0 0.64 1 Linked to high confidence OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA With other complex events 9 0.05 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 21 44295817 44895957 1 1 95 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.76 1.25 76.11 0 2 3 Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 2 0.01 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 22 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-085 X 81167200 109721124 1 3 95 0 3 0 0 0 0.03 0.81 4 0 0 4 4 4 7 7 7 22.76 0.61 99.16 0 2 3 Whitelist OV-AU 0.41 0.96 0 0 0.33 1 No OV-AU AOCS-085 OV 0.62 1.89 Ovary-AdenoCA NA 6 0.03 NA 2 OV-AU DO46364 AOCS-085 female deceased C56 45 806 806 NA Included Ovary-AdenoCA OV AU 1 26.51 OV-AU::AOCS-086 1 33141056 233102642 1 12 162 3 5 1 0 3 0.09 0.14 23 0 0 23 8 9 24 8 8 38.36 43.47 56.53 0 2 1 Whitelist OV-AU 0.54 0.34 0 0 0.48 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 21 0.06 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 2 70965113 232136707 2 4 162 0 0 1 1 2 0.57 0.32 7 0 0 7 5 7 10 5 5 38.36 4.89 95.02 0 2 3 Whitelist OV-AU 6 0.68 0.57 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 3 31412256 183922500 1 10 162 3 1 1 0 5 0.28 0.54 10 0 0 10 4 8 10 4 4 38.36 21.66 78.2 0 2 3 Whitelist OV-AU 0.62 0.77 0 0 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 4 7671710 90342520 1 4 162 1 2 0 0 1 0.3 0.88 2 0 0 NA NA NA NA NA NA 38.36 56.2 43.58 0 1 2 Whitelist OV-AU 0.68 1 0 0 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 5 4283497 4649760 2 2 162 0 0 1 1 0 0.57 0.63 1 0 0 NA NA NA 6 3 3 38.36 38.27 61.61 0 3 NA Whitelist OV-AU 0.68 0.84 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 6 62259340 158844946 1 7 162 3 0 0 1 3 0.11 0.87 5 0 0 5 5 5 6 5 5 38.36 35.34 64.51 2 2 1 Whitelist OV-AU 0.77 1 0 0 0.48 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 7 99043692 106152142 2 2 162 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA 8 3 3 38.36 24.8 74.98 0 2 NA Whitelist OV-AU 0.68 0.13 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 8 23471734 87443769 2 3 162 0 0 1 1 1 0.57 0.1 4 0 0 4 3 4 13 4 5 38.36 70.28 25.74 0 2 1 Whitelist OV-AU 0.62 0.27 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 9 131682897 131707895 1 1 162 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 6 6 6 38.36 62.46 37.39 0 1 2 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 10 121217841 121242777 1 1 162 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 4 4 4 38.36 0.11 99.78 0 2 NA Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 11 39572186 77067275 1 7 162 1 2 1 0 3 0.57 0.13 11 0 0 11 4 11 17 4 4 38.36 77.41 18.76 0 2 3 Whitelist OV-AU 0.62 0.32 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 12 19111002 89166919 1 5 162 3 1 0 0 1 0.11 0.35 6 0 0 6 3 6 8 3 3 38.36 46.74 53.17 0 2 1 Whitelist OV-AU 0.62 0.6 0 0 0.48 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 13 111668969 111799521 1 2 162 0 0 1 1 0 0.57 0.83 1 0 0 NA NA NA NA NA NA 38.36 100 0 0 1 NA Whitelist OV-AU 0.68 0.97 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 14 25642187 68994185 1 5 162 1 2 0 0 2 0.3 0.36 8 0 0 8 4 7 12 4 5 38.36 23.7 75.38 0 3 4 Whitelist OV-AU 0.68 0.62 0 0 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 15 90193639 90300383 1 4 162 2 0 0 0 2 0.11 0.01 1 0 0 NA NA NA 5 3 3 38.36 0.11 99.89 0 1 NA Whitelist OV-AU 0.54 0.03 0 0 0.48 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 16 79077698 79153640 1 1 162 0 1 0 0 0 0.39 1 1 0.04 NA NA NA NA 4 0 3 38.36 56.62 43.28 0 1 NA Whitelist OV-AU 0.62 1 0.04 NA 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 17 NA NA 0 0 162 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.59 NA NA NA 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 18 20152952 56840989 1 5 162 1 2 0 0 2 0.3 0.08 4 0 0 4 3 4 5 3 3 38.36 0.07 99.89 0 2 1 Whitelist OV-AU 0.93 0.24 0 0 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 19 9196081 9321269 1 1 162 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 7 7 38.36 42.7 50.03 0 1 2 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 20 45535833 45693193 1 1 162 1 0 0 0 0 0.39 0.41 2 0 NA NA NA NA 6 5 5 38.36 10.08 88.94 0 1 2 Whitelist OV-AU 0.62 0.65 0 NA 0.59 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 21 27565415 33906745 1 2 162 0 2 0 0 0 0.11 0.45 1 0 0 NA NA NA NA NA NA 38.36 0 70.29 0 2 NA Whitelist OV-AU 0.54 0.7 0 0 0.48 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 22 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-086 X 2853637 134333082 1 6 162 2 0 1 1 2 0.57 1 6 0 0 6 3 4 8 3 4 38.36 31.77 68 0 2 1 Whitelist OV-AU 0.62 1 0 0 0.64 0 No OV-AU AOCS-086 OV 0.52 1.87 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577082_T_C,CN:1 2 OV-AU DO46366 AOCS-086 female deceased C57 65 2054 2054 NA Included Ovary-AdenoCA OV AU 1 67.57 OV-AU::AOCS-088 1 2223867 244890497 1 19 220 3 3 0 0 13 0.11 0.01 19 0 0 19 8 16 20 8 8 36.03 19.03 80.97 0 2 3 Whitelist OV-AU 3_4_6_7 0.87 0.03 0 0 0.48 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 25 0.06 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 2 77723295 220597731 1 4 220 2 1 0 0 1 0.3 0.33 4 0 0 4 4 4 4 4 4 36.03 19.95 79.95 0 1 2 Whitelist OV-AU 0.62 0.58 0 0 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 7 0.02 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 3 4366092 169031956 1 16 220 5 2 0 0 9 0.02 0.23 19 0 0 19 5 19 20 5 5 36.03 58.15 41.71 0 2 1 Whitelist OV-AU 1_6 0.79 0.47 0 0 0.33 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 23 0.05 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 4 40305377 173180686 1 7 220 3 4 0 0 0 0.06 0.28 7 0 0 7 5 7 11 5 5 36.03 6.05 93.94 0 2 1 Whitelist OV-AU 0.54 0.52 0 0 0.48 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 14 0.03 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 5 32337314 154669552 1 14 220 4 5 0 0 5 0.03 0.05 14 0 0 14 5 14 16 5 5 36.03 16.87 82.98 0 2 3 Whitelist OV-AU 7 0.54 0.17 0 0 0.33 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 23 0.05 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 6 1676841 126060595 1 19 220 2 3 2 0 12 0.44 0 18 0 0 18 13 16 21 13 13 36.03 47.24 52.62 0 3 2 Whitelist OV-AU 12_3 0.87 0 0 0 0.64 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 26 0.06 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 7 12800140 157183292 1 12 220 5 2 0 0 5 0.02 0.07 13 0 0 13 5 12 13 5 6 36.03 51.29 48.48 0 2 3 Whitelist OV-AU 1_5 0.68 0.21 0 0 0.33 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 19 0.04 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 8 11635126 144917248 1 9 220 3 3 0 0 3 0.11 0.54 12 0 0 12 4 12 12 4 4 36.03 14.37 85.62 0 2 3 Whitelist OV-AU 0.62 0.77 0 0 0.48 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 15 0.03 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 9 NA NA 0 0 220 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.54 0 NA NA 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 10 71581557 96761521 1 2 220 0 2 0 0 0 0.11 0.87 6 0 0 6 3 5 9 3 5 36.03 33.85 65.98 0 3 2 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 11 29803578 133257643 1 6 220 1 1 0 0 4 0.57 0.08 9 0 0 9 4 7 11 5 5 36.03 57.36 42.08 0 3 2 Whitelist OV-AU 0.93 0.22 0 0 0.64 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 8 0.02 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 12 67107550 129506250 1 7 220 2 3 0 0 2 0.14 0.34 10 0 0 10 5 5 13 5 5 36.03 35.71 64.21 0 1 2 Whitelist OV-AU 0.54 0.59 0 0 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 12 0.03 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 13 90990936 91024859 1 1 220 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 6 3 5 36.03 31.09 68.91 0 2 3 Whitelist OV-AU 0.62 0.14 NA NA 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 14 NA NA 0 0 220 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.11 0 NA NA 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 15 60281570 93207575 1 4 220 0 1 0 0 3 0.39 1 2 0 0 NA NA NA 4 4 4 36.03 35.62 64.28 0 1 2 Whitelist OV-AU 0.68 1 0 0 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 5 0.01 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 16 3955769 3979719 1 1 220 0 1 0 0 0 0.39 0.83 2 0 NA NA NA NA 4 3 3 36.03 41.02 58.85 0 2 3 Whitelist OV-AU 0.62 0.97 0 NA 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 17 NA NA 0 0 220 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 6 4 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.77 NA NA NA 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 18 21347463 21365930 1 1 220 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 8 7 7 36.03 63.34 36.63 0 2 3 Whitelist OV-AU 0.62 0.02 0 NA 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 19 14146559 14158936 1 1 220 0 1 0 0 0 0.39 0.34 1 0.11 NA NA NA NA NA NA NA 36.03 32.67 67.15 0 2 NA Whitelist OV-AU 0.62 0.59 0.11 NA 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 20 3610283 45706277 1 4 220 0 0 1 1 2 0.57 0.81 5 0 0 5 5 5 5 5 5 36.03 15.84 83.17 0 2 1 Whitelist OV-AU 1 0.96 0 0 0.64 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 6 0.01 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 21 NA NA 0 0 220 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.6 NA NA NA 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 22 36889962 41552573 1 3 220 2 1 0 0 0 0.3 0 3 0 0 NA NA NA 5 3 3 36.03 66.59 33.41 0 3 4 Whitelist OV-AU 0.62 0 0 0 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 6 0.01 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-088 X 40387112 40404941 1 1 220 0 1 0 0 0 0.39 0.12 2 0 NA NA NA NA NA NA NA 36.03 99.76 0.01 0 1 2 Whitelist OV-AU 0.62 0.31 0 NA 0.59 0 No OV-AU AOCS-088 OV 0.61 1.92 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579432_GG_-,CN:1 3 OV-AU DO46368 AOCS-088 female deceased C56 57 2879 2879 NA Included Ovary-AdenoCA OV AU 1 94.7 OV-AU::AOCS-090 1 44319647 113217814 2 5 334 0 4 0 0 1 0.01 1 15 0 0 15 6 11 42 6 13 53.32 96.77 0 0 4 3 Whitelist OV-AU 0.45 1 0 0 0.16 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 9 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 2 27681209 231678636 1 12 334 2 10 0 0 0 0 0.03 17 0 0 17 5 13 18 5 9 53.32 77.39 22.52 0 3 4 Whitelist OV-AU 0.01 0.11 0 0 0.01 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 24 0.04 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 3 9984390 197783607 1 20 334 6 8 0 1 5 0.01 0.59 34 0 0 34 9 19 35 10 10 53.32 60.95 38.9 0 3 2 Whitelist OV-AU 0.3 0.81 0 0 0.16 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 35 0.05 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 4 135409250 135456402 2 2 334 0 0 1 1 0 0.57 0.19 3 0 0 NA NA NA 27 5 5 53.32 5.5 94.47 0 2 3 Whitelist OV-AU 0.68 0.41 0 0 0.64 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 4 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 5 6366275 168079250 1 17 334 4 6 1 0 6 0.04 0.65 28 0 0 28 10 22 30 10 10 53.32 95.77 1.57 0 4 3 Whitelist OV-AU 7_8 0.87 0.86 0 0 0.41 1 Linked to high confidence OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA With other complex events 28 0.04 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 6 6432363 151913472 1 6 334 1 5 0 0 0 0.01 0 12 0 0 12 6 8 13 7 7 53.32 1.54 98.34 0 2 3 Whitelist OV-AU 0.25 0 0 0 0.19 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 12 0.02 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 7 23177431 114430504 1 5 334 0 3 0 0 2 0.03 0 5 0 0 5 5 5 5 5 5 53.32 99.78 0 0 3 4 Whitelist OV-AU 5 0.62 0.03 0 0 0.33 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 8 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 8 8519924 34671479 8 12 334 1 3 1 3 4 0.57 0.21 18 0 0 18 7 16 29 8 8 53.32 66.23 29.66 0 2 1 Whitelist OV-AU 13_5 0.68 0.44 0 0 0.64 1 High confidence OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA With other complex events 20 0.03 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 9 8476987 129102383 1 3 334 0 3 0 0 0 0.03 0.32 7 0 0 7 5 6 13 7 8 53.32 49.9 49.43 0 2 3 Whitelist OV-AU 0.41 0.57 0 0 0.33 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 6 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 10 11417451 104002149 1 9 334 0 6 1 0 2 0 0.11 11 0 0 11 7 11 12 8 8 53.32 15.57 84.25 0 2 1 Whitelist OV-AU 0.15 0.3 0 0 0.09 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 16 0.02 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 11 120934193 121263578 6 7 334 1 2 1 2 1 0.88 0 5 0 0 5 0 3 51 7 7 53.32 65.19 34.34 0 5 6 Whitelist OV-AU 0.77 0 0 0 0.91 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 13 0.02 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 12 26774286 28338242 2 2 334 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 28 9 16 53.32 95.65 0 0 4 NA Whitelist OV-AU 0.68 0 0 0 0.64 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 4 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 13 20915954 32359355 7 9 334 1 2 2 2 2 0.93 0.02 9 0 0 9 9 9 20 12 12 53.32 68.27 31.73 0 2 1 Whitelist OV-AU 0.68 0.07 0 0 0.95 1 High confidence OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA Canonical without polyploidization 16 0.02 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 14 21628031 65859347 1 3 334 1 1 0 0 1 0.57 0.75 5 0 0 5 5 5 11 11 11 53.32 2.54 93.75 0 2 3 Whitelist OV-AU 0.87 0.92 0 0 0.64 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 5 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 15 20872166 74310896 1 4 334 0 4 0 0 0 0.01 0.4 7 0 0 7 5 7 10 6 10 53.32 59.68 35.54 0 1 2 Whitelist OV-AU 0.21 0.65 0 0 0.16 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 8 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 16 27935277 67537393 1 5 334 0 3 0 1 1 0.11 0.87 6 0 0 6 3 5 9 4 6 53.32 47.09 48.16 0 3 2 Whitelist OV-AU 0.62 1 0 0 0.48 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 9 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 17 6947965 65713817 1 8 334 1 5 1 0 1 0.04 0.87 18 0 0 18 7 12 18 7 12 53.32 47.8 46.94 0 3 2 Whitelist OV-AU 0.54 1 0 0 0.38 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 15 0.02 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 18 13783166 74769691 1 12 334 1 6 1 1 3 0.04 0.31 20 0 0 20 4 6 22 4 6 53.32 20.69 74.66 0 3 2 Whitelist OV-AU 0.54 0.55 0 0 0.4 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 21 0.03 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 19 36827818 51385886 14 15 334 5 6 1 2 1 0.18 0 34 0 0 34 5 9 54 5 9 53.32 63.34 36.48 2 6 2 Whitelist OV-AU 0.62 0 0 0 0.59 1 Low confidence OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA With other complex events 29 0.04 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 20 32371867 33739083 2 2 334 0 2 0 0 0 0.11 0.57 5 0 0 5 3 5 7 3 3 53.32 98.94 0 0 5 3 Whitelist OV-AU 0.54 0.79 0 0 0.48 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 4 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 21 NA NA 0 0 334 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 22 23500636 23929870 2 3 334 1 0 1 0 1 0.57 0.02 2 0 0 NA NA NA 9 9 9 53.32 3.07 96.93 0 2 3 Whitelist OV-AU 0.87 0.08 0 0 0.64 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 5 0.01 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-090 X 22999843 146769054 1 13 334 1 6 1 0 5 0.01 0.45 20 0 0 20 5 15 22 5 8 53.32 20.15 79.62 0 2 3 Whitelist OV-AU 0.54 0.7 0 0 0.21 1 No OV-AU AOCS-090 OV 0.78 2.65 Ovary-AdenoCA NA 21 0.03 NA 3 OV-AU DO46370 AOCS-090 female deceased C56 54 1727 1727 NA Included Ovary-AdenoCA OV AU 1 56.81 OV-AU::AOCS-091 1 116702992 117008647 4 4 347 0 1 1 2 0 0.57 0.84 4 0 0 4 0 3 28 4 5 74.41 51.11 48.89 0 3 4 Whitelist OV-AU 0.68 0.98 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 8 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 2 3886207 191136840 8 13 347 1 1 3 3 5 0.57 0.02 27 0 0 27 9 14 41 16 21 74.41 98.46 1.45 0 4 3 Whitelist OV-AU 0.99 0.08 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 21 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 False positive; manually removed OV-AU::AOCS-091 3 138111100 180457302 5 9 347 3 2 0 0 4 0.14 0 18 0 0 18 4 5 44 4 8 74.41 68.11 28.74 0 4 8 Whitelist OV-AU 9 0.28 0 0 0 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 14 0.02 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 4 88195011 117920513 3 3 347 0 0 2 1 0 0.3 1 5 0 0 5 5 5 23 8 10 74.41 88.22 11.67 0 3 2 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 5 169200847 173419988 2 2 347 0 0 1 1 0 0.57 0.74 1 0 0 NA NA NA 15 4 5 74.41 56.12 43.73 0 4 NA Whitelist OV-AU 0.68 0.91 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 6 13090101 148252116 1 16 347 3 2 0 0 11 0.14 0.57 22 0 0 22 3 8 25 5 7 74.41 53.32 46.43 0 5 2 Whitelist OV-AU 10_8 0.54 0.8 0 0 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 21 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 7 1000402 142755028 1 11 347 1 6 0 0 4 0 0.12 16 0 0 16 5 6 18 5 10 74.41 95.25 4.51 0 4 5 Whitelist OV-AU 0.34 0.31 0 0 0.09 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 18 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 8 16657311 144995063 1 34 347 7 11 0 0 16 0 0 51 0 0 51 7 7 51 7 8 74.41 96.58 0 0 6 9 Whitelist OV-AU X 0.54 0 0 0 0.02 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 52 0.07 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 9 8617787 79460625 1 3 347 0 2 0 0 1 0.11 1 7 0 0 7 5 7 10 6 6 74.41 71.61 28.22 0 3 2 Whitelist OV-AU 0.41 1 0 0 0.48 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 5 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 10 43589811 125425309 2 9 347 0 0 1 1 7 0.57 0.2 12 0 0 12 6 10 21 6 6 74.41 99.86 0 0 4 3 Whitelist OV-AU 12_X 0.41 0.42 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 11 0.02 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 11 18956645 121705048 1 10 347 2 2 0 1 5 0.53 0.44 9 0 0 9 3 5 14 3 8 74.41 82.8 16.77 0 3 4 Whitelist OV-AU 0.68 0.69 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 15 0.02 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 12 51651118 120622342 1 14 347 2 5 0 0 7 0.02 0.01 13 0 0 13 6 8 27 6 9 74.41 99.09 0.83 1 3 4 Whitelist OV-AU 0.62 0.03 0 0 0.33 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 21 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 13 43721599 97989225 1 2 347 1 1 0 0 0 0.57 0.04 2 0 0 NA NA NA 5 3 3 74.41 52.74 47.12 0 2 3 Whitelist OV-AU 0.68 0.13 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 14 28846105 81927914 1 6 347 0 5 0 0 1 0 0.28 11 0 0 11 5 6 12 5 7 74.41 99.09 0 0 4 3 Whitelist OV-AU 0.25 0.52 0 0 0.07 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 11 0.02 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 15 29800190 75135892 1 13 347 1 4 0 0 8 0.04 0.01 11 0 0 11 7 11 20 7 7 74.41 95.08 0 0 3 4 Whitelist OV-AU 0.8 0.06 0 0 0.36 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 18 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 16 47234801 48874909 2 2 347 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 12 7 7 74.41 81.63 13.71 0 2 NA Whitelist OV-AU 0.68 0.04 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 17 36557348 68378035 1 5 347 0 3 0 0 2 0.03 0.74 5 0 0 5 4 5 10 4 8 74.41 24.73 75.25 0 2 3 Whitelist OV-AU 0.62 0.91 0 0 0.33 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 8 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 18 31107128 31515323 1 1 347 0 0 1 0 0 0.39 0.09 2 0 NA NA NA NA 5 0 0 74.41 78.03 21.93 0 2 3 Whitelist OV-AU 0.62 0.26 0 NA 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 2 0 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 19 10476949 56573099 1 7 347 1 1 1 0 4 0.8 0.56 9 0 0 9 3 5 9 3 5 74.41 78.36 21.23 0 3 0 Whitelist OV-AU 12 0.96 0.79 0 0 0.84 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 10 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 20 55846347 55953185 1 1 347 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 7 0 5 74.41 23.28 69.68 0 5 NA Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 2 0 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 21 19225220 19254892 1 1 347 0 0 1 0 0 0.39 0.33 3 0 NA NA NA NA 7 3 5 74.41 56.08 21.28 0 4 5 Whitelist OV-AU 0.62 0.58 0 NA 0.59 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 2 0 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 22 37112158 46739828 2 2 347 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 4 0 0 74.41 91.1 8.9 0 2 3 Whitelist OV-AU 0.68 0.09 0 0 0.64 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-091 X 31409592 135225515 1 15 347 3 3 0 0 9 0.11 0.11 17 0 0 17 5 8 23 5 5 74.41 92.31 7.46 0 4 0 Whitelist OV-AU 10_8 0.93 0.29 0 0 0.48 0 No OV-AU AOCS-091 OV 0.74 3.31 Ovary-AdenoCA NA 21 0.03 stopgain,17_7578493_T_C,CN:2 4 OV-AU DO46372 AOCS-091 female deceased C56 39 1326 1326 NA Included Ovary-AdenoCA OV AU 1 43.62 OV-AU::AOCS-092 1 10502193 156217834 2 7 209 2 0 1 1 3 0.57 0.07 25 0 0 25 7 9 32 7 9 80.48 99.61 0.05 0 4 5 Whitelist OV-AU 8 0.77 0.21 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 2 122714319 216764990 6 6 209 2 0 2 2 0 0.57 0.04 23 0 0 23 10 23 38 11 11 80.48 97.24 0.07 1 4 3 Whitelist OV-AU 0.68 0.15 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 3 116333810 116642478 2 2 209 2 0 0 0 0 0.11 0.5 6 0 0 6 3 5 22 5 7 80.48 96.78 0.07 0 7 5 Whitelist OV-AU 0.54 0.74 0 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 4 18991656 19647909 2 2 209 2 0 0 0 0 0.11 0.49 4 0 0 4 3 4 12 7 7 80.48 73.81 25.96 0 2 1 Whitelist OV-AU 0.54 0.73 0 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 5 148912658 149377394 2 2 209 0 2 0 0 0 0.11 0.03 4 0 0 4 3 4 29 7 7 80.48 99.85 0 0 6 5 Whitelist OV-AU 0.54 0.12 0 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 6 7028958 126090643 1 11 209 5 2 1 0 3 0.07 1 20 0 0 20 9 11 21 9 9 80.48 95.66 0.98 0 3 4 Whitelist OV-AU 0.41 1 0 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 7 6073651 127466609 1 10 209 7 3 0 0 0 0 1 22 0 0 22 11 17 23 11 17 80.48 99.93 0 0 5 4 Whitelist OV-AU 0.18 1 0 0 0.14 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 8 16535103 145010476 1 14 209 2 8 1 0 3 0 0.02 29 0 0 29 5 12 29 5 5 80.48 78.88 17.6 0 6 7 Whitelist OV-AU 1 0.21 0.07 0 0 0.09 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 25 0.06 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 9 28321343 28418097 1 1 209 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 80.48 0.37 99.49 0 1 2 Whitelist OV-AU 0.62 0.02 NA NA 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 10 11823916 106148578 1 6 209 2 1 0 1 2 0.57 0.51 12 0 0 12 3 4 13 4 4 80.48 99.78 0.05 0 3 2 Whitelist OV-AU 0.68 0.75 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 11 17077899 78863582 1 8 209 3 2 0 0 3 0.14 0.62 10 0 0 10 3 8 13 3 8 80.48 99.45 0.13 0 3 5 Whitelist OV-AU 0.62 0.83 0 0 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 12 12056719 113928391 1 11 209 6 4 0 0 1 0.01 0.41 21 0 0 21 5 21 22 5 5 80.48 95.2 0.39 0 3 4 Whitelist OV-AU 0.21 0.66 0 0 0.23 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 21 0.05 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 13 84558469 107810609 1 5 209 2 2 0 0 1 0.26 0.7 9 0 0 9 3 9 10 3 3 80.48 100 0 0 6 5 Whitelist OV-AU 0.62 0.9 0 0 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 14 21310689 102474165 1 5 209 2 3 0 0 0 0.14 0.69 10 0 0 10 5 5 11 5 5 80.48 99.09 0 0 3 4 Whitelist OV-AU 0.62 0.89 0 0 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 15 79491098 79626928 1 1 209 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 80.48 0.13 99.77 0 1 2 Whitelist OV-AU 0.62 0.12 NA NA 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 16 11855076 78629060 1 5 209 3 1 0 0 1 0.11 0.28 8 0 0 8 4 4 10 5 6 80.48 99.78 0.11 0 3 4 Whitelist OV-AU 0.62 0.52 0 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 17 7428574 73565643 1 7 209 2 3 0 0 2 0.14 0.08 11 0 0 11 4 7 13 4 9 80.48 100 0 0 3 5 Whitelist OV-AU 0.54 0.23 0 0 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 18 19402966 45039370 2 3 209 1 0 1 0 1 0.57 0.52 21 0 0 21 4 5 23 5 5 80.48 12.73 82.62 0 2 5 Whitelist OV-AU 0.62 0.76 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 19 56501931 57245191 2 2 209 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 19 3 6 80.48 92.72 0 0 4 5 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 20 17805646 36308398 1 2 209 0 2 0 0 0 0.11 0.34 4 NA 0 4 3 4 5 3 5 80.48 98.93 0 0 6 7 Whitelist OV-AU 0.54 0.59 NA 0 0.48 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 21 NA NA 0 0 209 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.76 NA NA NA 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 22 36143456 37934929 1 2 209 0 1 0 1 0 0.57 0.32 3 0 0 NA NA NA 6 5 5 80.48 97.3 2.7 0 4 3 Whitelist OV-AU 0.68 0.57 0 0 0.64 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-092 X 128101679 128177592 1 1 209 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 3 3 80.48 54.02 45.75 0 2 3 Whitelist OV-AU 0.62 0.05 NA NA 0.59 0 No OV-AU AOCS-092 OV 0.59 3.83 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578416_A_C,CN:3 3 OV-AU DO46374 AOCS-092 female deceased C56 69 1409 1409 NA Included Ovary-AdenoCA OV AU 1 46.35 OV-AU::AOCS-093 1 896147 207837866 1 15 297 4 4 1 0 6 0.13 0.33 14 0 0 14 4 10 15 5 7 40.33 20.81 79.19 0 2 3 Whitelist OV-AU 6_7 0.62 0.58 0 0 0.55 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 2 125326527 209102160 3 3 297 0 0 1 2 0 0.3 0.75 12 0 0 12 5 8 23 7 8 40.33 41.08 58.82 0 2 3 Whitelist OV-AU 0.62 0.92 0 0 0.59 1 Linked to high confidence OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA With other complex events 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 3 32073975 118218549 4 7 297 1 1 1 1 3 1 1 7 0 0 7 5 7 14 5 5 40.33 40 59.83 0 2 3 Whitelist OV-AU 0.77 1 0 0 1 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 4 1895208 181137268 1 11 297 7 1 0 0 3 0 0.82 9 0 0 9 7 9 9 7 7 40.33 18.45 81.54 0 2 1 Whitelist OV-AU 0.13 0.96 0 0 0.04 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 5 41529981 132155656 1 4 297 1 1 1 0 1 0.8 0.47 5 0 0 5 5 5 6 6 6 40.33 68.82 31.05 0 1 2 Whitelist OV-AU 0.68 0.72 0 0 0.84 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 6 14053161 167581135 1 20 297 6 3 1 1 9 0.11 0.02 23 0 0 23 13 22 26 13 13 40.33 23.16 76.58 0 2 1 Whitelist OV-AU 1 0.62 0.08 0 0 0.48 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 31 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 7 27432158 135138151 1 6 297 0 3 0 0 3 0.03 0.37 5 0 0 5 5 5 7 7 7 40.33 18.05 81.72 0 2 1 Whitelist OV-AU 1 0.68 0.62 0 0 0.33 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 8 31719892 145688405 1 10 297 1 2 0 1 6 0.57 0.79 11 0 0 11 4 7 12 4 5 40.33 36.85 62.58 0 2 3 Whitelist OV-AU 4 0.47 0.94 0 0 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 9 NA NA 0 0 297 0 0 0 0 0 NA 0.1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.26 0 NA NA 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 10 5820224 113856854 1 8 297 3 1 0 0 4 0.11 1 7 0 0 7 4 7 10 6 9 40.33 21.5 74.9 0 3 2 Whitelist OV-AU 0.62 1 0 0 0.48 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 11 15469782 113064966 1 11 297 5 1 0 0 5 0.01 0.27 15 0 0 15 8 11 17 8 8 40.33 85.86 13.72 0 1 2 Whitelist OV-AU 0.54 0.51 0 0 0.19 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 12 28314407 126427633 1 5 297 1 2 1 0 1 0.57 0.49 5 0 0 5 5 5 9 7 7 40.33 52.38 47.54 0 2 1 Whitelist OV-AU 0.62 0.74 0 0 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 13 31521128 105978091 49 53 297 12 14 13 10 4 0.87 0 70 0 0 70 70 70 71 71 71 40.33 89.45 10.55 2 1 2 Whitelist OV-AU 2 0.95 0 0 0 0.91 1 High confidence OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA Canonical without polyploidization 102 0.17 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 14 90441023 102068650 2 5 297 0 0 1 1 3 0.57 0.02 6 0 0 6 3 6 17 6 14 40.33 55.02 44.06 0 3 2 Whitelist OV-AU 2 0.62 0.07 0 0 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 15 35524588 95454588 1 3 297 2 1 0 0 0 0.3 0.16 6 0 0 6 4 6 7 5 5 40.33 24.14 75.86 0 2 1 Whitelist OV-AU 0.62 0.36 0 0 0.59 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 16 58375909 89660213 1 3 297 2 1 0 0 0 0.3 1 4 0 0 4 4 4 7 7 7 40.33 22.93 76.21 0 1 2 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 17 1449722 71323193 1 4 297 1 1 0 0 2 0.57 1 4 0.12 0.08 4 3 4 10 4 4 40.33 99.31 0.68 0 1 0 Whitelist OV-AU 0.62 1 0.12 0.08 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 18 32220058 70222657 2 3 297 0 0 1 1 1 0.57 0.86 1 0 0 NA NA NA NA NA NA 40.33 0.08 99.88 0 2 NA Whitelist OV-AU 0.62 0.99 0 0 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 19 19782097 43697139 1 4 297 1 2 0 1 0 0.57 0.02 5 0 0 5 5 5 8 7 7 40.33 19.85 79.97 0 2 3 Whitelist OV-AU 0.68 0.08 0 0 0.64 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 20 21856341 21922264 1 1 297 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 40.33 29.55 69.48 0 2 NA Whitelist OV-AU 0.62 0.68 NA NA 0.59 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 21 35683960 37741712 1 2 297 1 0 0 0 1 0.39 0.79 2 NA NA NA NA NA 8 8 8 40.33 23.13 54.22 0 1 2 Whitelist OV-AU 0.54 0.94 NA NA 0.59 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 22 30246213 30273605 1 1 297 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 40.33 99.95 0.05 0 1 2 Whitelist OV-AU 0.62 0.52 NA NA 0.59 1 No OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-093 X 43850055 121298336 1 8 297 0 1 1 2 4 0.57 0.69 5 0 0 5 3 5 5 3 3 40.33 99.76 0.01 0 1 0 Whitelist OV-AU 13 0.87 0.89 0 0 0.64 1 Linked to high confidence OV-AU AOCS-093 OV 0.47 1.78 Ovary-AdenoCA Canonical without polyploidization 12 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 1 OV-AU DO46376 AOCS-093 female deceased C56 58 1430 1430 NA Included Ovary-AdenoCA OV AU 1 47.04 OV-AU::AOCS-094 1 15943355 242325720 1 52 604 9 13 1 1 28 0 0 73 0 0 73 11 12 79 11 13 60.89 71.77 28.23 0 3 4 Whitelist OV-AU 10_14 0.62 0 0 0 0.03 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 76 0.06 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 2 114760836 115298441 3 3 604 0 1 1 1 0 0.8 0.42 5 0 0 5 0 3 42 13 13 60.89 30.39 66.62 0 2 3 Whitelist OV-AU 0.87 0.67 0 0 0.84 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 6 0 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 3 39326574 46465202 10 10 604 4 4 0 2 0 0.22 0.43 7 0 0 7 3 7 50 7 9 60.89 70.63 26.3 0 3 2 Whitelist OV-AU 0.62 0.68 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 20 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 4 7067402 48502680 3 4 604 1 0 1 1 1 0.8 0.02 13 0 0 13 5 9 22 5 5 60.89 38.19 59.44 0 2 1 Whitelist OV-AU 0.68 0.07 0 0 0.84 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 7 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 5 65343017 65640013 5 5 604 1 2 1 1 0 0.9 0.56 5 0 0 5 3 5 41 7 13 60.89 69.88 29.96 0 1 2 Whitelist OV-AU 0.93 0.78 0 0 0.92 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 10 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 6 41123088 100990123 12 18 604 3 4 3 2 6 0.88 0 29 0 0 29 8 29 63 9 9 60.89 60.45 36.72 0 3 4 Whitelist OV-AU 0.68 0.02 0 0 0.91 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 30 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 False positive; manually removed OV-AU::AOCS-094 7 87058924 138882653 3 6 604 2 0 1 0 3 0.3 0.65 15 0 0 15 5 7 43 7 7 60.89 83.67 16.11 0 3 2 Whitelist OV-AU 0.68 0.86 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 9 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 8 50792790 91309640 2 11 604 0 0 2 2 7 0.26 0.09 19 0 0 19 5 5 49 9 9 60.89 83.09 16.89 0 3 4 Whitelist OV-AU 17_9 0.74 0.26 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 15 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 9 12389551 123564857 1 15 604 2 6 1 1 5 0.08 0.92 21 0 0 21 7 15 22 7 15 60.89 38.16 61.14 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.48 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 25 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 10 72579808 134111126 2 7 604 1 0 0 1 5 0.57 0.63 11 0 0 11 7 11 20 7 10 60.89 87.36 12.46 0 3 2 Whitelist OV-AU 17 0.96 0.84 0 0 0.64 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 9 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 11 73922285 126839491 5 12 604 1 1 3 0 7 0.28 0.03 18 0 0 18 4 7 32 7 7 60.89 55.51 44.06 0 3 2 Whitelist OV-AU 8 0.68 0.1 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 17 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 12 7607670 14380884 2 6 604 0 0 1 1 4 0.57 0 5 0 0 5 3 3 44 8 11 60.89 90.56 9.36 0 4 5 Whitelist OV-AU 0.62 0 0 0 0.64 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 8 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 13 72543449 99241093 1 3 604 1 1 0 0 1 0.57 0.01 5 0 0 5 3 3 7 3 5 60.89 43.93 56.07 0 2 3 Whitelist OV-AU 0.62 0.03 0 0 0.64 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 5 0 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 14 35603063 81982043 1 17 604 4 5 0 0 8 0.03 0.03 21 0 0 21 7 7 28 7 9 60.89 89.55 9.53 0 4 5 Whitelist OV-AU 1 0.62 0.1 0 0 0.33 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 26 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 15 52307925 79161464 1 10 604 1 4 0 0 5 0.04 0.27 5 0 0 5 4 5 13 6 6 60.89 65 34.9 0 2 3 Whitelist OV-AU 19_4 0.3 0.51 0 0 0.36 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 15 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 16 4082550 85754839 1 14 604 2 2 1 0 9 0.53 0.06 18 0 0 18 8 9 19 8 9 60.89 31.54 68.36 0 1 2 Whitelist OV-AU 7 0.62 0.18 0 0 0.64 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 19 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 17 35381505 55935058 3 6 604 0 2 1 0 3 0.3 0.38 9 0 0 9 6 9 23 6 9 60.89 34.26 65.74 0 3 4 Whitelist OV-AU 8 0.62 0.63 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 9 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 18 28457926 73054420 1 6 604 2 1 1 1 1 0.9 0.08 8 0 0 8 4 6 10 4 6 60.89 40.08 59.88 0 2 1 Whitelist OV-AU 0.93 0.22 0 0 0.92 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 11 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 19 35566735 45168798 10 12 604 2 1 5 2 2 0.31 0 13 0 0 13 5 7 26 5 5 60.89 62.34 30.38 0 3 4 Whitelist OV-AU 15 0.68 0 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 22 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 20 8833686 36218377 1 9 604 1 3 0 0 5 0.11 0 11 0 0 11 4 8 18 5 6 60.89 99.03 0 0 4 5 Whitelist OV-AU 0.68 0 0 0 0.48 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 13 0.01 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 21 16769664 38658058 1 4 604 1 1 0 0 2 0.57 0.46 8 0 0 8 3 4 12 3 5 60.89 47.38 30.35 0 3 1 Whitelist OV-AU 1 0.71 0 0 0.64 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 6 0 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 22 46214503 46598377 3 3 604 0 2 0 1 0 0.3 0.04 4 0 0 4 3 4 11 5 11 60.89 75.65 24.35 0 2 3 Whitelist OV-AU 0.62 0.13 0 0 0.59 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 6 0 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-094 X 18850169 152426350 9 14 604 3 2 2 2 5 0.95 0.58 19 0 0 19 5 12 21 5 5 60.89 83.54 13.08 0 4 5 Whitelist OV-AU 0.9 0.8 0 0 0.97 0 No OV-AU AOCS-094 OV 0.73 2.78 Ovary-AdenoCA NA 23 0.02 stopgain,17_7574003_A_G,CN:2 3 OV-AU DO46378 AOCS-094 female alive C56 59 843 843 NA Included Ovary-AdenoCA OV AU 1 27.73 OV-AU::AOCS-095 1 8232019 213282276 1 9 209 1 6 0 0 2 0 0.2 7 0 0 7 7 7 7 7 7 34.98 0.07 99.93 0 2 3 Whitelist OV-AU 0.48 0.42 0 0 0.09 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 16 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 2 221772474 221860951 3 3 209 1 0 1 1 0 0.8 0.04 1 0 0 NA NA NA 16 5 5 34.98 23.65 73.66 0 2 NA Whitelist OV-AU 0.87 0.15 0 0 0.84 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 3 373427 175778044 1 12 209 4 5 0 0 3 0.03 0.1 18 0 0 18 6 16 19 6 6 34.98 30.52 69.34 0 3 2 Whitelist OV-AU 0.62 0.27 0 0 0.33 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 21 0.05 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 4 14169897 31589123 16 18 209 2 3 5 6 2 0.48 0 14 0 0 14 6 14 25 7 7 34.98 24.13 75.67 0 2 4 Whitelist OV-AU 0.62 0 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 34 0.08 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 5 58355210 162939307 1 9 209 2 5 0 0 2 0.02 0.89 8 0 0 8 5 8 9 5 5 34.98 4.33 95.55 0 2 1 Whitelist OV-AU 0.41 1 0 0 0.33 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 16 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 6 30127145 108912374 1 7 209 2 2 1 1 1 0.88 0.38 3 0 0 NA NA NA 8 7 7 34.98 58.93 40.93 0 1 2 Whitelist OV-AU 0.77 0.63 0 0 0.91 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 7 22677203 159121586 1 5 209 2 1 0 1 1 0.57 0.12 13 0 0 13 5 10 14 6 6 34.98 62.94 34.67 0 2 1 Whitelist OV-AU 0.93 0.31 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 8 85412569 143918723 1 14 209 4 2 0 0 8 0.06 0.02 15 0 0 15 3 5 23 8 8 34.98 89.76 10.13 0 2 3 Whitelist OV-AU 4 0.62 0.07 0 0 0.48 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 9 133387102 133406644 2 2 209 0 0 1 1 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 34.98 42.36 57.5 0 3 NA Whitelist OV-AU 0.68 0.72 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 10 12952220 99423226 1 6 209 2 4 0 0 0 0.06 0.02 6 0 0 6 5 6 8 5 5 34.98 8.38 91.44 0 2 3 Whitelist OV-AU 0.54 0.08 0 0 0.48 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 11 38963051 111490260 1 7 209 1 3 0 0 3 0.11 0.41 5 0 0 5 3 5 11 5 5 34.98 42.88 56.56 0 2 3 Whitelist OV-AU 0.62 0.66 0 0 0.48 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 12 19369564 100371643 1 3 209 1 1 0 0 1 0.57 0.14 5 0 0 5 3 5 5 3 5 34.98 6.19 90.07 0 2 0 Whitelist OV-AU 0.62 0.33 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 13 42357865 42369790 1 1 209 0 1 0 0 0 0.39 0.57 1 0 NA NA NA NA 4 3 3 34.98 58.94 41.06 0 2 NA Whitelist OV-AU 0.62 0.79 0 NA 0.59 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 14 78008124 105586411 1 3 209 0 2 0 0 1 0.11 0.43 4 0 0 4 0 3 5 0 3 34.98 5.22 91.07 0 2 3 Whitelist OV-AU 0.41 0.68 0 0 0.48 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 15 25589608 85292040 1 9 209 2 5 0 0 2 0.02 0.05 10 0 0 10 7 10 11 7 7 34.98 0.9 98.98 0 2 3 Whitelist OV-AU 0.62 0.17 0 0 0.33 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 16 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 16 19650983 35053543 1 2 209 0 1 0 1 0 0.57 0.67 2 0 0 NA NA NA 6 4 5 34.98 54.33 45.58 0 2 3 Whitelist OV-AU 0.68 0.87 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 17 95567 53950046 1 2 209 0 1 1 0 0 0.57 0.52 2 0 0 NA NA NA 4 0 4 34.98 72.42 27.56 0 1 2 Whitelist OV-AU 0.68 0.76 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 18 35956022 43778569 1 2 209 1 1 0 0 0 0.57 0.67 4 0 0 4 3 4 5 3 3 34.98 99.91 0.05 0 1 0 Whitelist OV-AU 0.68 0.87 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 19 35781101 46132023 1 2 209 1 1 0 0 0 0.57 0.31 2 0 0 NA NA NA 4 3 3 34.98 11.88 87.95 0 2 3 Whitelist OV-AU 0.68 0.56 0 0 0.64 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 20 NA NA 0 0 209 0 0 0 0 0 NA 0.81 NA 0.07 NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist OV-AU NA 0.95 0.07 NA NA 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 21 44198297 44210130 1 1 209 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 5 3 3 34.98 10.12 67.61 0 2 NA Whitelist OV-AU 0.62 0.01 0 NA 0.59 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 22 NA NA 0 0 209 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-095 X 86625036 142350725 1 5 209 3 2 0 0 0 0.14 0.75 8 0 0 8 5 8 11 5 5 34.98 56.71 42.8 0 2 1 Whitelist OV-AU 0.62 0.92 0 0 0.59 0 No OV-AU AOCS-095 OV 0.85 1.89 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-AU DO46380 AOCS-095 female deceased C56 51 1423 1423 NA Included Ovary-AdenoCA OV AU 1 46.81 OV-AU::AOCS-096 1 154958224 229439905 2 4 197 1 3 0 0 0 0.11 0.03 21 0 0 21 6 9 40 15 15 66.99 99.98 0 0 5 4 Whitelist OV-AU 0.54 0.12 0 0 0.48 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 2 32740206 220540970 1 8 197 1 7 0 0 0 0 0.03 13 0 0 13 3 10 14 3 10 66.99 99.89 0 0 4 5 Whitelist OV-AU 0.06 0.1 0 0 0.04 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 16 0.04 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 3 967694 180645313 1 17 197 2 7 1 0 7 0.01 0.26 29 0 0 29 10 11 29 10 10 66.99 99.85 0 0 3 4 Whitelist OV-AU 1_19 0.62 0.5 0 0 0.19 1 Linked to low confidence OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA With other complex events 27 0.07 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 4 40262005 187000429 1 3 197 0 1 1 1 0 0.8 0 4 0 0 4 3 4 5 3 3 66.99 10.57 89.24 0 2 1 Whitelist OV-AU 0.87 0.01 0 0 0.84 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 6 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 5 129143431 180006098 5 6 197 2 1 1 1 1 0.9 0.46 16 0 0 16 6 6 23 6 6 66.99 97.33 0 0 5 3 Whitelist OV-AU 0.93 0.7 0 0 0.92 1 Linked to low confidence OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA With other complex events 11 0.03 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 6 151859727 152137955 2 2 197 0 2 0 0 0 0.11 0.55 3 0 0 NA NA NA 13 8 13 66.99 88.89 10.96 0 2 3 Whitelist OV-AU 0.54 0.77 0 0 0.48 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 7 76937734 77025684 3 3 197 1 0 1 1 0 0.8 0.87 2 0 0 NA NA NA 11 5 5 66.99 99.78 0 0 4 5 Whitelist OV-AU 0.87 1 0 0 0.84 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 6 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 8 27233214 42882763 2 4 197 0 4 0 0 0 0.01 0.42 4 0 0 4 0 3 8 4 5 66.99 99.95 0.04 0 4 5 Whitelist OV-AU 0.21 0.67 0 0 0.16 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 9 32787856 116371943 1 5 197 0 3 0 0 2 0.03 0.46 8 0 0 8 6 6 8 6 6 66.99 1.06 98.24 0 2 3 Whitelist OV-AU 0.62 0.7 0 0 0.33 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 10 71424316 116957323 2 5 197 0 1 1 0 3 0.57 0.61 6 0 0 6 3 3 6 3 3 66.99 99.82 0 0 4 3 Whitelist OV-AU 0.68 0.82 0 0 0.64 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 7 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 11 71670904 121594818 1 5 197 0 5 0 0 0 0 0.23 11 0 0 11 4 7 12 4 4 66.99 49.37 50.07 0 5 3 Whitelist OV-AU 0.1 0.47 0 0 0.07 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 10 0.03 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 12 6219675 113746116 4 5 197 0 0 2 2 1 0.26 0.5 13 0 0 13 5 9 16 5 11 66.99 96.62 3.3 0 4 3 Whitelist OV-AU 0.68 0.74 0 0 0.59 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 9 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 13 56212396 69555802 10 10 197 3 3 2 2 0 0.94 0 27 0 0 27 11 27 33 11 11 66.99 99.53 0.01 16 4 5 Whitelist OV-AU 0.96 0.01 0 0 0.96 1 High confidence OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA With other complex events 20 0.05 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 14 59276868 101130143 1 5 197 1 4 0 0 0 0.04 0.84 12 0 0 12 6 12 13 7 7 66.99 3.99 95.1 0 2 3 Whitelist OV-AU 0.45 0.97 0 0 0.36 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 10 0.03 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 15 91360235 93655521 1 2 197 0 2 0 0 0 0.11 0.19 4 NA 0 4 4 4 5 5 5 66.99 0.89 99.11 0 2 3 Whitelist OV-AU 0.54 0.41 NA 0 0.48 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 16 2194068 89656116 1 7 197 0 4 0 0 3 0.01 0.38 9 0 0 9 9 9 10 10 10 66.99 1.65 97.47 0 3 2 Whitelist OV-AU 0.47 0.63 0 0 0.16 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 11 0.03 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 17 6837884 79840758 14 14 197 1 3 5 5 0 0.37 0 22 0 0 22 6 9 22 6 9 66.99 4.34 95.65 0 2 3 Whitelist OV-AU 0.62 0 0 0 0.59 1 Low confidence OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA With other complex events 28 0.07 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 18 46997019 61591330 1 2 197 0 2 0 0 0 0.11 0.18 4 NA 0 4 3 4 5 3 5 66.99 99.96 0 0 3 4 Whitelist OV-AU 0.54 0.4 NA 0 0.48 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 19 12910667 55473944 10 14 197 3 4 2 1 4 0.57 0 43 0 0 43 5 9 47 5 7 66.99 66.81 25.35 0 5 4 Whitelist OV-AU 3_5 0.98 0 0 0 0.64 1 Low confidence OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA With other complex events 24 0.06 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 20 32591843 32971169 4 4 197 0 1 1 2 0 0.57 0.04 1 0 0 NA NA NA 6 3 5 66.99 92.88 0 0 6 NA Whitelist OV-AU 0.68 0.14 0 0 0.64 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 8 0.02 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 21 NA NA 0 0 197 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 0 0 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 22 38194165 40107797 1 2 197 0 2 0 0 0 0.11 0.09 4 0 0 4 3 4 7 5 7 66.99 100 0 0 3 4 Whitelist OV-AU 0.54 0.24 0 0 0.48 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 4 0.01 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-096 X NA NA 0 0 197 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.16 NA NA NA 1 No OV-AU AOCS-096 OV 0.57 3.38 Ovary-AdenoCA NA 0 0 stopgain,17_7579315_T_G,CN:3 3 OV-AU DO46382 AOCS-096 female deceased C48.2 62 311 311 NA Included Ovary-AdenoCA OV AU 1 10.23 OV-AU::AOCS-097 1 15828920 34169833 6 6 51 2 2 1 1 0 0.88 0 6 0 0 6 6 6 16 11 11 29.5 46.87 53.13 7 1 2 Whitelist OV-AU 0.93 0.01 0 0 0.91 1 Low confidence OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA Canonical without polyploidization 12 0.12 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 2 238919268 238987075 1 1 51 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 29.5 0.03 99.87 0 1 2 Whitelist OV-AU 0.62 0.69 NA NA 0.59 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 2 0.02 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 3 164908941 172533879 1 2 51 1 1 0 0 0 0.57 0.58 1 NA 0 NA NA NA NA NA NA 29.5 0 99.86 0 2 NA Whitelist OV-AU 0.68 0.81 NA 0 0.64 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 4 0.04 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 4 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 5 158999613 159258934 1 1 51 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 29.5 0.14 99.72 0 1 2 Whitelist OV-AU 0.62 0.93 NA NA 0.59 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 2 0.02 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 7 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 10 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 11 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 15 20101979 89639810 25 25 51 6 8 5 6 0 0.86 0 21 0 0 21 10 12 21 10 10 29.5 93.39 1.83 0 3 1 Whitelist OV-AU 0.92 0 0 0 0.9 1 High confidence OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA With other complex events 50 0.49 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 16 69110899 69164833 1 1 51 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.5 0.06 99.83 0 2 3 Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 2 0.02 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 17 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 0 0 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 22 22278902 22346476 1 1 51 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 29.5 100 0 0 1 NA Whitelist OV-AU 0.62 0.7 NA NA 0.59 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 2 0.02 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-097 X 138463369 144588955 1 1 51 0 1 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 29.5 0 99.78 0 2 NA Whitelist OV-AU 0.62 0.91 NA NA 0.59 1 No OV-AU AOCS-097 OV 0.94 1.81 Ovary-AdenoCA NA 2 0.02 NA 2 OV-AU DO46384 AOCS-097 female deceased C56 55 614 614 NA Included Ovary-AdenoCA OV AU 1 20.2 OV-AU::AOCS-104 1 81537443 205272708 1 4 115 1 1 0 0 2 0.57 0.3 3 0 0 NA NA NA 4 3 3 28.31 7.76 92.24 0 2 3 Whitelist OV-AU 1 0.54 0 0 0.64 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 6 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 2 157134523 198183568 1 1 115 0 1 0 0 0 0.39 0.87 2 0 0 NA NA NA 9 5 7 28.31 30.52 69.37 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 3 144472143 177663700 1 3 115 2 0 1 0 0 0.3 0.46 3 0 0 NA NA NA 6 5 5 28.31 0.52 99.45 0 2 1 Whitelist OV-AU 0.62 0.71 0 0 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 6 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 4 69249915 69298341 1 1 115 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 4 4 28.31 45.71 54.08 0 1 2 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 5 56975841 168036621 1 5 115 2 0 0 1 2 0.3 0.08 6 0 0 6 6 6 7 7 7 28.31 26.69 73.18 0 1 2 Whitelist OV-AU 0.68 0.23 0 0 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 8 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 6 22240087 125180385 1 3 115 2 0 0 0 1 0.11 0.69 4 0 0 4 4 4 11 8 8 28.31 59.19 40.67 0 1 2 Whitelist OV-AU 0.62 0.89 0 0 0.48 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 5 0.02 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 7 23141946 36754500 2 3 115 0 0 1 1 1 0.57 0.68 2 0 0 NA NA NA 7 3 3 28.31 67.79 29.48 0 1 2 Whitelist OV-AU 0.62 0.88 0 0 0.64 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 5 0.02 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 8 58620508 104571527 1 3 115 0 2 0 0 1 0.11 0.02 5 0 0 5 5 5 14 9 9 28.31 65.03 34.86 0 3 4 Whitelist OV-AU 0.62 0.07 0 0 0.48 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 5 0.02 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 9 403122 133666038 3 6 115 1 0 1 1 3 0.8 0.02 3 0 0 NA NA NA 5 5 5 28.31 0 99.29 0 2 3 Whitelist OV-AU 0.62 0.06 0 0 0.84 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 9 0.04 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 10 53785685 53815659 1 1 115 1 0 0 0 0 0.39 1 2 0.62 NA NA NA NA NA NA NA 28.31 0.02 99.82 0 1 2 Whitelist OV-AU 0.62 1 0.62 NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 11 890397 27842961 1 4 115 2 0 0 0 2 0.11 0 1 0 0 NA NA NA NA NA NA 28.31 0.01 99.44 0 2 NA Whitelist OV-AU 0.54 0.02 0 0 0.48 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 6 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 12 39067236 78165539 1 4 115 3 1 0 0 0 0.11 0.66 4 0 0 4 3 4 6 3 3 28.31 15.42 84.57 0 2 1 Whitelist OV-AU 0.54 0.87 0 0 0.48 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 8 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 13 NA NA 0 0 115 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.69 NA NA NA 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 14 56674716 86112084 1 2 115 2 0 0 0 0 0.11 0.42 2 0 0 NA NA NA 4 3 4 28.31 0.23 96.06 0 1 2 Whitelist OV-AU 0.54 0.66 0 0 0.48 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 4 0.02 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 15 57050253 57060647 1 1 115 1 0 0 0 0 0.39 0.25 1 0 NA NA NA NA NA NA NA 28.31 28.91 70.96 0 2 NA Whitelist OV-AU 0.62 0.5 0 NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 16 48168213 49981731 1 1 115 0 1 0 0 0 0.39 1 2 0.42 NA NA NA NA 7 3 6 28.31 46.93 53.06 0 2 3 Whitelist OV-AU 0.62 1 0.42 NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 17 11997375 29546803 1 2 115 1 1 0 0 0 0.57 0.24 1 0.08 0 NA NA NA NA NA NA 28.31 59.14 40.86 0 1 NA Whitelist OV-AU 0.68 0.48 0.08 0 0.64 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 4 0.02 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 18 47769585 65742929 1 1 115 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 5 5 5 28.31 23.02 76.94 0 1 2 Whitelist OV-AU 0.62 0.93 NA NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 19 NA NA 0 0 115 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.74 NA NA NA 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 20 NA NA 0 0 115 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.57 NA NA NA 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 21 27497906 27594512 1 1 115 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 4 4 4 28.31 2.66 74.74 0 1 2 Whitelist OV-AU 0.62 0.17 0 NA 0.59 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 22 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-104 X 7679067 121624245 1 4 115 4 0 0 0 0 0.01 0.52 4 0 0 4 3 4 5 3 3 28.31 0.71 99.06 0 2 1 Whitelist OV-AU 0.21 0.76 0 0 0.16 0 No OV-AU AOCS-104 OV 0.44 1.87 Ovary-AdenoCA NA 8 0.03 frameshift_deletion,17_7578232_-_AAAT,CN:1 2 OV-AU DO46386 AOCS-104 female deceased C48.2 49 1162 1162 NA Included Ovary-AdenoCA OV AU 1 38.22 OV-AU::AOCS-105 1 34065251 229122654 1 22 197 4 4 0 0 14 0.05 0 16 0 0 16 6 16 18 6 6 32.85 36 63.81 0 2 3 Whitelist OV-AU 2 0.76 0.03 0 0 0.46 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 30 0.08 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 2 13539130 201725052 1 9 197 2 3 0 0 4 0.14 0.7 7 0 0 7 7 7 8 8 8 32.85 10.65 89.26 0 2 1 Whitelist OV-AU 1 0.62 0.89 0 0 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 14 0.04 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 3 48701421 172298407 1 9 197 1 1 1 0 6 0.8 0.68 7 0 0 7 3 7 11 4 4 32.85 53.29 46.71 0 3 4 Whitelist OV-AU 1 0.97 0.88 0 0 0.84 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 12 0.03 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 4 89383345 184252352 1 4 197 0 2 0 0 2 0.11 0.47 4 0 0 4 4 4 7 7 7 32.85 99.83 0.16 0 1 2 Whitelist OV-AU 6 0.54 0.72 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 5 42287247 153776476 1 8 197 2 4 0 0 2 0.06 0.46 9 0 0 9 5 9 10 6 6 32.85 49.89 47.44 0 2 1 Whitelist OV-AU 0.41 0.7 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 14 0.04 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 6 12346926 167360623 1 11 197 1 4 0 1 5 0.11 0.23 11 0 0 11 8 11 12 8 8 32.85 2.1 97.62 0 2 3 Whitelist OV-AU 4 0.34 0.46 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 17 0.04 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 7 4960360 140758080 1 8 197 3 3 0 0 2 0.11 0.27 13 0 0 13 8 13 19 8 10 32.85 15.12 84.66 0 2 1 Whitelist OV-AU 0.62 0.51 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 14 0.04 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 8 74285905 142310997 1 8 197 2 2 0 0 4 0.26 0.11 12 0 0 12 3 10 14 4 4 32.85 56.64 43.25 0 4 5 Whitelist OV-AU 6 0.62 0.28 0 0 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 12 0.03 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 9 21358890 106864941 2 6 197 0 1 1 2 2 0.57 0.01 1 0 0 NA NA NA 6 4 4 32.85 10.83 89.02 0 2 NA Whitelist OV-AU 1 0.93 0.06 0 0 0.64 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 10 97628101 97655710 1 1 197 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 7 3 3 32.85 2.01 97.85 0 2 3 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 11 49078005 134174396 2 2 197 0 0 1 1 0 0.57 0.39 3 0 0 NA NA NA 4 3 3 32.85 15.73 83.85 0 2 3 Whitelist OV-AU 0.68 0.64 0 0 0.64 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 12 41795815 98583308 2 7 197 0 0 2 2 3 0.26 0 6 0 0 6 3 6 11 3 3 32.85 44.96 55.02 0 2 3 Whitelist OV-AU 0.54 0.02 0 0 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 11 0.03 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 13 32853003 48918370 1 4 197 0 2 0 0 2 0.11 0.84 1 0 0 NA NA NA NA NA NA 32.85 0 100 0 2 NA Whitelist OV-AU 0.68 0.98 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 14 103460314 103611013 1 1 197 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 4 4 32.85 49.33 31.97 0 1 2 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 15 77229049 93636019 1 3 197 0 2 0 0 1 0.11 0.27 6 0 0 6 3 6 10 4 4 32.85 23.52 76.48 0 3 4 Whitelist OV-AU 0.41 0.51 0 0 0.48 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 5 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 16 4965866 49196305 2 4 197 0 0 1 1 2 0.57 0.26 1 0 0 NA NA NA 5 4 4 32.85 44.72 55 0 2 NA Whitelist OV-AU 0.62 0.5 0 0 0.64 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 17 NA NA 0 0 197 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.96 NA NA NA 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 18 45262319 64509069 1 2 197 1 1 0 0 0 0.57 0.38 3 0 0 NA NA NA 7 4 4 32.85 89.91 4.22 0 1 2 Whitelist OV-AU 0.68 0.63 0 0 0.64 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 19 15200368 49597675 1 4 197 1 1 0 1 1 0.8 0.06 5 0 0 5 5 5 8 6 6 32.85 43.53 56.3 0 2 1 Whitelist OV-AU 0.68 0.19 0 0 0.84 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 7 0.02 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 20 62151558 62317382 1 1 197 0 0 0 1 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 32.85 7.39 91.54 0 2 3 Whitelist OV-AU 0.62 0.95 NA NA 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 21 21936774 21950926 1 1 197 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA 6 6 6 32.85 23.72 53.63 0 1 2 Whitelist OV-AU 0.62 0.56 NA NA 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 22 NA NA 0 0 197 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-105 X 46353375 47066816 1 1 197 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA 9 5 5 32.85 0.47 99.3 0 2 3 Whitelist OV-AU 0.62 0.33 0 NA 0.59 0 No OV-AU AOCS-105 OV 0.67 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 1 OV-AU DO46388 AOCS-105 female deceased C56 74 413 413 NA Included Ovary-AdenoCA OV AU 1 13.59 OV-AU::AOCS-106 1 104515729 194007573 1 9 268 2 3 0 0 4 0.14 0.43 9 0 0 9 5 7 15 5 6 59.22 78.49 21.51 0 3 4 Whitelist OV-AU 0.41 0.68 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 2 17224025 70613575 2 2 268 0 2 0 0 0 0.11 0.51 6 0 0 6 3 4 13 5 5 59.22 43.52 56.39 0 3 4 Whitelist OV-AU 0.54 0.75 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 3 118810089 178463781 4 6 268 1 1 1 1 2 1 0.23 7 0 0 7 5 5 29 9 9 59.22 88.21 11.65 0 3 2 Whitelist OV-AU 18 0.93 0.46 0 0 1 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 4 21540124 118458681 2 3 268 1 1 0 0 1 0.57 0.27 10 0 0 10 5 10 16 7 7 59.22 43.61 56.11 0 3 2 Whitelist OV-AU 0.62 0.51 0 0 0.64 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 5 27266228 167866427 1 14 268 2 1 0 1 10 0.57 0.21 11 0 0 11 3 5 17 4 6 59.22 53.23 44.09 0 4 2 Whitelist OV-AU 8 0.68 0.43 0 0 0.64 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 6 150035172 156366672 2 2 268 1 1 0 0 0 0.57 0.7 1 0 0 NA NA NA 13 3 7 59.22 36.17 61 0 2 NA Whitelist OV-AU 0.68 0.89 0 0 0.64 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 7 123169199 155671594 2 4 268 0 0 1 1 2 0.57 0.01 1 0 0 NA NA NA 15 6 8 59.22 80.65 16.18 0 4 NA Whitelist OV-AU 0.68 0.06 0 0 0.64 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 8 22874008 144129462 1 10 268 4 0 0 0 6 0.01 0 16 0 0 16 7 14 17 7 7 59.22 83.4 12.58 0 4 3 Whitelist OV-AU 0.62 0.01 0 0 0.16 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 9 29602674 139915003 1 3 268 0 2 0 0 1 0.11 0.2 4 0 0 4 3 4 7 4 4 59.22 43.36 55.93 0 2 1 Whitelist OV-AU 0.62 0.43 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 10 31540082 80799471 1 3 268 2 1 0 0 0 0.3 1 5 0 0 5 3 5 9 5 5 59.22 99.8 0.02 0 3 2 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 11 16752214 88638642 1 6 268 3 2 0 0 1 0.14 0.31 12 0 0 12 3 10 17 3 3 59.22 63.4 36.05 0 4 2 Whitelist OV-AU 0.54 0.56 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 12 46384695 121025169 1 12 268 3 2 1 0 6 0.34 0.08 18 0 0 18 7 18 19 7 7 59.22 99.87 0.05 0 3 4 Whitelist OV-AU 0.68 0.23 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 13 37587937 81839014 1 4 268 1 2 0 0 1 0.3 0.5 7 0 0 7 3 3 11 3 4 59.22 51.96 47.91 0 4 2 Whitelist OV-AU 0.68 0.75 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 14 24612931 91050646 1 5 268 1 1 1 1 1 1 0.6 11 0 0 11 6 11 13 6 6 59.22 98.97 0.11 0 3 2 Whitelist OV-AU 0.93 0.81 0 0 1 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 15 34456495 34476337 1 1 268 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA 4 4 4 59.22 29.11 70.89 0 2 NA Whitelist OV-AU 0.62 0.32 NA NA 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 16 24638114 88119166 1 7 268 2 0 0 0 5 0.11 0 5 0 0 5 3 5 9 7 7 59.22 80.13 19.78 0 2 1 Whitelist OV-AU 0.77 0 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 17 28417579 46137270 1 4 268 0 2 0 0 2 0.11 0.18 3 0 0 NA NA NA 5 4 5 59.22 59.87 40.13 0 3 2 Whitelist OV-AU 0.54 0.4 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 18 9811402 62781478 1 5 268 0 2 0 0 3 0.11 0.7 8 0 0 8 4 6 11 5 5 59.22 58.47 36.89 0 3 4 Whitelist OV-AU 3 0.62 0.9 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 19 20442103 49548650 1 4 268 2 1 0 0 1 0.3 0.12 5 0 0 5 4 5 8 4 7 59.22 37.39 55.33 0 3 4 Whitelist OV-AU 0.54 0.3 0 0 0.59 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 20 31131561 31951551 4 4 268 1 3 0 0 0 0.11 0 5 0 0 5 4 5 21 5 5 59.22 98.81 0.15 0 4 5 Whitelist OV-AU 0.54 0 0 0 0.48 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 21 NA NA 0 0 268 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.8 NA NA NA 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 22 NA NA 0 0 268 0 0 0 0 0 NA 0.57 NA 0 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.79 0 NA NA 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-106 X 57740815 145145599 1 5 268 3 0 0 0 2 0.03 0.09 6 0 0 6 6 6 8 8 8 59.22 6.78 89.62 0 1 2 Whitelist OV-AU 0.45 0.25 0 0 0.33 0 No OV-AU AOCS-106 OV 0.88 2.82 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 OV-AU DO46390 AOCS-106 female deceased C56 65 374 374 NA Included Ovary-AdenoCA OV AU 1 12.3 OV-AU::AOCS-107 1 15558170 242829831 1 17 249 7 9 0 0 1 0 0.56 35 0 0 35 5 7 36 5 7 74.25 81.13 18.87 0 4 2 Whitelist OV-AU 0.14 0.78 0 0 0.05 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 33 0.07 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 2 465246 214524103 1 15 249 2 7 0 1 5 0.01 0.73 22 0 0 22 5 6 23 5 7 74.25 87.07 12.82 0 4 3 Whitelist OV-AU 0.54 0.91 0 0 0.19 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 25 0.05 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 3 71580473 179949176 1 12 249 1 7 0 0 4 0 0.8 19 0 0 19 6 12 20 7 7 74.25 99.81 0.07 0 4 6 Whitelist OV-AU 11 0.25 0.95 0 0 0.04 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 20 0.04 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 4 10392449 186065040 1 12 249 2 3 2 1 4 0.8 0.53 14 0 0 14 3 8 16 3 5 74.25 87.14 12.75 0 5 2 Whitelist OV-AU 3 0.68 0.76 0 0 0.84 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 20 0.04 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 5 44544223 175298257 1 5 249 3 1 0 0 1 0.11 0.19 9 0 0 9 3 6 11 4 4 74.25 87.65 12.23 0 2 4 Whitelist OV-AU 0.45 0.41 0 0 0.48 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 9 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 6 14299766 153157627 2 3 249 0 0 1 1 1 0.57 0 3 0.01 0 NA NA NA 4 3 3 74.25 42.16 57.59 0 2 4 Whitelist OV-AU 0.62 0.02 0.01 0 0.64 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 5 0.01 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 7 35531951 70252502 1 6 249 0 2 1 2 1 0.53 0.26 9 0 0 9 6 7 14 6 8 74.25 58.22 41.56 0 4 2 Whitelist OV-AU 0.68 0.5 0 0 0.64 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 11 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 8 6327882 140702812 2 12 249 1 1 1 1 8 1 0 27 0 0 27 4 9 28 4 9 74.25 68.69 31.02 0 2 8 Whitelist OV-AU 0.83 0.02 0 0 1 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 16 0.03 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 9 12885958 136191407 1 13 249 2 7 1 0 3 0.01 0.1 15 0 0 15 3 7 17 4 9 74.25 99.3 0 0 3 4 Whitelist OV-AU 0.54 0.26 0 0 0.19 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 23 0.05 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 10 69314387 100054666 1 6 249 3 1 0 0 2 0.11 1 8 0 0 8 4 7 10 4 8 74.25 81.65 18.18 0 4 2 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 11 12061424 126334500 1 10 249 0 6 0 0 4 0 0.65 8 0 0 8 7 8 10 7 9 74.25 99.57 0 0 4 6 Whitelist OV-AU 3 0.54 0.86 0 0 0.03 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 16 0.03 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 12 2206121 26565759 1 5 249 0 3 0 0 2 0.03 0.18 9 0 0 9 4 6 15 4 9 74.25 99.92 0 0 3 4 Whitelist OV-AU 0.45 0.39 0 0 0.33 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 8 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 13 25742932 95751892 1 8 249 0 4 0 0 4 0.01 0.03 13 0 0 13 6 6 16 6 6 74.25 100 0 0 4 3 Whitelist OV-AU 0.54 0.12 0 0 0.16 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 12 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 14 47606875 100840235 1 2 249 0 2 0 0 0 0.11 0.46 4 0 0 4 4 4 6 4 5 74.25 99.04 0.96 0 3 5 Whitelist OV-AU 0.54 0.71 0 0 0.48 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 4 0.01 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 15 33564293 72770595 1 6 249 0 3 0 0 3 0.03 0.85 4 0 0 4 3 4 5 3 4 74.25 45.16 54.84 0 2 3 Whitelist OV-AU 11 0.62 0.98 0 0 0.33 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 9 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 16 12543620 70532183 1 5 249 1 3 0 0 1 0.11 1 8 0 0 8 5 7 10 5 5 74.25 95.4 4.51 0 3 4 Whitelist OV-AU 0.62 1 0 0 0.48 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 9 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 17 42080054 42093883 1 1 249 0 1 0 0 0 0.39 0.69 1 0.04 NA NA NA NA 6 0 6 74.25 85.2 14.76 0 3 NA Whitelist OV-AU 0.62 0.89 0.04 NA 0.59 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 2 0 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 18 316795 41066402 34 36 249 7 10 8 9 2 0.9 0 51 0 0 51 3 4 53 3 5 74.25 41.86 53.5 1 8 5 Whitelist OV-AU 0.93 0 0 0 0.92 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 70 0.14 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 19 13674670 45305509 1 8 249 1 2 0 0 5 0.3 0.01 4 0 0 4 3 4 7 4 6 74.25 87.01 12.82 0 4 5 Whitelist OV-AU 13_7 0.62 0.05 0 0 0.59 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 11 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 20 805051 46776037 1 4 249 1 0 1 0 2 0.57 0.12 5 0 0 5 3 4 6 3 3 74.25 98.97 0 0 5 4 Whitelist OV-AU 0.68 0.31 0 0 0.64 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 21 NA NA 0 0 249 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 0 0 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 22 NA NA 0 0 249 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.63 NA NA NA 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 0 0 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-107 X 32631859 128557800 1 6 249 2 4 0 0 0 0.06 0.38 7 0 0 7 3 7 7 3 7 74.25 0.86 98.91 0 2 4 Whitelist OV-AU 0.54 0.63 0 0 0.48 0 No OV-AU AOCS-107 OV 0.85 3.57 Ovary-AdenoCA NA 12 0.02 stopgain,17_7577067_A_T,CN:2 4 OV-AU DO46392 AOCS-107 female deceased C56 48 628 628 NA Included Ovary-AdenoCA OV AU 1 20.66 OV-AU::AOCS-108 1 85351126 85451136 5 5 415 1 2 1 1 0 0.9 0 5 0 0 5 3 5 57 6 7 76.12 96.94 0 0 4 5 Whitelist OV-AU 0.93 0.01 0 0 0.92 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 10 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 2 148738027 159293210 2 5 415 0 1 0 1 3 0.57 0.02 16 0 0 16 4 7 67 14 14 76.12 99.55 0.33 0 8 20 Whitelist OV-AU 0.68 0.07 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 7 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 3 7603269 193289152 20 27 415 7 6 3 4 7 0.57 0 77 0 0 77 7 27 79 7 11 76.12 78.17 18.64 0 4 3 Whitelist OV-AU 0.62 0 0 0 0.64 0 High confidence OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA With other complex events 47 0.06 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 4 109603344 137639069 2 3 415 0 0 1 1 1 0.57 0.09 2 0 0 NA NA NA 11 4 4 76.12 99.66 0.14 0 3 4 Whitelist OV-AU 0.87 0.26 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 5 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 5 27969856 175098041 1 6 415 3 2 0 0 1 0.14 0 11 0 0 11 5 10 13 5 5 76.12 95.36 4.52 0 3 4 Whitelist OV-AU 0.54 0.02 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 11 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 6 30806438 30892186 3 3 415 1 2 0 0 0 0.3 0.02 6 0 0 6 0 4 43 7 8 76.12 96.95 0.03 0 6 7 Whitelist OV-AU 0.62 0.07 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 6 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 7 4167086 148638798 1 22 415 6 5 0 2 9 0.07 0.51 29 0 0 29 4 6 32 4 6 76.12 85.51 11.94 0 5 4 Whitelist OV-AU 8 0.62 0.76 0 0 0.48 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 35 0.04 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 8 36857660 141396458 3 22 415 1 0 1 1 19 0.8 0 58 0 0 58 7 18 69 7 8 76.12 84.68 15.22 1 5 4 Whitelist OV-AU 14 0.62 0 0 0 0.84 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 25 0.03 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 False positive; manually removed OV-AU::AOCS-108 9 22135649 102542170 1 8 415 2 3 0 0 3 0.14 0.45 8 0 0 8 3 4 18 3 4 76.12 93.2 6.1 0 5 4 Whitelist OV-AU 0.41 0.69 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 13 0.02 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 10 45163253 116133269 1 12 415 2 6 0 0 4 0.01 0 20 0 0 20 8 20 39 11 11 76.12 99.81 0 0 4 5 Whitelist OV-AU 0.54 0.02 0 0 0.16 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 20 0.02 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 11 43557686 55885649 3 3 415 1 2 0 0 0 0.3 0.82 9 0 0 9 8 9 24 11 11 76.12 85.24 11.13 0 4 5 Whitelist OV-AU 0.62 0.96 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 6 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 12 485386 122699365 1 18 415 1 4 1 1 11 0.28 0.29 16 0 0 16 4 14 16 4 4 76.12 52.42 47.5 0 4 2 Whitelist OV-AU 8 0.62 0.54 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 25 0.03 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 13 24581407 59232987 1 5 415 1 1 0 0 3 0.57 0.1 5 0 0 5 3 5 9 4 4 76.12 66.41 33.59 0 2 1 Whitelist OV-AU 0.93 0.27 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 7 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 14 35017318 97009526 1 9 415 1 1 2 0 5 0.57 1 6 0 0 6 5 6 8 5 5 76.12 22.75 76.34 1 2 3 Whitelist OV-AU 8 0.62 1 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 13 0.02 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 15 49522643 92860017 1 7 415 2 3 0 0 2 0.14 0.55 12 0 0 12 4 8 14 4 6 76.12 33.51 66.36 0 2 3 Whitelist OV-AU 0.62 0.78 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 12 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 16 8823764 78900793 1 4 415 2 2 0 0 0 0.26 0.17 10 0 0 10 9 10 11 9 9 76.12 92.56 2.92 0 3 2 Whitelist OV-AU 0.62 0.38 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 8 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 17 26884009 35084797 1 2 415 1 1 0 0 0 0.57 0.45 4 0 0 4 4 4 11 8 8 76.12 76.82 23.17 0 3 4 Whitelist OV-AU 0.68 0.69 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 4 0 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 18 12228473 73731376 1 6 415 1 0 0 1 4 0.57 0.88 12 0 0 12 5 9 15 6 6 76.12 64.57 30.79 0 4 3 Whitelist OV-AU 10 0.68 1 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 8 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 19 6690297 15357450 1 4 415 0 3 0 0 1 0.03 0.48 3 0 0 NA NA NA 7 7 7 76.12 59.92 39.91 0 3 2 Whitelist OV-AU 0.54 0.72 0 0 0.33 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 7 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 20 6307870 62825573 1 6 415 2 3 0 0 1 0.14 0.61 13 0 0 13 5 8 14 5 8 76.12 93.54 0 0 4 5 Whitelist OV-AU 0.54 0.83 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 11 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 21 33031946 38977693 1 2 415 1 1 0 0 0 0.57 0.65 4 0 0 4 3 4 10 5 5 76.12 70.06 7.77 0 3 2 Whitelist OV-AU 0.68 0.86 0 0 0.64 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 4 0 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 22 30085555 40864528 1 4 415 2 1 0 0 1 0.3 0.82 5 0 0 5 5 5 6 5 6 76.12 94.77 5.23 0 3 2 Whitelist OV-AU 0.68 0.96 0 0 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 7 0.01 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-108 X 136543288 136574132 1 1 415 0 1 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 76.12 0 100 0 2 NA Whitelist OV-AU 0.62 0 0 NA 0.59 0 No OV-AU AOCS-108 OV 0.7 3.64 Ovary-AdenoCA NA 2 0 NA 3 OV-AU DO46394 AOCS-108 female deceased C56 61 1039 1039 NA Included Ovary-AdenoCA OV AU 1 34.18 OV-AU::AOCS-111 1 16235673 98374965 1 4 106 2 2 0 0 0 0.26 0.59 5 0 0 5 5 5 8 8 8 59.44 100 0 0 3 4 Whitelist OV-AU 0.62 0.81 0 0 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 2 140703109 197036168 1 2 106 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 6 4 4 59.44 99.87 0.02 0 5 2 Whitelist OV-AU 0.68 0.06 NA 0 0.64 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 3 49431701 117097857 1 5 106 0 3 0 0 2 0.03 0.45 5 0 0 5 3 5 6 3 3 59.44 52.49 44.36 0 5 1 Whitelist OV-AU 19 0.62 0.69 0 0 0.33 1 Linked to low confidence OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA With other complex events 8 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 4 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 5 25328537 162034796 1 3 106 2 1 0 0 0 0.3 0.22 4 0.01 0 4 3 4 4 3 3 59.44 99.85 0.01 0 3 2 Whitelist OV-AU 0.62 0.46 0.01 0 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 6 1584347 1608208 1 1 106 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 59.44 99.77 0 0 3 NA Whitelist OV-AU 0.62 0.09 NA NA 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 7 66211501 71056341 1 3 106 1 1 0 0 1 0.57 0.38 4 NA 0 4 3 4 4 3 3 59.44 99.34 0.43 0 3 2 Whitelist OV-AU 0.62 0.63 NA 0 0.64 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 8 17336022 21945227 1 1 106 0 1 0 0 0 0.39 0.18 3 NA 0 NA NA NA 6 3 3 59.44 96.58 0 1 3 4 Whitelist OV-AU 0.62 0.4 NA 0 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 9 10713108 17534631 1 2 106 2 0 0 0 0 0.11 0.45 5 NA 0 5 3 5 10 4 4 59.44 48.35 50.98 0 5 4 Whitelist OV-AU 0.54 0.69 NA 0 0.48 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 10 31719964 33667769 3 3 106 1 1 0 1 0 0.8 0 4 0 0 4 3 4 14 5 5 59.44 52.82 43.83 1 6 5 Whitelist OV-AU 0.87 0.01 0 0 0.84 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 11 49322398 50776772 2 2 106 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 8 3 3 59.44 0.23 99.34 0 2 1 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 12 111411719 111440979 1 1 106 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA 4 4 4 59.44 96.26 0 0 4 NA Whitelist OV-AU 0.62 0.2 NA NA 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 13 108975135 109003506 1 1 106 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 59.44 85.85 0 0 3 4 Whitelist OV-AU 0.62 0.52 NA NA 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 14 76774492 76789946 1 1 106 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 59.44 84.09 0 0 3 NA Whitelist OV-AU 0.62 0.51 NA NA 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 15 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 16 1045626 19850884 1 2 106 1 1 0 0 0 0.57 1 4 NA 0.04 4 3 4 6 4 4 59.44 36.96 57.85 0 3 2 Whitelist OV-AU 0.68 1 NA 0.04 0.64 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 17 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 18 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 19 28894477 56155202 36 39 106 9 13 6 8 3 0.41 0 54 0 0 54 5 10 66 7 10 59.44 60.79 31.94 1 8 7 Whitelist OV-AU 21 0.62 0 0 0 0.61 1 Low confidence OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA With other complex events 75 0.35 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 20 31211322 61537387 1 3 106 0 1 1 1 0 0.8 0.5 1 0 0 NA NA NA NA NA NA 59.44 99.02 0 0 4 NA Whitelist OV-AU 0.87 0.74 0 0 0.84 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 21 17237944 40394460 6 9 106 2 2 1 1 3 0.88 0 16 0 0 16 11 16 20 11 11 59.44 52.57 24.78 0 3 4 Whitelist OV-AU 19 0.62 0 0 0 0.91 1 High confidence OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA After polyploidization 15 0.07 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 22 24139832 24154281 1 1 106 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 59.44 0.03 76.19 0 1 2 Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-111 X NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-111 OV 0.62 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:2 3 OV-AU DO46398 AOCS-111 female alive C56 66 437 437 NA Included Ovary-AdenoCA OV AU 1 14.38 OV-AU::AOCS-112 1 205136558 205319465 2 2 297 0 2 0 0 0 0.11 0.02 3 0 0 NA NA NA 57 5 6 72.9 96.96 0 0 4 8 Whitelist OV-AU 0.54 0.07 0 0 0.48 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 2 42545204 229306643 2 5 297 0 2 1 1 1 0.57 0.17 25 0 0 25 19 21 28 19 21 72.9 97.29 0 0 4 5 Whitelist OV-AU 0.93 0.39 0 0 0.64 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 9 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 3 7297201 177354012 2 10 297 0 2 1 1 6 0.57 0.02 35 0 0 35 7 10 38 7 11 72.9 91.56 5.4 1 3 4 Whitelist OV-AU 19 0.86 0.07 0 0 0.64 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 14 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 4 3403235 4519376 2 4 297 0 0 2 2 0 0.26 0.08 6 0 0 6 5 6 19 5 5 72.9 1.04 98.94 0 2 1 Whitelist OV-AU 0.62 0.23 0 0 0.59 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 8 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 5 38819020 162947319 1 11 297 7 3 0 0 1 0 0.23 18 0 0 18 4 11 20 6 13 72.9 97.32 0 0 4 5 Whitelist OV-AU 0.34 0.46 0 0 0.14 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 21 0.04 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 6 18466155 111996232 1 9 297 3 6 0 0 0 0.01 0.11 21 0 0 21 7 8 25 8 8 72.9 64.49 32.67 0 5 2 Whitelist OV-AU 0.28 0.29 0 0 0.21 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 18 0.03 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 7 1525898 152136709 1 23 297 5 10 1 1 6 0 0.01 46 0 0 46 6 8 49 6 8 72.9 97.42 0 2 6 5 Whitelist OV-AU 0.54 0.06 0 0 0.16 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 40 0.07 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 8 36909081 43399767 2 5 297 0 1 1 2 1 0.57 0.29 4 0 0 4 0 4 19 5 5 72.9 96.38 0.08 0 3 4 Whitelist OV-AU 0.93 0.54 0 0 0.64 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 9 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 9 668642 139889249 1 10 297 1 7 0 0 2 0 0.76 15 0 0 15 7 15 16 7 7 72.9 34.01 63.43 0 2 3 Whitelist OV-AU 0.3 0.93 0 0 0.04 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 18 0.03 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 10 125097364 126834415 3 3 297 0 2 0 1 0 0.3 0.33 3 0 0 NA NA NA 20 7 7 72.9 95 1.65 0 3 4 Whitelist OV-AU 0.62 0.58 0 0 0.59 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 11 12858035 14406842 2 2 297 0 2 0 0 0 0.11 0.27 4 0 0 4 3 4 22 8 8 72.9 65.72 30.78 0 3 2 Whitelist OV-AU 0.54 0.51 0 0 0.48 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 12 6016071 129897086 1 16 297 5 10 0 0 1 0 0.17 33 0 0 33 8 8 35 8 8 72.9 90.28 6.04 0 3 4 Whitelist OV-AU 0.1 0.38 0 0 0.03 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 31 0.05 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 13 34657331 113993376 1 5 297 1 4 0 0 0 0.04 0.42 8 0 0 8 5 8 10 5 5 72.9 97.22 0 0 4 3 Whitelist OV-AU 0.45 0.67 0 0 0.36 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 10 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 14 77609777 106590539 1 8 297 1 5 0 0 2 0.01 0.51 9 0 0 9 3 9 14 5 6 72.9 96.5 0 0 4 3 Whitelist OV-AU 20 0.54 0.75 0 0 0.19 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 14 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 15 87737463 87759057 1 1 297 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 72.9 0.02 95.11 0 1 2 Whitelist OV-AU 0.62 0.02 NA NA 0.59 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 16 5181405 5291134 3 3 297 1 2 0 0 0 0.3 0.15 4 0 0 4 4 4 19 7 10 72.9 51.62 48.34 0 3 4 Whitelist OV-AU 0.62 0.35 0 0 0.59 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 6 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 17 27229123 46172264 1 4 297 0 4 0 0 0 0.01 0.37 7 0 0 7 3 6 8 3 4 72.9 91 8.98 0 3 2 Whitelist OV-AU 0.21 0.62 0 0 0.16 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 8 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 18 9221824 64137805 1 4 297 1 1 1 0 1 0.8 0.2 5 0 0 5 3 5 7 5 5 72.9 99.96 0 0 4 3 Whitelist OV-AU 1 0.43 0 0 0.84 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 7 0.01 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 19 3407650 38742808 3 13 297 2 2 2 0 7 0.57 0 29 0 0 29 6 6 38 6 8 72.9 65.04 27.68 0 3 4 Whitelist OV-AU 3 0.9 0 0 0 0.64 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 19 0.03 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 20 3554101 50796187 1 9 297 1 6 0 0 2 0 0.04 11 0 0 11 5 5 13 5 5 72.9 99.03 0 0 6 7 Whitelist OV-AU 0.48 0.14 0 0 0.09 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 16 0.03 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 21 32771313 32864453 1 1 297 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 72.9 70.69 0 0 3 NA Whitelist OV-AU 0.62 0.52 NA NA 0.59 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 2 0 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 22 29629715 46463921 1 7 297 0 7 0 0 0 0 0.09 15 0 0 15 13 15 15 13 15 72.9 100 0 0 3 4 Whitelist OV-AU 0.02 0.26 0 0 0.01 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 14 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-112 X 48685115 139614883 1 7 297 1 1 1 3 1 0.57 0.14 11 0 0 11 5 11 12 5 5 72.9 36.19 59.97 0 2 1 Whitelist OV-AU 0.77 0.34 0 0 0.64 0 No OV-AU AOCS-112 OV 0.69 3.93 Ovary-AdenoCA NA 13 0.02 frameshift_deletion,17_7579401_-_A,CN:3 3 OV-AU DO46400 AOCS-112 female deceased C48.2 70 719 719 NA Included Ovary-AdenoCA OV AU 1 23.65 OV-AU::AOCS-113 1 208032015 248380796 36 41 163 14 6 9 7 5 0.24 0 41 0 0 41 9 24 67 9 9 87.73 99.65 0 0 8 7 Whitelist OV-AU 0.68 0 0 0 0.59 1 High confidence OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA With other complex events 77 0.24 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 2 124859821 125948846 2 2 163 1 1 0 0 0 0.57 0.89 3 0 0 NA NA NA 24 8 9 87.73 97.03 0 0 4 6 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 3 96331123 116407940 1 4 163 3 1 0 0 0 0.11 0.02 6 0 0 6 6 6 7 7 7 87.73 99.87 0 0 5 6 Whitelist OV-AU 0.54 0.08 0 0 0.48 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 4 106862425 186366209 1 3 163 3 0 0 0 0 0.03 0.03 6 0 0 6 6 6 8 8 8 87.73 74.8 25.09 0 2 3 Whitelist OV-AU 0.41 0.1 0 0 0.33 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 5 162027151 170500056 1 2 163 1 1 0 0 0 0.57 0.63 4 0 0 4 3 4 5 3 3 87.73 99.88 0 0 4 3 Whitelist OV-AU 0.68 0.84 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 6 105090252 105918921 2 2 163 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 28 6 6 87.73 99.85 0 0 4 5 Whitelist OV-AU 0.68 0.05 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 7 24074616 104144058 1 3 163 3 0 0 0 0 0.03 0.23 6 0 0 6 6 6 8 8 8 87.73 99.78 0 0 5 6 Whitelist OV-AU 0.41 0.46 0 0 0.33 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 8 34975454 125831025 1 2 163 2 0 0 0 0 0.11 0.15 4 0 0 4 4 4 10 7 10 87.73 96.58 0 0 4 5 Whitelist OV-AU 0.54 0.35 0 0 0.48 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 9 21876678 100859768 1 2 163 1 1 0 0 0 0.57 0.69 1 0 0 NA NA NA 4 4 4 87.73 99.18 0.12 0 3 NA Whitelist OV-AU 0.68 0.89 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 10 55733819 128964248 1 2 163 2 0 0 0 0 0.11 0.71 4 0 0 4 3 4 11 5 5 87.73 96.56 0 0 6 5 Whitelist OV-AU 0.54 0.9 0 0 0.48 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 11 45860934 47322760 2 2 163 1 0 1 0 0 0.57 0.13 4 0 0 4 4 4 18 8 8 87.73 69.34 26.77 0 3 4 Whitelist OV-AU 0.68 0.32 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 12 NA NA 0 0 163 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.13 NA NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 13 NA NA 0 0 163 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist OV-AU NA 0.16 NA NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 14 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 15 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 16 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 17 29156612 29273028 1 1 163 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 87.73 99.98 0 0 3 NA Whitelist OV-AU 0.62 0.34 NA NA 0.59 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 18 NA NA 0 0 163 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.7 0 NA NA 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 19 13113121 50344650 2 5 163 0 2 0 0 3 0.11 0 11 0 0 11 6 10 14 6 6 87.73 99.22 0 3 4 5 Whitelist OV-AU 0.62 0 0 0 0.48 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 20 18101078 18111712 1 1 163 0 0 1 0 0 0.39 0.41 1 0 NA NA NA NA 6 3 4 87.73 92.71 0 0 4 NA Whitelist OV-AU 0.62 0.65 0 NA 0.59 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 21 28022867 28103535 1 2 163 0 0 0 1 1 0.39 0.14 1 NA NA NA NA NA NA NA NA 87.73 77.35 0 0 4 NA Whitelist OV-AU 0.68 0.34 NA NA 0.59 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 22 31619421 38556012 1 6 163 0 0 1 1 4 0.57 0 9 0 0 9 4 4 14 5 5 87.73 59.51 40.49 0 4 2 Whitelist OV-AU 19 0.68 0.01 0 0 0.64 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-113 X 43624532 92836267 1 2 163 2 0 0 0 0 0.11 0.37 4 0 0 4 3 4 7 4 4 87.73 64.66 35.34 0 2 1 Whitelist OV-AU 0.54 0.62 0 0 0.48 1 No OV-AU AOCS-113 OV 0.72 4.33 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:3 4 OV-AU DO46402 AOCS-113 female deceased C56 77 511 511 NA Included Ovary-AdenoCA OV AU 1 16.81 OV-AU::AOCS-115 1 28426434 202056799 1 4 104 2 2 0 0 0 0.26 0.15 9 0 0 9 7 9 9 7 7 37.38 0.3 99.69 0 2 1 Whitelist OV-AU 0.62 0.34 0 0 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 2 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 3 81504076 81529655 2 2 104 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 9 5 5 37.38 41.33 58.5 0 2 NA Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 4 46791945 99837139 1 2 104 0 2 0 0 0 0.11 0.33 4 0 0 4 4 4 5 5 5 37.38 99.77 0.21 0 1 2 Whitelist OV-AU 0.54 0.58 0 0 0.48 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 5 21964404 163375135 1 8 104 1 3 0 0 4 0.11 0.54 8 0 0 8 5 8 9 5 5 37.38 0.2 99.67 0 2 3 Whitelist OV-AU 0.62 0.77 0 0 0.48 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 6 108719279 120778388 1 2 104 0 2 0 0 0 0.11 0.53 2 0 0 NA NA NA 5 3 3 37.38 19.16 80.7 0 2 3 Whitelist OV-AU 0.54 0.76 0 0 0.48 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 7 4945916 5543958 1 1 104 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 6 4 4 37.38 18.32 81.61 0 0 1 Whitelist OV-AU 0.62 0.87 NA NA 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 8 129498991 129709043 5 7 104 0 4 1 0 2 0.04 0 5 0 0 5 3 5 15 8 8 37.38 30.44 69.44 0 5 3 Whitelist OV-AU 5 0.47 0 0 0 0.36 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 9 5572849 131938833 1 11 104 1 2 0 0 8 0.3 0 8 0 0 8 6 7 11 6 9 37.38 12.09 87.79 0 2 3 Whitelist OV-AU 0.87 0 0 0 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 14 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 10 81352455 90086391 1 2 104 1 1 0 0 0 0.57 0.34 3 0 0 NA NA NA 8 3 3 37.38 60.01 39.87 0 1 0 Whitelist OV-AU 0.68 0.59 0 0 0.64 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 11 73075864 121115814 3 3 104 1 0 1 1 0 0.8 0.15 3 0 0 NA NA NA 12 5 5 37.38 51.42 48.16 0 2 1 Whitelist OV-AU 0.87 0.36 0 0 0.84 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 12 53783908 70461781 1 3 104 2 1 0 0 0 0.3 0.49 4 0 0 4 3 4 6 3 3 37.38 9.45 90.47 0 2 1 Whitelist OV-AU 0.62 0.74 0 0 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 13 86653375 86937217 1 1 104 0 0 0 1 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 37.38 100 0 0 1 NA Whitelist OV-AU 0.62 0.81 NA NA 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 14 74620203 75335310 1 3 104 0 1 0 0 2 0.39 0.57 2 NA 0 NA NA NA 4 3 4 37.38 0.67 95.63 0 2 3 Whitelist OV-AU 0.87 0.8 NA 0 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 15 NA NA 0 0 104 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 16 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 17 29437622 29925436 1 1 104 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 37.38 50 49.98 0 1 NA Whitelist OV-AU 0.62 0 0 NA 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 18 NA NA 0 0 104 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.92 NA NA NA 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 19 32541004 34232326 2 2 104 1 1 0 0 0 0.57 0 6 0 0 6 4 4 21 5 5 37.38 34.99 64.84 1 20 36 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 20 17231419 18316039 1 1 104 0 1 0 0 0 0.39 0.29 2 0.09 NA NA NA NA 4 4 4 37.38 5.09 93.94 0 2 3 Whitelist OV-AU 0.62 0.54 0.1 NA 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 21 38699984 43361795 1 2 104 1 1 0 0 0 0.57 0.36 4 NA 0 4 3 4 5 3 3 37.38 76.99 0.36 0 1 0 Whitelist OV-AU 0.68 0.62 NA 0 0.64 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 22 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-115 X 78879647 78891405 1 1 104 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 37.38 99.76 0.01 0 1 2 Whitelist OV-AU 0.62 0.2 NA NA 0.59 0 No OV-AU AOCS-115 OV 0.9 1.71 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 OV-AU DO46408 AOCS-115 female deceased C56 56 489 489 NA Included Ovary-AdenoCA OV AU 1 16.09 OV-AU::AOCS-116 1 1036402 37021679 4 4 481 0 1 2 1 0 0.57 0.93 9 0 0 9 9 9 54 9 9 54.93 36 64 0 2 3 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 2 70382182 70574780 3 3 481 0 1 1 1 0 0.8 0.03 1 0 0 NA NA NA 35 13 13 54.93 37.71 59.6 0 3 NA Whitelist OV-AU 0.87 0.1 0 0 0.84 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 3 137813498 197700924 21 24 481 5 6 5 5 3 0.99 0 42 0 0 42 7 10 73 11 11 54.93 37.99 61.81 0 5 4 Whitelist OV-AU 0.97 0 0 0 1 0 High confidence OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA With other complex events 45 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 4 13002227 13301361 2 2 481 2 0 0 0 0 0.11 0.78 4 0 0 4 3 4 40 6 6 54.93 99.45 0.45 0 2 1 Whitelist OV-AU 0.54 0.94 0 0 0.48 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 5 6523540 170861278 1 18 481 6 10 0 0 2 0 0.51 34 0 0 34 12 26 38 12 12 54.93 92.01 7.85 2 3 4 Whitelist OV-AU 0.18 0.75 0 0 0.03 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 34 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 6 30259747 31915897 2 7 481 0 2 0 0 5 0.11 0.29 5 0 0 5 0 3 30 9 9 54.93 68.27 31.59 0 2 4 Whitelist OV-AU 14 0.77 0.54 0 0 0.48 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 7 12550018 146579965 1 16 481 8 6 0 0 2 0 0.27 28 0 0 28 5 13 31 5 5 54.93 2.45 97.33 3 2 1 Whitelist OV-AU 10 0.07 0.51 0 0 0.08 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 30 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 8 120799542 121389397 6 6 481 1 3 1 1 0 0.57 1 9 0 0 9 4 7 34 13 14 54.93 63.83 31.68 0 5 3 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 9 35748927 140007124 3 3 481 0 1 1 1 0 0.8 0.72 23 0 0 23 7 19 32 9 9 54.93 2.15 97.18 0 2 3 Whitelist OV-AU 0.87 0.9 0 0 0.84 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 10 2569603 124430589 1 28 481 3 7 1 0 17 0.02 0.13 32 0 0 32 12 20 32 12 12 54.93 82.03 17.79 0 3 2 Whitelist OV-AU 7 0.62 0.32 0 0 0.27 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 39 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 11 36110794 108039913 6 14 481 1 1 2 2 8 0.88 0 27 0 0 27 7 24 43 7 7 54.93 65.66 33.92 0 3 2 Whitelist OV-AU 14 0.98 0 0 0 0.91 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 False positive; manually removed OV-AU::AOCS-116 12 46530486 100332400 2 7 481 2 1 0 1 3 0.57 0.08 25 0 0 25 7 13 35 7 11 54.93 84.76 15.16 0 3 4 Whitelist OV-AU 0.62 0.23 0 0 0.64 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 13 44410437 109885491 1 8 481 2 3 0 0 3 0.14 0.03 13 0 0 13 9 13 14 9 9 54.93 31.99 68.01 0 2 1 Whitelist OV-AU 12 0.54 0.12 0 0 0.59 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 14 21900603 102078688 1 18 481 5 5 0 0 8 0.02 0.19 19 0 0 19 9 9 21 11 11 54.93 99.05 0.04 0 3 4 Whitelist OV-AU 11 0.62 0.41 0 0 0.33 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 28 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 15 44836660 45238778 2 3 481 2 0 0 0 1 0.11 0.89 5 0 0 5 3 5 11 4 4 54.93 66.9 33.1 0 1 2 Whitelist OV-AU 0.62 1 0 0 0.48 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 16 78666052 78900337 2 2 481 2 0 0 0 0 0.11 1 4 0 0 4 3 4 20 11 11 54.93 7.98 91.67 0 1 0 Whitelist OV-AU 0.54 1 0 0 0.48 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 17 37693631 60002319 2 9 481 0 2 1 1 5 0.57 0 16 0 0 16 5 7 36 5 5 54.93 74.01 20.43 0 4 3 Whitelist OV-AU 11 0.68 0.02 0 0 0.64 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 18 46096456 68487270 1 4 481 1 0 1 1 1 0.8 0.01 7 0 0 7 7 7 10 8 8 54.93 40.28 54.95 0 1 2 Whitelist OV-AU 1 0.03 0 0 0.84 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 19 45904293 46007375 2 2 481 0 0 1 1 0 0.57 0 4 0 0 4 0 3 26 6 6 54.93 40.96 51.77 0 2 3 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 20 14503888 14992985 3 3 481 3 0 0 0 0 0.03 0 4 0 0 4 0 3 26 5 5 54.93 99.49 0.14 0 4 2 Whitelist OV-AU 0.41 0 0 0 0.33 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 21 26076438 43238937 1 10 481 0 4 0 0 6 0.01 0.06 10 0 0 10 5 9 12 5 5 54.93 64.21 13.15 0 3 5 Whitelist OV-AU 0.54 0.18 0 0 0.16 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 22 36961521 50516706 1 4 481 1 2 0 0 1 0.3 0.67 5 0 0 5 4 5 5 4 4 54.93 7.66 90.8 0 3 4 Whitelist OV-AU 0.68 0.87 0 0 0.59 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-116 X 4368055 134339797 1 15 481 5 3 0 4 3 0.2 0.35 31 0 0 31 7 15 33 7 7 54.93 94.87 1.75 0 1 2 Whitelist OV-AU 0.73 0.6 0 0 0.59 0 No OV-AU AOCS-116 OV 0.67 2.63 Ovary-AdenoCA NA 27 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:4 3 OV-AU DO46412 AOCS-116 female deceased C56 64 597 597 NA Included Ovary-AdenoCA OV AU 1 19.64 OV-AU::AOCS-117 1 32976096 152065818 2 9 333 0 2 1 1 5 0.57 0.26 14 0 0 14 7 10 22 7 10 75.84 99.99 0 0 4 5 Whitelist OV-AU 0.97 0.5 0 0 0.64 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 13 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 2 22291212 238932056 1 23 333 4 12 0 2 5 0 0.77 36 0 0 36 6 12 39 6 9 75.84 78.59 18.71 1 3 2 Whitelist OV-AU 8 0.13 0.93 0 0 0.03 1 Linked to high confidence OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA With other complex events 41 0.06 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 3 202871 63948256 11 13 333 2 4 3 2 2 0.8 0.03 17 0 0 17 5 6 44 8 10 75.84 99.7 0.18 1 3 4 Whitelist OV-AU 8 0.8 0.11 0 0 0.84 1 Linked to high confidence OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA With other complex events 24 0.04 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 4 44078976 65473313 3 3 333 1 1 1 0 0 0.8 0.83 16 0 0 16 5 8 38 7 12 75.84 58.33 38.52 0 4 2 Whitelist OV-AU 0.87 0.97 0 0 0.84 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 5 11201997 11306682 2 2 333 0 0 1 1 0 0.57 0.02 4 0 0 4 3 4 15 5 5 75.84 97.34 0 0 9 7 Whitelist OV-AU 0.68 0.09 0 0 0.64 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 6 30232935 32110297 6 6 333 2 1 1 2 0 0.88 0.01 6 0 0 6 4 6 37 6 6 75.84 84.4 12.76 0 3 5 Whitelist OV-AU 0.93 0.05 0 0 0.91 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 12 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 7 88538601 89619031 4 7 333 2 2 0 0 3 0.26 0.81 5 0 0 5 5 5 25 16 16 75.84 55.97 41.03 0 3 4 Whitelist OV-AU 0.96 0.95 0 0 0.59 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 11 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 8 42562155 137393245 10 22 333 5 4 1 0 12 0.08 0 37 0 0 37 7 20 49 8 9 75.84 73.52 22.64 5 5 6 Whitelist OV-AU 2_20_3 0.62 0 0 0 0.48 1 High confidence OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA With other complex events 32 0.05 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 9 728379 35417521 1 5 333 1 3 1 0 0 0.28 0.05 9 0 0 9 3 5 10 3 5 75.84 99.32 0.01 0 4 5 Whitelist OV-AU 0.62 0.16 0 0 0.59 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 10 5444483 82028107 1 8 333 1 7 0 0 0 0 0.19 15 0 0 15 6 6 19 6 6 75.84 95.94 0.03 0 3 4 Whitelist OV-AU 0.06 0.41 0 0 0.04 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 16 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 11 6511167 122670130 1 11 333 1 10 0 0 0 0 0.6 19 0 0 19 9 16 20 9 17 75.84 99.41 0 6 4 5 Whitelist OV-AU 0 0.82 0 0 0 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 22 0.03 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 12 109163441 109612630 2 2 333 0 2 0 0 0 0.11 0.6 2 0 0 NA NA NA 23 7 13 75.84 99.92 0 0 4 7 Whitelist OV-AU 0.54 0.82 0 0 0.48 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 13 47030548 96297359 1 6 333 2 4 0 0 0 0.06 0.13 8 0 0 8 3 7 9 3 3 75.84 99.56 0.44 0 3 2 Whitelist OV-AU 0.54 0.32 0 0 0.48 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 12 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 14 28162483 98470290 1 8 333 2 6 0 0 0 0.01 0.53 16 0 0 16 5 16 17 5 5 75.84 90.02 9.07 0 3 4 Whitelist OV-AU 0.21 0.76 0 0 0.16 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 16 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 15 40540002 83438804 1 2 333 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 75.84 0.46 99.42 0 2 3 Whitelist OV-AU 0.54 0.05 NA 0 0.48 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 16 377478 89514737 1 9 333 3 3 0 1 2 0.28 0.61 18 0 0 18 5 5 19 5 5 75.84 46.33 48.21 0 2 3 Whitelist OV-AU 0.85 0.83 0 0 0.59 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 16 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 17 4454605 73045315 1 7 333 0 5 0 1 1 0.01 0.87 12 0 0 12 3 5 17 5 5 75.84 90.62 9.38 0 3 5 Whitelist OV-AU 0.47 1 0 0 0.19 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 13 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 18 60527692 69317263 1 3 333 0 2 0 0 1 0.11 0.4 6 0 0 6 3 6 10 3 9 75.84 12.35 87.61 0 4 3 Whitelist OV-AU 0.62 0.64 0 0 0.48 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 5 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 19 9493277 37617856 5 10 333 2 1 1 1 5 0.9 0 30 0 0 30 3 6 41 5 8 75.84 51.62 41.1 2 3 4 Whitelist OV-AU 1 0.96 0 0 0 0.92 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 15 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 20 34757165 60260321 3 12 333 1 1 1 0 9 0.8 0 20 0 0 20 10 10 32 10 10 75.84 62.77 30.19 10 5 6 Whitelist OV-AU 0.68 0 0 0 0.84 1 High confidence OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA With other complex events 15 0.02 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 21 18995203 31843967 4 4 333 2 0 1 1 0 0.57 0.61 5 0 0 5 5 5 9 5 5 75.84 34.15 43.2 0 2 1 Whitelist OV-AU 0.68 0.83 0 0 0.64 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 8 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 22 21020580 38922254 1 3 333 1 2 0 0 0 0.3 1 6 0 0 6 3 4 7 3 3 75.84 1.78 98.22 0 2 1 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-117 X 55641959 124943536 2 4 333 0 4 0 0 0 0.01 0.03 12 0 0 12 4 10 35 7 14 75.84 96.69 0 0 4 5 Whitelist OV-AU 0.21 0.12 0 0 0.16 1 No OV-AU AOCS-117 OV 0.88 3.36 Ovary-AdenoCA NA 8 0.01 stopgain,17_7577058_A_C,CN:2 4 OV-AU DO46416 AOCS-117 female deceased C56 54 1972 1972 NA Included Ovary-AdenoCA OV AU 1 64.87 OV-AU::AOCS-119 1 5540026 228043087 4 15 375 0 0 2 2 11 0.26 0.63 24 0 0 24 4 6 27 4 6 65.37 77.49 19.54 1 3 4 Whitelist OV-AU 5 0.62 0.84 0 0 0.59 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 2 177306608 178631663 3 5 375 1 0 1 1 2 0.8 0.01 5 0 0 5 3 5 30 5 6 65.37 79.31 18.01 0 4 3 Whitelist OV-AU 15 0.93 0.05 0 0 0.84 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 3 54274768 65916371 2 2 375 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 28 5 7 65.37 87.55 12.36 0 4 2 Whitelist OV-AU 0.68 0.06 0 0 0.64 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 4 8544928 18199764 3 3 375 0 1 1 1 0 0.8 0.53 5 0 0 5 4 5 31 7 7 65.37 18.94 78.69 0 6 7 Whitelist OV-AU 0.87 0.77 0 0 0.84 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 5 158255755 175047780 2 2 375 0 0 1 1 0 0.57 0.75 4 0 0 4 4 4 27 7 8 65.37 41.81 55.52 0 2 4 Whitelist OV-AU 0.68 0.92 0 0 0.64 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 6 15115059 142305974 1 11 375 6 2 0 0 3 0.01 0.51 23 0 0 23 4 11 26 4 13 65.37 67.14 32.71 0 4 3 Whitelist OV-AU 0.02 0.76 0 0 0.16 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 7 37130441 148521508 1 19 375 5 1 0 2 11 0.07 0.17 18 0 0 18 6 6 22 6 6 65.37 80.77 16.68 0 4 5 Whitelist OV-AU 0.68 0.38 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 27 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 8 131651731 131869700 2 2 375 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 27 4 5 65.37 99.91 0.08 0 5 7 Whitelist OV-AU 0.54 0.02 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 9 33000868 140386143 1 17 375 3 3 0 0 11 0.11 0 23 0 0 23 4 6 28 4 6 65.37 87.15 12.23 0 4 3 Whitelist OV-AU X 0.62 0.03 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 23 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 10 23022202 83962373 3 11 375 0 0 2 1 8 0.3 0.11 16 0 0 16 5 7 24 5 7 65.37 56.63 43.19 0 6 2 Whitelist OV-AU 0.87 0.28 0 0 0.59 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 11 81187609 86167346 2 2 375 0 2 0 0 0 0.11 0.07 5 0 0 5 3 5 12 4 5 65.37 91.39 8.18 0 4 3 Whitelist OV-AU 0.54 0.2 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 12 87592813 87611541 2 2 375 1 0 1 0 0 0.57 0.27 4 0 0 4 0 3 18 7 7 65.37 88.31 11.61 0 1 2 Whitelist OV-AU 0.68 0.51 0 0 0.64 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 13 27551439 50648498 1 2 375 1 1 0 0 0 0.57 0.01 4 0 0 4 3 4 7 3 3 65.37 0.16 99.7 0 2 1 Whitelist OV-AU 0.68 0.03 0 0 0.64 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 14 105175105 105283545 3 3 375 1 2 0 0 0 0.3 0 3 0 0 NA NA NA 28 5 11 65.37 96.33 0 0 7 8 Whitelist OV-AU 0.62 0 0 0 0.59 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 15 44740544 100682165 1 14 375 3 0 0 0 11 0.03 0.06 17 0 0 17 4 5 21 5 5 65.37 55.6 39.62 0 4 2 Whitelist OV-AU 0.62 0.18 0 0 0.33 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 16 56928767 57054276 2 5 375 0 0 0 2 3 0.11 0 4 0 0 4 0 3 18 3 5 65.37 61.57 33.91 0 1 4 Whitelist OV-AU 0.62 0 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 17 1269844 57949845 1 9 375 2 2 0 0 5 0.26 0.75 8 0 0 8 4 5 9 4 5 65.37 99.98 0 0 4 3 Whitelist OV-AU 15 0.85 0.92 0 0 0.59 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 18 48514972 48703087 1 2 375 2 0 0 0 0 0.11 0.15 3 0 0 NA NA NA 9 3 4 65.37 60.25 35.11 0 1 2 Whitelist OV-AU 0.54 0.34 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 19 15411723 15477009 2 2 375 2 0 0 0 0 0.11 0.71 3 0 0 NA NA NA 10 6 9 65.37 70.02 22.7 0 3 4 Whitelist OV-AU 0.54 0.9 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 20 10708699 46235770 1 3 375 1 1 0 0 1 0.57 1 6 0 0 6 3 4 8 3 4 65.37 98.96 0 0 3 5 Whitelist OV-AU 0.87 1 0 0 0.64 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 21 32202310 35725996 1 2 375 0 2 0 0 0 0.11 0.05 2 0 0 NA NA NA 5 3 5 65.37 77.35 0 0 3 5 Whitelist OV-AU 0.54 0.17 0 0 0.48 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 22 NA NA 0 0 375 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 OV-AU::AOCS-119 X 73888460 94161009 6 7 375 1 0 3 2 1 0.34 0.01 12 0 0 12 8 8 23 8 8 65.37 18.48 78.13 0 2 5 Whitelist OV-AU 0.77 0.06 0 0 0.59 0 No OV-AU AOCS-119 OV 0.32 3.29 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:3 3 OV-AU DO46420 AOCS-119 female deceased C56 65 1380 1380 NA Included Ovary-AdenoCA OV AU 1 45.39 False positive; manually removed OV-AU::AOCS-120 1 1708031 206256543 4 31 790 2 2 2 2 23 1 0 61 0 0 61 12 21 66 12 12 62.13 87.23 9.75 0 3 4 Whitelist OV-AU 11_5_8 0.54 0.01 0 0 1 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 39 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 False positive; manually removed OV-AU::AOCS-120 2 17888044 240960571 12 40 790 2 3 4 3 28 0.88 0 86 0 0 86 11 13 88 11 13 62.13 69.42 30.49 0 3 4 Whitelist OV-AU 1_12_15_5_9_X 0.81 0 0 0 0.91 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 52 0.03 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 False positive; manually removed OV-AU::AOCS-120 3 50139955 176841814 4 18 790 2 2 0 0 14 0.26 0.14 30 0 0 30 4 9 49 4 8 62.13 77.33 19.6 0 4 5 Whitelist OV-AU 1_12_15 0.54 0.34 0 0 0.59 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 22 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 4 144285285 147800012 3 3 790 0 1 1 1 0 0.8 0.02 2 0 0 NA NA NA 22 3 5 62.13 41.83 57.99 0 2 4 Whitelist OV-AU 0.87 0.07 0 0 0.84 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 5 680638 159964318 1 31 790 3 13 0 0 15 0 0.21 46 0 0 46 10 10 51 10 12 62.13 60.23 37.11 0 4 3 Whitelist OV-AU 1_10_11_15 0.21 0.44 0 0 0 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 47 0.03 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 6 13281182 152413910 3 14 790 2 0 0 1 11 0.3 1 29 0 0 29 4 6 38 6 10 62.13 84.56 15.32 0 3 2 Whitelist OV-AU 1_17_2 0.62 1 0 0 0.59 0 Linked to low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 17 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 7 113591914 147649222 2 5 790 1 1 0 0 3 0.57 0.94 10 0 0 10 3 8 39 5 10 62.13 85.9 11.43 0 2 4 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 7 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 8 59128810 114398646 2 10 790 0 2 1 1 6 0.57 0.01 21 0 0 21 9 9 47 9 9 62.13 93.99 2.48 0 4 3 Whitelist OV-AU 0.86 0.04 0 0 0.64 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 9 16411704 136399898 1 27 790 1 12 1 0 13 0 0.05 24 0 0 24 5 15 27 5 12 62.13 45.06 54.7 0 2 3 Whitelist OV-AU 2_X 0.03 0.17 0 0 0 0 Linked to low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 41 0.03 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 10 30230011 131940766 1 16 790 3 7 0 0 6 0 0.09 13 0 0 13 5 5 15 5 6 62.13 28.34 68.08 0 2 3 Whitelist OV-AU 5 0.16 0.25 0 0 0.14 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 11 11833414 60671101 2 3 790 0 0 1 1 1 0.57 0.87 10 0 0 10 5 5 29 10 10 62.13 66.67 29.26 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.64 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 5 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 12 21770067 118615376 2 28 790 1 2 2 1 22 0.88 0 33 0 0 33 6 8 42 6 8 62.13 45.14 51.11 0 2 3 Whitelist OV-AU 11_2 0.68 0 0 0 0.91 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 34 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 13 41953694 99940087 1 5 790 0 3 1 1 0 0.28 0.12 6 0 0 6 4 6 12 4 8 62.13 51.79 48.21 0 3 2 Whitelist OV-AU 0.62 0.3 0 0 0.59 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 14 54685993 59498384 2 2 790 0 0 1 1 0 0.57 0.84 3 0 0 NA NA NA 14 7 7 62.13 33.46 65.63 0 2 3 Whitelist OV-AU 0.68 0.98 0 0 0.64 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 15 40235127 98220742 1 19 790 3 5 0 0 11 0.03 0 23 0 0 23 9 13 27 9 9 62.13 42.7 52.43 0 3 2 Whitelist OV-AU 17_2_5 0.21 0.01 0 0 0.33 0 Linked to low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 27 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 16 11888178 75328528 1 11 790 0 4 0 0 7 0.01 1 12 0 0 12 5 7 17 5 7 62.13 92.44 3.03 0 3 4 Whitelist OV-AU 0.62 1 0 0 0.16 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 17 3078252 65644573 6 20 790 3 4 3 2 8 0.88 0.02 17 0 0 17 5 11 20 5 5 62.13 50.55 49.42 0 3 2 Whitelist OV-AU 15 0.77 0.07 0 0 0.91 0 Low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 32 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 18 3732593 58706474 1 14 790 0 5 0 0 9 0 0.83 13 0 0 13 4 5 15 4 5 62.13 99.89 0.07 0 4 6 Whitelist OV-AU 10_12 0.54 0.97 0 0 0.07 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 19 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 19 31017824 35366614 2 2 790 0 0 1 1 0 0.57 0.7 1 0 0 NA NA NA 13 7 9 62.13 1.53 98.3 0 2 NA Whitelist OV-AU 0.68 0.89 0 0 0.64 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 20 24772924 44101646 18 27 790 6 7 3 2 9 0.29 0 37 0 0 37 4 7 53 5 10 62.13 66.05 32.98 0 5 1 Whitelist OV-AU 9_X 0.68 0 0 0 0.59 0 Low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 45 0.03 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 21 20145240 35200171 1 6 790 1 2 0 0 3 0.3 0 10 0 0 10 3 7 15 3 7 62.13 46.77 29.57 0 4 5 Whitelist OV-AU 0.93 0 0 0 0.59 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 22 33984678 40688541 1 8 790 1 1 1 0 5 0.8 0 3 0 0 NA NA NA 9 4 4 62.13 61.21 27.68 0 2 3 Whitelist OV-AU 12 1 0.01 0 0 0.84 0 No OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-120 X 6640984 97824095 3 10 790 0 1 1 1 7 0.8 0.87 17 0 0 17 5 8 36 5 7 62.13 71.54 28 0 2 3 Whitelist OV-AU 2 0.96 1 0 0 0.84 0 Linked to low confidence OV-AU AOCS-120 OV 0.84 2.89 Ovary-AdenoCA With other complex events 13 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 OV-AU DO46424 AOCS-120 female deceased C48.2 47 2341 2341 NA Included Ovary-AdenoCA OV AU 1 77.01 OV-AU::AOCS-128 1 3190607 179536707 37 47 496 9 9 10 9 10 0.99 0 64 0 0 64 6 13 77 8 13 66.33 79.73 17.25 4 5 4 Whitelist OV-AU 2 0.68 0 0 0 1 0 Low confidence OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA With other complex events 84 0.08 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 2 19515679 227555412 7 25 496 0 0 5 2 18 0.02 0 40 0 0 40 9 15 41 9 9 66.33 89.33 10.58 3 3 4 Whitelist OV-AU 1_16_4_7_X 0.54 0.02 0 0 0.33 0 Linked to low confidence OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA With other complex events 32 0.03 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 False positive; manually removed OV-AU::AOCS-128 3 48782637 112761632 4 4 496 0 0 2 2 0 0.26 0.33 6 0 0 6 4 6 48 7 10 66.33 73.4 26.46 0 1 2 Whitelist OV-AU 0.62 0.59 0 0 0.59 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 8 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 4 8856647 35023985 3 3 496 2 1 0 0 0 0.3 0.86 10 0 0 10 7 10 34 10 10 66.33 82.33 17.46 3 3 4 Whitelist OV-AU 0.62 0.99 0 0 0.59 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 5 14430235 176586021 1 13 496 4 4 1 0 4 0.13 0.1 22 0 0 22 14 15 23 14 15 66.33 56.99 40.35 0 3 2 Whitelist OV-AU 0.62 0.26 0 0 0.55 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 22 0.02 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 6 35294574 35333651 2 3 496 0 1 1 0 1 0.57 0.13 2 0 0 NA NA NA 31 6 10 66.33 41.37 58.48 0 2 3 Whitelist OV-AU 0.87 0.32 0 0 0.64 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 5 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 7 5529579 140670365 1 22 496 5 5 0 1 11 0.06 0.07 30 0 0 30 7 14 33 7 7 66.33 85.18 14.59 0 5 3 Whitelist OV-AU 16_2_X 0.94 0.21 0 0 0.48 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 33 0.03 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 8 15375751 119314588 1 19 496 3 2 0 0 14 0.14 0.12 16 0 0 16 4 9 20 4 6 66.33 66.68 28.85 0 5 6 Whitelist OV-AU 10_20 0.87 0.31 0 0 0.59 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 24 0.02 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 9 3442601 13784617 3 3 496 1 0 1 1 0 0.8 0.3 4 0 0 4 3 4 28 4 6 66.33 84.86 15.01 0 4 5 Whitelist OV-AU 0.87 0.54 0 0 0.84 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 10 34273199 123319147 2 15 496 0 0 0 2 13 0.11 0.2 16 0 0 16 6 12 24 6 6 66.33 75.87 20.72 0 2 1 Whitelist OV-AU 14 0.85 0.42 0 0 0.48 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 17 0.02 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 11 33423900 55885265 1 2 496 1 1 0 0 0 0.57 0.16 6 0 0 6 5 6 13 5 5 66.33 48.21 48.21 0 2 1 Whitelist OV-AU 0.68 0.37 0 0 0.64 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 4 0 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 12 48056814 48424534 2 2 496 0 2 0 0 0 0.11 0.75 2 0 0 NA NA NA 15 12 12 66.33 73.62 26.3 0 3 4 Whitelist OV-AU 0.54 0.92 0 0 0.48 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 4 0 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 13 38634781 51623058 1 2 496 0 2 0 0 0 0.11 0.54 2 0 0 NA NA NA 10 4 7 66.33 15.07 84.93 0 2 3 Whitelist OV-AU 0.54 0.77 0 0 0.48 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 4 0 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 14 33477990 78335431 1 5 496 1 2 0 0 2 0.3 0.9 8 0 0 8 5 7 16 5 5 66.33 64.41 34.72 0 4 2 Whitelist OV-AU 0.93 1 0 0 0.59 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 8 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 15 75407634 77144206 2 2 496 0 0 1 1 0 0.57 0.27 2 0 0 NA NA NA 19 7 9 66.33 52.63 47.24 0 2 4 Whitelist OV-AU 0.68 0.51 0 0 0.64 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 4 0 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 16 10983970 48633676 1 8 496 1 3 0 0 4 0.11 0.01 13 0 0 13 7 13 18 7 7 66.33 94.16 5.5 0 4 5 Whitelist OV-AU 17 0.62 0.05 0 0 0.48 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 12 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 17 36563670 61533021 2 4 496 0 0 1 1 2 0.57 0.89 10 0 0 10 5 10 14 8 14 66.33 26.24 73.74 0 2 3 Whitelist OV-AU 5 0.62 1 0 0 0.64 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 18 2800938 55211741 1 10 496 0 4 1 0 5 0.04 0.68 12 0 0 12 7 8 12 7 7 66.33 74.53 20.8 0 2 1 Whitelist OV-AU 11 0.54 0.88 0 0 0.36 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 15 0.02 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 19 13930239 15483568 1 8 496 1 1 1 0 5 0.8 0 6 0 0 6 6 6 12 7 7 66.33 73.61 26.22 0 4 5 Whitelist OV-AU 22 0.87 0.02 0 0 0.84 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 11 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 20 11284294 25291268 4 8 496 1 1 1 1 4 1 0.03 9 0 0 9 8 9 20 8 9 66.33 86.08 7.37 0 1 2 Whitelist OV-AU 0.87 0.11 0 0 1 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 12 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 False positive; manually removed OV-AU::AOCS-128 21 16904951 33088753 1 3 496 1 2 0 0 0 0.3 0.06 6 0 0 6 4 6 13 5 5 66.33 77.35 0 0 4 5 Whitelist OV-AU 0.62 0.19 0 0 0.59 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 22 40876298 47165436 1 5 496 0 1 1 1 2 0.8 0.09 5 0 0 5 5 5 12 5 6 66.33 63.88 35.8 0 2 3 Whitelist OV-AU 19 0.93 0.26 0 0 0.84 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 8 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-128 X 40320844 140849707 1 10 496 1 1 0 1 7 0.8 0.18 8 0 0 8 5 8 10 5 5 66.33 61.74 38.03 0 3 2 Whitelist OV-AU 7 0.68 0.4 0 0 0.84 0 No OV-AU AOCS-128 OV 0.37 3.11 Ovary-AdenoCA NA 13 0.01 stopgain,17_7578275_A_G,CN:3 3 OV-AU DO46448 AOCS-128 female deceased C56 45 654 654 NA Included Ovary-AdenoCA OV AU 1 21.51 OV-AU::AOCS-138 1 194354177 198217179 7 11 323 1 4 1 1 4 0.28 0 5 0 0 5 3 5 24 9 9 36.49 13.1 86.9 0 2 1 Whitelist OV-AU 10 0.74 0 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 18 0.03 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 2 24454660 201203392 1 10 323 2 3 0 0 5 0.14 0.19 9 0 0 9 5 9 10 5 5 36.49 48.46 48.85 0 1 2 Whitelist OV-AU 3 0.68 0.41 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 15 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 3 15240189 187056378 1 21 323 3 4 0 2 12 0.27 0.01 13 0 0 13 5 13 15 5 5 36.49 15.41 84.45 0 2 3 Whitelist OV-AU 2_5 0.84 0.03 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 30 0.05 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 4 91175020 172628143 1 4 323 2 0 0 0 2 0.11 0 5 0 0 5 3 5 6 3 3 36.49 43.11 56.79 0 2 1 Whitelist OV-AU 5 0.68 0.01 0 0 0.48 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 6 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 5 96175581 171118223 1 5 323 0 5 0 0 0 0 0.91 10 0 0 10 10 10 15 11 11 36.49 24.71 72.62 0 2 3 Whitelist OV-AU 0.1 1 0 0 0.07 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 6 34266114 131202312 1 10 323 1 3 1 0 5 0.28 0.29 8 0 0 8 8 8 8 8 8 36.49 29.92 69.94 0 1 2 Whitelist OV-AU 0.68 0.54 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 15 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 7 45697847 69610567 3 4 323 0 1 1 1 1 0.8 0.06 4 0 0 4 3 4 11 8 8 36.49 42.28 57.5 0 2 1 Whitelist OV-AU 0.68 0.2 0 0 0.84 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 7 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 8 18244782 136209703 1 10 323 3 5 0 0 2 0.03 0.01 19 0 0 19 10 19 22 10 10 36.49 66.82 29.65 0 3 4 Whitelist OV-AU 0.62 0.04 0 0 0.33 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 18 0.03 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 9 11686248 12033335 2 2 323 1 1 0 0 0 0.57 0.04 4 0 0 4 3 4 23 7 7 36.49 20.06 76.83 0 2 0 Whitelist OV-AU 0.68 0.15 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 10 67986362 103062290 1 11 323 1 1 0 0 9 0.57 0.04 8 0 0 8 8 8 11 10 10 36.49 50.51 49.31 0 1 2 Whitelist OV-AU 2_8 0.62 0.15 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 13 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 11 81351693 116485351 1 3 323 1 2 0 0 0 0.3 0.01 6 0 0 6 6 6 8 8 8 36.49 44.35 55.09 0 1 2 Whitelist OV-AU 0.62 0.05 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 6 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 12 26853988 99293506 1 11 323 2 4 1 1 3 0.39 0.02 9 0 0 9 3 8 16 3 4 36.49 23.99 76 0 2 1 Whitelist OV-AU 0.62 0.1 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 19 0.03 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 13 42772843 43080155 1 1 323 0 1 0 0 0 0.39 0.76 2 0 NA NA NA NA 8 4 5 36.49 64.68 35.32 0 2 4 Whitelist OV-AU 0.62 0.92 0 NA 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 14 68852440 105900165 1 6 323 1 2 0 1 2 0.57 0.04 9 0 0 9 4 9 10 5 5 36.49 1.66 97.98 0 2 3 Whitelist OV-AU 0.93 0.13 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 15 22992415 48591211 1 2 323 0 1 1 0 0 0.57 0.61 3 0 0 NA NA NA 5 3 3 36.49 36.75 63.15 0 1 2 Whitelist OV-AU 0.68 0.83 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 16 3285253 74810087 1 8 323 0 2 0 0 6 0.11 0.16 13 0 0 13 9 11 14 9 11 36.49 78.31 21.36 0 1 2 Whitelist OV-AU 3 0.62 0.37 0 0 0.48 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 17 2564183 77774988 1 10 323 2 2 0 1 5 0.53 0.23 9 0 0 9 3 4 9 3 4 36.49 55.95 44.05 0 1 2 Whitelist OV-AU 0.86 0.47 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 15 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 18 NA NA 0 0 323 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.17 NA NA NA 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 19 17140604 17309117 2 2 323 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 4 3 3 36.49 34 65.82 0 2 3 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 20 486376 49396071 1 7 323 1 2 0 0 4 0.3 0.08 8 0 0 8 4 8 10 5 5 36.49 32.36 66.65 0 2 3 Whitelist OV-AU 0.96 0.23 0 0 0.59 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 21 NA NA 0 0 323 0 0 0 0 0 NA 0.3 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.55 0 NA NA 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 22 NA NA 0 0 323 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.54 0 NA NA 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-138 X 21170971 33330152 2 2 323 0 0 1 1 0 0.57 0.45 1 0 0 NA NA NA 14 8 8 36.49 26.45 73.32 0 2 NA Whitelist OV-AU 0.68 0.69 0 0 0.64 0 No OV-AU AOCS-138 OV 0.65 1.78 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7577562_AACA_-,CN:2 2 OV-AU DO46488 AOCS-138 female deceased C56 57 1421 1421 NA Included Ovary-AdenoCA OV AU 1 46.74 OV-AU::AOCS-139 1 159497150 207592387 2 6 542 0 0 1 1 4 0.57 0.23 9 0 0 9 8 9 44 15 15 66.6 67.03 32.97 0 2 3 Whitelist OV-AU 0.93 0.47 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 2 48598839 187592335 4 11 542 1 0 1 2 7 0.57 0 45 0 0 45 8 19 74 8 14 66.6 87.4 12.49 0 3 4 Whitelist OV-AU 4_6 0.62 0 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 False positive; manually removed OV-AU::AOCS-139 3 34105176 34381935 3 3 542 0 1 1 1 0 0.8 0.02 1 0 0 NA NA NA 40 7 7 66.6 92.41 7.56 0 3 NA Whitelist OV-AU 0.87 0.09 0 0 0.84 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 4 25070704 182597223 1 16 542 5 4 0 0 7 0.03 0.17 16 0 0 16 5 16 16 5 5 66.6 56.09 43.7 0 2 3 Whitelist OV-AU 2 0.79 0.38 0 0 0.33 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 5 16559926 179967726 1 27 542 2 9 1 0 15 0 0.59 28 0 0 28 5 13 31 5 5 66.6 65.76 34.11 0 3 2 Whitelist OV-AU 1_7 0.54 0.81 0 0 0.05 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 39 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 6 7505549 166697296 1 18 542 1 8 0 0 9 0 0.79 28 0 0 28 10 14 29 10 10 66.6 66.52 33.34 0 4 3 Whitelist OV-AU X 0.01 0.94 0 0 0.02 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 27 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 7 51378978 151817246 1 20 542 3 8 0 2 7 0.01 0.1 29 0 0 29 8 18 34 8 10 66.6 85.84 13.94 0 3 4 Whitelist OV-AU 5 0.41 0.27 0 0 0.24 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 33 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 8 48696966 144814173 1 19 542 5 7 0 0 7 0.01 0.12 39 0 0 39 8 10 40 8 10 66.6 99.96 0.04 0 8 6 Whitelist OV-AU 15_4 0.1 0.3 0 0 0.16 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 31 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 9 12984266 140536546 1 20 542 2 5 0 0 13 0.02 0.1 29 0 0 29 7 11 30 7 7 66.6 99.49 0 1 5 4 Whitelist OV-AU 11_2_4_6 0.54 0.26 0 0 0.33 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 27 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 10 16308686 131257322 3 7 542 0 0 1 2 4 0.3 0.92 14 0 0 14 6 8 18 6 10 66.6 63.82 35.95 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 11 97517122 129852368 3 9 542 0 0 1 2 6 0.3 0.01 11 0 0 11 8 11 39 9 11 66.6 83.67 15.9 0 4 5 Whitelist OV-AU 17_2 0.68 0.03 0 0 0.59 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 False positive; manually removed OV-AU::AOCS-139 12 6411638 125531676 1 20 542 3 8 1 0 8 0.01 0.26 34 0 0 34 7 12 36 7 10 66.6 71.01 28.91 0 3 2 Whitelist OV-AU X 0.62 0.5 0 0 0.16 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 32 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 13 52353315 73671700 2 2 542 0 0 1 1 0 0.57 0.81 3 0 0 NA NA NA 11 3 3 66.6 76.19 21.04 0 3 4 Whitelist OV-AU 0.68 0.96 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 14 42855100 48404770 2 2 542 0 0 1 1 0 0.57 0.9 1 0 0 NA NA NA 10 3 6 66.6 51.86 47.23 0 3 NA Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 15 37623815 47490290 2 3 542 0 0 1 1 1 0.57 0.12 5 0 0 5 5 5 13 11 11 66.6 39.36 60.64 0 3 2 Whitelist OV-AU 0.62 0.3 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 5 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 16 65315383 89250305 3 5 542 2 1 0 0 2 0.3 0.69 4 0 0 4 4 4 14 5 7 66.6 56.4 43.5 0 1 2 Whitelist OV-AU 0.62 0.89 0 0 0.59 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 17 26827564 74272265 1 9 542 0 4 0 0 5 0.01 0.79 8 0 0 8 5 8 8 5 5 66.6 28.67 70.4 0 3 2 Whitelist OV-AU 15_2 0.41 0.94 0 0 0.16 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 18 3848249 77030816 1 17 542 3 6 0 0 8 0.01 0.02 21 0 0 21 6 13 22 6 6 66.6 73.84 26.12 0 3 4 Whitelist OV-AU 7 0.41 0.07 0 0 0.21 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 19 3448622 47395510 1 8 542 0 1 1 1 5 0.8 0.88 7 0 0 7 4 7 9 4 7 66.6 57.77 34.95 0 3 2 Whitelist OV-AU 11_12 0.62 1 0 0 0.84 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 20 4859585 62373533 1 14 542 1 6 0 0 7 0 0.01 18 0 0 18 8 10 19 8 10 66.6 70.1 22.66 0 4 3 Whitelist OV-AU 5_7 0.49 0.05 0 0 0.09 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 21 16575030 33863533 1 6 542 0 2 0 0 4 0.11 0.05 5 0 0 5 0 4 8 4 5 66.6 69.98 0 0 3 4 Whitelist OV-AU 1 0.62 0.16 0 0 0.48 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 22 18467411 37747867 1 4 542 0 4 0 0 0 0.01 0.69 7 0 0 7 6 7 10 7 7 66.6 78.12 21.88 0 3 4 Whitelist OV-AU 0.21 0.89 0 0 0.16 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-139 X 69174585 97165171 2 10 542 0 0 1 1 8 0.57 0.56 5 0 0 5 5 5 25 9 9 66.6 0.73 99.27 0 2 3 Whitelist OV-AU 12_6_7 0.68 0.78 0 0 0.64 0 No OV-AU AOCS-139 OV 0.49 3.07 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-AU DO46493 AOCS-139 female alive C56 62 839 839 NA Included Ovary-AdenoCA OV AU 1 27.6 OV-AU::AOCS-141 1 106171203 117860334 1 3 79 1 0 0 1 1 0.57 0.83 5 0 0 5 5 5 12 7 7 52.98 54.37 42.65 0 2 1 Whitelist OV-AU 0.62 0.97 0 0 0.64 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 5 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 2 3049377 184079007 1 7 79 3 1 0 1 2 0.28 0.54 9 0 0 9 3 5 9 3 5 52.98 99.87 0.03 0 3 4 Whitelist OV-AU 0.47 0.77 0 0 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 12 0.08 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 3 88647223 90486250 5 5 79 1 0 1 3 0 0.28 0 2 0 0 NA NA NA 16 6 7 52.98 52.67 44.26 0 2 3 Whitelist OV-AU 0.62 0.01 0 0 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 10 0.06 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 4 NA NA 0 0 79 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.2 NA NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 5 NA NA 0 0 79 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.48 NA NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 6 62280178 75623961 1 2 79 0 0 1 1 0 0.57 0.63 2 NA 0 NA NA NA 4 4 4 52.98 63.37 33.78 0 2 3 Whitelist OV-AU 0.68 0.84 NA 0 0.64 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 4 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 7 70012050 110157249 1 2 79 2 0 0 0 0 0.11 0.45 3 NA 0 NA NA NA 7 3 5 52.98 97.15 0.13 1 3 2 Whitelist OV-AU 0.54 0.69 NA 0 0.48 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 4 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 8 38569891 102988118 1 5 79 1 1 1 2 0 0.9 0.02 12 0 0 12 4 8 13 4 6 52.98 68.43 28.15 0 4 3 Whitelist OV-AU 0.93 0.08 0 0 0.92 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 10 0.06 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 9 89500840 90453359 1 1 79 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 52.98 0 99.3 0 2 NA Whitelist OV-AU 0.62 0.63 NA NA 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 2 0.01 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 10 19157649 22815451 1 3 79 0 2 0 0 1 0.11 0.18 1 0 0 NA NA NA 4 3 3 52.98 99.93 0 0 4 NA Whitelist OV-AU 0.62 0.4 0 0 0.48 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 5 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 11 NA NA 0 0 79 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.67 0 NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 12 31436961 113604487 2 3 79 1 0 1 0 1 0.57 0.03 3 0 0 NA NA NA 5 5 5 52.98 99.36 0 0 4 3 Whitelist OV-AU 0.87 0.12 0 0 0.64 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 5 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 13 47214549 63598446 1 3 79 1 1 0 1 0 0.8 0.35 5 0 0 5 3 4 5 3 4 52.98 45.72 54.28 4 2 0 Whitelist OV-AU 0.87 0.6 0 0 0.84 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 6 0.04 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 14 55554171 104095658 1 2 79 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA 5 0 5 52.98 26.51 69.79 0 2 3 Whitelist OV-AU 0.68 1 NA 0 0.64 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 4 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 15 79222421 79248241 1 1 79 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 52.98 0 99.9 0 2 NA Whitelist OV-AU 0.62 0.9 NA NA 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 2 0.01 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 16 61658557 87496248 1 3 79 1 2 0 0 0 0.3 0.47 4 0 0 4 4 4 5 5 5 52.98 0.05 99.86 1 2 3 Whitelist OV-AU 0.62 0.72 0 0 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 6 0.04 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 17 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 18 37218524 37376858 1 1 79 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 52.98 17.98 81.99 0 2 NA Whitelist OV-AU 0.62 0.9 NA NA 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 2 0.01 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 19 860492 38200718 2 3 79 0 0 1 1 1 0.57 0 5 0 0 5 0 3 7 0 3 52.98 39.64 53.09 0 2 4 Whitelist OV-AU 0.62 0.03 0 0 0.64 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 5 0.03 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 20 59766827 59782828 1 1 79 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 52.98 92.98 0 0 4 6 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 2 0.01 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-141 X NA NA 0 0 79 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 0 NA NA 0 No OV-AU AOCS-141 OV 0.6 2.73 Ovary-AdenoCA NA 0 0 NA 3 OV-AU DO46498 AOCS-141 female alive C56 62 1618 1618 NA Included Ovary-AdenoCA OV AU 1 53.22 OV-AU::AOCS-142 1 14110378 72283225 5 25 587 2 3 1 4 15 0.57 0.04 41 0 0 41 5 11 60 6 8 66.93 96.23 3.77 10 7 9 Whitelist OV-AU 0.81 0.13 0 0 0.64 1 Linked to low confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 35 0.03 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 2 140841177 141565282 3 3 587 0 3 0 0 0 0.03 0.71 3 0 0 NA NA NA 39 6 7 66.93 79.67 17.47 0 3 4 Whitelist OV-AU 0.41 0.9 0 0 0.33 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 3 9535853 191740050 1 15 587 4 3 1 0 7 0.17 0 19 0 0 19 6 17 20 6 6 66.93 96.84 0.01 0 5 3 Whitelist OV-AU 22 0.62 0 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 23 0.02 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 4 52826977 104671727 22 41 587 3 3 10 6 19 0.11 0.01 52 0 0 52 7 8 55 7 8 66.93 16.74 83.24 0 7 8 Whitelist OV-AU 0.54 0.03 0 0 0.48 1 High confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 63 0.05 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 5 5590317 141885072 1 28 587 3 2 0 0 23 0.14 0.73 34 0 0 34 7 12 35 7 7 66.93 71.13 26.19 0 2 4 Whitelist OV-AU 0.62 0.91 0 0 0.59 1 Linked to low confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 33 0.03 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 6 73883485 159307243 13 26 587 1 2 2 8 13 0.02 0 30 0 0 30 4 6 75 8 8 66.93 75.76 21.03 9 2 3 Whitelist OV-AU 0.62 0 0 0 0.33 1 Low confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 39 0.03 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 7 978895 144549792 1 24 587 5 1 0 1 17 0.04 0.85 27 0 0 27 6 15 27 6 6 66.93 96.51 0 2 4 5 Whitelist OV-AU 1 0.62 0.99 0 0 0.38 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 31 0.03 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 8 35024834 35538986 10 12 587 5 1 2 2 2 0.31 0 17 0 0 17 4 11 86 13 13 66.93 72.66 23.91 0 6 5 Whitelist OV-AU 1 0.62 0 0 0 0.59 1 Low confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 22 0.02 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 9 3868989 119410536 1 15 587 2 4 0 0 9 0.06 0.34 14 0 0 14 5 14 15 5 5 66.93 88.08 11.22 0 3 2 Whitelist OV-AU 15 0.54 0.59 0 0 0.48 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 10 2950088 32730004 16 70 587 7 2 3 4 54 0.32 0 96 0 0 96 4 5 143 7 7 66.93 70.73 25.56 12 15 14 Whitelist OV-AU 1_5_7 0.68 0 0 0 0.59 1 Low confidence OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA With other complex events 86 0.07 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 11 27056621 37471510 4 7 587 0 0 2 2 3 0.26 0 4 0 0 4 4 4 49 6 9 66.93 61.9 37.67 0 2 3 Whitelist OV-AU 0.54 0 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 12 61105276 61118559 4 4 587 2 1 1 0 0 0.57 0 3 0 0 NA NA NA 49 5 6 66.93 96.24 0.02 0 3 4 Whitelist OV-AU 0.68 0.01 0 0 0.64 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 13 30498714 109402884 1 6 587 3 0 0 1 2 0.11 0.07 9 0 0 9 4 7 11 4 4 66.93 35.41 64.59 0 1 2 Whitelist OV-AU 0.54 0.21 0 0 0.48 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 14 22759444 107037529 1 15 587 3 0 1 2 9 0.34 0.91 11 0 0 11 3 6 12 3 3 66.93 29.29 70.42 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 15 70993518 83605127 1 4 587 1 1 1 0 1 0.8 0.1 10 0 0 10 6 10 20 8 8 66.93 37.96 62.04 0 3 4 Whitelist OV-AU 1 0.27 0 0 0.84 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 16 3782479 27020789 1 3 587 2 0 0 0 1 0.11 0.02 5 0 0 5 3 5 7 4 4 66.93 73.51 26.39 0 2 1 Whitelist OV-AU 0.62 0.08 0 0 0.48 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 5 0 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 17 3803981 77967157 1 8 587 2 1 0 0 5 0.3 0.16 11 0 0 11 4 11 13 4 4 66.93 43.5 52.06 0 2 3 Whitelist OV-AU 0.68 0.37 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 18 14197129 14231110 2 2 587 0 0 1 1 0 0.57 0.37 1 0 0 NA NA NA 20 5 5 66.93 42.4 52.29 0 4 NA Whitelist OV-AU 0.68 0.62 0 0 0.64 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 19 2136472 49511561 1 6 587 3 2 1 0 0 0.34 0.55 7 0 0 7 3 4 8 3 3 66.93 99.83 0 0 4 5 Whitelist OV-AU 0.62 0.78 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 20 24345607 31814875 2 2 587 0 1 0 1 0 0.57 0.01 4 0 0 4 0 3 25 6 6 66.93 57.32 35.42 0 3 4 Whitelist OV-AU 0.68 0.03 0 0 0.64 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 21 28371409 43842896 1 2 587 1 1 0 0 0 0.57 0.34 4 0 0 4 3 4 7 3 3 66.93 65.09 12.26 0 3 2 Whitelist OV-AU 0.68 0.59 0 0 0.64 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 22 26467021 31688992 1 5 587 0 0 1 0 4 0.39 0.08 8 0 0 8 5 8 18 5 5 66.93 96.13 3.87 0 4 3 Whitelist OV-AU 3 0.68 0.23 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-142 X 39152850 137846637 1 13 587 3 2 1 0 7 0.34 0.07 28 0 0 28 6 6 30 6 6 66.93 44.77 51.84 0 2 3 Whitelist OV-AU 0.62 0.21 0 0 0.59 1 No OV-AU AOCS-142 OV 0.4 3.64 Ovary-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578404_C_A,CN:4 3 OV-AU DO46503 AOCS-142 female alive C56 71 950 950 NA Included Ovary-AdenoCA OV AU 1 31.25 OV-AU::AOCS-150 1 34229044 113214821 2 8 428 0 0 1 3 4 0.11 0 19 0 0 19 6 12 47 6 10 67.91 92.93 7.07 0 4 3 Whitelist OV-AU 12 0.54 0.01 0 0 0.48 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 2 11605377 242867067 1 24 428 3 8 0 0 13 0 0.49 32 0 0 32 7 13 33 7 13 67.91 99.84 0.07 0 3 4 Whitelist OV-AU 1_11_4_8 0.62 0.73 0 0 0.07 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 35 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 3 107604489 107772497 3 5 428 0 3 0 0 2 0.03 0.13 4 0 0 4 0 3 39 5 7 67.91 90.32 9.56 0 4 7 Whitelist OV-AU 8 0.62 0.32 0 0 0.33 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 4 524603 84349370 1 16 428 0 5 0 0 11 0 0.85 19 0 0 19 6 10 25 6 12 67.91 99.98 0 1 6 4 Whitelist OV-AU 2 0.62 0.98 0 0 0.07 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 5 175233 56407292 5 8 428 1 1 2 1 3 0.9 0.92 9 0 0 9 7 8 20 8 9 67.91 32.25 67.6 0 6 5 Whitelist OV-AU 0.87 1 0 0 0.92 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 False positive; manually removed OV-AU::AOCS-150 6 34474425 84968074 5 8 428 1 1 1 2 3 0.9 0.07 8 0 0 8 8 8 27 8 8 67.91 56.05 43.78 0 3 4 Whitelist OV-AU 8 0.87 0.2 0 0 0.92 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 False positive; manually removed OV-AU::AOCS-150 7 835201 87501872 1 12 428 4 3 0 0 5 0.06 0.59 15 0 0 15 6 9 18 7 7 67.91 73.92 25.86 0 4 2 Whitelist OV-AU 8 0.62 0.81 0 0 0.48 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 8 29804740 127337992 1 28 428 4 5 0 1 18 0.08 0 32 0 0 32 5 5 41 5 5 67.91 82.23 17.76 0 4 10 Whitelist OV-AU 10_11_15_2_6_7 0.62 0 0 0 0.48 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 38 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 9 34035855 126155581 1 11 428 2 2 1 0 6 0.53 0.05 13 0 0 13 3 6 17 4 4 67.91 62.47 37.38 0 4 2 Whitelist OV-AU 0.74 0.15 0 0 0.64 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 10 21669392 127430410 1 10 428 1 6 1 0 2 0.01 0.2 9 0 0 9 5 5 13 5 6 67.91 71.83 27.99 0 4 7 Whitelist OV-AU 8 0.54 0.43 0 0 0.21 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 11 17454833 117019885 3 11 428 1 1 0 1 8 0.8 0.11 20 0 0 20 5 5 31 5 8 67.91 86.68 12.76 0 4 5 Whitelist OV-AU 2_8 0.74 0.28 0 0 0.84 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 12 86423815 90744344 2 2 428 0 1 1 0 0 0.57 0.73 5 0 0 5 5 5 20 6 7 67.91 90.41 9.57 0 4 6 Whitelist OV-AU 0.68 0.91 0 0 0.64 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 13 55354117 55373143 1 1 428 0 1 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 67.91 0.01 99.99 0 2 NA Whitelist OV-AU 0.62 0.01 0 NA 0.59 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 14 44697162 44712776 1 1 428 0 1 0 0 0 0.39 0.89 2 0 NA NA NA NA 7 5 7 67.91 2.55 96.53 0 2 4 Whitelist OV-AU 0.62 1 0 NA 0.59 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 15 38740794 93349546 1 18 428 3 6 0 0 9 0.01 0 21 0 0 21 8 17 24 8 8 67.91 51.41 48.41 0 4 5 Whitelist OV-AU 6_8 0.41 0.02 0 0 0.21 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 27 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 16 10500688 87797760 1 11 428 3 1 0 0 7 0.11 0.1 10 0 0 10 3 3 11 3 4 67.91 93.29 6.61 0 6 2 Whitelist OV-AU 7 0.87 0.26 0 0 0.48 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 17 1078674 41214309 1 8 428 0 4 0 0 4 0.01 0.07 10 0 0 10 3 5 15 3 6 67.91 52.67 47.06 0 2 4 Whitelist OV-AU 0.54 0.21 0 0 0.16 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 18 33088145 34380524 2 2 428 0 2 0 0 0 0.11 0.18 4 0 0 4 3 4 11 3 4 67.91 91.77 8.2 0 6 4 Whitelist OV-AU 0.54 0.39 0 0 0.48 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 19 9080908 9243022 4 6 428 1 0 2 1 2 0.57 0.01 11 0 0 11 0 4 18 4 6 67.91 70.11 21.58 0 6 4 Whitelist OV-AU 0.62 0.04 0 0 0.64 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 20 23927533 58700794 1 8 428 0 5 0 0 3 0 0.02 13 0 0 13 3 6 17 6 8 67.91 75.4 24.36 0 5 3 Whitelist OV-AU 0.54 0.07 0 0 0.07 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 21 35261319 35328447 1 1 428 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 67.91 43.24 34.11 0 2 NA Whitelist OV-AU 0.62 0.75 NA NA 0.59 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 22 46950740 46987753 1 1 428 0 1 0 0 0 0.39 0.82 1 0 NA NA NA NA NA NA NA 67.91 100 0 0 4 NA Whitelist OV-AU 0.62 0.96 0 NA 0.59 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-150 X 14843777 32336644 1 2 428 1 1 0 0 0 0.57 0 4 0 0 4 3 4 6 3 3 67.91 35.47 64.3 0 1 0 Whitelist OV-AU 0.68 0.01 0 0 0.64 0 No OV-AU AOCS-150 OV 0.43 3.29 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46542 AOCS-150 female deceased C48.2 55 1147 1147 NA Included Ovary-AdenoCA OV AU 1 37.73 OV-AU::AOCS-153 1 78956017 180480316 2 8 194 0 0 2 2 4 0.26 0.01 5 0 0 5 5 5 14 7 7 41.32 12.17 87.83 0 2 3 Whitelist OV-AU 0.62 0.04 0 0 0.59 1 Linked to high confidence OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA Canonical without polyploidization 12 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 2 15959978 208547858 1 5 194 4 1 0 0 0 0.04 0.07 10 0 0 10 10 10 11 11 11 41.32 21.75 78.13 0 1 2 Whitelist OV-AU 0.45 0.2 0 0 0.36 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 3 73753832 116449820 3 4 194 0 1 1 1 1 0.8 0.01 4 0 0 4 4 4 13 7 10 41.32 54.8 45.08 0 2 3 Whitelist OV-AU 0.68 0.03 0 0 0.84 1 Linked to high confidence OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA Canonical without polyploidization 7 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 4 86943994 96650464 2 2 194 0 0 1 1 0 0.57 0.89 1 0 0 NA NA NA 9 9 9 41.32 0.77 99.21 0 2 NA Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 5 37945346 37965081 2 2 194 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA 10 3 4 41.32 46.49 53.39 0 2 NA Whitelist OV-AU 0.68 0.07 0 0 0.64 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 6 57523049 164874061 1 3 194 2 1 0 0 0 0.3 0.76 5 0 0 5 3 5 9 5 8 41.32 58.7 40.93 0 1 2 Whitelist OV-AU 0.62 0.93 0 0 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 7 25315996 122656210 1 7 194 2 1 0 0 4 0.3 0.42 8 0 0 8 3 8 12 4 4 41.32 28.88 70.88 0 2 1 Whitelist OV-AU 9 0.96 0.67 0 0 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 8 64267096 141656348 1 13 194 5 1 0 0 7 0.01 0 14 0 0 14 3 6 16 3 8 41.32 99.93 0.06 0 3 4 Whitelist OV-AU 1 0.41 0.02 0 0 0.19 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 9 8681607 81817741 2 5 194 0 0 2 2 1 0.26 0.19 5 0 0 5 5 5 7 6 6 41.32 22.82 77.02 0 2 3 Whitelist OV-AU 0.62 0.41 0 0 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 10 7218126 104618024 1 8 194 4 2 0 0 2 0.06 0.3 11 0 0 11 5 11 12 5 5 41.32 3.37 96.45 0 2 1 Whitelist OV-AU 0.41 0.55 0 0 0.48 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 11 6869185 128159617 3 10 194 1 2 0 3 4 0.34 0.03 8 0 0 8 7 8 9 7 7 41.32 45.47 54.1 0 3 4 Whitelist OV-AU 1_3 0.68 0.1 0 0 0.59 1 High confidence OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA After polyploidization 16 0.04 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 12 619106 49493512 1 2 194 1 1 0 0 0 0.57 0.39 2 0 0 NA NA NA 4 4 4 41.32 57.26 42.72 0 1 2 Whitelist OV-AU 0.68 0.64 0 0 0.64 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 13 26775601 52960518 1 2 194 2 0 0 0 0 0.11 0.69 3 0 0 NA NA NA NA NA NA 41.32 100 0 0 1 0 Whitelist OV-AU 0.54 0.89 0 0 0.48 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 14 22860270 68792625 1 4 194 3 1 0 0 0 0.11 0.41 4 0 0 4 4 4 9 7 7 41.32 41.01 58.07 0 1 2 Whitelist OV-AU 0.54 0.65 0 0 0.48 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 15 NA NA 0 0 194 0 0 0 0 0 NA 0.27 NA 0 NA NA NA NA 9 7 7 0 0 0 0 0 0 Whitelist OV-AU NA 0.51 0 NA NA 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 16 13685936 71912286 1 6 194 1 2 1 1 1 0.9 0.02 6 0 0 6 3 4 7 3 3 41.32 38.35 61.56 0 1 2 Whitelist OV-AU 0.93 0.08 0 0 0.92 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 17 71040589 73192278 1 2 194 1 1 0 0 0 0.57 1 2 0 0 NA NA NA 4 3 3 41.32 100 0 0 3 5 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 18 NA NA 0 0 194 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.21 NA NA NA 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 19 39514115 50309708 1 1 194 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 6 3 6 41.32 76.49 15.14 0 1 4 Whitelist OV-AU 0.62 0.95 NA NA 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 20 30060824 30400055 1 1 194 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 41.32 0 99.01 0 2 NA Whitelist OV-AU 0.62 0.7 NA NA 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 21 15300157 15339843 1 1 194 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 41.32 0.08 77.27 0 1 2 Whitelist OV-AU 0.62 0.91 NA NA 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 22 45362897 46838057 1 1 194 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 41.32 2.88 97.12 0 2 3 Whitelist OV-AU 0.62 0.91 NA NA 0.59 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-153 X NA NA 0 0 194 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.49 0 NA NA 1 No OV-AU AOCS-153 OV 0.71 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578393_T_A,CN:1 2 OV-AU DO46551 AOCS-153 female deceased C56 58 1055 1055 NA Included Ovary-AdenoCA OV AU 1 34.7 OV-AU::AOCS-155 1 3617924 203373843 1 7 268 4 1 0 0 2 0.04 0.65 16 0 0 16 5 7 17 5 7 72.15 99.98 0.02 0 4 2 Whitelist OV-AU 0.62 0.86 0 0 0.36 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 12 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 2 116979827 242917384 19 19 268 6 6 3 4 0 0.7 0 40 0 0 40 16 21 50 16 16 72.15 99.9 0.01 0 4 3 Whitelist OV-AU 0.81 0 0 0 0.78 1 High confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 38 0.07 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 3 13195481 187936769 2 11 268 0 0 2 2 7 0.26 0.15 16 0 0 16 4 6 16 4 6 72.15 67.22 32.73 0 4 6 Whitelist OV-AU 2 0.74 0.35 0 0 0.59 1 Linked to high confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 15 0.03 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 4 NA NA 0 0 268 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 0.16 0 NA NA 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 0 0 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 5 53957804 111395867 1 3 268 2 0 0 0 1 0.11 0.8 4 0 0 4 4 4 7 7 7 72.15 74.82 25.06 0 2 4 Whitelist OV-AU 0.62 0.95 0 0 0.48 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 5 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 6 78169766 148284734 3 3 268 1 2 0 0 0 0.3 0.15 2 0 0 NA NA NA 4 3 4 72.15 31.38 68.48 0 2 3 Whitelist OV-AU 0.62 0.36 0 0 0.59 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 6 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 7 45881211 149021203 1 8 268 2 1 1 0 4 0.57 1 13 0 0 13 5 10 15 5 10 72.15 84.56 13.07 0 4 5 Whitelist OV-AU 2 0.87 1 0 0 0.64 1 Linked to high confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 12 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 8 85224025 108868450 3 3 268 1 1 1 0 0 0.8 0.33 3 0 0 NA NA NA 14 4 5 72.15 82.77 16.73 0 4 3 Whitelist OV-AU 0.87 0.58 0 0 0.84 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 6 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 9 244125 101744258 1 8 268 5 0 1 1 1 0.04 0.15 7 0 0 7 5 7 10 5 9 72.15 99.25 0.05 0 4 2 Whitelist OV-AU 0.28 0.36 0 0 0.38 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 15 0.03 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 10 74793193 121175756 1 4 268 1 1 0 0 2 0.57 0.24 4 0 0 4 3 4 6 3 3 72.15 77.07 22.71 0 4 2 Whitelist OV-AU 1 1 0.48 0 0 0.64 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 6 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 11 25400263 118816181 1 4 268 3 1 0 0 0 0.11 1 5 0 0 5 4 5 7 4 4 72.15 62.61 36.76 0 2 4 Whitelist OV-AU 0.54 1 0 0 0.48 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 8 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 12 346779 133353547 1 8 268 2 1 0 0 5 0.3 0.11 13 0 0 13 3 6 14 3 3 72.15 99.48 0.07 0 4 6 Whitelist OV-AU 0.62 0.29 0 0 0.59 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 11 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 13 NA NA 0 0 268 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 1 0 NA NA 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 0 0 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 14 42944415 48330098 1 2 268 2 0 0 0 0 0.11 0.86 4 0 0 4 3 4 6 4 6 72.15 56.66 43.19 0 4 2 Whitelist OV-AU 0.54 0.99 0 0 0.48 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 4 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 15 20012055 76793985 7 13 268 1 1 2 3 6 0.67 0 14 0 0 14 5 7 15 5 7 72.15 83.88 11.34 0 2 8 Whitelist OV-AU 0.99 0.01 0 0 0.74 1 Low confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 20 0.04 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 16 71818887 71934124 2 2 268 0 0 1 1 0 0.57 0.26 1 0 0 NA NA NA 9 3 6 72.15 70.08 29.87 0 2 NA Whitelist OV-AU 0.68 0.5 0 0 0.64 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 4 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 17 29625984 74305104 1 10 268 2 0 0 0 8 0.11 0.09 6 0 0 6 0 3 11 4 4 72.15 46.77 48.8 0 4 1 Whitelist OV-AU 15_7 0.62 0.24 0 0 0.48 1 Linked to low confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 12 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 18 28610381 75604210 2 2 268 1 1 0 0 0 0.57 0.85 2 0 0 NA NA NA 6 4 4 72.15 99.96 0 0 2 3 Whitelist OV-AU 0.68 0.98 0 0 0.64 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 4 0.01 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 19 2387150 45063360 1 5 268 4 0 0 0 1 0.01 0.12 8 0 0 8 4 6 11 4 8 72.15 90.31 8.19 0 2 4 Whitelist OV-AU 0.45 0.3 0 0 0.16 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 9 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 20 30157764 36673242 1 1 268 0 1 0 0 0 0.39 0.83 4 0 0 4 3 4 7 3 5 72.15 99.77 0 0 6 4 Whitelist OV-AU 0.62 0.97 0 0 0.59 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 2 0 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 21 32309394 32395438 1 1 268 0 1 0 0 0 0.39 0.58 2 0 NA NA NA NA 4 3 3 72.15 61.34 16.01 0 6 8 Whitelist OV-AU 0.62 0.8 0 NA 0.59 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 2 0 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 22 18980357 42744803 4 8 268 1 0 2 1 4 0.57 0 7 0 0 7 4 4 11 4 4 72.15 8.01 91.99 0 2 4 Whitelist OV-AU 15 0.62 0 0 0 0.64 1 Linked to low confidence OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA With other complex events 12 0.02 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-155 X NA NA 0 0 268 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 21 21 21 0 0 0 0 0 0 Whitelist OV-AU NA 1 0 NA NA 1 No OV-AU AOCS-155 OV 0.81 3.71 Ovary-AdenoCA NA 0 0 NA 4 OV-AU DO46556 AOCS-155 female alive C48.2 69 2826 2826 NA Included Ovary-AdenoCA OV AU 1 92.96 OV-AU::AOCS-157 1 1033639 246801987 1 5 77 4 1 0 0 0 0.04 1 11 0 0 11 5 11 13 5 5 32.86 1.03 98.97 0 2 1 Whitelist OV-AU 0.45 1 0 0 0.36 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 10 0.06 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 2 139610766 139649072 1 1 77 0 1 0 0 0 0.39 0.41 2 NA NA NA NA NA 4 3 3 32.86 22.84 77.06 0 2 3 Whitelist OV-AU 0.62 0.66 NA NA 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 3 19949945 168923526 1 7 77 3 3 0 0 1 0.11 0.5 11 0 0 11 5 11 12 5 5 32.86 35.59 64.29 0 2 1 Whitelist OV-AU 0.54 0.74 0 0 0.48 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 13 0.08 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 4 105310 189984015 1 6 77 2 2 0 0 2 0.26 0.17 6 0 0 6 4 6 7 4 4 32.86 95.18 4.56 0 2 1 Whitelist OV-AU 0.62 0.39 0 0 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 10 0.06 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 5 51720502 96690149 1 4 77 1 1 0 0 2 0.57 0.81 1 0 0 NA NA NA NA NA NA 32.86 0 99.88 8 2 NA Whitelist OV-AU 0.62 0.96 0 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 6 0.04 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 6 13325491 39263163 1 3 77 0 1 1 0 1 0.57 1 3 0 0 NA NA NA 6 0 3 32.86 95.67 4.15 0 1 2 Whitelist OV-AU 0.62 1 0 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 5 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 7 33190167 111914019 1 5 77 3 2 0 0 0 0.14 0.31 10 0 0 10 5 10 12 5 5 32.86 4.86 94.92 0 2 1 Whitelist OV-AU 0.62 0.56 0 0 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 10 0.06 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 8 128634500 128845784 2 2 77 1 0 0 1 0 0.57 0.11 4 0 0 4 0 4 11 4 5 32.86 41.33 55.02 0 3 2 Whitelist OV-AU 0.68 0.29 0 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 9 12240974 12266857 2 2 77 0 0 1 1 0 0.57 0.23 2 0.06 0 NA NA NA 8 5 5 32.86 45.94 53.36 0 2 3 Whitelist OV-AU 0.68 0.46 0.06 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 10 33327074 79419014 1 2 77 0 2 0 0 0 0.11 0.59 1 NA 0 NA NA NA NA NA NA 32.86 0 99.82 0 2 NA Whitelist OV-AU 0.54 0.81 NA 0 0.48 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 11 47240766 131134753 1 5 77 2 3 0 0 0 0.14 0.41 6 0 0 6 3 6 8 3 3 32.86 30.55 68.9 0 2 3 Whitelist OV-AU 0.62 0.66 0 0 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 10 0.06 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 12 99538656 122629545 1 2 77 2 0 0 0 0 0.11 0.18 3 0 0 NA NA NA 6 3 3 32.86 25.91 70.35 0 2 1 Whitelist OV-AU 0.54 0.39 0 0 0.48 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 13 54451951 54525928 1 1 77 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.86 0.06 99.94 0 1 2 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 14 40359470 105561362 1 3 77 1 1 0 0 1 0.57 0.74 3 NA 0 NA NA NA 4 3 3 32.86 2.94 96.14 0 1 2 Whitelist OV-AU 0.87 0.91 NA 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 5 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 15 71768874 71876780 1 1 77 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 32.86 99.89 0.11 0 1 2 Whitelist OV-AU 0.62 0.9 NA NA 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 16 3212055 68828989 1 4 77 2 0 1 0 1 0.3 0.15 3 0 0 NA NA NA 4 4 4 32.86 28.05 71.81 0 1 2 Whitelist OV-AU 0.68 0.35 0 0 0.59 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 7 0.05 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 17 29501559 79032964 1 2 77 0 2 0 0 0 0.11 0.16 4 0 0 4 4 4 6 6 6 32.86 78.37 21.62 0 1 2 Whitelist OV-AU 0.54 0.36 0 0 0.48 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 18 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 19 38270874 38285552 2 2 77 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 10 4 4 32.86 30.31 62.12 2 2 NA Whitelist OV-AU 0.68 0.02 0 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 20 20349863 60769081 1 2 77 1 1 0 0 0 0.57 0.03 4 0.23 0 4 4 4 8 5 5 32.86 8.87 84.06 0 1 2 Whitelist OV-AU 0.68 0.1 0.23 0 0.64 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 4 0.03 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 21 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 22 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-157 X NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-157 OV 0.89 1.76 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7577534_-_C,CN:2 2 OV-AU DO46560 AOCS-157 female deceased C48.2 45 286 286 NA Included Ovary-AdenoCA OV AU 1 9.41 OV-AU::AOCS-158 1 223450121 247609598 3 3 236 2 1 0 0 0 0.3 0.12 4 0 0 4 3 4 21 15 15 37.98 6.53 93.47 0 2 1 Whitelist OV-AU 0.62 0.3 0 0 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 2 43480893 231285175 1 12 236 5 4 0 0 3 0.03 0.35 20 0 0 20 7 8 21 7 7 37.98 5.15 94.75 0 2 1 Whitelist OV-AU 0.45 0.6 0 0 0.33 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 21 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 3 66020964 179793290 1 8 236 0 4 0 0 4 0.01 0.9 7 0 0 7 6 7 8 7 7 37.98 27.17 72.8 0 2 3 Whitelist OV-AU 0.28 1 0 0 0.16 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 4 104077968 140846195 1 2 236 0 2 0 0 0 0.11 0.09 3 0 0 NA NA NA 7 7 7 37.98 87.95 9.49 0 1 2 Whitelist OV-AU 0.54 0.25 0 0 0.48 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 5 38656339 171750553 1 8 236 1 5 0 0 2 0.01 0.79 13 0 0 13 6 13 14 7 7 37.98 43.23 56.68 0 3 2 Whitelist OV-AU 0.41 0.94 0 0 0.19 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 6 101441137 121882141 2 2 236 1 1 0 0 0 0.57 0.13 2 0 0 NA NA NA 9 4 6 37.98 84.17 15.56 0 3 4 Whitelist OV-AU 0.68 0.32 0 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 7 55365277 130462552 1 5 236 1 3 0 0 1 0.11 0.47 5 0 0 5 3 4 7 3 3 37.98 45.4 54.37 0 2 1 Whitelist OV-AU 0.62 0.71 0 0 0.48 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 8 111765765 111776413 2 2 236 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 16 5 5 37.98 43.18 52.98 0 2 NA Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 9 20638061 94837159 1 3 236 1 1 0 0 1 0.57 0.87 7 0 0 7 5 7 10 5 5 37.98 23.29 76.58 0 2 3 Whitelist OV-AU 0.62 1 0 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 10 96867673 110786969 2 2 236 0 0 1 1 0 0.57 0 6 0 0 6 4 6 21 13 13 37.98 40.32 59.51 0 2 3 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 11 6611182 87831843 1 8 236 1 4 0 0 3 0.04 0.53 7 0 0 7 5 7 12 6 6 37.98 62.12 37.3 0 2 1 Whitelist OV-AU 0.62 0.76 0 0 0.36 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 12 10149687 120880270 1 9 236 2 6 0 1 0 0.03 0.54 11 0 0 11 4 11 13 4 4 37.98 6.62 93.3 0 2 3 Whitelist OV-AU 0.41 0.77 0 0 0.33 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 13 NA NA 0 0 236 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.03 NA NA NA 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 14 74212555 74243785 1 1 236 0 1 0 0 0 0.39 0.13 2 0 NA NA NA NA NA NA NA 37.98 0.03 99.06 0 2 3 Whitelist OV-AU 0.62 0.32 0 NA 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 15 33201398 33214267 1 1 236 0 1 0 0 0 0.39 0.69 2 0 NA NA NA NA 8 5 5 37.98 48.17 51.68 0 2 3 Whitelist OV-AU 0.62 0.89 0 NA 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 16 23501949 53329688 1 6 236 1 2 0 0 3 0.3 0.01 7 0 0 7 3 7 12 4 4 37.98 47.39 51.75 0 2 1 Whitelist OV-AU 0.93 0.06 0 0 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 17 33625499 33638801 1 1 236 0 1 0 0 0 0.39 0.84 2 0 NA NA NA NA 6 4 4 37.98 50.09 49.9 0 1 2 Whitelist OV-AU 0.62 0.98 0 NA 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 18 47378637 47391998 1 1 236 0 1 0 0 0 0.39 0.84 2 0.02 NA NA NA NA 6 4 4 37.98 68.3 31.66 0 1 2 Whitelist OV-AU 0.62 0.98 0.02 NA 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 19 10375674 52713482 1 2 236 1 1 0 0 0 0.57 0.81 1 0.07 0 NA NA NA NA NA NA 37.98 16.18 83.64 0 2 NA Whitelist OV-AU 0.68 0.96 0.07 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 20 NA NA 0 0 236 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist OV-AU NA 0.03 0 NA NA 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 21 10798465 26266580 1 2 236 1 1 0 0 0 0.57 0.77 4 0 0 4 3 4 5 4 4 37.98 64.7 5.8 0 2 1 Whitelist OV-AU 0.68 0.93 0 0 0.64 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 22 28690245 28701862 1 1 236 0 1 0 0 0 0.39 0.76 1 NA NA NA NA NA NA NA NA 37.98 49.55 50.45 0 1 NA Whitelist OV-AU 0.62 0.93 NA NA 0.59 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-158 X 95483495 133003304 1 4 236 0 4 0 0 0 0.01 0.76 6 0 0 6 3 6 9 4 5 37.98 37.77 58.78 0 2 3 Whitelist OV-AU 0.21 0.93 0 0 0.16 0 No OV-AU AOCS-158 OV 0.94 1.82 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 3 OV-AU DO46561 AOCS-158 female deceased C48.2 52 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-159 1 24890645 208457264 3 9 259 1 0 1 1 6 0.8 0.42 21 0 0 21 4 6 29 4 6 76.73 91.69 8.31 0 4 5 Whitelist OV-AU 2_12 0.62 0.67 0 0 0.84 1 Linked to high confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA With other complex events 12 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 2 47177454 213497056 1 7 259 2 2 0 1 2 0.53 0 6 0 0 6 6 6 7 7 7 76.73 99.89 0 0 3 4 Whitelist OV-AU 0.96 0 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 3 44328688 183930450 1 7 259 1 3 0 0 3 0.11 0.03 11 0 0 11 4 7 12 5 5 76.73 99.75 0.13 0 4 3 Whitelist OV-AU 22 0.62 0.1 0 0 0.48 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 4 84244517 185820952 5 6 259 1 0 2 2 1 0.53 0.9 14 0 0 14 5 7 20 5 10 76.73 78.84 21.15 0 3 4 Whitelist OV-AU 0.62 1 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 5 138654257 152008186 1 3 259 2 1 0 0 0 0.3 0 6 0 0 6 3 6 8 3 3 76.73 99.87 0.01 0 2 3 Whitelist OV-AU 0.62 0.01 0 0 0.59 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 6 26031629 112093253 1 4 259 1 1 0 0 2 0.57 0.69 8 0 0 8 3 5 17 4 4 76.73 90.07 9.77 0 3 1 Whitelist OV-AU 11 1 0.89 0 0 0.64 1 Linked to low confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA With other complex events 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 7 66581838 110075763 1 4 259 0 3 0 0 1 0.03 0.03 8 0 0 8 8 8 11 11 11 76.73 99.78 0 0 3 4 Whitelist OV-AU 0.21 0.1 0 0 0.33 1 Linked to high confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA After polyploidization 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 8 121735379 132126562 2 5 259 0 1 0 1 3 0.57 0.16 6 0 0 6 4 5 12 6 7 76.73 97.89 2.1 0 6 4 Whitelist OV-AU 0.62 0.36 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 9 33912818 140028685 1 4 259 1 2 0 0 1 0.3 0.05 6 0 0 6 3 6 8 3 3 76.73 0.92 98.41 0 2 3 Whitelist OV-AU 0.62 0.17 0 0 0.59 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 10 56579422 119676293 1 3 259 1 2 0 0 0 0.3 0 5 0 0 5 5 5 5 5 5 76.73 99.82 0 0 4 5 Whitelist OV-AU 0.62 0.02 0 0 0.59 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 11 8857856 44579253 17 27 259 3 4 6 4 10 0.77 0 55 0 0 55 6 11 102 6 11 76.73 90.46 5.43 2 5 4 Whitelist OV-AU 18 0.62 0 0 0 0.84 1 Low confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA With other complex events 44 0.08 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 12 24836900 124945298 8 13 259 0 0 4 4 5 0.05 0.18 23 0 0 23 12 23 26 15 15 76.73 99.7 0.22 0 4 3 Whitelist OV-AU 7 0.68 0.4 0 0 0.46 1 High confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA With other complex events 21 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 13 59016308 68912026 4 7 259 1 1 0 2 3 0.57 0.01 12 0 0 12 6 11 32 8 18 76.73 44.94 52.28 0 3 2 Whitelist OV-AU 0.68 0.03 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 14 76470197 76588942 2 2 259 1 1 0 0 0 0.57 0.59 4 0 0 4 0 4 13 4 4 76.73 11.52 69.77 0 1 2 Whitelist OV-AU 0.68 0.81 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 15 45195576 78304180 1 5 259 0 5 0 0 0 0 0.57 11 0 0 11 11 11 11 11 11 76.73 99.91 0 0 3 4 Whitelist OV-AU 0.1 0.79 0 0 0.07 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 16 57811415 89376102 1 2 259 1 1 0 0 0 0.57 0.57 2 0 0 NA NA NA 8 3 5 76.73 30.9 63.49 0 2 3 Whitelist OV-AU 0.68 0.79 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 17 10642674 12741724 2 2 259 0 0 1 1 0 0.57 0.7 3 0 0 NA NA NA 13 8 8 76.73 18.2 81.8 0 3 0 Whitelist OV-AU 0.68 0.89 0 0 0.64 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 18 132344 49228552 30 43 259 7 5 8 10 13 0.63 0 69 0 0 69 5 14 70 5 14 76.73 83.96 10.83 0 4 3 Whitelist OV-AU 0.62 0 0 0 0.71 1 Low confidence OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA With other complex events 73 0.14 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 19 10612928 10974259 2 2 259 0 2 0 0 0 0.11 0.18 2 0 0 NA NA NA 14 6 7 76.73 78.89 13.84 0 4 5 Whitelist OV-AU 0.54 0.39 0 0 0.48 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 20 1892107 45788517 1 3 259 2 1 0 0 0 0.3 0.39 4 0.29 0.1 4 4 4 5 5 5 76.73 98.93 0 0 3 4 Whitelist OV-AU 0.62 0.63 0.29 0.1 0.59 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 21 NA NA 0 0 259 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist OV-AU NA 0.01 0 NA NA 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 22 41303636 42863064 1 2 259 0 2 0 0 0 0.11 0.04 4 0 0 4 4 4 7 7 7 76.73 1.69 98.31 0 2 3 Whitelist OV-AU 0.54 0.13 0 0 0.48 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-159 X NA NA 0 0 259 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-159 OV 0.65 2.93 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7579349_C_A;17_7579350_C_A,CN:3 3 OV-AU DO46566 AOCS-159 female deceased C48.2 78 673 673 NA Included Ovary-AdenoCA OV AU 1 22.14 OV-AU::AOCS-160 1 22046232 229652977 3 6 172 1 1 0 1 3 0.8 0.12 12 0 0 12 9 12 18 10 10 35.71 23.38 76.62 0 2 1 Whitelist OV-AU 6 0.68 0.3 0 0 0.84 1 Linked to high confidence OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA Canonical without polyploidization 9 0.03 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 2 5601718 204068090 2 8 172 1 0 2 1 4 0.57 0.21 14 0 0 14 7 14 15 7 7 35.71 1.92 97.97 0 2 1 Whitelist OV-AU 0.62 0.44 0 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 3 32006581 47700329 1 2 172 0 2 0 0 0 0.11 0.45 2 0 0 NA NA NA 7 7 7 35.71 0.56 99.32 0 2 3 Whitelist OV-AU 0.54 0.7 0 0 0.48 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 4 168618609 168654264 1 1 172 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 35.71 99.98 0.02 0 1 2 Whitelist OV-AU 0.62 0 NA NA 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 5 32456976 177666283 1 7 172 2 3 0 0 2 0.14 0.53 8 0 0 8 3 6 9 3 5 35.71 63.91 33.42 0 2 3 Whitelist OV-AU 2 0.62 0.76 0 0 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 6 1616031 23308796 18 18 172 4 6 3 5 0 0.77 0 37 0 0 37 9 22 39 9 18 35.71 94.49 5.24 63 3 2 Whitelist OV-AU 0.87 0 0 0 0.84 1 High confidence OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA With other complex events 36 0.1 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 7 47082649 134704716 1 2 172 1 1 0 0 0 0.57 0.03 3 NA 0 NA NA NA NA NA NA 35.71 0.12 99.65 0 2 3 Whitelist OV-AU 0.68 0.1 NA 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 8 21809233 28759989 2 2 172 0 0 1 1 0 0.57 0.29 1 0 0 NA NA NA 6 4 4 35.71 47.53 52.21 0 2 NA Whitelist OV-AU 0.68 0.54 0 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 9 85453459 104219520 1 2 172 2 0 0 0 0 0.11 0.69 2 0 0 NA NA NA 6 5 5 35.71 97.71 2.14 0 0 1 Whitelist OV-AU 0.54 0.89 0 0 0.48 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 10 9450742 107429246 1 4 172 4 0 0 0 0 0.01 0.36 3 0 0 NA NA NA NA NA NA 35.71 17.67 82.15 0 2 1 Whitelist OV-AU 0.21 0.62 0 0 0.16 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 11 17300799 78656469 1 9 172 3 3 0 0 3 0.11 0 6 0 0 6 3 4 9 4 4 35.71 12.95 86.49 0 3 2 Whitelist OV-AU 0.54 0 0 0 0.48 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 12 61559428 61579199 1 1 172 1 0 0 0 0 0.39 0.28 1 0 NA NA NA NA NA NA NA 35.71 6.7 93.2 0 2 NA Whitelist OV-AU 0.62 0.52 0 NA 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 13 71110180 102988285 1 2 172 0 2 0 0 0 0.11 0.53 5 0 0 5 5 5 6 6 6 35.71 21.49 78.35 0 3 2 Whitelist OV-AU 0.54 0.76 0 0 0.48 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 14 50241366 102804879 1 10 172 1 4 0 0 5 0.04 0.02 2 0 0 NA NA NA 5 5 5 35.71 2.44 93.85 0 2 3 Whitelist OV-AU 1 0.62 0.1 0 0 0.36 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 15 59509719 59589157 1 1 172 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 35.71 0 99.9 0 2 NA Whitelist OV-AU 0.62 0.49 NA NA 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 16 3415858 70703869 1 6 172 2 1 0 0 3 0.3 0.47 3 0 0 NA NA NA NA NA NA 35.71 37.71 62.2 0 1 2 Whitelist OV-AU 0.68 0.72 0 0 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 17 29325380 29536502 2 2 172 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA 6 4 4 35.71 49.83 50.17 0 1 NA Whitelist OV-AU 0.68 0.11 0 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 18 3587258 49276781 1 4 172 1 1 0 0 2 0.57 0.81 4 0.02 0 4 3 4 5 3 3 35.71 0.1 99.87 0 2 1 Whitelist OV-AU 2 0.68 0.96 0.02 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 19 12755859 42110921 1 5 172 2 2 0 0 1 0.26 0.01 7 0 0 7 3 3 9 3 3 35.71 29.43 70.4 0 2 3 Whitelist OV-AU 0.68 0.04 0 0 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 20 2458056 3263347 2 2 172 0 2 0 0 0 0.11 0.1 3 0.01 0 NA NA NA 5 0 3 35.71 7.46 91.56 0 3 4 Whitelist OV-AU 0.54 0.27 0.01 0 0.48 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 21 NA NA 0 0 172 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 22 38558992 39208089 1 1 172 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.71 100 0 0 1 NA Whitelist OV-AU 0.62 1 NA NA 0.59 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-160 X 53384509 82462067 1 2 172 0 1 0 1 0 0.57 0.73 3 0 0 NA NA NA 5 3 3 35.71 99.31 0.46 0 1 2 Whitelist OV-AU 0.68 0.9 0 0 0.64 1 No OV-AU AOCS-160 OV 0.85 1.76 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578526_A_C,CN:1 2 OV-AU DO46568 AOCS-160 female deceased C56 66 320 320 NA Included Ovary-AdenoCA OV AU 1 10.53 OV-AU::AOCS-161 1 29128088 113868389 5 6 255 1 2 1 1 1 0.9 0.91 10 0 0 10 10 10 27 10 12 38.08 41.87 55.16 0 2 3 Whitelist OV-AU 0.93 1 0 0 0.92 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 2 10202719 219492308 1 16 255 3 6 0 0 7 0.01 0.91 26 0 0 26 5 7 31 7 7 38.08 35.24 61.76 1 2 3 Whitelist OV-AU 6 0.25 1 0 0 0.21 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 25 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 3 89265022 123848792 2 6 255 0 3 1 0 2 0.11 0 18 0 0 18 5 10 48 11 11 38.08 53.55 43.3 0 6 4 Whitelist OV-AU 0.68 0 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 4 6664189 182735474 1 7 255 4 3 0 0 0 0.06 0.01 8 0 0 8 6 8 9 7 7 38.08 0.33 99.65 0 2 3 Whitelist OV-AU 0.54 0.04 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 5 54714 97004739 1 6 255 1 5 0 0 0 0.01 0.15 12 0 0 12 3 7 15 3 9 38.08 26.42 70.4 0 2 3 Whitelist OV-AU 0.25 0.36 0 0 0.19 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 6 18415203 18711587 3 3 255 0 3 0 0 0 0.03 0.02 4 0 0 4 4 4 35 7 8 38.08 33.61 63.55 0 5 6 Whitelist OV-AU 0.41 0.07 0 0 0.33 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 7 16601295 135832560 1 8 255 0 5 0 0 3 0 0.26 16 0 0 16 9 16 17 10 17 38.08 60.87 36.05 0 2 3 Whitelist OV-AU 6 0.54 0.51 0 0 0.07 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 8 119187386 120254811 2 2 255 0 2 0 0 0 0.11 0.02 4 0 0 4 3 4 14 4 4 38.08 67.14 29.44 0 5 4 Whitelist OV-AU 0.54 0.08 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 9 2057521 140481776 1 12 255 0 7 0 0 5 0 0.33 13 0 0 13 7 13 14 8 8 38.08 1.76 97.68 0 3 2 Whitelist OV-AU 3 0.21 0.58 0 0 0.01 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 10 11969837 123949118 1 20 255 3 9 1 0 7 0 0.01 26 0 0 26 5 14 27 5 14 38.08 75.11 21.54 0 3 4 Whitelist OV-AU 3 0.41 0.03 0 0 0.07 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 33 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 11 9709513 118896136 1 11 255 0 7 0 0 4 0 0.37 15 0 0 15 6 6 18 6 6 38.08 13.44 86.13 0 2 3 Whitelist OV-AU 6 0.02 0.62 0 0 0.01 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 12 52193719 125222799 1 6 255 1 5 0 0 0 0.01 0.46 10 0 0 10 8 10 13 8 8 38.08 1.7 98.15 0 3 2 Whitelist OV-AU 0.25 0.7 0 0 0.19 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 13 33076660 73720415 1 2 255 1 1 0 0 0 0.57 0.01 2 NA 0 NA NA NA NA NA NA 38.08 85.64 0.21 0 2 3 Whitelist OV-AU 0.68 0.06 NA 0 0.64 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 14 23318396 82349714 1 5 255 0 5 0 0 0 0 0.47 12 0 0 12 9 12 15 10 10 38.08 2.23 81.86 0 3 2 Whitelist OV-AU 0.1 0.71 0 0 0.07 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 15 33647623 81190211 1 6 255 1 5 0 0 0 0.01 0.85 5 0 0 5 5 5 5 5 5 38.08 0.44 84.07 0 2 3 Whitelist OV-AU 0.25 0.98 0 0 0.19 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 16 173728 71908606 1 6 255 0 4 1 0 1 0.04 0.85 8 0 0 8 3 5 8 3 3 38.08 55.85 39.21 0 1 2 Whitelist OV-AU 0.25 0.98 0 0 0.36 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 17 4329619 74919880 1 13 255 1 8 0 0 4 0 0 26 0 0 26 5 7 28 5 7 38.08 22.92 75.97 0 2 3 Whitelist OV-AU 11 0.03 0 0 0 0.02 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 18 19554599 31759669 4 8 255 1 2 1 0 4 0.57 0.01 15 0 0 15 4 9 17 4 9 38.08 62.05 37.92 9 4 5 Whitelist OV-AU 0.62 0.03 0 0 0.64 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 19 7695972 42751089 1 6 255 0 3 0 1 2 0.11 0.36 9 0 0 9 5 9 14 7 7 38.08 52.76 39.96 0 3 2 Whitelist OV-AU 0.54 0.61 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 20 23518645 60978352 1 11 255 0 5 2 1 3 0.07 0 20 0 0 20 9 11 28 9 11 38.08 62.27 36.75 0 4 3 Whitelist OV-AU 0.62 0 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 21 34832346 36278424 1 1 255 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA 6 4 4 38.08 48.13 22.16 0 2 3 Whitelist OV-AU 0.62 0.93 NA NA 0.59 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 22 31115701 50197708 2 12 255 0 3 0 1 8 0.11 0 17 0 0 17 4 9 20 4 5 38.08 20.41 54.25 0 2 1 Whitelist OV-AU 6 0.62 0 0 0 0.48 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-161 X 17970199 44158025 1 3 255 0 1 1 1 0 0.8 0 6 0 0 6 3 6 8 4 4 38.08 96.46 0.15 0 2 1 Whitelist OV-AU 0.87 0.01 0 0 0.84 0 No OV-AU AOCS-161 OV 0.68 2.44 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-AU DO46571 AOCS-161 female deceased C48.2 61 243 243 NA Included Ovary-AdenoCA OV AU 1 7.99 OV-AU::AOCS-162 1 62104386 62117010 1 1 172 0 1 0 0 0 0.39 0.26 2 0 NA NA NA NA 19 3 4 69.55 100 0 0 4 6 Whitelist OV-AU 0.62 0.5 0 NA 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 2 141805289 142292733 2 2 172 2 0 0 0 0 0.11 0.27 6 0 0 6 4 6 21 6 6 69.55 99.67 0.22 0 2 3 Whitelist OV-AU 0.54 0.51 0 0 0.48 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 3 13666369 49653327 2 7 172 0 1 0 1 5 0.57 0 5 0 0 5 3 5 33 6 13 69.55 99.98 0 0 4 3 Whitelist OV-AU 15 0.96 0 0 0 0.64 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 9 0.03 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 4 56813790 88275953 1 3 172 1 2 0 0 0 0.3 0.22 6 0 0 6 6 6 7 7 7 69.55 0.34 99.64 0 2 3 Whitelist OV-AU 0.62 0.45 0 0 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 5 60223936 179337860 1 7 172 0 4 0 0 3 0.01 1 14 0 0 14 5 5 18 5 7 69.55 41.23 56.02 0 3 6 Whitelist OV-AU 0.62 1 0 0 0.16 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 11 0.03 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 6 62491159 151817693 1 3 172 0 1 0 2 0 0.3 0.87 10 0 0 10 9 10 19 10 10 69.55 39.3 60.56 0 3 2 Whitelist OV-AU 0.62 1 0 0 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 7 61869912 74070656 3 3 172 0 2 0 1 0 0.3 0.18 4 0 0 4 0 4 9 4 4 69.55 99.54 0.37 0 2 3 Whitelist OV-AU 0.62 0.39 0 0 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 8 84960470 142202378 20 21 172 5 7 3 5 1 0.66 0 45 0 0 45 4 6 57 5 6 69.55 71.51 25.07 15 5 4 Whitelist OV-AU 0.89 0 0 0 0.74 1 Low confidence OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA With other complex events 41 0.12 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 9 10793873 131131492 1 5 172 0 2 0 0 3 0.11 0.33 5 0 0 5 4 5 8 5 5 69.55 93.01 6.32 0 2 3 Whitelist OV-AU 0.62 0.58 0 0 0.48 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 7 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 10 5990733 120327053 1 8 172 1 2 0 0 5 0.3 0.59 15 0 0 15 5 7 15 5 5 69.55 96.44 0.23 0 4 5 Whitelist OV-AU 0.54 0.81 0 0 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 11 0.03 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 11 NA NA 0 0 172 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist OV-AU NA 0.42 NA NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 12 130954887 131110015 2 2 172 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 9 9 9 69.55 99.92 0 0 3 4 Whitelist OV-AU 0.68 1 0 0 0.64 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 13 NA NA 0 0 172 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 14 24001195 69482238 1 4 172 2 0 1 0 1 0.3 1 5 0 0 5 3 5 8 3 3 69.55 99.9 0.1 0 3 2 Whitelist OV-AU 0.68 1 0 0 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 7 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 15 64647931 93510181 1 12 172 0 4 1 0 7 0.04 0 11 0 0 11 6 6 11 6 6 69.55 99.86 0.01 0 3 4 Whitelist OV-AU 0.62 0.01 0 0 0.36 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 17 0.05 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 16 10840054 11030310 1 2 172 0 1 0 0 1 0.39 0.34 2 NA NA NA NA NA NA NA NA 69.55 0.21 99.78 0 2 3 Whitelist OV-AU 0.68 0.59 NA NA 0.59 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 3 0.01 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 17 37733343 74345264 3 3 172 0 1 1 1 0 0.8 0.01 7 0 0 7 5 7 18 5 5 69.55 54.99 39.97 0 3 4 Whitelist OV-AU 0.87 0.04 0 0 0.84 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 18 1605416 20794812 14 15 172 4 4 2 4 1 0.84 0 14 0 0 14 7 7 18 7 7 69.55 78.72 20.98 5 5 4 Whitelist OV-AU 0.85 0 0 0 0.88 1 High confidence OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA With other complex events 29 0.08 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 19 18025693 18418495 2 2 172 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 19 5 5 69.55 64.05 28.68 0 1 3 Whitelist OV-AU 0.68 0 0 0 0.64 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 20 NA NA 0 0 172 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 21 NA NA 0 0 172 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 22 NA NA 0 0 172 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-162 X NA NA 0 0 172 0 0 0 0 0 NA 0.48 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 0.73 0 NA NA 1 No OV-AU AOCS-162 OV 0.79 3.31 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579433_-_G,CN:2 3 OV-AU DO46576 AOCS-162 female alive C56 75 133 133 NA Included Ovary-AdenoCA OV AU 1 4.38 OV-AU::AOCS-163 1 73544541 161423988 1 3 152 1 1 1 0 0 0.8 0.09 7 0 0 7 7 7 24 13 15 78.21 96.97 0 0 5 4 Whitelist OV-AU 0.87 0.26 0 0 0.84 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 2 148243192 149498762 2 2 152 1 1 0 0 0 0.57 0.06 4 0 0 4 4 4 18 9 9 78.21 99.78 0.1 0 3 4 Whitelist OV-AU 0.68 0.17 0 0 0.64 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 3 83328116 84829293 3 3 152 2 1 0 0 0 0.3 0.03 8 0 0 8 4 8 33 8 10 78.21 99.71 0.16 0 2 3 Whitelist OV-AU 0.62 0.1 0 0 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 4 41358634 174275408 1 11 152 2 3 1 0 5 0.34 0.52 16 0 0 16 10 10 17 10 10 78.21 25.37 71.82 0 2 3 Whitelist OV-AU 0.68 0.76 0 0 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 5 16015537 144255628 1 12 152 6 4 0 0 2 0.01 0.4 18 0 0 18 7 18 19 7 7 78.21 99.86 0 0 4 3 Whitelist OV-AU 0.45 0.65 0 0 0.23 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 22 0.07 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 6 1202374 153071947 1 7 152 1 3 1 1 1 0.57 0.86 13 0 0 13 5 8 14 5 5 78.21 99.67 0.18 0 4 3 Whitelist OV-AU 0.77 1 0 0 0.64 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 13 0.04 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 7 14315624 124196774 1 6 152 2 2 0 0 2 0.26 0.59 10 0 0 10 7 10 11 7 7 78.21 92.48 4.97 0 3 2 Whitelist OV-AU 0.62 0.81 0 0 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 8 135759071 136121634 2 2 152 0 0 1 1 0 0.57 0.36 2 0 0 NA NA NA 22 5 11 78.21 96.02 0.45 0 4 5 Whitelist OV-AU 0.68 0.61 0 0 0.64 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 9 100486432 100670271 3 3 152 0 1 1 1 0 0.8 0.2 2 0 0 NA NA NA 23 7 7 78.21 99.33 0 0 3 4 Whitelist OV-AU 0.87 0.43 0 0 0.84 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 10 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 11 28038397 28431822 1 1 152 1 0 0 0 0 0.39 0.85 1 0.01 NA NA NA NA NA NA NA 78.21 99.77 0 0 3 NA Whitelist OV-AU 0.62 0.98 0.01 NA 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 12 47413773 47455991 2 3 152 1 0 0 1 1 0.57 0.02 6 0 0 6 3 4 26 9 9 78.21 96.2 0.13 1 6 7 Whitelist OV-AU 0.62 0.08 0 0 0.64 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 13 55650980 65277402 7 11 152 2 2 1 2 4 0.93 0 13 0 0 13 4 9 22 6 6 78.21 44.11 55.89 0 2 3 Whitelist OV-AU 18 0.98 0 0 0 0.95 0 Low confidence OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA With other complex events 18 0.06 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 14 97011685 97192397 1 1 152 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 78.21 99.09 0 0 3 4 Whitelist OV-AU 0.62 0.26 NA NA 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 15 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 16 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 17 59047657 59173018 1 1 152 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA 11 3 5 78.21 89.09 6.47 0 3 5 Whitelist OV-AU 0.62 0.33 0 NA 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 18 11220437 65546090 1 9 152 0 4 1 0 4 0.04 0.02 9 0 0 9 6 9 10 7 7 78.21 82.15 17.66 0 3 4 Whitelist OV-AU 0.54 0.09 0 0 0.36 0 Linked to low confidence OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA After polyploidization 14 0.05 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 19 3065372 34064630 3 13 152 0 3 2 1 7 0.34 0 23 0 0 23 3 6 25 4 7 78.21 53.23 46.34 0 2 3 Whitelist OV-AU 0.62 0 0 0 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 19 0.06 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 20 16064176 40584582 1 2 152 0 2 0 0 0 0.11 0.57 5 0.02 0 5 0 4 8 4 5 78.21 89.26 9.75 0 3 4 Whitelist OV-AU 0.54 0.8 0.02 0 0.48 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 21 23707266 31474687 1 3 152 2 1 0 0 0 0.3 0.12 6 0 0 6 4 6 9 7 7 78.21 69.92 0.37 0 3 2 Whitelist OV-AU 0.62 0.3 0 0 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 22 32132027 32197210 1 1 152 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 8 3 5 78.21 31.27 68.55 3 0 1 Whitelist OV-AU 0.62 0.01 0 NA 0.59 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-163 X 40399207 125646725 1 5 152 1 4 0 0 0 0.04 1 7 0 0 7 5 7 8 5 5 78.21 8.84 90.93 0 2 3 Whitelist OV-AU 0.45 1 0 0 0.36 0 No OV-AU AOCS-163 OV 0.81 3.24 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577547_T_C,CN:2 3 OV-AU DO46581 AOCS-163 female deceased C56 66 408 408 NA Included Ovary-AdenoCA OV AU 1 13.42 OV-AU::AOCS-164 1 146969337 201727352 3 6 253 2 1 0 0 3 0.3 0.16 10 0 0 10 8 10 25 9 9 44.04 43.8 56.17 0 2 3 Whitelist OV-AU 12 0.93 0.37 0 0 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 9 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 2 116522986 125457756 2 4 253 0 0 1 1 2 0.57 1 1 0 0 NA NA NA 16 6 7 44.04 20.77 79.13 0 2 NA Whitelist OV-AU 1 1 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 3 30985761 194014088 1 8 253 2 5 0 1 0 0.07 0.32 8 0 0 8 4 8 9 4 4 44.04 56.47 43.42 0 3 2 Whitelist OV-AU 0.54 0.57 0 0 0.48 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 16 0.03 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 4 996323 100600815 1 9 253 2 2 1 0 4 0.53 0.61 8 0 0 8 5 8 9 5 5 44.04 56.03 43.95 0 2 1 Whitelist OV-AU 16_7 0.85 0.83 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 14 0.03 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 5 14110082 168286359 1 11 253 2 6 0 0 3 0.01 0.43 14 0 0 14 5 6 18 5 9 44.04 85.14 14.74 0 3 4 Whitelist OV-AU 7 0.62 0.68 0 0 0.16 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 19 0.04 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 6 90940646 114765609 2 4 253 0 1 1 2 0 0.57 1 4 0 0 4 4 4 20 8 8 44.04 60.82 39.04 0 1 2 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 8 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 7 9106180 128954163 1 11 253 2 3 1 0 5 0.34 0 10 0 0 10 5 10 16 5 5 44.04 50.17 49.61 5 2 3 Whitelist OV-AU 12_5 0.87 0.01 0 0 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 17 0.03 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 8 35352452 144225865 1 13 253 4 4 0 0 5 0.05 0.01 21 0 0 21 7 16 24 7 7 44.04 57.9 41.93 0 3 4 Whitelist OV-AU 6 0.18 0.04 0 0 0.46 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 21 0.04 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 9 11637985 94968925 1 6 253 1 1 0 0 4 0.57 0.33 4 0 0 4 3 4 9 3 3 44.04 19.26 80.03 0 2 1 Whitelist OV-AU 0.93 0.58 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 8 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 10 21581029 119444462 1 7 253 2 3 0 0 2 0.14 0.76 7 0 0 7 5 7 7 5 5 44.04 0.38 99.5 0 2 3 Whitelist OV-AU 0.77 0.93 0 0 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 12 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 11 77554265 132504012 2 7 253 1 1 0 0 5 0.57 0.23 8 0 0 8 3 4 12 3 5 44.04 38.82 60.62 0 3 1 Whitelist OV-AU 5 0.77 0.46 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 9 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 12 26944231 128634120 1 12 253 1 6 0 0 5 0 0.07 14 0 0 14 12 14 17 15 15 44.04 5.75 94.17 0 2 3 Whitelist OV-AU 10_7 0.21 0.21 0 0 0.09 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 19 0.04 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 13 43944409 44226136 2 2 253 1 0 1 0 0 0.57 0.6 2 0 0 NA NA NA 7 3 3 44.04 80.71 19.29 0 1 3 Whitelist OV-AU 0.68 0.82 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 14 53613826 62605409 2 3 253 1 0 1 0 1 0.57 0 2 0 0 NA NA NA 5 3 3 44.04 44.94 54.14 0 1 2 Whitelist OV-AU 0.87 0.02 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 5 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 15 43749898 86975240 1 2 253 1 1 0 0 0 0.57 0.57 3 0 0 NA NA NA 4 4 4 44.04 8.35 91.56 0 2 3 Whitelist OV-AU 0.68 0.79 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 16 12967647 50352721 1 3 253 1 2 0 0 0 0.3 0.33 7 0 0 7 5 7 8 5 8 44.04 67.33 32.62 0 3 1 Whitelist OV-AU 0.62 0.58 0 0 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 17 17212817 19737549 2 2 253 0 0 1 1 0 0.57 0.24 4 0 0 4 4 4 14 8 8 44.04 75.28 23.73 0 1 2 Whitelist OV-AU 0.68 0.48 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 4 0.01 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 18 60677392 60733116 1 1 253 0 1 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 44.04 76.53 18.82 0 1 NA Whitelist OV-AU 0.62 0.39 NA NA 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 19 1160679 53892426 1 5 253 0 1 1 1 2 0.8 0.17 12 0 0 12 3 5 15 4 5 44.04 83.64 9.09 0 1 3 Whitelist OV-AU 0.68 0.38 0 0 0.84 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 8 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 20 62157509 62191758 1 1 253 0 1 0 0 0 0.39 0.67 1 0 NA NA NA NA NA NA NA 44.04 16.63 82.38 0 2 NA Whitelist OV-AU 0.62 0.87 0 NA 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 21 16614546 16945877 1 1 253 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 44.04 0.69 76.66 0 2 3 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 22 17983572 47534923 1 7 253 1 0 0 1 5 0.57 0 3 0 0 NA NA NA 4 4 4 44.04 56 44 0 1 2 Whitelist OV-AU 0.77 0.01 0 0 0.64 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 9 0.02 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-164 X 8248962 8259728 1 1 253 0 1 0 0 0 0.39 0.2 2 0 NA NA NA NA 10 6 6 44.04 46.45 53.32 0 1 2 Whitelist OV-AU 0.62 0.42 0 NA 0.59 0 No OV-AU AOCS-164 OV 0.95 1.98 Ovary-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:1 2 OV-AU DO46586 AOCS-164 female deceased C56 55 1019 1019 NA Included Ovary-AdenoCA OV AU 1 33.52 OV-AU::AOCS-165 1 118501451 234315805 1 6 139 3 2 0 0 1 0.14 0.88 12 0 0 12 5 6 17 6 11 55.59 89.36 7.57 0 4 3 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 11 0.04 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 2 236599945 240579559 4 4 139 1 1 1 1 0 1 0.36 1 0 0 NA NA NA 7 6 6 55.59 97.28 2.63 0 2 NA Whitelist OV-AU 1 0.61 0 0 1 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 8 0.03 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 3 167006586 176830872 3 4 139 0 2 0 1 1 0.3 0.01 9 0 0 9 0 3 25 4 4 55.59 48.69 48.14 0 3 4 Whitelist OV-AU 0.54 0.05 0 0 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 7 0.03 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 4 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 5 56289678 56503515 6 6 139 2 1 2 1 0 0.88 0.86 4 0 0 4 4 4 9 5 5 55.59 25.53 71.8 0 1 2 Whitelist OV-AU 0.93 0.99 0 0 0.91 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 12 0.04 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 6 26084560 26272587 3 3 139 3 0 0 0 0 0.03 0 5 0 0 5 3 5 32 6 8 55.59 78.55 18.48 1 1 2 Whitelist OV-AU 0.41 0 0 0 0.33 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 7 50072843 157174408 1 3 139 2 1 0 0 0 0.3 0.26 6 0 0 6 3 6 7 3 3 55.59 99.72 0.05 0 3 2 Whitelist OV-AU 0.62 0.5 0 0 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 6 0.02 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 8 84823719 131403717 4 4 139 2 0 1 1 0 0.57 0 6 0 0 6 0 4 20 3 4 55.59 61.41 38.58 17 2 4 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 8 0.03 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 9 NA NA 0 0 139 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.4 NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 10 52480661 52590495 1 1 139 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 5 3 3 55.59 99.75 0.08 0 2 3 Whitelist OV-AU 0.62 0.98 0 NA 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 11 23995513 46394638 1 2 139 2 0 0 0 0 0.11 0.42 4 0 0 4 4 4 9 5 5 55.59 32.59 66.98 0 1 2 Whitelist OV-AU 0.54 0.67 0 0 0.48 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 12 65004648 123702314 4 6 139 1 1 2 0 2 0.57 0 13 0 0 13 8 13 25 11 11 55.59 96.22 0 0 3 4 Whitelist OV-AU 0.93 0 0 0 0.64 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 10 0.04 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 13 NA NA 0 0 139 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.26 NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 14 19604341 88983975 1 10 139 5 0 0 1 4 0.01 0 17 0 0 17 5 12 19 5 5 55.59 56.09 28 0 2 3 Whitelist OV-AU 0.54 0.02 0 0 0.19 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 16 0.06 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 15 88584408 88882227 1 1 139 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 55.59 0.29 99.71 0 1 2 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 16 NA NA 0 0 139 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.94 NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 17 27084152 56790165 1 6 139 1 1 1 1 2 1 0 13 0 0 13 3 4 20 4 4 55.59 51.39 48.6 0 3 2 Whitelist OV-AU 0.93 0.01 0 0 1 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 10 0.04 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 18 NA NA 0 0 139 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 19 2469654 2490692 1 1 139 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 55.59 9.96 82.77 0 2 3 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 20 18301269 22475838 1 1 139 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA 4 4 4 55.59 54.32 38.52 0 2 NA Whitelist OV-AU 0.62 0.77 NA NA 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 21 NA NA 0 0 139 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.25 NA NA NA 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 22 21386595 21418690 1 1 139 0 0 1 0 0 0.39 0.03 1 0 NA NA NA NA 6 3 3 55.59 95.51 4.49 0 3 NA Whitelist OV-AU 0.62 0.1 0 NA 0.59 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-165 X 17722170 90634719 1 2 139 1 1 0 0 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 55.59 99.77 0 0 1 NA Whitelist OV-AU 0.68 0.16 NA 0 0.64 0 No OV-AU AOCS-165 OV 0.79 2.71 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7574012_-_C,CN:2 3 OV-AU DO46588 AOCS-165 female deceased C56 74 438 438 NA Included Ovary-AdenoCA OV AU 1 14.41 OV-AU::AOCS-166 1 153869668 245318697 1 5 170 0 5 0 0 0 0 0.08 10 0 0 10 10 10 12 11 11 80.96 100 0 1 4 5 Whitelist OV-AU 0.1 0.24 0 0 0.07 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 2 15064159 238366248 1 13 170 5 5 0 1 2 0.06 0.78 21 0 0 21 6 7 22 6 7 80.96 99.9 0 5 5 4 Whitelist OV-AU 0.54 0.94 0 0 0.48 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 24 0.07 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 3 107382169 107847850 5 5 170 1 1 2 1 0 0.9 0.55 7 0 0 7 5 7 18 5 7 80.96 99.97 0 0 6 4 Whitelist OV-AU 0.93 0.77 0 0 0.92 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 4 44044367 170294430 1 7 170 2 3 0 0 2 0.14 0.36 11 0 0 11 5 11 12 5 5 80.96 99.78 0 2 4 3 Whitelist OV-AU 0.54 0.61 0 0 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 5 96347477 155635869 1 2 170 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 6 4 4 80.96 96.88 0.45 0 3 2 Whitelist OV-AU 0.68 0.05 NA 0 0.64 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 6 161845643 164037825 1 2 170 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 8 5 8 80.96 63.36 33.8 2 3 4 Whitelist OV-AU 0.54 0.02 NA 0 0.48 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 7 69074265 110263363 1 5 170 4 1 0 0 0 0.04 1 5 0 0 5 3 5 7 3 3 80.96 99.78 0 1 4 3 Whitelist OV-AU 0.45 1 0 0 0.36 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 8 74259283 74471898 2 4 170 0 1 0 1 2 0.57 0.86 1 0 0 NA NA NA 8 8 8 80.96 99.99 0 0 4 NA Whitelist OV-AU 1 0.99 0 0 0.64 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 9 123816138 124087976 1 1 170 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 3 80.96 23.91 75.42 0 1 2 Whitelist OV-AU 0.62 0.21 NA NA 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 10 5324829 74147165 1 5 170 0 4 0 1 0 0.04 1 12 0 0 12 8 10 13 8 10 80.96 96.6 0 0 4 3 Whitelist OV-AU 0.45 1 0 0 0.36 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 11 51511577 100600949 1 3 170 1 1 0 1 0 0.8 1 10 0 0 10 4 10 13 4 11 80.96 63.28 33.05 0 3 4 Whitelist OV-AU 0.87 1 0 0 0.84 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 12 89432811 130838541 15 19 170 3 1 6 5 4 0.27 0 13 0 0 13 3 11 14 3 6 80.96 96.26 0 0 4 5 Whitelist OV-AU 0.62 0 0 0 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 34 0.1 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 13 60010131 60082270 1 1 170 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 80.96 99.94 0.06 0 2 4 Whitelist OV-AU 0.62 0.12 NA NA 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 14 50710084 69086062 1 2 170 0 2 0 0 0 0.11 0.82 4 0 0 4 0 4 8 4 8 80.96 90.2 8.88 0 2 3 Whitelist OV-AU 0.54 0.96 0 0 0.48 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 15 42506240 42605822 1 1 170 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 80.96 0.1 99.76 0 2 3 Whitelist OV-AU 0.62 0.59 NA NA 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 16 88995692 89007718 1 1 170 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 80.96 0 99.89 0 2 NA Whitelist OV-AU 0.62 0.26 NA NA 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 17 43285733 45945906 1 2 170 1 0 1 0 0 0.57 0.64 4 0 0 4 3 4 5 3 3 80.96 99.97 0.03 0 3 2 Whitelist OV-AU 0.68 0.85 0 0 0.64 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 18 57446866 57808619 1 1 170 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 80.96 99.96 0 0 3 5 Whitelist OV-AU 0.62 0.26 NA NA 0.59 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 19 30372587 30505246 4 4 170 1 0 3 0 0 0.11 0 1 0 0 NA NA NA 30 4 6 80.96 52.8 39.93 0 4 NA Whitelist OV-AU 0.54 0 0 0 0.48 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 20 36719514 37419565 2 2 170 0 2 0 0 0 0.11 0 7 0 0 7 3 5 18 3 5 80.96 92.02 0 0 9 10 Whitelist OV-AU 0.54 0 0 0 0.48 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 21 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 22 36538809 49089280 14 14 170 6 5 1 2 0 0.18 0 18 0 0 18 8 16 24 8 13 80.96 85.59 14.41 0 2 3 Whitelist OV-AU 0.62 0 0 0 0.59 1 High confidence OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA With other complex events 28 0.08 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-166 X 23675601 77238698 1 4 170 1 2 0 1 0 0.57 0.29 9 0 0 9 3 7 9 3 3 80.96 96.4 0.21 0 3 2 Whitelist OV-AU 0.68 0.53 0 0 0.64 1 No OV-AU AOCS-166 OV 0.77 3.46 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578427_G_T,CN:3 4 OV-AU DO46591 AOCS-166 female deceased C56 58 195 195 NA Included Ovary-AdenoCA OV AU 1 6.41 OV-AU::AOCS-167 1 81903189 235162240 1 9 181 5 0 0 0 4 0 0.07 11 0 0 11 11 11 12 12 12 37.38 12.81 87.19 0 2 1 Whitelist OV-AU 0.12 0.21 0 0 0.07 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 14 0.04 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 2 36123706 43450048 1 2 181 1 1 0 0 0 0.57 0.89 4 0 0 4 3 4 6 4 4 37.38 5.54 94.37 0 2 1 Whitelist OV-AU 0.68 1 0 0 0.64 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 3 112816350 172541407 3 3 181 0 1 1 1 0 0.8 0.31 10 0 0 10 10 10 12 11 11 37.38 34.24 65.64 0 2 3 Whitelist OV-AU 0.87 0.56 0 0 0.84 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 4 72992834 117678592 1 1 181 1 0 0 0 0 0.39 0.18 2 0 0 NA NA NA 4 3 3 37.38 36.19 63.79 0 1 2 Whitelist OV-AU 0.62 0.39 0 0 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 5 19308178 178938519 1 7 181 2 0 1 0 4 0.3 0.54 9 0 0 9 4 9 12 4 4 37.38 67.4 29.59 0 3 2 Whitelist OV-AU 0.62 0.77 0 0 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 10 0.03 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 6 5064257 150737590 1 6 181 1 2 0 0 3 0.3 0.88 5 0 0 5 3 5 6 3 3 37.38 67.94 31.88 0 1 0 Whitelist OV-AU 0.62 1 0 0 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 9 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 7 86029477 103162209 1 6 181 1 0 0 1 4 0.57 0.1 4 0 0 4 3 4 7 4 4 37.38 38.56 61.22 0 2 1 Whitelist OV-AU 0.62 0.26 0 0 0.64 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 8 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 8 86385670 107841824 2 3 181 0 0 1 1 1 0.57 0.73 2 0 0 NA NA NA 5 3 3 37.38 36.93 59.53 0 2 3 Whitelist OV-AU 0.87 0.91 0 0 0.64 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 5 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 9 71799728 99978103 1 1 181 0 1 0 0 0 0.39 0.25 2 0 0 NA NA NA 7 7 7 37.38 19.48 80.35 0 1 2 Whitelist OV-AU 0.62 0.49 0 0 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 10 88831354 121974146 1 3 181 2 0 0 0 1 0.11 0.37 9 0 0 9 9 9 9 9 9 37.38 12.58 87.24 0 2 1 Whitelist OV-AU 0.62 0.62 0 0 0.48 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 5 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 11 19996782 71231748 1 4 181 2 1 0 0 1 0.3 0.59 5 0 0 5 3 5 6 3 3 37.38 19.11 80.46 0 2 1 Whitelist OV-AU 0.62 0.81 0 0 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 7 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 12 NA NA 0 0 181 0 0 0 0 0 NA 0.48 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-AU NA 0.73 0 NA NA 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 13 49037409 79169368 3 3 181 1 1 1 0 0 0.8 0.06 1 0 0 NA NA NA 6 3 4 37.38 80.95 19.05 0 1 NA Whitelist OV-AU 0.87 0.19 0 0 0.84 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 14 36857311 90578814 1 3 181 2 0 0 0 1 0.11 1 4 0 0 4 4 4 8 6 6 37.38 40.75 58.34 0 1 2 Whitelist OV-AU 0.62 1 0 0 0.48 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 5 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 15 101763463 101781387 1 1 181 1 0 0 0 0 0.39 0.82 2 0 NA NA NA NA 6 3 3 37.38 9 90.91 0 0 3 Whitelist OV-AU 0.62 0.96 0 NA 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 16 10885040 27735835 1 3 181 2 0 0 0 1 0.11 0 3 0 0 NA NA NA 5 3 4 37.38 47.61 52.07 0 1 2 Whitelist OV-AU 0.62 0.01 0 0 0.48 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 5 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 17 73755505 73781958 1 1 181 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 37.38 75.7 24.27 0 3 NA Whitelist OV-AU 0.62 0.49 NA NA 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 18 3030487 44097469 1 4 181 2 0 0 0 2 0.11 0.82 4 0.1 0 4 4 4 6 6 6 37.38 21.68 78.29 0 1 2 Whitelist OV-AU 0.68 0.96 0.1 0 0.48 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 19 31187963 42170549 1 4 181 1 1 0 0 2 0.57 0.01 6 0 0 6 4 6 8 6 6 37.38 19.04 80.79 0 2 1 Whitelist OV-AU 0.62 0.05 0 0 0.64 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 6 0.02 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 20 NA NA 0 0 181 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 9 4 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.19 0 NA NA 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 21 NA NA 0 0 181 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.91 NA NA NA 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 22 NA NA 0 0 181 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.72 NA NA NA 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-167 X 134039592 134063331 1 1 181 1 0 0 0 0 0.39 0.61 1 0 NA NA NA NA NA NA NA 37.38 99.77 0 0 1 NA Whitelist OV-AU 0.62 0.82 0 NA 0.59 0 No OV-AU AOCS-167 OV 0.81 1.9 Ovary-AdenoCA NA 2 0.01 frameshift_insertion,17_7577099_T_-,CN:1 2 OV-AU DO46593 AOCS-167 female deceased C56 49 937 937 NA Included Ovary-AdenoCA OV AU 1 30.82 OV-AU::AOCS-168 1 162813403 162828139 2 2 91 1 1 0 0 0 0.57 0.24 1 0 0 NA NA NA 7 3 4 64.97 42.44 54.59 0 4 NA Whitelist OV-AU 0.68 0.48 0 0 0.64 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 2 31705970 187766619 1 3 91 1 1 1 0 0 0.8 0.7 5 0 0 5 0 5 6 3 6 64.97 99.89 0 0 4 3 Whitelist OV-AU 0.87 0.9 0 0 0.84 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 3 53184795 197535650 1 6 91 3 0 0 1 2 0.11 0.15 8 0 0 8 3 4 9 3 3 64.97 99.83 0.06 0 7 6 Whitelist OV-AU 0.62 0.35 0 0 0.48 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 4 122666812 165254165 1 3 91 1 0 0 0 2 0.39 1 3 0 0 NA NA NA 4 4 4 64.97 0.03 99.87 0 2 3 Whitelist OV-AU 0.87 1 0 0 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 5 21229196 138647785 1 6 91 4 1 0 0 1 0.04 0.52 9 0 0 9 3 6 10 3 4 64.97 79.59 20.28 1 4 6 Whitelist OV-AU 0.54 0.76 0 0 0.36 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 11 0.06 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 6 132532822 132661000 1 1 91 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 64.97 99.83 0 0 3 NA Whitelist OV-AU 0.62 0.15 NA NA 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 7 110098479 110129592 1 1 91 1 0 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 64.97 99.96 0 0 4 NA Whitelist OV-AU 0.62 0.74 NA NA 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 8 39176773 144680981 1 4 91 2 1 1 0 0 0.57 0.23 1 0 0 NA NA NA 5 3 5 64.97 99.89 0 0 4 NA Whitelist OV-AU 0.68 0.47 0 0 0.64 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 9 27621487 32319188 4 4 91 1 2 1 0 0 0.57 0.17 4 0 0 4 3 4 14 7 8 64.97 28.68 70.62 0 4 2 Whitelist OV-AU 0.68 0.39 0 0 0.64 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 10 52730996 107936183 1 2 91 2 0 0 0 0 0.11 0.8 2 0 0 NA NA NA NA NA NA 64.97 99.82 0 0 3 4 Whitelist OV-AU 0.54 0.95 0 0 0.48 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 11 NA NA 0 0 91 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.33 NA NA NA 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 12 380806 125052050 1 6 91 3 1 0 0 2 0.11 0.01 5 0 0 5 3 5 5 3 3 64.97 99.92 0 0 4 3 Whitelist OV-AU 0.54 0.05 0 0 0.48 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 13 NA NA 0 0 91 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.93 NA NA NA 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 14 69490823 69507304 1 1 91 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 64.97 99.98 0.02 0 2 3 Whitelist OV-AU 0.62 0.63 NA NA 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 15 NA NA 0 0 91 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 16 9061894 73317301 1 3 91 3 0 0 0 0 0.03 0.74 4 0.12 0 4 4 4 5 5 5 64.97 99.9 0 0 1 3 Whitelist OV-AU 0.41 0.91 0.12 0 0.33 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 17 6306063 66426464 6 6 91 1 1 2 2 0 0.88 0.04 13 0 0 13 8 13 15 9 15 64.97 6.48 89.06 0 2 8 Whitelist OV-AU 0.93 0.13 0 0 0.91 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 12 0.07 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 18 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 19 16188693 58361420 1 3 91 2 0 0 0 1 0.11 0.11 4 0 0 4 3 4 6 4 5 64.97 79.61 18.64 0 3 1 Whitelist OV-AU 0.62 0.28 0 0 0.48 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 20 15911224 15964723 1 1 91 1 0 0 0 0 0.39 0.13 1 0 NA NA NA NA 5 5 5 64.97 92.94 0 0 5 NA Whitelist OV-AU 0.62 0.33 0 NA 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 21 NA NA 0 0 91 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 1 NA NA NA 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 22 22261426 22616940 1 1 91 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 64.97 0.69 99.31 0 0 2 Whitelist OV-AU 0.62 1 NA NA 0.59 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-168 X 20400331 70532409 1 4 91 1 1 0 0 2 0.57 0.23 7 0 0 7 3 5 11 6 8 64.97 38.05 58.56 0 2 3 Whitelist OV-AU 1 0.46 0 0 0.64 0 No OV-AU AOCS-168 OV 0.77 3.22 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:2 4 OV-AU DO46597 AOCS-168 female deceased C56 60 393 393 NA Included Ovary-AdenoCA OV AU 1 12.93 OV-AU::AOCS-169 1 94394953 193703467 7 20 413 1 2 3 1 13 0.67 0 32 0 0 32 8 10 88 8 10 40.14 28.8 71.15 0 3 4 Whitelist OV-AU 4 0.62 0 0 0 0.74 1 High confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 27 0.03 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 2 147233428 147305902 3 3 413 2 1 0 0 0 0.3 0.42 2 0 0 NA NA NA 55 12 12 40.14 15.9 84.01 0 1 2 Whitelist OV-AU 0.62 0.67 0 0 0.59 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 3 68970737 174586485 3 7 413 0 6 0 0 1 0 0.77 38 0 0 38 10 23 59 10 11 40.14 36.71 59.87 0 3 2 Whitelist OV-AU 0.02 0.93 0 0 0.03 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 4 67409369 77723304 2 2 413 0 2 0 0 0 0.11 0.01 6 0 0 6 5 6 22 9 9 40.14 87.97 11.62 0 2 3 Whitelist OV-AU 0.54 0.05 0 0 0.48 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA Canonical without polyploidization 4 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 5 389649 170154621 1 23 413 2 19 0 0 2 0 0.61 46 0 0 46 10 10 47 10 10 40.14 57.07 40.17 0 3 2 Whitelist OV-AU 9 0 0.83 0 0 0 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 44 0.05 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 6 133309545 136214832 5 5 413 2 3 0 0 0 0.14 0.04 7 0 0 7 3 3 65 11 11 40.14 35.22 64.64 0 2 3 Whitelist OV-AU 0.62 0.13 0 0 0.59 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 7 148616482 157846964 4 5 413 0 4 0 0 1 0.01 0.66 12 0 0 12 0 5 42 8 9 40.14 34.1 63.21 0 5 6 Whitelist OV-AU 0.1 0.87 0 0 0.16 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 8 87072282 94479769 4 4 413 0 3 0 1 0 0.11 0.37 11 0 0 11 5 7 46 13 13 40.14 43.26 53.12 0 3 2 Whitelist OV-AU 0.54 0.62 0 0 0.48 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 9 12691740 121121973 3 13 413 0 2 2 2 7 0.57 0 34 0 0 34 8 30 52 9 9 40.14 44.39 54.91 0 3 2 Whitelist OV-AU 13_20 0.62 0 0 0 0.64 1 High confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 19 0.02 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 10 56638070 56733737 3 11 413 1 2 0 0 8 0.3 0.08 3 0 0 NA NA NA 27 10 10 40.14 12.86 83.42 0 6 4 Whitelist OV-AU 1_4 0.98 0.22 0 0 0.59 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 14 0.02 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 11 79933797 80144168 2 2 413 0 0 1 1 0 0.57 0.2 4 0 0 4 4 4 56 14 14 40.14 28.49 71.08 0 3 4 Whitelist OV-AU 0.68 0.42 0 0 0.64 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 12 66406829 72185735 2 2 413 0 2 0 0 0 0.11 1 9 0 0 9 3 3 28 7 7 40.14 43.07 56.85 0 6 2 Whitelist OV-AU 0.54 1 0 0 0.48 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 13 23398289 85684636 1 10 413 1 7 0 0 2 0 0.34 16 0 0 16 13 16 17 14 14 40.14 82.43 17.57 0 2 1 Whitelist OV-AU 9 0.06 0.59 0 0 0.04 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA Canonical without polyploidization 18 0.02 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 14 31218161 107120406 1 11 413 1 6 0 0 4 0 0.67 12 0 0 12 6 7 13 6 8 40.14 40.38 59.4 0 3 2 Whitelist OV-AU 9 0.41 0.88 0 0 0.09 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 18 0.02 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 15 59146716 67702240 2 2 413 0 2 0 0 0 0.11 0.18 4 0 0 4 3 4 21 14 14 40.14 13.55 81.67 0 3 2 Whitelist OV-AU 0.54 0.39 0 0 0.48 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 16 14199639 89698150 1 3 413 0 3 0 0 0 0.03 0.01 7 0 0 7 5 5 9 5 5 40.14 55.17 44.01 0 2 1 Whitelist OV-AU 0.41 0.04 0 0 0.33 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 17 50359091 61740614 4 4 413 0 4 0 0 0 0.01 0.88 6 0 0 6 5 6 19 5 5 40.14 71.41 28.59 0 2 3 Whitelist OV-AU 0.21 1 0 0 0.16 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 18 1773232 41269883 1 4 413 0 4 0 0 0 0.01 0.03 8 0 0 8 4 8 9 4 4 40.14 82.94 17.03 0 2 1 Whitelist OV-AU 0.21 0.11 0 0 0.16 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 19 35272211 44034038 2 3 413 0 2 0 0 1 0.11 1 5 0 0 5 4 5 18 5 5 40.14 24.48 67.96 0 3 4 Whitelist OV-AU 0.41 1 0 0 0.48 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 20 4534875 59811573 3 5 413 0 3 0 0 2 0.03 0.3 21 0 0 21 11 18 23 11 11 40.14 23.5 68.13 0 3 2 Whitelist OV-AU 9 0.62 0.55 0 0 0.33 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA With other complex events 8 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 21 NA NA 0 0 413 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA NA NA NA NA 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 22 NA NA 0 0 413 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.27 NA NA NA 1 No OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-169 X 49457763 87881955 3 5 413 0 2 1 0 2 0.3 0.11 11 0 0 11 8 10 40 9 17 40.14 29.08 70.69 0 3 4 Whitelist OV-AU 1 0.93 0.29 0 0 0.59 1 Linked to high confidence OV-AU AOCS-169 OV 0.65 2.07 Ovary-AdenoCA After polyploidization 8 0.01 nonsynonymous_SNV,17_7577518_A_T,CN:4 7 OV-AU DO46602 AOCS-169 female deceased C56 74 205 205 NA Included Ovary-AdenoCA OV AU 1 6.74 OV-AU::AOCS-170 1 58559059 225301156 6 21 773 2 2 1 1 15 0.88 0.01 77 0 0 77 13 31 125 13 16 82.68 95.31 4.69 0 4 6 Whitelist OV-AU 0.84 0.03 0 0 0.91 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 27 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 False positive; manually removed OV-AU::AOCS-170 2 145638253 166271367 6 12 773 1 2 1 2 6 0.88 0.95 24 0 0 24 10 10 101 17 22 82.68 99.9 0 0 4 6 Whitelist OV-AU 0.62 1 0 0 0.91 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 18 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 False positive; manually removed OV-AU::AOCS-170 3 161555375 165808153 11 11 773 3 3 1 4 0 0.63 0.08 9 0 0 9 3 4 94 10 10 82.68 92.23 4.64 0 10 6 Whitelist OV-AU 0.74 0.22 0 0 0.71 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 22 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 4 109555665 114530799 4 4 773 1 2 1 0 0 0.57 0.77 2 0 0 NA NA NA 63 10 10 82.68 79.48 18.15 0 4 6 Whitelist OV-AU 0.68 0.93 0 0 0.64 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 5 14563431 19684747 4 4 773 0 3 1 0 0 0.11 0.23 7 0 0 7 4 5 52 7 11 82.68 74.04 25.84 0 4 6 Whitelist OV-AU 0.54 0.47 0 0 0.48 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 6 30334814 31658962 4 4 773 1 3 0 0 0 0.11 0.11 2 0 0 NA NA NA 97 9 17 82.68 97.01 0 0 6 8 Whitelist OV-AU 0.54 0.29 0 0 0.48 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 7 127969806 131916459 7 7 773 0 6 1 0 0 0 0 15 0 0 15 4 7 108 8 8 82.68 97.28 0 0 9 7 Whitelist OV-AU 0.13 0 0 0 0.09 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 8 95784287 143578108 2 7 773 0 4 0 0 3 0.01 0.57 31 0 0 31 7 8 57 7 8 82.68 96.2 0.2 0 11 4 Whitelist OV-AU 0.62 0.79 0 0 0.16 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 9 130410021 132368284 2 2 773 1 1 0 0 0 0.57 0.23 4 0 0 4 3 4 55 9 10 82.68 95.64 4.18 0 3 0 Whitelist OV-AU 0.68 0.46 0 0 0.64 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 10 29330230 30835796 3 4 773 1 2 0 0 1 0.3 0.93 4 0 0 4 0 3 51 8 9 82.68 88.09 11.74 0 5 4 Whitelist OV-AU 0.68 1 0 0 0.59 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 7 0 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 11 74679489 78374504 4 4 773 0 4 0 0 0 0.01 0 8 0 0 8 4 6 80 7 12 82.68 83.76 15.81 0 6 9 Whitelist OV-AU 0.21 0.01 0 0 0.16 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 12 18986632 111780873 3 8 773 1 3 1 1 2 0.57 0.39 46 0 0 46 7 16 67 9 21 82.68 99.92 0 0 3 5 Whitelist OV-AU 0.87 0.64 0 0 0.64 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 False positive; manually removed OV-AU::AOCS-170 13 26480205 114798981 1 11 773 0 10 1 0 0 0 0.01 22 0 0 22 10 11 25 10 10 82.68 59.47 40.4 0 3 6 Whitelist OV-AU 0 0.03 0 0 0 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 22 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 14 52686475 103375102 2 4 773 1 1 0 0 2 0.57 0.22 9 0 0 9 6 8 26 7 7 82.68 36.48 63.12 0 4 2 Whitelist OV-AU 17 1 0.45 0 0 0.64 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 15 92905679 93872883 8 8 773 1 6 0 1 0 0.01 0.44 8 0 0 8 4 5 35 8 8 82.68 98.37 1.53 0 4 5 Whitelist OV-AU 0.28 0.69 0 0 0.21 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 16 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 16 1456338 84616481 1 15 773 0 13 1 0 1 0 0.26 36 0 0 36 7 12 37 7 13 82.68 76.78 18.7 0 3 4 Whitelist OV-AU 0 0.51 0 0 0 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 29 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 17 26902525 76941457 3 19 773 1 5 0 0 13 0.01 0.03 29 0 0 29 5 9 43 5 6 82.68 74.87 25.11 0 3 6 Whitelist OV-AU 14_2 0.62 0.12 0 0 0.19 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 18 45129553 71349136 2 6 773 0 4 0 0 2 0.01 0.09 16 0 0 16 4 7 25 10 10 82.68 87.6 12.37 0 3 6 Whitelist OV-AU 0.25 0.26 0 0 0.16 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 19 36018931 44347871 4 10 773 1 3 0 0 6 0.11 0 12 0 0 12 3 4 40 4 7 82.68 53.67 38.47 0 6 4 Whitelist OV-AU 0.68 0 0 0 0.48 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 20 14614893 59253631 3 5 773 1 0 1 1 2 0.8 0.26 21 0 0 21 5 7 33 7 16 82.68 58.58 33.84 0 3 4 Whitelist OV-AU 0.68 0.51 0 0 0.84 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 21 44439914 45607482 3 3 773 0 3 0 0 0 0.03 0.51 5 0 0 5 3 4 12 4 6 82.68 52.4 17.15 0 6 4 Whitelist OV-AU 0.41 0.76 0 0 0.33 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 22 40690215 41441606 5 5 773 0 2 2 1 0 0.53 0 5 0 0 5 5 5 40 7 7 82.68 51.48 36.3 0 2 4 Whitelist OV-AU 0.68 0 0 0 0.64 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-170 X 29608651 38628466 4 4 773 0 4 0 0 0 0.01 0.81 10 0 0 10 4 8 69 9 9 82.68 99.55 0.22 0 6 8 Whitelist OV-AU 0.21 0.95 0 0 0.16 0 No OV-AU AOCS-170 OV 0.7 4.27 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:4 5 OV-AU DO46606 AOCS-170 female alive C56 73 804 804 NA Included Ovary-AdenoCA OV AU 1 26.45 OV-AU::AOCS-171 1 15823160 236253633 1 28 258 1 6 1 2 18 0.08 0.01 14 0 0 14 7 11 16 7 7 29.17 38.66 61.33 0 3 4 Whitelist OV-AU 2_9 0.9 0.05 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 38 0.07 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 2 4337054 232030805 1 23 258 2 10 0 0 11 0 0.18 17 0 0 17 17 17 17 17 17 29.17 0.74 99.15 0 2 3 Whitelist OV-AU 1_11_X 0.54 0.39 0 0 0.01 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 35 0.07 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 3 148925479 149142343 2 2 258 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 24 19 23 29.17 8.14 91.72 0 2 3 Whitelist OV-AU 0.68 0.02 0 0 0.64 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 4 104929322 104952822 2 2 258 2 0 0 0 0 0.11 0.04 1 0 0 NA NA NA 5 5 5 29.17 20.66 79.32 0 2 NA Whitelist OV-AU 0.54 0.15 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 5 31321514 31466158 1 1 258 0 1 0 0 0 0.39 0.01 1 0 NA NA NA NA 5 0 4 29.17 58.58 38.74 0 2 NA Whitelist OV-AU 0.62 0.06 0 NA 0.59 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 6 NA NA 0 0 258 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-AU NA 0.1 0 NA NA 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 7 151072085 152449974 12 12 258 4 6 1 1 0 0.11 0 5 0 0 5 0 5 13 3 4 29.17 31.6 68.17 0 4 5 Whitelist OV-AU 0.54 0 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 24 0.05 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 8 9852651 142422526 1 13 258 1 10 0 0 2 0 0.12 22 0 0 22 12 21 25 12 12 29.17 44.67 54.79 0 3 2 Whitelist OV-AU 0.03 0.3 0 0 0 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 24 0.05 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 9 92248132 140455994 1 12 258 3 2 0 0 7 0.14 0.02 9 0 0 9 4 6 17 7 9 29.17 31.08 68.76 0 2 3 Whitelist OV-AU 1 0.62 0.09 0 0 0.59 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 10 97203944 97515701 4 4 258 0 3 1 0 0 0.11 0.02 5 0 0 5 3 5 17 9 9 29.17 1.17 98.65 0 2 3 Whitelist OV-AU 0.54 0.09 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 11 2379890 130069497 1 17 258 1 4 0 0 12 0.04 0 6 0 0 6 5 6 6 5 5 29.17 19.95 79.63 0 2 3 Whitelist OV-AU 2_X 0.62 0.01 0 0 0.36 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 12 111000976 111102182 4 4 258 0 1 1 2 0 0.57 0.37 3 0 0 NA NA NA 12 5 5 29.17 15.58 84.41 0 2 4 Whitelist OV-AU 0.68 0.63 0 0 0.64 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 13 27696469 111290676 1 4 258 0 3 0 1 0 0.11 0.12 4 0 0 4 4 4 5 5 5 29.17 0.99 99.01 0 2 3 Whitelist OV-AU 0.54 0.31 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 14 23221645 100665356 1 5 258 0 4 0 0 1 0.01 0.59 9 0 0 9 7 9 9 7 7 29.17 54.75 44.33 0 2 1 Whitelist OV-AU 0.45 0.81 0 0 0.16 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 15 64298350 81877261 1 2 258 1 1 0 0 0 0.57 0.13 2 NA 0 NA NA NA 4 4 4 29.17 70.67 29.33 0 1 2 Whitelist OV-AU 0.68 0.32 NA 0 0.64 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 16 392072 9047631 2 2 258 1 1 0 0 0 0.57 0.85 3 0 0.11 NA NA NA 9 9 9 29.17 41.21 58.69 0 2 1 Whitelist OV-AU 0.68 0.98 0 0.11 0.64 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 17 29468373 39865846 2 3 258 2 0 0 0 1 0.11 0 2 0 0 NA NA NA 12 4 5 29.17 62.02 37.96 0 1 2 Whitelist OV-AU 0.62 0.02 0 0 0.48 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 18 NA NA 0 0 258 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-AU NA 0.98 0 NA NA 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 19 2693346 4828250 1 1 258 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA 5 3 5 29.17 16.94 82.88 0 1 2 Whitelist OV-AU 0.62 0.62 0 NA 0.59 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 20 2250106 48860578 1 5 258 0 5 0 0 0 0 0.83 3 0 0 NA NA NA NA NA NA 29.17 0.02 99 0 2 3 Whitelist OV-AU 0.1 0.97 0 0 0.07 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 21 NA NA 0 0 258 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-AU NA 0.93 NA NA NA 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 22 20828874 20894375 1 1 258 0 1 0 0 0 0.39 0.56 1 0 NA NA NA NA NA NA NA 29.17 59.52 40.48 0 3 NA Whitelist OV-AU 0.62 0.78 0 NA 0.59 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-AU::AOCS-171 X 13412672 120438678 1 11 258 1 6 0 0 4 0 0.39 4 0 0 4 4 4 5 5 5 29.17 0.81 98.96 0 2 3 Whitelist OV-AU 0.13 0.64 0 0 0.09 0 No OV-AU AOCS-171 OV 0.76 1.87 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 OV-AU DO46611 AOCS-171 female deceased C56 52 734 734 NA Included Ovary-AdenoCA OV AU 1 24.14 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 1 49064386 205747224 7 16 718 4 3 0 0 9 0.06 0.78 47 0 0 47 9 9 82 9 16 71.54 94.47 5.53 0 4 6 Whitelist OV-US 14_7 0.79 0.94 0 0 0.48 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 23 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 False positive; manually removed OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 2 177305877 178391634 6 7 718 0 2 2 2 1 0.57 0.5 7 0 0 7 3 5 97 8 15 71.54 99.91 0 0 6 5 Whitelist OV-US 0.96 0.75 0 0 0.64 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 3 109991062 119545756 6 6 718 0 6 0 0 0 0 0.34 26 0 0 26 4 16 93 7 13 71.54 96.59 0.09 0 3 2 Whitelist OV-US 0.04 0.59 0 0 0.03 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 4 15815350 166446742 2 14 718 0 8 0 0 6 0 0.6 62 0 0 62 9 13 73 9 13 71.54 97.54 0 0 4 3 Whitelist OV-US 0.21 0.82 0 0 0 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 22 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 5 32370239 40782660 6 7 718 0 4 1 1 1 0.11 1 11 0 0 11 4 6 81 14 15 71.54 94.86 5 0 5 6 Whitelist OV-US 0.62 1 0 0 0.48 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 6 35465160 65575307 2 6 718 0 3 0 1 2 0.11 0.1 22 0 0 22 4 6 77 13 26 71.54 49.37 47.33 0 5 3 Whitelist OV-US 0.68 0.26 0 0 0.48 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 7 20257526 69395456 2 4 718 0 4 0 0 0 0.01 0.46 23 0 0 23 6 9 70 6 15 71.54 97.44 0 0 5 3 Whitelist OV-US 0.21 0.7 0 0 0.16 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 8 37741360 43508048 5 5 718 0 5 0 0 0 0 0.15 10 0 0 10 3 5 77 12 15 71.54 96.58 0 0 5 6 Whitelist OV-US 0.1 0.35 0 0 0.07 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 9 1986986 134705327 1 23 718 0 18 1 0 4 0 0.63 39 0 0 39 7 26 40 7 26 71.54 81.13 18.74 0 4 5 Whitelist OV-US 17 0 0.84 0 0 0 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 42 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 10 4932621 32240886 7 10 718 2 5 0 0 3 0.02 0.11 22 0 0 22 5 6 64 9 9 71.54 51.56 48.25 0 6 5 Whitelist OV-US 0.47 0.28 0 0 0.33 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 11 72733227 74487033 2 2 718 0 2 0 0 0 0.11 0.33 3 0 0 NA NA NA 52 9 22 71.54 62.88 36.69 0 4 5 Whitelist OV-US 0.54 0.58 0 0 0.48 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 12 2843128 6516850 6 6 718 2 3 0 1 0 0.34 0.11 3 0 0 NA NA NA 57 7 9 71.54 65.34 34.64 0 4 5 Whitelist OV-US 0.62 0.29 0 0 0.59 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 13 24753200 112130103 12 13 718 4 5 1 2 1 0.34 0.06 36 0 0 36 6 12 37 6 12 71.54 35.25 64.75 10 2 3 Whitelist OV-US 0.62 0.2 0 0 0.59 0 Low confidence OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA With other complex events 25 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 14 20605489 100315052 1 8 718 0 4 0 0 4 0.01 0 8 0 0 8 8 8 11 9 11 71.54 6.89 77.2 0 2 4 Whitelist OV-US 15 0.54 0.01 0 0 0.16 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 15 38181393 63373170 3 9 718 2 0 1 0 6 0.3 0.57 5 0 0 5 5 5 17 5 9 71.54 67.85 32.05 0 2 4 Whitelist OV-US 10_14 0.62 0.8 0 0 0.59 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 16 85687266 87111477 3 3 718 0 1 1 1 0 0.8 0.35 3 0 0 NA NA NA 41 4 8 71.54 72.05 23.49 0 3 4 Whitelist OV-US 0.87 0.61 0 0 0.84 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 17 3533493 74207635 1 14 718 1 11 0 0 2 0 0.36 18 0 0 18 5 6 19 5 6 71.54 15.4 79.34 0 2 4 Whitelist OV-US 9 0 0.61 0 0 0 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 18 1815322 75311633 1 20 718 0 19 0 0 1 0 0.82 40 0 0 40 9 29 41 9 29 71.54 93.83 0 0 4 5 Whitelist OV-US 0 0.96 0 0 0 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 39 0.03 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 19 43695771 47410829 3 3 718 0 1 1 1 0 0.8 0.18 8 0 0 8 3 5 31 6 11 71.54 62.39 36.78 0 4 2 Whitelist OV-US 0.87 0.4 0 0 0.84 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 20 2434200 5508521 2 2 718 0 2 0 0 0 0.11 0.09 4 0 0 4 3 4 41 6 14 71.54 91.72 0 0 5 4 Whitelist OV-US 0.54 0.26 0 0 0.48 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 21 18398041 25095580 1 4 718 0 4 0 0 0 0.01 0.24 9 0 0 9 4 7 12 5 8 71.54 62.64 14.71 0 3 4 Whitelist OV-US 0.21 0.47 0 0 0.16 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 22 46171459 49950650 2 4 718 0 2 1 1 0 0.57 0.22 6 0 0 6 4 4 19 5 6 71.54 20.88 67.4 0 2 3 Whitelist OV-US 0.68 0.46 0 0 0.64 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 OV-US::098acb76-0bf5-44e5-bcae-f919cf5fa5e5 X 4890040 140268120 11 18 718 2 4 1 4 7 0.48 0.2 71 0 0 71 18 19 76 18 19 71.54 48.16 48.45 3 3 2 Whitelist OV-US 0.87 0.42 0 0 0.64 0 No OV-US 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 OV 0.82 3.31 Ovary-AdenoCA NA 29 0.02 nonsynonymous_SNV,17_7577536_C_T,CN:2 7 OV-US DO29850 TCGA-24-1466 098acb76-0bf5-44e5-bcae-f919cf5fa5e5 female deceased C56.9 74 1373 NA NA Included Ovary-AdenoCA OV US 1 45.16 False positive; manually removed OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 1 101268556 235517414 1 6 190 3 0 1 0 2 0.11 0.89 11 0 0 11 6 11 14 6 6 33.48 64.66 35.34 3 3 2 Whitelist OV-US 0.62 1 0 0 0.48 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 2 37647215 208002808 1 11 190 4 2 0 2 3 0.26 0.29 4 0 0 4 4 4 5 5 5 33.48 0.01 99.9 0 1 2 Whitelist OV-US 0.62 0.54 0 0 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 3 5577920 42244887 2 2 190 1 1 0 0 0 0.57 0.2 4 0 0 4 3 4 7 3 3 33.48 8.18 91.7 0 2 1 Whitelist OV-US 0.68 0.42 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 4 15434782 177796005 1 9 190 5 1 0 0 3 0.01 1 10 0 0 10 4 5 10 4 5 33.48 40 59.82 0 1 2 Whitelist OV-US 0.41 1 0 0 0.19 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 5 66641825 177746139 1 7 190 5 0 0 0 2 0 0.66 8 0 0 8 8 8 9 9 9 33.48 29.21 70.67 0 1 2 Whitelist OV-US 0.13 0.86 0 0 0.07 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 6 139713511 147156627 2 4 190 2 1 0 1 0 0.57 0.64 3 0 0 NA NA NA 10 7 7 33.48 15.55 84.31 0 2 1 Whitelist OV-US 0.68 0.86 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 7 7399493 20590370 2 2 190 0 0 1 1 0 0.57 0.75 1 0 0 NA NA NA 5 5 5 33.48 0.04 99.74 0 2 NA Whitelist OV-US 0.68 0.91 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 8 8616739 121588144 1 5 190 4 0 0 0 1 0.01 1 9 0 0 9 8 9 13 8 8 33.48 40.34 55.75 0 1 2 Whitelist OV-US 0.45 1 0 0 0.16 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 9 97396348 97406639 2 2 190 0 0 1 1 0 0.57 0.46 1 0 0 NA NA NA NA NA NA 33.48 72.17 27.13 0 1 NA Whitelist OV-US 0.68 0.7 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 10 78311852 78327409 1 1 190 1 0 0 0 0 0.39 0.23 2 0 NA NA NA NA 7 6 6 33.48 39.11 60.71 0 1 2 Whitelist OV-US 0.62 0.46 0 NA 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 11 8958076 76917839 1 5 190 3 0 1 1 0 0.28 0.86 5 0 0 5 5 5 7 7 7 33.48 0.02 99.56 0 2 1 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 12 22352139 133066933 2 6 190 0 0 1 1 4 0.57 0.01 3 0 0 NA NA NA 4 4 4 33.48 8.5 90.83 3 2 3 Whitelist OV-US 1 0.62 0.04 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 13 30345683 79221212 1 2 190 2 0 0 0 0 0.11 0.69 1 0 0 NA NA NA NA NA NA 33.48 96.03 3.17 0 1 NA Whitelist OV-US 0.54 0.89 0 0 0.48 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 14 22082528 84010934 2 2 190 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 33.48 57.69 41.4 0 1 2 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 15 74285425 74300984 2 2 190 0 0 1 1 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 33.48 5.73 94.27 0 1 NA Whitelist OV-US 0.68 0.5 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 16 NA NA 0 0 190 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.96 0 NA NA 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 17 19391099 19403011 1 1 190 1 0 0 0 0 0.39 0.37 1 0 NA NA NA NA 6 4 4 33.48 70.17 29.81 0 1 NA Whitelist OV-US 0.62 0.62 0 NA 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 18 18673718 18684299 1 1 190 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 33.48 39.04 60.93 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 19 40933623 46683030 1 2 190 1 0 0 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 33.48 36.28 63.55 0 1 2 Whitelist OV-US 0.68 0.01 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 20 11503538 11514942 1 1 190 1 0 0 0 0 0.39 0.13 1 0 NA NA NA NA NA NA NA 33.48 11.33 87.7 0 2 NA Whitelist OV-US 0.62 0.33 0 NA 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 21 NA NA 0 0 190 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.75 NA NA NA 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 22 29354166 37989938 1 2 190 1 1 0 0 0 0.57 0.29 6 0 0 6 5 6 7 5 5 33.48 0.25 98.14 0 2 1 Whitelist OV-US 0.68 0.54 0 0 0.64 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0a48873a-092a-4b25-822b-b0b3c18c08a8 X 16432874 16501582 1 1 190 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 33.48 99.77 0 0 1 NA Whitelist OV-US 0.62 0.2 0 NA 0.59 0 No OV-US 0a48873a-092a-4b25-822b-b0b3c18c08a8 OV 0.9 1.75 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 2 OV-US DO32237 TCGA-24-2024 0a48873a-092a-4b25-822b-b0b3c18c08a8 female deceased C56.9 72 1769 NA NA Included Ovary-AdenoCA OV US 1 58.19 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 1 187523364 194560525 3 3 174 1 0 1 1 0 0.8 0.16 3 0 0 NA NA NA 26 5 8 58.36 53.67 46.29 0 4 3 Whitelist OV-US 0.87 0.36 0 0 0.84 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 2 2471432 237349046 1 15 174 7 0 0 0 8 0 0.17 24 0 0 24 7 15 25 7 9 58.36 96.93 0.1 0 4 3 Whitelist OV-US 0.1 0.38 0 0 0.01 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 22 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 3 68557708 170744819 1 3 174 2 0 0 1 0 0.3 0.3 7 0 0 7 4 7 8 4 4 58.36 62.24 34.59 0 3 4 Whitelist OV-US 0.62 0.54 0 0 0.59 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 4 4563942 29367958 1 2 174 2 0 0 0 0 0.11 0.01 2 0 0 NA NA NA 8 3 3 58.36 13.36 86.53 0 1 2 Whitelist OV-US 0.54 0.06 0 0 0.48 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 5 25924580 80761095 1 3 174 3 0 0 0 0 0.03 0.16 7 0 0 7 4 5 11 5 6 58.36 54.4 42.94 0 2 3 Whitelist OV-US 0.41 0.36 0 0 0.33 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 6 10445961 139134381 1 11 174 5 1 0 0 5 0.01 0.42 10 0 0 10 5 10 13 6 6 58.36 65.98 33.9 0 3 2 Whitelist OV-US 0.34 0.67 0 0 0.19 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 17 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 7 19989921 152506026 1 4 174 2 0 1 0 1 0.3 0.74 7 0 0 7 7 7 9 9 9 58.36 99.78 0 0 3 4 Whitelist OV-US 0.68 0.91 0 0 0.59 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 8 59542153 123021272 8 8 174 1 1 3 3 0 0.57 0 18 0 0 18 11 11 30 12 12 58.36 96.55 0.03 9 5 6 Whitelist OV-US 0.68 0 0 0 0.64 1 High confidence OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA After polyploidization 16 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 9 35290655 71336374 1 2 174 2 0 0 0 0 0.11 0.07 4 NA 0 4 4 4 5 5 5 58.36 0.12 99.17 0 1 2 Whitelist OV-US 0.54 0.21 NA 0 0.48 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 10 56404122 134361570 1 9 174 7 0 1 1 0 0 0.04 10 0 0 10 7 10 11 7 7 58.36 99.82 0 0 4 3 Whitelist OV-US 0.15 0.15 0 0 0.11 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 11 77244398 130564041 1 6 174 4 0 1 0 1 0.04 1 10 0 0 10 3 3 15 4 4 58.36 58.32 37.71 0 3 5 Whitelist OV-US 0.54 1 0 0 0.36 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 12 2780275 40002723 1 4 174 4 0 0 0 0 0.01 0.15 7 0.01 0 7 5 7 10 5 5 58.36 30.03 65.93 0 5 4 Whitelist OV-US 0.21 0.36 0.01 0 0.16 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 13 56682419 115088016 1 3 174 2 0 0 0 1 0.11 0.84 4 0 0 4 3 4 5 3 3 58.36 42.7 57.23 0 2 1 Whitelist OV-US 0.62 0.97 0 0 0.48 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 14 25945241 49051979 1 3 174 2 0 0 0 1 0.11 0.83 3 0 0 NA NA NA 6 5 5 58.36 24.72 74.37 0 2 1 Whitelist OV-US 0.41 0.97 0 0 0.48 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 15 NA NA 0 0 174 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.49 NA NA NA 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 16 443894 1956744 1 2 174 0 0 0 1 1 0.39 0.15 4 0 0 4 4 4 5 5 5 58.36 99.87 0 0 4 5 Whitelist OV-US 0.68 0.35 0 0 0.59 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 17 NA NA 0 0 174 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.26 NA NA NA 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 18 4742587 29869159 8 8 174 1 3 2 2 0 0.8 0 21 0 0 21 15 15 25 18 18 58.36 95.29 0 1 5 6 Whitelist OV-US 0.87 0.02 0 0 0.84 1 High confidence OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA After polyploidization 16 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 19 6968726 21960707 4 5 174 1 1 1 1 1 1 0 14 0 0 14 3 5 25 5 5 58.36 52.92 39.8 0 5 4 Whitelist OV-US 0.93 0 0 0 1 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 20 14427893 15475735 2 4 174 1 1 0 0 2 0.57 0.04 4 0 0 4 0 3 8 3 4 58.36 90.65 0.86 0 5 3 Whitelist OV-US 6 0.54 0.13 0 0 0.64 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 21 15551745 25474573 1 3 174 1 1 0 0 1 0.57 0.17 4 0 0 4 4 4 5 4 4 58.36 49.04 20.52 0 2 3 Whitelist OV-US 0.62 0.38 0 0 0.64 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 22 45575840 45708416 1 1 174 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 58.36 0.26 99.4 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::0c1a2e7d-e7e4-481e-a012-ef214c444497 X 41018869 113974227 1 2 174 1 1 0 0 0 0.57 0.12 2 0 0 NA NA NA NA NA NA 58.36 99.76 0.01 0 1 2 Whitelist OV-US 0.68 0.3 0 0 0.64 1 No OV-US 0c1a2e7d-e7e4-481e-a012-ef214c444497 OV 0.9 2.97 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 2 OV-US DO31729 TCGA-04-1542 0c1a2e7d-e7e4-481e-a012-ef214c444497 female deceased C56.9 52 2561 NA NA Included Ovary-AdenoCA OV US 1 84.24 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 1 113121437 116292512 1 1 24 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 4 4 16.78 98.83 1.17 0 1 2 Whitelist OV-US 0.62 0.01 0 NA 0.59 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 2 0.04 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 2 199355704 199405227 1 1 24 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 16.78 0.02 99.88 0 1 2 Whitelist OV-US 0.62 0.9 NA NA 0.59 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 2 0.04 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 6 NA NA 0 0 24 0 0 0 0 0 NA 0 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.01 0.02 NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 11 37148311 42318895 4 5 24 1 1 1 1 1 1 0 5 0 0 5 3 5 11 4 10 16.78 47.06 48.73 0 2 4 Whitelist OV-US 0.93 0 0 0 1 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 9 0.19 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 13 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 17 10017692 41286080 2 2 24 0 1 0 1 0 0.57 0.14 4 NA 0 4 4 4 5 4 4 16.78 61.52 38.47 0 2 3 Whitelist OV-US 0.68 0.33 NA 0 0.64 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 4 0.08 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae 22 46951379 47001500 1 1 24 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 16.78 0.1 99.9 0 2 3 Whitelist OV-US 0.62 0.49 NA NA 0.59 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 2 0.04 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::13f5814c-1f99-4ffa-84a4-3bbd8979faae X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 13f5814c-1f99-4ffa-84a4-3bbd8979faae OV 0.88 2.07 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO27978 TCGA-13-1477 13f5814c-1f99-4ffa-84a4-3bbd8979faae female deceased C56.9 49 1662 NA NA Included Ovary-AdenoCA OV US 1 54.67 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 1 101311841 112963195 5 5 154 1 2 1 1 0 0.9 0.55 7 0 0 7 0 5 28 7 9 81.21 96.96 0 0 4 5 Whitelist OV-US 0.93 0.77 0 0 0.92 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 2 53884124 226741490 1 7 154 6 0 0 0 1 0 0.11 13 0 0 13 8 10 14 8 10 81.21 99.9 0 0 6 7 Whitelist OV-US 0.13 0.28 0 0 0.03 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 13 0.04 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 3 115405912 162841861 1 5 154 5 0 0 0 0 0 1 6 0 0 6 6 6 9 8 9 81.21 96.92 0 0 5 6 Whitelist OV-US 0.1 1 0 0 0.07 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 4 185076063 186243427 1 1 154 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 4 4 4 81.21 2.26 97.52 0 1 2 Whitelist OV-US 0.62 0.13 NA NA 0.59 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 5 149342976 162872837 1 2 154 2 0 0 0 0 0.11 0.14 1 0 0 NA NA NA 4 0 0 81.21 55.03 42.3 0 4 NA Whitelist OV-US 0.54 0.33 0 0 0.48 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 6 58165813 106822892 21 21 154 5 5 7 4 0 0.82 0 34 0 0 34 3 5 59 18 18 81.21 97.17 0 0 3 21 Whitelist OV-US 0.89 0 0 0 0.87 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 42 0.14 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 7 3562493 155393789 1 7 154 6 0 0 1 0 0 0.72 11 0 0 11 7 11 11 7 7 81.21 99.77 0 0 4 3 Whitelist OV-US 0.13 0.9 0 0 0.09 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 14 0.05 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 8 65400827 68678416 2 3 154 0 2 0 0 1 0.11 0.58 5 0 0 5 5 5 12 11 11 81.21 99.99 0 7 5 4 Whitelist OV-US 0.41 0.81 0 0 0.48 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 5 0.02 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 9 NA NA 0 0 154 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.12 NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 10 28885088 61290339 1 5 154 5 0 0 0 0 0 0.44 8 0 0 8 7 8 10 9 9 81.21 96.65 0 0 5 4 Whitelist OV-US 0.1 0.69 0 0 0.07 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 11 NA NA 0 0 154 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.05 NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 12 280423 20208244 20 20 154 6 5 4 5 0 0.94 0 29 0 0 29 4 4 34 4 4 81.21 99.9 0 0 6 8 Whitelist OV-US 0.96 0 0 0 0.96 0 Low confidence OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA With other complex events 40 0.13 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 13 42051509 42194244 1 1 154 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 81.21 99.88 0.12 0 2 3 Whitelist OV-US 0.62 0.21 NA NA 0.59 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 14 20438370 23024208 2 2 154 1 0 1 0 0 0.57 1 4 0 0 4 4 4 7 4 4 81.21 94 2.29 0 3 4 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 15 41981927 101060561 1 4 154 3 0 0 0 1 0.03 0.33 6 0 0 6 4 6 6 4 6 81.21 75.57 24.43 0 3 2 Whitelist OV-US 0.21 0.58 0 0 0.33 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 7 0.02 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 16 NA NA 0 0 154 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.42 NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 17 64313680 75967527 1 1 154 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 6 4 6 81.21 95.55 0 0 3 4 Whitelist OV-US 0.62 0.95 NA NA 0.59 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 18 23849516 40471380 1 2 154 1 1 0 0 0 0.57 0.45 2 NA 0 NA NA NA NA NA NA 81.21 99.82 0.14 0 2 3 Whitelist OV-US 0.68 0.69 NA 0 0.64 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 19 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 20 2189254 19700404 2 2 154 1 1 0 0 0 0.57 1 5 NA 0.01 5 5 5 7 6 6 81.21 99.03 0 0 6 7 Whitelist OV-US 0.68 1 NA 0.01 0.64 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 21 NA NA 0 0 154 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 22 46488376 46626203 1 1 154 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 81.21 99.73 0.27 0 2 3 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::15556b28-c6bd-455a-87b6-4b7b3e33d0e4 X NA NA 0 0 154 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.03 NA NA NA 0 No OV-US 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 OV 0.84 3.91 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7579476_-_GA,CN:5 5 OV-US DO28024 TCGA-25-1634 15556b28-c6bd-455a-87b6-4b7b3e33d0e4 female deceased C56.9 75 1091 NA NA Included Ovary-AdenoCA OV US 1 35.89 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 1 43143969 247644708 1 8 122 2 4 1 0 1 0.17 1 11 0 0 11 3 5 12 4 4 52.86 61.93 38.06 1 2 4 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 15 0.06 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 2 55356973 68391753 2 2 122 0 1 1 0 0 0.57 0.74 3 0 0 NA NA NA 13 5 5 52.86 85.77 11.54 0 3 4 Whitelist OV-US 0.68 0.91 0 0 0.64 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 3 159370991 184488839 1 5 122 1 2 0 0 2 0.3 0.72 9 0 0 9 5 9 13 5 5 52.86 96.85 0 0 5 4 Whitelist OV-US 0.68 0.9 0 0 0.59 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 4 22451207 22991766 1 1 122 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 52.86 0.14 99.84 0 2 NA Whitelist OV-US 0.62 0.02 NA NA 0.59 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 5 3726415 128374298 1 14 122 3 4 1 0 6 0.17 0 22 0 0 22 4 6 24 4 5 52.86 87.71 9.61 0 5 6 Whitelist OV-US 0.9 0.02 0 0 0.59 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 22 0.09 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 6 46351456 46584187 2 2 122 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 10 4 4 52.86 34.25 62.92 0 4 5 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 7 84485080 142862408 1 4 122 3 1 0 0 0 0.11 1 6 0 0 6 6 6 9 9 9 52.86 34.64 65.24 5 2 3 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 8 2076091 4425723 2 2 122 1 0 0 1 0 0.57 0.03 3 0 0 NA NA NA 24 7 7 52.86 81.02 15.55 11 2 1 Whitelist OV-US 0.68 0.12 0 0 0.64 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 9 138300019 139412221 2 2 122 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 5 4 5 52.86 14 82.65 0 2 4 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 10 112269611 112282497 3 3 122 0 1 1 1 0 0.8 0.28 2 0 0 NA NA NA 12 8 8 52.86 96.54 0.01 0 3 4 Whitelist OV-US 0.87 0.52 0 0 0.84 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 11 NA NA 0 0 122 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.32 NA NA NA 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 12 96557424 100281195 1 2 122 0 2 0 0 0 0.11 0.67 4 0 0 4 4 4 8 6 6 52.86 25.48 70.78 0 2 3 Whitelist OV-US 0.54 0.87 0 0 0.48 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 13 36047199 101135051 1 3 122 0 3 0 0 0 0.03 0.8 4 0 0 4 3 4 5 3 5 52.86 100 0 0 3 4 Whitelist OV-US 0.41 0.95 0 0 0.33 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 14 NA NA 0 0 122 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.81 NA NA NA 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 15 55746653 56204028 1 1 122 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 4 3 4 52.86 15.86 79.26 0 1 2 Whitelist OV-US 0.62 0.93 NA NA 0.59 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 16 15977690 30446199 1 2 122 1 1 0 0 0 0.57 0.78 2 NA 0 NA NA NA 5 4 5 52.86 46.9 48.58 0 3 4 Whitelist OV-US 0.68 0.93 NA 0 0.64 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 17 49448028 80912587 1 6 122 1 0 1 1 3 0.8 0.05 4 0 0 4 3 4 5 3 5 52.86 38.24 61.4 0 3 1 Whitelist OV-US 0.62 0.16 0 0 0.84 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 18 22972304 26207209 5 5 122 1 1 1 2 0 0.9 0 7 0 0 7 3 4 18 3 4 52.86 14.15 85.82 0 12 13 Whitelist OV-US 0.93 0 0 0 0.92 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 19 6675541 30399770 1 7 122 2 1 1 2 1 0.88 0 20 0 0 20 3 4 24 3 4 52.86 34.22 56.93 0 4 5 Whitelist OV-US 0.96 0 0 0 0.91 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 20 35766163 45523839 1 2 122 2 0 0 0 0 0.11 0.19 3 0 0 NA NA NA 6 4 5 52.86 92.87 0 0 6 5 Whitelist OV-US 0.54 0.42 0 0 0.48 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 21 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 22 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 X NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 OV 0.75 2.77 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 OV-US DO32646 TCGA-24-0982 206ce0ed-36a4-47ab-ac8e-f6fca6ac5c18 female deceased C56.9 77 679 NA NA Included Ovary-AdenoCA OV US 1 22.34 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 1 8799389 247051701 1 13 204 6 5 0 0 2 0.01 0.7 24 0 0 24 14 24 24 14 14 58.66 96.97 0 0 4 3 Whitelist OV-US 0.18 0.89 0 0 0.2 0 Linked to low confidence OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA With other complex events 24 0.06 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 2 13982295 203148446 1 2 204 2 0 0 0 0 0.11 0 4 0 0.04 4 4 4 6 6 6 58.66 99.9 0 0 3 4 Whitelist OV-US 0.54 0 0 0.04 0.48 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 3 15109935 168602841 1 11 204 8 2 0 0 1 0 0.68 19 0 0 19 8 16 20 8 8 58.66 76.26 20.59 0 2 3 Whitelist OV-US 0.1 0.88 0 0 0.04 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 21 0.05 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 4 42264826 44424730 3 5 204 2 1 0 0 2 0.3 0.21 8 0 0 8 8 8 24 13 18 58.66 30.18 69.72 0 3 4 Whitelist OV-US 0.62 0.44 0 0 0.59 0 Linked to low confidence OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA After polyploidization 8 0.02 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 5 12399998 45103030 18 46 204 4 6 1 7 28 0.2 0 64 0 0 64 6 6 75 8 8 58.66 97.25 0.09 0 7 8 Whitelist OV-US 0.72 0 0 0 0.59 0 Low confidence OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA With other complex events 64 0.16 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 6 33596664 33652618 1 1 204 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 58.66 99.86 0 0 3 4 Whitelist OV-US 0.62 0 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 7 16989169 36481223 1 2 204 2 0 0 0 0 0.11 0.06 4 0.82 0 4 4 4 8 5 5 58.66 99.71 0.06 0 2 3 Whitelist OV-US 0.54 0.19 0.82 0 0.48 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 8 35295216 98160788 1 13 204 2 0 2 1 8 0.53 0.01 23 0 0 23 3 5 25 3 5 58.66 80.36 16.22 0 6 5 Whitelist OV-US 4_5_9 0.8 0.05 0 0 0.64 0 Linked to low confidence OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA With other complex events 18 0.04 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 9 27733530 74958549 1 4 204 2 0 1 0 1 0.3 0.59 12 0 0 12 5 12 13 6 6 58.66 46.4 50.49 0 3 2 Whitelist OV-US 0.54 0.81 0 0 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 10 9211497 73567135 1 2 204 0 1 0 1 0 0.57 0.09 5 0 0 5 3 4 9 3 4 58.66 40.8 55.84 0 2 3 Whitelist OV-US 0.68 0.25 0 0 0.64 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 11 117810033 117825069 1 1 204 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 58.66 0 99.44 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 12 44144711 107411931 1 6 204 1 4 0 0 1 0.04 0.62 8 0 0 8 6 8 10 8 8 58.66 99.92 0 0 4 3 Whitelist OV-US 0.54 0.83 0 0 0.36 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 13 20323197 20510642 1 1 204 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 58.66 0.16 99.84 0 1 2 Whitelist OV-US 0.62 0.05 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 14 41426766 81937123 1 6 204 1 4 0 0 1 0.04 0.69 10 0 0 10 4 10 10 4 4 58.66 30.06 69.03 0 2 3 Whitelist OV-US 0.54 0.89 0 0 0.36 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 15 98450214 98472688 1 1 204 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 58.66 0.02 99.98 0 2 3 Whitelist OV-US 0.62 0.16 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 16 19522990 19738996 1 1 204 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 5 5 58.66 89.28 10.4 0 2 3 Whitelist OV-US 0.62 0.41 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 17 42065992 56133657 1 2 204 0 2 0 0 0 0.11 0.39 1 NA 0 NA NA NA NA NA NA 58.66 22.28 77.72 0 2 NA Whitelist OV-US 0.54 0.63 NA 0 0.48 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 18 10015499 37598323 1 2 204 1 0 0 1 0 0.57 1 6 0 0 6 3 4 8 3 5 58.66 18.78 75.34 0 2 1 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 19 30340862 58891648 24 47 204 10 4 5 5 23 0.3 0 68 0 0 68 5 6 76 5 5 58.66 49.68 42.64 0 3 4 Whitelist OV-US 1_4_5 0.69 0 0 0 0.59 0 Low confidence OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA With other complex events 71 0.17 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 20 36141600 57958511 1 2 204 0 1 0 1 0 0.57 0.46 4 0 0 4 3 4 9 3 5 58.66 93.19 0 0 5 6 Whitelist OV-US 0.68 0.7 0 0 0.64 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 21 35341323 35537791 1 1 204 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 58.66 70.05 0 0 3 4 Whitelist OV-US 0.62 0.76 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 22 31317119 31704649 1 1 204 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 58.66 0.76 99.24 0 2 3 Whitelist OV-US 0.62 0.91 NA NA 0.59 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 X 7320254 123193012 1 2 204 2 0 0 0 0 0.11 0.02 4 0 0 4 4 4 7 7 7 58.66 0.68 99.09 0 1 2 Whitelist OV-US 0.54 0.06 0 0 0.48 0 No OV-US 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 OV 0.9 2.96 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_A_C,CN:2 4 OV-US DO28952 TCGA-24-1544 21f6bf91-dfc6-4a59-8b76-88a0f95c7b47 female deceased C56.9 71 820 NA NA Included Ovary-AdenoCA OV US 1 26.97 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 1 11256059 246496102 1 20 360 2 15 0 0 3 0 0.17 51 0 0 51 12 41 53 12 12 35.08 25.84 74.16 0 3 2 Whitelist OV-US 0 0.38 0 0 0 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 37 0.05 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 2 63359467 68279067 3 3 360 0 3 0 0 0 0.03 0.03 8 0 0 8 0 3 89 11 11 35.08 42.92 56.99 0 5 6 Whitelist OV-US 0.41 0.11 0 0 0.33 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 3 166009306 172043412 4 4 360 0 4 0 0 0 0.01 0.76 10 0 0 10 3 4 39 8 8 35.08 44.5 55.45 0 5 6 Whitelist OV-US 0.21 0.92 0 0 0.16 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 4 88503348 173545880 3 3 360 1 0 1 1 0 0.8 0.6 14 0 0 14 10 14 43 11 19 35.08 32.63 67.36 0 2 1 Whitelist OV-US 0.87 0.81 0 0 0.84 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 5 111950654 171572542 2 7 360 0 4 0 0 3 0.01 0.16 24 0 0 24 7 17 51 13 13 35.08 18.56 81.3 0 3 2 Whitelist OV-US 0.13 0.36 0 0 0.16 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 6 17576533 22272013 3 3 360 0 3 0 0 0 0.03 0.44 6 0 0 6 3 6 49 17 17 35.08 35.56 64.3 0 3 4 Whitelist OV-US 0.41 0.69 0 0 0.33 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 7 122216306 122673375 5 5 360 0 2 2 1 0 0.53 0.41 3 0 0 NA NA NA 43 19 19 35.08 12.09 85.34 0 2 3 Whitelist OV-US 0.68 0.66 0 0 0.64 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 8 126855043 131411919 3 4 360 0 3 0 0 1 0.03 0 7 0 0 7 0 3 54 10 10 35.08 73.26 26.5 0 4 6 Whitelist OV-US 0.21 0.01 0 0 0.33 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 9 6027145 139217466 2 6 360 0 3 0 1 2 0.11 0.89 18 0 0 18 3 7 19 3 7 35.08 26.16 73.19 0 2 3 Whitelist OV-US 0.62 1 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 10 72527358 75114125 2 2 360 1 1 0 0 0 0.57 0.06 4 0 0 4 3 4 15 9 9 35.08 38.99 60.83 0 2 1 Whitelist OV-US 0.68 0.18 0 0 0.64 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 11 35264952 39823270 4 5 360 2 0 1 1 1 0.57 0.13 10 0 0 10 4 6 44 8 11 35.08 32.15 67.56 0 2 4 Whitelist OV-US 0.93 0.32 0 0 0.64 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 12 9762639 126691039 1 28 360 0 26 0 1 1 0 0.01 58 0 0 58 49 49 61 52 52 35.08 26.14 73.78 0 3 2 Whitelist OV-US 0 0.04 0 0 0 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 55 0.08 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 13 37002882 90905210 1 6 360 2 4 0 0 0 0.06 0.08 16 0 0 16 6 14 21 8 17 35.08 19 81 0 2 3 Whitelist OV-US 0.54 0.23 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 14 52500641 102331703 1 5 360 0 2 0 0 3 0.11 0.45 10 0 0 10 10 10 14 14 14 35.08 93.83 5.26 0 1 2 Whitelist OV-US 0.45 0.69 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 15 64975189 77646879 4 4 360 1 3 0 0 0 0.11 0.14 8 0 0 8 5 8 14 5 5 35.08 12.1 87.77 0 3 2 Whitelist OV-US 0.54 0.34 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 16 7186361 12936392 3 3 360 0 1 1 1 0 0.8 0.74 8 0 0 8 5 8 22 8 8 35.08 63.97 31.32 0 3 2 Whitelist OV-US 0.87 0.91 0 0 0.84 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 17 17446816 81089743 1 16 360 1 6 1 0 8 0.01 0.01 20 0 0 20 6 14 21 6 6 35.08 60.51 33.92 0 2 4 Whitelist OV-US 1 0.62 0.06 0 0 0.21 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 24 0.03 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 18 41289568 74606040 1 6 360 0 6 0 0 0 0 0.32 10 0 0 10 8 10 11 8 8 35.08 6.74 93.22 0 3 2 Whitelist OV-US 0.04 0.58 0 0 0.03 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 19 8176562 37402945 3 8 360 0 6 0 0 2 0 0.02 29 0 0 29 8 9 34 8 9 35.08 88.62 4.1 0 5 4 Whitelist OV-US 0.28 0.08 0 0 0.03 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 20 11378611 25274839 4 4 360 1 3 0 0 0 0.11 0.86 8 0 0 8 4 5 15 7 7 35.08 11.56 82.06 0 3 4 Whitelist OV-US 0.54 0.99 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 21 17808746 24160901 2 2 360 0 1 1 0 0 0.57 0.09 5 0 0 5 4 5 16 10 10 35.08 50.65 17.9 0 1 2 Whitelist OV-US 0.68 0.25 0 0 0.64 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e 22 29946298 30437187 4 4 360 0 3 1 0 0 0.11 0.21 7 0 0 7 0 3 14 4 4 35.08 99.36 0.64 0 14 2 Whitelist OV-US 0.54 0.44 0 0 0.48 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::29949b65-2913-4c86-bbd7-b85c5df6f15e X 3505144 138525262 1 17 360 4 10 0 0 3 0 1 28 0 0 28 10 19 32 10 10 35.08 6.37 93.4 0 2 3 Whitelist OV-US 0.2 1 0 0 0.02 0 No OV-US 29949b65-2913-4c86-bbd7-b85c5df6f15e OV 0.91 2.12 Ovary-AdenoCA NA 31 0.04 nonsynonymous_SNV,17_7578536_C_T,CN:1 0 OV-US DO29940 TCGA-61-2000 29949b65-2913-4c86-bbd7-b85c5df6f15e female alive C56.9 67 NA 441 NA Included Ovary-AdenoCA OV US 0 14.51 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 1 21927365 231389754 1 24 329 1 6 2 2 13 0.15 0.02 22 0 0 22 5 9 26 5 7 70.69 97.51 2.49 0 5 4 Whitelist OV-US 14_5 0.83 0.07 0 0 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 35 0.05 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 2 21620002 238206714 1 15 329 5 4 0 0 6 0.03 0.49 28 0 0 28 6 9 31 7 8 70.69 82.47 17.44 0 4 2 Whitelist OV-US 0.54 0.73 0 0 0.33 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 3 148378001 150272557 2 2 329 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 20 7 9 70.69 99.82 0.06 0 4 6 Whitelist OV-US 0.68 0.07 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 4 178207689 180332919 1 2 329 0 0 1 1 0 0.57 0.22 2 0 0 NA NA NA 9 3 3 70.69 50.62 46.74 0 3 4 Whitelist OV-US 0.68 0.46 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 5 35750071 174926443 1 15 329 3 3 1 0 8 0.28 0.82 8 0 0 8 8 8 8 8 8 70.69 51.19 48.67 0 2 4 Whitelist OV-US 1 0.93 0.96 0 0 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 22 0.03 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 6 78463188 84239970 2 4 329 0 0 1 1 2 0.57 0 1 0 0 NA NA NA 19 5 6 70.69 99.62 0.12 0 3 NA Whitelist OV-US 1 0 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 7 93270332 147842934 2 5 329 0 0 1 1 3 0.57 0.27 5 0 0 5 4 5 13 4 5 70.69 99.74 0.03 2 5 6 Whitelist OV-US 0.93 0.51 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 8 586173 124682281 1 16 329 4 4 0 0 8 0.05 0.26 19 0 0 19 3 5 20 3 5 70.69 67.53 28.64 0 5 6 Whitelist OV-US 1 0.95 0.5 0 0 0.46 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 9 7514369 111735400 1 6 329 3 0 0 0 3 0.03 0.89 7 0 0 7 4 5 8 4 4 70.69 80.87 18.43 0 4 2 Whitelist OV-US 14 0.68 1 0 0 0.33 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 10 49785317 109183466 2 5 329 1 0 1 0 3 0.57 0.9 5 0 0 5 5 5 7 5 7 70.69 84.16 15.72 0 4 2 Whitelist OV-US 11 0.93 1 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 11 8804606 119007571 1 13 329 4 3 0 0 6 0.06 0.05 19 0 0 19 8 15 21 8 11 70.69 68.99 30.58 0 4 2 Whitelist OV-US 10 0.68 0.16 0 0 0.48 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 12 32554012 133176040 1 16 329 7 2 0 1 6 0.01 0 22 0 0 22 3 7 25 3 7 70.69 76.06 23.35 1 2 4 Whitelist OV-US 0.54 0.01 0 0 0.19 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 26 0.04 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 13 95926222 96332826 1 1 329 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 4 3 4 70.69 12.78 87.22 0 2 3 Whitelist OV-US 0.62 0.46 0 NA 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 14 38561337 92256367 2 4 329 0 0 1 1 2 0.57 0.01 18 0 0 18 5 8 21 5 8 70.69 99.31 0.03 0 4 5 Whitelist OV-US 0.68 0.05 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 15 85923892 99275448 1 4 329 1 2 0 0 1 0.3 0.01 7 0 0 7 4 7 18 8 8 70.69 39.63 60.29 0 6 4 Whitelist OV-US 0.68 0.03 0 0 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 16 50510157 65218284 1 1 329 1 0 0 0 0 0.39 0.86 2 0 NA NA NA NA 4 4 4 70.69 51.19 47.86 0 2 4 Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 17 1352847 27338851 1 2 329 0 2 0 0 0 0.11 0.23 4 0 0.04 4 0 3 7 3 4 70.69 47.75 46.86 0 4 2 Whitelist OV-US 0.54 0.47 0 0.04 0.48 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 18 NA NA 0 0 329 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 0 NA NA 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 19 7205017 7215865 1 1 329 1 0 0 0 0 0.39 0.31 1 0 NA NA NA NA 5 4 4 70.69 63.28 36.53 0 2 NA Whitelist OV-US 0.62 0.57 0 NA 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 20 8077851 32586371 1 7 329 1 1 0 0 5 0.57 0.25 4 0 0 4 3 4 5 3 3 70.69 99.05 0 0 4 3 Whitelist OV-US 0.77 0.49 0 0 0.64 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 21 NA NA 0 0 329 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.95 NA NA NA 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 22 NA NA 0 0 329 0 0 0 0 0 NA 0.3 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.54 0 NA NA 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::2b14123b-8fcd-402c-9399-4e7c47f20252 X 10696605 62089317 1 7 329 1 2 0 0 4 0.3 0.17 9 0 0 9 3 4 14 3 3 70.69 23.64 76.13 0 2 4 Whitelist OV-US 0.96 0.38 0 0 0.59 0 No OV-US 2b14123b-8fcd-402c-9399-4e7c47f20252 OV 0.77 3.57 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577117_C_A,CN:2 7 OV-US DO30090 TCGA-24-2290 2b14123b-8fcd-402c-9399-4e7c47f20252 female deceased C48.1 56 1102 NA NA Included Ovary-AdenoCA OV US 1 36.25 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 1 19133355 191379145 1 4 206 3 0 0 0 1 0.03 0.6 5 0 0 5 3 3 11 6 6 37.78 11.41 88.59 0 1 2 Whitelist OV-US 0.21 0.82 0 0 0.33 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 2 42853176 82599269 1 4 206 2 0 0 0 2 0.11 0.62 2 0 0 NA NA NA NA NA NA 37.78 0 99.9 0 1 2 Whitelist OV-US 12 0.62 0.83 0 0 0.48 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 3 76078101 76195926 1 1 206 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 5 3 3 37.78 8.91 91.03 0 1 2 Whitelist OV-US 0.62 0.14 0 NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 4 9042618 83813780 1 5 206 4 0 0 0 1 0.01 1 4 0 0 4 4 4 4 4 4 37.78 70.13 29.86 0 1 2 Whitelist OV-US 0.45 1 0 0 0.16 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 5 63744596 166348803 1 7 206 6 0 0 0 1 0 0.03 4 0 0 4 4 4 11 8 8 37.78 40.81 59.05 0 1 2 Whitelist OV-US 0.13 0.11 0 0 0.03 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 6 47955767 160955120 1 4 206 4 0 0 0 0 0.01 0.03 3 0 0 NA NA NA NA NA NA 37.78 99.86 0 0 1 0 Whitelist OV-US 0.21 0.1 0 0 0.16 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 7 3311757 95565258 4 10 206 0 0 2 2 6 0.26 0 5 0 0 5 3 5 11 5 5 37.78 59.56 40.21 0 2 1 Whitelist OV-US 0.62 0 0 0 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 8 11029333 11062863 1 1 206 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 6 3 3 37.78 28.83 67.14 0 0 1 Whitelist OV-US 0.62 0.17 0 NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 9 5349624 119790699 1 13 206 2 2 1 1 7 0.88 0 7 0 0 7 5 7 7 5 5 37.78 0.71 98.59 0 2 1 Whitelist OV-US 0.9 0 0 0 0.91 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 10 19650819 107011918 1 6 206 1 0 0 1 4 0.57 0.87 4 0 0 4 3 4 6 3 3 37.78 52.06 44.59 0 2 1 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 11 898947 50134754 17 17 206 3 2 6 6 0 0.39 0 9 0 0 9 9 9 10 10 10 37.78 34.26 65.18 0 1 2 Whitelist OV-US 0.62 0 0 0 0.59 1 High confidence OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA Canonical without polyploidization 34 0.08 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 12 58797168 58952700 2 2 206 1 0 1 0 0 0.57 0.87 4 0 0 4 4 4 5 5 5 37.78 0.05 99.87 0 1 2 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 13 26757766 81989837 1 4 206 2 1 0 0 1 0.3 0.85 1 0 0 NA NA NA NA NA NA 37.78 100 0 0 1 NA Whitelist OV-US 0.68 0.98 0 0 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 14 90561378 90575523 1 1 206 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 37.78 0.9 98.18 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 15 82101914 82131819 1 1 206 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 37.78 58.39 41.51 0 1 NA Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 16 24856686 24868050 1 1 206 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 37.78 0.01 99.09 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 17 63929375 74663652 1 2 206 2 0 0 0 0 0.11 0.83 4 0 0 4 3 4 6 3 6 37.78 72.38 27.58 0 2 0 Whitelist OV-US 0.54 0.97 0 0 0.48 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 18 7195138 38178089 1 4 206 2 0 1 0 1 0.3 0.51 4 0 0 4 4 4 4 4 4 37.78 12.66 87.3 0 1 2 Whitelist OV-US 0.68 0.75 0 0 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 19 56055499 56173216 1 1 206 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 37.78 99.63 0.2 0 1 2 Whitelist OV-US 0.62 0.69 NA NA 0.59 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 20 3647414 35607777 1 5 206 3 0 0 0 2 0.03 0.01 4 0 0 4 3 4 6 5 5 37.78 14.07 85.02 0 2 1 Whitelist OV-US 0.45 0.03 0 0 0.33 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 21 NA NA 0 0 206 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.76 NA NA NA 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a 22 NA NA 0 0 206 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::30b8f4cd-9245-4496-a8a8-c3e59093bc0a X 4913937 16745953 1 2 206 1 1 0 0 0 0.57 0.87 2 0 0 NA NA NA 4 4 4 37.78 91.36 8.41 0 1 2 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US 30b8f4cd-9245-4496-a8a8-c3e59093bc0a OV 0.9 1.74 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:1 2 OV-US DO30970 TCGA-04-1367 30b8f4cd-9245-4496-a8a8-c3e59093bc0a female alive C56.9 50 NA 2174 NA Included Ovary-AdenoCA OV US 0 71.51 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 1 73647143 212987911 3 3 161 0 1 1 1 0 0.8 0.19 14 0 0 14 6 9 21 10 16 30.67 41.23 58.77 0 3 2 Whitelist OV-US 0.87 0.41 0 0 0.84 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 2 20328396 218482845 1 21 161 2 6 0 1 12 0.03 0 17 0 0 17 5 11 18 5 5 30.67 23.01 76.9 0 2 3 Whitelist OV-US 0.66 0.02 0 0 0.33 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 30 0.09 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 3 41543931 168720880 1 9 161 1 6 0 0 2 0 0.36 18 0 0 18 16 18 18 16 16 30.67 25.44 74.42 0 3 2 Whitelist OV-US 0.41 0.61 0 0 0.09 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 16 0.05 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 4 48423247 119665107 1 7 161 0 3 0 0 4 0.03 0.53 6 0 0 6 4 6 6 4 4 30.67 40.1 59.68 0 2 1 Whitelist OV-US 15 0.62 0.76 0 0 0.33 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 5 14803041 147618394 1 3 161 1 1 0 0 1 0.57 0.05 5 0.03 0 5 3 5 6 3 3 30.67 59.4 40.48 0 2 1 Whitelist OV-US 0.62 0.16 0.03 0 0.64 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 6 143987879 144138656 1 1 161 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA 4 3 3 30.67 51.81 48.05 0 1 NA Whitelist OV-US 0.62 0.2 NA NA 0.59 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 7 132291074 133262033 2 8 161 0 2 0 0 6 0.11 0.02 3 0 0 NA NA NA 7 3 3 30.67 62.52 37.25 0 3 4 Whitelist OV-US 2 0.87 0.08 0 0 0.48 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 8 16581448 144762726 1 7 161 1 6 0 0 0 0 1 11 0 0 11 5 11 12 5 5 30.67 36.63 63.27 0 3 2 Whitelist OV-US 0.13 1 0 0 0.09 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 9 6684933 6755874 3 3 161 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 12 9 9 30.67 27.8 71.5 0 2 3 Whitelist OV-US 0.87 0 0 0 0.84 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 10 81095014 113877359 2 4 161 1 0 1 0 2 0.57 0.09 2 0 0 NA NA NA 18 7 7 30.67 33.28 66.58 0 1 2 Whitelist OV-US 0.68 0.25 0 0 0.64 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 11 NA NA 0 0 161 0 0 0 0 0 NA 0.71 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.9 0 NA NA 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 12 48255777 62296215 1 9 161 3 2 0 0 4 0.14 0 8 0 0 8 3 8 17 4 4 30.67 11.02 88.9 0 2 1 Whitelist OV-US 3 0.97 0.02 0 0 0.59 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 13 89698880 112768173 1 3 161 0 3 0 0 0 0.03 0.38 4 0 0 4 3 4 5 3 3 30.67 12.96 87.04 0 3 2 Whitelist OV-US 0.41 0.63 0 0 0.33 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 14 33341253 81896406 1 3 161 0 2 0 0 1 0.11 0.65 9 0 0 9 4 9 12 4 5 30.67 27.89 71.2 0 3 2 Whitelist OV-US 0.62 0.86 0 0 0.48 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 15 35791580 51114555 1 6 161 0 4 0 0 2 0.01 0.22 5 0 0 5 5 5 5 5 5 30.67 0.07 99.92 0 2 3 Whitelist OV-US 0.25 0.45 0 0 0.16 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 16 20725124 89962567 1 5 161 0 3 0 0 2 0.03 0.33 4 0 0 4 4 4 6 5 5 30.67 19.57 79.9 0 2 3 Whitelist OV-US 1 0.45 0.58 0 0 0.33 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 17 53957285 53982637 2 3 161 1 0 0 1 1 0.57 0 4 0 0 4 3 4 11 4 4 30.67 90.37 9.63 0 2 1 Whitelist OV-US 0.62 0.02 0 0 0.64 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 18 13437838 77468220 1 5 161 1 4 0 0 0 0.04 0.33 8 0 0 8 7 8 9 7 7 30.67 2.63 96.55 0 2 3 Whitelist OV-US 0.45 0.58 0 0 0.36 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 19 NA NA 0 0 161 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 20 NA NA 0 0 161 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.94 NA NA NA 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 21 22444179 22528616 1 1 161 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 30.67 7.24 70.11 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a 22 28997817 29427869 1 1 161 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 4 4 4 30.67 31.38 68.62 0 1 2 Whitelist OV-US 0.62 0.15 0 NA 0.59 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3768d34f-1527-40db-b116-cd80cee5ec3a X 36690139 43991393 1 2 161 1 1 0 0 0 0.57 0.36 3 0 0 NA NA NA 4 3 3 30.67 30.23 69.54 0 2 3 Whitelist OV-US 0.68 0.62 0 0 0.64 0 No OV-US 3768d34f-1527-40db-b116-cd80cee5ec3a OV 0.89 2.03 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 OV-US DO32420 TCGA-09-2045 3768d34f-1527-40db-b116-cd80cee5ec3a female deceased C56.9 50 1069 NA NA Included Ovary-AdenoCA OV US 1 35.16 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 1 6281442 226959021 1 13 328 7 1 0 0 5 0 0.36 14 0 0 14 7 14 17 7 7 43.01 12.22 84.74 0 2 1 Whitelist OV-US 0.1 0.61 0 0 0.04 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 2 193770213 193919524 5 5 328 2 0 2 1 0 0.53 0 3 0 0 NA NA NA 38 13 13 43.01 38.44 61.47 0 3 2 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 3 47990381 178997449 1 10 328 1 3 0 0 6 0.11 0.03 10 0 0 10 4 7 11 4 8 43.01 74 25.82 0 2 4 Whitelist OV-US 8 0.62 0.11 0 0 0.48 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 4 93669615 100896732 2 2 328 0 0 1 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 43.01 86.97 12.99 0 1 NA Whitelist OV-US 0.68 0.15 0 0 0.64 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 5 16808102 176517528 1 9 328 6 0 1 1 1 0.01 0.36 5 0 0 5 5 5 7 6 6 43.01 62.63 34.61 0 1 2 Whitelist OV-US 0.41 0.61 0 0 0.21 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 6 124204905 168217589 2 4 328 1 1 1 1 0 1 1 1 0 0 NA NA NA 11 5 5 43.01 23.21 73.73 0 2 NA Whitelist OV-US 1 1 0 0 1 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 7 22348253 69321620 1 10 328 2 0 0 0 8 0.11 0.27 6 0 0 6 6 6 8 8 8 43.01 16.43 83.34 0 1 2 Whitelist OV-US 0.86 0.51 0 0 0.48 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 8 13273298 119240995 1 16 328 3 1 0 0 12 0.11 0 12 0 0 12 5 12 19 5 5 43.01 73.4 23.04 0 3 4 Whitelist OV-US 14 0.95 0 0 0 0.48 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 9 85485063 139656676 1 7 328 3 1 0 0 3 0.11 0.39 11 0 0 11 8 11 16 13 13 43.01 22.01 77.82 0 2 1 Whitelist OV-US 0.62 0.64 0 0 0.48 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 10 66751276 70781155 4 4 328 2 0 1 1 0 0.57 0.05 4 0 0 4 4 4 20 15 15 43.01 43.58 56.23 0 1 2 Whitelist OV-US 0.68 0.15 0 0 0.64 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 11 2262035 47655676 4 10 328 2 1 1 0 6 0.57 0.09 8 0 0 8 4 7 16 9 9 43.01 1.01 98.56 0 2 3 Whitelist OV-US 14_8 0.96 0.24 0 0 0.64 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 12 49507888 124124700 1 3 328 3 0 0 0 0 0.03 1 5 0 0 5 5 5 8 5 5 43.01 8.55 91.37 0 2 1 Whitelist OV-US 0.41 1 0 0 0.33 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 13 NA NA 0 0 328 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.03 NA NA NA 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 14 21476151 77149537 1 9 328 3 1 1 0 4 0.28 0.15 14 0 0 14 7 14 15 7 7 43.01 1.38 97.71 0 2 1 Whitelist OV-US 8 0.85 0.35 0 0 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 15 31441553 48018589 1 3 328 2 0 1 0 0 0.3 0.73 2 0 0 NA NA NA 5 3 3 43.01 96.67 3.2 0 0 1 Whitelist OV-US 0.62 0.91 0 0 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 16 14406745 29685328 1 3 328 2 1 0 0 0 0.3 0.86 6 0 0 6 4 6 11 5 5 43.01 55.86 39.01 0 2 1 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 17 1743856 46525112 1 9 328 1 2 1 1 4 0.9 0.06 4 0 0 4 4 4 5 5 5 43.01 98.84 1.06 0 1 2 Whitelist OV-US 1 0.68 0.18 0 0 0.92 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 18 14304208 14320551 1 1 328 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 43.01 71.47 28.49 0 2 NA Whitelist OV-US 0.62 0.02 NA NA 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 19 46716676 46890119 2 6 328 0 0 2 2 2 0.26 0 1 0 0 NA NA NA 17 6 6 43.01 67.09 25.29 0 1 NA Whitelist OV-US 1 0.62 0 0 0 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 20 50084125 50099342 1 1 328 1 0 0 0 0 0.39 0.44 1 0 NA NA NA NA 4 4 4 43.01 8.55 90.47 0 2 NA Whitelist OV-US 0.62 0.69 0 NA 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 21 37641899 37679950 1 1 328 1 0 0 0 0 0.39 0.31 1 0 NA NA NA NA 4 4 4 43.01 37.78 39.94 0 1 NA Whitelist OV-US 0.62 0.55 0 NA 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a 22 25107925 34341497 1 2 328 2 0 0 0 0 0.11 0.45 1 0 0 NA NA NA NA NA NA 43.01 100 0 0 1 NA Whitelist OV-US 0.54 0.69 0 0 0.48 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::3c037acf-f453-4513-a6dd-129163ddde2a X 5497848 146017350 1 7 328 3 2 1 0 1 0.34 0.8 8 0 0 8 5 8 9 5 5 43.01 3.98 95.79 0 2 1 Whitelist OV-US 0.77 0.95 0 0 0.59 0 No OV-US 3c037acf-f453-4513-a6dd-129163ddde2a OV 0.95 1.74 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577511_T_A,CN:1 2 OV-US DO31869 TCGA-09-2050 3c037acf-f453-4513-a6dd-129163ddde2a female alive C56.9 65 NA 2163 NA Included Ovary-AdenoCA OV US 0 71.15 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 1 211633171 211799103 1 1 78 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 63.54 99.93 0.07 0 2 3 Whitelist OV-US 0.62 0.12 NA NA 0.59 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 2 NA NA 0 0 78 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.2 NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 3 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 4 13213288 47714147 1 3 78 3 0 0 0 0 0.03 0.82 3 0 0 NA NA NA 7 3 5 63.54 88.45 11.54 0 4 2 Whitelist OV-US 0.41 0.96 0 0 0.33 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 5 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 6 20732385 65386033 10 10 78 2 5 2 1 0 0.31 0.01 18 0 0 18 11 18 19 11 11 63.54 38.18 61.68 0 4 6 Whitelist OV-US 0.62 0.03 0 0 0.59 1 High confidence OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA Before polyploidization 20 0.13 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 7 92681833 92988154 1 1 78 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA 5 3 4 63.54 69.4 30.36 0 4 5 Whitelist OV-US 0.62 0.69 NA NA 0.59 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 8 54212615 55385811 5 5 78 1 1 2 1 0 0.9 0 6 0 0 6 4 4 19 4 4 63.54 94.72 1.75 2 10 12 Whitelist OV-US 0.93 0 0 0 0.92 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 9 NA NA 0 0 78 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.93 NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 10 85985992 129074283 1 4 78 1 1 2 0 0 0.57 0.78 4 0 0 4 3 4 5 3 3 63.54 96.57 3.25 0 4 2 Whitelist OV-US 0.68 0.94 0 0 0.64 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 11 25910959 134800844 1 1 78 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 63.54 80.66 19.18 0 3 NA Whitelist OV-US 0.62 0.51 NA NA 0.59 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 12 NA NA 0 0 78 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist OV-US NA 0.81 NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 13 102766006 102776963 1 1 78 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 4 63.54 30.17 69.83 0 2 NA Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 14 64698553 71944826 1 2 78 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 63.54 98.9 0.19 0 3 2 Whitelist OV-US 0.68 1 NA 0 0.64 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 15 43004758 79639733 1 5 78 1 2 1 1 0 0.9 0.02 8 0 0 8 5 7 9 5 7 63.54 77.67 22.25 0 4 5 Whitelist OV-US 0.93 0.09 0 0 0.92 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 16 48681639 48932327 1 2 78 0 0 1 1 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 63.54 47.41 52.49 0 1 NA Whitelist OV-US 0.68 0.71 0 0 0.64 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 17 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 18 72780360 72832070 1 1 78 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 5 63.54 95.36 4.6 0 3 4 Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 19 10117072 19925765 10 11 78 1 4 2 3 1 0.57 0 26 0 0 26 7 7 34 7 9 63.54 27.36 63.96 3 4 6 Whitelist OV-US 0.74 0 0 0 0.64 1 High confidence OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA With other complex events 21 0.13 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 20 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f 22 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4b930a10-4b12-4428-84f9-3255b4a3bc4f X 12639472 49177833 1 2 78 0 2 0 0 0 0.11 0.8 2 0 0 NA NA NA NA NA NA 63.54 0.08 99.69 0 2 3 Whitelist OV-US 0.54 0.95 0 0 0.48 1 No OV-US 4b930a10-4b12-4428-84f9-3255b4a3bc4f OV 0.78 3.15 Ovary-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:2 3 OV-US DO29308 TCGA-04-1349 4b930a10-4b12-4428-84f9-3255b4a3bc4f female deceased C56.9 69 656 NA NA Included Ovary-AdenoCA OV US 1 21.58 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 1 77110298 190949538 1 4 96 0 4 0 0 0 0.01 0.25 6 0 0 6 4 6 6 4 4 36.92 41.89 58.1 0 3 2 Whitelist OV-US 0.21 0.49 0 0 0.16 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 8 0.04 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 2 43139198 219897430 1 5 96 0 5 0 0 0 0 0.36 6 0 0 6 6 6 7 7 7 36.92 0.13 99.78 0 2 3 Whitelist OV-US 0.1 0.61 0 0 0.07 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 10 0.05 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 3 174772949 175030693 1 1 96 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 3 4 36.92 18.6 81.26 0 3 4 Whitelist OV-US 0.62 0.2 NA NA 0.59 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 4 4561511 183003967 19 19 96 6 5 3 5 0 0.8 0 35 0 0 35 22 35 36 23 23 36.92 78.58 21.22 0 1 2 Whitelist OV-US 0.87 0 0 0 0.84 1 High confidence OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA Canonical without polyploidization 38 0.2 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 5 114352487 171892596 1 2 96 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 36.92 0.55 99.33 1 1 2 Whitelist OV-US 0.54 0.33 NA 0 0.48 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 6 33476412 33515901 1 1 96 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA 5 3 3 36.92 58.31 41.55 0 2 3 Whitelist OV-US 0.62 0.63 NA NA 0.59 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 7 98399786 121600997 1 2 96 0 2 0 0 0 0.11 0.49 4 0 0 4 4 4 6 5 5 36.92 36.68 60.17 0 2 3 Whitelist OV-US 0.54 0.74 0 0 0.48 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 8 4279727 4445926 1 1 96 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 36.92 0.11 99.88 0 2 3 Whitelist OV-US 0.62 0.26 NA NA 0.59 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 9 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 10 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 11 44797680 125468262 7 7 96 2 1 2 2 0 0.93 0.01 12 0 0 12 12 12 13 13 13 36.92 63.54 36.03 2 1 2 Whitelist OV-US 0.96 0.06 0 0 0.95 1 High confidence OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA Canonical without polyploidization 14 0.07 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 12 4470991 70144374 13 14 96 3 1 4 5 1 0.44 0 29 0 0 29 6 10 36 7 11 36.92 71.26 28.66 3 2 1 Whitelist OV-US 0.68 0 0 0 0.64 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 27 0.14 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 13 108107170 108711990 4 4 96 1 1 1 1 0 1 0.39 7 0 0 7 4 5 8 4 6 36.92 5.81 94.19 0 2 3 Whitelist OV-US 1 0.64 0 0 1 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 8 0.04 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 14 77289095 77777159 2 2 96 0 1 1 0 0 0.57 1 4 0 0 4 3 4 5 3 3 36.92 0.46 98.63 0 3 2 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 15 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 16 3790545 4305824 1 1 96 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 36.92 75.98 23.69 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 17 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 18 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 19 NA NA 0 0 96 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.69 NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 20 52061397 61157334 1 2 96 0 2 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 36.92 0 99.02 0 2 NA Whitelist OV-US 0.54 1 NA 0 0.48 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e X NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e OV 0.83 1.77 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28412 TCGA-24-1562 4c18d9cf-4af4-4a86-8b1c-f78795fbbd7e female deceased C56.9 67 1384 NA NA Included Ovary-AdenoCA OV US 1 45.53 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 1 14990970 241778369 1 32 545 0 8 0 0 24 0 0.08 13 0 0 13 5 13 14 6 6 32.36 13.47 83.55 0 2 1 Whitelist OV-US 5_8 0.62 0.23 0 0 0 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 40 0.04 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 2 12447905 234169661 4 28 545 1 1 2 0 24 0.57 0.16 7 0 0 7 5 7 14 5 10 32.36 3.2 96.69 0 2 3 Whitelist OV-US 0.9 0.37 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 32 0.03 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 3 61998538 66796980 2 2 545 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 15 4 7 32.36 30 69.88 0 2 3 Whitelist OV-US 0.68 0.17 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 4 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 4 510643 174210983 1 33 545 0 8 1 0 24 0 0.2 12 0 0 12 8 8 12 8 8 32.36 63.77 36.13 0 2 1 Whitelist OV-US 8 0.68 0.42 0 0 0.02 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 42 0.04 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 5 11787249 113469350 1 18 545 1 2 0 0 15 0.3 0.02 9 0 0 9 6 9 11 7 7 32.36 40.56 59.3 5 1 2 Whitelist OV-US 1 0.54 0.08 0 0 0.59 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 21 0.02 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 6 13723478 17970087 2 2 545 0 1 1 0 0 0.57 0.21 1 0 0 NA NA NA 11 5 5 32.36 45.72 54.04 0 2 NA Whitelist OV-US 0.68 0.43 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 4 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 7 2564855 150994792 1 42 545 3 7 0 0 32 0 0 9 0 0 9 4 7 9 4 4 32.36 65.7 34.07 0 2 3 Whitelist OV-US 1_2_X 0.62 0 0 0 0.14 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 52 0.05 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 8 14368513 144394438 1 27 545 2 4 0 0 21 0.06 0.02 14 0 0 14 5 14 15 5 5 32.36 32.52 67.47 0 3 2 Whitelist OV-US 1_4 0.62 0.09 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 33 0.03 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 9 17229081 114410290 2 4 545 0 0 1 1 2 0.57 0.12 3 0 0 NA NA NA 5 3 3 32.36 17.96 81.88 0 1 2 Whitelist OV-US 4 0.62 0.31 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 6 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 10 47136303 134896518 2 32 545 0 1 0 1 30 0.57 0 13 0 0 13 4 9 15 4 5 32.36 35.76 64.07 0 2 3 Whitelist OV-US 1_4_5_8_X 0.87 0 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 34 0.03 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 11 19455337 121072079 1 14 545 0 6 0 0 8 0 0.36 14 0 0 14 13 14 15 13 13 32.36 23.95 75.49 0 2 3 Whitelist OV-US X 0.23 0.61 0 0 0.03 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 20 0.02 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 12 72689943 126319480 2 16 545 0 0 1 1 14 0.57 0 4 0 0 4 4 4 13 8 8 32.36 35.97 63.95 0 1 2 Whitelist OV-US 22_5_8 0.68 0.01 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 18 0.02 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 13 50194499 50632923 2 2 545 0 0 1 1 0 0.57 0.56 1 0 0 NA NA NA 8 8 8 32.36 65.55 34.45 0 1 NA Whitelist OV-US 0.68 0.78 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 4 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 14 104177972 104203094 2 4 545 0 2 0 0 2 0.11 0 3 0 0 NA NA NA 11 7 7 32.36 49.89 49.2 0 1 2 Whitelist OV-US 1 0.54 0.02 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 6 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 15 36410601 87193799 1 6 545 0 2 0 0 4 0.11 0.7 3 0 0 NA NA NA 4 3 3 32.36 13.51 86.4 0 2 3 Whitelist OV-US 0.93 0.89 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 8 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 16 15676634 52316351 3 4 545 0 1 1 1 1 0.8 0 3 0 0 NA NA NA 8 3 3 32.36 37.86 62.04 0 1 2 Whitelist OV-US 1 0.03 0 0 0.84 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 7 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 17 42813647 57337293 1 2 545 0 2 0 0 0 0.11 0.79 5 0 0 5 3 5 6 4 4 32.36 55.48 44.52 0 2 1 Whitelist OV-US 0.54 0.94 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 4 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 18 59097521 75877866 1 4 545 0 0 0 1 3 0.39 0.79 1 0 0 NA NA NA 4 4 4 32.36 34.65 65.32 0 2 NA Whitelist OV-US X 0.54 0.94 0 0 0.59 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 5 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 19 12819474 14857574 1 2 545 0 2 0 0 0 0.11 0.28 1 0 0 NA NA NA NA NA NA 32.36 14.4 84.46 0 2 NA Whitelist OV-US 0.54 0.52 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 4 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 20 23900622 55243812 2 10 545 0 0 1 1 8 0.57 0 3 0 0 NA NA NA NA NA NA 32.36 0.25 98.75 0 2 3 Whitelist OV-US 1_2 0.68 0 0 0 0.64 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 12 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 21 33605640 33667937 1 2 545 1 0 0 0 1 0.39 0.05 2 0 NA NA NA NA NA NA NA 32.36 0.13 77.22 0 1 2 Whitelist OV-US 4 0.68 0.16 0 NA 0.59 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 3 0 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc 22 26004636 35986540 1 5 545 0 2 0 0 3 0.11 0 6 0 0 6 6 6 6 6 6 32.36 44.42 55.58 0 1 2 Whitelist OV-US 5 0.62 0.02 0 0 0.48 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 7 0.01 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::4eac2c98-86d2-4ee6-a1d3-157d013c78dc X 30289488 150390659 1 29 545 1 6 0 0 22 0 0 23 0 0 23 6 18 24 7 7 32.36 34.61 65.16 0 2 3 Whitelist OV-US 11_5 0.3 0.01 0 0 0.09 0 No OV-US 4eac2c98-86d2-4ee6-a1d3-157d013c78dc OV 0.92 1.81 Ovary-AdenoCA NA 36 0.03 NA 2 OV-US DO32391 TCGA-09-1666 4eac2c98-86d2-4ee6-a1d3-157d013c78dc female alive C56.9 57 NA 1752 NA Included Ovary-AdenoCA OV US 0 57.63 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 1 160197643 202580641 1 2 113 1 1 0 0 0 0.57 0.11 3 0 0 NA NA NA 7 3 3 20.05 6.57 93.43 0 1 2 Whitelist OV-US 0.68 0.29 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 4 0.02 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 2 10483957 43320031 1 3 113 2 1 0 0 0 0.3 0.17 5 0 0 5 3 5 5 3 3 20.05 0.17 99.74 0 2 1 Whitelist OV-US 0.62 0.39 0 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 3 8003802 118684879 1 4 113 2 1 1 0 0 0.57 0.19 3 0 0 NA NA NA NA NA NA 20.05 0.85 99.05 0 2 3 Whitelist OV-US 0.68 0.42 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 8 0.04 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 4 18532328 60760857 1 3 113 2 1 0 0 0 0.3 0.09 3 0 0 NA NA NA NA NA NA 20.05 97.29 2.68 0 1 2 Whitelist OV-US 0.62 0.25 0 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 5 19201272 149197239 1 3 113 1 2 0 0 0 0.3 0.17 6 0.01 0 6 5 6 7 5 5 20.05 0.62 99.37 0 2 3 Whitelist OV-US 0.62 0.38 0.01 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 6 72114788 72155079 2 2 113 0 1 1 0 0 0.57 0.69 3 0 0 NA NA NA 5 5 5 20.05 0.54 99.33 0 2 3 Whitelist OV-US 0.68 0.89 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 4 0.02 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 7 9510053 125852512 1 3 113 1 2 0 0 0 0.3 0.29 1 0 0 NA NA NA NA NA NA 20.05 0 99.78 0 2 NA Whitelist OV-US 0.62 0.54 0 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 8 42245764 81342210 2 4 113 0 0 1 1 2 0.57 0.29 6 0 0 6 3 6 11 3 10 20.05 48.8 51.04 0 1 3 Whitelist OV-US 16 0.68 0.53 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 9 124677543 132386275 1 4 113 3 1 0 0 0 0.11 1 7 0 0 7 5 7 8 5 5 20.05 3.31 95.99 0 2 1 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 8 0.04 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 10 75493228 76005382 1 3 113 0 1 0 0 2 0.39 0.5 2 NA 0 NA NA NA NA NA NA 20.05 0.38 99.45 0 2 3 Whitelist OV-US 0.62 0.74 NA 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 4 0.02 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 11 33028510 33453244 1 2 113 0 2 0 0 0 0.11 0.18 4 NA 0 4 3 4 5 3 3 20.05 0.31 99.26 0 3 2 Whitelist OV-US 0.54 0.4 NA 0 0.48 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 4 0.02 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 12 17804209 25436246 6 6 113 3 2 1 0 0 0.34 0 15 0 0 15 4 4 32 5 5 20.05 16.96 82.95 0 2 6 Whitelist OV-US 0.62 0 0 0 0.59 0 Low confidence OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA With other complex events 12 0.05 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 13 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 14 68067582 68971557 2 3 113 0 0 1 1 1 0.57 0.78 4 0 0 4 3 4 4 3 3 20.05 35.2 63.89 0 2 1 Whitelist OV-US 0.87 0.94 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 5 0.02 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 15 41802303 42040877 1 1 113 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 4 20.05 0.23 94.86 0 1 2 Whitelist OV-US 0.62 0.63 NA NA 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 16 2392956 18251337 1 5 113 0 1 0 1 3 0.57 0 7 0 0 7 7 7 9 9 9 20.05 58.88 40.45 0 2 1 Whitelist OV-US 0.93 0.01 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 7 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 17 46439760 65033377 1 6 113 0 3 0 0 3 0.03 0.13 9 0 0 9 7 9 10 7 9 20.05 59.15 40.85 0 2 3 Whitelist OV-US 20 0.62 0.32 0 0 0.33 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 9 0.04 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 18 741073 24550764 3 4 113 0 1 2 0 1 0.3 0.03 9 0 0 9 8 9 10 8 8 20.05 92.5 7.46 0 1 2 Whitelist OV-US 0.68 0.12 0 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 7 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 19 8237536 9510238 3 3 113 0 2 0 1 0 0.3 0 4 0 0 4 3 4 19 4 4 20.05 43.57 48.29 0 3 2 Whitelist OV-US 0.62 0 0 0 0.59 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 20 15780626 58876946 1 6 113 1 2 0 1 2 0.57 0.04 9 0 0 9 5 7 10 5 7 20.05 2.87 96.16 0 2 3 Whitelist OV-US 17 0.93 0.13 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 10 0.04 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 21 17192152 46507392 1 4 113 0 1 0 1 2 0.57 0 1 0 0 NA NA NA NA NA NA 20.05 66.76 10.6 0 1 NA Whitelist OV-US 16 1 0 0 0 0.64 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 6 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 22 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::58d34254-4f5b-40a4-9e9f-7160062fb2a4 X 78304359 149910527 1 4 113 1 1 0 1 1 0.8 1 3 0 0 NA NA NA NA NA NA 20.05 0.25 99.52 0 2 3 Whitelist OV-US 0.68 1 0 0 0.84 0 No OV-US 58d34254-4f5b-40a4-9e9f-7160062fb2a4 OV 0.93 1.9 Ovary-AdenoCA NA 7 0.03 NA 2 OV-US DO28289 TCGA-13-0912 58d34254-4f5b-40a4-9e9f-7160062fb2a4 female alive C56.9 58 NA 1036 NA Included Ovary-AdenoCA OV US 0 34.08 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 1 19995601 44453593 14 29 318 4 7 1 2 15 0.11 0 44 0 0 44 5 8 78 8 11 74.72 97.03 0 3 3 4 Whitelist OV-US 5 0.65 0 0 0 0.48 1 Low confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 43 0.07 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 2 29255147 191672689 10 30 318 3 3 1 3 20 0.75 0 65 0 0 65 12 15 68 12 12 74.72 97.31 0 0 5 4 Whitelist OV-US 10_7 0.68 0 0 0 0.83 1 High confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 40 0.06 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 3 37394143 174170696 1 7 318 3 3 0 0 1 0.11 0 12 0 0 12 3 12 12 3 3 74.72 99.97 0 0 5 4 Whitelist OV-US 0.54 0 0 0 0.48 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 13 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 4 85955703 86532709 3 3 318 2 0 1 0 0 0.3 1 1 0 0 NA NA NA 27 8 8 74.72 45.37 54.53 0 3 NA Whitelist OV-US 0.62 1 0 0 0.59 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 6 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 5 37201411 40485617 4 10 318 1 2 1 0 6 0.57 0 13 0 0 13 5 8 38 5 5 74.72 13.02 84.3 6 9 4 Whitelist OV-US 1 0.86 0 0 0 0.64 1 Linked to low confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 14 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 6 86414207 159165775 1 4 318 3 1 0 0 0 0.11 0.06 6 0 0 6 6 6 16 8 8 74.72 96.72 0 0 3 4 Whitelist OV-US 0.54 0.18 0 0 0.48 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 8 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 7 1928595 38075628 5 14 318 0 1 3 1 9 0.28 0 15 0 0 15 4 6 34 5 6 74.72 97.43 0 0 4 3 Whitelist OV-US 10_2 0.81 0.01 0 0 0.59 1 Linked to high confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 19 0.03 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 8 36412485 122841678 1 2 318 1 1 0 0 0 0.57 0.04 9 0 0 9 6 9 14 6 6 74.72 71.1 25.48 0 3 4 Whitelist OV-US 0.68 0.14 0 0 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 4 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 9 29744151 140014330 1 8 318 1 1 0 0 6 0.57 0.39 12 0 0 12 3 5 13 3 5 74.72 99.24 0.06 0 3 4 Whitelist OV-US 1_10 0.41 0.63 0 0 0.64 1 Linked to low confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 10 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 10 4028896 29263433 1 16 318 1 0 0 2 13 0.3 0 13 0 0 13 9 9 22 9 9 74.72 99.82 0 0 4 3 Whitelist OV-US 2_7 0.68 0.02 0 0 0.59 1 Linked to high confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA After polyploidization 19 0.03 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 11 17847717 30008460 1 3 318 1 1 0 0 1 0.57 0.08 3 0 0 NA NA NA 4 3 4 74.72 99.44 0 0 3 4 Whitelist OV-US 0.87 0.23 0 0 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 5 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 12 44542331 85299341 7 36 318 3 0 2 2 29 0.44 0 44 0 0 44 4 5 61 5 10 74.72 96.26 0 1 5 4 Whitelist OV-US 10_2_5_7 0.64 0 0 0 0.64 1 Low confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 43 0.07 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 13 NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.01 NA NA NA 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 0 0 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 14 27577050 86875021 1 11 318 1 2 2 1 5 0.88 0.52 12 0 0 12 4 8 14 4 8 74.72 44.21 37.03 0 2 3 Whitelist OV-US 0.98 0.76 0 0 0.91 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 17 0.03 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 15 34454949 37129100 1 1 318 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 74.72 99.9 0 0 4 5 Whitelist OV-US 0.62 0.02 NA NA 0.59 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 2 0 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 16 4729032 17613979 3 12 318 2 1 0 0 9 0.3 0.01 19 0 0 19 3 4 26 3 4 74.72 17.21 82.44 2 4 3 Whitelist OV-US 0.62 0.06 0 0 0.59 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 15 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 17 2270286 15234785 1 2 318 1 0 1 0 0 0.57 0.49 5 0.04 0.02 5 3 5 14 5 5 74.72 89.71 10.16 0 3 2 Whitelist OV-US 0.68 0.73 0.05 0.02 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 4 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 18 41017502 68893904 2 5 318 1 1 0 0 3 0.57 0.38 6 0 0 6 4 6 8 6 8 74.72 99.9 0 0 3 4 Whitelist OV-US 0.93 0.63 0 0 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 7 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 19 10432957 15192271 2 4 318 2 0 0 0 2 0.11 0.15 6 0 0 6 0 3 18 3 4 74.72 52.71 40 0 3 6 Whitelist OV-US 0.68 0.35 0 0 0.48 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 6 0.01 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 20 12723041 58103806 2 9 318 1 1 0 0 7 0.57 0.03 10 0 0 10 5 10 15 5 5 74.72 93.25 0 0 6 5 Whitelist OV-US 7 0.54 0.11 0 0 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 11 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 21 NA NA 0 0 318 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.82 NA NA NA 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 0 0 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 22 26771648 39636023 1 6 318 0 1 1 2 2 0.57 0.01 8 0 0 8 4 8 10 4 4 74.72 33.34 66.66 0 3 2 Whitelist OV-US 6 0.68 0.06 0 0 0.64 1 No OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA NA 10 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5c127332-5ca0-45f1-a5ac-4876ad94e491 X 44952592 67674499 2 8 318 1 0 0 1 6 0.57 0.05 13 0 0 13 3 4 21 5 8 74.72 70.15 29.62 1 3 2 Whitelist OV-US 1 0.62 0.17 0 0 0.64 1 Linked to low confidence OV-US 5c127332-5ca0-45f1-a5ac-4876ad94e491 OV 0.8 3.95 Ovary-AdenoCA With other complex events 10 0.02 NA 5 OV-US DO28053 TCGA-25-2400 5c127332-5ca0-45f1-a5ac-4876ad94e491 female deceased C56.9 76 1278 NA NA Included Ovary-AdenoCA OV US 1 42.04 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 1 163626665 164166879 3 3 68 1 0 1 1 0 0.8 0.11 4 0 0 4 4 4 11 11 11 32.25 13.93 86.07 0 2 3 Whitelist OV-US 0.87 0.29 0 0 0.84 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 2 83070719 83082158 1 1 68 1 0 0 0 0 0.39 0.38 2 0 NA NA NA NA NA NA NA 32.25 0 99.9 0 1 2 Whitelist OV-US 0.62 0.63 0 NA 0.59 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 3 NA NA 0 0 68 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.48 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 4 68174510 68449277 2 2 68 0 0 1 1 0 0.57 0 4 0 0 4 4 4 16 7 8 32.25 65.04 34.75 0 3 4 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 5 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 6 155109118 155405818 1 1 68 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 32.25 0.17 99.68 0 1 2 Whitelist OV-US 0.62 0.95 NA NA 0.59 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 7 155541357 156460681 1 1 68 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 32.25 0.58 99.19 0 2 3 Whitelist OV-US 0.62 0.51 NA NA 0.59 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 8 61692251 104537739 1 4 68 4 0 0 0 0 0.01 0.16 6 0 0 6 6 6 7 6 6 32.25 64.77 35.22 0 2 3 Whitelist OV-US 0.21 0.37 0 0 0.16 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 9 114314872 114523615 1 1 68 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA 6 6 6 32.25 30.11 69.22 0 1 2 Whitelist OV-US 0.62 0.92 NA NA 0.59 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 10 NA NA 0 0 68 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.93 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 11 NA NA 0 0 68 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.63 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 12 61360660 133730846 3 4 68 0 1 1 1 1 0.8 0 9 0 0 9 3 3 16 3 3 32.25 71.37 24.82 0 2 3 Whitelist OV-US 0.68 0.01 0 0 0.84 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 13 NA NA 0 0 68 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.91 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 14 106643627 106964330 2 2 68 1 0 1 0 0 0.57 0 5 0 0 5 0 3 17 4 4 32.25 9.22 75.69 3 18 19 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 16 NA NA 0 0 68 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist OV-US NA 0.28 0 NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 17 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 19 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 20 NA NA 0 0 68 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.4 NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::5e18b17d-4626-4b6d-8ac6-e560cee0376c X 31311971 139583480 1 4 68 2 2 0 0 0 0.26 0.78 5 0 0 5 3 5 6 4 4 32.25 37.23 59.4 0 2 1 Whitelist OV-US 0.62 0.93 0 0 0.59 0 No OV-US 5e18b17d-4626-4b6d-8ac6-e560cee0376c OV 0.94 1.89 Ovary-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 OV-US DO30550 TCGA-24-1419 5e18b17d-4626-4b6d-8ac6-e560cee0376c female alive C56.9 62 NA 239 NA Included Ovary-AdenoCA OV US 0 7.86 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 1 49001313 234639795 1 4 216 0 3 0 0 1 0.03 0 16 0 0 16 6 7 17 7 7 55.98 99.98 0 0 4 3 Whitelist OV-US 0.21 0 0 0 0.33 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 2 4604930 237814630 1 10 216 2 5 0 0 3 0.02 0.09 12 0 0 12 4 12 12 4 4 55.98 73.42 23.88 1 2 3 Whitelist OV-US 3 0.47 0.24 0 0 0.33 1 Linked to low confidence OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA With other complex events 17 0.04 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 3 79636893 115666941 36 48 216 9 12 7 8 12 0.67 0 57 0 0 57 5 7 75 9 9 55.98 90.75 6.05 0 8 9 Whitelist OV-US 7 0.9 0 0 0 0.74 1 Low confidence OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA With other complex events 84 0.19 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 4 74000117 183575849 1 2 216 0 2 0 0 0 0.11 0 4 0 0 4 4 4 6 6 6 55.98 26.48 70.96 0 2 3 Whitelist OV-US 0.54 0.01 0 0 0.48 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 5 4232598 162149661 1 7 216 1 5 0 0 1 0.01 0.26 14 0 0 14 6 14 15 6 6 55.98 26.13 71.2 0 3 2 Whitelist OV-US 0.47 0.5 0 0 0.19 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 6 10162201 153326050 1 3 216 0 2 0 0 1 0.11 0.01 6 0.02 0 6 6 6 7 7 7 55.98 10.98 88.88 0 2 3 Whitelist OV-US 0.62 0.03 0.02 0 0.48 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 7 17472055 156811083 4 6 216 0 2 0 2 2 0.26 0.45 18 0 0 18 12 18 20 12 12 55.98 89.51 10.26 2 4 3 Whitelist OV-US 0.68 0.69 0 0 0.59 1 Linked to low confidence OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA After polyploidization 10 0.02 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 8 41434548 42381147 2 2 216 1 0 0 1 0 0.57 0.88 9 0 0 9 0 3 17 7 8 55.98 68 28.4 0 7 2 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 9 133730957 133876071 1 1 216 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 16 9 9 55.98 65.96 30.93 0 4 5 Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 10 5575016 112920508 1 3 216 0 3 0 0 0 0.03 0.02 7 0.01 0 7 6 7 8 6 6 55.98 28.97 67.6 0 2 3 Whitelist OV-US 0.41 0.08 0.01 0 0.33 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 11 57678897 58161024 3 3 216 1 0 1 1 0 0.8 1 6 0 0 6 6 6 19 9 9 55.98 98.97 0.6 0 2 3 Whitelist OV-US 0.87 1 0 0 0.84 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 12 3557109 133150225 1 1 216 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 55.98 99.39 0 0 3 NA Whitelist OV-US 0.62 0 NA NA 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 13 NA NA 0 0 216 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 14 71898363 71978069 1 1 216 0 0 1 0 0 0.39 0.07 2 NA NA NA NA NA 5 5 5 55.98 0.28 99.72 0 2 3 Whitelist OV-US 0.62 0.22 NA NA 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 15 69342940 93461407 1 2 216 1 1 0 0 0 0.57 0.4 6 0 0 6 3 6 7 3 3 55.98 30.01 65.13 0 1 2 Whitelist OV-US 0.68 0.65 0 0 0.64 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 16 4425821 53203075 1 2 216 0 2 0 0 0 0.11 0.67 5 0.48 0.04 5 4 5 8 5 5 55.98 59.66 35.2 0 1 2 Whitelist OV-US 0.54 0.87 0.48 0.04 0.48 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 17 11042403 55069493 1 4 216 0 2 0 1 1 0.3 0.83 7 0 0 7 3 6 8 3 6 55.98 47.38 52.61 0 2 3 Whitelist OV-US 0.68 0.97 0 0 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 18 3520404 70861918 1 2 216 0 2 0 0 0 0.11 0.14 5 NA 0.05 5 4 5 6 4 4 55.98 20.79 74.56 0 2 3 Whitelist OV-US 0.54 0.33 NA 0.05 0.48 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 19 39761548 40321248 4 5 216 0 1 2 1 1 0.57 0 5 0 0 5 0 3 42 5 5 55.98 56.58 36.03 0 4 22 Whitelist OV-US 0.62 0 0 0 0.64 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 20 1979378 25856531 33 33 216 10 12 6 5 0 0.26 0 30 0 0 30 29 30 32 30 30 55.98 65.8 26.54 0 3 2 Whitelist OV-US 0.62 0 0 0 0.59 1 High confidence OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA Canonical without polyploidization 66 0.15 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 21 33087396 40224750 1 3 216 0 3 0 0 0 0.03 0.75 6 0 0 6 6 6 8 7 7 55.98 47.81 29.88 0 4 5 Whitelist OV-US 0.41 0.92 0 0 0.33 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 22 41410366 41522403 1 1 216 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 55.98 0.22 99.78 0 2 3 Whitelist OV-US 0.62 0.76 NA NA 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::62379be5-13f0-474b-94d3-6f944ec4ee96 X 153164997 154783416 1 1 216 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 55.98 98.73 1.04 0 1 2 Whitelist OV-US 0.62 0 NA NA 0.59 1 No OV-US 62379be5-13f0-474b-94d3-6f944ec4ee96 OV 0.94 2.68 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577105_T_G,CN:2 3 OV-US DO31551 TCGA-24-1552 62379be5-13f0-474b-94d3-6f944ec4ee96 female deceased C56.9 77 1259 NA NA Included Ovary-AdenoCA OV US 1 41.41 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 1 1015938 238008189 1 3 98 0 3 0 0 0 0.03 0.09 6 0.02 0 6 5 6 7 5 7 57.92 100 0 0 3 5 Whitelist OV-US 0.41 0.25 0.02 0 0.33 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 2 142399120 142513711 1 1 98 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 57.92 99.84 0.05 0 2 3 Whitelist OV-US 0.62 0.02 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 3 3870182 22321973 1 3 98 1 2 0 0 0 0.3 0.69 4 0.24 0 4 3 4 9 3 3 57.92 63.14 33.68 0 2 0 Whitelist OV-US 0.62 0.89 0.24 0 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 4 46128720 46198497 1 1 98 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 57.92 0.04 99.72 0 2 4 Whitelist OV-US 0.62 0.2 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 5 56116029 180707632 1 2 98 1 1 0 0 0 0.57 0.29 4 0.31 0 4 3 4 5 3 3 57.92 2.16 97.71 0 2 0 Whitelist OV-US 0.68 0.54 0.31 0 0.64 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 6 167900422 168487608 1 1 98 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 57.92 99.65 0.1 0 0 3 Whitelist OV-US 0.62 0.12 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 7 124871627 124960567 3 3 98 1 0 1 1 0 0.8 0.01 4 0 0 4 4 4 20 8 8 57.92 62.3 34.67 0 4 6 Whitelist OV-US 0.87 0.03 0 0 0.84 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 8 66991363 110349674 1 3 98 1 1 1 0 0 0.8 0.82 6 0 0 6 5 6 7 5 5 57.92 0.63 99.28 0 2 0 Whitelist OV-US 0.87 0.96 0 0 0.84 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 9 91910037 92806633 1 1 98 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 3 3 57.92 99.8 0.09 0 3 4 Whitelist OV-US 0.62 0.41 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 10 11725608 106801462 1 5 98 0 4 1 0 0 0.04 0.46 10 0 0 10 9 10 11 9 11 57.92 99.82 0 0 4 6 Whitelist OV-US 0.45 0.71 0 0 0.36 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 11 23274340 23398460 2 2 98 0 1 0 1 0 0.57 0.03 1 0 0 NA NA NA 11 5 5 57.92 99.4 0.18 0 3 NA Whitelist OV-US 0.68 0.1 0 0 0.64 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 12 26217235 26604122 2 4 98 1 3 0 0 0 0.11 0.03 7 0 0 7 0 4 13 4 4 57.92 99.92 0 0 8 5 Whitelist OV-US 0.54 0.1 0 0 0.48 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 13 43941133 44973382 3 3 98 0 0 2 1 0 0.3 0.58 2 0 0 NA NA NA 5 3 3 57.92 99.1 0.9 0 1 2 Whitelist OV-US 0.62 0.81 0 0 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 14 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 16 2774254 86244281 4 4 98 1 3 0 0 0 0.11 0.34 1 0 0 NA NA NA NA NA NA 57.92 0 99.91 0 2 NA Whitelist OV-US 0.54 0.59 0 0 0.48 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 17 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 18 41058115 41413194 1 1 98 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 57.92 0.45 99.51 0 2 4 Whitelist OV-US 0.62 0.76 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 19 8603926 40845749 4 4 98 1 3 0 0 0 0.11 0 14 0 0 14 6 7 22 6 7 57.92 67.52 32.31 2 3 5 Whitelist OV-US 0.54 0 0 0 0.48 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 20 30304879 30356728 1 1 98 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 57.92 91.54 0 0 4 6 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 21 33437548 35792694 1 1 98 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 57.92 30.3 47.05 0 2 4 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 22 32212446 32283191 1 1 98 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 57.92 0.14 99.86 0 0 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 X 116195935 116222902 3 3 98 2 1 0 0 0 0.3 0 2 0 0 NA NA NA 15 7 7 57.92 99.38 0.27 0 3 4 Whitelist OV-US 0.62 0 0 0 0.59 0 No OV-US 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 OV 0.85 2.86 Ovary-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 4 OV-US DO31420 TCGA-24-1548 66c92b9e-de3c-4d1a-bb69-46ffbc6caf33 female deceased C56.9 57 493 NA NA Included Ovary-AdenoCA OV US 1 16.22 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 1 32653029 173409256 3 7 239 0 0 1 2 4 0.3 0.09 7 0 0 7 5 7 20 5 7 38.58 47.78 52.21 0 2 3 Whitelist OV-US 0.96 0.25 0 0 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 2 10353002 22951027 5 5 239 2 2 0 1 0 0.53 0.24 1 0 0 NA NA NA 13 9 9 38.58 13.27 86.62 0 2 NA Whitelist OV-US 0.68 0.48 0 0 0.64 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 3 47402785 191188854 1 7 239 5 0 0 0 2 0 0.61 6 0 0 6 4 6 7 4 4 38.58 36.07 63.79 0 2 3 Whitelist OV-US 1 0.13 0.82 0 0 0.07 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 12 0.03 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 4 NA NA 0 0 239 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist OV-US NA 0.36 0 NA NA 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 5 43582343 156383427 1 4 239 3 1 0 0 0 0.11 0.51 4 0 0 4 4 4 9 5 5 38.58 73.32 24 0 1 2 Whitelist OV-US 0.54 0.75 0 0 0.48 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 8 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 6 1989523 147659776 15 18 239 4 2 4 5 3 0.74 0 28 0 0 28 6 6 34 6 6 38.58 37.8 62.06 0 3 2 Whitelist OV-US 0.99 0 0 0 0.82 0 Low confidence OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA With other complex events 33 0.07 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 7 51398723 146559612 1 3 239 3 0 0 0 0 0.03 0.2 3 0 0 NA NA NA 4 4 4 38.58 3.88 95.9 0 2 1 Whitelist OV-US 0.41 0.42 0 0 0.33 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 8 8879653 104311528 1 5 239 4 0 1 0 0 0.04 0.03 6 0 0 6 4 6 9 7 7 38.58 0.38 99.61 0 2 1 Whitelist OV-US 0.45 0.1 0 0 0.36 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 9 5118077 129464519 1 7 239 5 1 0 0 1 0.01 0.74 11 0 0 11 5 11 12 6 6 38.58 14.31 85.5 0 2 3 Whitelist OV-US 0.47 0.91 0 0 0.19 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 13 0.03 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 10 2261805 110813741 1 7 239 4 0 0 1 2 0.04 0.53 8 0 0 8 4 7 10 4 5 38.58 46.5 53.32 0 3 1 Whitelist OV-US 1 0.62 0.76 0 0 0.36 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 12 0.03 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 11 2320778 124666270 1 6 239 3 3 0 0 0 0.11 0.13 7 0 0 7 5 7 7 5 5 38.58 99.39 0.05 0 1 0 Whitelist OV-US 0.54 0.31 0 0 0.48 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 12 0.03 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 12 66187107 116004184 3 3 239 2 0 0 1 0 0.3 0.09 5 0 0 5 5 5 7 5 5 38.58 0.21 99.7 0 2 1 Whitelist OV-US 0.62 0.25 0 0 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 13 84934337 84953117 1 1 239 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA 4 3 3 38.58 48.33 51.67 0 2 NA Whitelist OV-US 0.62 0.36 0 NA 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 14 82301126 82312876 1 1 239 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 38.58 0 99.09 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 15 63639252 89600699 1 3 239 1 1 0 0 1 0.57 0.69 3 0 0 NA NA NA 6 4 5 38.58 88.04 7.04 0 2 1 Whitelist OV-US 0.62 0.89 0 0 0.64 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 5 0.01 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 16 3845024 83667264 1 5 239 3 2 0 0 0 0.14 0.54 1 0 0 NA NA NA NA NA NA 38.58 99.9 0 0 1 NA Whitelist OV-US 0.62 0.77 0 0 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 10 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 17 8354733 42225538 1 5 239 1 1 0 1 2 0.8 0.31 4 0 0 4 4 4 6 4 4 38.58 85.09 14.82 0 1 2 Whitelist OV-US 0.68 0.56 0 0 0.84 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 8 0.02 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 18 71087451 71141064 1 1 239 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 4 4 4 38.58 28.36 71.6 0 2 3 Whitelist OV-US 0.62 0.36 0 NA 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 19 11172897 50269636 1 3 239 2 1 0 0 0 0.3 0.06 5 0 0 5 3 5 6 3 3 38.58 10.36 89.47 0 2 1 Whitelist OV-US 0.62 0.18 0 0 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 6 0.01 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 20 NA NA 0 0 239 0 0 0 0 0 NA 0.65 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist OV-US NA 0.86 0 NA NA 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 21 40685942 40749234 1 1 239 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA 4 4 4 38.58 2.89 74.47 0 1 2 Whitelist OV-US 0.62 0.46 0 NA 0.59 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 2 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a 22 NA NA 0 0 239 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::6d10d4ee-6331-4bba-93bc-a7b64cc0b22a X 142880170 150995590 2 2 239 0 0 1 1 0 0.57 0.05 2 0 0 NA NA NA 11 11 11 38.58 10.27 89.24 0 1 2 Whitelist OV-US 0.68 0.17 0 0 0.64 0 No OV-US 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a OV 0.87 1.84 Ovary-AdenoCA NA 4 0.01 stopgain,17_7577022_A_G,CN:1 2 OV-US DO28119 TCGA-04-1331 6d10d4ee-6331-4bba-93bc-a7b64cc0b22a female deceased C56.9 78 1336 NA NA Included Ovary-AdenoCA OV US 1 43.95 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 1 179140297 229716613 4 9 686 0 1 2 1 5 0.57 0.02 11 0 0 11 4 6 40 12 18 30.09 15.22 84.44 0 3 4 Whitelist OV-US 0.62 0.08 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 13 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 2 85566821 169153622 3 9 686 1 0 1 1 6 0.8 0.15 16 0 0 16 10 14 44 10 13 30.09 23.44 76.47 0 2 3 Whitelist OV-US 9_X 0.62 0.35 0 0 0.84 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 False positive; manually removed OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 3 31580573 161520980 3 14 686 0 0 2 1 11 0.3 0.02 14 0 0 14 5 14 28 9 9 30.09 33.13 66.75 0 2 3 Whitelist OV-US 2_4 0.68 0.08 0 0 0.59 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 4 21357758 186097187 3 25 686 1 2 2 1 19 0.88 0.06 18 0 0 18 9 16 23 9 9 30.09 34.13 65.77 0 2 1 Whitelist OV-US 10_12_3 0.68 0.18 0 0 0.91 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 31 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 False positive; manually removed OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 5 66910977 143223849 2 6 686 0 0 1 1 4 0.57 0.58 2 0 0 NA NA NA 12 4 4 30.09 61.77 38.11 0 1 2 Whitelist OV-US 2 0.54 0.8 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 6 9405680 153296808 1 32 686 2 15 0 0 15 0 0.57 14 0 0 14 12 14 14 12 12 30.09 49.68 50.18 0 2 1 Whitelist OV-US 16_18_2_21_4 0 0.8 0 0 0 0 Linked to high confidence OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA Canonical without polyploidization 49 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 7 20428304 158340088 1 25 686 1 13 1 1 9 0 0.4 19 0 0 19 7 13 21 9 13 30.09 11.84 87.91 0 2 3 Whitelist OV-US 15_2_X 0.2 0.64 0 0 0 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 41 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 8 3100649 138208042 1 24 686 4 13 0 1 6 0 0.86 14 0 0 14 6 14 14 6 6 30.09 27.94 72.05 0 2 3 Whitelist OV-US X 0.05 0.99 0 0 0.01 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 42 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 9 9234123 72466981 5 6 686 0 1 2 2 1 0.53 0.92 8 0 0 8 5 8 15 5 8 30.09 32.64 67.19 0 2 3 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 10 76557035 104096683 2 2 686 0 0 1 1 0 0.57 0.04 8 0 0 8 8 8 20 15 15 30.09 23.95 75.87 0 2 3 Whitelist OV-US 0.68 0.15 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 11 105905248 108709668 2 2 686 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 13 11 11 30.09 4.73 94.84 0 2 NA Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 12 16693692 123934826 3 11 686 0 0 2 1 8 0.3 0.04 13 0 0 13 9 12 16 9 15 30.09 14.32 85.59 0 2 3 Whitelist OV-US 4 0.98 0.13 0 0 0.59 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 False positive; manually removed OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 13 32925588 114285662 1 11 686 2 5 0 0 4 0.02 0.07 4 0 0 4 3 4 7 5 5 30.09 59.38 40.48 0 2 1 Whitelist OV-US 0.54 0.22 0 0 0.33 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 18 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 14 81701296 81912290 2 2 686 1 1 0 0 0 0.57 0.58 2 0 0 NA NA NA 14 5 5 30.09 12.94 86.14 0 2 3 Whitelist OV-US 0.68 0.81 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 15 35363568 100501028 1 25 686 5 12 0 0 8 0 0 15 0 0 15 9 15 15 9 9 30.09 21.62 78.03 0 2 3 Whitelist OV-US 16_7 0.1 0 0 0 0.01 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 42 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 16 10579569 79138532 1 14 686 2 5 0 0 7 0.02 0.41 8 0 0 8 7 8 9 7 7 30.09 43.77 56.13 0 2 3 Whitelist OV-US 15_2_6 0.62 0.65 0 0 0.33 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 21 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 17 47475024 80623553 2 8 686 1 0 0 1 6 0.57 0.81 5 0 0 5 3 5 7 3 7 30.09 77.86 22.01 0 2 3 Whitelist OV-US 15 0.62 0.96 0 0 0.64 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 18 158944 67628538 20 22 686 4 6 5 5 2 0.94 0.01 37 0 0 37 31 33 38 31 33 30.09 92.19 7.75 0 1 2 Whitelist OV-US 6 0.94 0.04 0 0 0.96 0 High confidence OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA Canonical without polyploidization 42 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 19 6762680 54488804 1 12 686 3 8 0 0 1 0 0.03 8 0 0 8 5 8 10 5 5 30.09 8.94 90.89 0 2 1 Whitelist OV-US 0.04 0.1 0 0 0.07 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 23 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 20 10251961 50178218 1 7 686 0 3 0 0 4 0.03 0.79 6 0 0 6 4 6 9 4 4 30.09 58.17 40.86 0 2 1 Whitelist OV-US 0.41 0.94 0 0 0.33 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 21 16483687 46783278 1 10 686 1 5 1 0 3 0.04 0.12 10 0 0 10 7 10 11 7 7 30.09 36.47 40.88 0 2 3 Whitelist OV-US 6 0.24 0.3 0 0 0.38 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 22 19064864 43181524 1 6 686 0 4 0 0 2 0.01 0.16 5 0 0 5 4 5 6 4 4 30.09 34.75 65.25 0 1 2 Whitelist OV-US 0.54 0.37 0 0 0.16 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::700e91bb-d675-41b2-bbbd-935767c7b447 X 8029219 122680105 1 21 686 1 10 0 0 10 0 0.79 10 0 0 10 9 10 11 9 9 30.09 0.62 99.15 0 2 3 Whitelist OV-US 2_7_8 0.25 0.95 0 0 0 0 No OV-US 700e91bb-d675-41b2-bbbd-935767c7b447 OV 0.8 1.88 Ovary-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:1 2 OV-US DO30220 TCGA-23-1118 700e91bb-d675-41b2-bbbd-935767c7b447 female alive C56.9 45 NA 2616 NA Included Ovary-AdenoCA OV US 0 86.05 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 1 165837784 165938867 2 2 275 0 1 1 0 0 0.57 0.09 3 0 0 NA NA NA 18 7 7 84.96 99.96 0 0 5 4 Whitelist OV-US 0.68 0.25 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 2 157997463 158142920 2 2 275 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 14 5 5 84.96 97.3 0 0 4 NA Whitelist OV-US 0.68 0.05 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 3 116219586 176950905 2 4 275 4 0 0 0 0 0.01 0.72 11 0 0 11 8 11 15 8 8 84.96 96.66 3.31 0 2 3 Whitelist OV-US 0.21 0.9 0 0 0.16 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 8 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 4 74151241 161673420 1 8 275 5 1 0 0 2 0.01 0.09 11 0 0 11 6 11 16 6 14 84.96 99.78 0.04 0 4 3 Whitelist OV-US 0.54 0.25 0 0 0.19 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 14 0.03 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 5 32197937 154158016 1 9 275 9 0 0 0 0 0 0.08 15 0 0 15 9 9 15 9 9 84.96 97.05 0.29 0 3 2 Whitelist OV-US 0 0.23 0 0 0 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 18 0.03 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 6 92563786 92649551 2 2 275 0 0 1 1 0 0.57 0.61 2 0 0 NA NA NA 11 8 8 84.96 99.84 0.01 0 3 4 Whitelist OV-US 0.68 0.83 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 7 NA NA 0 0 275 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.03 0 NA NA 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 0 0 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 8 28310047 134285132 1 9 275 7 0 0 0 2 0 0.68 14 0 0 14 10 11 15 10 11 84.96 96.58 0.01 0 6 5 Whitelist OV-US 0.12 0.88 0 0 0.01 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 16 0.03 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 9 19168353 19341657 2 2 275 0 0 1 1 0 0.57 0.75 1 0 0 NA NA NA 11 4 4 84.96 70.73 26.76 0 3 NA Whitelist OV-US 0.68 0.92 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 10 65520792 67624748 1 2 275 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 84.96 99.66 0.17 0 2 3 Whitelist OV-US 0.54 0.01 NA 0 0.48 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 11 56003935 131544055 63 65 275 16 15 16 16 2 1 0 152 0 0 152 11 36 157 11 12 84.96 70.82 25.42 68 6 5 Whitelist OV-US 1 0 0 0 1 1 High confidence OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA With other complex events 128 0.23 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 12 650018 61867060 1 8 275 4 0 0 2 2 0.06 0.39 25 0 0 25 4 7 32 4 5 84.96 99.86 0.05 0 7 4 Whitelist OV-US 0.62 0.64 0 0 0.48 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 14 0.03 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 13 61686204 61747461 1 1 275 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 5 5 5 84.96 99.95 0.05 0 2 3 Whitelist OV-US 0.62 0.11 0 NA 0.59 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 2 0 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 14 51960689 93651851 1 3 275 1 0 1 1 0 0.8 0.49 3 0 0 NA NA NA 6 5 6 84.96 0.01 96.28 0 2 1 Whitelist OV-US 0.87 0.73 0 0 0.84 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 6 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 15 25177708 71081679 1 1 275 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 5 4 5 84.96 95.12 0 0 4 5 Whitelist OV-US 0.62 0.14 NA NA 0.59 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 2 0 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 16 5986064 6245545 2 2 275 0 0 1 1 0 0.57 1 4 0.03 0 4 4 4 12 12 12 84.96 58.01 37.36 0 2 3 Whitelist OV-US 0.68 1 0.03 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 17 1678083 52539567 1 2 275 1 0 1 0 0 0.57 0.13 2 0 0 NA NA NA NA NA NA 84.96 99.98 0 0 1 3 Whitelist OV-US 0.68 0.32 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 4 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 18 43678596 69366643 1 3 275 1 1 0 0 1 0.57 0.13 4 NA 0 4 3 4 4 3 3 84.96 99.74 0.22 0 3 2 Whitelist OV-US 0.87 0.32 NA 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 5 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 19 12204947 17385148 3 4 275 2 0 1 0 1 0.3 0 4 0 0 4 0 3 16 3 5 84.96 92.72 0 0 8 4 Whitelist OV-US 0.68 0.02 0 0 0.59 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 7 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 20 10716482 41513737 1 3 275 1 1 1 0 0 0.8 0.84 9 0 0 9 3 5 15 3 3 84.96 92.95 0 0 8 9 Whitelist OV-US 0.87 0.97 0 0 0.84 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 6 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 21 21178151 31527969 2 7 275 0 0 1 1 5 0.57 0 14 0 0 14 4 7 24 6 6 84.96 68.29 2.31 0 6 4 Whitelist OV-US 0.77 0 0 0 0.64 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 9 0.02 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 22 NA NA 0 0 275 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.93 NA NA NA 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 0 0 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7ca97692-0bf5-4bbd-81ce-10a051d04bd5 X 7766794 123198402 1 4 275 4 0 0 0 0 0.01 0.03 6 0 0 6 4 6 7 4 7 84.96 43.58 56.19 0 3 2 Whitelist OV-US 0.21 0.1 0 0 0.16 1 No OV-US 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 OV 0.96 3.74 Ovary-AdenoCA NA 8 0.01 NA 4 OV-US DO29146 TCGA-10-0938 7ca97692-0bf5-4bbd-81ce-10a051d04bd5 female deceased C56.9 80 636 NA NA Included Ovary-AdenoCA OV US 1 20.92 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 1 40402190 40859457 2 2 665 0 2 0 0 0 0.11 0 4 0 0 4 3 4 50 10 16 70.43 90.71 9.29 0 5 4 Whitelist OV-US 0.54 0.01 0 0 0.48 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 4 0 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 2 100265270 222653043 17 33 665 4 4 3 6 16 0.77 0 60 0 0 60 9 12 97 11 17 70.43 71.9 25.4 0 3 2 Whitelist OV-US 10_4_5_6 0.62 0 0 0 0.84 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 50 0.04 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 False positive; manually removed OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 3 101663947 139539104 15 19 665 1 7 4 3 4 0.17 0 16 0 0 16 7 14 58 7 8 70.43 73.62 23.24 0 4 3 Whitelist OV-US 16_5 0.62 0 0 0 0.59 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 34 0.03 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 False positive; manually removed OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 4 25688755 183822954 1 27 665 2 11 1 2 11 0 1 26 0 0 26 5 13 33 5 7 70.43 69.45 30.48 0 3 2 Whitelist OV-US 2_5 0.13 1 0 0 0.05 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 43 0.03 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 5 73636560 135974128 3 7 665 2 0 1 0 4 0.3 0.02 18 0 0 18 7 10 39 8 8 70.43 73.51 26.37 0 2 1 Whitelist OV-US 4 0.62 0.08 0 0 0.59 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 10 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 False positive; manually removed OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 6 16954294 41598733 2 6 665 0 0 1 1 4 0.57 0.57 11 0 0 11 7 7 32 7 12 70.43 48.2 51.67 0 3 2 Whitelist OV-US 13 0.93 0.79 0 0 0.64 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 8 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 7 6969499 106923564 4 11 665 0 0 1 3 7 0.11 0.08 23 0 0 23 5 13 39 7 7 70.43 87.5 12.27 0 3 4 Whitelist OV-US 3 0.62 0.24 0 0 0.48 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 15 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 8 23266791 145185294 1 36 665 1 8 0 0 27 0 0.02 34 0 0 34 6 12 35 6 6 70.43 96.36 0.03 0 5 3 Whitelist OV-US 11_12_13_18_3_5 0.62 0.07 0 0 0.02 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 45 0.03 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 9 30879774 94670133 2 5 665 0 0 1 1 3 0.57 0.27 6 0 0 6 3 4 17 4 6 70.43 92.21 7.64 0 3 4 Whitelist OV-US 2 0.62 0.51 0 0 0.64 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 7 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 10 11790441 98909438 1 8 665 2 5 0 0 1 0.02 0.02 17 0 0 17 7 14 19 7 15 70.43 36.15 60.28 0 3 2 Whitelist OV-US 0.54 0.08 0 0 0.33 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 15 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 11 23550499 126101178 1 26 665 0 11 1 2 12 0 0.14 33 0 0 33 5 11 35 5 6 70.43 92.81 6.99 2 3 5 Whitelist OV-US 12_20_8 0.41 0.34 0 0 0.01 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 40 0.03 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 12 1814222 68872525 3 16 665 1 0 1 1 13 0.8 0.2 21 0 0 21 9 15 31 9 9 70.43 42.29 57.62 0 3 4 Whitelist OV-US 11_19_8 0.62 0.42 0 0 0.84 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 19 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 False positive; manually removed OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 13 30648512 112891497 1 22 665 0 7 0 0 15 0 0.39 20 0 0 20 6 7 21 7 8 70.43 99.64 0.36 0 3 4 Whitelist OV-US 15_2_6_8 0.54 0.64 0 0 0.01 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 29 0.02 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 14 23765223 102710696 1 22 665 1 6 0 1 14 0.01 0 28 0 0 28 12 14 29 12 12 70.43 92.34 6.75 0 3 4 Whitelist OV-US 3_4_X 0.62 0.02 0 0 0.21 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 30 0.02 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 15 59890154 98831219 1 10 665 0 6 0 0 4 0 0.72 24 0 0 24 12 19 27 12 22 70.43 12.51 87.39 0 2 3 Whitelist OV-US 6 0.3 0.9 0 0 0.03 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 16 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 16 10805630 88093195 1 15 665 3 8 0 0 4 0 0.28 25 0 0 25 11 13 27 11 15 70.43 80.64 19.27 0 3 4 Whitelist OV-US 3 0.54 0.52 0 0 0.07 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 26 0.02 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 17 4865503 75189371 1 13 665 1 8 0 0 4 0 1 13 0 0 13 8 13 15 8 15 70.43 30.69 68.73 0 2 3 Whitelist OV-US 0.15 1 0 0 0.02 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 22 0.02 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 18 8267017 60831955 1 14 665 0 4 0 0 10 0.01 1 13 0 0 13 6 13 14 7 7 70.43 60.99 38.98 0 3 4 Whitelist OV-US 8_X 0.9 1 0 0 0.16 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 18 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 19 6662156 50125621 1 13 665 1 4 1 0 7 0.11 0.4 12 0 0 12 5 8 15 5 5 70.43 99.81 0 0 4 3 Whitelist OV-US 12_5 0.54 0.65 0 0 0.48 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 19 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 20 9980789 62225666 2 19 665 0 2 2 2 13 0.57 0 13 0 0 13 5 7 16 5 7 70.43 99.67 0 0 7 4 Whitelist OV-US 11_3 0.62 0 0 0 0.64 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 25 0.02 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 21 18866943 18878598 1 1 665 1 0 0 0 0 0.39 0.16 1 0 NA NA NA NA 9 4 6 70.43 50.8 26.55 0 1 NA Whitelist OV-US 0.62 0.37 0 NA 0.59 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 2 0 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 22 49922541 49936702 1 1 665 0 1 0 0 0 0.39 0.04 2 0 NA NA NA NA 5 5 5 70.43 0.05 99.95 0 2 3 Whitelist OV-US 0.62 0.15 0 NA 0.59 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 2 0 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::7dcc809b-e33a-4453-b92a-c00786f48cb0 X 3381817 47155334 3 7 665 0 1 1 1 4 0.8 0.79 12 0 0 12 5 7 29 6 6 70.43 99.76 0.01 0 4 5 Whitelist OV-US 3 0.96 0.94 0 0 0.84 0 No OV-US 7dcc809b-e33a-4453-b92a-c00786f48cb0 OV 0.82 3.31 Ovary-AdenoCA NA 10 0.01 NA 4 OV-US DO30750 TCGA-24-1557 7dcc809b-e33a-4453-b92a-c00786f48cb0 female deceased C56.9 49 1213 NA NA Included Ovary-AdenoCA OV US 1 39.9 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 1 8622852 227102368 2 30 704 1 0 0 1 28 0.57 0.01 56 0 0 56 7 12 65 7 8 72.57 88.27 11.73 0 5 4 Whitelist OV-US 11_19_2_5_9 0.62 0.05 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 2 23974041 152146532 6 28 704 1 2 1 2 22 0.88 0 54 0 0 54 10 11 79 10 10 72.57 88.4 8.91 0 5 4 Whitelist OV-US 1_21_4_8 0.87 0.02 0 0 0.91 0 Linked to high confidence OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA With other complex events 34 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 False positive; manually removed OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 3 129282620 135916251 17 18 704 4 5 4 4 1 0.98 0 12 0 0 12 3 8 74 12 13 72.57 72.9 23.95 0 2 3 Whitelist OV-US 0.99 0 0 0 0.99 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 35 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 4 2551457 170303872 1 16 704 4 5 1 0 6 0.08 0 32 0 0 32 10 12 32 10 15 72.57 67.97 29.65 0 3 2 Whitelist OV-US 1_2 0.54 0 0 0 0.48 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 5 33617055 179167008 1 14 704 1 5 1 1 6 0.11 0.04 19 0 0 19 7 9 23 7 9 72.57 28.8 71.08 0 2 3 Whitelist OV-US 0.49 0.15 0 0 0.48 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 22 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 6 21192197 101774595 7 19 704 0 2 2 3 12 0.44 0.23 31 0 0 31 4 11 43 4 6 72.57 87.09 10.07 6 5 4 Whitelist OV-US 1_16_2_8 0.87 0.47 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 7 140169946 144380346 2 4 704 0 1 0 1 2 0.57 0 2 0 0 NA NA NA 46 8 13 72.57 93.16 4.09 4 3 5 Whitelist OV-US 0.62 0.01 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 8 20677931 137092373 5 20 704 1 1 2 1 15 0.9 0.01 33 0 0 33 5 8 33 5 8 72.57 96.28 0.04 0 4 3 Whitelist OV-US 11_2_20 0.77 0.06 0 0 0.92 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 9 17096807 131815416 1 7 704 3 2 0 0 2 0.14 0.1 9 0 0 9 7 9 15 8 10 72.57 33.01 63.88 0 2 3 Whitelist OV-US 0.62 0.26 0 0 0.59 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 10 113755189 124183402 2 6 704 1 1 0 0 4 0.57 0.01 4 0 0 4 3 4 31 7 12 72.57 83.46 13.07 0 2 1 Whitelist OV-US X 0.62 0.04 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 11 9941489 124824128 1 22 704 1 6 0 0 15 0 0.01 29 0 0 29 5 14 34 5 7 72.57 92.28 7.3 0 5 4 Whitelist OV-US 1_20_8 0.31 0.04 0 0 0.09 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 29 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 12 6347743 132991798 1 27 704 2 7 1 0 17 0.01 0.11 33 0 0 33 4 19 36 4 8 72.57 78.37 17.25 0 4 3 Whitelist OV-US 1_11_5 0.62 0.28 0 0 0.19 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 37 0.03 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 13 78042876 95729646 2 8 704 0 0 1 1 6 0.57 0.53 7 0 0 7 3 5 29 7 7 72.57 60.88 38.35 0 2 3 Whitelist OV-US 19 0.87 0.77 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 14 43387409 43444118 2 2 704 0 0 1 1 0 0.57 0.28 2 0 0 NA NA NA 18 10 10 72.57 99.06 0.03 0 2 3 Whitelist OV-US 0.68 0.52 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 15 64308064 93896043 2 4 704 1 1 0 0 2 0.57 0.42 10 0 0 10 4 7 21 4 7 72.57 72.62 27.26 0 3 5 Whitelist OV-US 0.54 0.67 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 16 4412978 88870302 1 22 704 1 9 0 0 12 0 0.01 26 0 0 26 7 10 29 7 7 72.57 94.34 0 0 5 4 Whitelist OV-US 20 0.04 0.04 0 0 0.01 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 17 2251275 65114856 1 8 704 0 3 0 0 5 0.03 0.04 7 0 0 7 3 5 7 3 5 72.57 71.45 28.53 0 2 4 Whitelist OV-US 0.54 0.13 0 0 0.33 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 18 330882 27585658 1 6 704 1 1 1 0 3 0.8 0.08 7 0 0 7 3 5 10 3 4 72.57 86.01 9.34 0 4 1 Whitelist OV-US 0.62 0.22 0 0 0.84 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 19 8187825 42588219 1 18 704 0 3 1 1 13 0.28 0.02 17 0 0 17 10 14 21 10 10 72.57 45.67 54.16 0 5 6 Whitelist OV-US 1_2 0.54 0.08 0 0 0.59 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 23 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 20 314995 46999237 5 26 704 4 3 1 2 16 0.57 0 39 0 0 39 10 13 55 10 10 72.57 67.67 24.76 3 4 3 Whitelist OV-US 16_19 0.68 0 0 0 0.64 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 36 0.03 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 False positive; manually removed OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 21 18052703 29183847 5 8 704 1 2 1 1 3 0.9 0 15 0 0 15 11 15 25 11 11 72.57 50.84 26.22 0 2 1 Whitelist OV-US 2 1 0.01 0 0 0.92 0 High confidence OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA Canonical without polyploidization 13 0.01 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f 22 37772946 40985179 1 2 704 0 2 0 0 0 0.11 0.03 1 0 0 NA NA NA 6 5 5 72.57 100 0 0 4 NA Whitelist OV-US 0.54 0.12 0 0 0.48 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::8a6d2ce3-cc57-451b-9b07-8263782aa23f X 19001646 119558639 1 17 704 4 5 0 0 8 0.03 0.23 27 0 0 27 9 27 33 9 9 72.57 52.25 44.37 0 2 3 Whitelist OV-US 0.54 0.46 0 0 0.33 0 No OV-US 8a6d2ce3-cc57-451b-9b07-8263782aa23f OV 0.76 3.3 Ovary-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578463_G_C,CN:2 4 OV-US DO32596 TCGA-23-1124 8a6d2ce3-cc57-451b-9b07-8263782aa23f female deceased C56.9 62 1768 NA NA Included Ovary-AdenoCA OV US 1 58.16 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 1 19955104 236011594 1 5 163 1 4 0 0 0 0.04 0.11 9 0 0 9 3 5 10 3 4 80.5 100 0 0 4 6 Whitelist OV-US 0.45 0.28 0 0 0.36 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 10 0.03 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 2 28655498 216573116 1 11 163 4 5 0 0 2 0.03 1 14 0 0 14 9 14 15 9 9 80.5 99.03 0.88 0 3 4 Whitelist OV-US 0.27 1 0 0 0.33 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 20 0.06 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 3 116117199 116544879 3 3 163 1 0 1 1 0 0.8 0.54 4 0 0 4 4 4 13 5 10 80.5 96.84 0 0 4 5 Whitelist OV-US 0.87 0.77 0 0 0.84 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 6 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 4 74080130 186324717 1 3 163 2 1 0 0 0 0.3 0.16 6 0 0 6 3 5 8 4 6 80.5 3.93 95.96 1 2 1 Whitelist OV-US 0.62 0.36 0 0 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 6 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 5 72205804 72278856 1 1 163 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 80.5 97.33 0 0 3 4 Whitelist OV-US 0.62 0 NA NA 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 2 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 6 31537908 147426097 1 3 163 0 2 1 0 0 0.3 0.07 2 0 0 NA NA NA NA NA NA 80.5 94.94 4.9 1 2 3 Whitelist OV-US 0.62 0.2 0 0 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 6 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 7 105544239 105928944 3 3 163 1 2 0 0 0 0.3 0.04 4 0 0 4 0 3 12 4 5 80.5 99.71 0.07 0 3 4 Whitelist OV-US 0.62 0.13 0 0 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 6 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 8 8628222 110442069 1 3 163 0 2 0 0 1 0.11 0.15 6 0.53 0 6 6 6 8 8 8 80.5 99.99 0 0 3 4 Whitelist OV-US 0.62 0.35 0.53 0 0.48 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 5 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 9 116804088 117109006 1 1 163 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 80.5 99.33 0 0 3 4 Whitelist OV-US 0.62 0.09 NA NA 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 2 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 10 72535851 116568901 1 5 163 0 5 0 0 0 0 0.45 9 0 0 9 4 6 10 5 7 80.5 99.82 0 0 4 5 Whitelist OV-US 0.1 0.7 0 0 0.07 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 10 0.03 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 11 65629752 65760531 2 2 163 0 2 0 0 0 0.11 0.85 1 0 0 NA NA NA 6 4 4 80.5 99.57 0 0 3 NA Whitelist OV-US 0.54 0.99 0 0 0.48 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 4 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 12 52953503 99753221 1 6 163 1 3 0 0 2 0.11 0.71 10 0 0 10 8 10 11 9 9 80.5 99.69 0.23 0 4 5 Whitelist OV-US 0.54 0.9 0 0 0.48 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 10 0.03 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 13 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 14 32715658 69669235 1 2 163 0 2 0 0 0 0.11 0.25 4 NA 0 4 4 4 6 6 6 80.5 84.09 0 0 3 4 Whitelist OV-US 0.54 0.5 NA 0 0.48 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 4 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 15 40373481 76860738 1 4 163 2 2 0 0 0 0.26 1 5 0 0 5 3 5 5 3 5 80.5 98.26 1.65 0 3 1 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 8 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 16 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 17 1058081 42353724 1 2 163 0 2 0 0 0 0.11 0.63 4 0 0.04 4 4 4 6 6 6 80.5 46.12 53.38 0 2 3 Whitelist OV-US 0.54 0.84 0 0.04 0.48 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 4 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 18 36806008 47795583 1 2 163 1 1 0 0 0 0.57 0.33 3 NA 0 NA NA NA NA NA NA 80.5 0.53 99.44 0 2 3 Whitelist OV-US 0.68 0.59 NA 0 0.64 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 4 0.01 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 19 14465820 33816769 8 8 163 2 3 2 1 0 0.8 0 18 0 0 18 5 6 32 6 6 80.5 91.02 1.44 6 6 4 Whitelist OV-US 0.87 0 0 0 0.84 0 Low confidence OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA With other complex events 16 0.05 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 20 85330 26233761 52 52 163 12 16 13 11 0 0.78 0 72 0 0 72 5 9 72 5 9 80.5 93.65 0 30 10 11 Whitelist OV-US 0.87 0 0 0 0.84 0 Low confidence OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA With other complex events 104 0.32 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 21 NA NA 0 0 163 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 22 NA NA 0 0 163 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.69 NA NA NA 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::90f4b65c-cfd4-4066-a5b9-842885c172e2 X 119465473 141243889 3 3 163 1 0 1 1 0 0.8 1 6 0 0 6 6 6 14 14 14 80.5 99.77 0 0 3 4 Whitelist OV-US 0.87 1 0 0 0.84 0 No OV-US 90f4b65c-cfd4-4066-a5b9-842885c172e2 OV 0.85 3.35 Ovary-AdenoCA NA 6 0.02 stopgain;nonsynonymous_SNV,17_7573982_A_C;17_7573983_A_C,CN:2 4 OV-US DO28823 TCGA-13-0727 90f4b65c-cfd4-4066-a5b9-842885c172e2 female deceased C56.9 71 462 NA NA Included Ovary-AdenoCA OV US 1 15.2 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 1 35578020 200736082 1 15 307 6 0 0 0 9 0 0.11 13 0 0 13 7 12 23 7 7 66.14 81.92 18.08 0 3 2 Whitelist OV-US 3_4 0.62 0.29 0 0 0.03 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 2 17848283 242634308 1 22 307 4 0 1 1 16 0.11 0.04 11 0 0 11 9 9 16 9 9 66.14 94.72 5.19 0 3 2 Whitelist OV-US 11 0.76 0.14 0 0 0.48 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 28 0.05 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 3 48623513 195454936 1 12 307 3 0 0 0 9 0.03 0.91 17 0 0 17 10 10 20 11 12 66.14 90.74 9.22 0 4 3 Whitelist OV-US 1_5 0.68 1 0 0 0.33 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 4 8534976 179435156 1 16 307 7 0 0 0 9 0 1 20 0 0 20 7 13 22 7 10 66.14 27.29 70.18 0 2 1 Whitelist OV-US 1 0.62 1 0 0 0.01 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 5 5843910 139310448 1 13 307 1 0 0 1 11 0.57 1 7 0 0 7 7 7 8 7 7 66.14 39.91 57.42 0 3 2 Whitelist OV-US 12_3 0.62 1 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 6 12314942 169158984 1 19 307 8 1 0 1 9 0 0.07 26 0 0 26 5 13 27 5 8 66.14 93.71 6.16 0 4 5 Whitelist OV-US 12 0.62 0.21 0 0 0.05 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 29 0.05 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 7 90167727 158834567 3 5 307 1 1 1 0 2 0.8 0.9 3 0 0 NA NA NA 9 3 4 66.14 82.41 17.38 0 3 2 Whitelist OV-US 11 0.68 1 0 0 0.84 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 8 12703636 144676528 1 27 307 6 0 1 0 20 0 0 15 0 0 15 7 15 15 7 7 66.14 99.99 0 0 4 3 Whitelist OV-US 12 0.84 0 0 0 0.09 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 34 0.06 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 9 139532561 139562276 2 2 307 0 0 1 1 0 0.57 0.37 2 0 0 NA NA NA 9 4 4 66.14 56.76 42.54 0 1 2 Whitelist OV-US 0.68 0.63 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 10 35269238 77198893 2 2 307 0 0 1 1 0 0.57 0.07 1 0 0 NA NA NA 12 3 5 66.14 75.1 24.75 0 4 NA Whitelist OV-US 0.68 0.22 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 11 32497677 128099675 1 10 307 5 1 1 0 3 0.04 0 11 0 0 11 7 11 20 7 7 66.14 78.09 18.23 0 3 2 Whitelist OV-US 0.62 0 0 0 0.38 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 12 7037925 128974115 1 13 307 5 0 0 0 8 0 0.22 10 0 0 10 6 10 11 7 11 66.14 85.22 14.69 0 3 2 Whitelist OV-US 5_6 0.62 0.45 0 0 0.07 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 13 59849667 109131114 6 12 307 0 1 3 2 6 0.34 0 7 0 0 7 3 6 9 3 7 66.14 52.18 47.82 0 5 3 Whitelist OV-US 0.68 0.01 0 0 0.59 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 14 NA NA 0 0 307 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.34 0 NA NA 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 15 NA NA 0 0 307 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.17 NA NA NA 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 16 11029895 89452132 1 7 307 1 0 2 1 3 0.57 0.11 10 0 0 10 3 9 11 3 3 66.14 94.58 0.39 0 3 4 Whitelist OV-US 0.68 0.28 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 17 43105206 76917676 2 3 307 1 0 1 0 1 0.57 0.21 7 0 0 7 3 6 14 4 4 66.14 39.05 60.54 0 5 3 Whitelist OV-US 0.87 0.44 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 18 20212997 66292715 1 7 307 3 0 0 0 4 0.03 0.21 3 0 0 NA NA NA 6 6 6 66.14 99.6 0 0 3 4 Whitelist OV-US 1_8 0.54 0.44 0 0 0.33 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 19 4515341 54481140 1 7 307 3 0 0 0 4 0.03 0.06 10 0 0 10 5 5 11 5 5 66.14 81.09 11.63 0 3 2 Whitelist OV-US 0.62 0.18 0 0 0.33 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 20 15471161 61078302 4 14 307 2 0 1 1 10 0.57 0 8 0 0 8 4 8 9 4 8 66.14 99.04 0 0 7 5 Whitelist OV-US 11_2_8 0.98 0 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 21 NA NA 0 0 307 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.94 0 NA NA 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 22 NA NA 0 0 307 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.52 NA NA NA 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::9fb1ba57-2007-4477-b000-2d36f163efd2 X 121608036 143228298 2 4 307 0 0 1 1 2 0.57 0.69 1 0 0 NA NA NA 9 9 9 66.14 35.53 64.2 0 2 NA Whitelist OV-US 1 0.89 0 0 0.64 0 No OV-US 9fb1ba57-2007-4477-b000-2d36f163efd2 OV 0.95 3.09 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578403_T_C,CN:2 3 OV-US DO29398 TCGA-23-1110 9fb1ba57-2007-4477-b000-2d36f163efd2 female alive C56.9 42 NA 1658 NA Included Ovary-AdenoCA OV US 0 54.54 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 1 40380845 89367678 3 7 303 1 1 0 1 4 0.8 0.92 9 0 0 9 5 9 19 5 5 39.28 14.98 85.02 0 2 3 Whitelist OV-US 0.96 1 0 0 0.84 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 2 42494654 218371147 1 12 303 2 6 0 0 4 0.01 0.92 20 0 0 20 15 20 23 15 15 39.28 16.1 83.81 0 2 3 Whitelist OV-US 1_3 0.54 1 0 0 0.16 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 3 4388845 136404030 1 12 303 0 6 0 0 6 0 0.65 20 0 0 20 10 10 23 11 11 39.28 33.36 66.5 0 2 3 Whitelist OV-US 8 0.62 0.86 0 0 0.03 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 4 30207518 105576012 8 14 303 2 1 3 2 6 0.8 0.01 10 0 0 10 7 10 15 7 7 39.28 63.15 33.83 0 2 3 Whitelist OV-US 14 0.9 0.03 0 0 0.84 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 22 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 False positive; manually removed OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 5 75339110 77642610 2 2 303 0 0 1 1 0 0.57 0.23 3 0 0 NA NA NA 24 8 8 39.28 56.21 43.65 0 1 2 Whitelist OV-US 0.68 0.47 0 0 0.64 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 6 6714987 149995792 2 14 303 0 0 2 2 10 0.26 0.18 12 0 0 12 4 5 16 4 6 39.28 41.7 58.15 0 2 1 Whitelist OV-US 0.62 0.4 0 0 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 7 11221583 24771722 2 2 303 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 28 6 7 39.28 67.01 32.77 0 1 2 Whitelist OV-US 0.68 0.03 0 0 0.64 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 8 37341963 123034944 1 14 303 1 2 2 2 7 0.93 0 16 0 0 16 5 6 21 5 7 39.28 57.88 42.11 1 6 3 Whitelist OV-US 3 0.98 0.01 0 0 0.95 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 9 86423945 135994657 1 5 303 0 4 0 0 1 0.01 0.66 10 0 0 10 10 10 13 11 11 39.28 13.01 86.86 0 2 3 Whitelist OV-US 0.1 0.87 0 0 0.16 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 10 27574658 123961254 1 11 303 0 4 1 0 6 0.04 0.1 12 0 0 12 6 12 13 7 7 39.28 12.06 87.76 0 2 3 Whitelist OV-US 0.54 0.26 0 0 0.36 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 11 62594300 62620052 1 1 303 0 1 0 0 0 0.39 0.89 1 0 NA NA NA NA 5 3 3 39.28 27.81 71.63 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 12 53986194 53996560 1 1 303 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 4 4 4 39.28 26.63 73.29 0 2 NA Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 13 45088344 93084390 1 4 303 0 2 0 0 2 0.11 0.63 6 0 0 6 4 6 6 4 4 39.28 52.47 47.53 0 2 1 Whitelist OV-US 0.54 0.85 0 0 0.48 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 14 52205312 99240507 1 6 303 0 3 0 0 3 0.03 0.87 6 0 0 6 5 6 7 6 6 39.28 34.41 64.99 0 3 4 Whitelist OV-US 4 0.54 1 0 0 0.33 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 15 26448189 81593496 1 6 303 0 3 0 0 3 0.03 0.01 4 0 0 4 4 4 7 4 4 39.28 23.6 76.3 0 2 3 Whitelist OV-US 8 0.25 0.06 0 0 0.33 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 16 30615784 56518221 3 4 303 0 1 1 1 1 0.8 0.15 4 0 0 4 3 4 13 8 8 39.28 44.45 55.23 0 2 1 Whitelist OV-US 1 0.36 0 0 0.84 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 17 20646823 47300975 1 6 303 0 2 0 0 4 0.11 0.48 3 0 0 NA NA NA 4 4 4 39.28 58.95 41.05 0 1 2 Whitelist OV-US 0.68 0.72 0 0 0.48 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 18 32464722 32475995 1 1 303 0 1 0 0 0 0.39 0.59 2 0 NA NA NA NA 12 5 5 39.28 92.29 1.82 0 3 4 Whitelist OV-US 0.62 0.81 0 NA 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 19 24573718 39561163 1 6 303 0 2 0 0 4 0.11 0 1 0 0 NA NA NA NA NA NA 39.28 39.2 60.63 0 2 NA Whitelist OV-US 2 0.68 0.02 0 0 0.48 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 20 2216983 50460124 1 8 303 1 5 0 0 2 0.01 0.02 3 0 0 NA NA NA 6 3 3 39.28 18.21 80.81 0 2 1 Whitelist OV-US 8 0.21 0.07 0 0 0.19 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 21 38083965 38106635 1 1 303 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 39.28 31.34 46.01 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 22 37183183 37210977 1 1 303 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 39.28 59.2 40.8 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::a5030259-cf9c-4a58-8710-b9da8ee59320 X 4199254 56948098 1 6 303 1 1 0 0 4 0.57 0.9 7 0 0 7 4 6 10 4 4 39.28 86.88 9.73 0 3 2 Whitelist OV-US 4 0.93 1 0 0 0.64 0 No OV-US a5030259-cf9c-4a58-8710-b9da8ee59320 OV 0.89 1.94 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 OV-US DO28233 TCGA-10-0937 a5030259-cf9c-4a58-8710-b9da8ee59320 female deceased C56.9 44 608 NA NA Included Ovary-AdenoCA OV US 1 20 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 1 41457086 165698833 1 10 204 0 2 2 1 5 0.53 0.79 19 0 0 19 3 4 22 3 4 70.2 82.7 17.3 1 4 3 Whitelist OV-US 0.68 0.95 0 0 0.64 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 2 79568803 221828285 1 3 204 2 1 0 0 0 0.3 0 7 0 0 7 4 7 8 4 4 70.2 99.87 0.02 0 4 3 Whitelist OV-US 0.62 0.01 0 0 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 3 31732688 169149266 1 4 204 3 0 0 0 1 0.03 0.1 10 0 0 10 6 10 12 6 6 70.2 96.77 0.09 0 4 3 Whitelist OV-US 0.54 0.26 0 0 0.33 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 4 90713688 91220780 2 2 204 0 0 1 1 0 0.57 0.4 4 0 0 4 4 4 15 6 6 70.2 64 33.15 2 2 3 Whitelist OV-US 0.68 0.65 0 0 0.64 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 5 14089767 14128949 1 1 204 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA 7 3 3 70.2 43.93 53.41 0 3 4 Whitelist OV-US 0.62 0.08 0 NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 6 70530213 103267166 2 10 204 0 2 0 0 8 0.11 0.18 12 0 0 12 3 6 22 8 8 70.2 66.42 33.44 9 3 4 Whitelist OV-US 0.62 0.4 0 0 0.48 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 7 75372235 75646100 3 5 204 0 1 0 2 2 0.3 0.75 1 0 0 NA NA NA 8 5 5 70.2 99.93 0 0 8 NA Whitelist OV-US 0.93 0.92 0 0 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 8 29488947 40948299 5 13 204 4 1 0 0 8 0.04 0.08 17 0 0 17 9 9 22 11 11 70.2 81.18 18.71 0 2 1 Whitelist OV-US 0.62 0.23 0 0 0.36 1 High confidence OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA With other complex events 18 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 9 NA NA 0 0 204 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.03 NA NA NA 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 10 5404879 38299160 3 19 204 0 2 1 0 16 0.3 0 22 0 0 22 3 5 25 3 4 70.2 76.05 20.6 0 3 4 Whitelist OV-US 0.81 0 0 0 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 11 22037502 29122951 5 7 204 1 1 1 2 2 0.9 0 7 0 0 7 3 3 25 5 5 70.2 76.56 19.23 0 3 2 Whitelist OV-US 0.62 0.01 0 0 0.92 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 12 100471828 100684614 1 1 204 1 0 0 0 0 0.39 0.51 2 0 NA NA NA NA NA NA NA 70.2 99.92 0 0 4 5 Whitelist OV-US 0.62 0.75 0 NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 13 44602468 44710910 2 3 204 0 1 0 1 1 0.57 1 3 0 0 NA NA NA 11 4 4 70.2 78.48 18 0 2 4 Whitelist OV-US 0.62 1 0 0 0.64 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 14 NA NA 0 0 204 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.09 NA NA NA 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 15 NA NA 0 0 204 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 16 16849159 89445229 1 10 204 1 0 3 1 5 0.28 0 16 0 0 16 3 9 23 3 9 70.2 50.11 43.81 0 2 3 Whitelist OV-US 0.68 0 0 0 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 17 1745519 2371008 1 1 204 1 0 0 0 0 0.39 0.51 2 0.26 NA NA NA NA 7 3 4 70.2 32.29 67.19 0 2 3 Whitelist OV-US 0.62 0.75 0.26 NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 18 20018864 37634063 1 1 204 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 6 4 4 70.2 20.54 73.66 0 2 4 Whitelist OV-US 0.62 0.16 NA NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 19 9540512 45641579 33 61 204 10 11 8 4 28 0.32 0 78 0 0 78 3 7 81 3 4 70.2 63.85 28.87 10 5 6 Whitelist OV-US 8 0.85 0 0 0 0.59 1 Linked to high confidence OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA With other complex events 94 0.23 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 20 32639005 43492743 1 2 204 1 1 0 0 0 0.57 0.34 1 NA 0 NA NA NA NA NA NA 70.2 92.88 0 0 4 NA Whitelist OV-US 0.68 0.59 NA 0 0.64 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 21 20386576 26042423 1 1 204 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 5 3 3 70.2 65.6 11.75 0 2 3 Whitelist OV-US 0.62 0.76 NA NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 22 18879966 41753417 1 4 204 1 1 0 1 1 0.8 0.04 7 0 0 7 7 7 9 8 9 70.2 46.93 53.07 0 3 2 Whitelist OV-US 0.68 0.13 0 0 0.84 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::ba68f2cf-9271-41fd-9655-1fac7681f588 X 53890386 53996441 1 1 204 1 0 0 0 0 0.39 0.87 1 0 NA NA NA NA 8 6 6 70.2 11.87 87.9 0 3 NA Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US ba68f2cf-9271-41fd-9655-1fac7681f588 OV 0.89 3.23 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:4 4 OV-US DO30060 TCGA-24-1558 ba68f2cf-9271-41fd-9655-1fac7681f588 female deceased C56.9 73 594 NA NA Included Ovary-AdenoCA OV US 1 19.54 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 1 45234936 174574010 1 5 283 2 3 0 0 0 0.14 0.05 15 0 0 15 8 15 20 12 12 79.32 99.94 0.06 0 3 4 Whitelist OV-US 0.62 0.15 0 0 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 2 24054784 217193686 1 6 283 1 3 0 0 2 0.11 0 2 0 0 NA NA NA NA NA NA 79.32 99.88 0 0 3 4 Whitelist OV-US 11 0.68 0.01 0 0 0.48 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 3 15395276 169948382 1 18 283 3 3 0 1 11 0.28 0.16 17 0 0 17 5 10 19 5 5 79.32 99.88 0 0 4 3 Whitelist OV-US 8 0.64 0.37 0 0 0.59 1 Linked to high confidence OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA With other complex events 25 0.04 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 4 3142975 185752325 1 21 283 4 5 1 0 11 0.08 0.07 22 0 0 22 4 10 22 4 5 79.32 76.41 20.81 0 4 5 Whitelist OV-US 3_6 0.62 0.21 0 0 0.48 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 31 0.05 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 5 13995081 161235368 1 9 283 1 7 0 0 1 0 0.46 15 0 0 15 13 14 19 15 15 79.32 99.85 0 0 4 5 Whitelist OV-US 0.15 0.7 0 0 0.04 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 6 53357622 152036319 1 10 283 0 4 0 0 6 0.01 0.26 8 0 0 8 4 8 10 6 6 79.32 85.56 14.26 0 2 3 Whitelist OV-US 0.24 0.5 0 0 0.16 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 7 124503390 145173340 1 4 283 1 2 0 0 1 0.3 0.02 3 0 0 NA NA NA 4 3 3 79.32 14.8 84.99 0 1 2 Whitelist OV-US 0.68 0.1 0 0 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 8 8571303 145086772 67 77 283 19 18 15 15 10 0.86 0 117 0 0 117 7 14 117 7 8 79.32 77.15 19.42 73 5 6 Whitelist OV-US 3 0.75 0 0 0 0.9 1 High confidence OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA With other complex events 144 0.25 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 9 99458882 99490664 1 1 283 0 1 0 0 0 0.39 0.44 2 0 NA NA NA NA 5 4 4 79.32 99.86 0 0 4 5 Whitelist OV-US 0.62 0.69 0 NA 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 10 32809526 132235931 1 8 283 3 2 0 0 3 0.14 0.78 11 0 0 11 6 11 13 8 8 79.32 99.82 0 0 3 4 Whitelist OV-US 0.62 0.93 0 0 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 11 31290275 116873007 1 11 283 1 4 2 2 2 0.55 0.26 7 0 0 7 5 7 10 6 6 79.32 99.46 0.01 0 4 5 Whitelist OV-US 0.74 0.5 0 0 0.64 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 12 NA NA 0 0 283 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.37 0 NA NA 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 13 49228433 103426671 1 6 283 0 5 0 0 1 0 0.26 15 0 0 15 11 15 18 12 12 79.32 100 0 0 5 4 Whitelist OV-US 0.04 0.5 0 0 0.07 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 14 27872132 61388415 1 6 283 2 1 0 0 3 0.3 1 2 0 0 NA NA NA NA NA NA 79.32 99.09 0 0 3 4 Whitelist OV-US 0.54 1 0 0 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 15 79297823 81177204 1 2 283 0 2 0 0 0 0.11 0.71 2 0 0 NA NA NA 8 5 6 79.32 73.86 26.14 0 3 4 Whitelist OV-US 0.54 0.9 0 0 0.48 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 16 NA NA 0 0 283 0 0 0 0 0 NA 0.71 NA 0 NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.9 0 NA NA 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 17 79114017 79147745 1 1 283 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA 8 3 3 79.32 55.24 44.76 0 4 5 Whitelist OV-US 0.62 0.19 0 NA 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 18 NA NA 0 0 283 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 1 0 NA NA 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 19 3323910 38725804 1 4 283 1 0 0 1 2 0.57 0.03 3 0 0.01 NA NA NA 7 3 3 79.32 61.14 38.69 0 1 2 Whitelist OV-US 0.68 0.11 0 0.01 0.64 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 20 13055431 37489723 1 2 283 2 0 0 0 0 0.11 0.84 2 0 0 NA NA NA NA NA NA 79.32 99.03 0 0 3 4 Whitelist OV-US 0.54 0.98 0 0 0.48 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 21 NA NA 0 0 283 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-US NA 1 NA NA NA 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d 22 42174702 42188475 1 1 283 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 79.32 0 100 0 2 NA Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c435627c-159d-4a6d-a819-30abac24bf4d X 71392825 104552833 1 2 283 0 0 0 1 1 0.39 0.79 2 0 0 NA NA NA 5 3 3 79.32 59.19 37.42 0 4 5 Whitelist OV-US 0.68 0.94 0 0 0.59 1 No OV-US c435627c-159d-4a6d-a819-30abac24bf4d OV 0.94 3.57 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577539_C_G,CN:2 4 OV-US DO28521 TCGA-25-1632 c435627c-159d-4a6d-a819-30abac24bf4d female deceased C56.9 68 1799 NA NA Included Ovary-AdenoCA OV US 1 59.18 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 1 10695525 183023208 1 16 122 3 5 0 1 7 0.09 0 17 0 0 17 11 13 18 11 13 47.19 18.31 81.69 0 2 3 Whitelist OV-US 6 0.62 0.01 0 0 0.48 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 25 0.1 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 2 109856407 142113221 1 4 122 2 2 0 0 0 0.26 1 8 0 0 8 5 8 13 5 5 47.19 0.5 99.4 0 2 1 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 3 116652636 175589681 1 4 122 3 1 0 0 0 0.11 1 8 0 0 8 3 6 10 3 3 47.19 47.74 52.09 0 3 0 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 4 1745422 2171995 1 1 122 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 47.19 99.76 0.22 0 1 2 Whitelist OV-US 0.62 0.02 NA NA 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 5 NA NA 0 0 122 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.04 NA NA NA 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 6 131091451 150945233 2 2 122 0 0 1 1 0 0.57 0.02 4 0 0 4 4 4 15 5 5 47.19 87.59 12.24 0 1 2 Whitelist OV-US 0.68 0.08 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 7 92001478 117571746 1 3 122 0 3 0 0 0 0.03 0.84 6 0 0 6 6 6 8 7 7 47.19 0.98 98.82 0 2 3 Whitelist OV-US 0.41 0.98 0 0 0.33 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 8 13159871 145696472 1 7 122 0 1 1 0 5 0.57 0.68 5 0 0 5 4 5 6 5 5 47.19 26.44 73.1 0 1 2 Whitelist OV-US 0.96 0.88 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 9 75890205 75982751 1 1 122 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 47.19 99.81 0 0 1 NA Whitelist OV-US 0.62 0.26 NA NA 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 10 16311312 114820035 1 7 122 2 4 0 0 1 0.06 0.08 13 0 0 13 4 13 17 4 4 47.19 5.33 94.49 0 3 2 Whitelist OV-US 0.41 0.22 0 0 0.48 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 11 30218030 30822669 7 7 122 0 3 2 2 0 0.44 0 2 0 0 NA NA NA 13 11 11 47.19 2.7 96.87 0 2 3 Whitelist OV-US 0.68 0.02 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 12 28899781 28918079 2 2 122 0 0 1 1 0 0.57 0.08 2 0 0 NA NA NA 10 5 5 47.19 44.99 54.93 0 1 2 Whitelist OV-US 0.68 0.23 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 13 NA NA 0 0 122 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.69 NA NA NA 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 14 64922824 65585664 1 2 122 0 1 0 1 0 0.57 0.06 5 0 0 5 3 5 11 5 5 47.19 49.28 49.8 0 2 1 Whitelist OV-US 0.68 0.19 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 15 87998513 88024514 1 1 122 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 47.19 99.88 0.03 0 1 2 Whitelist OV-US 0.62 0.93 NA NA 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 16 26231531 26335616 2 2 122 0 0 1 1 0 0.57 0.57 1 0 0 NA NA NA NA NA NA 47.19 99.91 0 0 1 NA Whitelist OV-US 0.68 0.8 0 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 17 77944338 78434739 1 1 122 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 7 7 7 47.19 98.26 1.74 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 18 51109567 63509497 1 1 122 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 4 3 3 47.19 27.92 72.04 0 1 2 Whitelist OV-US 0.62 0.93 NA NA 0.59 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 19 12129573 37151345 1 4 122 4 0 0 0 0 0.01 0 12 0 0 12 5 5 16 5 5 47.19 79.48 13.25 6 4 2 Whitelist OV-US 0.21 0 0 0 0.16 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 20 34135696 35322869 2 2 122 0 2 0 0 0 0.11 0.19 4 0 0 4 3 4 7 4 4 47.19 2.26 96.77 0 3 2 Whitelist OV-US 0.54 0.42 0 0 0.48 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 21 23839811 44747874 1 3 122 0 2 0 0 1 0.11 0.19 5 NA 0 5 4 5 6 4 4 47.19 16.94 60.42 0 1 2 Whitelist OV-US 0.62 0.41 NA 0 0.48 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 22 NA NA 0 0 122 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c8febeef-8e7e-459e-88cb-8086692dc559 X 100046647 148318577 1 2 122 1 1 0 0 0 0.57 0.1 3 NA 0 NA NA NA NA NA NA 47.19 99.66 0.11 0 1 2 Whitelist OV-US 0.68 0.26 NA 0 0.64 0 No OV-US c8febeef-8e7e-459e-88cb-8086692dc559 OV 0.9 1.63 Ovary-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577114_T_C,CN:1 2 OV-US DO28004 TCGA-13-1491 c8febeef-8e7e-459e-88cb-8086692dc559 female deceased C56.9 55 1595 NA NA Included Ovary-AdenoCA OV US 1 52.47 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 1 22012754 22205190 3 7 377 0 2 0 1 4 0.3 0.02 7 0 0 7 5 7 42 7 12 57.85 92.04 7.91 0 3 2 Whitelist OV-US 7 0.77 0.09 0 0 0.59 0 Linked to high confidence OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA Canonical without polyploidization 10 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 2 18960070 230123604 3 5 377 0 1 1 1 2 0.8 0.31 31 0 0 31 8 24 42 8 12 57.85 95.83 1.33 0 3 4 Whitelist OV-US 0.93 0.56 0 0 0.84 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 3 60689660 117082675 2 9 377 4 2 0 0 3 0.06 0.03 25 0 0 25 11 12 55 11 11 57.85 53.91 42.96 0 3 4 Whitelist OV-US 4 0.54 0.1 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 4 57600214 135745409 1 4 377 0 1 1 0 2 0.57 0 6 0 0 6 5 6 10 5 6 57.85 0.7 99.27 0 2 3 Whitelist OV-US 3 0.68 0 0 0 0.64 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 5 36680661 154164663 1 16 377 4 6 0 0 6 0.01 0.52 18 0 0 18 5 12 22 5 5 57.85 74.86 25.03 0 3 4 Whitelist OV-US 0.16 0.76 0 0 0.23 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 26 0.03 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 6 33654943 33759274 2 2 377 0 2 0 0 0 0.11 0.01 4 0 0 4 0 3 48 8 9 57.85 97.1 2.66 0 3 4 Whitelist OV-US 0.54 0.05 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 7 4928123 5061333 3 4 377 0 1 1 1 1 0.8 0.21 4 0 0 4 4 4 25 10 10 57.85 61.62 35.83 0 2 3 Whitelist OV-US 0.68 0.43 0 0 0.84 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 8 82033059 82272208 2 2 377 0 2 0 0 0 0.11 1 4 0 0 4 3 4 36 5 5 57.85 93.41 3.17 0 4 3 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 9 139130822 139276378 2 2 377 0 1 1 0 0 0.57 0.79 3 0 0 NA NA NA 18 11 11 57.85 4.28 95.05 0 2 3 Whitelist OV-US 0.68 0.94 0 0 0.64 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 10 5947765 126824225 1 8 377 3 3 0 0 2 0.11 0.04 12 0 0 12 5 12 13 5 5 57.85 99.68 0.14 0 3 4 Whitelist OV-US 0.54 0.13 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 11 40526511 125429660 5 12 377 1 1 2 1 7 0.9 0 35 0 0 35 10 18 59 10 20 57.85 41.58 58 0 3 2 Whitelist OV-US 0.93 0 0 0 0.92 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 False positive; manually removed OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 12 124781530 125362164 2 2 377 0 2 0 0 0 0.11 0.9 4 0 0 4 3 4 26 7 9 57.85 99.75 0.17 0 4 3 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 13 36723885 99180680 1 4 377 3 0 0 0 1 0.03 0.01 4 0 0 4 4 4 5 5 5 57.85 0.32 99.68 0 1 2 Whitelist OV-US 0.54 0.03 0 0 0.33 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 14 35772705 75618399 1 4 377 0 4 0 0 0 0.01 0.04 8 0 0 8 8 8 9 9 9 57.85 1.9 97.19 0 2 3 Whitelist OV-US 0.21 0.13 0 0 0.16 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 15 43625351 94532851 1 4 377 0 4 0 0 0 0.01 0.35 12 0 0 12 12 12 15 15 15 57.85 5.83 94.06 0 2 3 Whitelist OV-US 0.21 0.6 0 0 0.16 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 16 288679 70722744 1 18 377 0 4 0 0 14 0.01 0.01 14 0 0 14 4 7 15 5 5 57.85 72.24 27.66 0 3 2 Whitelist OV-US 17 0.62 0.04 0 0 0.16 0 Linked to high confidence OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA With other complex events 22 0.03 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 17 48309481 79654739 5 28 377 1 2 0 2 23 0.53 0 30 0 0 30 7 10 60 7 7 57.85 66.57 32.48 0 4 3 Whitelist OV-US 1_16_2 0.9 0 0 0 0.64 0 High confidence OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA With other complex events 33 0.04 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 18 681610 705733 1 1 377 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 57.85 0 99.96 0 2 NA Whitelist OV-US 0.62 0 NA NA 0.59 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 19 15400892 45858832 1 7 377 1 3 1 0 2 0.28 0.01 15 0 0 15 6 10 22 6 10 57.85 58.17 34.23 0 3 2 Whitelist OV-US 0.62 0.06 0 0 0.59 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 20 32865921 35201646 2 8 377 0 2 1 1 4 0.57 0 10 0 0 10 4 10 25 5 7 57.85 92.65 0.14 0 4 3 Whitelist OV-US 0.62 0 0 0 0.64 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 21 18860402 35752868 1 4 377 0 4 0 0 0 0.01 0.24 8 0 0 8 8 8 12 11 11 57.85 5.06 65.38 0 2 3 Whitelist OV-US 0.21 0.47 0 0 0.16 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a 22 46487540 47439032 2 2 377 0 2 0 0 0 0.11 0.23 4 0 0 4 3 4 9 6 6 57.85 3.1 96.9 0 3 2 Whitelist OV-US 0.54 0.46 0 0 0.48 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::c9e28934-8379-4511-817c-d787f2c4ca3a X 32513812 154527144 1 8 377 1 1 1 0 5 0.8 0.01 7 0 0 7 3 5 8 3 5 57.85 98.38 1.39 0 1 0 Whitelist OV-US 5 0.62 0.03 0 0 0.84 0 No OV-US c9e28934-8379-4511-817c-d787f2c4ca3a OV 0.84 2.56 Ovary-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577571_T_A,CN:3 3 OV-US DO29760 TCGA-13-1487 c9e28934-8379-4511-817c-d787f2c4ca3a female deceased C56.9 74 681 NA NA Included Ovary-AdenoCA OV US 1 22.4 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 1 8405001 162932710 1 12 297 1 4 0 0 7 0.04 0.05 18 0 0 18 4 7 26 5 9 64.02 80.89 19.11 0 4 6 Whitelist OV-US 4 0.62 0.17 0 0 0.36 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 2 9305010 240217958 1 22 297 4 6 1 1 10 0.11 0.14 19 0 0 19 5 16 19 5 5 64.02 50.64 49.25 0 4 6 Whitelist OV-US 19 0.94 0.34 0 0 0.48 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 34 0.06 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 3 141567767 146231884 1 3 297 0 1 0 1 1 0.57 0.57 3 0 0 NA NA NA 11 4 5 64.02 96.32 3.64 0 6 8 Whitelist OV-US 0.87 0.79 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 4 15693856 173958458 1 12 297 1 3 1 0 7 0.28 0.64 17 0 0 17 6 9 18 6 9 64.02 41.36 58.41 0 4 2 Whitelist OV-US 16 0.83 0.85 0 0 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 5 38043082 156068614 1 5 297 1 0 0 1 3 0.57 0.01 7 0 0 7 3 5 8 3 4 64.02 53.04 44.29 0 4 6 Whitelist OV-US 0.93 0.04 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 6 73152894 161114116 1 4 297 1 1 1 1 0 1 0.9 4 0 0 4 3 4 14 5 9 64.02 87.92 11.93 0 4 2 Whitelist OV-US 1 1 0 0 1 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 7 75291113 136916027 1 4 297 1 2 0 0 1 0.3 0.07 5 0 0 5 5 5 12 7 12 64.02 99.76 0 0 4 6 Whitelist OV-US 0.54 0.21 0 0 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 8 191421 124169596 1 8 297 2 1 0 1 4 0.57 0.05 9 0 0 9 4 5 12 4 5 64.02 72.59 27.41 0 2 3 Whitelist OV-US 0.87 0.15 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 9 103658036 107933486 2 2 297 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 26 5 10 64.02 72.24 24.66 0 4 5 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 10 NA NA 0 0 297 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.13 0 NA NA 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 11 72389487 79579213 2 2 297 0 0 1 1 0 0.57 0.68 1 0 0 NA NA NA 10 5 9 64.02 99.57 0 0 3 NA Whitelist OV-US 0.68 0.88 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 12 29570515 97169429 1 4 297 0 2 0 0 2 0.11 0.01 6 0 0 6 4 4 13 5 5 64.02 28.43 67.82 8 2 4 Whitelist OV-US 0.68 0.05 0 0 0.48 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 13 NA NA 0 0 297 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.02 NA NA NA 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 14 49383787 104171963 1 4 297 2 1 0 0 1 0.3 0.32 7 0 0 7 3 5 9 3 5 64.02 60.85 38.24 0 3 2 Whitelist OV-US 0.68 0.57 0 0 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 15 49259612 49286123 1 1 297 0 1 0 0 0 0.39 0.48 2 0 NA NA NA NA 10 5 5 64.02 68.91 30.99 0 2 4 Whitelist OV-US 0.62 0.72 0 NA 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 16 1306190 73119765 1 8 297 1 1 1 0 5 0.8 0.04 11 0 0 11 6 10 12 6 6 64.02 80.81 18.9 0 4 2 Whitelist OV-US 4 0.87 0.15 0 0 0.84 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 17 40552295 76738330 1 7 297 0 2 0 0 5 0.11 0.72 5 0 0 5 3 5 5 3 3 64.02 45.71 54.28 0 6 2 Whitelist OV-US 2 0.77 0.9 0 0 0.48 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 18 22631519 22701209 1 1 297 0 1 0 0 0 0.39 0.47 1 0 0 NA NA NA 5 3 3 64.02 45.24 50.06 0 4 NA Whitelist OV-US 0.62 0.71 0 0 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 19 8994161 14739776 2 2 297 0 0 1 1 0 0.57 0 4 0 0 4 4 4 20 5 6 64.02 64.55 27.72 0 4 5 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 20 NA NA 0 0 297 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.89 0 NA NA 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 21 33201931 34000035 1 1 297 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 64.02 24.27 53.08 0 2 4 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 22 46449810 46499586 1 2 297 1 0 0 0 1 0.39 0.41 2 0 NA NA NA NA NA NA NA 64.02 9.37 90.63 0 2 4 Whitelist OV-US 0.68 0.66 0 NA 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::d3164236-c14a-4230-b527-ecd1a3992f02 X 8372363 126869448 1 7 297 2 3 0 0 2 0.14 0.11 22 0 0 22 9 9 23 9 9 64.02 99.75 0.02 0 6 2 Whitelist OV-US 0.77 0.29 0 0 0.59 0 No OV-US d3164236-c14a-4230-b527-ecd1a3992f02 OV 0.9 3.37 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578461_A_C,CN:2 2 OV-US DO28962 TCGA-24-1614 d3164236-c14a-4230-b527-ecd1a3992f02 female deceased C56.9 57 1470 NA NA Included Ovary-AdenoCA OV US 1 48.36 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 1 19972501 97026359 2 9 260 1 1 1 1 5 1 0.08 5 0 0 5 3 5 10 5 5 45.68 18.53 81.47 1 2 1 Whitelist OV-US 0.97 0.24 0 0 1 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 2 12545356 194298156 4 22 260 1 1 1 1 18 1 0 10 0 0 10 3 10 10 3 3 45.68 48.52 51.39 0 3 2 Whitelist OV-US 0.89 0.02 0 0 1 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 26 0.05 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 3 22107126 185690637 1 13 260 5 3 0 0 5 0.03 0.33 14 0 0 14 5 14 16 5 5 45.68 51.47 48.41 0 2 3 Whitelist OV-US 0.5 0.58 0 0 0.33 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 21 0.04 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 4 74130091 169824306 1 3 260 3 0 0 0 0 0.03 0.62 4 0 0 4 4 4 7 6 6 45.68 51.94 47.84 0 1 2 Whitelist OV-US 0.41 0.83 0 0 0.33 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 5 44982873 131658106 3 6 260 1 2 0 0 3 0.3 0.44 2 0 0 NA NA NA 4 3 4 45.68 75.22 21.79 0 1 3 Whitelist OV-US 0.93 0.69 0 0 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 6 75939427 121739666 5 6 260 0 3 0 2 1 0.14 0.51 5 0 0 5 3 5 9 3 4 45.68 56.19 43.67 1 3 1 Whitelist OV-US 0.54 0.76 0 0 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 7 450496 139649312 11 20 260 3 1 4 3 9 0.63 0 4 0 0 4 3 4 5 3 3 45.68 8.78 90.97 0 2 1 Whitelist OV-US 0.62 0 0 0 0.71 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 31 0.06 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 8 42383170 42461768 2 2 260 0 1 0 1 0 0.57 0.2 1 0 0 NA NA NA 8 4 4 45.68 50.19 49.8 0 2 NA Whitelist OV-US 0.68 0.42 0 0 0.64 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 9 NA NA 0 0 260 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.17 0 NA NA 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 10 64458394 106849224 1 3 260 2 1 0 0 0 0.3 0.55 3 0 0 NA NA NA 7 5 5 45.68 15.24 84.57 0 2 1 Whitelist OV-US 0.62 0.78 0 0 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 11 33185354 113881351 1 7 260 4 0 0 0 3 0.01 0.1 7 0 0 7 5 7 11 7 7 45.68 45.31 54.27 0 1 2 Whitelist OV-US 0.62 0.27 0 0 0.16 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 12 NA NA 0 0 260 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.17 0 NA NA 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 13 84059183 84073903 1 1 260 1 0 0 0 0 0.39 0.03 1 0 NA NA NA NA 5 3 4 45.68 97.57 2.43 0 3 NA Whitelist OV-US 0.62 0.1 0 NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 14 33796031 75945674 1 6 260 1 1 0 0 4 0.57 0.29 4 0 0 4 3 4 8 3 4 45.68 76 20.29 0 1 0 Whitelist OV-US 0.93 0.53 0 0 0.64 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 15 45862686 61501376 1 1 260 0 0 1 0 0 0.39 0.02 1 0 NA NA NA NA 6 4 4 45.68 54.63 45.26 0 1 NA Whitelist OV-US 0.62 0.08 0 NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 16 NA NA 0 0 260 0 0 0 0 0 NA 0.44 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.69 0 NA NA 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 17 29479359 62532307 1 7 260 2 1 0 0 4 0.3 0.08 2 0 0 NA NA NA NA NA NA 45.68 23.89 76.11 0 1 2 Whitelist OV-US 0.96 0.23 0 0 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 18 18608251 18681289 1 1 260 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 45.68 59.88 40.09 0 2 NA Whitelist OV-US 0.62 0.39 NA NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 19 10386982 47872344 1 5 260 3 0 0 0 2 0.03 0.18 3 0 0 NA NA NA 4 4 4 45.68 7.67 92.16 0 2 1 Whitelist OV-US 4 0.45 0.4 0 0 0.33 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 20 45753673 45794877 1 1 260 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 45.68 36.84 62.19 0 3 4 Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 21 44182317 44193010 1 1 260 1 0 0 0 0 0.39 0.57 2 0 NA NA NA NA 5 3 5 45.68 0.76 76.6 0 0 2 Whitelist OV-US 0.62 0.79 0 NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 22 30022506 30045737 1 1 260 0 1 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 45.68 100 0 0 1 NA Whitelist OV-US 0.62 0.33 0 NA 0.59 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e43d3769-e25f-4fb7-9080-ea26defaf094 X 13884063 116631785 2 2 260 0 0 1 1 0 0.57 0.05 5 0 0 5 3 5 6 4 4 45.68 96.36 3.41 0 1 0 Whitelist OV-US 0.68 0.15 0 0 0.64 0 No OV-US e43d3769-e25f-4fb7-9080-ea26defaf094 OV 0.85 1.82 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_C_A,CN:2 2 OV-US DO31150 TCGA-13-0906 e43d3769-e25f-4fb7-9080-ea26defaf094 female alive C56.9 50 NA 1367 NA Included Ovary-AdenoCA OV US 0 44.97 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 1 246973162 247558508 1 1 126 1 0 0 0 0 0.39 0.13 2 0 NA NA NA NA 7 3 5 60.9 96.17 0.57 0 2 3 Whitelist OV-US 0.62 0.33 0 NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 2 137973440 197498284 4 4 126 0 1 1 2 0 0.57 0.63 5 0 0 5 3 5 5 3 3 60.9 98.42 1.5 1 3 2 Whitelist OV-US 0.68 0.84 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 8 0.03 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 3 160355026 181481422 5 7 126 0 1 2 2 2 0.53 0 8 0 0 8 5 5 28 5 5 60.9 39.61 57.32 0 7 6 Whitelist OV-US 0.77 0 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 12 0.05 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 4 48409113 48550484 5 5 126 2 0 2 1 0 0.53 0.59 2 0 0 NA NA NA 8 5 5 60.9 2.8 94.83 0 1 3 Whitelist OV-US 0.68 0.81 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 10 0.04 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 5 91894051 162001770 1 4 126 3 1 0 0 0 0.11 0.36 4 0 0 4 3 4 6 4 4 60.9 99.75 0.12 0 3 2 Whitelist OV-US 0.54 0.61 0 0 0.48 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 8 0.03 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 6 69991793 73854950 2 2 126 0 1 0 1 0 0.57 0.19 4 0 0 4 4 4 12 5 5 60.9 62.7 37.16 0 3 4 Whitelist OV-US 0.68 0.41 0 0 0.64 1 Linked to high confidence OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA After polyploidization 4 0.02 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 7 148452814 148550478 1 1 126 1 0 0 0 0 0.39 0.55 1 0 NA NA NA NA 6 3 3 60.9 66.39 30.94 0 3 NA Whitelist OV-US 0.62 0.78 0 NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 8 NA NA 0 0 126 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.09 NA NA NA 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 9 81797637 81830444 1 1 126 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 8 3 4 60.9 69.73 27.16 0 1 2 Whitelist OV-US 0.62 1 0 NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 10 121832458 126786141 1 2 126 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 60.9 99.44 0.38 0 2 3 Whitelist OV-US 0.54 0.33 NA 0 0.48 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 11 78769716 119886055 6 9 126 2 1 2 1 3 0.88 0 19 0 0 19 7 8 35 8 8 60.9 50.86 48.72 0 3 2 Whitelist OV-US 6 0.97 0 0 0 0.91 1 High confidence OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA With other complex events 15 0.06 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 12 NA NA 0 0 126 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.76 NA NA NA 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 13 42016841 42567281 1 1 126 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA 4 3 4 60.9 19.07 80.93 0 2 3 Whitelist OV-US 0.62 0.58 NA NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 14 51096945 80879423 1 2 126 1 1 0 0 0 0.57 1 4 0 0 4 3 4 7 3 3 60.9 99.09 0 0 4 3 Whitelist OV-US 0.68 1 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 15 NA NA 0 0 126 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.25 0 NA NA 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 16 57229797 57270376 1 1 126 1 0 0 0 0 0.39 0.58 1 0 NA NA NA NA NA NA NA 60.9 99.77 0.13 0 3 NA Whitelist OV-US 0.62 0.81 0 NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 17 45347552 54796458 4 4 126 0 1 1 2 0 0.57 0 11 0 0 11 11 11 24 12 15 60.9 38.08 61.82 0 4 2 Whitelist OV-US 0.68 0 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 8 0.03 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 18 21245607 21351458 1 1 126 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 60.9 75.67 19.69 0 3 4 Whitelist OV-US 0.62 1 NA NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 19 37514559 40141780 1 2 126 0 1 1 0 0 0.57 0.01 3 0 0 NA NA NA 10 3 3 60.9 65.99 26.65 0 2 4 Whitelist OV-US 0.68 0.06 0 0 0.64 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 4 0.02 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 20 14249904 14563709 1 1 126 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 60.9 99.02 0 0 4 5 Whitelist OV-US 0.62 0.76 NA NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 21 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac 22 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 0 0 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::e9483296-cb91-497a-b955-39a3c3289dac X 62948560 63354551 1 1 126 1 0 0 0 0 0.39 0.22 3 0 NA NA NA NA NA NA NA 60.9 0.23 96.39 0 2 1 Whitelist OV-US 0.62 0.45 0 NA 0.59 1 No OV-US e9483296-cb91-497a-b955-39a3c3289dac OV 0.92 2.78 Ovary-AdenoCA NA 2 0.01 NA 3 OV-US DO28763 TCGA-04-1514 e9483296-cb91-497a-b955-39a3c3289dac female deceased C56.9 45 1720 NA NA Included Ovary-AdenoCA OV US 1 56.58 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 1 31222148 214987061 2 5 173 0 1 1 2 1 0.57 0.67 11 0 0 11 6 11 13 6 6 54.95 44.56 52.11 1 3 2 Whitelist OV-US 0.93 0.87 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 9 0.03 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 2 5253705 214049183 1 10 173 5 1 0 0 4 0.01 0.68 16 0 0 16 6 16 19 7 7 54.95 63.74 33.58 0 1 2 Whitelist OV-US 3 0.47 0.88 0 0 0.19 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 16 0.05 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 3 9685434 195435611 1 14 173 4 2 1 0 7 0.17 0.1 17 0 0 17 8 13 18 8 11 54.95 67.51 29.24 0 1 2 Whitelist OV-US 2 0.62 0.26 0 0 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 21 0.06 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 4 84063109 84075995 1 1 173 1 0 0 0 0 0.39 0.09 2 0 NA NA NA NA NA NA NA 54.95 99.74 0 0 0 1 Whitelist OV-US 0.62 0.26 0 NA 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 5 7275480 45450233 2 2 173 1 1 0 0 0 0.57 1 1 0 0 NA NA NA 10 6 6 54.95 63.74 36.13 0 2 NA Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 6 12083256 126852111 1 4 173 1 2 0 0 1 0.3 0.52 6 0 0 6 6 6 6 6 6 54.95 75.19 24.64 0 1 2 Whitelist OV-US 0.54 0.76 0 0 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 7 0.02 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 7 39425327 40000728 1 1 173 0 1 0 0 0 0.39 0.18 2 0 NA NA NA NA 7 3 5 54.95 35.53 61.92 0 1 2 Whitelist OV-US 0.62 0.39 0 NA 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 8 54915288 118024939 2 6 173 0 1 2 1 2 0.57 0.29 7 0 0 7 7 7 9 7 7 54.95 91.95 4.19 0 3 4 Whitelist OV-US 11 0.68 0.54 0 0 0.64 0 Linked to low confidence OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA After polyploidization 10 0.03 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 9 16068594 139755564 1 7 173 1 3 0 0 3 0.11 0.33 13 0 0 13 3 9 15 4 4 54.95 52.29 47.01 0 2 1 Whitelist OV-US 0.54 0.58 0 0 0.48 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 11 0.03 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 10 8704189 115997918 1 5 173 0 2 1 1 1 0.57 0.07 19 0 0 19 4 7 22 5 7 54.95 33.84 62.81 0 2 3 Whitelist OV-US 0.62 0.21 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 9 0.03 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 11 70316616 123074109 8 12 173 3 3 1 1 4 0.57 0 15 0 0 15 6 15 24 9 9 54.95 20.6 78.98 1 2 3 Whitelist OV-US 0.68 0 0 0 0.64 0 Low confidence OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA With other complex events 20 0.06 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 12 46494006 128575696 1 7 173 1 2 2 2 0 0.93 0.03 13 0 0 13 5 11 17 5 5 54.95 14.1 85.82 0 2 3 Whitelist OV-US 0.96 0.1 0 0 0.95 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 14 0.04 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 13 NA NA 0 0 173 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.12 NA NA NA 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 14 52919254 76903889 1 1 173 0 0 0 1 0 0.39 1 6 0 0 6 3 5 10 4 7 54.95 66.01 33.54 0 2 0 Whitelist OV-US 0.62 1 0 0 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 15 78757027 89764439 1 2 173 1 1 0 0 0 0.57 0.82 2 0 0 NA NA NA 6 4 4 54.95 61.33 33.75 0 2 3 Whitelist OV-US 0.68 0.96 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 16 67152683 67786395 1 1 173 0 1 0 0 0 0.39 0.81 1 0 NA NA NA NA 4 3 3 54.95 48.22 46.37 0 1 NA Whitelist OV-US 0.62 0.96 0 NA 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 17 34970523 38710034 1 2 173 0 1 0 1 0 0.57 0.81 3 0 0 NA NA NA 5 5 5 54.95 32.44 66.47 0 2 1 Whitelist OV-US 0.68 0.96 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 18 8241256 9890015 1 1 173 0 1 0 0 0 0.39 0.81 2 0 NA NA NA NA 8 5 5 54.95 71.13 28.83 0 2 3 Whitelist OV-US 0.62 0.96 0 NA 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 2 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 19 35972583 58857309 1 3 173 0 1 1 0 1 0.57 0.59 5 0 0 5 4 5 8 4 4 54.95 30.82 68.55 0 2 3 Whitelist OV-US 0.87 0.81 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 5 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 20 32311765 61155331 1 4 173 2 2 0 0 0 0.26 0.1 5 0 0 5 3 5 5 3 3 54.95 0.76 98.23 0 2 1 Whitelist OV-US 0.62 0.27 0 0 0.59 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 8 0.02 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 21 36227617 44572747 2 2 173 1 1 0 0 0 0.57 0.47 4 0 0 4 3 4 8 4 4 54.95 12.14 65.21 0 3 2 Whitelist OV-US 0.68 0.72 0 0 0.64 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d 22 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::ee0a4a13-613e-4c5d-96c3-8083a013702d X NA NA 0 0 173 0 0 0 0 0 NA 0.73 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.9 0 NA NA 0 No OV-US ee0a4a13-613e-4c5d-96c3-8083a013702d OV 0.55 1.67 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28273 TCGA-13-0890 ee0a4a13-613e-4c5d-96c3-8083a013702d female alive C56.9 56 NA 2068 NA Included Ovary-AdenoCA OV US 0 68.03 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 1 155901885 202150456 5 5 239 0 2 1 2 0 0.53 0.23 7 0 0 7 4 7 15 5 7 36.35 18.87 78.15 0 2 3 Whitelist OV-US 0.68 0.46 0 0 0.64 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 2 28986695 219321806 1 13 239 0 10 1 0 2 0 0.48 15 0 0 15 7 15 17 7 7 36.35 26.11 71.2 0 2 3 Whitelist OV-US 0.03 0.73 0 0 0 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 24 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 3 23851395 186124247 1 15 239 3 8 0 0 4 0 0.9 13 0 0 13 3 9 14 3 5 36.35 43.87 55.99 0 3 2 Whitelist OV-US 0.04 1 0 0 0.07 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 26 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 4 76999226 182628561 1 6 239 2 1 0 0 3 0.3 0.7 5 0 0 5 4 5 6 5 5 36.35 29.63 70.35 0 1 2 Whitelist OV-US 0.62 0.89 0 0 0.59 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 5 28773090 125693661 1 9 239 2 3 1 1 2 0.67 0.59 9 0 0 9 7 9 12 7 7 36.35 30.65 69.22 0 2 1 Whitelist OV-US 0.68 0.81 0 0 0.74 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 6 22598746 51760969 1 6 239 0 3 1 0 2 0.11 0.68 3 0 0 NA NA NA 4 4 4 36.35 50.26 49.5 0 2 1 Whitelist OV-US 0.68 0.88 0 0 0.48 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 7 2275256 125980766 1 6 239 1 2 0 0 3 0.3 0.32 5 0 0 5 3 5 6 4 4 36.35 55.25 44.53 0 2 1 Whitelist OV-US 0.62 0.57 0 0 0.59 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 8 9337158 142535665 1 11 239 0 4 0 1 6 0.04 0.02 18 0 0 18 4 10 19 4 5 36.35 90.38 6.1 0 5 4 Whitelist OV-US 0.62 0.07 0 0 0.36 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 9 12599717 132422558 1 5 239 0 3 0 0 2 0.03 0.51 6 0 0 6 3 6 6 3 3 36.35 57.01 40.37 0 2 3 Whitelist OV-US 0.62 0.75 0 0 0.33 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 10 82688027 82839128 2 2 239 0 1 1 0 0 0.57 0.64 2 0 0 NA NA NA 4 4 4 36.35 38.76 61.06 0 1 2 Whitelist OV-US 0.68 0.85 0 0 0.64 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 11 28168070 90773179 1 14 239 1 9 0 0 4 0 0.01 10 0 0 10 9 10 11 9 9 36.35 61.48 38.1 0 3 4 Whitelist OV-US 0.08 0.06 0 0 0.01 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 24 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 12 12657776 54468173 1 5 239 0 5 0 0 0 0 1 6 0 0 6 6 6 9 8 9 36.35 10.97 88.94 0 2 3 Whitelist OV-US 0.1 1 0 0 0.07 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 13 24751326 24764285 1 1 239 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 36.35 85.85 0 0 1 NA Whitelist OV-US 0.62 0.02 NA NA 0.59 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 14 31665846 50465265 1 2 239 0 2 0 0 0 0.11 0.13 3 0 0 NA NA NA 4 3 3 36.35 48.75 35.34 0 2 3 Whitelist OV-US 0.54 0.32 0 0 0.48 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 15 41449545 92602643 1 4 239 0 4 0 0 0 0.01 1 6 0 0 6 6 6 7 7 7 36.35 0.06 84.44 0 2 3 Whitelist OV-US 0.21 1 0 0 0.16 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 16 8576585 89719019 1 7 239 1 5 0 0 1 0.01 0.01 5 0 0 5 3 5 6 4 4 36.35 17.37 81.76 0 2 1 Whitelist OV-US 0.13 0.06 0 0 0.19 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 17 3884991 77809680 1 11 239 1 7 0 0 3 0 0.02 2 0 0 NA NA NA NA NA NA 36.35 99.95 0 0 1 3 Whitelist OV-US 0.17 0.07 0 0 0.04 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 18 11518906 63428598 1 5 239 1 4 0 0 0 0.04 0.69 5 0 0 5 5 5 6 5 5 36.35 9.16 90.8 0 2 3 Whitelist OV-US 0.45 0.89 0 0 0.36 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 19 8018821 47262611 1 6 239 0 4 0 0 2 0.01 0 6 0 0 6 4 6 9 6 6 36.35 35.67 64.16 0 2 1 Whitelist OV-US 0.54 0.01 0 0 0.16 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 20 45561398 45575257 1 1 239 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 36.35 0.02 98.96 0 1 2 Whitelist OV-US 0.62 1 0 NA 0.59 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 21 NA NA 0 0 239 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.93 NA NA NA 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff 22 38758087 41412406 1 7 239 0 2 0 2 3 0.26 0 3 0 0 NA NA NA 6 5 6 36.35 21.55 54.67 0 2 3 Whitelist OV-US 5 0.96 0 0 0 0.59 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::eeb9d147-608d-4692-8adf-2f601d23a8ff X 44167644 102121824 1 2 239 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 36.35 0.01 99.76 0 2 NA Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US eeb9d147-608d-4692-8adf-2f601d23a8ff OV 0.85 1.93 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 OV-US DO30340 TCGA-36-1574 eeb9d147-608d-4692-8adf-2f601d23a8ff female alive C56.9 48 NA 686 NA Included Ovary-AdenoCA OV US 0 22.57 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 1 94459883 162697599 4 5 288 3 1 0 0 1 0.11 0.12 15 0 0 15 5 8 35 10 10 79.21 97.02 0 0 7 6 Whitelist OV-US 0.62 0.31 0 0 0.48 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 2 27633198 216960765 1 15 288 8 1 0 0 6 0 0.67 25 0 0 25 7 16 28 7 7 79.21 99.9 0 0 4 5 Whitelist OV-US 0.13 0.87 0 0 0.02 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 3 83782484 189981100 2 14 288 3 1 1 1 8 0.57 0.08 21 0 0 21 7 12 33 8 13 79.21 75.98 20.87 0 6 5 Whitelist OV-US 2 0.49 0.23 0 0 0.64 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 4 68044018 163628576 1 4 288 3 1 0 0 0 0.11 0.91 12 0 0 12 7 7 16 7 7 79.21 50.52 46.93 0 2 1 Whitelist OV-US 0.54 1 0 0 0.48 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 5 19213254 153905112 1 11 288 8 0 0 0 3 0 0.72 12 0 0 12 6 10 13 6 10 79.21 97.1 0.24 0 3 5 Whitelist OV-US 1 0.03 0.9 0 0 0 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 6 62332260 114274242 4 6 288 1 2 1 0 2 0.57 0 27 0 0 27 7 7 60 7 7 79.21 93.22 3.72 5 6 8 Whitelist OV-US 0.62 0 0 0 0.64 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 7 64898151 152863434 1 15 288 6 1 0 0 8 0 0.04 17 0 0 17 4 7 24 6 7 79.21 97.28 0 0 6 5 Whitelist OV-US 12 0.54 0.13 0 0 0.09 1 Linked to high confidence OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA With other complex events 22 0.04 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 8 53844011 60419750 3 5 288 0 3 0 0 2 0.03 0 10 0 0 10 4 7 31 5 5 79.21 58.32 38.26 0 4 5 Whitelist OV-US 0.62 0.02 0 0 0.33 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 9 35632240 97828351 1 3 288 3 0 0 0 0 0.03 0.13 5 0 0 5 3 5 7 3 7 79.21 99.45 0.38 0 3 1 Whitelist OV-US 0.41 0.32 0 0 0.33 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 10 38043794 123678267 4 7 288 1 1 1 1 3 1 0.26 8 0 0 8 7 8 15 7 7 79.21 96.25 0 0 4 3 Whitelist OV-US 7 0.77 0.5 0 0 1 1 High confidence OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA After polyploidization 11 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 11 48431687 118904150 1 8 288 4 0 0 0 4 0.01 0.4 8 0 0 8 8 8 9 8 8 79.21 81.59 17.86 0 3 4 Whitelist OV-US 0.54 0.65 0 0 0.16 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 12 12348208 125094953 1 15 288 4 0 0 1 10 0.04 0.09 19 0 0 19 6 11 20 6 10 79.21 99.92 0 0 5 6 Whitelist OV-US 19_7 0.68 0.25 0 0 0.36 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 13 20310605 20327386 1 1 288 1 0 0 0 0 0.39 0.05 1 0 NA NA NA NA 4 4 4 79.21 27.2 72.8 0 2 NA Whitelist OV-US 0.62 0.17 0 NA 0.59 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 14 21035313 81779283 1 9 288 3 1 0 1 4 0.28 0.03 17 0 0 17 5 6 18 6 6 79.21 99.08 0.01 0 3 4 Whitelist OV-US 19 0.62 0.1 0 0 0.59 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 15 34043793 77867971 1 4 288 2 1 0 0 1 0.3 0.21 8 0 0 8 6 8 14 6 6 79.21 70.27 24.95 0 3 4 Whitelist OV-US 0.68 0.43 0 0 0.59 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 16 2640897 89678222 1 5 288 3 0 0 0 2 0.03 1 8 0 0 8 3 6 9 4 6 79.21 62.84 36.32 0 4 2 Whitelist OV-US 0.45 1 0 0 0.33 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 17 1444109 64177126 1 5 288 3 0 0 0 2 0.03 0.36 11 0 0 11 4 5 14 4 6 79.21 93.62 0 0 5 3 Whitelist OV-US 0.62 0.62 0 0 0.33 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 18 504025 24235691 1 2 288 2 0 0 0 0 0.11 0.36 5 0 0 5 3 3 14 9 10 79.21 36.15 63.82 0 5 3 Whitelist OV-US 0.54 0.61 0 0 0.48 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 19 28158540 34749677 2 3 288 1 0 0 1 1 0.57 0 8 0 0 8 8 8 20 10 12 79.21 92.4 0.24 0 4 5 Whitelist OV-US 0.87 0 0 0 0.64 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 20 41843684 42205554 2 2 288 0 0 1 1 0 0.57 0.22 4 0 0 4 3 4 11 3 4 79.21 92.9 0 0 6 5 Whitelist OV-US 0.68 0.46 0 0 0.64 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 21 NA NA 0 0 288 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.52 NA NA NA 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c 22 24073456 42443260 1 3 288 0 1 1 0 1 0.57 1 5 NA 0 5 0 5 8 3 3 79.21 98.32 1.68 0 1 2 Whitelist OV-US 0.87 1 NA 0 0.64 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f0c353fd-947c-41e2-b643-3ecc0d69796c X 49631421 123129462 1 7 288 2 0 0 0 5 0.11 0.59 5 0 0 5 4 5 6 4 4 79.21 61.29 38.48 0 1 2 Whitelist OV-US 12 0.96 0.81 0 0 0.48 1 No OV-US f0c353fd-947c-41e2-b643-3ecc0d69796c OV 0.91 4.11 Ovary-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578204_T_A,CN:4 5 OV-US DO28093 TCGA-04-1347 f0c353fd-947c-41e2-b643-3ecc0d69796c female alive C56.9 81 NA 1919 NA Included Ovary-AdenoCA OV US 0 63.12 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 1 16014279 230004409 1 7 235 2 1 0 0 4 0.3 0.07 4 0 0 4 4 4 4 4 4 42.19 44.15 55.85 0 1 2 Whitelist OV-US 8 0.77 0.21 0 0 0.59 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 10 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 2 42916600 62316818 2 2 235 0 2 0 0 0 0.11 0 5 0 0 5 3 5 29 8 8 42.19 28.72 71.19 0 3 1 Whitelist OV-US 0.54 0.01 0 0 0.48 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 3 10923132 156074711 1 5 235 0 4 0 0 1 0.01 0.8 11 0 0 11 9 11 13 10 10 42.19 25.13 74.75 0 2 3 Whitelist OV-US 0.45 0.95 0 0 0.16 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 9 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 4 30752695 148972522 1 10 235 0 2 1 0 7 0.3 0.36 10 0 0 10 5 10 12 6 6 42.19 68.56 31.42 0 2 1 Whitelist OV-US 8 0.62 0.62 0 0 0.59 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 13 0.03 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 5 7762710 165714746 1 12 235 1 5 1 0 5 0.04 0.89 14 0 0 14 6 14 15 6 6 42.19 50.72 49.16 0 2 3 Whitelist OV-US 12 0.54 1 0 0 0.38 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 19 0.04 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 6 3312885 77705133 4 12 235 2 0 1 1 8 0.57 0.01 8 0 0 8 3 6 10 3 3 42.19 53.28 46.57 0 2 1 Whitelist OV-US 0.83 0.05 0 0 0.64 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 16 0.03 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 7 82172329 83718348 2 2 235 0 2 0 0 0 0.11 0.02 4 0 0 4 3 4 21 7 7 42.19 79.12 18.48 0 4 3 Whitelist OV-US 0.54 0.08 0 0 0.48 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 8 23038721 142905466 5 10 235 1 1 1 2 5 0.9 0.14 19 0 0 19 8 9 19 8 9 42.19 57.79 42.09 0 4 3 Whitelist OV-US 4 0.86 0.33 0 0 0.92 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 15 0.03 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 False positive; manually removed OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 9 NA NA 0 0 235 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-US NA 0.14 NA NA NA 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 10 15218814 129918537 1 10 235 0 4 0 0 6 0.01 0.21 9 0 0 9 5 9 11 5 5 42.19 24.23 75.61 0 2 3 Whitelist OV-US 0.07 0.44 0 0 0.16 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 14 0.03 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 11 13176310 121965826 1 5 235 0 4 0 1 0 0.04 0.12 8 0 0 8 4 8 10 4 4 42.19 66.24 33.33 0 3 2 Whitelist OV-US 0.45 0.3 0 0 0.36 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 10 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 12 6065480 114113091 1 6 235 0 4 0 0 2 0.01 0.76 4 0 0 4 4 4 6 6 6 42.19 7.7 92.28 0 2 3 Whitelist OV-US 5 0.25 0.92 0 0 0.16 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 10 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 13 71986035 71997595 1 1 235 0 1 0 0 0 0.39 0.21 1 0 NA NA NA NA NA NA NA 42.19 78.65 21.35 0 1 NA Whitelist OV-US 0.62 0.43 0 NA 0.59 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 2 0 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 14 76202582 105154674 1 3 235 0 3 0 0 0 0.03 0.71 5 0 0 5 5 5 9 7 7 42.19 64.7 34.39 0 3 4 Whitelist OV-US 0.41 0.9 0 0 0.33 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 6 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 15 48845748 101848208 1 6 235 0 4 0 0 2 0.01 0.84 7 0 0 7 3 6 7 3 3 42.19 85.17 14.7 0 3 2 Whitelist OV-US 3 0.54 0.98 0 0 0.16 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 10 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 16 28496652 28520794 1 1 235 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA 7 3 3 42.19 35.32 64.58 0 2 NA Whitelist OV-US 0.62 0.2 0 NA 0.59 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 2 0 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 17 25673648 77795860 1 11 235 0 3 0 0 8 0.03 0.01 6 0 0 6 3 6 6 3 3 42.19 53.94 46.06 0 2 3 Whitelist OV-US 12 0.34 0.03 0 0 0.33 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 14 0.03 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 18 66796736 66815654 1 1 235 0 1 0 0 0 0.39 0.42 2 0 NA NA NA NA 5 3 3 42.19 32.41 67.56 0 2 3 Whitelist OV-US 0.62 0.67 0 NA 0.59 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 2 0 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 19 18902695 53477191 1 5 235 0 3 0 0 2 0.03 0 3 0 0 NA NA NA 4 3 3 42.19 9.88 89.95 0 2 3 Whitelist OV-US 0.62 0 0 0 0.33 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 8 0.02 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 20 7972869 51584914 1 5 235 0 2 0 0 3 0.11 0.11 3 0 0 NA NA NA 5 5 5 42.19 46.02 53.06 0 3 2 Whitelist OV-US 0.62 0.28 0 0 0.48 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 7 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 21 NA NA 0 0 235 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.63 NA NA NA 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 0 0 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 22 19801095 28429755 1 2 235 0 2 0 0 0 0.11 0.76 2 NA 0 NA NA NA 4 3 3 42.19 28.91 71.09 0 2 3 Whitelist OV-US 0.54 0.93 NA 0 0.48 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f34aa3b6-e966-49c6-bc55-130545772c53 X 84271793 87543855 1 2 235 0 2 0 0 0 0.11 0.55 1 0 0 NA NA NA NA NA NA 42.19 0 99.73 0 2 NA Whitelist OV-US 0.54 0.78 0 0 0.48 0 No OV-US f34aa3b6-e966-49c6-bc55-130545772c53 OV 0.94 1.88 Ovary-AdenoCA NA 4 0.01 NA 2 OV-US DO28089 TCGA-24-1103 f34aa3b6-e966-49c6-bc55-130545772c53 female deceased C56.9 50 1646 NA NA Included Ovary-AdenoCA OV US 1 54.14 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 1 62322951 207387042 1 8 243 4 0 1 0 3 0.04 0.55 8 0 0 8 6 8 13 6 8 35.99 37.76 62.24 0 2 1 Whitelist OV-US 0.54 0.78 0 0 0.36 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 13 0.03 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 2 23014948 233437308 1 12 243 7 0 2 2 1 0.02 0.73 8 0 0 8 7 8 9 7 7 35.99 30.41 69.48 0 2 1 Whitelist OV-US 0.54 0.9 0 0 0.33 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 23 0.05 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 3 6834554 127395268 2 6 243 0 1 1 0 4 0.57 0.45 12 0 0 12 9 9 20 9 9 35.99 69.35 27.61 0 2 1 Whitelist OV-US 0.93 0.69 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 8 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 4 1227023 45810084 1 6 243 4 0 0 0 2 0.01 0.03 8 0 0 8 5 8 12 6 6 35.99 56.35 43.64 0 2 1 Whitelist OV-US 0.54 0.11 0 0 0.16 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 5 91230173 97039609 2 6 243 0 0 1 1 4 0.57 0.14 1 0 0 NA NA NA 11 11 11 35.99 18.32 81.54 0 2 NA Whitelist OV-US 8 0.62 0.34 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 8 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 6 29298343 105707387 1 4 243 3 0 0 0 1 0.03 0.5 5 0 0 5 5 5 8 8 8 35.99 41.98 57.86 1 1 2 Whitelist OV-US 0.54 0.74 0 0 0.33 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 7 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 7 11187007 34311150 1 2 243 2 0 0 0 0 0.11 0.78 2 0 0 NA NA NA 5 3 3 35.99 28.22 71.56 0 0 1 Whitelist OV-US 0.54 0.93 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 8 11451346 145261665 1 7 243 3 0 1 3 0 0.28 0.02 9 0 0 9 9 9 9 9 9 35.99 0.03 99.96 0 2 1 Whitelist OV-US 0.62 0.08 0 0 0.59 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 14 0.03 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 9 36172640 36198219 1 1 243 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 4 4 4 35.99 15.92 83.38 0 1 2 Whitelist OV-US 0.62 0.57 0 NA 0.59 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 10 9785874 10021737 4 6 243 2 1 1 0 2 0.57 0 3 0 0 NA NA NA 15 8 8 35.99 16.67 83.16 0 2 1 Whitelist OV-US 0.93 0 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 11 42462540 102091681 1 2 243 2 0 0 0 0 0.11 0.65 2 0 0 NA NA NA NA NA NA 35.99 0.01 99.56 0 1 2 Whitelist OV-US 0.54 0.86 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 12 4016723 4133793 2 2 243 1 0 0 1 0 0.57 0.09 2 0 0 NA NA NA 12 12 12 35.99 26.42 73.5 0 1 2 Whitelist OV-US 0.68 0.26 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 13 23877505 49137971 1 2 243 2 0 0 0 0 0.11 0.02 4 NA 0 4 4 4 5 5 5 35.99 100 0 0 0 1 Whitelist OV-US 0.54 0.08 NA 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 14 45690653 101279155 1 11 243 4 2 0 0 5 0.06 0.01 8 0 0 8 7 8 9 7 7 35.99 5.97 93.12 0 2 1 Whitelist OV-US 6 0.49 0.06 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 17 0.03 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 15 23833813 65458096 1 2 243 1 0 1 0 0 0.57 0.01 2 0 0 NA NA NA 4 3 3 35.99 4.27 95.63 0 1 2 Whitelist OV-US 0.68 0.04 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 16 NA NA 0 0 243 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.46 NA NA NA 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 17 17524670 49858508 1 6 243 5 0 0 1 0 0.01 0.55 5 0 0 5 5 5 6 5 5 35.99 67.26 32.71 0 1 0 Whitelist OV-US 0.25 0.78 0 0 0.19 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 12 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 18 1631653 36347531 1 2 243 2 0 0 0 0 0.11 1 3 0 0 NA NA NA NA NA NA 35.99 0.01 99.96 0 2 1 Whitelist OV-US 0.54 1 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 19 17849671 17864237 2 2 243 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 4 4 4 35.99 32.92 66.91 0 2 NA Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 4 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 20 671302 47657333 1 8 243 2 0 0 0 6 0.11 0.02 2 0 0 NA NA NA 5 5 5 35.99 0.14 98.89 0 1 2 Whitelist OV-US 1_3 0.62 0.09 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 10 0.02 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 21 21008880 21028349 1 1 243 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 35.99 0.04 77.31 0 1 2 Whitelist OV-US 0.62 1 NA NA 0.59 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 2 0 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f 22 NA NA 0 0 243 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA 0.21 0 NA NA 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 0 0 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::f5033d52-ec36-4e67-88d8-b6d898b81b2f X 63495236 117595802 1 4 243 2 0 0 0 2 0.11 0.14 3 0 0 NA NA NA NA NA NA 35.99 99.77 0 0 1 0 Whitelist OV-US 0.68 0.34 0 0 0.48 0 No OV-US f5033d52-ec36-4e67-88d8-b6d898b81b2f OV 0.87 1.81 Ovary-AdenoCA NA 6 0.01 frameshift_insertion,17_7579535_C_-,CN:1 2 OV-US DO31769 TCGA-25-2391 f5033d52-ec36-4e67-88d8-b6d898b81b2f female deceased C56.9 57 1492 NA NA Included Ovary-AdenoCA OV US 1 49.08 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 1 28680016 28760485 2 2 170 1 1 0 0 0 0.57 0.03 3 0 0 NA NA NA 9 5 7 64.47 99.97 0.03 0 4 2 Whitelist OV-US 0.68 0.12 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 2 28663244 42704169 1 2 170 0 2 0 0 0 0.11 0 4 0 0 4 3 4 8 3 5 64.47 69.98 26.95 0 3 4 Whitelist OV-US 0.54 0.01 0 0 0.48 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 3 96961383 117251520 10 14 170 4 3 2 1 4 0.57 0 23 0 0 23 4 6 34 4 6 64.47 99.6 0.28 2 8 10 Whitelist OV-US 4 0.68 0.01 0 0 0.64 0 Low confidence OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA With other complex events 24 0.07 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 4 20228916 83508025 1 3 170 1 2 0 0 0 0.3 0.05 6 0 0 6 5 6 7 5 5 64.47 99.77 0.22 0 3 4 Whitelist OV-US 0.62 0.15 0 0 0.59 0 Linked to low confidence OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA After polyploidization 6 0.02 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 5 116832283 174668257 5 5 170 2 1 1 1 0 0.9 0.63 8 0 0 8 8 8 12 10 10 64.47 39.98 57.34 0 2 3 Whitelist OV-US 0.93 0.85 0 0 0.92 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 6 26015446 158682711 1 3 170 0 1 1 0 1 0.57 0.11 6 0 0 6 4 6 6 4 4 64.47 99.86 0 0 4 3 Whitelist OV-US 0.87 0.27 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 5 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 7 34396316 95299708 1 8 170 3 3 1 0 1 0.28 0.49 21 0 0 21 6 9 24 6 6 64.47 97.07 0.36 0 3 4 Whitelist OV-US 0.62 0.74 0 0 0.59 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 15 0.04 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 8 41830249 134064686 15 17 170 6 5 1 3 2 0.27 0 36 0 0 36 6 6 43 6 6 64.47 58.83 37.64 4 3 4 Whitelist OV-US 0.62 0 0 0 0.59 0 Low confidence OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA With other complex events 32 0.09 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 9 80850858 140453024 1 5 170 1 4 0 0 0 0.04 0.69 4 0 0 4 3 4 5 3 3 64.47 99.43 0 0 4 3 Whitelist OV-US 0.45 0.89 0 0 0.36 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 10 0.03 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 10 73433726 93706857 1 2 170 0 2 0 0 0 0.11 0.1 4 0 0 4 4 4 9 6 6 64.47 28.09 68.39 0 2 3 Whitelist OV-US 0.54 0.26 0 0 0.48 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 11 74242827 101923876 2 7 170 0 0 3 1 3 0.11 0 14 0 0 14 4 4 20 4 4 64.47 40.25 59.33 0 1 2 Whitelist OV-US 0.62 0.01 0 0 0.48 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 11 0.03 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 12 46520542 47919886 2 2 170 0 1 1 0 0 0.57 1 3 0 0 NA NA NA 15 9 9 64.47 96.26 0 0 3 4 Whitelist OV-US 0.68 1 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 13 NA NA 0 0 170 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist OV-US NA NA NA NA NA 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 14 77499354 100573860 1 3 170 0 2 0 0 1 0.11 0.66 6 0 0 6 3 4 9 3 3 64.47 5.78 78.75 0 2 3 Whitelist OV-US 0.62 0.87 0 0 0.48 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 5 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 15 NA NA 0 0 170 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist OV-US NA 0.26 NA NA NA 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 16 9731060 25777320 3 5 170 0 2 0 1 2 0.3 0.05 9 0 0 9 4 9 22 5 5 64.47 55.08 39.96 2 2 3 Whitelist OV-US 0.62 0.16 0 0 0.59 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 8 0.02 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 17 19726792 19838970 1 1 170 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 64.47 0 100 0 2 NA Whitelist OV-US 0.62 0.26 NA NA 0.59 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 2 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 18 285958 698765 2 2 170 0 0 1 1 0 0.57 0.14 3 0 0 NA NA NA 12 3 5 64.47 79.06 16.28 0 2 49 Whitelist OV-US 0.68 0.34 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 4 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 19 29047445 34926013 4 5 170 2 1 0 1 1 0.57 0 10 0 0 10 0 3 36 7 7 64.47 33.35 59.26 2 4 8 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 9 0.03 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 20 56240364 60460103 1 3 170 1 0 0 1 1 0.57 0.42 4 0 0 4 3 4 10 4 8 64.47 92.96 0 0 5 4 Whitelist OV-US 0.62 0.67 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 5 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 21 NA NA 0 0 170 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist OV-US NA 0.03 0 NA NA 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 0 0 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c 22 44504016 46163669 4 4 170 2 1 1 0 0 0.57 0 5 0 0 5 5 5 13 5 6 64.47 14 86 0 3 5 Whitelist OV-US 0.68 0 0 0 0.64 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 8 0.02 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 OV-US::ff530f28-0ec0-4494-bb54-44bb055bae1c X 32362256 122969890 1 3 170 2 0 0 0 1 0.11 0.29 5 0 0 5 3 5 9 4 4 64.47 26.22 73.52 0 2 0 Whitelist OV-US 0.41 0.53 0 0 0.48 0 No OV-US ff530f28-0ec0-4494-bb54-44bb055bae1c OV 0.7 3.15 Ovary-AdenoCA NA 5 0.01 frameshift_deletion,17_7578470_-_CGGGCGGGGGTGT,CN:2 3 OV-US DO29980 TCGA-13-0723 ff530f28-0ec0-4494-bb54-44bb055bae1c female deceased C56.9 63 1204 NA NA Included Ovary-AdenoCA OV US 1 39.61 PACA-AU::ICGC_0006 1 78666684 185373808 2 5 258 0 0 1 1 3 0.57 0.64 9 0 0 9 5 5 26 9 10 73.13 82.19 14.79 0 4 2 Whitelist PACA-AU 0.68 0.85 0 0 0.64 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 7 0.01 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 2 7594273 219080788 1 14 258 3 1 1 0 9 0.28 0.65 21 0 0 21 7 10 22 7 11 73.13 93.48 3.2 0 4 3 Whitelist PACA-AU 6 0.62 0.86 0 0 0.59 0 Linked to low confidence PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA With other complex events 19 0.04 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 3 13757650 13772448 2 2 258 0 0 1 1 0 0.57 0.39 1 0 0 NA NA NA 8 3 3 73.13 99.97 0 0 3 NA Whitelist PACA-AU 0.68 0.64 0 0 0.64 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 4 119147689 190577193 8 10 258 2 1 3 2 2 0.8 0.9 14 0 0 14 6 8 18 6 10 73.13 89.22 10.46 11 1 2 Whitelist PACA-AU 2 0.96 1 0 0 0.84 0 Low confidence PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA With other complex events 18 0.03 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 5 53592967 178711201 1 5 258 3 1 0 0 1 0.11 0.04 5 0 0 5 3 5 7 3 7 73.13 65.26 34.62 4 4 1 Whitelist PACA-AU 0.62 0.13 0 0 0.48 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 9 0.02 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 6 5830962 162833858 1 12 258 3 2 0 0 7 0.14 0.69 17 0 0 17 6 10 18 6 10 73.13 76.8 23.08 13 2 4 Whitelist PACA-AU 15_2 0.93 0.89 0 0 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 17 0.03 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 7 77738139 127548603 1 4 258 1 2 0 1 0 0.57 0.21 8 0 0 8 3 5 15 6 6 73.13 97.14 2.64 0 3 1 Whitelist PACA-AU 0.68 0.44 0 0 0.64 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 8 226839 1624209 4 5 258 1 0 1 2 1 0.57 0.39 7 0 0 7 5 7 16 5 5 73.13 79.53 20.42 0 2 3 Whitelist PACA-AU 0.93 0.64 0 0 0.64 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 9 0.02 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 9 4169992 104272090 1 7 258 3 2 1 0 1 0.34 1 12 0 0 12 7 12 12 7 7 73.13 80.08 19.21 3 2 0 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 13 0.03 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 10 84103631 84171525 1 1 258 1 0 0 0 0 0.39 0.18 2 0 NA NA NA NA 8 3 5 73.13 97.65 2.16 0 1 3 Whitelist PACA-AU 0.62 0.4 0 NA 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 11 3857736 45323041 46 47 258 10 17 9 10 1 0.31 0 49 0 0 49 4 5 54 4 5 73.13 99.57 0 0 5 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA With other complex events 93 0.18 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 12 206890 62821755 1 9 258 3 3 1 1 1 0.57 0.37 10 0 0 10 4 4 15 4 5 73.13 55.76 44.16 2 3 2 Whitelist PACA-AU 0.85 0.63 0 0 0.64 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 17 0.03 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 13 73409463 74398039 1 1 258 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 73.13 0.86 99.14 0 2 4 Whitelist PACA-AU 0.62 0.02 NA NA 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 14 NA NA 0 0 258 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.08 NA NA NA 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 15 44849611 101448276 1 5 258 2 0 0 0 3 0.11 0.7 7 0 0 7 6 7 7 6 6 73.13 38.16 61.84 1 3 4 Whitelist PACA-AU 6 0.68 0.9 0 0 0.48 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 7 0.01 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 16 24283783 24341395 1 1 258 1 0 0 0 0 0.39 0.34 2 0.04 NA NA NA NA 9 3 4 73.13 69.55 25.93 0 2 4 Whitelist PACA-AU 0.62 0.59 0.04 NA 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 17 38660733 38676608 1 1 258 0 1 0 0 0 0.39 0.03 2 0 NA NA NA NA 10 3 4 73.13 47.9 47.65 0 4 6 Whitelist PACA-AU 0.62 0.12 0 NA 0.59 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 18 18737344 50863391 1 4 258 1 1 1 0 1 0.8 0.7 8 0 0 8 3 4 9 4 4 73.13 90.74 4.61 0 3 1 Whitelist PACA-AU 0.68 0.89 0 0 0.84 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 7 0.01 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 19 29654030 50499583 1 6 258 1 1 2 1 1 0.9 0 23 0 0 23 3 4 29 3 5 73.13 83.31 9.41 0 8 2 Whitelist PACA-AU 0.93 0 0 0 0.92 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 11 0.02 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 20 4948573 40213554 1 7 258 4 1 0 0 2 0.04 0.13 11 0 0 11 3 5 12 3 6 73.13 98.82 0.21 3 4 2 Whitelist PACA-AU 1 0.62 0.32 0 0 0.36 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 12 0.02 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 21 NA NA 0 0 258 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 22 NA NA 0 0 258 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0006 X NA NA 0 0 258 0 0 0 0 0 NA 0.48 NA 0 NA NA NA NA 16 11 11 0 0 0 0 0 0 Whitelist PACA-AU NA 0.72 0 NA NA 0 No PACA-AU ICGC_0006 PACA 0.41 3.23 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578197_-_C,CN:2 6 PACA-AU DO32831 ICGC_0006 female alive C25.1 49 1715 1715 NA Included Panc-AdenoCA PACA AU 1 56.41 PACA-AU::ICGC_0007 1 38813433 49397759 28 29 82 3 8 8 9 1 0.37 0 45 0 0 45 7 13 52 7 13 19.33 56.66 43.34 4 5 6 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA With other complex events 57 0.35 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 2 192572580 197367003 2 2 82 0 0 1 1 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 19.33 0 99.91 0 2 NA Whitelist PACA-AU 0.68 0.15 NA 0 0.64 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 3 34144513 53061106 1 1 82 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 19.33 0 99.97 0 2 NA Whitelist PACA-AU 0.62 0.11 NA NA 0.59 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 4 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 5 NA NA 0 0 82 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.2 NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 6 161835035 161895028 1 1 82 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA 7 4 7 19.33 18.89 77.88 0 2 3 Whitelist PACA-AU 0.62 0.48 NA NA 0.59 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 7 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 8 NA NA 0 0 82 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.95 NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 9 6762754 23096938 3 3 82 0 0 2 1 0 0.3 1 3 0.01 0 NA NA NA 4 3 3 19.33 28.96 70.34 0 1 0 Whitelist PACA-AU 0.62 1 0.01 0 0.59 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 6 0.04 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 10 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 11 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 12 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 13 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 14 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 16 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 17 47498985 79507305 8 8 82 3 1 2 2 0 0.8 0 12 0 0 12 12 12 14 14 14 19.33 60.65 34.9 5 1 2 Whitelist PACA-AU 0.87 0.01 0 0 0.84 1 High confidence PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA Canonical without polyploidization 16 0.1 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 18 14205305 30018589 4 4 82 1 1 1 1 0 1 0.02 5 0 0 5 5 5 10 7 7 19.33 56.3 43.67 0 2 3 Whitelist PACA-AU 1 0.09 0 0 1 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 8 0.05 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 19 5041231 49185765 1 5 82 3 0 0 1 1 0.11 0.02 15 0 0 15 5 5 15 5 5 19.33 40.7 52.02 0 2 1 Whitelist PACA-AU 0.62 0.09 0 0 0.48 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 9 0.05 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 20 1226919 53870564 9 9 82 2 1 3 3 0 0.75 0 16 0 0 16 13 16 17 13 13 19.33 11.39 81.59 0 2 1 Whitelist PACA-AU 0.85 0 0 0 0.83 1 High confidence PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA Canonical without polyploidization 18 0.11 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 22 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0007 X NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0007 PACA 0.47 1.83 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32833 ICGC_0007 female deceased C25.0 74 56 56 NA Included Panc-AdenoCA PACA AU 1 1.84 PACA-AU::ICGC_0009 1 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 2 NA NA 0 0 41 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.5 NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 3 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 4 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 5 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 6 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 7 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 8 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 9 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 10 80347920 132334500 31 31 41 5 14 7 5 0 0.07 0 31 0 0 31 5 6 35 5 6 14.34 29.08 70.8 2 1 4 Whitelist PACA-AU 0.54 0 0 0 0.48 0 Low confidence PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA With other complex events 62 0.76 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 11 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 12 NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 13 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 14 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 15 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 16 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 17 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 18 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 19 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 20 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 21 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 22 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0009 X NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0009 PACA 0.7 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-AU DO32837 ICGC_0009 male deceased C25.0 34 399 399 NA Included Panc-AdenoCA PACA AU 1 13.12 PACA-AU::ICGC_0020 1 19294524 63074554 1 2 57 1 1 0 0 0 0.57 0.32 4 NA 0 4 3 4 5 3 3 29.83 0.13 99.87 0 2 1 Whitelist PACA-AU 0.68 0.57 NA 0 0.64 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 2 NA NA 0 0 57 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.25 NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 3 157660496 157708587 1 1 57 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 3 3 29.83 0.03 99.94 0 2 3 Whitelist PACA-AU 0.62 0.69 NA NA 0.59 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 4 66966192 67100500 1 1 57 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 29.83 0 99.99 0 2 NA Whitelist PACA-AU 0.62 0.4 NA NA 0.59 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 5 NA NA 0 0 57 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 6 36021238 98348848 7 13 57 3 0 2 2 6 0.44 0 9 0 0 9 9 9 30 23 23 29.83 51.9 47.93 11 1 2 Whitelist PACA-AU 11 0.68 0 0 0 0.64 1 High confidence PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA Canonical without polyploidization 20 0.18 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 7 70478609 118316234 1 1 57 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 29.83 30.06 69.71 0 2 3 Whitelist PACA-AU 0.62 0.62 NA NA 0.59 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 8 NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.62 NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 9 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 10 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 11 2734690 58550648 3 10 57 1 0 1 1 7 0.8 0 12 0 0 12 12 12 16 16 16 29.83 61.81 37.77 2 1 2 Whitelist PACA-AU 0.96 0 0 0 0.84 1 High confidence PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA Canonical without polyploidization 13 0.11 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 12 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 14 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 16 78910830 78934049 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.83 0.03 99.87 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 17 20526033 53051570 1 1 57 0 0 1 0 0 0.39 0.67 2 NA NA NA NA NA NA NA NA 29.83 59.94 40.06 0 1 2 Whitelist PACA-AU 0.62 0.87 NA NA 0.59 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 18 20818983 70210077 3 10 57 0 1 1 1 7 0.8 0 8 0 0 8 3 4 14 4 6 29.83 77.11 18.25 6 1 4 Whitelist PACA-AU 6 0.68 0 0 0 0.84 1 Linked to high confidence PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA With other complex events 13 0.11 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0020 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0020 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578266_A_T,CN:1 2 PACA-AU DO32860 ICGC_0020 male deceased C25.0 57 1259 1259 NA Included Panc-AdenoCA PACA AU 1 41.41 PACA-AU::ICGC_0021 1 174795540 235809777 1 3 162 2 1 0 0 0 0.3 0.01 6 0 0 6 4 6 10 5 6 67.29 48.25 48.78 0 4 2 Whitelist PACA-AU 0.62 0.04 0 0 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 2 38703963 41813341 2 2 162 0 0 1 1 0 0.57 0 4 0 0 4 4 4 10 5 9 67.29 96.84 0.56 0 2 5 Whitelist PACA-AU 0.68 0.02 0 0 0.64 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 3 60610937 71359021 2 4 162 4 0 0 0 0 0.01 0.05 6 0 0 6 3 4 9 5 6 67.29 99.85 0.1 0 1 2 Whitelist PACA-AU 0.21 0.15 0 0 0.16 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 4 91482681 110419706 1 4 162 4 0 0 0 0 0.01 0.08 6 0 0 6 4 6 8 4 7 67.29 15.76 84.22 0 1 2 Whitelist PACA-AU 0.21 0.23 0 0 0.16 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 5 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 6 162648840 162781030 2 2 162 2 0 0 0 0 0.11 0.74 3 0 0 NA NA NA 10 4 5 67.29 99.85 0.01 0 1 3 Whitelist PACA-AU 0.54 0.91 0 0 0.48 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 7 110304123 157327328 1 2 162 1 1 0 0 0 0.57 0.05 2 0.01 0 NA NA NA 4 3 3 67.29 99.65 0.11 0 2 3 Whitelist PACA-AU 0.68 0.17 0.01 0 0.64 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 8 43630314 136270897 3 4 162 1 2 0 0 1 0.3 1 15 0 0 15 4 5 17 4 4 67.29 89.78 6.8 1 3 2 Whitelist PACA-AU 0.68 1 0 0 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 9 21119816 101563539 1 3 162 2 0 0 1 0 0.3 0.54 4 0 0 4 3 4 5 3 5 67.29 0.74 98.56 3 2 0 Whitelist PACA-AU 0.62 0.77 0 0 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 10 83712584 84033604 1 2 162 1 1 0 0 0 0.57 0.13 1 0 0 NA NA NA NA NA NA 67.29 99.82 0 0 3 NA Whitelist PACA-AU 0.68 0.32 0 0 0.64 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 11 29261830 29311128 1 1 162 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 3 3 67.29 66.24 33.33 0 2 3 Whitelist PACA-AU 0.62 0.04 NA NA 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 12 NA NA 0 0 162 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.13 NA NA NA 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 13 28846794 108724470 1 2 162 1 1 0 0 0 0.57 0.19 2 NA 0 NA NA NA NA NA NA 67.29 99.21 0.79 0 2 4 Whitelist PACA-AU 0.68 0.41 NA 0 0.64 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 14 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 15 80216182 80602132 1 1 162 0 0 0 1 0 0.39 0.81 2 0 NA NA NA NA 5 3 3 67.29 40.27 59.63 0 1 2 Whitelist PACA-AU 0.62 0.95 0 NA 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 16 78604308 79152937 1 5 162 2 1 1 1 0 0.9 0.21 6 0 0 6 3 5 9 3 4 67.29 57.23 37.81 0 1 2 Whitelist PACA-AU 0.93 0.44 0 0 0.92 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 17 55762200 57921164 1 3 162 1 1 1 0 0 0.8 0.63 5 0 0 5 4 5 7 4 5 67.29 68.22 27.34 0 1 4 Whitelist PACA-AU 0.87 0.84 0 0 0.84 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 18 394262 19382550 33 33 162 11 2 11 9 0 0.08 0 42 0 0 42 5 8 44 5 5 67.29 93.15 1.61 11 3 8 Whitelist PACA-AU 0.54 0 0 0 0.48 1 Low confidence PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA With other complex events 66 0.2 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 19 28278241 58069967 33 33 162 7 13 7 6 0 0.29 0 48 0 0 48 13 17 48 13 13 67.29 92.72 0 2 5 4 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA With other complex events 66 0.2 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 20 14623999 15203507 3 3 162 3 0 0 0 0 0.03 0 8 0 0 8 0 3 9 0 3 67.29 98.97 0.06 0 1 3 Whitelist PACA-AU 0.41 0.02 0 0 0.33 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 21 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 22 18065942 22043524 3 3 162 0 2 1 0 0 0.3 0 11 0 0 11 3 3 24 6 7 67.29 58.94 29.95 0 8 2 Whitelist PACA-AU 0.62 0 0 0 0.59 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0021 X NA NA 0 0 162 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.08 NA NA NA 1 No PACA-AU ICGC_0021 PACA 0.43 2.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578262_G_C,CN:2 2 PACA-AU DO32863 ICGC_0021 male deceased C25.0 60 715 715 NA Included Panc-AdenoCA PACA AU 1 23.52 PACA-AU::ICGC_0025 1 152793278 227429822 6 6 118 1 1 2 2 0 0.88 0.23 8 0 0 8 5 8 17 5 5 43.93 10.38 89.62 0 2 1 Whitelist PACA-AU 0.93 0.46 0 0 0.91 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 12 0.05 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 2 36647859 81163234 2 4 118 0 0 2 2 0 0.26 0.06 1 0 0 NA NA NA 7 7 7 43.93 3.25 96.65 0 2 NA Whitelist PACA-AU 0.62 0.2 0 0 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 8 0.03 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 3 174684229 175152856 2 2 118 2 0 0 0 0 0.11 0.86 2 0 0 NA NA NA 6 4 4 43.93 60.33 39.54 0 1 2 Whitelist PACA-AU 0.54 0.99 0 0 0.48 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 4 173446217 173476177 1 1 118 0 1 0 0 0 0.39 0.85 1 0 NA NA NA NA 4 4 4 43.93 70.65 29.25 0 1 NA Whitelist PACA-AU 0.62 0.99 0 NA 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 5 NA NA 0 0 118 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 NA NA NA 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 6 17053808 162631121 1 9 118 8 0 0 0 1 0 0.08 10 0 0 10 10 10 13 11 11 43.93 12.44 87.39 0 1 2 Whitelist PACA-AU 0 0.22 0 0 0 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 17 0.07 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 7 93519827 153063819 6 6 118 3 0 2 1 0 0.34 0.06 7 0 0 7 4 5 12 4 5 43.93 93.66 3.62 3 1 3 Whitelist PACA-AU 0.62 0.2 0 0 0.59 0 Low confidence PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA With other complex events 12 0.05 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 8 52295412 106599640 1 3 118 3 0 0 0 0 0.03 0.84 7 0 0 7 6 7 10 8 8 43.93 46.78 53.21 0 1 2 Whitelist PACA-AU 0.41 0.97 0 0 0.33 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 6 0.03 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 9 21947794 22055389 1 1 118 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 43.93 99.33 0 0 0 1 Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 10 84030751 84491314 1 2 118 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 43.93 0.34 99.48 0 1 2 Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 11 19274842 20613902 3 7 118 2 1 0 0 4 0.3 0 3 0 0 NA NA NA 14 4 4 43.93 87.05 12.53 0 1 0 Whitelist PACA-AU 0.96 0 0 0 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 10 0.04 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 12 NA NA 0 0 118 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.16 NA NA NA 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 13 82560119 82964984 2 2 118 0 0 1 1 0 0.57 0.8 4 0 0 4 4 4 5 5 5 43.93 0.33 99.67 2 1 2 Whitelist PACA-AU 0.68 0.95 0 0 0.64 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 14 67588738 67623127 1 1 118 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 43.93 98.21 0.88 0 1 NA Whitelist PACA-AU 0.62 0.41 NA NA 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 15 27932219 74820502 1 4 118 0 3 0 0 1 0.03 0.57 1 0 0 NA NA NA NA NA NA 43.93 0 100 0 2 NA Whitelist PACA-AU 0.54 0.8 0 0 0.33 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 7 0.03 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 16 78691469 78849143 1 2 118 2 0 0 0 0 0.11 0.77 4 NA 0 4 3 4 5 3 3 43.93 0.17 99.73 0 1 0 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 17 41128023 78410178 1 2 118 1 1 0 0 0 0.57 0.77 2 NA 0 NA NA NA 4 4 4 43.93 27.58 67.97 0 1 2 Whitelist PACA-AU 0.68 0.93 NA 0 0.64 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 18 7859501 25457224 4 5 118 1 1 1 1 1 1 0 4 0 0 4 0 3 8 3 3 43.93 63.59 36.39 4 1 2 Whitelist PACA-AU 0.93 0 0 0 1 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 9 0.04 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 19 28243253 55502550 1 3 118 2 0 0 0 1 0.11 0.51 5 NA 0 5 3 3 5 3 3 43.93 70.94 21.78 0 1 2 Whitelist PACA-AU 0.62 0.75 NA 0 0.48 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 5 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 20 15037134 42227760 1 2 118 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 43.93 0.18 98.83 0 1 2 Whitelist PACA-AU 0.54 1 NA 0 0.48 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 21 NA NA 0 0 118 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 22 30022476 30043324 1 1 118 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 43.93 100 0 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0025 X 19976010 20064826 2 2 118 0 0 1 1 0 0.57 0.53 1 0 0 NA NA NA NA NA NA 43.93 100 0 0 1 NA Whitelist PACA-AU 0.68 0.76 0 0 0.64 0 No PACA-AU ICGC_0025 PACA 0.51 1.65 Panc-AdenoCA NA 4 0.02 NA 1 PACA-AU DO32875 ICGC_0025 male deceased C25.0 69 348 348 NA Included Panc-AdenoCA PACA AU 1 11.45 PACA-AU::ICGC_0026 1 174192627 174824065 1 1 66 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA 4 4 4 79.01 42.55 57.45 0 2 3 Whitelist PACA-AU 0.62 0.19 NA NA 0.59 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 2 0.02 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 2 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 3 30201791 60451279 1 3 66 3 0 0 0 0 0.03 1 6 0 0 6 6 6 8 7 7 79.01 96.85 0 0 0 3 Whitelist PACA-AU 0.41 1 0 0 0.33 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 6 0.05 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 4 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 5 45704549 45716765 1 1 66 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 79.01 97.11 0.01 0 2 4 Whitelist PACA-AU 0.62 0.32 NA NA 0.59 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 2 0.02 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 6 16199091 33417980 2 2 66 1 1 0 0 0 0.57 0.6 3 0 0 NA NA NA 12 5 5 79.01 72.63 24.18 0 2 3 Whitelist PACA-AU 0.68 0.81 0 0 0.64 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 4 0.03 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 7 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 8 112361704 112779594 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 3 5 79.01 68.35 28.23 0 6 8 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 2 0.02 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 9 19273702 34102925 1 2 66 0 0 0 1 1 0.39 1 3 NA NA NA NA NA 4 4 4 79.01 76.83 22.47 0 3 2 Whitelist PACA-AU 0.68 1 NA NA 0.59 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 3 0.02 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 10 NA NA 0 0 66 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 11 NA NA 0 0 66 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 12 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 13 34302106 94878192 1 5 66 3 0 0 1 1 0.11 0 13 0 0 13 3 5 15 3 5 79.01 97.22 0 7 11 0 Whitelist PACA-AU 0.45 0 0 0 0.48 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 9 0.07 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 14 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 15 22891529 92856416 8 9 66 3 0 2 3 1 0.39 0 20 0 0 20 20 20 22 21 22 79.01 83.07 11.99 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA Canonical without polyploidization 17 0.13 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 16 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 17 8889853 19188754 3 4 66 1 0 1 1 1 0.8 0 17 0 0 17 7 11 24 7 7 79.01 82.29 13.27 6 3 2 Whitelist PACA-AU 0.68 0 0 0 0.84 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 7 0.05 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 18 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 19 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 20 15332804 15468434 1 1 66 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 79.01 99.01 0 0 4 6 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 2 0.02 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 21 10965964 42269757 2 2 66 0 1 0 1 0 0.57 0.19 1 NA 0 NA NA NA NA NA NA 79.01 77.35 0 0 3 NA Whitelist PACA-AU 0.68 0.41 NA 0 0.64 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 4 0.03 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 22 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA NA 0 0 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0026 X 30577518 57551527 14 14 66 4 2 3 5 0 0.7 0 22 0 0 22 4 8 24 4 8 79.01 36.84 59.42 0 2 4 Whitelist PACA-AU 0.81 0 0 0 0.78 1 Low confidence PACA-AU ICGC_0026 PACA 0.62 3.55 Panc-AdenoCA With other complex events 28 0.21 NA 5 PACA-AU DO32878 ICGC_0026 female deceased C25.0 69 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0031 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 3 20319589 174852806 1 4 27 2 0 1 0 1 0.3 0 6 0 0 6 6 6 11 11 11 30.46 99.95 0 0 0 1 Whitelist PACA-AU 7 0.68 0 0 0 0.59 1 Linked to high confidence PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA Canonical without polyploidization 7 0.13 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 6 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 7 89045625 146695947 6 11 27 0 3 2 1 5 0.34 0 10 0 0 10 10 10 13 13 13 30.46 13.17 86.59 0 1 2 Whitelist PACA-AU 3 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA Canonical without polyploidization 17 0.31 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 9 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 11 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 13 68878227 69058983 1 1 27 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 30.46 0.16 99.84 0 1 2 Whitelist PACA-AU 0.62 0.83 NA NA 0.59 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 15 NA NA 0 0 27 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 16 78638273 78685388 1 1 27 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 30.46 0 99.54 1 2 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 17 11097091 50164473 1 2 27 1 0 1 0 0 0.57 0.04 4 0 0 4 3 4 5 3 3 30.46 56.95 43.05 0 1 0 Whitelist PACA-AU 0.68 0.13 0 0 0.64 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 18 18530074 19385725 2 2 27 0 0 1 1 0 0.57 0.16 2 NA 0 NA NA NA 5 5 5 30.46 93.64 1.73 0 1 2 Whitelist PACA-AU 0.68 0.37 NA 0 0.64 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 20 61035498 61322806 1 1 27 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 30.46 0.46 98.58 0 1 2 Whitelist PACA-AU 0.62 0.69 NA NA 0.59 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0031 X 7190442 7245541 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 30.46 0.04 99.74 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0031 PACA 0.42 1.68 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-AU DO32893 ICGC_0031 female deceased C25.0 61 1077 1077 NA Included Panc-AdenoCA PACA AU 1 35.43 PACA-AU::ICGC_0033 1 9408363 233504950 1 24 192 2 9 0 2 11 0 0.01 20 0 0 20 19 20 21 19 19 42.8 1.45 98.55 0 2 3 Whitelist PACA-AU 3 0.54 0.03 0 0 0.09 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 37 0.1 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 2 39658542 43450290 7 7 192 1 6 0 0 0 0 0.79 9 0 0 9 4 5 22 5 5 42.8 97.49 2.4 0 6 7 Whitelist PACA-AU 0.13 0.95 0 0 0.09 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 3 57015211 188363451 1 17 192 1 4 0 0 12 0.04 0.12 14 0 0 14 5 11 15 5 5 42.8 96.62 0.21 0 3 4 Whitelist PACA-AU 1 0.68 0.3 0 0 0.36 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 22 0.06 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 4 73620967 73808176 3 3 192 1 2 0 0 0 0.3 0.89 3 0 0 NA NA NA 13 6 6 42.8 0.31 99.48 0 2 3 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 5 62948332 63304647 2 2 192 0 0 1 1 0 0.57 0.76 1 0 0 NA NA NA 4 3 4 42.8 27.43 69.9 0 2 NA Whitelist PACA-AU 0.68 0.93 0 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 6 7658853 21621250 3 4 192 0 1 1 1 1 0.8 0 12 0 0 12 5 6 25 8 13 42.8 41.33 58.52 4 2 5 Whitelist PACA-AU 0.68 0 0 0 0.84 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 7 7248407 18106668 5 5 192 0 3 1 1 0 0.28 0.26 8 0 0 8 4 8 20 10 10 42.8 75.69 21.62 0 6 5 Whitelist PACA-AU 0.62 0.5 0 0 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 8 101155052 129754804 1 11 192 1 6 1 0 3 0.01 0 13 0 0 13 4 4 19 4 5 42.8 33.76 62.17 0 8 3 Whitelist PACA-AU 0.13 0.01 0 0 0.21 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 9 8411574 36363034 1 3 192 1 2 0 0 0 0.3 0.13 4 0 0 4 4 4 6 5 5 42.8 31.06 68.24 0 3 4 Whitelist PACA-AU 0.62 0.32 0 0 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 10 25492958 96523476 1 2 192 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 42.8 0.17 99.65 0 2 3 Whitelist PACA-AU 0.54 0.06 NA 0 0.48 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 11 102878040 125701193 1 2 192 1 1 0 0 0 0.57 0.01 3 NA 0 NA NA NA 4 3 3 42.8 38.27 58.18 0 2 1 Whitelist PACA-AU 0.68 0.05 NA 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 12 32747863 32834483 2 2 192 0 2 0 0 0 0.11 0.06 1 0 0 NA NA NA 9 5 9 42.8 0.49 95.42 0 4 NA Whitelist PACA-AU 0.54 0.18 0 0 0.48 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 13 25747298 89604004 1 2 192 2 0 0 0 0 0.11 0.07 1 NA 0 NA NA NA NA NA NA 42.8 100 0 0 3 NA Whitelist PACA-AU 0.54 0.21 NA 0 0.48 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 14 22322617 34708454 2 2 192 0 0 1 1 0 0.57 0.53 1 0 0 NA NA NA NA NA NA 42.8 0 96.29 0 2 NA Whitelist PACA-AU 0.68 0.77 0 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 15 45674131 101833660 1 11 192 0 3 0 1 7 0.11 0 11 0 0 11 5 7 12 6 8 42.8 0.84 99.04 0 2 3 Whitelist PACA-AU 0.62 0.02 0 0 0.48 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 16 2154753 74470815 1 3 192 0 3 0 0 0 0.03 0.5 5 0.03 0 5 5 5 7 5 5 42.8 99.85 0.04 0 3 4 Whitelist PACA-AU 0.41 0.74 0.03 0 0.33 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 17 35453750 36464185 2 3 192 0 0 1 1 1 0.57 1 3 0 0 NA NA NA 6 3 3 42.8 10.05 85.36 0 2 18 Whitelist PACA-AU 0.87 1 0 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 18 18622075 60450473 1 2 192 1 0 0 1 0 0.57 0.82 8 0 0 8 3 4 9 3 3 42.8 21.68 73.68 4 2 14 Whitelist PACA-AU 0.68 0.96 0 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 19 28608377 45129759 3 4 192 0 0 2 1 1 0.3 0 4 0 0 4 4 4 17 6 7 42.8 58.75 32.7 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 20 NA NA 0 0 192 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.33 NA NA NA 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 21 27200232 27305734 1 1 192 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.8 0.22 77.13 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 22 38314586 38344909 1 1 192 0 1 0 0 0 0.39 0.3 1 0 NA NA NA NA 6 3 4 42.8 77.63 22.37 0 6 NA Whitelist PACA-AU 0.62 0.54 0 NA 0.59 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0033 X 106542507 106772301 2 2 192 0 0 1 1 0 0.57 0.32 1 0 0 NA NA NA NA NA NA 42.8 99.79 0 0 1 NA Whitelist PACA-AU 0.68 0.57 0 0 0.64 0 No PACA-AU ICGC_0033 PACA 1 2.5 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 2 PACA-AU DO32900 ICGC_0033 male deceased C25.0 51 768 768 NA Included Panc-AdenoCA PACA AU 1 25.26 PACA-AU::ICGC_0037 1 240179982 240688305 21 21 165 3 7 6 5 0 0.64 0 12 0 0 12 12 12 20 18 18 54.1 34.46 62.57 0 2 3 Whitelist PACA-AU 0.76 0.01 0 0 0.72 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 42 0.13 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 False positive; manually removed PACA-AU::ICGC_0037 2 102676662 207123661 1 5 165 1 2 0 0 2 0.3 0.01 3 0 0 NA NA NA NA NA NA 54.1 99.9 0 0 3 6 Whitelist PACA-AU 0.68 0.05 0 0 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 8 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 3 149109207 184669224 2 3 165 1 1 0 0 1 0.57 0.36 1 0 0 NA NA NA 4 4 4 54.1 59.42 37.5 0 3 NA Whitelist PACA-AU 0.87 0.61 0 0 0.64 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 5 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 4 91473133 155226686 1 3 165 3 0 0 0 0 0.03 0.03 5 0 0 5 5 5 5 5 5 54.1 1.58 98.4 0 2 1 Whitelist PACA-AU 0.41 0.1 0 0 0.33 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 6 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 5 27828980 81221463 3 18 165 1 2 0 0 15 0.3 0 10 0 0 10 3 7 12 4 7 54.1 43.57 56.29 7 3 2 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 21 0.06 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 6 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 7 33580986 124700027 1 5 165 4 0 0 1 0 0.04 0.61 7 0 0 7 3 5 11 3 4 54.1 52.43 45.01 0 2 4 Whitelist PACA-AU 0.45 0.82 0 0 0.36 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 10 0.03 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 8 43408491 131953499 2 4 165 3 1 0 0 0 0.11 0 9 0 0 9 0 5 20 7 8 54.1 83.5 13.08 1 3 6 Whitelist PACA-AU 0.54 0.01 0 0 0.48 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 8 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 9 13766699 22217489 4 4 165 1 1 1 1 0 1 0.01 7 0 0 7 6 7 11 6 7 54.1 71.99 27.31 0 0 3 Whitelist PACA-AU 1 0.06 0 0 1 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 8 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 10 58338391 59650609 5 5 165 1 0 0 4 0 0.04 0.06 8 0 0 8 8 8 22 11 11 54.1 74.2 22.34 1 3 4 Whitelist PACA-AU 0.45 0.18 0 0 0.36 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 10 0.03 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 11 2206130 2993821 1 1 165 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 0 3 54.1 95.95 0.58 0 2 4 Whitelist PACA-AU 0.62 0.04 NA NA 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 12 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 13 22638525 90523945 7 31 165 2 0 4 1 24 0.17 0 13 0 0 13 6 13 19 7 8 54.1 62.15 37.85 20 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA With other complex events 38 0.12 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 14 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 15 25363660 25461894 1 1 165 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 54.1 0.1 99.77 0 1 2 Whitelist PACA-AU 0.62 0.26 NA NA 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 16 78595024 78779141 3 3 165 3 0 0 0 0 0.03 0.05 6 0 0 6 5 6 15 6 6 54.1 84.17 15.73 0 2 1 Whitelist PACA-AU 0.41 0.15 0 0 0.33 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 6 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 17 29086872 29321380 1 1 165 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA 6 4 4 54.1 67.93 27.64 0 2 NA Whitelist PACA-AU 0.62 0.59 NA NA 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 18 48596330 48654044 1 2 165 2 0 0 0 0 0.11 0.09 4 0 0 4 0 3 11 3 3 54.1 21.14 74.22 0 2 0 Whitelist PACA-AU 0.54 0.25 0 0 0.48 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 4 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 19 21564139 22548813 8 8 165 3 3 0 2 0 0.39 0 9 0 0 9 9 9 13 9 9 54.1 88.71 3.86 4 2 1 Whitelist PACA-AU 0.62 0.01 0 0 0.59 0 High confidence PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA Canonical without polyploidization 16 0.05 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 20 14808482 14883629 1 1 165 0 1 0 0 0 0.39 0.78 1 NA NA NA NA NA NA NA NA 54.1 99.03 0 0 4 NA Whitelist PACA-AU 0.62 0.94 NA NA 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 21 NA NA 0 0 165 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 22 28350690 48310013 1 2 165 2 0 0 0 0 0.11 0.72 4 NA 0 4 4 4 6 5 6 54.1 95.2 3.42 3 2 4 Whitelist PACA-AU 0.54 0.9 NA 0 0.48 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 4 0.01 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0037 X 4199261 88399280 1 3 165 2 1 0 0 0 0.3 0.29 1 0.06 0 NA NA NA NA NA NA 54.1 0 99.52 0 2 NA Whitelist PACA-AU 0.62 0.53 0.06 0 0.59 0 No PACA-AU ICGC_0037 PACA 0.48 2.75 Panc-AdenoCA NA 6 0.02 NA 3 PACA-AU DO32916 ICGC_0037 male deceased C25.1 78 154 154 NA Included Panc-AdenoCA PACA AU 1 5.07 PACA-AU::ICGC_0048 1 31830844 110468888 1 3 26 1 2 0 0 0 0.3 0.05 6 0 0 6 3 6 12 4 4 25.35 59.66 37.36 0 2 1 Whitelist PACA-AU 0.62 0.16 0 0 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 6 0.12 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 3 76765588 76883206 1 1 26 1 0 0 0 0 0.39 0.42 2 0 NA NA NA NA 5 5 5 25.35 0.06 99.82 0 1 2 Whitelist PACA-AU 0.62 0.67 0 NA 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 5 4524033 165785031 1 1 26 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.35 10.73 89.14 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 6 NA NA 0 0 26 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.87 NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 9 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 11 80548941 80586339 1 1 26 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.35 99.57 0 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 13 NA NA 0 0 26 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.18 0 NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 14 37372882 67470430 1 3 26 1 0 1 0 1 0.57 0.05 5 NA 0 5 5 5 7 7 7 25.35 99.09 0 0 1 6 Whitelist PACA-AU 0.87 0.16 NA 0 0.64 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 5 0.1 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 15 NA NA 0 0 26 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 17 48846282 79971622 1 1 26 0 0 0 1 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 25.35 38.34 61.64 0 1 2 Whitelist PACA-AU 0.62 0.36 NA NA 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 18 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.75 NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 20 14750428 14800844 2 2 26 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 25.35 0 99.02 0 2 NA Whitelist PACA-AU 0.68 0.01 0 0 0.64 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 4 0.08 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0048 X 121394104 121405597 1 1 26 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.35 0 99.78 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0048 PACA 0.57 1.94 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO32960 ICGC_0048 female alive C25.0 65 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0051 1 228189441 228324722 2 2 20 0 0 1 1 0 0.57 0.67 1 NA 0 NA NA NA NA NA NA 20.45 0 100 0 2 NA Whitelist PACA-AU 0.68 0.87 NA 0 0.64 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 4 0.1 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 2 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 3 60499855 117558267 1 3 20 3 0 0 0 0 0.03 0.05 4 0 0 4 4 4 5 5 5 20.45 0.38 99.5 0 0 2 Whitelist PACA-AU 0.41 0.16 0 0 0.33 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 6 0.15 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 4 184211323 184571355 3 3 20 1 0 1 1 0 0.8 0.04 1 0 0 NA NA NA NA NA NA 20.45 0.03 99.96 0 2 NA Whitelist PACA-AU 0.87 0.14 0 0 0.84 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 6 0.15 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 7 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 9 21985059 22621446 1 1 20 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 20.45 0.45 99.4 0 0 2 Whitelist PACA-AU 0.62 0.78 NA NA 0.59 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 2 0.05 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 10 84254217 84287403 1 1 20 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 20.45 0.02 99.8 0 0 2 Whitelist PACA-AU 0.62 0.82 NA NA 0.59 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 2 0.05 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 12 52330792 52426240 1 1 20 1 0 0 0 0 0.39 0.62 2 NA NA NA NA NA 5 3 5 20.45 99.92 0 0 0 3 Whitelist PACA-AU 0.62 0.83 NA NA 0.59 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 2 0.05 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 16 78617101 78782390 1 2 20 2 0 0 0 0 0.11 0.02 4 0 0 4 4 4 5 5 5 20.45 0.11 99.79 0 0 2 Whitelist PACA-AU 0.54 0.07 0 0 0.48 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 4 0.1 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 20 14574228 14625698 1 1 20 0 1 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 20.45 99.02 0 0 4 5 Whitelist PACA-AU 0.62 0.61 NA NA 0.59 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 2 0.05 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 22 NA NA 0 0 20 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.44 NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0051 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0051 PACA 0.46 2.31 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO32972 ICGC_0051 male deceased C25.0 66 605 605 NA Included Panc-AdenoCA PACA AU 1 19.9 PACA-AU::ICGC_0052 1 17886301 17905189 1 1 83 0 0 1 0 0 0.39 0.41 2 NA NA NA NA NA 9 3 3 62.24 51.08 45.95 0 4 9 Whitelist PACA-AU 0.62 0.66 NA NA 0.59 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 2 48738315 52166109 4 4 83 1 2 0 1 0 0.57 0.03 16 0 0 16 4 6 24 5 6 62.24 77.61 19.79 0 4 5 Whitelist PACA-AU 0.68 0.1 0 0 0.64 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 3 NA NA 0 0 83 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.11 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 4 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 5 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 6 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 7 89861910 89931971 1 1 83 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 62.24 99.78 0 0 3 4 Whitelist PACA-AU 0.62 0.58 NA NA 0.59 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 8 NA NA 0 0 83 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-AU NA 0.32 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 9 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 10 NA NA 0 0 83 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 11 74827612 84623250 9 9 83 2 4 2 1 0 0.55 0 26 0 0 26 3 6 33 4 7 62.24 76.13 19.46 13 3 8 Whitelist PACA-AU 0.68 0 0 0 0.64 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 18 0.11 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 12 38277417 38379169 2 2 83 0 0 2 0 0 0.11 0.8 3 0 0 NA NA NA 6 0 3 62.24 25.17 71.08 1 5 6 Whitelist PACA-AU 0.54 0.95 0 0 0.48 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 13 NA NA 0 0 83 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 14 NA NA 0 0 83 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 15 54921967 54955376 1 1 83 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 62.24 0.03 99.85 0 1 2 Whitelist PACA-AU 0.62 0.91 NA NA 0.59 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 16 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 17 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 18 NA NA 0 0 83 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 19 37870566 39024537 5 5 83 2 2 1 0 0 0.53 0 7 0 0 7 3 3 22 4 4 62.24 82.15 17.67 8 3 7 Whitelist PACA-AU 0.68 0 0 0 0.64 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 20 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 21 16837999 44959353 12 13 83 3 0 4 5 1 0.2 0 16 0 0 16 9 16 17 9 9 62.24 31.7 45.65 2 2 3 Whitelist PACA-AU 0.6 0 0 0 0.59 1 High confidence PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA With other complex events 25 0.15 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 22 NA NA 0 0 83 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.84 NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0052 X NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0052 PACA 0.33 2.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PACA-AU DO33042 ICGC_0052 male alive C25.0 76 1424 1424 NA Included Panc-AdenoCA PACA AU 1 46.84 PACA-AU::ICGC_0053 1 177107726 177195381 1 1 37 1 0 0 0 0 0.39 0.53 1 0 NA NA NA NA NA NA NA 21.62 54.84 45.16 0 3 NA Whitelist PACA-AU 0.62 0.76 0 NA 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 2 176452435 233603155 2 4 37 0 0 2 2 0 0.26 0.13 8 0 0 8 8 8 9 9 9 21.62 4.78 95.12 0 1 2 Whitelist PACA-AU 0.62 0.31 0 0 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 8 0.11 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 3 34849530 175423377 1 5 37 4 1 0 0 0 0.04 0.18 8 0 0 8 5 8 9 5 5 21.62 27.11 69.69 0 1 0 Whitelist PACA-AU 0.45 0.4 0 0 0.36 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 10 0.14 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 4 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 5 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 6 12290093 66668991 1 6 37 2 0 0 1 3 0.3 0 7 0 0 7 4 5 8 4 5 21.62 71.82 27.92 3 2 4 Whitelist PACA-AU 0.93 0.01 0 0 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 9 0.12 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 7 110137142 112351598 3 5 37 1 0 1 1 2 0.8 0 2 0 0 NA NA NA 6 5 6 21.62 57.25 40.03 0 1 2 Whitelist PACA-AU 0.93 0 0 0 0.84 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 8 0.11 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 8 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 11 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 12 64241807 64365866 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.62 0.09 99.83 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 15 NA NA 0 0 37 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.52 NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 16 63519922 79244459 1 2 37 1 1 0 0 0 0.57 0.08 3 NA 0 NA NA NA 4 3 3 21.62 33.24 66.65 0 2 1 Whitelist PACA-AU 0.68 0.22 NA 0 0.64 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 4 0.05 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 17 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 19 11248850 11261738 1 1 37 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 21.62 0 99.83 0 2 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 20 14870971 15026258 1 1 37 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 21.62 0.25 98.78 0 1 2 Whitelist PACA-AU 0.62 0.78 NA NA 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0053 X 141920364 142446385 1 1 37 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA NA NA NA 21.62 99.78 0 0 0 1 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0053 PACA 0.35 1.95 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO32976 ICGC_0053 female deceased C25.0 73 610 610 NA Included Panc-AdenoCA PACA AU 1 20.07 PACA-AU::ICGC_0054 1 27284498 202158095 1 7 156 3 3 0 0 1 0.11 0.1 12 0 0 12 7 11 14 7 11 55.49 84.26 12.4 0 3 1 Whitelist PACA-AU 0.62 0.26 0 0 0.48 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 13 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 2 20632474 231084260 1 11 156 4 1 1 0 5 0.11 0.77 13 0 0 13 8 8 13 8 8 55.49 87.16 10.14 0 3 2 Whitelist PACA-AU 0.54 0.93 0 0 0.48 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 17 0.05 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 3 28388821 28406893 1 1 156 1 0 0 0 0 0.39 0.43 2 0 NA NA NA NA 10 5 6 55.49 46.11 50.81 0 1 2 Whitelist PACA-AU 0.62 0.68 0 NA 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 4 70110847 158702510 1 4 156 2 1 0 0 1 0.3 0.75 8 0 0 8 6 8 12 6 10 55.49 63.79 36.19 0 2 3 Whitelist PACA-AU 0.54 0.92 0 0 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 7 0.02 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 5 1796643 175760299 1 7 156 6 0 0 0 1 0 0.41 14 0 0 14 13 14 15 13 13 55.49 3.79 96.09 0 2 1 Whitelist PACA-AU 0.02 0.66 0 0 0.03 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 13 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 6 24435976 129645335 1 4 156 3 0 0 0 1 0.03 0.87 10 0 0 10 7 10 11 7 11 55.49 0.03 99.74 0 2 1 Whitelist PACA-AU 0.54 1 0 0 0.33 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 7 0.02 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 7 21580527 145822574 1 8 156 6 0 0 0 2 0 0.59 11 0 0 11 4 6 12 5 6 55.49 99.78 0 1 4 3 Whitelist PACA-AU 10 0.28 0.81 0 0 0.03 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 14 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 8 NA NA 0 0 156 0 0 0 0 0 NA 0.2 NA 0.34 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.42 0.34 NA NA 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 9 19923201 77870208 1 6 156 2 2 0 1 1 0.53 0.14 14 0 0 14 5 9 16 5 5 55.49 82.33 14.57 0 4 5 Whitelist PACA-AU 0.68 0.34 0 0 0.64 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 11 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 10 76812786 76835680 2 2 156 0 0 1 1 0 0.57 0.25 4 0 0 4 4 4 13 6 7 55.49 55.26 41.39 0 2 3 Whitelist PACA-AU 0.68 0.49 0 0 0.64 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 11 48578853 80608511 1 5 156 3 0 0 0 2 0.03 0.7 5 0 0 5 3 4 10 3 7 55.49 83.63 12.91 0 3 1 Whitelist PACA-AU 0.45 0.9 0 0 0.33 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 8 0.03 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 12 876665 43228844 1 5 156 0 1 2 0 2 0.3 0.18 3 0 0 NA NA NA 7 4 5 55.49 22.71 77.28 0 2 4 Whitelist PACA-AU 0.62 0.4 0 0 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 8 0.03 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 13 NA NA 0 0 156 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.16 NA NA NA 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 14 NA NA 0 0 156 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA 9 6 7 0 0 0 0 0 0 Whitelist PACA-AU NA 0.96 0 NA NA 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 15 24388923 87821515 1 8 156 4 0 0 0 4 0.01 0.04 9 0 0 9 9 9 9 9 9 55.49 79.75 0.06 0 3 2 Whitelist PACA-AU 0.28 0.15 0 0 0.16 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 12 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 16 544331 558049 1 1 156 1 0 0 0 0 0.39 0.62 2 0.01 NA NA NA NA 8 3 7 55.49 99.9 0.01 0 1 3 Whitelist PACA-AU 0.62 0.83 0.01 NA 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 17 7635680 7647051 1 1 156 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 11 5 5 55.49 33.42 62.12 0 1 2 Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 18 39133784 68902086 1 4 156 2 2 0 0 0 0.26 0.32 3 0 0 NA NA NA 5 3 3 55.49 0.04 94.69 0 2 3 Whitelist PACA-AU 0.62 0.57 0 0 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 8 0.03 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 19 1187863 50544350 1 6 156 5 1 0 0 0 0.01 0.04 15 0 0 15 4 6 17 4 8 55.49 75.26 17.46 0 3 2 Whitelist PACA-AU 0.25 0.13 0 0 0.19 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 12 0.04 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 20 60927311 60979980 1 1 156 0 1 0 0 0 0.39 0.16 1 0 NA NA NA NA 8 4 4 55.49 96.63 2.39 0 2 NA Whitelist PACA-AU 0.62 0.36 0 NA 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 21 NA NA 0 0 156 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 22 48426374 48437868 1 1 156 1 0 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 55.49 76.22 0 0 3 NA Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0054 X 15429361 89235562 1 5 156 3 1 0 0 1 0.11 0.04 5 0 0 5 3 5 8 3 8 55.49 62.55 32.77 0 3 1 Whitelist PACA-AU 0.45 0.14 0 0 0.48 0 No PACA-AU ICGC_0054 PACA 0.36 2.67 Panc-AdenoCA NA 9 0.03 frameshift_insertion,17_7578474_G_-,CN:2 2 PACA-AU DO32980 ICGC_0054 female deceased C25.2 72 78 78 NA Included Panc-AdenoCA PACA AU 1 2.57 PACA-AU::ICGC_0055 1 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 2 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 3 89237658 90399650 1 1 23 0 0 0 1 0 0.39 0.22 2 0 0 NA NA NA NA NA NA 28.45 44.34 52.58 0 1 2 Whitelist PACA-AU 0.62 0.45 0 0 0.59 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 2 0.04 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 4 1693989 2026803 1 1 23 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 28.45 0.17 99.65 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 2 0.04 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 5 NA NA 0 0 23 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.86 NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 6 65372731 71343263 1 1 23 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 28.45 99.83 0 0 1 NA Whitelist PACA-AU 0.62 0.36 NA NA 0.59 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 2 0.04 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 7 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 8 93208403 93860660 2 2 23 0 0 1 1 0 0.57 0.33 2 NA 0 NA NA NA 4 4 4 28.45 29.89 66.69 0 1 2 Whitelist PACA-AU 0.68 0.58 NA 0 0.64 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 4 0.09 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 9 31913973 97303304 7 7 23 0 2 3 2 0 0.44 0 10 0 0 10 9 10 12 10 12 28.45 59.47 37.41 3 2 3 Whitelist PACA-AU 0.68 0 0 0 0.64 1 High confidence PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA Canonical without polyploidization 14 0.3 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 10 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 11 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 12 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 14 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 16 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 17 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 18 53348463 53360692 1 1 23 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 28.45 99.96 0 0 1 NA Whitelist PACA-AU 0.62 0.71 NA NA 0.59 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 2 0.04 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 19 34689874 34711087 1 1 23 0 0 0 1 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 28.45 41.33 58.23 0 3 NA Whitelist PACA-AU 0.62 0.22 NA NA 0.59 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 2 0.04 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0055 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0055 PACA 0.51 1.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578485_T_-,CN:1 2 PACA-AU DO32984 ICGC_0055 male deceased C25.2 61 415 415 NA Included Panc-AdenoCA PACA AU 1 13.65 PACA-AU::ICGC_0059 1 64023910 64103579 1 1 68 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 5 3 3 78.89 96.8 0 0 3 5 Whitelist PACA-AU 0.62 0.15 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 2 21334792 217993868 1 2 68 2 0 0 0 0 0.11 0.28 12 0 0 12 3 7 13 4 7 78.89 99.59 0.31 0 2 4 Whitelist PACA-AU 0.54 0.52 0 0 0.48 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 4 0.03 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 3 78038205 190530121 13 13 68 3 3 4 3 0 0.97 0 44 0 0 44 5 5 45 5 5 78.89 2.54 93.91 0 2 3 Whitelist PACA-AU 0.99 0 0 0 0.98 0 Low confidence PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA With other complex events 26 0.19 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 4 89021758 153459906 1 4 68 4 0 0 0 0 0.01 1 8 0 0 8 4 8 9 5 9 78.89 92.88 7.02 0 4 2 Whitelist PACA-AU 0.21 1 0 0 0.16 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 8 0.06 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 5 NA NA 0 0 68 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.69 NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 6 158969449 159046836 1 1 68 0 1 0 0 0 0.39 0.8 2 NA NA NA NA NA 5 3 3 78.89 88.98 10.77 0 4 6 Whitelist PACA-AU 0.62 0.95 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 7 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 8 100895468 100916526 1 1 68 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 78.89 99.99 0 0 4 NA Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 9 9458716 9684821 1 1 68 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 4 78.89 99.2 0.12 0 0 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 10 127389336 128439433 1 1 68 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 78.89 99.07 0.77 0 2 3 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 11 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 12 27023812 28211270 2 2 68 1 0 1 0 0 0.57 0.01 4 0 0 4 0 4 17 3 4 78.89 46.39 49.87 0 4 5 Whitelist PACA-AU 0.68 0.06 0 0 0.64 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 4 0.03 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 13 111852535 112019146 1 1 68 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 78.89 99.86 0.14 0 2 3 Whitelist PACA-AU 0.62 0.75 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 14 22531124 55619084 1 7 68 1 1 0 0 5 0.57 0 1 0 0 NA NA NA NA NA NA 78.89 96.29 0 0 4 NA Whitelist PACA-AU 0.96 0 0 0 0.64 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 9 0.07 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 16 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 17 NA NA 0 0 68 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 18 48458177 48559722 1 1 68 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 78.89 33.82 66.15 0 0 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 19 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0059 X 102271640 102805327 1 1 68 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 78.89 0.34 99.66 0 0 2 Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0059 PACA 0.44 3.41 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578246_A_-,CN:2 2 PACA-AU DO33000 ICGC_0059 male alive C25.0 68 1258 1258 NA Included Panc-AdenoCA PACA AU 1 41.38 PACA-AU::ICGC_0061 1 34326165 147255437 1 6 117 3 1 0 0 2 0.11 1 7 0 0 7 5 7 14 9 9 23.68 46.98 53.02 1 2 1 Whitelist PACA-AU 6 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 2 18153117 139955451 2 3 117 0 0 1 1 1 0.57 0.24 2 0 0 NA NA NA 5 5 5 23.68 0.05 99.85 0 1 2 Whitelist PACA-AU 0.62 0.48 0 0 0.64 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 3 60846136 60856200 1 1 117 1 0 0 0 0 0.39 0.58 1 0 NA NA NA NA NA NA NA 23.68 0 99.95 0 2 NA Whitelist PACA-AU 0.62 0.81 0 NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 4 1892047 187989550 1 8 117 4 0 0 0 4 0.01 0.26 8 0 0 8 3 8 8 3 3 23.68 19.16 80.84 0 2 1 Whitelist PACA-AU 0.21 0.5 0 0 0.16 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 5 7744647 33704040 3 3 117 0 1 1 1 0 0.8 1 3 0 0 NA NA NA 5 3 3 23.68 0.02 99.83 0 2 1 Whitelist PACA-AU 0.87 1 0 0 0.84 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 6 128208140 165216333 3 4 117 1 1 0 1 1 0.8 0.03 5 0 0 5 5 5 9 9 9 23.68 10.56 89.3 0 2 1 Whitelist PACA-AU 0.68 0.11 0 0 0.84 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 7 20506845 116589838 1 3 117 2 0 0 1 0 0.3 1 5 0 0 5 5 5 5 5 5 23.68 0.01 99.76 1 2 1 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 8 32703160 138776286 2 2 117 0 0 1 1 0 0.57 0.2 5 0 0 5 4 5 5 4 4 23.68 46.82 49.75 0 1 2 Whitelist PACA-AU 0.68 0.43 0 0 0.64 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 9 4242785 31255109 2 2 117 1 0 1 0 0 0.57 0.14 3 0 0 NA NA NA 5 5 5 23.68 19.14 80.15 0 2 1 Whitelist PACA-AU 0.68 0.34 0 0 0.64 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 10 NA NA 0 0 117 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 11 38667113 133328804 1 7 117 3 0 1 1 2 0.28 0.5 3 0 0 NA NA NA 4 3 3 23.68 11.24 88.33 0 1 2 Whitelist PACA-AU 0.68 0.75 0 0 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 12 60543400 73229777 2 3 117 1 1 0 0 1 0.57 0 5 0 0 5 5 5 13 7 7 23.68 62.94 33.38 0 1 2 Whitelist PACA-AU 0.87 0.02 0 0 0.64 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 13 NA NA 0 0 117 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.69 NA NA NA 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 14 68083401 68110604 1 1 117 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 4 4 23.68 13.12 85.96 0 1 2 Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 15 94163317 94174415 1 1 117 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA 4 3 3 23.68 36.62 63.38 0 3 NA Whitelist PACA-AU 0.62 0.34 0 NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 16 55130497 55142847 1 1 117 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 23.68 0.01 99.89 0 1 2 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 17 NA NA 0 0 117 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 18 36345447 61511970 1 3 117 1 0 0 0 2 0.39 0.04 4 0 0 4 3 4 6 3 3 23.68 40.68 59.29 0 1 0 Whitelist PACA-AU 6 0.62 0.13 0 0 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 19 17810011 28817343 1 1 117 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 11 5 5 23.68 79.31 13.05 0 2 3 Whitelist PACA-AU 0.62 0.11 0 NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 20 25384545 26057104 1 1 117 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 6 3 3 23.68 38.7 54.28 0 1 2 Whitelist PACA-AU 0.62 0.58 0 NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 21 NA NA 0 0 117 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.87 NA NA NA 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 22 27337366 27351392 1 1 117 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 23.68 31.18 68.82 0 2 NA Whitelist PACA-AU 0.62 0.37 NA NA 0.59 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0061 X 78700665 151562726 1 4 117 2 0 0 0 2 0.11 0.39 5 0 0 5 4 5 6 4 4 23.68 40.45 59.32 0 2 3 Whitelist PACA-AU 0.54 0.64 0 0 0.48 0 No PACA-AU ICGC_0061 PACA 0.52 1.95 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578508_T_C,CN:1 2 PACA-AU DO33008 ICGC_0061 female deceased C25.0 56 970 970 NA Included Panc-AdenoCA PACA AU 1 31.91 PACA-AU::ICGC_0063 1 62261548 80690864 5 6 70 1 2 0 2 1 0.53 0 13 0 0 13 3 13 30 10 10 86.65 97.03 0 0 6 7 Whitelist PACA-AU 0.93 0.02 0 0 0.64 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 11 0.08 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 2 202346982 211232277 1 1 70 0 0 1 0 0 0.39 0.13 1 NA NA NA NA NA 4 4 4 86.65 97.31 0 0 3 NA Whitelist PACA-AU 0.62 0.32 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 3 4344118 87222595 1 2 70 1 1 0 0 0 0.57 0.49 4 0.01 0.04 4 3 4 5 3 3 86.65 96.45 0.01 0 4 2 Whitelist PACA-AU 0.68 0.73 0.01 0.04 0.64 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 4 NA NA 0 0 70 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 0 NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 5 81686326 85486453 1 1 70 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 86.65 99.88 0 0 3 NA Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 6 158478536 161686510 1 1 70 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 4 4 86.65 99.84 0 0 3 5 Whitelist PACA-AU 0.62 0.69 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 7 NA NA 0 0 70 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 8 34823937 83797178 1 2 70 1 0 0 1 0 0.57 0.78 6 0 0 6 4 5 10 4 5 86.65 79.4 20.59 0 4 6 Whitelist PACA-AU 0.68 0.94 0 0 0.64 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 9 NA NA 0 0 70 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 11 5 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.18 0 NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 10 110168977 110196480 1 1 70 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 86.65 99.8 0.02 0 2 3 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 11 44259832 47885237 1 1 70 0 0 0 1 0 0.39 0.38 2 NA NA NA NA NA 4 0 0 86.65 99.42 0 0 6 7 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 12 2653422 3940808 8 8 70 2 3 2 1 0 0.8 0 11 0 0 11 3 3 16 3 4 86.65 99.92 0 0 15 1 Whitelist PACA-AU 0.87 0 0 0 0.84 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 16 0.11 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 13 21982548 89156385 1 1 70 1 0 0 0 0 0.39 0.31 1 0 NA NA NA NA 6 3 3 86.65 86.92 13.08 0 3 NA Whitelist PACA-AU 0.62 0.56 0 NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 14 43151983 59371921 1 2 70 1 0 0 0 1 0.39 0.01 4 0 NA 4 3 4 11 5 5 86.65 78.32 21.58 0 3 2 Whitelist PACA-AU 0.68 0.03 0 NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 3 0.02 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 15 37897124 81349170 1 1 70 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 86.65 99.9 0 0 4 NA Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 16 58388761 67174948 4 4 70 1 0 2 1 0 0.57 0.04 8 0 0 8 3 5 13 3 3 86.65 44.06 55.58 0 2 5 Whitelist PACA-AU 0.68 0.14 0 0 0.64 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 8 0.06 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 17 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 18 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 19 NA NA 0 0 70 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 6 4 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.16 0 NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 20 NA NA 0 0 70 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 21 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 22 47048979 47071381 1 1 70 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 86.65 100 0 0 1 3 Whitelist PACA-AU 0.62 0.79 NA NA 0.59 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0063 X NA NA 0 0 70 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 0 No PACA-AU ICGC_0063 PACA 0.59 3.65 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33016 ICGC_0063 male alive C25.0 54 1275 1275 NA Included Panc-AdenoCA PACA AU 1 41.94 PACA-AU::ICGC_0066 1 220113230 220170850 1 1 66 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA 11 3 3 83.18 48.25 48.45 0 6 8 Whitelist PACA-AU 0.62 0.39 NA NA 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 2 85204668 85277578 1 1 66 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 83.18 99.89 0 0 4 6 Whitelist PACA-AU 0.62 0.15 NA NA 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 3 116278584 175090397 1 4 66 4 0 0 0 0 0.01 1 7 0 0 7 3 5 8 3 4 83.18 99.91 0.04 0 1 3 Whitelist PACA-AU 0.21 1 0 0 0.16 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 8 0.06 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 4 40606536 168528889 1 3 66 1 2 0 0 0 0.3 0.8 6 0 0 6 3 6 7 3 3 83.18 99.77 0 0 4 6 Whitelist PACA-AU 0.62 0.95 0 0 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 6 0.05 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 5 58363083 112332756 1 5 66 4 1 0 0 0 0.04 0.61 10 0 0 10 8 10 11 9 9 83.18 99.46 0.39 0 4 2 Whitelist PACA-AU 0.45 0.82 0 0 0.36 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 10 0.08 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 6 52352454 102015346 1 3 66 1 2 0 0 0 0.3 1 7 0 0 7 4 6 8 4 6 83.18 34.17 62.99 0 2 4 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 6 0.05 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 7 69696023 152795926 1 2 66 0 0 1 1 0 0.57 0.78 4 0 0 4 0 4 6 3 3 83.18 99.78 0 0 3 4 Whitelist PACA-AU 0.68 0.94 0 0 0.64 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 8 24586632 36724967 3 4 66 0 1 0 2 1 0.3 0.15 3 0 0 NA NA NA 10 6 6 83.18 75.19 24.7 0 8 2 Whitelist PACA-AU 0.62 0.35 0 0 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 7 0.05 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 9 NA NA 0 0 66 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 10 120845693 121139382 2 2 66 0 0 1 1 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 83.18 99.82 0 0 4 6 Whitelist PACA-AU 0.68 0.93 NA 0 0.64 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 11 130187150 130995561 1 1 66 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 83.18 98.98 0.6 0 2 3 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 12 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 13 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 14 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 15 23941952 39581480 16 17 66 5 4 4 3 1 0.92 0 17 0 0 17 4 7 20 6 6 83.18 99.88 0 2 1 6 Whitelist PACA-AU 0.93 0 0 0 0.94 0 Low confidence PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA With other complex events 33 0.25 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 16 78781549 78986310 1 1 66 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 83.18 99.61 0.23 0 2 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 17 7262575 8184272 1 3 66 0 3 0 0 0 0.03 0.26 4 0 0 4 4 4 5 5 5 83.18 99.98 0 0 4 6 Whitelist PACA-AU 0.41 0.51 0 0 0.33 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 6 0.05 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 18 19494676 19569080 1 1 66 0 1 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 83.18 26.76 73.2 0 4 NA Whitelist PACA-AU 0.62 0.89 NA NA 0.59 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 19 33915006 59053909 1 2 66 1 1 0 0 0 0.57 0.37 2 NA 0 NA NA NA 4 3 3 83.18 92.44 0.16 0 2 4 Whitelist PACA-AU 0.68 0.63 NA 0 0.64 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 20 35603285 35809634 2 2 66 0 0 1 1 0 0.57 0.17 2 0 0 NA NA NA 5 5 5 83.18 99.03 0 0 4 6 Whitelist PACA-AU 0.68 0.38 0 0 0.64 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 22 35888164 39160282 1 2 66 0 2 0 0 0 0.11 0.18 2 NA 0 NA NA NA NA NA NA 83.18 100 0 0 4 7 Whitelist PACA-AU 0.54 0.4 NA 0 0.48 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0066 X 32202101 121675134 1 2 66 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 83.18 99.37 0.63 0 2 4 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0066 PACA 0.42 3.85 Panc-AdenoCA NA 4 0.03 NA 4 PACA-AU DO33028 ICGC_0066 male deceased C25.0 58 311 311 NA Included Panc-AdenoCA PACA AU 1 10.23 PACA-AU::ICGC_0067 1 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 2 25311605 26157134 1 1 73 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 3 3 32.18 22.57 77.33 0 0 1 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 3 192313946 193499741 1 1 73 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA 6 6 6 32.18 44.1 52.73 0 1 2 Whitelist PACA-AU 0.62 0.73 NA NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 4 112033631 113570525 2 2 73 0 0 1 1 0 0.57 1 4 0 0 4 4 4 7 5 5 32.18 0.4 99.38 0 1 2 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 5 40421616 56146235 1 4 73 0 0 1 0 3 0.39 0 2 0 0 NA NA NA 11 11 11 32.18 45.32 54.56 0 1 2 Whitelist PACA-AU 11 0.62 0 0 0 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 6 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 7 8950046 9131826 1 1 73 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 10 10 10 32.18 31.49 68.38 0 1 2 Whitelist PACA-AU 0.62 0 0 NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 8 29941348 39851348 1 2 73 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 7 4 4 32.18 14.52 85.47 0 2 1 Whitelist PACA-AU 0.68 1 NA 0 0.64 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 9 73035221 139560353 12 13 73 3 3 3 3 1 1 0 16 0 0 16 13 16 20 13 13 32.18 71.01 25.88 0 2 1 Whitelist PACA-AU 0.99 0 0 0 1 1 High confidence PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA Canonical without polyploidization 25 0.17 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 10 84507850 84778379 1 1 73 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 32.18 0.2 99.62 0 2 3 Whitelist PACA-AU 0.62 0.51 NA NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 11 58201114 127787341 1 12 73 1 1 0 0 10 0.57 0 10 0 0 10 10 10 12 12 12 32.18 48.56 51.01 0 1 2 Whitelist PACA-AU 0.68 0 0 0 0.64 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 14 0.1 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 12 84689185 84973961 1 1 73 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 32.18 0.21 99.7 0 1 2 Whitelist PACA-AU 0.62 0.51 NA NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 13 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 14 82219284 100582142 6 6 73 0 1 3 2 0 0.34 0 7 0 0 7 7 7 10 9 10 32.18 14 82.29 0 2 3 Whitelist PACA-AU 0.62 0.01 0 0 0.59 1 High confidence PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA Canonical without polyploidization 12 0.08 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 15 59232189 59461830 1 1 73 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 6 32.18 95.13 0 0 0 1 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 16 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 17 NA NA 0 0 73 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 18 6879033 49445913 1 4 73 2 0 0 1 1 0.3 0.13 5 0 0 5 3 5 6 4 4 32.18 55.88 44.08 0 1 0 Whitelist PACA-AU 0.54 0.32 0 0 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 19 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 20 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 21 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 22 20149627 46975707 4 4 73 2 2 0 0 0 0.26 0 16 0 0 16 16 16 17 17 17 32.18 93.52 6.48 0 1 2 Whitelist PACA-AU 0.62 0.01 0 0 0.59 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0067 X NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0067 PACA 0.32 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578388_T_C,CN:1 2 PACA-AU DO33032 ICGC_0067 male deceased C25.0 64 495 495 NA Included Panc-AdenoCA PACA AU 1 16.28 PACA-AU::ICGC_0069 1 154903017 243872557 1 4 73 0 2 0 1 1 0.3 0.83 5 0 0 5 4 5 10 4 4 38.07 47.01 52.99 0 2 3 Whitelist PACA-AU 0.68 0.97 0 0 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 7 0.05 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 2 143456514 199710963 1 2 73 0 1 0 1 0 0.57 0.29 1 0 0 NA NA NA NA NA NA 38.07 0 99.9 0 2 NA Whitelist PACA-AU 0.68 0.53 0 0 0.64 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 4 0.03 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 3 NA NA 0 0 73 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.48 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 4 18719980 92925978 1 3 73 1 1 0 0 1 0.57 0.49 2 NA 0 NA NA NA NA NA NA 38.07 23.28 76.7 0 1 2 Whitelist PACA-AU 0.62 0.73 NA 0 0.64 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 5 0.03 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 5 NA NA 0 0 73 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 6 146298596 146323450 1 1 73 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 38.07 21.16 78.7 0 2 NA Whitelist PACA-AU 0.62 0.58 NA NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 7 44105125 157291699 1 4 73 1 2 0 0 1 0.3 0.8 5 0 0 5 3 5 7 4 4 38.07 46.02 53.75 0 3 1 Whitelist PACA-AU 0.68 0.95 0 0 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 7 0.05 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 8 60467640 144025399 4 4 73 1 1 1 1 0 1 0.01 3 0 0 NA NA NA 4 4 4 38.07 53.8 42.78 0 2 1 Whitelist PACA-AU 1 0.05 0 0 1 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 8 0.05 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 9 9145681 22126811 1 2 73 1 0 1 0 0 0.57 0.54 1 0.11 0 NA NA NA 4 0 3 38.07 76.24 23.09 0 1 NA Whitelist PACA-AU 0.68 0.77 0.12 0 0.64 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 4 0.03 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 10 31753836 35640912 1 1 73 0 1 0 0 0 0.39 0.78 3 NA NA NA NA NA 5 3 3 38.07 4.61 92.04 0 3 4 Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 11 NA NA 0 0 73 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 12 NA NA 0 0 73 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 13 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 14 NA NA 0 0 73 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-AU NA 0.54 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 15 62553528 96290031 17 17 73 1 5 4 7 0 0.22 0 26 0 0 26 6 8 31 6 8 38.07 32.51 67.39 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA With other complex events 34 0.23 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 16 6733793 6746154 1 1 73 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 38.07 0.01 99.89 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 17 55281492 55292011 1 1 73 0 1 0 0 0 0.39 0.05 1 0 NA NA NA NA 4 4 4 38.07 75.36 18.88 0 1 NA Whitelist PACA-AU 0.62 0.16 0 NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 18 53839900 53870230 1 1 73 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 38.07 95.32 0.04 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 19 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 20 21770030 24123417 4 4 73 1 1 1 1 0 1 0.07 5 0 0 5 0 4 6 0 4 38.07 36.5 62.53 2 2 3 Whitelist PACA-AU 1 0.21 0 0 1 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 8 0.05 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 21 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 22 NA NA 0 0 73 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.44 NA NA NA 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 0 0 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0069 X 145167812 145182026 1 1 73 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.07 8.33 91.44 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0069 PACA 0.58 1.81 Panc-AdenoCA NA 2 0.01 NA 1 PACA-AU DO34264 ICGC_0069 female deceased C25.0 63 1144 1144 NA Included Panc-AdenoCA PACA AU 1 37.63 PACA-AU::ICGC_0075 1 174648681 179538886 2 2 52 0 0 1 1 0 0.57 0.3 1 0 0 NA NA NA 11 5 5 69.17 28.38 68.64 0 5 NA Whitelist PACA-AU 0.68 0.55 0 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 2 NA NA 0 0 52 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.32 NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 3 19274393 86897374 1 1 52 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 69.17 65.68 34.15 0 2 3 Whitelist PACA-AU 0.62 0.51 NA NA 0.59 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 4 183076943 183562276 6 6 52 2 2 1 1 0 0.88 0.16 3 0 0 NA NA NA NA NA NA 69.17 99.99 0 0 3 4 Whitelist PACA-AU 0.93 0.37 0 0 0.91 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 12 0.12 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 5 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 6 88778680 155804481 1 7 52 3 0 1 1 2 0.28 0.01 7 0 0 7 3 7 8 3 3 69.17 35.44 64.32 0 2 1 Whitelist PACA-AU 0.68 0.05 0 0 0.59 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 12 0.12 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 7 4282203 140497730 1 6 52 2 0 2 2 0 0.57 0.06 3 0 0 NA NA NA NA NA NA 69.17 98.82 0.95 0 4 2 Whitelist PACA-AU 0.68 0.18 0 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 12 0.12 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 8 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 9 21462130 108550434 1 2 52 1 1 0 0 0 0.57 1 6 NA 0 6 5 6 7 5 5 69.17 1.1 98.74 0 2 3 Whitelist PACA-AU 0.68 1 NA 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 10 5467560 5877928 2 2 52 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 69.17 0 99.82 0 2 NA Whitelist PACA-AU 0.68 1 NA 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 11 100944460 101464759 2 2 52 0 0 1 1 0 0.57 0.09 4 0 0 4 4 4 9 9 9 69.17 99 0.58 1 2 3 Whitelist PACA-AU 0.68 0.26 0 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 12 40501916 129909231 1 3 52 1 0 1 1 0 0.8 0.74 4 0 0 4 3 4 5 3 5 69.17 99.45 0.53 0 4 2 Whitelist PACA-AU 0.87 0.91 0 0 0.84 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 6 0.06 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 13 54766204 56753549 1 1 52 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 69.17 100 0 0 4 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 14 33944978 34014774 2 2 52 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 69.17 99.09 0 0 3 NA Whitelist PACA-AU 0.68 0.09 0 0 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 16 145933 89015792 1 2 52 1 0 0 1 0 0.57 0.65 5 NA 0.04 5 5 5 5 5 5 69.17 98.61 0.99 0 4 2 Whitelist PACA-AU 0.68 0.86 NA 0.04 0.64 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 4 0.04 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 17 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 19 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 21 34052304 34522527 1 1 52 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 69.17 77.35 0 0 1 3 Whitelist PACA-AU 0.62 0.72 NA NA 0.59 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 2 0.02 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0075 X 31413826 136240524 1 3 52 3 0 0 0 0 0.03 0.75 7 0 0 7 5 7 8 5 8 69.17 96.61 0 0 4 3 Whitelist PACA-AU 0.41 0.91 0 0 0.33 0 No PACA-AU ICGC_0075 PACA 0.67 3.13 Panc-AdenoCA NA 6 0.06 NA 4 PACA-AU DO33077 ICGC_0075 female deceased C25.0 76 476 476 NA Included Panc-AdenoCA PACA AU 1 15.66 PACA-AU::ICGC_0087 1 239822535 240902961 1 1 79 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 4 5 47.32 41.93 55.1 0 2 3 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 2 43419895 242287365 1 5 79 1 0 2 0 2 0.3 1 9 0 0 9 4 9 10 4 4 47.32 22.46 74.85 0 1 2 Whitelist PACA-AU 0.68 1 0 0 0.59 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 8 0.05 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 3 60412200 149059532 1 6 79 4 0 0 1 1 0.04 0.27 9 0 0 9 4 9 11 5 5 47.32 66.54 33.32 10 1 0 Whitelist PACA-AU 0.54 0.51 0 0 0.36 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 11 0.07 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 4 NA NA 0 0 79 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.39 NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 5 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 6 NA NA 0 0 79 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.48 NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 7 17124522 62387137 11 14 79 2 4 3 2 3 0.8 0 15 0 0 15 5 12 16 5 7 47.32 97.02 0 2 5 3 Whitelist PACA-AU 0.9 0 0 0 0.84 1 Low confidence PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA With other complex events 25 0.16 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 8 31654506 141397952 1 3 79 3 0 0 0 0 0.03 1 7 0 0 7 6 7 8 6 6 47.32 73.62 22.95 0 2 3 Whitelist PACA-AU 0.41 1 0 0 0.33 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 6 0.04 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 9 26323828 26628504 3 3 79 1 2 0 0 0 0.3 0 2 0 0 NA NA NA 13 7 7 47.32 96.76 0.13 0 3 4 Whitelist PACA-AU 0.62 0 0 0 0.59 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 6 0.04 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 10 60725577 84090610 6 7 79 2 0 2 2 1 0.57 0 9 0 0 9 7 9 22 12 12 47.32 29.22 70.6 0 3 2 Whitelist PACA-AU 0.96 0 0 0 0.64 1 High confidence PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA Canonical without polyploidization 13 0.08 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 11 31941512 32007200 1 1 79 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 47.32 99.57 0 0 3 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 12 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 13 NA NA 0 0 79 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 15 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 16 52802057 66891508 1 2 79 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 6 3 4 47.32 38.48 57 0 2 1 Whitelist PACA-AU 0.68 1 NA 0 0.64 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 4 0.03 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 17 57912676 57951570 1 1 79 0 0 0 1 0 0.39 1 2 NA NA NA NA NA 4 0 3 47.32 0.05 99.93 0 3 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 18 18629528 22549984 8 8 79 4 2 1 1 0 0.39 0 12 0 0 12 5 5 16 5 5 47.32 36.84 58.3 2 4 5 Whitelist PACA-AU 0.62 0 0 0 0.59 1 Low confidence PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA With other complex events 16 0.1 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 19 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 20 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0087 X NA NA 0 0 79 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.69 NA NA NA 1 No PACA-AU ICGC_0087 PACA 0.29 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33344 ICGC_0087 male deceased C25.0 70 361 361 NA Included Panc-AdenoCA PACA AU 1 11.88 PACA-AU::ICGC_0088 1 5961881 233582818 1 2 116 1 0 1 0 0 0.57 0.08 6 0.02 0.08 6 3 4 8 4 5 38.45 48.49 48.54 0 1 3 Whitelist PACA-AU 0.68 0.24 0.02 0.08 0.64 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 4 0.02 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 2 92033234 173224054 1 3 116 1 0 0 2 0 0.3 0.13 7 0 0 7 3 6 8 4 4 38.45 62.7 37.2 0 3 2 Whitelist PACA-AU 0.62 0.32 0 0 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 6 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 3 489240 5295564 2 6 116 1 0 0 1 4 0.57 0.1 8 0 0 8 8 8 16 13 13 38.45 59.1 37.73 0 1 2 Whitelist PACA-AU 21 0.62 0.26 0 0 0.64 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 8 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 4 91552749 178629613 1 4 116 4 0 0 0 0 0.01 0.45 8 0 0 8 8 8 9 9 9 38.45 2.51 97.48 0 1 2 Whitelist PACA-AU 0.21 0.7 0 0 0.16 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 8 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 5 13993067 14111497 1 1 116 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 38.45 25.47 71.87 0 3 4 Whitelist PACA-AU 0.62 0.05 NA NA 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 6 65546839 162828665 1 5 116 3 0 1 0 1 0.11 0.24 12 0 0 12 5 8 13 5 6 38.45 67.67 32.19 3 1 2 Whitelist PACA-AU 0.62 0.47 0 0 0.48 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 9 0.04 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 7 56161451 130577739 3 3 116 0 1 1 1 0 0.8 1 10 0 0 10 6 10 13 6 6 38.45 97.36 0 2 4 3 Whitelist PACA-AU 0.87 1 0 0 0.84 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 6 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 8 NA NA 0 0 116 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.54 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 9 29749027 29761640 1 1 116 0 0 1 0 0 0.39 0.33 2 NA NA NA NA NA 10 6 7 38.45 43.79 53.04 0 3 4 Whitelist PACA-AU 0.62 0.59 NA NA 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 10 83749018 83938726 1 1 116 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 38.45 0.14 99.68 0 1 2 Whitelist PACA-AU 0.62 0.4 NA NA 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 2 0.01 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 11 NA NA 0 0 116 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 12 21367968 34833918 9 9 116 3 2 2 2 0 0.95 0 13 0 0 13 9 13 19 10 10 38.45 22.09 77.83 2 3 2 Whitelist PACA-AU 0.97 0.02 0 0 0.97 1 High confidence PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA Canonical without polyploidization 18 0.08 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 13 NA NA 0 0 116 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.42 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 14 NA NA 0 0 116 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.52 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 16 78668494 84385982 1 3 116 2 1 0 0 0 0.3 0.13 8 0 0 8 4 6 10 4 7 38.45 95.35 0.11 1 2 3 Whitelist PACA-AU 0.62 0.33 0 0 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 6 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 17 51903784 59798070 3 4 116 2 1 0 0 1 0.3 0 4 0 0 4 3 4 18 4 6 38.45 4.71 95.24 3 6 2 Whitelist PACA-AU 0.68 0 0 0 0.59 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 7 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 18 27451678 30477084 11 11 116 3 3 3 2 0 0.97 0 17 0 0 17 17 17 22 18 18 38.45 64.1 35.86 0 1 2 Whitelist PACA-AU 0.98 0 0 0 0.98 1 High confidence PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA Canonical without polyploidization 22 0.09 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 19 NA NA 0 0 116 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.91 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 20 14780856 51045820 1 5 116 4 0 0 0 1 0.01 0.04 7 0 0 7 4 7 10 5 6 38.45 60.49 38.53 0 2 1 Whitelist PACA-AU 0.45 0.14 0 0 0.16 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 9 0.04 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 21 15597071 45349056 2 6 116 0 2 0 0 4 0.11 0 8 0 0 8 8 8 11 11 11 38.45 36.39 40.96 0 1 2 Whitelist PACA-AU 3 0.93 0.02 0 0 0.48 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 8 0.03 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 22 NA NA 0 0 116 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.65 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0088 X NA NA 0 0 116 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.33 NA NA NA 1 No PACA-AU ICGC_0088 PACA 0.51 2.33 Panc-AdenoCA NA 0 0 stopgain,17_7577573_T_G,CN:2 2 PACA-AU DO33288 ICGC_0088 male alive C25.0 71 1408 1408 NA Included Panc-AdenoCA PACA AU 1 46.32 PACA-AU::ICGC_0099 1 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 2 55698894 56030190 1 1 47 0 1 0 0 0 0.39 0.8 2 0 NA NA NA NA 7 3 5 29.41 27.48 72.41 0 3 5 Whitelist PACA-AU 0.62 0.95 0 NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 3 NA NA 0 0 47 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.5 NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 4 170710182 185972853 2 2 47 0 0 1 1 0 0.57 0.24 1 0 0 NA NA NA NA NA NA 29.41 19.19 80.61 0 1 NA Whitelist PACA-AU 0.68 0.48 0 0 0.64 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 5 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 6 NA NA 0 0 47 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 7 16182340 16426695 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.41 0.15 99.62 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 8 37747132 42741995 1 3 47 0 1 0 1 1 0.57 0 6 0 0 6 0 3 9 0 0 29.41 29.2 70.8 1 1 2 Whitelist PACA-AU 0.62 0.01 0 0 0.64 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 5 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 9 93487148 118968342 4 4 47 1 1 1 1 0 1 0 1 0 0 NA NA NA 13 4 5 29.41 30.82 68.47 0 2 NA Whitelist PACA-AU 1 0 0 0 1 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 8 0.09 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 10 130522137 133620128 3 3 47 0 1 2 0 0 0.3 0.17 2 0 0 NA NA NA 4 4 4 29.41 28.85 67.8 0 1 2 Whitelist PACA-AU 0.62 0.38 0 0 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 11 NA NA 0 0 47 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 12 24165589 24180849 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 29.41 51.66 44.59 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 13 94395992 94443896 1 1 47 0 1 0 0 0 0.39 0.68 2 NA NA NA NA NA NA NA NA 29.41 0.04 99.96 0 2 3 Whitelist PACA-AU 0.62 0.88 NA NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 14 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 15 NA NA 0 0 47 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 17 32526416 32658794 1 1 47 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 29.41 27.49 68.06 0 2 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 18 20254954 39230697 1 3 47 0 1 1 0 1 0.57 0.01 5 0 0 5 4 5 7 4 4 29.41 94.76 0 4 1 3 Whitelist PACA-AU 0.87 0.04 0 0 0.64 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 5 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 19 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 20 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0099 X 38482829 38787680 1 1 47 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 29.41 13.9 82.72 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0099 PACA 0.34 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 1 PACA-AU DO33168 ICGC_0099 female deceased C25.0 80 8 8 NA Included Panc-AdenoCA PACA AU 1 0.26 PACA-AU::ICGC_0103 1 60732047 60918979 2 2 28 0 0 1 1 0 0.57 0.28 1 0 0 NA NA NA NA NA NA 70.85 100 0 0 1 NA Whitelist PACA-AU 0.68 0.52 0 0 0.64 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 2 NA NA 0 0 28 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 3 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 5 80036995 104047562 2 2 28 0 0 1 1 0 0.57 0.26 4 NA 0 4 4 4 8 5 5 70.85 69.47 27.85 0 1 2 Whitelist PACA-AU 0.68 0.5 NA 0 0.64 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 6 170062014 170128205 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 70.85 0.04 99.82 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 7 146394681 146431691 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 4 70.85 97.29 0 0 3 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 9 19507832 22933746 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 70.85 2.43 97.47 0 0 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 10 84164092 84177540 1 1 28 0 0 1 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 70.85 99.82 0 0 4 NA Whitelist PACA-AU 0.62 0.62 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 13 20741975 20956570 7 8 28 3 2 1 1 1 0.67 0 8 0 0 8 6 7 9 6 6 70.85 99.82 0.18 0 1 2 Whitelist PACA-AU 0.68 0 0 0 0.74 0 Low confidence PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA Canonical without polyploidization 15 0.27 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 14 NA NA 0 0 28 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 15 45556792 45819525 1 1 28 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA 5 3 3 70.85 95.09 0 0 4 6 Whitelist PACA-AU 0.62 0.77 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 18 20375685 48671496 1 3 28 1 0 0 1 1 0.57 0 5 0 0 5 3 4 6 3 3 70.85 28.75 71.22 0 2 0 Whitelist PACA-AU 0.87 0.01 0 0 0.64 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 5 0.09 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0103 X 113818592 115262075 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 70.85 0.93 98.85 0 0 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0103 PACA 0.32 3.16 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578461_A_C,CN:2 3 PACA-AU DO33160 ICGC_0103 female deceased C25.0 78 1091 1091 NA Included Panc-AdenoCA PACA AU 1 35.89 PACA-AU::ICGC_0105 1 243128590 243164481 1 1 35 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 20.47 0 100 0 2 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 2 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 3 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 4 156052807 159900185 1 3 35 1 0 1 0 1 0.57 0.51 5 NA 0 5 5 5 6 6 6 20.47 16.97 83.02 0 1 2 Whitelist PACA-AU 0.87 0.75 NA 0 0.64 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 5 0.07 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 6 33475847 67428267 1 1 35 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 4 20.47 99.8 0.06 0 1 3 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 7 16695255 42016462 1 2 35 0 2 0 0 0 0.11 0.71 2 NA 0 NA NA NA NA NA NA 20.47 0.5 99.28 0 2 3 Whitelist PACA-AU 0.54 0.9 NA 0 0.48 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 4 0.06 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 8 13166371 33613106 1 4 35 2 1 0 0 1 0.3 0.01 10 0 0 10 7 10 13 7 7 20.47 12.57 87.2 0 2 1 Whitelist PACA-AU 0.68 0.04 0 0 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 7 0.1 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 9 21355797 22948589 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 20.47 1.13 98.2 2 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 10 89717198 89766746 1 1 35 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 20.47 0 99.82 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 13 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 14 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 15 20858307 27534288 2 5 35 1 1 0 0 3 0.57 0 5 0 0 5 5 5 7 6 6 20.47 49.49 50.41 0 1 2 Whitelist PACA-AU 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 7 0.1 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 18 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.83 NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 19 3429704 7509066 1 3 35 0 0 1 1 1 0.57 0 5 0 0 5 0 3 8 3 3 20.47 13.88 85.94 0 1 2 Whitelist PACA-AU 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 5 0.07 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 20 20670282 25591462 4 6 35 0 1 1 2 2 0.57 0 2 0 0 NA NA NA 4 3 4 20.47 40.49 52.33 0 1 3 Whitelist PACA-AU 15 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 10 0.14 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 22 21171285 42856468 1 2 35 1 1 0 0 0 0.57 0.06 2 NA 0 NA NA NA NA NA NA 20.47 57.73 42.27 0 1 2 Whitelist PACA-AU 0.68 0.2 NA 0 0.64 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 4 0.06 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0105 X 74469979 74712722 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 20.47 100 0 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0105 PACA 0.75 1.82 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33152 ICGC_0105 male deceased C25.0 88 430 430 NA Included Panc-AdenoCA PACA AU 1 14.14 PACA-AU::ICGC_0108 1 49697342 115816372 1 6 130 1 0 1 0 4 0.57 0.41 2 0 0 NA NA NA NA NA NA 71.72 87.28 12.72 0 3 4 Whitelist PACA-AU 0.68 0.66 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 8 0.03 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 2 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 3 140973926 141251591 1 1 130 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 71.72 96.92 0 0 4 5 Whitelist PACA-AU 0.62 0.01 NA NA 0.59 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 4 39324871 161001399 1 8 130 2 2 1 0 3 0.53 0.6 13 0 0 13 8 13 15 8 8 71.72 19.73 80.25 1 2 3 Whitelist PACA-AU 0.62 0.81 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 13 0.05 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 5 17333819 167834910 1 2 130 0 2 0 0 0 0.11 0.07 5 NA 0 5 4 5 7 4 4 71.72 97.31 0 0 3 4 Whitelist PACA-AU 0.54 0.2 NA 0 0.48 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 6 NA NA 0 0 130 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.1 NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 7 2398212 48791277 11 12 130 1 1 4 5 1 0.2 0.01 8 0 0 8 8 8 9 9 9 71.72 99.78 0 0 3 4 Whitelist PACA-AU 0.62 0.03 0 0 0.59 1 High confidence PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA After polyploidization 23 0.09 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 8 130458967 136042241 1 11 130 1 0 0 0 10 0.39 0.01 3 0 0 NA NA NA 6 3 3 71.72 54.28 45.72 2 4 3 Whitelist PACA-AU 16 0.87 0.04 0 0 0.59 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 12 0.05 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 9 24123027 34620820 1 2 130 1 1 0 0 0 0.57 0.25 3 NA 0 NA NA NA 4 4 4 71.72 99.3 0 0 4 3 Whitelist PACA-AU 0.68 0.49 NA 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 10 64271788 78487134 4 12 130 1 2 0 1 8 0.57 0 15 0 0 15 5 5 17 5 5 71.72 99.82 0 0 3 4 Whitelist PACA-AU 0.62 0 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 16 0.06 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 11 65145827 77426201 2 4 130 2 2 0 0 0 0.26 0.67 9 0 0 9 4 9 14 7 7 71.72 48.2 47.95 0 4 6 Whitelist PACA-AU 0.62 0.88 0 0 0.59 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 8 0.03 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 12 87325269 88310672 1 1 130 0 0 1 0 0 0.39 0.29 2 NA NA NA NA NA 5 3 3 71.72 95.52 0.74 0 2 3 Whitelist PACA-AU 0.62 0.54 NA NA 0.59 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 13 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 14 NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 15 72837742 76978145 1 2 130 0 0 1 1 0 0.57 0.59 2 NA 0 NA NA NA 6 3 4 71.72 51.41 43.68 0 2 4 Whitelist PACA-AU 0.68 0.81 NA 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 16 7156182 56853192 1 13 130 0 1 0 1 11 0.57 0 11 0 0 11 7 9 16 9 11 71.72 25.54 74.36 1 2 3 Whitelist PACA-AU 0.8 0 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 15 0.06 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 17 NA NA 0 0 130 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 18 714362 22495024 1 13 130 0 1 1 0 11 0.57 0 12 0 0 12 3 4 17 3 3 71.72 89.24 5.64 4 13 6 Whitelist PACA-AU 10_20 0.62 0 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 15 0.06 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 19 793019 40693235 14 21 130 2 2 5 5 7 0.46 0 34 0 0 34 4 4 39 4 4 71.72 56.77 42.99 14 4 2 Whitelist PACA-AU 0.68 0 0 0 0.64 1 Low confidence PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA With other complex events 35 0.13 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 20 25123800 59639370 4 5 130 2 1 0 1 1 0.57 0 11 0 0 11 11 11 15 12 12 71.72 59.28 33.68 3 4 3 Whitelist PACA-AU 0.93 0 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 9 0.03 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 21 19305957 24127573 3 5 130 0 1 1 1 2 0.8 0 8 0 0 8 3 4 12 3 4 71.72 70.29 7.06 0 5 4 Whitelist PACA-AU 0.68 0 0 0 0.84 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 8 0.03 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 22 22658161 32392439 1 2 130 1 1 0 0 0 0.57 0 4 0 0 4 3 4 9 4 4 71.72 64.76 35.24 0 4 2 Whitelist PACA-AU 0.68 0.03 0 0 0.64 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 4 0.02 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0108 X NA NA 0 0 130 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0108 PACA 0.31 3.02 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 PACA-AU DO33128 ICGC_0108 male deceased C25.0 72 423 423 NA Included Panc-AdenoCA PACA AU 1 13.91 PACA-AU::ICGC_0109 1 16933989 234569465 1 3 30 1 0 1 0 1 0.57 0.51 2 NA 0.02 NA NA NA NA NA NA 25.1 100 0 0 1 4 Whitelist PACA-AU 0.87 0.75 NA 0.02 0.64 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 5 0.08 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 2 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 3 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 4 62740524 128349194 1 1 30 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 25.1 34.32 65.66 0 1 2 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 5 55531264 177528041 14 16 30 5 4 2 3 2 0.7 0 22 0 0 22 22 22 23 23 23 25.1 12.26 87.6 0 1 2 Whitelist PACA-AU 0.87 0 0 0 0.78 1 High confidence PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA Canonical without polyploidization 30 0.5 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 6 45098361 56536167 1 2 30 0 2 0 0 0 0.11 0.7 1 NA 0 NA NA NA NA NA NA 25.1 0 99.85 0 2 NA Whitelist PACA-AU 0.54 0.9 NA 0 0.48 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 4 0.07 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 9 22190369 22222673 1 1 30 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 5 5 5 25.1 48.18 51.15 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 11 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 12 44591323 96585529 1 3 30 0 1 1 1 0 0.8 0.16 1 0 0 NA NA NA NA NA NA 25.1 0 99.92 0 2 NA Whitelist PACA-AU 0.87 0.37 0 0 0.84 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 6 0.1 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 13 37058794 42728203 2 2 30 2 0 0 0 0 0.11 0.08 1 0 0 NA NA NA NA NA NA 25.1 100 0 0 3 NA Whitelist PACA-AU 0.54 0.24 0 0 0.48 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 4 0.07 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 18 NA NA 0 0 30 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.78 NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 21 NA NA 0 0 30 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.17 NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0109 X 69994754 70012094 1 1 30 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.1 100 0 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0109 PACA 0.48 1.96 Panc-AdenoCA NA 2 0.03 NA 2 PACA-AU DO33184 ICGC_0109 male deceased C25.0 70 913 913 NA Included Panc-AdenoCA PACA AU 1 30.03 PACA-AU::ICGC_0114 1 32132328 65796925 25 26 195 9 8 5 3 1 0.3 0 43 0 0 43 7 7 56 7 7 60.31 41.34 58.49 0 7 2 Whitelist PACA-AU 0.68 0 0 0 0.59 1 High confidence PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA With other complex events 51 0.13 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 2 28274298 38935751 12 13 195 0 3 4 5 1 0.2 0.05 11 0 0 11 11 11 21 13 19 60.31 91.35 8.56 8 1 2 Whitelist PACA-AU 0.68 0.17 0 0 0.59 1 High confidence PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA Canonical without polyploidization 25 0.06 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 3 16540034 36540045 9 10 195 1 3 2 3 1 0.75 0.16 11 0 0 11 3 4 20 7 9 60.31 80.56 16.15 0 2 4 Whitelist PACA-AU 0.68 0.36 0 0 0.83 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 4 53628937 134598205 1 4 195 2 0 0 0 2 0.11 0.02 8 0 0 8 4 4 8 4 4 60.31 3.08 96.81 3 2 3 Whitelist PACA-AU 0.62 0.08 0 0 0.48 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 5 2336526 148646323 1 4 195 3 0 0 0 1 0.03 0.01 4 0.02 0 4 4 4 5 5 5 60.31 5.12 94.75 1 1 2 Whitelist PACA-AU 0.54 0.05 0.02 0 0.33 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 6 92940256 139746601 33 36 195 7 7 9 10 3 0.85 0 66 0 0 66 6 14 72 6 15 60.31 99.55 0.31 32 7 3 Whitelist PACA-AU 0.93 0 0 0 0.89 1 Low confidence PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA With other complex events 69 0.18 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 7 51973552 124530562 2 2 195 1 0 1 0 0 0.57 1 3 0 0 NA NA NA 8 3 3 60.31 13.16 86.62 0 2 4 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 8 52394421 97953334 2 2 195 0 0 1 1 0 0.57 0.14 4 0 0 4 0 3 8 4 4 60.31 99.99 0 2 3 4 Whitelist PACA-AU 0.68 0.33 0 0 0.64 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 9 21770889 26644332 1 1 195 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 60.31 3.47 95.83 0 0 2 Whitelist PACA-AU 0.62 0.04 NA NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 10 72984995 103221106 7 7 195 2 3 1 1 0 0.67 0.3 7 0 0 7 7 7 13 7 7 60.31 21.18 78.64 0 2 1 Whitelist PACA-AU 0.77 0.55 0 0 0.74 1 High confidence PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA Canonical without polyploidization 14 0.04 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 11 2587295 90887987 1 3 195 1 1 1 0 0 0.8 0.23 8 0 0 8 6 8 9 7 7 60.31 99.44 0 0 4 3 Whitelist PACA-AU 0.87 0.46 0 0 0.84 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 12 131707562 133205562 1 1 195 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 60.31 99.43 0 0 3 NA Whitelist PACA-AU 0.62 0.01 NA NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 13 37543910 87424379 3 3 195 1 1 1 0 0 0.8 0.23 10 0 0 10 4 7 15 5 6 60.31 99.78 0.22 0 4 2 Whitelist PACA-AU 0.87 0.47 0 0 0.84 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 14 78475813 103289944 1 4 195 0 0 1 1 2 0.57 0.14 1 0 0 NA NA NA 5 5 5 60.31 99.09 0 0 3 NA Whitelist PACA-AU 1 0.34 0 0 0.64 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 15 55410445 56090864 1 1 195 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 60.31 99.89 0 0 1 3 Whitelist PACA-AU 0.62 0.16 NA NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 16 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 17 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 18 30777775 32678968 3 4 195 1 0 1 1 1 0.8 0.26 2 0 0 NA NA NA 6 5 5 60.31 99.96 0 0 1 3 Whitelist PACA-AU 0.68 0.5 0 0 0.84 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 19 53800624 53952527 1 1 195 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 60.31 99.57 0 0 3 NA Whitelist PACA-AU 0.62 0.42 NA NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 20 32702411 33084671 1 1 195 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 0 0 60.31 93 0 0 1 3 Whitelist PACA-AU 0.62 0.33 NA NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 21 27194698 27630717 1 1 195 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 60.31 49.71 20.95 0 3 NA Whitelist PACA-AU 0.62 0.05 0 NA 0.59 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 22 NA NA 0 0 195 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0114 X NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0114 PACA 0.68 2.73 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577535_A_C,CN:2 4 PACA-AU DO33512 ICGC_0114 female deceased C25.0 NA 499 499 NA Included Panc-AdenoCA PACA AU 1 16.41 PACA-AU::ICGC_0115 1 879208 73662531 1 6 104 4 0 0 0 2 0.01 0.86 10 0 0 10 6 10 11 6 6 79.39 96.96 0 0 3 1 Whitelist PACA-AU 0.25 0.99 0 0 0.16 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 10 0.05 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 2 235599848 235777113 1 1 104 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 5 79.39 99.61 0.3 0 1 3 Whitelist PACA-AU 0.62 0.16 NA NA 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 3 45741712 188370800 1 7 104 5 0 1 1 0 0.04 1 14 0 0 14 5 8 15 5 9 79.39 98.89 1.07 0 3 2 Whitelist PACA-AU 0.47 1 0 0 0.38 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 14 0.07 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 4 152917753 185780456 5 5 104 3 2 0 0 0 0.14 0.43 8 0 0 8 3 5 17 9 9 79.39 98.78 1.13 7 3 2 Whitelist PACA-AU 0.62 0.68 0 0 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 10 0.05 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 5 86927199 121588106 1 4 104 2 0 0 0 2 0.11 1 7 0 0 7 3 5 8 3 5 79.39 99.63 0.25 9 4 2 Whitelist PACA-AU 1 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 6 0.03 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 6 5755435 163211524 1 7 104 7 0 0 0 0 0 0.68 10 0.01 0 10 5 10 11 5 11 79.39 99.06 0.8 0 3 1 Whitelist PACA-AU 0.02 0.88 0.01 0 0.01 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 14 0.07 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 7 131316427 136575603 2 4 104 0 0 2 2 0 0.26 0.13 4 0 0 4 4 4 11 9 9 79.39 97.71 2.06 3 2 4 Whitelist PACA-AU 0.62 0.32 0 0 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 8 0.04 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 8 138862996 144845768 2 2 104 1 1 0 0 0 0.57 0.5 3 0 0 NA NA NA 5 4 5 79.39 67.14 29.36 6 4 2 Whitelist PACA-AU 0.68 0.74 0 0 0.64 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 9 2616966 81422197 1 2 104 2 0 0 0 0 0.11 0.45 4 NA 0.04 4 4 4 5 5 5 79.39 0.83 98.46 0 0 2 Whitelist PACA-AU 0.54 0.69 NA 0.04 0.48 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 10 84096977 84345082 1 1 104 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 79.39 99.82 0 0 4 NA Whitelist PACA-AU 0.62 0.26 NA NA 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 11 90410560 129194171 1 3 104 3 0 0 0 0 0.03 0.64 6 0 0 6 6 6 7 7 7 79.39 96.58 2.99 0 2 4 Whitelist PACA-AU 0.41 0.85 0 0 0.33 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 6 0.03 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 12 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 13 70447541 94108659 6 6 104 0 0 3 3 0 0.11 0.09 14 0 0 14 10 10 15 11 11 79.39 100 0 1 5 3 Whitelist PACA-AU 0.54 0.26 0 0 0.48 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 12 0.06 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 14 33169997 87973514 1 2 104 2 0 0 0 0 0.11 0.78 4 NA 0 4 4 4 5 5 5 79.39 0.13 98.96 0 0 2 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 15 37973417 38008777 1 1 104 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 79.39 99.87 0 0 4 NA Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 16 3802028 23118217 13 13 104 3 3 2 5 0 0.69 0 26 0 0 26 4 5 32 4 5 79.39 95.81 4.09 0 6 1 Whitelist PACA-AU 0.8 0 0 0 0.77 0 Low confidence PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA With other complex events 26 0.12 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 17 54113474 76762660 1 1 104 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA 4 4 4 79.39 40.33 55.22 0 2 4 Whitelist PACA-AU 0.62 0.77 NA NA 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 18 48482372 73754548 1 5 104 2 0 1 0 2 0.3 0.02 11 0 0 11 5 5 12 5 5 79.39 0.67 99.31 0 2 0 Whitelist PACA-AU 0.93 0.09 0 0 0.59 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 8 0.04 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 19 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 20 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 21 NA NA 0 0 104 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 22 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0115 X 94245698 150684659 1 5 104 5 0 0 0 0 0 0.65 12 0 0 12 8 11 14 8 10 79.39 81.07 15.55 5 2 3 Whitelist PACA-AU 0.1 0.86 0 0 0.07 0 No PACA-AU ICGC_0115 PACA 0.39 3.3 Panc-AdenoCA NA 10 0.05 frameshift_insertion,17_7578474_G_-,CN:2 3 PACA-AU DO33248 ICGC_0115 female deceased C25.0 70 796 796 NA Included Panc-AdenoCA PACA AU 1 26.18 PACA-AU::ICGC_0124 1 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 2 NA NA 0 0 57 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.25 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 3 187818885 187960672 1 1 57 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 10 7 8 62.49 32.46 64.16 0 4 6 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 4 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 5 2377291 16056854 1 2 57 1 0 1 0 0 0.57 0.03 8 0 0 8 4 4 13 6 6 62.49 97.32 0 0 3 5 Whitelist PACA-AU 0.68 0.1 0 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 6 65488657 163268061 1 2 57 2 0 0 0 0 0.11 0.58 4 NA 0 4 4 4 6 6 6 62.49 99.85 0 0 3 4 Whitelist PACA-AU 0.54 0.81 NA 0 0.48 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 7 38240865 38293732 1 1 57 0 1 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 5 5 62.49 97.28 0 0 4 5 Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 8 38480322 42477999 1 3 57 1 1 0 0 1 0.57 0.77 4 NA 0 4 3 4 4 3 3 62.49 68.22 27.93 0 4 2 Whitelist PACA-AU 0.62 0.93 NA 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 5 0.04 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 9 8827816 9413777 1 2 57 1 1 0 0 0 0.57 0.49 4 0.25 0 4 3 4 5 3 3 62.49 0.31 98.96 0 2 0 Whitelist PACA-AU 0.68 0.73 0.25 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 10 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 11 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 12 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 13 22769158 30632089 1 1 57 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA 7 4 5 62.49 100 0 0 4 8 Whitelist PACA-AU 0.62 0.15 0 NA 0.59 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 14 20629775 85276465 1 3 57 0 0 1 1 1 0.57 0.1 4 0 0 4 3 4 5 3 3 62.49 79.87 19.22 0 3 1 Whitelist PACA-AU 0.62 0.27 0 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 5 0.04 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 16 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.87 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 17 19412015 58057820 1 4 57 2 1 0 1 0 0.57 0.02 12 0 0 12 3 6 14 3 6 62.49 73.06 22.47 4 3 4 Whitelist PACA-AU 0.68 0.08 0 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 8 0.07 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 18 48599644 77940590 1 2 57 1 0 0 0 1 0.39 0 3 0 NA NA NA NA 10 3 3 62.49 32.38 62.9 0 0 2 Whitelist PACA-AU 0.68 0 0 NA 0.59 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 3 0.03 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 19 16084162 41809893 3 4 57 0 2 0 1 1 0.3 0 8 0 0 8 3 6 16 3 4 62.49 72.86 26.7 0 6 5 Whitelist PACA-AU 0.54 0 0 0 0.59 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 7 0.06 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 20 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 21 NA NA 0 0 57 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.12 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 22 NA NA 0 0 57 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.74 NA NA NA 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0124 X 30612416 44609347 2 4 57 0 0 1 1 2 0.57 0.02 6 0 0 6 6 6 8 8 8 62.49 26.2 73.8 0 1 2 Whitelist PACA-AU 0.62 0.09 0 0 0.64 0 No PACA-AU ICGC_0124 PACA 0.36 2.99 Panc-AdenoCA NA 6 0.05 NA 2 PACA-AU DO49078 ICGC_0124 male deceased C25.0 79 465 465 NA Included Panc-AdenoCA PACA AU 1 15.3 PACA-AU::ICGC_0134 1 164240322 188702487 1 2 142 1 1 0 0 0 0.57 0.01 3 0 0 NA NA NA 9 6 6 52.58 42.87 54.16 0 4 3 Whitelist PACA-AU 0.68 0.04 0 0 0.64 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 2 83071680 174286320 1 4 142 1 2 0 0 1 0.3 0.65 13 0 0 13 6 10 17 6 6 52.58 97.31 0 0 3 4 Whitelist PACA-AU 0.62 0.86 0 0 0.59 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 7 0.02 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 3 64943 171341239 1 6 142 4 2 0 0 0 0.06 0.62 13 0 0 13 6 13 14 6 6 52.58 48.52 51.36 0 2 3 Whitelist PACA-AU 0.54 0.84 0 0 0.48 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 12 0.04 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 4 83985247 84077987 1 1 142 0 1 0 0 0 0.39 0.61 2 0 NA NA NA NA 10 4 5 52.58 32.36 67.55 0 2 3 Whitelist PACA-AU 0.62 0.83 0 NA 0.59 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 5 16171904 148266539 1 5 142 2 2 0 0 1 0.26 0.22 12 0 0 12 7 12 13 7 7 52.58 84.96 12.38 0 3 2 Whitelist PACA-AU 0.62 0.46 0 0 0.59 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 9 0.03 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 6 101790038 162417439 1 4 142 3 1 0 0 0 0.11 0.15 7 0 0 7 3 7 10 4 4 52.58 34.01 63.15 0 2 1 Whitelist PACA-AU 0.54 0.36 0 0 0.48 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 8 0.03 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 7 2943890 129714150 1 7 142 5 2 0 0 0 0.02 0.57 17 0 0 17 9 9 18 9 9 52.58 36.63 60.82 0 2 1 Whitelist PACA-AU 0.41 0.8 0 0 0.33 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 14 0.05 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 8 282338 124452709 1 6 142 1 2 1 1 1 0.9 1 8 0 0 8 4 5 11 4 6 52.58 99.76 0.15 0 3 4 Whitelist PACA-AU 0.93 1 0 0 0.92 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 11 0.04 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 9 28591643 83053968 1 2 142 2 0 0 0 0 0.11 0.19 4 NA 0 4 4 4 5 5 5 52.58 99.74 0.09 0 2 3 Whitelist PACA-AU 0.54 0.41 NA 0 0.48 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 10 43852255 62305485 1 2 142 2 0 0 0 0 0.11 1 5 0 0 5 3 5 11 3 3 52.58 56.48 40.18 0 4 5 Whitelist PACA-AU 0.54 1 0 0 0.48 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 11 814940 117163907 1 6 142 6 0 0 0 0 0 0.55 12 0 0 12 4 6 13 4 4 52.58 38.72 57.52 0 2 3 Whitelist PACA-AU 0.04 0.77 0 0 0.03 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 12 0.04 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 12 32744378 50396857 1 2 142 1 1 0 0 0 0.57 0.69 4 0 0 4 3 4 9 5 5 52.58 0.38 99.53 0 2 1 Whitelist PACA-AU 0.68 0.89 0 0 0.64 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 13 50645248 50916091 1 1 142 1 0 0 0 0 0.39 0.64 2 0 NA NA NA NA NA NA NA 52.58 0.24 99.76 0 1 2 Whitelist PACA-AU 0.62 0.85 0 NA 0.59 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 14 65138554 75720768 1 3 142 0 3 0 0 0 0.03 0.81 4 0 0 4 4 4 5 5 5 52.58 99.09 0 0 3 4 Whitelist PACA-AU 0.41 0.95 0 0 0.33 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 6 0.02 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 15 NA NA 0 0 142 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 16 78329402 79201800 1 2 142 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 6 6 52.58 19.03 80.88 0 2 3 Whitelist PACA-AU 0.54 1 NA 0 0.48 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 17 9970720 36998361 1 2 142 0 1 1 0 0 0.57 0.6 5 NA 0 5 3 5 6 3 3 52.58 68.36 27.2 0 3 1 Whitelist PACA-AU 0.68 0.81 NA 0 0.64 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 18 22112675 27669004 2 2 142 1 1 0 0 0 0.57 0.06 4 0 0 4 3 4 13 4 4 52.58 95.35 0 0 8 7 Whitelist PACA-AU 0.68 0.18 0 0 0.64 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 19 27781138 30186859 5 8 142 2 0 1 2 3 0.53 0 8 0 0 8 0 4 39 7 9 52.58 30.19 62.53 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.64 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 13 0.05 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 20 6669346 36472784 1 5 142 4 1 0 0 0 0.04 0.24 9 0 0 9 9 9 9 9 9 52.58 92.97 0 0 4 3 Whitelist PACA-AU 0.45 0.48 0 0 0.36 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 10 0.04 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 21 16587945 16602651 1 1 142 0 0 0 1 0 0.39 0.69 2 NA NA NA NA NA 8 3 4 52.58 13.08 64.27 0 5 6 Whitelist PACA-AU 0.62 0.89 NA NA 0.59 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 22 18019664 28052500 12 12 142 3 1 4 4 0 0.57 0 18 0 0 18 8 18 25 8 8 52.58 44.08 44.81 1 4 5 Whitelist PACA-AU 0.68 0 0 0 0.64 1 High confidence PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA With other complex events 24 0.08 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0134 X 1963011 121078752 1 7 142 6 1 0 0 0 0 0.7 3 0 0 NA NA NA NA NA NA 52.58 0.02 99.98 0 2 3 Whitelist PACA-AU 0.13 0.9 0 0 0.09 1 No PACA-AU ICGC_0134 PACA 0.31 2.71 Panc-AdenoCA NA 14 0.05 frameshift_deletion,17_7576872_-_C,CN:2 2 PACA-AU DO33368 ICGC_0134 male deceased C25.0 81 98 98 NA Included Panc-AdenoCA PACA AU 1 3.22 PACA-AU::ICGC_0135 1 154771759 155452521 1 1 78 0 1 0 0 0 0.39 0.53 2 0 NA NA NA NA 7 3 4 26.19 9.94 90.06 0 3 4 Whitelist PACA-AU 0.62 0.76 0 NA 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 2 233207909 233706434 3 3 78 0 1 1 1 0 0.8 0.41 3 0 0 NA NA NA 5 3 3 26.19 0.18 99.73 0 2 5 Whitelist PACA-AU 0.87 0.66 0 0 0.84 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 6 0.04 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 3 16830216 94316415 4 4 78 1 2 1 0 0 0.57 0.02 4 0 0 4 4 4 9 6 6 26.19 71.67 25.06 0 1 2 Whitelist PACA-AU 0.68 0.09 0 0 0.64 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 8 0.05 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 4 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 5 18461437 18491132 1 1 78 1 0 0 0 0 0.39 0.82 1 0.05 NA NA NA NA NA NA NA 26.19 0.35 99.52 0 2 NA Whitelist PACA-AU 0.62 0.96 0.05 NA 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 6 55017197 55241664 1 1 78 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 8 4 4 26.19 63.53 33.43 0 2 3 Whitelist PACA-AU 0.62 0.84 NA NA 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 7 26142187 72936673 1 2 78 1 1 0 0 0 0.57 0.45 2 NA 0 NA NA NA NA NA NA 26.19 0.08 99.7 0 1 2 Whitelist PACA-AU 0.68 0.69 NA 0 0.64 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 4 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 8 13910932 99892937 1 7 78 1 1 2 3 0 0.67 0 13 0 0 13 4 4 14 4 4 26.19 11.58 84.99 4 2 3 Whitelist PACA-AU 0.77 0 0 0 0.74 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 14 0.09 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 9 32236656 33592168 1 3 78 0 1 0 0 2 0.39 0.55 3 NA 0 NA NA NA 5 5 5 26.19 98.33 0.97 0 1 2 Whitelist PACA-AU 0.87 0.78 NA 0 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 4 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 10 NA NA 0 0 78 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.39 0 NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 11 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 12 69671748 121470643 1 4 78 0 4 0 0 0 0.01 0.79 8 0 0 8 7 8 11 7 7 26.19 0.7 99.22 0 2 3 Whitelist PACA-AU 0.21 0.94 0 0 0.16 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 8 0.05 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 13 32542222 33846725 1 2 78 1 1 0 0 0 0.57 0.35 4 0 0 4 3 4 7 5 5 26.19 0.5 99.5 0 2 1 Whitelist PACA-AU 0.68 0.6 0 0 0.64 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 4 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 14 102455783 106159978 1 2 78 1 1 0 0 0 0.57 0.31 1 0 0 NA NA NA NA NA NA 26.19 0 99.09 0 2 NA Whitelist PACA-AU 0.68 0.56 0 0 0.64 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 4 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 15 87592659 96320765 3 3 78 0 1 1 1 0 0.8 0 8 0 0 8 8 8 15 14 15 26.19 53.06 42.03 0 2 3 Whitelist PACA-AU 0.87 0 0 0 0.84 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 6 0.04 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 16 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 17 49156607 49480872 1 1 78 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 26.19 27.73 67.83 0 2 3 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 18 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 19 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 20 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 21 46873292 47251388 1 1 78 0 1 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 26.19 0.79 74.74 0 3 NA Whitelist PACA-AU 0.62 0.83 NA NA 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 22 30905086 42642455 1 2 78 0 2 0 0 0 0.11 0.24 2 NA 0 NA NA NA NA NA NA 26.19 0.58 99.42 0 2 3 Whitelist PACA-AU 0.54 0.47 NA 0 0.48 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 4 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0135 X 126008369 140884078 2 4 78 0 0 2 2 0 0.26 0.02 4 0 0 4 4 4 15 15 15 26.19 1.77 98 0 1 2 Whitelist PACA-AU 0.62 0.07 0 0 0.59 0 No PACA-AU ICGC_0135 PACA 0.32 1.87 Panc-AdenoCA NA 8 0.05 stopgain,17_7577058_A_C,CN:1 2 PACA-AU DO33376 ICGC_0135 female alive C25.0 62 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0139 1 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 2 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 3 194954895 195017992 1 1 35 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 27.11 0.03 99.8 0 1 2 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 4 172726288 172754281 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.11 99.91 0 0 0 1 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 5 NA NA 0 0 35 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 6 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 8 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 9 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 13 NA NA 0 0 35 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.01 0 NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 14 105631091 106664977 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.11 0.96 98.4 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 15 NA NA 0 0 35 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.07 NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 17 37755374 39952817 5 5 35 0 0 3 2 0 0.14 0 9 0 0 9 0 4 16 3 5 27.11 51.25 48.73 0 6 7 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 10 0.14 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 18 47979761 48687648 1 1 35 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA 5 3 3 27.11 87.39 12.57 0 0 1 Whitelist PACA-AU 0.62 0.83 NA NA 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 19 39305146 46482757 1 5 35 1 1 3 0 0 0.28 0 10 0 0 10 3 4 14 3 4 27.11 18.82 81 0 6 5 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 10 0.14 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0139 X NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0139 PACA 0.61 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-AU DO33392 ICGC_0139 male alive C25.0 70 1014 1014 NA Included Panc-AdenoCA PACA AU 1 33.36 PACA-AU::ICGC_0140 1 202082314 206228445 2 2 163 1 0 0 1 0 0.57 0.77 4 0 0 4 4 4 19 7 10 37.8 40.08 59.92 0 3 4 Whitelist PACA-AU 0.68 0.93 0 0 0.64 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 2 232111993 232512039 2 2 163 0 2 0 0 0 0.11 0.48 2 0 0 NA NA NA 25 13 25 37.8 1.24 98.67 0 2 3 Whitelist PACA-AU 0.54 0.72 0 0 0.48 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 3 14724567 169544938 1 6 163 1 3 0 0 2 0.11 0.22 6 0 0 6 6 6 9 9 9 37.8 2.17 97.72 9 2 3 Whitelist PACA-AU 0.54 0.45 0 0 0.48 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 4 16573629 37618885 2 2 163 1 1 0 0 0 0.57 0.27 1 0 0 NA NA NA 9 4 4 37.8 50.58 49.39 0 2 NA Whitelist PACA-AU 0.68 0.51 0 0 0.64 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 5 3677395 177076812 1 8 163 2 3 0 1 2 0.34 0.75 11 0 0 11 6 11 11 6 6 37.8 17.19 82.68 0 2 3 Whitelist PACA-AU 0.68 0.91 0 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 6 63449591 66029705 2 2 163 0 1 0 1 0 0.57 0.74 1 0 0 NA NA NA 10 3 3 37.8 56.96 40.18 0 2 NA Whitelist PACA-AU 0.68 0.91 0 0 0.64 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 7 5552686 145571687 1 3 163 1 2 0 0 0 0.3 0.12 4 0.02 0 4 4 4 5 5 5 37.8 99.92 0 0 3 4 Whitelist PACA-AU 0.62 0.3 0.02 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 8 2587781 143928260 1 7 163 1 4 0 1 1 0.11 1 9 0 0 9 7 9 10 7 7 37.8 20.62 79.33 0 2 3 Whitelist PACA-AU 0.47 1 0 0 0.48 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 13 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 9 120895082 134273586 1 2 163 1 1 0 0 0 0.57 1 2 0 0 NA NA NA 6 3 3 37.8 81.1 18.2 0 0 1 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 10 54091766 111723152 1 4 163 1 3 0 0 0 0.11 0.71 6 0 0 6 6 6 7 7 7 37.8 0.19 99.63 0 2 3 Whitelist PACA-AU 0.54 0.9 0 0 0.48 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 11 32758465 75006148 1 5 163 0 5 0 0 0 0 0.46 10 0 0 10 10 10 11 11 11 37.8 0.49 99.09 0 2 3 Whitelist PACA-AU 0.1 0.7 0 0 0.07 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 12 105531295 122400663 3 4 163 0 0 2 1 1 0.3 0.71 4 0 0 4 4 4 5 4 4 37.8 35.67 64.25 0 2 3 Whitelist PACA-AU 0.68 0.9 0 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 13 73555055 73632988 3 3 163 1 0 1 1 0 0.8 0.28 2 0 0 NA NA NA 5 5 5 37.8 3.5 96.5 0 2 3 Whitelist PACA-AU 0.87 0.52 0 0 0.84 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 14 91799230 92706715 3 3 163 0 1 1 1 0 0.8 0.01 5 0 0 5 4 5 16 4 9 37.8 4.45 92.32 0 2 3 Whitelist PACA-AU 0.87 0.03 0 0 0.84 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 15 20586680 49614290 1 3 163 0 2 1 0 0 0.3 0.1 5 0 0 5 5 5 8 8 8 37.8 73.71 21.35 0 1 2 Whitelist PACA-AU 0.62 0.26 0 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 16 26513618 89600393 1 7 163 0 4 0 0 3 0.01 0.04 10 0 0 10 5 5 11 6 6 37.8 33.06 66.57 1 2 1 Whitelist PACA-AU 15 0.47 0.15 0 0 0.16 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 17 28840466 79518858 1 8 163 0 6 0 1 1 0 0.01 16 0 0 16 8 14 18 9 9 37.8 54.34 41.23 0 2 3 Whitelist PACA-AU 0.06 0.06 0 0 0.09 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 18 1728416 75613611 1 3 163 1 1 1 0 0 0.8 0.63 5 0 0 5 4 5 5 4 5 37.8 92.05 3.31 0 1 2 Whitelist PACA-AU 0.87 0.84 0 0 0.84 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 19 3332066 35621967 4 4 163 0 2 2 0 0 0.26 0 19 0 0 19 4 4 24 4 6 37.8 58.7 34.02 1 5 2 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 20 13718770 62698169 1 2 163 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 3 37.8 98.98 0.77 0 3 2 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 21 42953132 43006835 1 1 163 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 37.8 0.15 77.2 0 2 NA Whitelist PACA-AU 0.62 0.7 NA NA 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 22 28116408 40404531 1 3 163 0 0 2 1 0 0.3 0.05 8 0 0 8 0 6 10 0 6 37.8 37.86 62.14 0 3 1 Whitelist PACA-AU 0.62 0.15 0 0 0.59 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0140 X 120935126 121322544 2 2 163 0 2 0 0 0 0.11 0.59 3 0 0 NA NA NA 7 5 5 37.8 99.35 0.42 0 1 2 Whitelist PACA-AU 0.54 0.81 0 0 0.48 0 No PACA-AU ICGC_0140 PACA 0.85 1.96 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO33400 ICGC_0140 female alive C25.0 76 1043 1043 NA Included Panc-AdenoCA PACA AU 1 34.31 PACA-AU::ICGC_0141 1 104412995 238866122 1 2 51 1 1 0 0 0 0.57 0.8 4 0.05 0 4 3 4 5 3 3 57.89 2.64 97.36 0 2 1 Whitelist PACA-AU 0.68 0.95 0.06 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 4 0.04 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 2 73290958 74586080 1 2 51 0 0 1 1 0 0.57 0.44 2 NA 0 NA NA NA NA NA NA 57.89 99.9 0 0 3 5 Whitelist PACA-AU 0.68 0.69 NA 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 4 0.04 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 3 60644844 116611384 1 3 51 1 0 1 0 1 0.57 0.17 3 0 0 NA NA NA NA NA NA 57.89 83.38 13.54 0 1 2 Whitelist PACA-AU 0.62 0.38 0 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 5 0.05 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 4 NA NA 0 0 51 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 5 922366 12297361 1 1 51 1 0 0 0 0 0.39 0.77 3 NA NA NA NA NA 5 4 4 57.89 28.73 71.13 4 3 2 Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 7 NA NA 0 0 51 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 8 36571942 39042226 1 4 51 1 0 1 0 2 0.57 0.04 6 0 0 6 6 6 10 9 10 57.89 61.3 35.28 0 1 2 Whitelist PACA-AU 0.68 0.15 0 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 6 0.06 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 9 9119568 32773796 1 1 51 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 57.89 16.75 82.55 0 1 2 Whitelist PACA-AU 0.62 0.7 NA NA 0.59 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 10 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.91 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 11 74654277 80720844 2 2 51 1 0 1 0 0 0.57 0 3 0 0 NA NA NA 9 3 6 57.89 67.91 31.53 0 4 3 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 4 0.04 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 12 21260790 26368272 3 4 51 1 0 1 1 1 0.8 0 7 0 0 7 5 7 26 6 6 57.89 85.44 14.48 0 7 5 Whitelist PACA-AU 1 0 0 0 0.84 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 7 0.07 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 13 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 15 NA NA 0 0 51 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.38 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 16 NA NA 0 0 51 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.64 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 17 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 18 NA NA 0 0 51 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.36 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 19 10062003 20908827 2 5 51 1 0 0 1 3 0.57 0 10 0 0 10 6 7 11 6 7 57.89 98.67 1.16 0 3 1 Whitelist PACA-AU 8 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 7 0.07 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 20 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0141 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0141 PACA 0.55 2.49 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578271_-_T,CN:1 3 PACA-AU DO33472 ICGC_0141 female deceased C25.0 75 388 388 NA Included Panc-AdenoCA PACA AU 1 12.76 PACA-AU::ICGC_0143 1 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 2 4907489 4937863 1 1 44 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 32.57 0 99.9 0 2 NA Whitelist PACA-AU 0.62 0.4 NA NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 3 NA NA 0 0 44 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.62 NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 4 87878925 185628330 1 2 44 1 1 0 0 0 0.57 1 3 0 0 NA NA NA NA NA NA 32.57 0.02 99.98 0 2 3 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 4 0.05 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 5 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 6 162732968 162783144 1 1 44 0 0 1 0 0 0.39 0.19 2 0.01 NA NA NA NA 5 3 3 32.57 99.74 0.08 0 0 1 Whitelist PACA-AU 0.62 0.41 0.01 NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 8 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 9 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 11 24465295 26043864 2 2 44 1 0 0 1 0 0.57 0.15 2 0 0 NA NA NA NA NA NA 32.57 22.1 77.47 0 1 3 Whitelist PACA-AU 0.68 0.35 0 0 0.64 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 4 0.05 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 12 53335856 53430420 1 1 44 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 9 3 6 32.57 41.83 58.09 0 2 3 Whitelist PACA-AU 0.62 0.01 0 NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 14 97038710 97201909 1 1 44 0 1 0 0 0 0.39 0.4 2 NA NA NA NA NA 4 3 4 32.57 0.15 96.99 0 2 3 Whitelist PACA-AU 0.62 0.65 NA NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 15 20456980 20625970 1 1 44 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 0 4 32.57 25.08 70.15 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 16 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 17 7165014 69047807 1 5 44 2 3 0 0 0 0.14 0 21 0 0 21 4 9 22 4 9 32.57 48.93 51.07 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 10 0.11 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 18 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 19 44988787 45169747 1 2 44 1 1 0 0 0 0.57 0.21 4 NA 0 4 4 4 5 5 5 32.57 0.23 99.6 0 2 3 Whitelist PACA-AU 0.68 0.44 NA 0 0.64 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 4 0.05 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 21 26620054 26645682 4 4 44 1 1 1 1 0 1 0 3 0 0 NA NA NA NA NA NA 32.57 0.05 77.3 0 2 1 Whitelist PACA-AU 1 0 0 0 1 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 8 0.09 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 22 38421926 38788014 1 1 44 0 1 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 32.57 0.71 99.29 0 2 3 Whitelist PACA-AU 0.62 0.66 NA NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0143 X 104755358 104778529 1 1 44 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 32.57 23.43 76.35 0 0 2 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0143 PACA 0.35 2.04 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO33408 ICGC_0143 female alive C25.0 68 909 909 NA Included Panc-AdenoCA PACA AU 1 29.9 PACA-AU::ICGC_0144 1 16037392 202149314 1 9 124 3 1 0 0 5 0.11 0.18 17 0 0 17 5 7 20 5 5 52.37 54.72 42.31 0 4 1 Whitelist PACA-AU 0.15 0.39 0 0 0.48 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 13 0.05 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 2 24813747 83448394 2 3 124 0 0 1 1 1 0.57 0.75 7 0 0 7 6 7 11 10 11 52.37 82.02 17.87 0 3 4 Whitelist PACA-AU 0.62 0.92 0 0 0.64 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 5 0.02 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 3 60271992 109156675 1 3 124 3 0 0 0 0 0.03 0.11 9 0 0 9 4 4 13 4 5 52.37 52.45 44.35 0 2 3 Whitelist PACA-AU 0.41 0.29 0 0 0.33 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 6 0.02 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 4 19891039 182875807 4 8 124 1 3 0 0 4 0.11 0.47 9 0 0 9 3 5 9 3 5 52.37 13.18 86.8 0 2 0 Whitelist PACA-AU 0.62 0.72 0 0 0.48 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 12 0.05 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 5 164976035 164995302 1 1 124 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 8 6 6 52.37 97.32 0.01 0 2 3 Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 6 57989636 162849567 1 4 124 3 0 0 0 1 0.03 1 7 0 0 7 5 7 14 5 5 52.37 36.28 60.88 0 2 0 Whitelist PACA-AU 0.54 1 0 0 0.33 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 7 0.03 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 7 62364486 62413529 1 1 124 1 0 0 0 0 0.39 0.42 1 0.01 NA NA NA NA 6 3 5 52.37 93.28 6.49 0 4 NA Whitelist PACA-AU 0.62 0.67 0.01 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 8 811440 126333562 1 7 124 1 1 0 1 4 0.8 0.06 17 0 0 17 4 6 23 4 6 52.37 67.72 28.86 0 5 4 Whitelist PACA-AU 0.62 0.2 0 0 0.84 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 10 0.04 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 9 8939532 38303726 1 4 124 4 0 0 0 0 0.01 1 10 0 0 10 5 9 12 5 7 52.37 70.03 29.8 0 2 0 Whitelist PACA-AU 0.21 1 0 0 0.16 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 8 0.03 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 10 108147386 108160055 1 1 124 1 0 0 0 0 0.39 0.28 1 0 NA NA NA NA 8 3 3 52.37 37.68 62.2 0 4 NA Whitelist PACA-AU 0.62 0.53 0 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 11 NA NA 0 0 124 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 12 46991275 62214042 1 8 124 2 0 2 0 4 0.26 0 15 0 0 15 3 4 22 3 3 52.37 51.58 48.34 0 8 17 Whitelist PACA-AU 0.87 0 0 0 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 12 0.05 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 13 19894587 57024125 1 5 124 0 2 0 0 3 0.11 0.21 4 0 0 4 3 4 5 3 3 52.37 32.24 64.64 0 4 2 Whitelist PACA-AU 0.62 0.43 0 0 0.48 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 7 0.03 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 14 60564474 60892630 1 1 124 0 1 0 0 0 0.39 0.6 2 0 NA NA NA NA 10 4 4 52.37 36.48 62.61 0 4 6 Whitelist PACA-AU 0.62 0.81 0 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 15 45315958 45328666 1 1 124 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA 5 3 3 52.37 4.11 90.96 0 2 NA Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 16 61463231 61966895 2 2 124 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 8 3 5 52.37 45.48 54.42 0 4 NA Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 17 NA NA 0 0 124 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.8 NA NA NA 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 18 4449772 4462894 1 1 124 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA 7 0 3 52.37 69.45 30.49 0 3 NA Whitelist PACA-AU 0.62 0.08 0 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 19 42788346 42815423 1 1 124 1 0 0 0 0 0.39 0.1 1 0 NA NA NA NA 5 4 5 52.37 84.17 8.4 0 4 NA Whitelist PACA-AU 0.62 0.26 0 NA 0.59 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 20 14907855 15171944 2 2 124 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA NA NA NA 52.37 99.5 0.04 0 4 2 Whitelist PACA-AU 0.54 0.03 0 0 0.48 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 21 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 22 NA NA 0 0 124 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0144 X 88009813 104183208 1 3 124 1 0 0 1 1 0.57 0.3 2 0 0 NA NA NA 7 3 5 52.37 58.85 41.15 0 1 2 Whitelist PACA-AU 0.62 0.54 0 0 0.64 0 No PACA-AU ICGC_0144 PACA 0.29 2.88 Panc-AdenoCA NA 5 0.02 NA 2 PACA-AU DO33984 ICGC_0144 male alive C25.0 64 847 847 NA Included Panc-AdenoCA PACA AU 1 27.86 PACA-AU::ICGC_0146 1 201964593 202130564 1 1 105 0 1 0 0 0 0.39 0.07 2 0 NA NA NA NA 4 3 3 33.07 96.94 0 0 3 4 Whitelist PACA-AU 0.62 0.2 0 NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 2 74618572 74693617 1 1 105 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 33.07 0.03 99.87 0 2 3 Whitelist PACA-AU 0.62 0.12 NA NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 3 25423800 74920530 3 21 105 2 0 0 1 18 0.3 0 12 0 0 12 12 12 13 13 13 33.07 21.37 78.51 0 1 2 Whitelist PACA-AU 5_10 0.76 0 0 0 0.59 1 High confidence PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA Canonical without polyploidization 24 0.11 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 4 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 5 13751277 82972679 1 13 105 2 0 0 0 11 0.11 0 11 0 0 11 11 11 11 11 11 33.07 0.24 99.64 1 2 1 Whitelist PACA-AU 3_10_11 0.68 0 0 0 0.48 1 Linked to high confidence PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA Canonical without polyploidization 15 0.07 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 6 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 7 44741423 44831750 1 1 105 0 1 0 0 0 0.39 0.83 2 0 NA NA NA NA NA NA NA 33.07 0.06 99.72 0 2 3 Whitelist PACA-AU 0.62 0.97 0 NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 8 49193256 128438807 1 3 105 2 1 0 0 0 0.3 0.38 5 0 0 5 3 5 5 3 3 33.07 0.22 99.78 0 2 1 Whitelist PACA-AU 0.62 0.63 0 0 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 9 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 10 3251990 120467283 18 44 105 6 7 3 2 26 0.29 0 42 0 0 42 32 42 44 33 33 33.07 18.74 81.09 0 2 1 Whitelist PACA-AU 3_5 0.99 0 0 0 0.59 1 High confidence PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA Canonical without polyploidization 62 0.3 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 11 44273470 122909222 6 9 105 2 2 1 1 3 0.88 0.01 7 0 0 7 7 7 7 7 7 33.07 25.48 70.75 0 2 1 Whitelist PACA-AU 5 0.85 0.05 0 0 0.91 1 High confidence PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA Canonical without polyploidization 15 0.07 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 12 70756030 70788812 1 2 105 0 0 1 1 0 0.57 0.82 3 0 0 NA NA NA 7 3 5 33.07 30.35 69.56 0 2 0 Whitelist PACA-AU 0.68 0.96 0 0 0.64 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 13 71502362 71521616 1 1 105 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 33.07 0.02 99.98 0 1 2 Whitelist PACA-AU 0.62 0.52 NA NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 14 21362049 21510628 1 1 105 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 33.07 0 99.09 0 2 NA Whitelist PACA-AU 0.62 0.51 NA NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 15 59802005 63237318 1 2 105 0 1 1 0 0 0.57 0.22 6 0 0 6 6 6 8 7 7 33.07 50.89 48.98 0 2 3 Whitelist PACA-AU 0.68 0.45 0 0 0.64 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 16 15941560 88944435 1 2 105 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 33.07 0.24 99.66 0 2 3 Whitelist PACA-AU 0.54 1 NA 0 0.48 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 17 40663907 40746174 1 1 105 0 1 0 0 0 0.39 0.37 1 0 NA NA NA NA 4 3 3 33.07 17.19 82.79 0 2 NA Whitelist PACA-AU 0.62 0.62 0 NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 18 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 19 42300905 42339080 1 1 105 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 33.07 0 99.83 0 2 NA Whitelist PACA-AU 0.62 0.9 NA NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 20 41165074 46138733 1 3 105 0 1 1 1 0 0.8 0.5 3 0 0 NA NA NA NA NA NA 33.07 0.1 98.91 0 2 3 Whitelist PACA-AU 0.87 0.74 0 0 0.84 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 21 NA NA 0 0 105 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.62 NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 22 30498865 30770516 1 1 105 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 33.07 0 100 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0146 X NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0146 PACA 0.38 1.76 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33480 ICGC_0146 male alive C25.0 52 1054 1054 NA Included Panc-AdenoCA PACA AU 1 34.67 PACA-AU::ICGC_0149 1 152851757 157102261 4 5 238 2 0 1 1 1 0.57 0 8 0 0 8 4 5 28 6 6 38.95 20.36 79.64 1 2 1 Whitelist PACA-AU 0.68 0.01 0 0 0.64 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 2 69990116 219270259 1 7 238 0 5 0 0 2 0 0.41 17 0 0 17 5 8 19 5 8 38.95 24.14 73.14 0 2 4 Whitelist PACA-AU 0.13 0.66 0 0 0.07 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 3 114830819 194054530 5 6 238 2 1 1 1 1 0.9 0.8 6 0 0 6 5 6 15 11 11 38.95 28.24 71.62 0 2 1 Whitelist PACA-AU 0.93 0.95 0 0 0.92 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 4 12114521 18334308 4 7 238 3 0 1 0 3 0.11 0.79 5 0 0 5 5 5 11 6 6 38.95 50.24 49.57 2 1 2 Whitelist PACA-AU 0.77 0.95 0 0 0.48 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 5 10278549 10342032 1 1 238 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 4 4 38.95 67.25 32.63 0 2 3 Whitelist PACA-AU 0.62 0.02 0 NA 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 6 74453127 102009960 2 3 238 0 0 1 1 1 0.57 0.02 2 0 0 NA NA NA 4 4 4 38.95 56.29 43.46 3 1 2 Whitelist PACA-AU 0.62 0.08 0 0 0.64 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 7 101910158 101940288 1 1 238 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 38.95 0.02 99.74 1 2 3 Whitelist PACA-AU 0.62 0.04 0 NA 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 8 39662139 131797224 63 63 238 16 18 11 18 0 0.56 0 59 0 0 59 6 7 61 6 7 38.95 95.6 0.95 18 3 5 Whitelist PACA-AU 0.68 0 0 0 0.64 0 Low confidence PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA With other complex events 126 0.26 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 9 20746281 36604771 1 3 238 2 1 0 0 0 0.3 0.32 7 0 0 7 3 7 8 3 3 38.95 23.68 75.62 1 2 1 Whitelist PACA-AU 0.62 0.57 0 0 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 10 35135250 121630826 1 7 238 0 6 0 1 0 0 0.28 5 0 0 5 5 5 5 5 5 38.95 0.03 99.79 0 2 3 Whitelist PACA-AU 0.13 0.52 0 0 0.09 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 11 3949684 102759731 1 9 238 3 4 0 0 2 0.06 0.54 10 0 0 10 7 10 13 7 7 38.95 81.22 15.31 0 3 2 Whitelist PACA-AU 0.54 0.77 0 0 0.48 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 12 71643774 71663963 1 1 238 0 1 0 0 0 0.39 0.13 1 0 NA NA NA NA NA NA NA 38.95 3.06 96.86 0 2 NA Whitelist PACA-AU 0.62 0.31 0 NA 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 13 NA NA 0 0 238 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 14 43196535 55604384 1 2 238 0 2 0 0 0 0.11 0.04 3 NA 0 NA NA NA NA NA NA 38.95 99.06 0.03 0 1 2 Whitelist PACA-AU 0.54 0.13 NA 0 0.48 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 15 37735821 84222075 1 6 238 0 3 1 1 1 0.28 1 8 0 0 8 5 8 8 5 5 38.95 70.59 29.41 2 2 1 Whitelist PACA-AU 0.54 1 0 0 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 16 67486607 70744021 1 2 238 0 2 0 0 0 0.11 0.69 3 0 0 NA NA NA NA NA NA 38.95 0.06 99.84 0 2 3 Whitelist PACA-AU 0.54 0.89 0 0 0.48 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 17 19793000 73771570 1 3 238 0 2 0 0 1 0.11 0.43 5 0.09 0 5 3 5 6 3 6 38.95 0.17 94.85 0 2 3 Whitelist PACA-AU 0.41 0.68 0.09 0 0.48 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 18 NA NA 0 0 238 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.68 0 NA NA 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 19 11211022 39443390 1 5 238 0 3 0 0 2 0.03 0.24 5 0 0 5 5 5 5 5 5 38.95 0.96 98.87 0 2 3 Whitelist PACA-AU 0.62 0.48 0 0 0.33 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 20 1434283 54760891 1 7 238 0 4 0 1 2 0.04 0.18 10 0 0 10 5 5 10 5 5 38.95 71.28 21.64 0 4 2 Whitelist PACA-AU 0.47 0.4 0 0 0.36 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 21 NA NA 0 0 238 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 22 31219519 41878837 1 4 238 1 2 0 0 1 0.3 0.02 5 0 0 5 3 5 9 4 4 38.95 18.29 81.71 0 3 2 Whitelist PACA-AU 0.68 0.1 0 0 0.59 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0149 X 12994917 66559691 1 3 238 0 3 0 0 0 0.03 0.55 9 0 0 9 8 9 12 10 10 38.95 37.39 59.21 0 2 3 Whitelist PACA-AU 0.41 0.78 0 0 0.33 0 No PACA-AU ICGC_0149 PACA 0.56 1.87 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 PACA-AU DO33552 ICGC_0149 female alive C25.0 70 873 873 NA Included Panc-AdenoCA PACA AU 1 28.72 PACA-AU::ICGC_0150 1 NA NA 0 0 115 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.01 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 2 198923115 199012192 1 1 115 1 0 0 0 0 0.39 0.5 2 0 NA NA NA NA NA NA NA 88.1 97.31 0 0 3 4 Whitelist PACA-AU 0.62 0.74 0 NA 0.59 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 3 88711050 88827815 1 2 115 1 0 0 0 1 0.39 0.2 1 0 NA NA NA NA NA NA NA 88.1 99.95 0 0 4 NA Whitelist PACA-AU 0.54 0.42 0 NA 0.59 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 3 0.01 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 4 NA NA 0 0 115 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.7 0 NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 5 NA NA 0 0 115 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.31 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 6 166706842 166836004 2 2 115 0 0 1 1 0 0.57 0.69 4 0 0 4 0 4 11 5 6 88.1 94.18 2.89 0 3 2 Whitelist PACA-AU 0.68 0.89 0 0 0.64 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 4 0.02 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 7 64853542 109005147 2 4 115 0 0 2 0 2 0.11 0.41 2 0 0 NA NA NA 4 0 0 88.1 97.42 0 1 4 5 Whitelist PACA-AU 0.68 0.65 0 0 0.48 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 6 0.03 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 8 NA NA 0 0 115 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.12 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 9 NA NA 0 0 115 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 0 NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 10 NA NA 0 0 115 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.21 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 11 NA NA 0 0 115 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 12 2799826 39494499 1 2 115 1 0 0 0 1 0.39 0.38 5 NA 0.73 5 0 3 7 0 0 88.1 99.93 0 0 4 6 Whitelist PACA-AU 0.54 0.63 NA 0.73 0.59 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 3 0.01 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 13 NA NA 0 0 115 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 14 20266678 20291660 1 2 115 0 1 0 0 1 0.39 1 1 NA NA NA NA NA NA NA NA 88.1 85 0 0 4 NA Whitelist PACA-AU 0.68 1 NA NA 0.59 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 3 0.01 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 15 NA NA 0 0 115 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 16 6742539 30051601 1 4 115 3 0 0 0 1 0.03 0.01 3 0 0 NA NA NA 6 3 3 88.1 95.15 0.33 0 2 3 Whitelist PACA-AU 0.54 0.06 0 0 0.33 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 7 0.03 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 17 NA NA 0 0 115 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 18 2140182 30431754 3 5 115 1 1 1 0 2 0.8 0 17 0 0 17 4 6 21 4 6 88.1 95.35 0 0 3 4 Whitelist PACA-AU 0.68 0 0 0 0.84 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 8 0.03 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 19 14991068 24021988 8 12 115 3 1 3 1 4 0.57 0 17 0 0 17 5 10 29 5 6 88.1 97.23 2.3 5 4 5 Whitelist PACA-AU 0.68 0 0 0 0.64 0 Low confidence PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA With other complex events 20 0.09 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 20 6018677 16964465 5 7 115 2 0 1 2 2 0.53 0 1 0 0 NA NA NA NA NA NA 88.1 99.01 0 0 4 NA Whitelist PACA-AU 0.68 0.02 0 0 0.64 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 12 0.05 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 21 25164790 45011847 3 3 115 1 2 0 0 0 0.3 0.05 3 0 0 NA NA NA 4 4 4 88.1 70.29 0 0 4 3 Whitelist PACA-AU 0.62 0.17 0 0 0.59 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 6 0.03 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 22 19373897 31967897 3 5 115 1 0 1 1 2 0.8 0.01 8 0 0 8 3 7 9 3 7 88.1 76.22 0 0 5 3 Whitelist PACA-AU 0.68 0.05 0 0 0.84 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 8 0.03 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0150 X 75980767 125584324 1 2 115 2 0 0 0 0 0.11 0.29 1 NA 0 NA NA NA NA NA NA 88.1 100 0 0 1 NA Whitelist PACA-AU 0.54 0.54 NA 0 0.48 0 No PACA-AU ICGC_0150 PACA 0.65 3.71 Panc-AdenoCA NA 4 0.02 NA 4 PACA-AU DO33488 ICGC_0150 male alive C25.0 61 844 844 NA Included Panc-AdenoCA PACA AU 1 27.76 PACA-AU::ICGC_0153 1 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 2 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 3 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 4 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 5 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 6 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 7 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 8 117917466 137986169 4 4 66 0 2 1 1 0 0.57 0 8 0 0 8 4 8 27 4 4 12.04 16.79 79.54 4 3 2 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 9 21595378 30421419 1 2 66 2 0 0 0 0 0.11 0.04 6 0 0 6 4 6 10 5 5 12.04 62.49 36.81 0 2 3 Whitelist PACA-AU 0.54 0.15 0 0 0.48 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 10 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 11 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 12 34164117 66036029 3 4 66 1 1 1 0 1 0.8 0.03 10 0 0 10 10 10 10 10 10 12.04 67.54 28.72 0 1 2 Whitelist PACA-AU 0.68 0.12 0 0 0.84 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 13 NA NA 0 0 66 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.74 NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 14 106644869 106676758 1 1 66 0 0 1 0 0 0.39 0.15 1 0 NA NA NA NA NA NA NA 12.04 0.27 99.1 0 5 NA Whitelist PACA-AU 0.62 0.36 0 NA 0.59 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 15 31894224 88819934 3 3 66 2 0 0 1 0 0.3 0.01 1 0 0 NA NA NA 4 3 3 12.04 1.07 98.8 0 2 NA Whitelist PACA-AU 0.62 0.05 0 0 0.59 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 16 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 17 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 18 NA NA 0 0 66 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.89 NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 19 15166669 16436920 5 9 66 1 0 2 2 4 0.53 0 9 0 0 9 4 6 21 4 4 12.04 80.25 12.47 0 7 3 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 14 0.11 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 20 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 22 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0153 X 87412219 93020215 1 2 66 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 12.04 0 99.78 0 2 NA Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0153 PACA 0.55 1.92 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578206_C_T,CN:1 1 PACA-AU DO33544 ICGC_0153 female deceased C25.0 83 412 412 NA Included Panc-AdenoCA PACA AU 1 13.55 PACA-AU::ICGC_0185 1 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 2 143873853 152183351 1 1 13 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.02 16.04 81.27 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 2 0.08 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 4 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 9 22047393 35258283 1 3 13 0 0 1 2 0 0.3 0 7 0 0 7 7 7 11 8 8 25.02 94.91 4.96 0 1 2 Whitelist PACA-AU 0.62 0.01 0 0 0.59 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 6 0.23 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 10 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 12 34752085 52614534 4 4 13 1 1 1 1 0 1 0 7 0 0 7 7 7 12 7 7 25.02 77.81 18.44 0 2 1 Whitelist PACA-AU 1 0 0 0 1 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 8 0.31 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 17 29976372 46213619 1 3 13 0 0 0 2 1 0.11 0 7 NA 0 7 4 6 7 4 6 25.02 55.78 44.22 0 1 2 Whitelist PACA-AU 0.62 0.02 NA 0 0.48 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 5 0.19 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0185 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0185 PACA 0.54 1.91 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578213_-_AA,CN:1 2 PACA-AU DO34656 ICGC_0185 female alive C25.0 61 834 834 NA Included Panc-AdenoCA PACA AU 1 27.43 PACA-AU::ICGC_0192 1 NA NA 0 0 93 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.79 0 NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 2 72049884 241434341 1 12 93 4 0 1 1 6 0.11 0 13 0 0 13 6 13 14 6 6 25.26 48.92 47.98 8 2 3 Whitelist PACA-AU 0.68 0 0 0 0.48 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 18 0.1 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 3 55310000 55356648 1 1 93 1 0 0 0 0 0.39 0.15 1 0 NA NA NA NA NA NA NA 25.26 46.36 53.59 0 2 NA Whitelist PACA-AU 0.62 0.36 0 NA 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 4 187386769 187402573 1 1 93 1 0 0 0 0 0.39 0.41 2 0 NA NA NA NA 4 4 4 25.26 11.11 88.88 0 1 2 Whitelist PACA-AU 0.62 0.65 0 NA 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 5 93287145 148337229 3 7 93 1 1 0 1 4 0.8 0.08 5 0 0 5 0 4 7 4 4 25.26 25.16 74.69 0 2 1 Whitelist PACA-AU 0.62 0.24 0 0 0.84 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 10 0.05 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 6 116045425 129682280 1 1 93 1 0 0 0 0 0.39 0.51 2 0 0 NA NA NA 8 6 6 25.26 22.13 77.73 0 1 2 Whitelist PACA-AU 0.62 0.75 0 0 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 7 61544092 122224986 1 3 93 1 2 0 0 0 0.3 0.16 3 0 0 NA NA NA 5 4 4 25.26 40.07 59.73 0 2 3 Whitelist PACA-AU 0.62 0.37 0 0 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 8 NA NA 0 0 93 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.59 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 9 10610122 123016608 1 4 93 2 2 0 0 0 0.26 0.79 10 0.02 0 10 5 5 11 5 5 25.26 1.99 94.9 0 2 3 Whitelist PACA-AU 0.62 0.94 0.03 0 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 8 0.04 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 10 15123653 104808622 1 3 93 2 0 1 0 0 0.3 0.21 3 0 0 NA NA NA 5 5 5 25.26 7.51 92.31 0 2 1 Whitelist PACA-AU 0.62 0.43 0 0 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 11 NA NA 0 0 93 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 12 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 13 NA NA 0 0 93 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.5 0 NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 14 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 15 24291126 25387515 1 1 93 1 0 0 0 0 0.39 0.33 2 0 NA NA NA NA NA NA NA 25.26 1.07 98.93 0 1 2 Whitelist PACA-AU 0.62 0.58 0 NA 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 16 NA NA 0 0 93 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 17 NA NA 0 0 93 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.91 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 18 NA NA 0 0 93 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.28 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 19 NA NA 0 0 93 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.13 0 NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 20 NA NA 0 0 93 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 21 NA NA 0 0 93 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.57 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 22 NA NA 0 0 93 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.55 NA NA NA 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0192 X 129171722 129181847 1 1 93 1 0 0 0 0 0.39 0.81 1 0 NA NA NA NA NA NA NA 25.26 86.92 13.08 0 1 NA Whitelist PACA-AU 0.62 0.96 0 NA 0.59 0 No PACA-AU ICGC_0192 PACA 0.48 2.03 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34680 ICGC_0192 male deceased C25.0 75 99 99 NA Included Panc-AdenoCA PACA AU 1 3.26 PACA-AU::ICGC_0199 1 39413245 39449971 1 1 54 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 76.42 100 0 0 3 NA Whitelist PACA-AU 0.62 0.32 NA NA 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 2 109779279 139790794 12 13 54 3 2 3 4 1 0.88 0 17 0 0 17 17 17 22 18 18 76.42 99.65 0.25 0 5 3 Whitelist PACA-AU 0.9 0 0 0 0.91 1 High confidence PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA After polyploidization 25 0.23 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 3 17644026 181663840 1 6 54 5 0 1 0 0 0.01 0.05 15 0 0 15 6 8 16 7 9 76.42 62.6 37.37 0 2 4 Whitelist PACA-AU 0.25 0.17 0 0 0.19 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 12 0.11 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 4 117162806 117611922 2 2 54 0 0 1 1 0 0.57 0.78 4 0 0 4 0 3 8 3 5 76.42 99.93 0.06 0 3 0 Whitelist PACA-AU 0.68 0.94 0 0 0.64 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 4 0.04 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 5 122945305 146421432 3 3 54 0 0 1 2 0 0.3 0.39 7 0 0 7 5 7 13 5 5 76.42 98.51 1.36 2 3 5 Whitelist PACA-AU 0.62 0.64 0 0 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 6 0.06 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 6 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 7 108121294 117120723 1 3 54 1 0 1 1 0 0.8 0.54 4 0 0 4 4 4 6 5 6 76.42 97.6 2.17 0 2 3 Whitelist PACA-AU 0.87 0.77 0 0 0.84 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 6 0.06 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 8 89943263 141041767 2 2 54 0 0 1 1 0 0.57 0.35 4 0.04 0 4 4 4 9 6 7 76.42 99.99 0 0 3 5 Whitelist PACA-AU 0.68 0.61 0.04 0 0.64 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 4 0.04 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 9 133811913 134532775 1 1 54 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 6 4 4 76.42 21.13 75.77 0 2 4 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 10 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 11 63580091 131569528 1 4 54 3 0 0 0 1 0.03 0.32 8 0 0 8 5 8 9 6 9 76.42 97.74 1.83 0 2 3 Whitelist PACA-AU 0.21 0.57 0 0 0.33 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 7 0.06 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 12 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 13 102272065 110213702 2 2 54 0 0 1 1 0 0.57 0.12 4 0 0 4 4 4 9 9 9 76.42 100 0 0 1 3 Whitelist PACA-AU 0.68 0.3 0 0 0.64 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 4 0.04 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 14 NA NA 0 0 54 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.89 NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 16 78585366 78617603 1 1 54 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 76.42 99.9 0 0 3 4 Whitelist PACA-AU 0.62 0.86 NA NA 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 17 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 18 NA NA 0 0 54 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 19 7495878 8298549 1 1 54 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 76.42 99.83 0 0 1 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0199 X 103118113 103376445 1 1 54 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 76.42 0.17 99.83 0 0 2 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 1 No PACA-AU ICGC_0199 PACA 0.22 3.05 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO34600 ICGC_0199 male deceased C25.0 77 537 537 NA Included Panc-AdenoCA PACA AU 1 17.66 PACA-AU::ICGC_0201 1 NA NA 0 0 71 0 0 0 0 0 NA 1 NA 0.1 NA NA NA NA 12 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 0.1 NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 2 111600004 112463892 2 2 71 0 0 1 1 0 0.57 0.67 2 0 0 NA NA NA 4 3 3 73.38 99.89 0 0 3 4 Whitelist PACA-AU 0.68 0.87 0 0 0.64 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 3 116758229 117555398 1 2 71 1 1 0 0 0 0.57 0.24 4 NA 0 4 3 4 5 3 3 73.38 99.78 0.09 0 3 2 Whitelist PACA-AU 0.68 0.48 NA 0 0.64 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 4 6600302 6707110 1 1 71 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 9 9 9 73.38 7.83 89.8 0 2 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 5 128574883 177500435 1 3 71 0 3 0 0 0 0.03 0.46 4 0 0 4 3 4 6 3 5 73.38 95.97 3.91 0 3 4 Whitelist PACA-AU 0.41 0.7 0 0 0.33 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 6 95877539 160826411 5 5 71 0 3 1 1 0 0.28 0.07 7 0 0 7 7 7 11 9 11 73.38 84.86 14.99 0 4 2 Whitelist PACA-AU 0.62 0.22 0 0 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 7 149736723 149777331 1 1 71 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 73.38 99.78 0 0 4 NA Whitelist PACA-AU 0.62 0.41 NA NA 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 8 20192196 30529806 1 4 71 0 1 1 1 1 0.8 0 7 0 0 7 5 7 10 8 8 73.38 83.71 16.29 0 4 2 Whitelist PACA-AU 0.68 0.01 0 0 0.84 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 7 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 9 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 10 16582849 16705487 2 2 71 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA 4 4 4 73.38 99.82 0 0 3 NA Whitelist PACA-AU 0.68 0.07 0 0 0.64 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 11 3799330 3811337 1 1 71 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 73.38 99.44 0 0 3 5 Whitelist PACA-AU 0.62 0.51 NA NA 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 12 23431723 131424435 3 3 71 0 1 1 1 0 0.8 0.05 13 0 0 13 9 12 14 10 10 73.38 32.84 63.49 3 5 2 Whitelist PACA-AU 0.87 0.16 0 0 0.84 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 13 49028196 77017909 1 4 71 2 2 0 0 0 0.26 0.1 2 0 0 NA NA NA NA NA NA 73.38 85.42 14.58 0 2 4 Whitelist PACA-AU 0.62 0.26 0 0 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 8 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 14 38119444 38202868 1 1 71 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 73.38 96.29 0 0 3 5 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 16 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 17 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 18 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 19 10981948 14723300 1 1 71 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 10 6 6 73.38 62.2 30.53 0 2 4 Whitelist PACA-AU 0.62 0 0 NA 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 20 NA NA 0 0 71 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.87 NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 21 18155236 41227044 4 5 71 1 1 1 1 1 1 0 10 0 0 10 3 4 17 4 4 73.38 33.11 44.24 1 2 5 Whitelist PACA-AU 0.93 0 0 0 1 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 9 0.06 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 22 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0201 X 46428186 154327767 1 6 71 0 0 2 2 2 0.26 0.17 6 0 0 6 5 6 7 6 7 73.38 99.35 0.42 0 2 3 Whitelist PACA-AU 6 0.93 0.39 0 0 0.59 0 No PACA-AU ICGC_0201 PACA 0.43 3.3 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7577123_C_A;17_7578190_C_T,CN:4 5 PACA-AU DO34608 ICGC_0201 female deceased C25.0 72 709 709 NA Included Panc-AdenoCA PACA AU 1 23.32 PACA-AU::ICGC_0205 1 26994187 245430132 1 8 127 6 0 0 0 2 0 0.87 7 0 0 7 7 7 7 7 7 18.5 0.76 99.24 0 2 1 Whitelist PACA-AU 9 0.06 1 0 0 0.03 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 2 NA NA 0 0 127 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.35 0 NA NA 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 3 15467470 192620944 1 11 127 7 1 0 0 3 0 0.16 6 0 0 6 6 6 7 7 7 18.5 0.87 99.08 12 1 2 Whitelist PACA-AU 0.41 0.37 0 0 0.04 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 19 0.07 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 4 131290708 133304627 2 2 127 0 0 1 1 0 0.57 0.28 1 0 0 NA NA NA 5 3 3 18.5 0.27 99.7 0 2 NA Whitelist PACA-AU 0.68 0.53 0 0 0.64 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 5 12245850 89892282 2 10 127 0 0 3 3 4 0.11 0.02 14 0 0 14 14 14 15 15 15 18.5 12.44 87.43 0 1 2 Whitelist PACA-AU 0.62 0.07 0 0 0.48 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 6 4057229 162850009 1 2 127 2 0 0 0 0 0.11 0.04 4 NA 0.04 4 4 4 5 5 5 18.5 6.39 93.47 0 1 2 Whitelist PACA-AU 0.54 0.13 NA 0.04 0.48 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 7 18290267 120956658 1 2 127 2 0 0 0 0 0.11 0.07 5 NA 0 5 5 5 7 7 7 18.5 0.78 98.99 0 2 1 Whitelist PACA-AU 0.54 0.21 NA 0 0.48 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 8 466553 113346314 15 18 127 1 5 5 4 3 0.41 0 8 0 0 8 7 8 8 7 7 18.5 30.6 69.39 10 2 1 Whitelist PACA-AU 9 0.68 0 0 0 0.62 1 High confidence PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA Canonical without polyploidization 33 0.13 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 9 9187524 139636859 1 12 127 6 0 1 0 5 0 0 11 0 0 11 4 7 12 5 5 18.5 54.78 44.51 0 1 0 Whitelist PACA-AU 1_8 0.07 0.01 0 0 0.09 1 Linked to high confidence PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA With other complex events 19 0.07 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 10 111152737 111742627 5 5 127 1 1 2 1 0 0.9 0.01 3 0 0 NA NA NA 9 9 9 18.5 3.1 96.73 2 2 1 Whitelist PACA-AU 0.93 0.04 0 0 0.92 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 11 NA NA 0 0 127 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.12 NA NA NA 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 12 11479564 13256590 2 2 127 2 0 0 0 0 0.11 1 4 0 0 4 3 4 7 4 4 18.5 21.3 78.61 1 1 0 Whitelist PACA-AU 0.54 1 0 0 0.48 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 13 103906309 114751077 1 2 127 2 0 0 0 0 0.11 0.8 3 NA 0 NA NA NA 4 4 4 18.5 0.49 99.15 0 1 2 Whitelist PACA-AU 0.54 0.95 NA 0 0.48 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 14 84291922 97899446 2 2 127 1 0 1 0 0 0.57 0.3 1 0 0 NA NA NA NA NA NA 18.5 1.15 97.93 2 2 NA Whitelist PACA-AU 0.68 0.55 0 0 0.64 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 15 30230259 32907567 4 4 127 1 1 1 1 0 1 0.41 7 0 0 7 7 7 9 9 9 18.5 99.9 0 0 1 0 Whitelist PACA-AU 1 0.65 0 0 1 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 16 15585474 15604393 2 2 127 1 0 0 1 0 0.57 0.78 2 NA 0 NA NA NA 9 7 7 18.5 28.37 66.5 0 1 3 Whitelist PACA-AU 0.68 0.93 NA 0 0.64 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 17 59435248 59705910 2 2 127 0 0 1 1 0 0.57 0.16 1 0 0 NA NA NA 4 3 3 18.5 27.34 68.22 0 2 NA Whitelist PACA-AU 0.68 0.37 0 0 0.64 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 18 20384404 29554477 5 5 127 1 0 2 2 0 0.53 0.09 5 0 0 5 3 5 9 3 3 18.5 94.94 0.41 0 2 3 Whitelist PACA-AU 0.68 0.24 0 0 0.64 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 19 NA NA 0 0 127 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 20 23700994 24080768 1 1 127 1 0 0 0 0 0.39 0.36 1 0 NA NA NA NA NA NA NA 18.5 0 98.98 0 2 NA Whitelist PACA-AU 0.62 0.61 0 NA 0.59 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 21 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 22 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0205 X 44912049 45148461 1 1 127 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 18.5 100 0 0 1 NA Whitelist PACA-AU 0.62 0.09 NA NA 0.59 1 No PACA-AU ICGC_0205 PACA 0.6 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PACA-AU DO33208 ICGC_0205 male deceased C25.0 59 281 281 NA Included Panc-AdenoCA PACA AU 1 9.24 PACA-AU::ICGC_0206 1 26961107 235714557 1 2 29 1 0 1 0 0 0.57 1 4 NA 0.01 4 4 4 5 5 5 34 0.4 99.6 0 1 2 Whitelist PACA-AU 0.68 1 NA 0.01 0.64 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 2 126747682 127133129 1 1 29 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 34 0.16 99.76 0 1 2 Whitelist PACA-AU 0.62 0.75 NA NA 0.59 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 3 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 5 100581325 100627708 1 1 29 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 34 0.03 99.84 0 2 3 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 7 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 8 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 9 9894955 19426767 2 2 29 1 0 1 0 0 0.57 0.1 5 0 0 5 5 5 7 7 7 34 23.75 73.7 0 1 2 Whitelist PACA-AU 0.68 0.27 0 0 0.64 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 10 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 12 128923174 129009279 1 1 29 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA 4 0 4 34 96.21 3.7 0 2 3 Whitelist PACA-AU 0.62 0.36 NA NA 0.59 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 13 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 14 NA NA 0 0 29 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.82 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 16 77953515 78300650 1 1 29 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 34 0 99.89 0 2 NA Whitelist PACA-AU 0.62 0.77 NA NA 0.59 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 17 NA NA 0 0 29 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 18 20987939 24921189 2 4 29 0 1 0 1 2 0.57 0 5 0 0 5 4 5 11 6 6 34 77.23 18.13 1 1 2 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 6 0.1 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 19 NA NA 0 0 29 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.69 NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 20 18198466 18240014 1 1 29 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 34 0.07 99.84 0 2 3 Whitelist PACA-AU 0.62 0.32 NA NA 0.59 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0206 X 12263784 146477352 1 3 29 2 0 0 0 1 0.11 0.18 6 NA 0 6 4 6 7 4 4 34 75.36 21.48 0 2 3 Whitelist PACA-AU 0.62 0.4 NA 0 0.48 0 No PACA-AU ICGC_0206 PACA 0.62 1.7 Panc-AdenoCA NA 5 0.09 nonsynonymous_SNV,17_7577121_A_G,CN:1 1 PACA-AU DO33200 ICGC_0206 female deceased C25.0 90 109 109 NA Included Panc-AdenoCA PACA AU 1 3.59 PACA-AU::ICGC_0207 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 2 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 3 59784626 60497954 2 2 27 0 0 1 1 0 0.57 0.43 2 0 0 NA NA NA 7 5 5 7.72 8.69 91.26 0 1 2 Whitelist PACA-AU 0.68 0.68 0 0 0.64 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 4 0.07 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 4 NA NA 0 0 27 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 6 153454648 153480296 1 1 27 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.72 0 99.85 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 7 121034912 151110416 12 12 27 5 2 3 2 0 0.57 0 6 0 0 6 6 6 7 7 7 7.72 5.4 94.38 0 1 2 Whitelist PACA-AU 0.68 0 0 0 0.64 0 Low confidence PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA Canonical without polyploidization 24 0.44 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 8 141456918 142073436 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.72 0.42 99.57 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 9 21864520 22320556 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.72 0.32 98.98 1 0 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 12 41517456 66451373 1 2 27 0 0 0 1 1 0.39 0.36 1 NA NA NA NA NA NA NA NA 7.72 0 99.92 0 2 NA Whitelist PACA-AU 0.68 0.62 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 3 0.06 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 14 67493982 68018645 1 1 27 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 7.72 0.49 98.6 0 2 3 Whitelist PACA-AU 0.62 0.8 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 18 NA NA 0 0 27 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.37 NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 19 36747178 36758581 1 1 27 0 1 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 7.72 0 99.83 0 2 NA Whitelist PACA-AU 0.62 0.66 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0207 X 31436777 31449311 1 1 27 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.72 100 0 0 1 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0207 PACA 0.61 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-AU DO33264 ICGC_0207 male deceased C25.0 80 205 205 NA Included Panc-AdenoCA PACA AU 1 6.74 PACA-AU::ICGC_0212 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 3 78965624 89386228 1 1 22 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 0 3 84.42 58.19 38.66 0 1 6 Whitelist PACA-AU 0.62 0.87 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 4 92202242 92525092 2 2 22 0 0 1 1 0 0.57 0.66 3 NA 0 NA NA NA NA NA NA 84.42 99.98 0 0 3 6 Whitelist PACA-AU 0.68 0.86 NA 0 0.64 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 4 0.09 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 6 NA NA 0 0 22 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 0 NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 8 111219215 116092246 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 84.42 67.14 29.44 0 1 5 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 9 21851195 22076425 1 1 22 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 5 0 3 84.42 84.72 12.75 0 0 2 Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 11 27482981 27575976 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 84.42 99.57 0 0 5 7 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 15 40236888 47210928 1 1 22 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 4 3 3 84.42 100 0 0 4 8 Whitelist PACA-AU 0.62 0.09 0 NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 17 55054888 69607907 3 3 22 2 1 0 0 0 0.3 0 6 0 0 6 3 6 9 4 8 84.42 61.99 38.01 2 2 4 Whitelist PACA-AU 0.62 0.02 0 0 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 6 0.14 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 18 NA NA 0 0 22 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.3 NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 20 24487862 24529779 1 1 22 0 0 1 0 0 0.39 0.08 2 NA NA NA NA NA 6 0 0 84.42 55.61 37.27 0 5 9 Whitelist PACA-AU 0.62 0.23 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 22 44526735 51215018 1 1 22 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 84.42 88.72 0 0 1 NA Whitelist PACA-AU 0.62 0.47 NA NA 0.59 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0212 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0212 PACA 0.28 4.05 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_G_T,CN:2 5 PACA-AU DO33960 ICGC_0212 male deceased C25.0 57 602 616 NA Included Panc-AdenoCA PACA AU 1 19.8 PACA-AU::ICGC_0214 1 196999875 239097447 12 12 254 5 2 3 2 0 0.57 0.82 11 0 0 11 11 11 20 15 15 31.33 19.94 80.06 0 2 1 Whitelist PACA-AU 0.68 0.96 0 0 0.64 0 High confidence PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA Canonical without polyploidization 24 0.05 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 2 1473520 230672823 142 147 254 30 44 35 33 5 0.38 0 69 0 0 69 61 69 70 61 61 31.33 15.64 84.25 0 1 2 Whitelist PACA-AU 4_X 0.62 0 0 0 0.59 0 High confidence PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA Canonical without polyploidization 289 0.57 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 3 47807028 47844482 1 1 254 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 31.33 44.34 52.58 0 1 NA Whitelist PACA-AU 0.62 0 NA NA 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 4 77735561 162014258 7 11 254 1 3 2 1 4 0.67 0.31 13 0 0 13 7 7 17 11 11 31.33 38.58 61.42 0 1 2 Whitelist PACA-AU 1 0.62 0.56 0 0 0.74 0 High confidence PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA With other complex events 18 0.04 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 5 98391041 178563199 1 6 254 4 0 0 0 2 0.01 0.01 10 0 0 10 10 10 11 11 11 31.33 12.7 87.17 0 1 2 Whitelist PACA-AU 0.04 0.03 0 0 0.16 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 6 30134127 106586942 4 4 254 1 0 1 2 0 0.57 0.89 14 0 0 14 14 14 17 17 17 31.33 55.03 44.7 0 1 2 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 7 102480479 128317781 2 2 254 0 0 1 1 0 0.57 0 4 NA 0 4 4 4 5 5 5 31.33 0.81 98.96 0 1 2 Whitelist PACA-AU 0.68 0 NA 0 0.64 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 8 NA NA 0 0 254 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.08 NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 9 20684186 32665074 1 3 254 0 0 1 2 0 0.3 0.14 4 0 0 4 3 4 7 3 3 31.33 91.98 7.86 0 1 0 Whitelist PACA-AU 0.62 0.34 0 0 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 10 82702845 110544115 2 2 254 0 0 1 1 0 0.57 0 2 NA 0 NA NA NA 5 5 5 31.33 20.86 78.96 0 1 2 Whitelist PACA-AU 0.68 0.01 NA 0 0.64 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 11 132049818 132159838 4 4 254 1 0 2 1 0 0.57 1 2 0 0 NA NA NA 5 5 5 31.33 2.33 97.25 0 1 2 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 12 127125277 132439232 1 1 254 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 31.33 21.34 78.57 0 1 2 Whitelist PACA-AU 0.62 0.02 NA NA 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 13 68241978 68442102 1 1 254 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 4 5 31.33 26.64 73.36 0 1 2 Whitelist PACA-AU 0.62 0.17 NA NA 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 14 96764208 99909140 1 1 254 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 31.33 2.93 96.16 0 1 2 Whitelist PACA-AU 0.62 0.11 NA NA 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 15 53253175 53501580 1 1 254 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 31.33 0.24 99.62 0 1 2 Whitelist PACA-AU 0.62 0.05 NA NA 0.59 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 16 NA NA 0 0 254 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 17 30917164 39303317 1 2 254 1 0 1 0 0 0.57 1 6 0 0 6 4 5 14 4 5 31.33 76.24 19.32 0 3 4 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 18 NA NA 0 0 254 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 19 NA NA 0 0 254 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 20 NA NA 0 0 254 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 21 NA NA 0 0 254 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 22 43358441 49490606 1 2 254 2 0 0 0 0 0.11 0.77 3 NA 0 NA NA NA NA NA NA 31.33 1.92 98.08 0 2 1 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 PACA-AU::ICGC_0214 X 98103871 154466373 7 8 254 0 1 3 3 1 0.28 0.15 11 0 0 11 7 11 18 14 14 31.33 33.24 66.53 2 1 2 Whitelist PACA-AU 0.68 0.35 0 0 0.59 0 Linked to high confidence PACA-AU ICGC_0214 PACA 0.47 1.82 Panc-AdenoCA Canonical without polyploidization 15 0.03 nonsynonymous_SNV,17_7578454_A_G,CN:1 2 PACA-AU DO34432 ICGC_0214 female deceased C25.0 82 400 400 NA Included Panc-AdenoCA PACA AU 1 13.16 False positive; manually removed PACA-AU::ICGC_0215 1 38203123 49587461 1 2 94 1 0 1 0 0 0.57 0.25 3 0 0 NA NA NA 7 6 6 31.77 89.11 7.86 0 1 2 Whitelist PACA-AU 0.68 0.49 0 0 0.64 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 2 15639298 124020108 1 4 94 3 0 1 0 0 0.11 0.58 6 0 0 6 5 6 8 5 5 31.77 15.88 84.02 0 2 1 Whitelist PACA-AU 0.54 0.8 0 0 0.48 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 3 62286892 174516435 1 5 94 1 3 0 0 1 0.11 1 8 0 0 8 5 8 8 5 5 31.77 36.15 63.81 1 2 1 Whitelist PACA-AU 0.45 1 0 0 0.48 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 9 0.05 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 4 90801689 182388164 1 8 94 5 2 1 0 0 0.07 0.06 20 0 0 20 5 10 21 5 5 31.77 28.91 70.99 0 1 2 Whitelist PACA-AU 0.54 0.19 0 0 0.48 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 16 0.09 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 5 143127864 145021938 2 2 94 1 1 0 0 0 0.57 0.83 2 0 0 NA NA NA 7 3 3 31.77 1.07 98.81 0 1 2 Whitelist PACA-AU 0.68 0.97 0 0 0.64 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 6 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 7 135914906 158241559 1 3 94 2 0 0 0 1 0.11 0.35 7 0 0 7 3 7 11 3 3 31.77 0.74 96.53 0 2 1 Whitelist PACA-AU 0.41 0.61 0 0 0.48 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 5 0.03 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 8 141477454 141662006 1 1 94 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 31.77 0.13 99.78 0 2 3 Whitelist PACA-AU 0.62 0.26 NA NA 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 9 12633334 22809044 20 20 94 7 7 3 3 0 0.36 0 15 0 0 15 3 4 34 8 10 31.77 46.88 50.01 0 0 2 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 40 0.21 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 10 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 11 NA NA 0 0 94 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 12 NA NA 0 0 94 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 13 51663969 94028125 1 3 94 1 2 0 0 0 0.3 1 5 0 0 5 5 5 7 7 7 31.77 100 0 0 3 4 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 14 NA NA 0 0 94 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 15 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 16 22235256 78958003 1 3 94 0 2 0 1 0 0.3 0.32 6 0 0 6 4 6 7 5 5 31.77 0.35 99.55 0 2 3 Whitelist PACA-AU 0.62 0.57 0 0 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 17 2606906 13350126 1 4 94 0 1 1 2 0 0.57 0.11 10 0 0 10 5 8 13 6 6 31.77 40.99 54.55 0 1 2 Whitelist PACA-AU 0.68 0.29 0 0 0.64 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 18 NA NA 0 0 94 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 19 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 20 14938598 15170513 1 1 94 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 31.77 40.59 52.06 0 0 1 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 22 33715356 33734969 1 1 94 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 31.77 38.54 61.46 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0215 X 7274510 31850034 1 2 94 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 31.77 99.77 0 0 0 1 Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0215 PACA 0.51 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34448 ICGC_0215 female deceased C25.0 79 719 719 NA Included Panc-AdenoCA PACA AU 1 23.65 PACA-AU::ICGC_0217 1 874277 155024259 1 2 99 0 2 0 0 0 0.11 0.02 4 NA 0.04 4 3 4 4 3 3 25.28 41.95 58.05 0 3 2 Whitelist PACA-AU 0.54 0.09 NA 0.04 0.48 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 2 69489984 239956857 1 6 99 2 1 1 0 2 0.57 0.86 9 0 0 9 8 9 10 8 8 25.28 1.72 98.19 0 1 2 Whitelist PACA-AU 0.68 0.99 0 0 0.64 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 3 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 4 NA NA 0 0 99 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.06 NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 5 12958487 12991622 1 1 99 0 0 1 0 0 0.39 0.22 2 0 NA NA NA NA 9 0 3 25.28 97.32 0.01 1 4 6 Whitelist PACA-AU 0.62 0.45 0 NA 0.59 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 6 NA NA 0 0 99 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.53 NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 7 38984420 39006998 1 1 99 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 25.28 0.01 99.76 0 2 3 Whitelist PACA-AU 0.62 0.2 NA NA 0.59 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 8 28604355 28650384 1 1 99 0 1 0 0 0 0.39 0.64 2 0 NA NA NA NA 8 5 5 25.28 29.33 67.24 0 1 2 Whitelist PACA-AU 0.62 0.85 0 NA 0.59 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 9 33570636 33612964 2 2 99 1 0 1 0 0 0.57 0.29 2 0 0 NA NA NA 6 0 3 25.28 26.46 70.96 0 3 4 Whitelist PACA-AU 0.68 0.53 0 0 0.64 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 10 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 11 NA NA 0 0 99 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.84 NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 12 NA NA 0 0 99 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.26 NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 13 26298269 27844116 3 4 99 1 1 1 0 1 0.8 0 4 0 0 4 4 4 8 8 8 25.28 26.08 73.92 0 2 3 Whitelist PACA-AU 1 0 0 0 0.84 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 14 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 15 NA NA 0 0 99 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 16 3189506 3307316 1 1 99 1 0 0 0 0 0.39 0.2 2 0 NA NA NA NA NA NA NA 25.28 0.13 99.78 0 1 2 Whitelist PACA-AU 0.62 0.42 0 NA 0.59 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 17 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 18 21973523 53559561 2 2 99 0 0 1 1 0 0.57 0.02 6 0 0 6 3 6 9 4 4 25.28 57.11 42.21 0 1 2 Whitelist PACA-AU 0.68 0.07 0 0 0.64 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 19 39535172 39806153 1 5 99 0 0 1 1 3 0.57 0 6 0 0 6 0 3 13 0 3 25.28 87.75 11.87 0 5 1 Whitelist PACA-AU 0.93 0 0 0 0.64 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 20 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 21 14583619 47124626 16 20 99 4 5 4 3 4 0.92 0 15 0 0 15 8 8 16 9 9 25.28 74.58 2.77 18 1 0 Whitelist PACA-AU 0.91 0 0 0 0.94 1 High confidence PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA With other complex events 36 0.18 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 22 41771478 45661070 3 9 99 1 1 1 0 6 0.8 0 7 0 0 7 3 4 28 3 4 25.28 91.76 8.24 6 6 1 Whitelist PACA-AU 2 0.68 0 0 0 0.84 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0217 X 136988418 147027327 5 6 99 1 1 2 1 1 0.9 0.64 5 0 0 5 3 5 7 3 3 25.28 4.33 95.44 0 1 2 Whitelist PACA-AU 0.93 0.85 0 0 0.92 1 No PACA-AU ICGC_0217 PACA 0.53 1.92 Panc-AdenoCA NA 11 0.06 nonsynonymous_SNV,17_7578529_C_A,CN:1 2 PACA-AU DO34336 ICGC_0217 female alive C25.0 70 743 743 NA Included Panc-AdenoCA PACA AU 1 24.44 PACA-AU::ICGC_0223 1 2710270 28055895 1 2 73 2 0 0 0 0 0.11 0.66 6 0.15 0 6 3 3 7 4 4 43.74 9.17 90.83 1 2 1 Whitelist PACA-AU 0.54 0.87 0.15 0 0.48 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 2 40683235 150337588 1 2 73 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 43.74 0 99.9 0 2 NA Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 3 20377858 20446159 1 1 73 1 0 0 0 0 0.39 0.36 1 0 NA NA NA NA 4 3 4 43.74 99.91 0 0 1 NA Whitelist PACA-AU 0.62 0.61 0 NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 4 91818819 91930630 2 2 73 2 0 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 43.74 99.78 0 0 1 NA Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 5 112734173 167894592 1 3 73 3 0 0 0 0 0.03 0.46 1 0 0 NA NA NA NA NA NA 43.74 0 99.87 0 2 NA Whitelist PACA-AU 0.41 0.71 0 0 0.33 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 6 67641690 67656011 1 1 73 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 43.74 99.87 0 0 1 NA Whitelist PACA-AU 0.62 0.58 NA NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 7 8324172 8404719 1 1 73 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 43.74 0 99.78 0 2 NA Whitelist PACA-AU 0.62 0.41 NA NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 8 29001342 29021993 2 2 73 0 0 1 1 0 0.57 0.42 4 0 0 4 4 4 11 5 6 43.74 26.41 73.59 0 1 2 Whitelist PACA-AU 0.68 0.67 0 0 0.64 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 9 2504421 74828124 1 3 73 1 0 2 0 0 0.3 0.21 6 0.14 0.03 6 3 6 7 4 4 43.74 89.51 10.36 0 1 2 Whitelist PACA-AU 0.62 0.44 0.15 0.03 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 10 NA NA 0 0 73 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 11 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 12 18423456 100395132 1 11 73 3 2 2 0 4 0.44 0 8 0 0 8 0 3 9 3 3 43.74 51.05 48.87 4 1 2 Whitelist PACA-AU 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 18 0.12 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 13 57077639 57091256 2 2 73 0 0 1 1 0 0.57 0.74 3 0 0 NA NA NA NA NA NA 43.74 100 0 0 3 2 Whitelist PACA-AU 0.68 0.91 0 0 0.64 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 14 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 15 75216907 75481715 1 2 73 1 0 0 1 0 0.57 0.05 1 0 0 NA NA NA NA NA NA 43.74 73.36 26.54 0 2 NA Whitelist PACA-AU 0.68 0.17 0 0 0.64 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 16 27901857 63271279 1 2 73 2 0 0 0 0 0.11 0.45 1 0.06 0 NA NA NA NA NA NA 43.74 5.93 93.97 1 2 NA Whitelist PACA-AU 0.54 0.69 0.06 0 0.48 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 17 21983438 55108966 1 3 73 1 2 0 0 0 0.3 0.45 3 0 0 NA NA NA NA NA NA 43.74 59.19 36.1 0 1 2 Whitelist PACA-AU 0.62 0.7 0 0 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 18 22380014 77209315 1 3 73 2 0 0 1 0 0.3 0 9 0 0 9 5 6 14 5 6 43.74 72.87 20.57 0 1 4 Whitelist PACA-AU 0.62 0.02 0 0 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 19 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 20 8636352 8774039 1 1 73 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 43.74 0 99.01 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 21 41166103 41191367 1 1 73 0 0 1 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 43.74 14.47 55.82 0 1 NA Whitelist PACA-AU 0.62 0.46 NA NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 22 20722613 21402372 1 1 73 0 0 1 0 0 0.39 0.58 3 NA NA NA NA NA 4 0 3 43.74 98.76 1.24 0 1 2 Whitelist PACA-AU 0.62 0.8 NA NA 0.59 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0223 X NA NA 0 0 73 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0223 PACA 0.68 1.69 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577142_T_C,CN:1 1 PACA-AU DO34288 ICGC_0223 female deceased C25.0 83 220 220 NA Included Panc-AdenoCA PACA AU 1 7.24 PACA-AU::ICGC_0224 1 19846177 211989069 1 7 76 0 4 2 1 0 0.17 0.67 18 0 0 18 5 5 19 6 8 24.52 51.32 45.69 0 3 2 Whitelist PACA-AU 0.62 0.87 0 0 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 14 0.09 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 2 160414999 160508721 1 1 76 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 24.52 0.04 99.87 0 2 3 Whitelist PACA-AU 0.62 0.44 NA NA 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 3 1859663 174646083 1 5 76 1 4 0 0 0 0.04 0.66 6 0.03 0 6 5 6 7 5 5 24.52 0.3 99.65 0 2 3 Whitelist PACA-AU 0.45 0.86 0.03 0 0.36 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 4 88328911 97115740 1 2 76 0 1 1 0 0 0.57 0.24 3 NA 0 NA NA NA NA NA NA 24.52 0.07 99.92 0 2 3 Whitelist PACA-AU 0.68 0.48 NA 0 0.64 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 5 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 6 12533639 27752273 2 2 76 0 1 0 1 0 0.57 0.81 4 0 0 4 4 4 8 6 7 24.52 92.94 3.81 0 2 3 Whitelist PACA-AU 0.68 0.95 0 0 0.64 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 7 23412956 157317118 1 2 76 0 2 0 0 0 0.11 0.44 3 NA 0 NA NA NA NA NA NA 24.52 0.44 99.34 0 2 3 Whitelist PACA-AU 0.54 0.69 NA 0 0.48 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 8 37864046 83331127 1 5 76 0 2 0 1 2 0.3 0.06 6 0 0 6 0 3 7 0 0 24.52 27.25 72.74 7 4 2 Whitelist PACA-AU 0.93 0.18 0 0 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 9 132370138 132674664 1 1 76 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 24.52 0.22 99.08 0 2 3 Whitelist PACA-AU 0.62 0.77 NA NA 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 10 NA NA 0 0 76 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 11 NA NA 0 0 76 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 12 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 13 52431967 52769501 2 2 76 0 2 0 0 0 0.11 0.75 1 NA 0 NA NA NA NA NA NA 24.52 83.07 2.78 0 3 NA Whitelist PACA-AU 0.54 0.91 NA 0 0.48 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 14 61112011 65419128 9 9 76 4 1 3 1 0 0.39 0 9 0 0 9 5 9 14 5 5 24.52 44.79 39.3 1 3 1 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA With other complex events 18 0.12 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 15 39157861 41150239 1 2 76 0 1 0 1 0 0.57 0.47 3 0 0 NA NA NA NA NA NA 24.52 0.36 84.1 0 2 3 Whitelist PACA-AU 0.68 0.71 0 0 0.64 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 16 11829963 14677338 2 2 76 1 0 1 0 0 0.57 0.46 1 0.01 0 NA NA NA NA NA NA 24.52 0 99.89 0 2 NA Whitelist PACA-AU 0.68 0.7 0.01 0 0.64 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 17 7109814 34236469 1 2 76 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 3 24.52 27.3 68.21 0 2 1 Whitelist PACA-AU 0.54 1 NA 0 0.48 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 18 19558635 27054759 5 5 76 0 2 2 1 0 0.53 0 14 0 0 14 3 7 15 3 8 24.52 93.38 1.98 24 3 5 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 19 35774283 35797984 1 1 76 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.52 0 99.83 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 20 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 22 17480241 40809394 1 1 76 0 0 0 1 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 24.52 100 0 0 1 NA Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0224 X 12318928 12361815 1 1 76 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 4 24.52 96.6 0.03 0 1 2 Whitelist PACA-AU 0.62 0.41 NA NA 0.59 0 No PACA-AU ICGC_0224 PACA 0.77 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO34616 ICGC_0224 female alive C25.0 68 666 666 NA Included Panc-AdenoCA PACA AU 1 21.91 PACA-AU::ICGC_0227 1 47163004 213013983 1 3 115 1 2 0 0 0 0.3 0.08 7 0 0 7 7 7 8 8 8 69.82 48.93 48.1 1 3 2 Whitelist PACA-AU 0.62 0.24 0 0 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 2 62969946 196050948 1 4 115 1 3 0 0 0 0.11 0.5 6 0 0 6 3 6 10 3 10 69.82 99.91 0 0 4 5 Whitelist PACA-AU 0.54 0.74 0 0 0.48 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 3 60307036 60464278 2 2 115 2 0 0 0 0 0.11 0.1 3 0 0 NA NA NA 17 7 7 69.82 99.8 0.07 0 2 3 Whitelist PACA-AU 0.54 0.26 0 0 0.48 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 4 NA NA 0 0 115 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 NA NA NA 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 5 82091739 82222029 5 5 115 2 1 1 1 0 0.9 0.7 3 0 0 NA NA NA 6 3 3 69.82 99.88 0 0 4 3 Whitelist PACA-AU 0.93 0.9 0 0 0.92 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 6 25858710 117620836 1 8 115 1 4 0 1 2 0.11 0.11 19 0 0 19 6 6 20 6 10 69.82 41.79 55.27 0 2 4 Whitelist PACA-AU 0.62 0.29 0 0 0.48 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 7 56355757 129441032 2 2 115 0 0 1 1 0 0.57 0.22 5 0 0 5 4 5 13 4 7 69.82 99.78 0 0 5 6 Whitelist PACA-AU 0.68 0.45 0 0 0.64 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 8 1615547 128465694 1 5 115 1 2 1 1 0 0.9 0.83 7 0 0 7 4 5 8 4 4 69.82 67.11 29.47 0 8 2 Whitelist PACA-AU 0.93 0.97 0 0 0.92 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 9 111746723 112042480 1 1 115 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA 4 3 3 69.82 35.63 63.67 0 3 5 Whitelist PACA-AU 0.62 0.84 NA NA 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 10 117462653 117475830 1 1 115 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 8 4 6 69.82 99.84 0 0 4 5 Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 11 7653351 66579064 1 4 115 0 4 0 0 0 0.01 0.82 6 0 0 6 6 6 7 7 7 69.82 99.44 0 0 5 7 Whitelist PACA-AU 0.21 0.96 0 0 0.16 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 12 14061884 129141268 1 4 115 2 2 0 0 0 0.26 0.5 7 0 0 7 3 5 11 3 5 69.82 99.92 0 0 5 7 Whitelist PACA-AU 0.62 0.75 0 0 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 13 NA NA 0 0 115 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 14 29304007 90714048 1 5 115 1 3 0 0 1 0.11 0.18 9 0 0 9 4 8 12 4 8 69.82 60.99 23.09 0 3 4 Whitelist PACA-AU 0.45 0.4 0 0 0.48 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 15 NA NA 0 0 115 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 16 78546335 78640275 1 1 115 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 3 3 69.82 94.71 0 0 3 4 Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 17 20836754 51657226 1 5 115 1 0 1 1 2 0.8 0.14 7 0 0 7 3 5 8 3 5 69.82 74.34 25.65 0 3 0 Whitelist PACA-AU 0.68 0.33 0 0 0.84 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 18 31482869 52607619 1 2 115 0 1 1 0 0 0.57 0.55 6 0 0 6 3 4 9 3 4 69.82 47.1 52.86 0 2 3 Whitelist PACA-AU 0.68 0.78 0 0 0.64 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 19 30083145 38050044 1 3 115 3 0 0 0 0 0.03 0 6 0 0 6 3 4 18 3 3 69.82 56.85 34.49 0 4 8 Whitelist PACA-AU 0.41 0 0 0 0.33 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 20 20857426 20956738 1 1 115 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 69.82 99.01 0 0 4 5 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 21 19574025 26808754 8 8 115 2 3 1 2 0 0.8 0 1 0 0 NA NA NA NA NA NA 69.82 10.31 67.04 0 2 NA Whitelist PACA-AU 0.87 0 0 0 0.84 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 16 0.07 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 22 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0227 X 4448467 153641837 1 3 115 1 1 0 0 1 0.57 0.29 3 NA 0.06 NA NA NA 4 4 4 69.82 3.9 95.87 1 2 3 Whitelist PACA-AU 0.62 0.54 NA 0.06 0.64 0 No PACA-AU ICGC_0227 PACA 0.37 3.51 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578407_C_G,CN:2 5 PACA-AU DO34640 ICGC_0227 female deceased C25.0 49 287 287 NA Included Panc-AdenoCA PACA AU 1 9.44 PACA-AU::ICGC_0230 1 202107525 242066921 1 2 45 1 1 0 0 0 0.57 0.78 4 0 0 4 3 4 7 3 5 65.96 84.14 12.87 0 6 4 Whitelist PACA-AU 0.68 0.93 0.01 0 0.64 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 2 186058447 237341229 1 2 45 1 1 0 0 0 0.57 0.27 4 0 0 4 3 4 7 3 3 65.96 90.38 6.94 0 4 3 Whitelist PACA-AU 0.68 0.51 0 0 0.64 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 3 NA NA 0 0 45 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 4 78628765 153376832 2 4 45 0 0 2 2 0 0.26 0.03 3 0 0 NA NA NA 7 3 7 65.96 99.81 0.09 0 3 2 Whitelist PACA-AU 0.62 0.11 0 0 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 8 0.09 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 5 NA NA 0 0 45 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 6 132625234 132740938 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 65.96 13.14 86.72 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 7 110328527 140542752 1 2 45 2 0 0 0 0 0.11 0.09 2 0 0 NA NA NA NA NA NA 65.96 99.74 0 0 3 4 Whitelist PACA-AU 0.54 0.25 0 0 0.48 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 8 87742420 89562002 1 1 45 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 65.96 96.58 0 0 3 4 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 9 21685839 106224550 1 2 45 2 0 0 0 0 0.11 0.7 2 NA 0 NA NA NA NA NA NA 65.96 1.22 98.61 0 0 2 Whitelist PACA-AU 0.54 0.89 NA 0 0.48 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 10 68178356 84361372 1 3 45 2 0 1 0 0 0.3 0.15 3 0 0 NA NA NA 5 5 5 65.96 41.64 58.17 0 2 3 Whitelist PACA-AU 0.62 0.35 0 0 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 6 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 11 98185763 98272934 1 1 45 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 65.96 99.57 0 0 3 NA Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 12 13787940 132946800 1 4 45 1 0 2 1 0 0.57 0.16 2 0.01 0 NA NA NA NA NA NA 65.96 8.32 90.92 0 1 2 Whitelist PACA-AU 0.68 0.37 0.01 0 0.64 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 8 0.09 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 13 37979319 38326571 1 1 45 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 65.96 18.74 81.26 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 14 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 16 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 17 11986455 12147536 1 1 45 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA 4 3 3 65.96 68.42 27.14 0 0 2 Whitelist PACA-AU 0.62 0.31 NA NA 0.59 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 19 NA NA 0 0 45 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 20 17236318 34538121 3 3 45 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 65.96 97.35 1.66 1 2 4 Whitelist PACA-AU 0.87 0.02 0 0 0.84 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 6 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 21 NA NA 0 0 45 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.68 NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0230 X NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0230 PACA 0.5 2.94 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 2 PACA-AU DO34504 ICGC_0230 male deceased C25.0 37 257 257 NA Included Panc-AdenoCA PACA AU 1 8.45 PACA-AU::ICGC_0296 1 170331654 229729787 1 3 115 1 0 1 0 1 0.57 0.22 1 0 0 NA NA NA NA NA NA 18.21 0.8 96.22 0 2 NA Whitelist PACA-AU 0.87 0.45 0 0 0.64 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 2 43887495 77054969 1 2 115 0 1 0 0 1 0.39 0.87 1 0 NA NA NA NA NA NA NA 18.21 0 99.89 0 2 NA Whitelist PACA-AU 0.68 1 0 NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 3 4768441 8695527 1 2 115 1 1 0 0 0 0.57 0.86 1 0.11 0 NA NA NA NA NA NA 18.21 0 99.97 0 2 NA Whitelist PACA-AU 0.68 0.99 0.11 0 0.64 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 4 2975658 92100224 1 3 115 1 1 0 0 1 0.57 1 1 0 0 NA NA NA NA NA NA 18.21 0 99.99 0 2 NA Whitelist PACA-AU 0.87 1 0 0 0.64 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 5 24169481 24874623 1 1 115 1 0 0 0 0 0.39 0.56 1 0.01 NA NA NA NA NA NA NA 18.21 0 99.86 0 2 NA Whitelist PACA-AU 0.62 0.79 0.01 NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 6 161783320 163075691 1 1 115 1 0 0 0 0 0.39 0.11 2 0 NA NA NA NA 6 4 4 18.21 14.21 82.85 0 2 4 Whitelist PACA-AU 0.62 0.29 0 NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 7 71683367 72349061 5 7 115 0 0 2 3 2 0.14 0.01 6 0 0 6 4 6 11 5 9 18.21 1.64 98.13 1 2 4 Whitelist PACA-AU 18 0.62 0.03 0 0 0.59 0 Linked to low confidence PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA Before polyploidization 12 0.05 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 8 NA NA 0 0 115 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.54 NA NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 9 NA NA 0 0 115 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.34 NA NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 10 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 11 NA NA 0 0 115 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 0 NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 12 52422056 56629773 19 19 115 8 4 3 4 0 0.38 0 3 0 0 NA NA NA 4 4 4 18.21 1.24 98.67 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 38 0.17 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 13 52378714 53034192 1 1 115 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 18.21 84.96 0.89 0 1 NA Whitelist PACA-AU 0.62 0.69 NA NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 14 91912218 92249028 1 1 115 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 18.21 0 85 0 2 NA Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 15 94553795 95511293 1 1 115 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 18.21 0 84.59 0 2 NA Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 16 52564168 79871122 1 2 115 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 18.21 1.69 98.22 0 2 NA Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 17 NA NA 0 0 115 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.63 NA NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 18 350045 21877313 9 13 115 2 1 3 3 4 0.75 0 15 0 0 15 5 11 17 5 5 18.21 81.04 14.02 0 2 3 Whitelist PACA-AU 0.68 0 0 0 0.83 0 Low confidence PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA With other complex events 22 0.1 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 19 43677351 57095301 3 4 115 1 1 0 1 1 0.8 0 6 0 0 6 6 6 10 8 8 18.21 47.02 45.71 0 2 3 Whitelist PACA-AU 1 0.01 0 0 0.84 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 20 21131122 21164195 1 1 115 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 18.21 0.05 98.98 0 1 2 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 21 NA NA 0 0 115 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.86 NA NA NA 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 22 42801318 42975374 1 1 115 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.21 0 73.07 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0296 X 7606975 121041034 1 2 115 0 2 0 0 0 0.11 1 1 0.02 0.04 NA NA NA NA NA NA 18.21 100 0 0 1 NA Whitelist PACA-AU 0.54 1 0.02 0.04 0.48 0 No PACA-AU ICGC_0296 PACA 0.54 1.83 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578536_G_T,CN:1 2 PACA-AU DO34696 ICGC_0296 male alive C25.0 75 689 689 NA Included Panc-AdenoCA PACA AU 1 22.66 PACA-AU::ICGC_0300 1 41444007 240774472 23 23 68 7 6 5 5 0 0.92 0 59 0 0 59 8 13 64 8 8 23.35 69.87 27.15 0 2 4 Whitelist PACA-AU 0.95 0 0 0 0.94 1 High confidence PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA With other complex events 46 0.34 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 2 NA NA 0 0 68 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 3 100577203 114341393 2 2 68 0 0 1 1 0 0.57 0.24 4 NA 0 4 4 4 5 5 5 23.35 0.69 99.19 0 1 2 Whitelist PACA-AU 0.68 0.48 NA 0 0.64 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 4 66252215 66691405 1 1 68 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 23.35 0.23 99.76 0 1 2 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 5 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 6 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 7 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 8 NA NA 0 0 68 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 9 20973200 32637211 2 4 68 2 0 0 0 2 0.11 0 9 0 0 9 6 8 16 6 9 23.35 76.4 21.05 0 1 3 Whitelist PACA-AU 13 0.68 0.01 0 0 0.48 1 Linked to low confidence PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA Canonical without polyploidization 6 0.04 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 10 24861582 36634121 3 5 68 2 1 0 0 2 0.3 0.13 8 0 0 8 4 6 10 5 5 23.35 25.62 70.38 0 0 1 Whitelist PACA-AU 0.62 0.33 0 0 0.59 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 8 0.06 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 11 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 12 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 13 27875998 52774140 7 10 68 1 2 2 2 3 0.93 0 12 0 0 12 5 5 16 5 6 23.35 31.59 68.41 0 4 3 Whitelist PACA-AU 9 0.68 0 0 0 0.95 1 Low confidence PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA With other complex events 17 0.12 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 14 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 16 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 17 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 18 NA NA 0 0 68 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.68 NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 19 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 20 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0300 X 12468386 72594537 1 2 68 0 1 1 0 0 0.57 1 4 0 0 4 3 4 5 4 4 23.35 61.23 38.54 1 2 1 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0300 PACA 0.56 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO34817 ICGC_0300 female alive C25.0 72 540 540 NA Included Panc-AdenoCA PACA AU 1 17.76 PACA-AU::ICGC_0301 1 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 3 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 4 36155246 176130792 1 3 27 1 0 1 1 0 0.8 0.1 6 0 0 6 3 6 7 3 3 30.63 84.49 15.23 0 1 2 Whitelist PACA-AU 0.87 0.27 0 0 0.84 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 6 0.11 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 5 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 6 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 7 69965379 70065882 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 30.63 0.06 99.71 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 13 102725372 110257554 1 2 27 0 0 0 1 1 0.39 0.06 3 NA NA NA NA NA 4 4 4 30.63 9.57 90.43 0 4 2 Whitelist PACA-AU 0.68 0.2 NA NA 0.59 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 3 0.06 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 14 103886509 103897395 1 1 27 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 30.63 0.06 99.02 0 2 NA Whitelist PACA-AU 0.62 0.8 NA NA 0.59 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 18 25572442 75675714 15 16 27 4 4 4 3 1 0.98 0 18 0 0 18 4 4 22 4 6 30.63 95.35 0 0 1 3 Whitelist PACA-AU 0.95 0 0 0 0.99 0 Low confidence PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA With other complex events 31 0.57 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0301 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0301 PACA 0.61 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 2 PACA-AU DO34720 ICGC_0301 male alive C25.0 68 555 555 NA Included Panc-AdenoCA PACA AU 1 18.26 PACA-AU::ICGC_0303 1 109159140 230863766 1 6 132 1 1 0 0 4 0.57 0.42 6 0 0 6 6 6 9 7 7 30.07 66.83 33.16 0 2 3 Whitelist PACA-AU 0.93 0.66 0 0 0.64 1 Linked to low confidence PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA Canonical without polyploidization 8 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 2 10700671 144337304 7 14 132 3 3 1 0 7 0.28 0 18 0 0 18 4 6 20 4 6 30.07 14.78 85.12 8 2 3 Whitelist PACA-AU 1 0.62 0 0 0 0.59 1 Low confidence PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA With other complex events 21 0.08 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 3 89675216 140514916 1 2 132 2 0 0 0 0 0.11 0.5 2 0 0 NA NA NA 8 3 3 30.07 33.6 63.23 0 2 4 Whitelist PACA-AU 0.54 0.74 0 0 0.48 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 4 NA NA 0 0 132 0 0 0 0 0 NA 0.22 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.45 0 NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 5 66956842 171368822 1 2 132 2 0 0 0 0 0.11 0.07 2 0 0 NA NA NA NA NA NA 30.07 20.87 79.01 0 1 2 Whitelist PACA-AU 0.54 0.21 0 0 0.48 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 6 35082001 106416087 1 4 132 2 0 0 0 2 0.11 0.36 2 0 0 NA NA NA NA NA NA 30.07 43.78 56.07 0 1 2 Whitelist PACA-AU 10 0.54 0.61 0 0 0.48 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 7 38351000 127662281 1 2 132 2 0 0 0 0 0.11 0.7 2 0 0 NA NA NA 5 3 3 30.07 0.04 99.73 2 1 2 Whitelist PACA-AU 0.54 0.89 0 0 0.48 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 8 77164467 111871298 4 4 132 0 1 1 2 0 0.57 0 4 0 0 4 3 4 8 3 3 30.07 64.96 34.99 0 3 2 Whitelist PACA-AU 0.68 0.02 0 0 0.64 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 9 9744911 120669683 1 4 132 3 0 0 0 1 0.03 0.65 8 0.01 0 8 6 8 10 8 8 30.07 28.85 70.44 0 1 2 Whitelist PACA-AU 0.54 0.86 0.01 0 0.33 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 10 128299997 131920699 3 5 132 0 0 2 1 2 0.3 0.06 5 0 0 5 5 5 8 8 8 30.07 21.53 78.29 1 1 2 Whitelist PACA-AU 0.68 0.18 0 0 0.59 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 11 113197874 113225992 1 1 132 1 0 0 0 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 30.07 0.07 99.37 0 2 NA Whitelist PACA-AU 0.62 0.54 0 NA 0.59 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 12 NA NA 0 0 132 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.54 NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 13 NA NA 0 0 132 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 14 NA NA 0 0 132 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.95 NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 15 NA NA 0 0 132 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 0 NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 16 NA NA 0 0 132 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.52 NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 17 28715899 50792664 9 9 132 3 0 3 3 0 0.39 0 14 0 0 14 14 14 22 15 18 30.07 64.19 31.26 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA Canonical without polyploidization 18 0.07 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 18 21980756 34828662 1 1 132 0 0 1 0 0 0.39 0.27 3 NA NA NA NA NA 7 6 6 30.07 71.8 22.39 0 1 2 Whitelist PACA-AU 0.62 0.52 NA NA 0.59 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 19 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 20 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 21 NA NA 0 0 132 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 22 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0303 X 33892059 116208127 1 3 132 3 0 0 0 0 0.03 0.84 4 0 0 4 4 4 6 6 6 30.07 13.65 86.12 0 1 2 Whitelist PACA-AU 0.41 0.98 0 0 0.33 1 No PACA-AU ICGC_0303 PACA 0.58 1.9 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:1 1 PACA-AU DO34736 ICGC_0303 female deceased C25.0 78 203 203 NA Included Panc-AdenoCA PACA AU 1 6.68 PACA-AU::ICGC_0304 1 18189904 50709590 1 3 55 1 2 0 0 0 0.3 1 1 0 0 NA NA NA NA NA NA 12.54 42.41 57.59 0 2 NA Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 6 0.05 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 2 96791791 236783566 1 3 55 3 0 0 0 0 0.03 0.63 3 0 0 NA NA NA NA NA NA 12.54 0.22 99.68 0 2 1 Whitelist PACA-AU 0.41 0.84 0 0 0.33 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 6 0.05 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 3 30505569 117044697 1 2 55 2 0 0 0 0 0.11 0.44 1 NA 0 NA NA NA NA NA NA 12.54 0 99.95 0 2 NA Whitelist PACA-AU 0.54 0.69 NA 0 0.48 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 4 47091289 49183457 1 6 55 1 1 2 1 1 0.9 0.1 4 0 0 4 4 4 5 5 5 12.54 0.5 97.13 0 1 2 Whitelist PACA-AU 0.93 0.26 0 0 0.92 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 11 0.1 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 5 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 6 23096161 170898153 1 2 55 2 0 0 0 0 0.11 0.77 3 NA 0 NA NA NA 5 5 5 12.54 10.73 89.01 0 1 2 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 7 77129031 77366456 1 1 55 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 3 3 12.54 5.17 94.6 0 1 2 Whitelist PACA-AU 0.62 0.93 NA NA 0.59 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 8 122443810 123263812 1 1 55 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 12.54 0.56 99.43 0 1 2 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 9 21235886 21993344 5 5 55 0 1 2 2 0 0.53 0.01 7 0 0 7 7 7 8 7 7 12.54 23.36 75.96 0 1 0 Whitelist PACA-AU 0.68 0.03 0 0 0.64 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 10 0.09 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 11 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 12 49125815 49463457 2 2 55 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 12.54 0 99.92 0 2 NA Whitelist PACA-AU 0.68 1 NA 0 0.64 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 4 0.04 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 13 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 14 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 16 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 18 1490133 31586695 12 12 55 2 3 3 4 0 0.88 0 17 0 0 17 5 5 20 5 5 12.54 69.19 26.17 0 1 2 Whitelist PACA-AU 0.93 0 0 0 0.91 0 Low confidence PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA With other complex events 24 0.22 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 19 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 20 689596 708366 1 1 55 0 0 0 1 0 0.39 0.12 2 NA NA NA NA NA 4 3 3 12.54 1.16 97.85 0 2 3 Whitelist PACA-AU 0.62 0.3 NA NA 0.59 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 2 0.02 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0304 X 33471673 149907501 2 4 55 1 0 1 2 0 0.57 0.06 7 0 0 7 7 7 7 7 7 12.54 0.64 99.14 2 2 1 Whitelist PACA-AU 0.68 0.18 0 0 0.64 0 No PACA-AU ICGC_0304 PACA 0.67 1.96 Panc-AdenoCA NA 8 0.07 NA 2 PACA-AU DO34785 ICGC_0304 female alive C25.0 67 721 721 NA Included Panc-AdenoCA PACA AU 1 23.72 PACA-AU::ICGC_0309 1 45226136 94556518 2 2 316 0 0 1 1 0 0.57 0.09 1 0 0 NA NA NA 19 4 4 22.83 39.91 60.09 0 2 NA Whitelist PACA-AU 0.68 0.26 0 0 0.64 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 2 46213841 84808069 3 3 316 0 1 1 1 0 0.8 0.22 10 0 0 10 5 10 17 6 6 22.83 16 83.9 0 3 2 Whitelist PACA-AU 0.87 0.45 0 0 0.84 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 6 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 3 59964279 60334311 2 2 316 2 0 0 0 0 0.11 0.12 8 0 0 8 4 8 20 6 8 22.83 6.58 93.29 0 2 3 Whitelist PACA-AU 0.54 0.31 0 0 0.48 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 4 2366755 91955374 1 8 316 4 1 0 1 2 0.11 0.01 9 0 0 9 4 9 11 4 4 22.83 0.61 99.38 1 2 1 Whitelist PACA-AU 0.54 0.04 0 0 0.48 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 14 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 5 51722127 52044030 2 3 316 1 1 0 0 1 0.57 0.91 1 0 0 NA NA NA 7 7 7 22.83 10.75 89.13 0 2 NA Whitelist PACA-AU 0.62 1 0 0 0.64 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 5 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 6 1305135 2049476 2 2 316 2 0 0 0 0 0.11 0.81 4 0 0 4 3 4 25 15 15 22.83 2.34 97.52 0 1 0 Whitelist PACA-AU 0.54 0.96 0 0 0.48 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 7 22107694 157898805 1 12 316 4 4 1 0 3 0.13 0.71 16 0 0 16 3 7 17 3 3 22.83 41.78 58 0 3 1 Whitelist PACA-AU 0.83 0.9 0 0 0.55 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 21 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 8 128167411 128704301 4 4 316 1 1 1 1 0 1 0.03 8 0 0 8 0 3 18 8 8 22.83 29.1 67.48 0 2 39 Whitelist PACA-AU 1 0.11 0 0 1 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 8 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 9 88580734 89041883 7 18 316 1 2 3 1 11 0.67 0 1 0 0 NA NA NA 7 4 4 22.83 0.45 98.85 0 2 NA Whitelist PACA-AU 0.68 0 0 0 0.74 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 25 0.04 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 10 21895573 124966632 1 9 316 1 4 0 0 4 0.04 0.18 2 0 0 NA NA NA NA NA NA 22.83 0.06 99.83 2 1 2 Whitelist PACA-AU 0.68 0.39 0 0 0.36 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 14 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 11 27863113 68279875 1 10 316 2 3 2 0 3 0.44 0 20 0 0 20 7 7 25 7 7 22.83 34.93 64.51 0 2 3 Whitelist PACA-AU 0.96 0 0 0 0.64 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 17 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 12 94018073 95962141 2 2 316 0 0 1 1 0 0.57 0.08 3 0 0 NA NA NA 6 4 4 22.83 57.02 42.9 0 1 2 Whitelist PACA-AU 0.68 0.23 0 0 0.64 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 13 73304898 74077537 2 2 316 0 2 0 0 0 0.11 0.03 2 0 0 NA NA NA NA NA NA 22.83 99.42 0.58 0 1 2 Whitelist PACA-AU 0.54 0.11 0 0 0.48 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 14 24868400 96868769 1 6 316 1 5 0 0 0 0.01 0.26 10 0 0 10 10 10 11 11 11 22.83 93.21 5.88 0 1 2 Whitelist PACA-AU 0.25 0.5 0 0 0.19 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 12 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 15 40301788 75275411 1 20 316 2 3 1 2 12 0.8 0 3 0 0 NA NA NA NA NA NA 22.83 0.16 99.75 0 2 3 Whitelist PACA-AU 1 0 0 0 0.84 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 28 0.04 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 16 21564901 86055220 1 8 316 0 1 2 1 4 0.57 0.08 7 0 0 7 5 7 7 5 5 22.83 25.24 74.28 0 2 1 Whitelist PACA-AU X 0.87 0.22 0 0 0.64 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 12 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 17 11452623 18528683 3 5 316 0 1 1 1 2 0.8 0 6 0 0 6 4 6 15 5 5 22.83 56.28 43.68 0 2 3 Whitelist PACA-AU 0.68 0.01 0 0 0.84 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 8 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 18 29502707 60138517 1 5 316 0 3 0 0 2 0.03 1 5 0 0 5 3 3 6 4 4 22.83 0.27 99.7 2 2 3 Whitelist PACA-AU 0.45 1 0 0 0.33 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 8 0.01 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 19 31330156 32977825 5 11 316 1 1 1 2 6 0.9 0 9 0 0 9 3 4 34 4 4 22.83 25.7 74.12 2 51 31 Whitelist PACA-AU 0.62 0 0 0 0.92 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 16 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 20 14757005 57042755 1 13 316 3 2 0 0 8 0.14 0.03 7 0 0 7 3 5 7 3 5 22.83 0.97 90.57 0 2 1 Whitelist PACA-AU 16_X 0.9 0.11 0 0 0.59 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 18 0.03 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 21 36207000 46685702 1 8 316 2 2 0 0 4 0.26 0.06 9 0 0 9 9 9 9 9 9 22.83 0.98 76.37 0 2 3 Whitelist PACA-AU 2 0.87 0.19 0 0 0.59 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 12 0.02 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 22 30457692 30534363 1 1 316 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 22.83 2.76 97.24 0 2 NA Whitelist PACA-AU 0.62 1 0 NA 0.59 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0309 X 3548141 149162622 1 17 316 3 3 0 0 11 0.11 0.44 10 0 0 10 7 10 11 7 7 22.83 3.69 96.08 0 2 3 Whitelist PACA-AU 16_17 0.68 0.69 0 0 0.48 0 No PACA-AU ICGC_0309 PACA 0.71 1.99 Panc-AdenoCA NA 23 0.04 frameshift_deletion,17_7577558_-_G,CN:2 1 PACA-AU DO34809 ICGC_0309 female deceased C25.0 74 297 297 NA Included Panc-AdenoCA PACA AU 1 9.77 PACA-AU::ICGC_0312 1 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 2 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 3 83041198 83119866 1 1 57 1 0 0 0 0 0.39 0.6 1 0 NA NA NA NA 4 0 3 26.18 0.23 99.72 0 2 NA Whitelist PACA-AU 0.62 0.81 0 NA 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 4 131767916 137052049 1 3 57 3 0 0 0 0 0.03 0.79 2 0 0 NA NA NA NA NA NA 26.18 2.76 97.21 1 1 2 Whitelist PACA-AU 0.41 0.94 0 0 0.33 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 5 108022321 151108835 5 6 57 1 0 2 2 1 0.53 0 3 0 0 NA NA NA 9 4 4 26.18 67.83 29.49 0 1 2 Whitelist PACA-AU 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 11 0.1 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 6 67314378 68348318 1 1 57 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 26.18 0 99.85 0 2 NA Whitelist PACA-AU 0.62 0.5 NA NA 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 7 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 8 NA NA 0 0 57 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.1 0 NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 9 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 10 111923589 132074584 2 3 57 0 1 0 1 1 0.57 0.19 5 0 0 5 5 5 10 10 10 26.18 38.16 58.49 0 2 1 Whitelist PACA-AU 0.87 0.41 0 0 0.64 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 11 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 12 56885576 62840355 3 4 57 1 2 0 0 1 0.3 0.34 6 0 0 6 6 6 7 6 7 26.18 55.9 44.09 0 2 3 Whitelist PACA-AU 0.68 0.59 0 0 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 13 30928002 30969764 2 2 57 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 5 3 3 26.18 100 0 0 1 NA Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 14 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 15 25628004 26284496 1 1 57 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 26.18 75.82 24.18 0 1 NA Whitelist PACA-AU 0.62 0.88 NA NA 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 16 2036889 2318275 1 1 57 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.18 0 99.91 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 17 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 18 31975555 46690479 2 3 57 1 0 0 1 1 0.57 0 5 0 0 5 0 3 16 5 5 26.18 24.79 70.56 0 1 2 Whitelist PACA-AU 0.87 0 0 0 0.64 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0312 X 86763791 91807599 1 1 57 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 26.18 100 0 0 1 NA Whitelist PACA-AU 0.62 0.62 NA NA 0.59 0 No PACA-AU ICGC_0312 PACA 0.54 1.85 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-AU DO34793 ICGC_0312 male deceased C25.0 56 427 427 NA Included Panc-AdenoCA PACA AU 1 14.05 PACA-AU::ICGC_0313 1 189423365 236063825 18 18 38 3 2 7 6 0 0.29 0 22 0 0 22 16 22 23 17 17 68.59 98.92 1.07 8 3 2 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA Canonical without polyploidization 36 0.47 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 2 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 3 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 4 NA NA 0 0 38 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 5 176379792 176469251 1 1 38 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 68.59 99.86 0 0 4 5 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 6 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 8 33190719 41375640 2 3 38 1 0 0 1 1 0.57 0.13 5 0 0 5 0 4 7 3 3 68.59 76.68 23.21 8 4 6 Whitelist PACA-AU 0.87 0.32 0 0 0.64 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 5 0.07 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 9 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 10 8920437 9025830 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 68.59 0.08 99.73 0 0 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 11 1317445 65183476 1 2 38 1 0 1 0 0 0.57 0.26 5 0 0.05 5 3 5 8 4 4 68.59 46.07 53.5 0 2 4 Whitelist PACA-AU 0.68 0.5 0 0.05 0.64 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 12 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 13 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 15 NA NA 0 0 38 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.53 NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 16 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 17 17694231 18618204 1 1 38 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 8 7 7 68.59 81.33 18.67 0 3 4 Whitelist PACA-AU 0.62 0.08 NA NA 0.59 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 18 15221528 36945366 1 2 38 2 0 0 0 0 0.11 0.27 4 NA 0 4 4 4 5 4 4 68.59 47.68 52.3 0 4 6 Whitelist PACA-AU 0.54 0.51 NA 0 0.48 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 19 44304837 49227164 1 1 38 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 68.59 99.83 0 0 3 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 20 NA NA 0 0 38 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 22 33812909 34227555 1 1 38 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 68.59 0.81 99.19 0 1 2 Whitelist PACA-AU 0.62 0.62 NA NA 0.59 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0313 X NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0313 PACA 0.28 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578205_T_C,CN:2 2 PACA-AU DO34728 ICGC_0313 female alive C25.0 77 508 508 NA Included Panc-AdenoCA PACA AU 1 16.71 PACA-AU::ICGC_0315 1 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 2 149429710 149536925 1 1 74 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 76.8 99.91 0 0 4 NA Whitelist PACA-AU 0.62 0.08 NA NA 0.59 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 3 29669446 83596447 2 4 74 3 0 1 0 0 0.11 1 5 0 0 5 3 5 5 3 3 76.8 72.7 27.16 0 2 4 Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 4 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 5 NA NA 0 0 74 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 6 48154923 50337636 1 5 74 0 1 0 0 4 0.39 0.09 4 0 0 4 4 4 8 5 6 76.8 0.8 95.96 0 2 4 Whitelist PACA-AU 0.62 0.24 0 0 0.59 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 7 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 8 108033201 108061211 1 3 74 0 0 1 1 1 0.57 0.28 2 0 0 NA NA NA 4 3 4 76.8 99.97 0.02 0 2 6 Whitelist PACA-AU 0.87 0.52 0 0 0.64 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 9 9362123 9509738 1 2 74 2 0 0 0 0 0.11 0.54 1 0.3 0 NA NA NA 4 3 3 76.8 44.05 52.87 0 1 NA Whitelist PACA-AU 0.54 0.77 0.3 0 0.48 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 10 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 11 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 12 NA NA 0 0 74 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.51 NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 13 39127645 94968366 1 2 74 2 0 0 0 0 0.11 0.74 4 0 0 4 4 4 6 5 6 76.8 99.11 0.89 0 1 3 Whitelist PACA-AU 0.54 0.91 0 0 0.48 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 14 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 15 25948532 26062126 1 1 74 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 76.8 25.42 74.58 0 2 4 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 16 2644933 2665434 1 1 74 0 0 1 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 76.8 99.41 0.27 0 4 NA Whitelist PACA-AU 0.62 0.7 NA NA 0.59 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 17 19849474 73492592 12 12 74 1 5 2 4 0 0.34 0 32 0 0 32 3 6 41 3 6 76.8 62.65 32.9 0 5 10 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 24 0.16 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 18 31007027 32036238 3 3 74 1 0 1 1 0 0.8 0 6 0 0 6 5 6 17 5 5 76.8 58.32 41.67 0 12 10 Whitelist PACA-AU 0.87 0 0 0 0.84 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 19 NA NA 0 0 74 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.18 NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 20 NA NA 0 0 74 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.88 NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 21 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 22 20232955 21018965 1 3 74 0 0 1 1 1 0.57 0 8 0 0 8 0 4 12 0 3 76.8 100 0 0 7 8 Whitelist PACA-AU 0.62 0 0 0 0.64 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0315 X NA NA 0 0 74 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 0 No PACA-AU ICGC_0315 PACA 0.36 3.45 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578445_T_A,CN:2 4 PACA-AU DO34312 ICGC_0315 female deceased C25.0 58 226 226 NA Included Panc-AdenoCA PACA AU 1 7.43 PACA-AU::ICGC_0321 1 163563530 230421612 2 8 125 0 0 1 1 6 0.57 0.01 1 0 0 NA NA NA 8 3 3 39.69 33.71 66.29 0 2 NA Whitelist PACA-AU 0.68 0.05 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 10 0.04 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 2 175290057 201119119 1 2 125 1 1 0 0 0 0.57 0.87 4 0 0 4 3 4 7 4 4 39.69 33.4 66.49 1 2 1 Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 3 52584599 153829375 1 5 125 2 0 0 0 3 0.11 0.38 3 0 0 NA NA NA 4 3 3 39.69 57.15 42.8 0 1 2 Whitelist PACA-AU 0.93 0.63 0 0 0.48 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 7 0.03 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 4 118426716 118437935 2 2 125 0 0 1 1 0 0.57 0.59 1 0 0 NA NA NA 6 5 5 39.69 45.69 54.31 0 1 NA Whitelist PACA-AU 0.68 0.81 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 5 28618403 133105732 1 3 125 2 0 0 1 0 0.3 0.71 4 0 0 4 3 4 6 4 4 39.69 56.75 40.22 0 2 1 Whitelist PACA-AU 0.62 0.9 0 0 0.59 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 6 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 6 1213292 53150700 2 3 125 0 1 0 1 1 0.57 0.26 3 0.09 0.01 NA NA NA 4 4 4 39.69 73.78 26.08 0 1 2 Whitelist PACA-AU 0.87 0.5 0.09 0.01 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 5 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 7 14001712 40849388 1 2 125 1 1 0 0 0 0.57 0.69 4 0 0 4 3 4 6 3 3 39.69 18.31 81.45 0 2 1 Whitelist PACA-AU 0.68 0.89 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 8 85673454 102124914 2 2 125 0 0 1 1 0 0.57 0.07 3 0 0 NA NA NA 7 4 4 39.69 33.93 66.07 0 2 1 Whitelist PACA-AU 0.68 0.2 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 9 103551896 103563035 1 1 125 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 7 5 5 39.69 31.32 68.54 0 1 2 Whitelist PACA-AU 0.62 0.37 0 NA 0.59 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 10 64497769 110948248 4 4 125 1 2 0 1 0 0.57 0.02 4 0 0 4 3 4 7 5 5 39.69 30.26 69.56 0 2 1 Whitelist PACA-AU 0.68 0.07 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 8 0.03 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 11 123594949 123716434 1 1 125 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 39.69 2.1 97.34 0 2 NA Whitelist PACA-AU 0.62 0.54 NA NA 0.59 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 12 NA NA 0 0 125 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.12 NA NA NA 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 13 89297620 105189340 2 2 125 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 39.69 100 0 0 1 NA Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 14 NA NA 0 0 125 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 15 61567499 62799033 2 2 125 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 39.69 40.56 59.29 0 3 NA Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 16 47950801 67307989 1 2 125 2 0 0 0 0 0.11 1 2 0 0 NA NA NA NA NA NA 39.69 0.07 99.83 0 1 2 Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 17 27127351 62755220 1 4 125 0 2 0 0 2 0.11 0.09 4 0 0 4 4 4 6 5 5 39.69 27.51 68.01 0 2 3 Whitelist PACA-AU 0.68 0.24 0 0 0.48 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 6 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 18 56424410 56438728 1 1 125 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA 5 3 3 39.69 88.17 7.18 0 1 NA Whitelist PACA-AU 0.62 0.8 NA NA 0.59 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 19 42621939 42843509 1 1 125 0 1 0 0 0 0.39 0.32 2 0 NA NA NA NA 4 4 4 39.69 7.57 92.25 0 2 3 Whitelist PACA-AU 0.62 0.57 0 NA 0.59 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 20 NA NA 0 0 125 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 21 NA NA 0 0 125 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.87 NA NA NA 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 22 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0321 X 47684349 138634936 2 2 125 0 0 1 1 0 0.57 0.68 1 0.02 0 NA NA NA NA NA NA 39.69 100 0 0 1 NA Whitelist PACA-AU 0.68 0.88 0.02 0 0.64 0 No PACA-AU ICGC_0321 PACA 0.55 1.73 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO34905 ICGC_0321 male alive C25.0 64 1142 1142 NA Included Panc-AdenoCA PACA AU 1 37.57 PACA-AU::ICGC_0326 1 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 2 NA NA 0 0 108 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 3 114104561 175415199 1 2 108 2 0 0 0 0 0.11 0.04 4 NA 0 4 4 4 5 5 5 59.87 99.55 0.4 0 2 3 Whitelist PACA-AU 0.54 0.13 NA 0 0.48 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 4 0.02 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 4 NA NA 0 0 108 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 5 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 6 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 7 69907547 69964699 1 1 108 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 59.87 99.78 0 0 3 NA Whitelist PACA-AU 0.62 0.12 NA NA 0.59 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 2 0.01 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 8 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 9 27608631 34592303 3 3 108 2 1 0 0 0 0.3 0.32 4 0 0 4 3 4 9 3 3 59.87 8.94 90.37 0 1 0 Whitelist PACA-AU 0.62 0.57 0 0 0.59 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 6 0.03 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 10 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 11 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 12 73647749 128290868 24 26 108 6 6 4 8 2 0.72 0 14 0 0 14 7 7 16 7 7 59.87 62.89 36.28 5 2 4 Whitelist PACA-AU 0.92 0 0 0 0.8 1 High confidence PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA With other complex events 50 0.23 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 13 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 14 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 15 NA NA 0 0 108 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 16 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 17 79047867 79241383 5 7 108 2 2 1 0 2 0.53 0 3 0 0 NA NA NA NA NA NA 59.87 0.08 99.91 0 2 0 Whitelist PACA-AU 0.62 0.01 0 0 0.64 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 12 0.06 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 18 20681108 75019000 41 47 108 10 9 11 11 6 0.97 0 24 0 0 24 17 24 24 17 24 59.87 99.93 0.01 13 1 3 Whitelist PACA-AU 0.87 0 0 0 0.98 1 High confidence PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA Canonical without polyploidization 88 0.41 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 19 NA NA 0 0 108 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.37 0 NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 20 20482581 23099477 2 2 108 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 7 4 4 59.87 69.75 29.28 0 4 5 Whitelist PACA-AU 0.68 0.01 0 0 0.64 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 4 0.02 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 21 16418264 41460083 1 4 108 0 2 1 1 0 0.57 0.04 5 0 0 5 3 5 5 3 3 59.87 22.08 47.91 0 1 2 Whitelist PACA-AU 0.68 0.15 0 0 0.64 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 8 0.04 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 22 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0326 X NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0326 PACA 0.44 2.52 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO34849 ICGC_0326 female deceased C25.0 86 272 272 NA Included Panc-AdenoCA PACA AU 1 8.95 PACA-AU::ICGC_0354 1 190062149 190074962 1 1 25 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 82.03 96.98 0 0 5 NA Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 2 142091842 145852332 3 4 25 2 1 0 0 1 0.3 0 4 0 0 4 4 4 7 7 7 82.03 99.89 0 0 4 6 Whitelist PACA-AU 0.54 0.02 0 0 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 7 0.14 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 4 NA NA 0 0 25 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.88 NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 6 31011044 31120875 1 1 25 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 4 4 4 82.03 99.82 0 0 1 4 Whitelist PACA-AU 0.62 0.87 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 8 88312361 88377579 1 1 25 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 4 82.03 99.99 0 1 4 5 Whitelist PACA-AU 0.62 0.32 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 9 21099322 120098497 1 2 25 1 1 0 0 0 0.57 0.26 6 NA 0 6 3 4 7 3 5 82.03 12.02 85.43 0 2 0 Whitelist PACA-AU 0.68 0.5 NA 0 0.64 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 4 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 12 41679394 128027920 1 1 25 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 7 3 4 82.03 96.31 0 0 3 5 Whitelist PACA-AU 0.62 0.58 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 14 84218029 86122161 1 1 25 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA 4 3 3 82.03 94.52 1.77 0 2 4 Whitelist PACA-AU 0.62 0.78 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 16 78487423 78616104 1 1 25 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 82.03 99.81 0.14 0 2 4 Whitelist PACA-AU 0.62 0.74 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 17 57187963 57221062 1 1 25 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 82.03 68.22 27.34 0 5 NA Whitelist PACA-AU 0.62 0.74 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 18 5225766 66808926 2 3 25 0 1 0 1 1 0.57 0 2 0 0.01 NA NA NA NA NA NA 82.03 26.88 73.07 0 2 4 Whitelist PACA-AU 0.87 0 0 0.01 0.64 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 5 0.1 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 19 11212436 11229485 1 1 25 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 82.03 92.69 7.13 0 4 NA Whitelist PACA-AU 0.62 0.24 NA NA 0.59 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0354 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0354 PACA 0.56 4.01 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-AU DO49074 ICGC_0354 male deceased C25.0 49 168 168 NA Included Panc-AdenoCA PACA AU 1 5.53 PACA-AU::ICGC_0365 1 172000555 245340022 1 3 78 0 3 0 0 0 0.03 0.83 3 0 0 NA NA NA 5 3 3 28.7 56.73 43.27 0 3 4 Whitelist PACA-AU 0.41 0.97 0 0 0.33 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 6 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 2 50491717 52785967 1 2 78 1 0 1 0 0 0.57 0.41 1 0 0 NA NA NA NA NA NA 28.7 0 99.9 0 2 NA Whitelist PACA-AU 0.68 0.66 0 0 0.64 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 3 26274228 26528411 1 1 78 1 0 0 0 0 0.39 0.66 2 0 NA NA NA NA 5 5 5 28.7 18.54 78.4 1 1 2 Whitelist PACA-AU 0.62 0.87 0 NA 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 4 70171252 172166611 1 4 78 0 3 0 0 1 0.03 0.04 2 0 0 NA NA NA 6 0 0 28.7 48.6 51.3 0 2 3 Whitelist PACA-AU 0.54 0.14 0 0 0.33 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 7 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 5 61560811 61581924 1 1 78 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA 7 3 3 28.7 0.07 99.79 0 2 3 Whitelist PACA-AU 0.62 0.48 NA NA 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 6 14585873 166752983 1 3 78 0 3 0 0 0 0.03 0.63 5 0 0 5 5 5 5 5 5 28.7 0.02 99.81 0 2 3 Whitelist PACA-AU 0.41 0.84 0 0 0.33 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 6 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 7 71376020 110531778 1 2 78 1 1 0 0 0 0.57 0.8 1 0 0 NA NA NA NA NA NA 28.7 0 99.78 0 2 NA Whitelist PACA-AU 0.68 0.95 0 0 0.64 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 8 18762025 80882717 1 3 78 2 1 0 0 0 0.3 1 5 0 0 5 4 5 9 8 9 28.7 27.82 72.07 0 1 3 Whitelist PACA-AU 0.62 1 0 0 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 6 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 9 115421549 128809846 1 2 78 0 2 0 0 0 0.11 0.01 4 0 0 4 4 4 13 5 5 28.7 40.13 57.43 0 2 3 Whitelist PACA-AU 0.54 0.05 0 0 0.48 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 10 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 11 85212680 109823576 1 2 78 0 2 0 0 0 0.11 0.41 1 0 0 NA NA NA NA NA NA 28.7 0 99.57 0 2 NA Whitelist PACA-AU 0.54 0.66 0 0 0.48 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 12 124543004 124565085 2 2 78 0 0 1 1 0 0.57 0.03 3 0 0 NA NA NA 4 3 3 28.7 34.76 65.16 0 2 3 Whitelist PACA-AU 0.68 0.11 0 0 0.64 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 13 21968280 81922893 1 3 78 0 1 1 1 0 0.8 0.2 3 0 0 NA NA NA NA NA NA 28.7 100 0 0 3 4 Whitelist PACA-AU 0.87 0.42 0 0 0.84 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 6 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 14 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 15 77318708 77332601 1 1 78 0 1 0 0 0 0.39 0.17 2 0 NA NA NA NA 8 6 7 28.7 78.3 16.93 0 1 2 Whitelist PACA-AU 0.62 0.39 0 NA 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 16 62469577 62487976 1 1 78 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 28.7 0.02 99.86 0 2 4 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 17 30176277 62784114 1 2 78 0 1 0 1 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 28.7 0 100 0 2 NA Whitelist PACA-AU 0.68 0.72 0 0 0.64 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 4 0.03 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 18 19302998 68074886 1 4 78 0 3 0 1 0 0.11 0 7 0 0 7 6 7 8 6 6 28.7 72.72 22.24 0 1 2 Whitelist PACA-AU 0.54 0.03 0 0 0.48 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 8 0.05 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 19 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 20 19930284 57977294 1 3 78 0 2 0 1 0 0.3 0.09 4 0 0 4 4 4 4 4 4 28.7 36.47 56.41 0 1 2 Whitelist PACA-AU 0.62 0.25 0 0 0.59 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 6 0.04 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 22 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0365 X NA NA 0 0 78 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.41 NA NA NA 0 No PACA-AU ICGC_0365 PACA 0.45 1.89 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49129 ICGC_0365 male alive C25.0 50 337 337 NA Included Panc-AdenoCA PACA AU 1 11.09 PACA-AU::ICGC_0391 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 2 51983397 51996811 1 1 7 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 66.29 99.9 0 0 4 NA Whitelist PACA-AU 0.62 0.7 NA NA 0.59 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 2 0.14 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 5 49823428 49950762 1 1 7 0 0 0 1 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 66.29 99.86 0 0 3 NA Whitelist PACA-AU 0.62 0.62 NA NA 0.59 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 2 0.14 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 8 81693990 103434159 1 2 7 0 0 1 1 0 0.57 0.05 2 NA 0 NA NA NA NA NA NA 66.29 85.43 14.56 0 2 4 Whitelist PACA-AU 0.68 0.15 NA 0 0.64 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 4 0.29 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 10 43610450 61595122 2 2 7 0 0 1 1 0 0.57 0.04 1 NA 0 NA NA NA NA NA NA 66.29 99.82 0 0 3 NA Whitelist PACA-AU 0.68 0.13 NA 0 0.64 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 4 0.29 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 11 129817783 129828185 1 1 7 1 0 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 66.29 99.57 0 0 4 NA Whitelist PACA-AU 0.62 0.53 NA NA 0.59 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 2 0.14 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0391 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0391 PACA 0.42 3.06 Panc-AdenoCA NA 0 0 NA 4 PACA-AU DO49076 ICGC_0391 male deceased C25.0 64 480 480 NA Included Panc-AdenoCA PACA AU 1 15.79 PACA-AU::ICGC_0392 1 95238505 245033698 1 5 205 2 1 0 0 2 0.3 0 4 0 0 4 3 4 5 3 3 34.32 0.33 99.67 0 2 1 Whitelist PACA-AU 0.68 0.01 0 0 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 2 68630381 198418099 1 2 205 0 1 1 0 0 0.57 0 2 NA 0 NA NA NA NA NA NA 34.32 0.46 99.44 0 2 3 Whitelist PACA-AU 0.68 0 NA 0 0.64 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 3 87467617 87483565 1 2 205 1 0 0 0 1 0.39 0.01 2 0 NA NA NA NA 5 0 3 34.32 44.14 55.83 0 2 4 Whitelist PACA-AU 0.68 0.03 0 NA 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 4 10524509 128462895 1 6 205 2 2 0 1 1 0.53 0.4 6 0 0 6 5 6 9 5 6 34.32 0.97 99.01 11 2 3 Whitelist PACA-AU 0.68 0.65 0 0 0.64 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 5 109806124 176837688 1 3 205 0 3 0 0 0 0.03 0 3 0 0 NA NA NA NA NA NA 34.32 0.24 99.64 0 2 3 Whitelist PACA-AU 0.41 0.01 0 0 0.33 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 6 14848129 56658867 1 8 205 2 0 0 1 5 0.3 0.46 9 0 0 9 8 9 12 8 8 34.32 83.38 16.48 0 1 2 Whitelist PACA-AU 8 0.87 0.7 0 0 0.59 1 Linked to high confidence PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA Canonical without polyploidization 11 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 7 89480529 92358155 5 8 205 1 2 1 1 3 0.9 0.01 20 0 0 20 3 4 30 5 7 34.32 99.52 0.25 0 3 5 Whitelist PACA-AU 12 1 0.05 0 0 0.92 1 Linked to high confidence PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA With other complex events 13 0.03 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 8 24086553 130006493 47 52 205 11 11 12 13 5 0.97 0 54 0 0 54 7 15 59 7 9 34.32 85.01 14.85 0 2 1 Whitelist PACA-AU 6 1 0 0 0 0.98 1 High confidence PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA With other complex events 99 0.24 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 9 NA NA 0 0 205 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 10 78540135 112000838 1 2 205 0 2 0 0 0 0.11 0.03 4 0 0 4 4 4 6 5 5 34.32 28.31 68.12 0 2 3 Whitelist PACA-AU 0.54 0.11 0 0 0.48 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 11 63509937 63626374 1 1 205 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 34.32 0.09 99.49 0 2 3 Whitelist PACA-AU 0.62 0.01 NA NA 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 12 25014211 58344707 42 44 205 10 6 14 12 2 0.34 0 35 0 0 35 7 17 55 7 7 34.32 24.57 71.69 0 5 6 Whitelist PACA-AU 0.62 0 0 0 0.59 1 High confidence PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA With other complex events 86 0.21 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 13 76409521 76420703 1 1 205 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 4 4 34.32 90.34 9.66 0 1 2 Whitelist PACA-AU 0.62 0.17 NA NA 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 14 95995255 96110992 1 1 205 0 1 0 0 0 0.39 0.23 3 0 NA NA NA NA 5 5 5 34.32 1.34 95.05 0 2 3 Whitelist PACA-AU 0.62 0.46 0 NA 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 15 NA NA 0 0 205 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.33 NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 16 77546970 78711862 1 3 205 2 1 0 0 0 0.3 0.39 6 0 0 6 5 6 7 5 5 34.32 0.88 99.02 0 2 1 Whitelist PACA-AU 0.62 0.63 0 0 0.59 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 17 19427565 80415097 18 25 205 5 5 5 3 7 0.88 0 42 0 0 42 7 7 44 7 7 34.32 55.7 38.67 8 3 2 Whitelist PACA-AU 12 0.74 0 0 0 0.91 1 High confidence PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA With other complex events 43 0.1 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 18 NA NA 0 0 205 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 19 NA NA 0 0 205 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.42 NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 20 NA NA 0 0 205 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 21 NA NA 0 0 205 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 22 NA NA 0 0 205 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.91 NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0392 X NA NA 0 0 205 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0 NA NA NA 1 No PACA-AU ICGC_0392 PACA 0.5 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578265_G_A,CN:1 2 PACA-AU DO49079 ICGC_0392 male deceased C25.0 50 332 332 NA Included Panc-AdenoCA PACA AU 1 10.92 PACA-AU::ICGC_0393 1 40383818 83248990 1 2 158 0 2 0 0 0 0.11 0.01 3 0 0 NA NA NA 5 3 3 38.97 66.57 33.42 0 2 3 Whitelist PACA-AU 0.54 0.04 0 0 0.48 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 2 79866469 238791182 1 2 158 1 1 0 0 0 0.57 0 3 0 0 NA NA NA NA NA NA 38.97 0.01 99.9 0 2 3 Whitelist PACA-AU 0.68 0.02 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 3 118853309 133883859 5 5 158 0 2 2 1 0 0.53 0.88 14 0 0 14 14 14 21 16 16 38.97 80.25 16.59 0 2 3 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 10 0.03 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 4 8049637 10988933 1 2 158 0 2 0 0 0 0.11 0.01 2 NA 0 NA NA NA NA NA NA 38.97 0.05 99.83 0 2 3 Whitelist PACA-AU 0.54 0.05 NA 0 0.48 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 5 41379251 155129186 1 2 158 1 0 1 0 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 38.97 0 99.85 0 2 NA Whitelist PACA-AU 0.68 0.08 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 6 NA NA 0 0 158 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PACA-AU NA 0.1 NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 7 NA NA 0 0 158 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.17 0 NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 8 131207252 135690995 1 1 158 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 38.97 67.14 29.44 0 4 NA Whitelist PACA-AU 0.62 0.1 NA NA 0.59 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 9 NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 10 83358241 83940718 1 1 158 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 38.97 0.43 99.39 0 2 3 Whitelist PACA-AU 0.62 0.17 NA NA 0.59 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 11 61773036 117590653 1 3 158 1 1 0 0 1 0.57 0.57 5 0 0 5 5 5 6 6 6 38.97 28.26 71.32 0 3 2 Whitelist PACA-AU 0.87 0.79 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 5 0.02 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 12 NA NA 0 0 158 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.04 NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 13 24905703 113852941 24 63 158 4 6 6 8 39 0.72 0 55 0 0 55 8 10 57 8 11 38.97 21.02 78.44 1 2 3 Whitelist PACA-AU 22 0.62 0 0 0 0.8 1 High confidence PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA With other complex events 87 0.28 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 14 33030069 105294737 1 5 158 1 3 1 0 0 0.28 0.64 3 0 0 NA NA NA 4 3 4 38.97 0.19 96.11 0 2 3 Whitelist PACA-AU 0.62 0.85 0 0 0.59 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 10 0.03 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 15 35653572 54675143 2 2 158 1 0 1 0 0 0.57 0.63 1 0 0 NA NA NA NA NA NA 38.97 99.9 0 0 3 NA Whitelist PACA-AU 0.68 0.84 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 16 NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 17 10083359 45616905 1 1 158 0 0 0 1 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 38.97 27.33 68.22 0 1 2 Whitelist PACA-AU 0.62 0.33 NA NA 0.59 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 18 26637136 29530022 2 2 158 0 1 1 0 0 0.57 0.01 3 0 0 NA NA NA 9 6 8 38.97 89 5.93 0 1 2 Whitelist PACA-AU 0.68 0.05 0 0 0.64 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 19 NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 20 NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 21 NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 22 18789020 50349275 22 62 158 6 5 6 5 40 0.98 0 51 0 0 51 5 7 51 5 7 38.97 98.13 1.33 1 1 3 Whitelist PACA-AU 13 0.82 0 0 0 0.99 1 Low confidence PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA With other complex events 84 0.27 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0393 X NA NA 0 0 158 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0393 PACA 0.44 2.08 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579515_GTCT_-,CN:1 2 PACA-AU DO49080 ICGC_0393 male alive C25.0 60 83 83 NA Included Panc-AdenoCA PACA AU 1 2.73 PACA-AU::ICGC_0395 1 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 2 186874200 186901098 1 1 87 1 0 0 0 0 0.39 0.12 2 0.65 NA NA NA NA 7 3 3 73.66 99.89 0.01 0 2 3 Whitelist PACA-AU 0.62 0.3 0.65 NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 3 160991214 164088118 1 1 87 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 73.66 98.3 1.56 0 2 3 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 4 106242084 106603338 1 1 87 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 73.66 99.89 0 0 3 4 Whitelist PACA-AU 0.62 0.87 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 5 51032572 52461885 2 2 87 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 4 3 4 73.66 27.24 70.06 0 3 NA Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 6 65440477 69275308 1 1 87 1 0 0 0 0 0.39 0.82 2 NA NA NA NA NA 6 6 6 73.66 40.56 59.19 0 2 3 Whitelist PACA-AU 0.62 0.96 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 7 86041901 153362571 11 16 87 2 6 2 1 5 0.15 0 24 0 0 24 5 5 27 5 5 73.66 99.78 0 1 8 5 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA With other complex events 27 0.16 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 8 37185901 37861665 2 3 87 2 0 0 0 1 0.11 0 3 0 0 NA NA NA 19 5 5 73.66 71.63 24.94 3 2 3 Whitelist PACA-AU 0.41 0 0 0 0.48 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 9 105779001 105796915 1 1 87 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 4 4 73.66 99.33 0 0 3 4 Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 10 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 11 70023548 70287866 4 4 87 0 0 2 2 0 0.26 0 6 0 0 6 0 3 24 4 4 73.66 51.16 48.41 0 7 8 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 12 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 13 NA NA 0 0 87 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 14 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 15 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 16 5366794 6293370 2 2 87 2 0 0 0 0 0.11 0.08 2 0.03 0 NA NA NA 4 3 3 73.66 98.89 0.99 0 2 3 Whitelist PACA-AU 0.54 0.24 0.03 0 0.48 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 17 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 18 63870007 63889737 1 1 87 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 73.66 99.96 0 0 3 4 Whitelist PACA-AU 0.62 0.75 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 19 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 20 661179 45202144 1 6 87 2 0 3 0 1 0.14 0 13 0.06 0 13 6 8 15 6 8 73.66 98.92 0 0 6 5 Whitelist PACA-AU 0.62 0 0.06 0 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 11 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 21 17378848 17623125 1 1 87 0 0 0 1 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 73.66 0.01 70.28 0 2 NA Whitelist PACA-AU 0.62 0.53 NA NA 0.59 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 22 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0395 X 71565258 143895901 1 4 87 1 0 0 1 2 0.57 0.21 6 0 0 6 3 6 11 3 7 73.66 96.59 0.03 0 2 3 Whitelist PACA-AU 1 0.44 0 0 0.64 0 No PACA-AU ICGC_0395 PACA 0.43 3.29 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-AU DO49087 ICGC_0395 female deceased C25.0 68 260 260 NA Included Panc-AdenoCA PACA AU 1 8.55 PACA-AU::ICGC_0406 1 39566757 197137102 1 6 71 1 5 0 0 0 0.01 0.27 10 0 0 10 10 10 13 12 13 23.88 0.77 99.23 0 2 3 Whitelist PACA-AU 0.25 0.51 0 0 0.19 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 12 0.08 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 2 52116221 221897896 1 3 71 1 1 0 0 1 0.57 0.28 2 NA 0 NA NA NA NA NA NA 23.88 0.01 99.89 0 2 3 Whitelist PACA-AU 0.62 0.53 NA 0 0.64 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 3 80411994 117879612 1 1 71 0 0 0 1 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 23.88 0 99.86 0 2 NA Whitelist PACA-AU 0.62 0.48 NA NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 4 NA NA 0 0 71 0 0 0 0 0 NA 0.81 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.96 0 NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 5 20236894 25313231 1 3 71 2 1 0 0 0 0.3 0.8 1 0 0 NA NA NA NA NA NA 23.88 97.33 0 0 3 NA Whitelist PACA-AU 0.62 0.95 0 0 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 6 37526769 98497801 1 3 71 1 1 0 0 1 0.57 0.04 6 0 0 6 3 5 10 4 4 23.88 86.98 12.88 0 3 1 Whitelist PACA-AU 0.62 0.13 0 0 0.64 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 7 9565227 98144560 1 2 71 0 2 0 0 0 0.11 0.59 4 NA 0.04 4 4 4 5 5 5 23.88 0.12 99.66 0 2 3 Whitelist PACA-AU 0.54 0.81 NA 0.04 0.48 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 8 31594652 105011263 1 8 71 3 1 1 0 3 0.28 0.01 7 0 0 7 4 7 9 6 9 23.88 29.52 67.05 0 1 2 Whitelist PACA-AU 0.54 0.05 0 0 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 13 0.09 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 9 17291957 115308718 1 2 71 1 1 0 0 0 0.57 0.02 5 0.01 0.02 5 0 4 7 4 6 23.88 25.93 73.37 1 1 2 Whitelist PACA-AU 0.68 0.08 0.01 0.02 0.64 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 10 97785339 98112169 1 1 71 0 0 0 1 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 23.88 0 99.82 0 2 NA Whitelist PACA-AU 0.62 0.63 NA NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 11 62928417 74351436 1 1 71 1 0 0 0 0 0.39 0.57 1 0 NA NA NA NA NA NA NA 23.88 0 99.57 0 2 NA Whitelist PACA-AU 0.62 0.8 0 NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 12 NA NA 0 0 71 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.16 0 NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 13 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 14 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 15 77496678 77525250 1 1 71 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 23.88 71.71 28.29 0 2 3 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 16 77690962 78199970 1 1 71 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.88 0 99.91 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 17 35235897 36401760 2 9 71 2 1 0 1 5 0.57 0 10 0 0 10 3 4 11 3 4 23.88 99.21 0.77 0 9 1 Whitelist PACA-AU 8 0.85 0 0 0 0.64 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 13 0.09 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 18 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 19 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 20 NA NA 0 0 71 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.2 NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 21 24906297 24916966 1 1 71 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA 4 3 3 23.88 10.76 66.6 0 2 NA Whitelist PACA-AU 0.62 0.81 NA NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 22 NA NA 0 0 71 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.43 NA NA NA 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0406 X 12873871 12891705 1 1 71 1 0 0 0 0 0.39 0.41 1 0 NA NA NA NA 4 4 4 23.88 37.42 59.19 0 1 NA Whitelist PACA-AU 0.62 0.66 0 NA 0.59 0 No PACA-AU ICGC_0406 PACA 0.56 1.8 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577530_G_T,CN:1 2 PACA-AU DO49113 ICGC_0406 female alive C25.0 46 413 413 NA Included Panc-AdenoCA PACA AU 1 13.59 PACA-AU::ICGC_0412 1 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 2 88123942 88492190 1 1 34 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.93 0.15 99.75 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 3 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 4 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 5 176887275 177818458 1 1 34 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 15.93 0.51 99.35 0 1 2 Whitelist PACA-AU 0.62 0.9 NA NA 0.59 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 7 NA NA 0 0 34 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 8 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 9 4552825 24296725 1 10 34 1 0 1 5 3 0.04 0 19 0 0 19 4 7 21 4 4 15.93 49.27 50.03 0 1 0 Whitelist PACA-AU 0.62 0 0 0 0.38 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 17 0.25 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 10 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 15 NA NA 0 0 34 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.48 NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 17 NA NA 0 0 34 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist PACA-AU NA 0.47 NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 18 3408603 25505804 10 10 34 3 2 3 2 0 0.94 0 16 0 0 16 9 16 20 9 9 15.93 87.4 7.96 14 3 2 Whitelist PACA-AU 0.96 0 0 0 0.96 1 High confidence PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA With other complex events 20 0.29 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 19 49914991 52364534 2 3 34 1 0 0 1 1 0.57 0 4 0 0 4 3 4 4 3 3 15.93 15.5 84.33 6 3 2 Whitelist PACA-AU 0.87 0 0 0 0.64 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 5 0.07 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0412 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0412 PACA 0.45 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577105_C_G,CN:1 2 PACA-AU DO49127 ICGC_0412 female alive C25.0 77 392 392 NA Included Panc-AdenoCA PACA AU 1 12.89 PACA-AU::ICGC_0417 1 29557561 154408765 1 4 47 1 0 2 1 0 0.57 0.09 7 0 0 7 5 7 10 6 6 28.53 6.46 93.53 0 2 3 Whitelist PACA-AU 0.68 0.26 0 0 0.64 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 8 0.09 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 2 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 3 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 4 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 5 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 6 41244637 44905379 3 4 47 1 1 0 1 1 0.8 0 5 0 0 5 3 4 12 5 5 28.53 29.93 69.83 0 1 8 Whitelist PACA-AU 0.68 0 0 0 0.84 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 7 0.07 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 7 NA NA 0 0 47 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 8 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 9 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 10 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 11 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 12 315800 29754430 1 1 47 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 28.53 77.92 21.99 0 2 3 Whitelist PACA-AU 0.62 0.53 NA NA 0.59 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 2 0.02 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 13 NA NA 0 0 47 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.88 NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 14 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 15 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 17 34974437 49255446 6 6 47 2 3 1 0 0 0.34 0 6 0 0 6 5 6 12 5 7 28.53 68.35 26.11 0 2 3 Whitelist PACA-AU 0.62 0 0 0 0.59 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 12 0.13 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 18 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 19 NA NA 0 0 47 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist PACA-AU NA 0.06 0 NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 20 35291357 51412429 1 5 47 0 0 1 1 3 0.57 0 5 0 0 5 0 3 8 0 0 28.53 37.54 61.47 0 2 3 Whitelist PACA-AU 1 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 7 0.07 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 21 NA NA 0 0 47 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.08 NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0417 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0417 PACA 0.46 1.99 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49135 ICGC_0417 male alive C25.0 65 270 270 NA Included Panc-AdenoCA PACA AU 1 8.88 PACA-AU::ICGC_0419 1 49421061 49561040 2 2 132 1 0 1 0 0 0.57 0.42 1 0 0 NA NA NA 17 7 9 73.81 99.72 0.28 0 3 NA Whitelist PACA-AU 0.68 0.66 0 0 0.64 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 2 33811228 80725292 19 19 132 4 5 5 5 0 0.98 0 11 0 0 11 11 11 15 11 11 73.81 99.9 0 0 3 1 Whitelist PACA-AU 1 0 0 0 0.99 1 High confidence PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA Canonical without polyploidization 38 0.14 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 3 20024759 21858061 1 2 132 2 0 0 0 0 0.11 0.09 4 0 0 4 4 4 5 5 5 73.81 99.67 0.3 0 2 3 Whitelist PACA-AU 0.54 0.24 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 4 130612095 182454049 1 2 132 2 0 0 0 0 0.11 0.04 4 0 0 4 4 4 8 5 5 73.81 26.59 71.04 0 0 2 Whitelist PACA-AU 0.54 0.13 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 5 1930938 2927911 3 3 132 1 0 1 1 0 0.8 0.59 5 0.06 0 5 0 3 11 3 8 73.81 83.09 16.79 1 3 0 Whitelist PACA-AU 0.87 0.81 0.06 0 0.84 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 6 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 6 146614472 166226328 1 4 132 4 0 0 0 0 0.01 0.2 6 0 0 6 6 6 9 7 9 73.81 2.3 94.86 0 1 2 Whitelist PACA-AU 0.21 0.42 0 0 0.16 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 8 0.03 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 7 25335153 159117443 1 4 132 4 0 0 0 0 0.01 0.85 7 0 0 7 3 6 8 3 5 73.81 99.74 0.22 7 3 2 Whitelist PACA-AU 0.21 0.98 0 0 0.16 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 8 0.03 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 8 18689950 141744409 2 3 132 0 0 1 1 1 0.57 1 3 0 0 NA NA NA 5 5 5 73.81 99.6 0.27 0 4 2 Whitelist PACA-AU 0.62 1 0 0 0.64 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 5 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 9 122296928 129471657 2 2 132 0 0 1 1 0 0.57 0.65 4 0 0 4 4 4 15 5 15 73.81 5.7 91.22 0 0 2 Whitelist PACA-AU 0.68 0.86 0 0 0.64 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 10 17421023 133499670 1 6 132 3 0 0 1 2 0.11 1 6 0 0 6 3 6 7 3 7 73.81 90.92 8.9 0 4 2 Whitelist PACA-AU 0.68 1 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 10 0.04 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 11 111729719 111906942 2 2 132 0 0 1 1 0 0.57 0.84 4 0 0 4 4 4 11 5 11 73.81 99.56 0.01 0 2 3 Whitelist PACA-AU 0.68 0.97 0 0 0.64 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 12 4654953 4673118 1 2 132 0 0 1 0 1 0.39 0.3 2 NA NA NA NA NA 5 3 3 73.81 99.44 0.48 0 3 5 Whitelist PACA-AU 0.68 0.54 NA NA 0.59 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 3 0.01 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 13 32920045 45394548 1 2 132 2 0 0 0 0 0.11 0.34 2 NA 0 NA NA NA NA NA NA 73.81 100 0 0 3 4 Whitelist PACA-AU 0.54 0.59 NA 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 14 27221797 87141060 1 2 132 2 0 0 0 0 0.11 0.45 4 NA 0 4 4 4 5 5 5 73.81 1.06 98.03 0 0 2 Whitelist PACA-AU 0.54 0.69 NA 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 15 24365777 96407464 1 3 132 2 1 0 0 0 0.3 1 6 0 0 6 3 5 9 5 5 73.81 94.85 0.24 0 3 1 Whitelist PACA-AU 0.62 1 0 0 0.59 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 6 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 16 NA NA 0 0 132 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.81 NA NA NA 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 17 58994725 59394799 1 1 132 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA 8 6 8 73.81 63.79 30.97 0 2 3 Whitelist PACA-AU 0.62 0.94 NA NA 0.59 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 18 23879230 33431637 2 2 132 0 1 1 0 0 0.57 0.78 3 0 0 NA NA NA 9 6 6 73.81 95.35 0 0 1 3 Whitelist PACA-AU 0.68 0.94 0 0 0.64 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 19 12513549 21563072 1 2 132 2 0 0 0 0 0.11 0.75 3 0 0 NA NA NA 5 5 5 73.81 96.69 3.14 3 2 4 Whitelist PACA-AU 0.54 0.91 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 20 14947668 15305002 2 2 132 2 0 0 0 0 0.11 0.76 4 0 0 4 0 3 6 4 4 73.81 98.88 0.15 0 4 2 Whitelist PACA-AU 0.54 0.93 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 21 15770299 47546356 23 23 132 8 4 5 6 0 0.68 0 26 0 0 26 15 26 27 15 15 73.81 41.02 28.05 10 3 4 Whitelist PACA-AU 0.79 0 0 0 0.75 1 High confidence PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA With other complex events 46 0.17 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 22 39586527 39684701 1 1 132 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 73.81 99.81 0.19 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0419 X 51314209 63843380 1 2 132 2 0 0 0 0 0.11 0.42 4 0 0 4 0 3 8 4 4 73.81 81.98 14.64 1 2 0 Whitelist PACA-AU 0.54 0.67 0 0 0.48 1 No PACA-AU ICGC_0419 PACA 0.33 2.92 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49137 ICGC_0419 female alive C25.0 67 232 232 NA Included Panc-AdenoCA PACA AU 1 7.63 PACA-AU::ICGC_0420 1 NA NA 0 0 90 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.05 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 2 18801973 20938092 1 1 90 0 1 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 41.35 0 99.9 0 2 NA Whitelist PACA-AU 0.62 0.69 0 NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 3 149207002 151596957 11 11 90 3 3 2 3 0 0.97 0 13 0 0 13 6 10 17 8 10 41.35 44.65 52.27 3 2 1 Whitelist PACA-AU 0.98 0 0 0 0.98 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 22 0.12 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 4 1635686 1676314 1 1 90 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 41.35 99.95 0.02 0 1 2 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 5 18154023 18262534 1 1 90 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 41.35 0 99.89 0 2 NA Whitelist PACA-AU 0.62 0.15 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 6 169069118 169665020 1 1 90 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA 5 3 3 41.35 8.99 90.99 6 2 NA Whitelist PACA-AU 0.62 0.4 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 7 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 8 NA NA 0 0 90 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.25 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 9 20550361 21998991 2 2 90 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 5 5 5 41.35 99.29 0 0 0 1 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 4 0.02 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 10 67968619 68098438 1 1 90 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 41.35 0.1 99.73 0 1 2 Whitelist PACA-AU 0.62 0.95 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 11 NA NA 0 0 90 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.32 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 12 27339007 85847160 31 32 90 8 7 8 8 1 0.99 0 19 0 0 19 10 19 21 10 10 41.35 62.69 33.57 3 2 3 Whitelist PACA-AU 0.98 0 0 0 1 1 High confidence PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA With other complex events 63 0.35 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 13 35586812 72605935 1 2 90 1 1 0 0 0 0.57 0.56 1 0 0 NA NA NA NA NA NA 41.35 0 100 3 2 NA Whitelist PACA-AU 0.68 0.78 0 0 0.64 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 4 0.02 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 14 22866361 23196784 1 1 90 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 41.35 0.31 98.78 0 2 3 Whitelist PACA-AU 0.62 0.77 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 16 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 17 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.91 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 19 38097524 44320105 1 5 90 1 1 0 0 3 0.57 0 6 0 0 6 0 3 16 3 3 41.35 61.62 31.1 1 2 4 Whitelist PACA-AU 0.62 0 0 0 0.64 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 7 0.04 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 20 NA NA 0 0 90 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 22 NA NA 0 0 90 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.53 NA NA NA 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 0 0 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0420 X 119902146 120234561 1 1 90 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 41.35 99.79 0.21 0 1 2 Whitelist PACA-AU 0.62 0.25 NA NA 0.59 1 No PACA-AU ICGC_0420 PACA 0.55 1.66 Panc-AdenoCA NA 2 0.01 stopgain,17_7578382_C_G,CN:1 2 PACA-AU DO49138 ICGC_0420 male deceased C25.0 74 230 230 NA Included Panc-AdenoCA PACA AU 1 7.57 PACA-AU::ICGC_0486 1 26756656 27503693 1 1 112 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 19.91 0.36 99.31 0 1 2 Whitelist PACA-AU 0.62 0.13 NA NA 0.59 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 2 95882672 200533578 8 8 112 3 3 1 1 0 0.57 0.04 9 0 0 9 9 9 15 15 15 19.91 26.36 73.54 0 2 1 Whitelist PACA-AU 0.68 0.13 0 0 0.64 1 High confidence PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA Canonical without polyploidization 16 0.07 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 3 46302469 128651332 1 3 112 3 0 0 0 0 0.03 0.09 6 0 0 6 6 6 7 7 7 19.91 4.31 95.64 0 1 2 Whitelist PACA-AU 0.41 0.25 0 0 0.33 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 4 124581914 148071216 3 3 112 1 0 1 1 0 0.8 0 8 0 0 8 5 8 26 12 12 19.91 27.46 72.53 1 1 2 Whitelist PACA-AU 0.87 0 0 0 0.84 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 5 11236614 12104336 1 1 112 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 5 5 5 19.91 1.14 98.73 0 1 2 Whitelist PACA-AU 0.62 0.38 NA NA 0.59 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 6 44396552 138555785 2 3 112 1 0 0 1 1 0.57 0.55 4 0 0 4 4 4 7 7 7 19.91 91.77 8.09 0 1 2 Whitelist PACA-AU 10 0.87 0.78 0 0 0.64 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 7 85219288 85290520 1 1 112 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 19.91 0 99.78 0 2 NA Whitelist PACA-AU 0.62 0.12 NA NA 0.59 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 8 30167472 105065721 1 3 112 1 0 0 1 1 0.57 0.67 5 0 0 5 5 5 7 7 7 19.91 1.16 98.84 0 2 1 Whitelist PACA-AU 0.87 0.87 0 0 0.64 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 9 21464735 31150583 3 4 112 0 1 1 1 1 0.8 0.04 4 0 0 4 4 4 9 9 9 19.91 99.86 0 0 0 1 Whitelist PACA-AU 14 0.68 0.15 0 0 0.84 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 10 112699255 131233965 3 3 112 1 0 1 1 0 0.8 0 5 0 0 5 5 5 14 14 14 19.91 8.69 91.19 0 2 1 Whitelist PACA-AU 0.87 0 0 0 0.84 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 11 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 12 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 13 106910562 108233507 1 1 112 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 19.91 1.15 98.85 0 1 2 Whitelist PACA-AU 0.62 0.41 NA NA 0.59 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 14 54673995 66058887 2 2 112 0 0 1 1 0 0.57 0.17 4 0 0 4 4 4 5 5 5 19.91 2.18 96.91 0 1 2 Whitelist PACA-AU 0.68 0.38 0 0 0.64 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 15 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 16 6964848 80879039 1 2 112 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 19.91 0.48 99.13 0 1 2 Whitelist PACA-AU 0.54 0.93 NA 0 0.48 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 17 51421798 56508838 1 2 112 2 0 0 0 0 0.11 0.13 4 0 0 4 4 4 11 5 5 19.91 23.54 76.45 0 1 2 Whitelist PACA-AU 0.54 0.32 0 0 0.48 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 18 48158191 72226173 3 3 112 1 0 1 1 0 0.8 0 6 0 0 6 6 6 16 7 7 19.91 81.85 13.5 3 0 1 Whitelist PACA-AU 0.87 0 0 0 0.84 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 19 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 20 NA NA 0 0 112 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 21 NA NA 0 0 112 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 14 14 14 0 0 0 0 0 0 Whitelist PACA-AU NA 0 0 NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 22 NA NA 0 0 112 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0486 X 9554890 9641153 1 1 112 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 5 5 5 19.91 51.61 48.16 0 1 2 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 1 No PACA-AU ICGC_0486 PACA 0.75 1.84 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579350_T_A,CN:1 2 PACA-AU DO49090 ICGC_0486 female deceased C25.0 77 152 152 NA Included Panc-AdenoCA PACA AU 1 5 PACA-AU::ICGC_0502 1 119582931 120317567 2 2 120 1 1 0 0 0 0.57 0 6 0 0 6 3 4 17 4 4 22.9 48.47 51.53 0 5 6 Whitelist PACA-AU 0.68 0.01 0 0 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 2 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 3 1045935 2770954 38 39 120 9 14 6 9 1 0.32 0 12 0 0 12 9 12 12 9 12 22.9 1.32 98.63 1 1 2 Whitelist PACA-AU 0.68 0 0 0 0.59 1 High confidence PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA Canonical without polyploidization 77 0.32 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 4 1655976 116555723 1 2 120 1 1 0 0 0 0.57 0.07 4 NA 0.04 4 3 4 5 3 3 22.9 0.3 99.62 0 2 1 Whitelist PACA-AU 0.68 0.2 NA 0.04 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 5 23468779 45905623 10 10 120 3 3 2 2 0 0.94 0 5 0 0 5 5 5 5 5 5 22.9 1.8 98.07 0 2 1 Whitelist PACA-AU 0.96 0 0 0 0.96 1 Low confidence PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA Canonical without polyploidization 20 0.08 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 6 NA NA 0 0 120 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.05 NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 7 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 8 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 9 19747585 23350977 2 2 120 0 1 1 0 0 0.57 0.63 3 0 0 NA NA NA 5 3 3 22.9 88.52 8.93 0 1 0 Whitelist PACA-AU 0.68 0.85 0 0 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 10 79459123 79506108 1 1 120 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 22.9 0 99.82 0 2 NA Whitelist PACA-AU 0.62 0.16 NA NA 0.59 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 11 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 12 23604969 24552115 4 4 120 1 1 2 0 0 0.57 0 10 0 0 10 3 4 17 3 3 22.9 16.57 83.35 4 19 20 Whitelist PACA-AU 0.68 0 0 0 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 13 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 14 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 15 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 16 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 17 31909535 50393568 1 1 120 0 0 1 0 0 0.39 0.39 2 NA NA NA NA NA 5 3 3 22.9 67.92 27.65 0 1 2 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 18 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 19 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 20 23169116 23183097 1 2 120 1 0 1 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 22.9 1.16 97.85 0 2 3 Whitelist PACA-AU 0.68 1 NA 0 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 21 NA NA 0 0 120 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 22 39921136 46995951 1 2 120 1 0 0 1 0 0.57 0.06 6 0 0 6 4 6 8 4 7 22.9 13.55 86.45 0 3 4 Whitelist PACA-AU 0.68 0.18 0 0 0.64 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0502 X NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0502 PACA 0.53 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49172 ICGC_0502 female deceased C25.3 60 1021 1021 NA Included Panc-AdenoCA PACA AU 1 33.59 PACA-AU::ICGC_0507 1 15238944 33354118 1 2 52 1 1 0 0 0 0.57 0.6 2 0.44 0 NA NA NA NA NA NA 21.26 0.05 99.95 0 1 2 Whitelist PACA-AU 0.68 0.82 0.44 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 2 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 3 107720196 183187548 1 4 52 0 1 1 0 2 0.57 0.09 1 0 0 NA NA NA NA NA NA 21.26 0 99.95 0 2 NA Whitelist PACA-AU 9 0.68 0.25 0 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 4 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 5 104379283 127606592 4 4 52 0 1 1 2 0 0.57 0.02 3 0 0 NA NA NA 5 5 5 21.26 8.78 91.08 0 2 1 Whitelist PACA-AU 0.68 0.06 0 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 8 0.08 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 6 54007415 55010249 1 1 52 1 0 0 0 0 0.39 0.55 2 0 NA NA NA NA 8 5 5 21.26 86.7 13.16 0 1 2 Whitelist PACA-AU 0.62 0.78 0 NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 7 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 8 39008694 54189671 1 4 52 1 1 0 0 2 0.57 0.34 7 0 0 7 5 7 9 6 6 21.26 58.95 37.62 0 2 1 Whitelist PACA-AU 1 0.59 0 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 9 21206546 118969166 1 9 52 1 0 1 1 6 0.8 0 10 0 0 10 6 6 11 7 7 21.26 26.06 73.24 0 1 0 Whitelist PACA-AU 0.85 0 0 0 0.84 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 12 0.12 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 10 NA NA 0 0 52 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.76 NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 11 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 12 5194740 5474524 2 2 52 0 0 1 1 0 0.57 0.31 1 0.33 0 NA NA NA NA NA NA 21.26 0.16 99.76 0 2 NA Whitelist PACA-AU 0.68 0.56 0.33 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 13 NA NA 0 0 52 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 14 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 15 71774026 71901149 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.26 0.12 99.75 0 2 3 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 16 89485878 89568694 1 1 52 0 1 0 0 0 0.39 0.16 1 0 NA NA NA NA NA NA NA 21.26 0.09 98.95 0 3 NA Whitelist PACA-AU 0.62 0.37 0 NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 17 70241010 70476593 1 1 52 0 1 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 21.26 65.19 30.37 0 1 NA Whitelist PACA-AU 0.62 0.38 NA NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 18 48018088 49049827 1 1 52 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA 4 3 3 21.26 99.96 0 0 0 1 Whitelist PACA-AU 0.62 0.86 NA NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 19 924908 996971 1 1 52 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 21.26 0 99.83 0 2 NA Whitelist PACA-AU 0.62 0.08 NA NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 20 30436138 34787350 1 1 52 0 0 1 0 0 0.39 0.31 1 NA 0 NA NA NA NA NA NA 21.26 42.01 51.45 0 2 NA Whitelist PACA-AU 0.62 0.56 NA 0 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 22 38082396 38123823 2 2 52 1 0 0 1 0 0.57 0 2 0 0 NA NA NA 8 3 4 21.26 91.56 8.44 0 1 3 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0507 X 107141341 107515876 1 1 52 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 21.26 99.76 0.24 0 1 2 Whitelist PACA-AU 0.62 0.76 NA NA 0.59 0 No PACA-AU ICGC_0507 PACA 0.46 1.83 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 PACA-AU DO49181 ICGC_0507 male deceased C25.0 77 1534 1534 NA Included Panc-AdenoCA PACA AU 1 50.46 PACA-AU::ICGC_0518 1 207868643 207886775 1 1 184 1 0 0 0 0 0.39 0.17 2 0 NA NA NA NA 4 4 4 34.95 48.71 48.28 0 1 2 Whitelist PACA-AU 0.62 0.38 0 NA 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 2 18202970 215625137 1 11 184 2 6 0 0 3 0.01 0.02 10 0 0 10 10 10 10 10 10 34.95 11.75 88.16 0 2 3 Whitelist PACA-AU 0.54 0.07 0 0 0.16 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 3 79149914 79698361 3 3 184 0 1 1 1 0 0.8 0.56 2 0 0 NA NA NA 5 4 5 34.95 40.33 59.53 0 1 3 Whitelist PACA-AU 0.87 0.79 0 0 0.84 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 4 39176746 39822578 3 3 184 0 2 1 0 0 0.3 0.46 3 0 0 NA NA NA 6 4 4 34.95 62.05 37.94 0 2 4 Whitelist PACA-AU 0.62 0.7 0 0 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 5 159491225 159745331 2 2 184 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA 10 3 8 34.95 25.11 74.77 0 3 NA Whitelist PACA-AU 0.68 0.12 0 0 0.64 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 6 13565308 162662058 1 5 184 3 1 1 0 0 0.28 0.64 8 0 0 8 3 6 9 4 4 34.95 59.58 40.28 5 1 2 Whitelist PACA-AU 0.62 0.85 0 0 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 7 36919548 157066717 1 7 184 0 5 0 0 2 0 0.1 5 0 0 5 5 5 5 5 5 34.95 0.02 99.73 2 2 3 Whitelist PACA-AU 0.13 0.27 0 0 0.07 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 8 79575422 96220450 2 4 184 0 0 1 1 2 0.57 0.01 2 0 0 NA NA NA 4 3 3 34.95 40.33 55.76 6 2 3 Whitelist PACA-AU 1 0.05 0 0 0.64 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 9 84335013 116590349 1 2 184 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 34.95 21.58 78.26 0 2 NA Whitelist PACA-AU 0.54 1 0 0 0.48 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 10 69738066 69759576 1 1 184 0 1 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 34.95 0 99.82 0 2 NA Whitelist PACA-AU 0.62 0.53 0 NA 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 11 32943565 65248384 1 4 184 1 3 0 0 0 0.11 0.38 3 0 0 NA NA NA NA NA NA 34.95 0.03 99.55 0 2 4 Whitelist PACA-AU 0.54 0.63 0 0 0.48 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 12 46207707 46223627 1 1 184 0 0 1 0 0 0.39 0.6 1 0 NA NA NA NA 5 3 3 34.95 87.22 12.7 5 1 NA Whitelist PACA-AU 0.62 0.81 0 NA 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 13 NA NA 0 0 184 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.77 0 NA NA 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 14 NA NA 0 0 184 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.12 NA NA NA 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 15 85619178 93449529 1 2 184 0 2 0 0 0 0.11 0.5 1 0 0 NA NA NA NA NA NA 34.95 0 99.89 0 2 NA Whitelist PACA-AU 0.54 0.74 0 0 0.48 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 16 NA NA 0 0 184 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 17 32982120 40774790 1 4 184 1 2 0 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 34.95 65.62 29.93 0 2 NA Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 18 35705974 35722775 2 2 184 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA 4 3 3 34.95 75.74 19.62 0 1 NA Whitelist PACA-AU 0.68 0.96 0 0 0.64 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 19 3935801 10967392 1 2 184 0 2 0 0 0 0.11 0.18 1 0 0 NA NA NA NA NA NA 34.95 0 99.83 0 2 NA Whitelist PACA-AU 0.54 0.4 0 0 0.48 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 20 16355518 16365739 1 1 184 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 34.95 0 99 0 2 NA Whitelist PACA-AU 0.62 0.69 NA NA 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 21 27091775 27113603 1 1 184 0 1 0 0 0 0.39 0.5 1 0 NA NA NA NA NA NA NA 34.95 0 77.35 0 2 NA Whitelist PACA-AU 0.62 0.74 0 NA 0.59 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 22 29404923 40056130 1 3 184 0 3 0 0 0 0.03 0.07 5 0 0 5 5 5 6 6 6 34.95 50.63 49.37 0 1 2 Whitelist PACA-AU 0.41 0.21 0 0 0.33 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0518 X 73281851 96344094 1 2 184 1 1 0 0 0 0.57 0.61 1 0 0 NA NA NA NA NA NA 34.95 96.37 0 0 1 NA Whitelist PACA-AU 0.68 0.82 0 0 0.64 0 No PACA-AU ICGC_0518 PACA 0.4 1.68 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578542_A_G,CN:1 1 PACA-AU DO49178 ICGC_0518 male deceased C25.0 58 27 27 NA Included Panc-AdenoCA PACA AU 1 0.89 PACA-AU::ICGC_0521 1 151666358 206732204 1 2 107 1 1 0 0 0 0.57 0.02 4 NA 0 4 3 4 8 4 4 77.18 99.68 0.32 0 4 3 Whitelist PACA-AU 0.68 0.07 NA 0 0.64 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 2 64804963 69826710 2 2 107 0 0 1 1 0 0.57 0.22 4 0 0 4 4 4 7 7 7 77.18 98.36 1.54 0 2 4 Whitelist PACA-AU 0.68 0.45 0 0 0.64 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 3 60394009 143172544 1 4 107 4 0 0 0 0 0.01 0.25 6 0 0 6 5 6 7 5 7 77.18 99.07 0.88 0 4 2 Whitelist PACA-AU 0.21 0.49 0 0 0.16 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 4 131685289 183295953 8 8 107 3 3 1 1 0 0.57 0.03 16 0 0 16 5 16 19 7 19 77.18 96.32 3.46 0 3 1 Whitelist PACA-AU 0.68 0.12 0 0 0.64 1 Low confidence PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA With other complex events 16 0.07 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 5 51314841 160442765 6 7 107 1 2 1 2 1 0.88 0.23 16 0 0 16 10 16 22 12 21 77.18 44.06 55.8 1 2 4 Whitelist PACA-AU 0.96 0.46 0 0 0.91 1 High confidence PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA Before polyploidization 13 0.06 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 6 112420306 154455236 5 5 107 2 1 1 1 0 0.9 0.01 16 0 0 16 12 16 23 13 23 77.18 99.61 0.15 2 3 1 Whitelist PACA-AU 0.93 0.06 0 0 0.92 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 7 47786177 76962600 1 4 107 2 1 1 0 0 0.57 0.67 7 0 0 7 5 7 8 5 8 77.18 47.92 51.86 0 2 4 Whitelist PACA-AU 0.68 0.87 0 0 0.64 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 8 3854960 84468417 1 3 107 2 0 0 0 1 0.11 0.38 8 NA 0 8 8 8 9 9 9 77.18 82.96 17.03 0 2 4 Whitelist PACA-AU 0.62 0.63 NA 0 0.48 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 9 40335567 125502754 7 11 107 2 1 1 3 4 0.67 0 21 0 0 21 21 21 25 22 22 77.18 77.19 22.14 1 4 2 Whitelist PACA-AU 0.87 0 0 0 0.74 1 High confidence PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA Before polyploidization 18 0.08 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 10 85341863 86758469 1 1 107 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA 5 3 3 77.18 28.97 70.86 0 0 2 Whitelist PACA-AU 0.62 0.74 NA NA 0.59 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 11 NA NA 0 0 107 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.49 NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 12 8048119 87466102 1 2 107 1 0 0 1 0 0.57 0.64 4 0.01 0 4 4 4 8 8 8 77.18 88.46 11.46 0 2 4 Whitelist PACA-AU 0.68 0.85 0.01 0 0.64 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 13 64071448 112631475 1 2 107 2 0 0 0 0 0.11 1 6 0 0 6 3 5 8 3 4 77.18 93.02 4.21 0 2 3 Whitelist PACA-AU 0.54 1 0 0 0.48 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 14 NA NA 0 0 107 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.93 NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 15 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 16 999605 78691913 1 6 107 5 1 0 0 0 0.01 0.03 15 0 0 15 6 6 16 6 7 77.18 97.4 2.47 0 4 2 Whitelist PACA-AU 0.25 0.1 0 0 0.19 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 17 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 18 26834258 77923090 3 4 107 0 0 2 1 1 0.3 0.03 6 0 0 6 6 6 7 7 7 77.18 54.11 45.65 0 2 6 Whitelist PACA-AU 0.54 0.1 0 0 0.59 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 19 2122822 47452912 1 3 107 2 0 0 1 0 0.3 0.16 7 0.02 0 7 5 7 8 5 8 77.18 89.64 10.18 0 3 1 Whitelist PACA-AU 0.62 0.37 0.03 0 0.59 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 20 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 21 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 22 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0521 X 62580449 93628574 2 2 107 0 0 1 1 0 0.57 0.02 7 0 0 7 6 7 25 7 11 77.18 58.01 38.6 0 4 6 Whitelist PACA-AU 0.68 0.09 0 0 0.64 1 No PACA-AU ICGC_0521 PACA 0.57 3.43 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7579369_C_G,CN:2 4 PACA-AU DO49183 ICGC_0521 female deceased C25.0 51 429 429 NA Included Panc-AdenoCA PACA AU 1 14.11 PACA-AU::ICGC_0522 1 35264067 46448813 7 12 80 0 2 3 2 5 0.44 0 13 0 0 13 4 6 37 5 7 69.35 57.42 39.61 0 2 4 Whitelist PACA-AU 8 0.62 0 0 0 0.64 0 Low confidence PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA With other complex events 19 0.12 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 2 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 3 146001026 146011518 2 2 80 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 6 3 3 69.35 69.38 30.45 0 3 NA Whitelist PACA-AU 0.68 1 0 0 0.64 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 4 NA NA 0 0 80 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-AU NA 0.15 NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 5 60630287 60669255 1 1 80 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 69.35 99.86 0 0 4 NA Whitelist PACA-AU 0.62 0.19 NA NA 0.59 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 6 NA NA 0 0 80 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.48 NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 7 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 8 12160765 82189366 2 18 80 2 1 0 1 14 0.57 0 29 0 0 29 5 5 34 5 5 69.35 70.06 26.52 12 5 3 Whitelist PACA-AU 11 0.68 0 0 0 0.64 0 Linked to low confidence PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA With other complex events 22 0.14 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 9 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 10 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 11 21276335 41566716 1 5 80 2 0 0 0 3 0.11 0 8 0 0 8 5 5 15 5 5 69.35 95.94 3.64 1 3 4 Whitelist PACA-AU 8 0.93 0.01 0 0 0.48 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 7 0.04 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 12 23880042 130636352 1 2 80 0 0 0 2 0 0.11 0.79 6 0 0 6 3 4 7 3 4 69.35 96.26 0 0 3 5 Whitelist PACA-AU 0.54 0.94 0 0 0.48 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 13 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 14 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 15 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 16 78972642 79157925 1 2 80 0 2 0 0 0 0.11 0.48 4 0 0 4 4 4 7 5 5 69.35 99.91 0 0 5 6 Whitelist PACA-AU 0.54 0.72 0 0 0.48 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 17 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 18 NA NA 0 0 80 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.9 NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 19 7608109 41260283 1 2 80 1 0 1 0 0 0.57 0 13 0 0 13 0 6 22 3 6 69.35 50.98 41.75 1 7 5 Whitelist PACA-AU 0.68 0 0 0 0.64 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 4 0.02 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 20 15249868 15321071 1 1 80 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 69.35 98.92 0.11 0 2 4 Whitelist PACA-AU 0.62 1 NA NA 0.59 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 21 44762736 44774035 1 1 80 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 69.35 77.35 0 0 4 NA Whitelist PACA-AU 0.62 0.84 NA NA 0.59 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 2 0.01 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 22 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0522 X NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0522 PACA 0.4 3.42 Panc-AdenoCA NA 0 0 NA 3 PACA-AU DO49184 ICGC_0522 male deceased C25.0 56 455 455 NA Included Panc-AdenoCA PACA AU 1 14.97 PACA-AU::ICGC_0526 1 241633082 241832063 1 1 127 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 4 5 31.84 42.19 54.84 0 2 3 Whitelist PACA-AU 0.62 0.01 NA NA 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 2 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 3 34778509 37373241 1 2 127 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 5 3 3 31.84 0.04 99.82 0 2 1 Whitelist PACA-AU 0.68 0.06 NA 0 0.64 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 4 47986829 92282286 1 3 127 3 0 0 0 0 0.03 0.05 4 0 0 4 4 4 5 5 5 31.84 0.1 97.44 0 1 2 Whitelist PACA-AU 0.41 0.16 0 0 0.33 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 5 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 6 11005830 53074096 16 16 127 3 3 5 5 0 0.8 0 28 0 0 28 4 6 29 4 7 31.84 99.74 0 1 1 7 Whitelist PACA-AU 0.87 0.01 0 0 0.84 1 Low confidence PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA With other complex events 32 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 7 110567698 111026118 1 2 127 1 1 0 0 0 0.57 0.07 2 NA 0 NA NA NA NA NA NA 31.84 0.09 99.67 0 1 2 Whitelist PACA-AU 0.68 0.21 NA 0 0.64 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 8 NA NA 0 0 127 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.67 0 NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 9 8558619 9782405 2 2 127 2 0 0 0 0 0.11 1 3 0.01 0 NA NA NA 5 5 5 31.84 99.83 0 0 1 0 Whitelist PACA-AU 0.54 1 0.01 0 0.48 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 10 33216828 36341813 1 7 127 1 1 1 0 4 0.8 0.01 7 0 0 7 4 4 14 4 4 31.84 96.6 0 0 7 6 Whitelist PACA-AU 0.62 0.04 0 0 0.84 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 11 46830161 70562243 1 3 127 1 2 0 0 0 0.3 0.53 1 0 0 NA NA NA NA NA NA 31.84 0 99.57 0 2 NA Whitelist PACA-AU 0.62 0.76 0 0 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 12 77174515 81375488 4 16 127 2 0 2 0 12 0.26 0 10 0 0 10 10 10 10 10 10 31.84 41.87 58.05 0 1 2 Whitelist PACA-AU 13 0.95 0 0 0 0.59 1 High confidence PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA Canonical without polyploidization 20 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 13 42400145 51281146 11 23 127 2 2 5 2 12 0.48 0 13 0 0 13 13 13 13 13 13 31.84 99.22 0.78 0 1 2 Whitelist PACA-AU 12 0.95 0 0 0 0.64 1 High confidence PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA Canonical without polyploidization 34 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 14 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 15 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 16 4628924 90122371 21 21 127 5 4 5 7 0 0.82 0 16 0 0 16 14 16 17 14 14 31.84 21.21 78.43 2 2 1 Whitelist PACA-AU 0.89 0 0 0 0.87 1 High confidence PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA Canonical without polyploidization 42 0.17 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 17 62899010 63327107 1 1 127 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 3 31.84 27.06 67.7 0 2 3 Whitelist PACA-AU 0.62 0.51 NA NA 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 18 19814717 21988401 4 8 127 2 2 0 0 4 0.26 0 7 0 0 7 4 5 22 4 6 31.84 95.35 0 0 7 6 Whitelist PACA-AU 0.87 0 0 0 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 19 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 20 14848180 15668469 1 1 127 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 31.84 0 99.01 0 2 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 21 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 22 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0526 X 74676209 89660197 1 1 127 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 31.84 90.35 9.65 0 1 2 Whitelist PACA-AU 0.62 0.09 NA NA 0.59 1 No PACA-AU ICGC_0526 PACA 0.54 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 PACA-AU DO49193 ICGC_0526 male deceased C25.0 60 1 1 NA Included Panc-AdenoCA PACA AU 1 0.03 PACA-AU::ICGC_0535 1 60566914 60732484 1 1 102 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 14.35 0.07 99.93 0 1 2 Whitelist PACA-AU 0.62 0.03 NA NA 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 2 12465784 142110023 1 4 102 2 2 0 0 0 0.26 0.28 7 0 0 7 5 7 7 5 5 14.35 0.13 99.78 0 2 1 Whitelist PACA-AU 0.62 0.52 0 0 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 8 0.04 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 3 59762686 185835208 1 2 102 2 0 0 0 0 0.11 0.05 3 NA 0 NA NA NA NA NA NA 14.35 0.51 99.44 0 2 1 Whitelist PACA-AU 0.54 0.16 NA 0 0.48 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 4 131688011 183192710 2 2 102 1 0 0 1 0 0.57 0.42 7 0 0 7 7 7 11 11 11 14.35 1.65 98.33 0 2 1 Whitelist PACA-AU 0.68 0.67 0 0 0.64 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 5 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 6 25273614 62346185 6 6 102 1 3 1 1 0 0.57 0.01 11 0 0 11 8 11 18 15 15 14.35 29.76 67.32 0 1 2 Whitelist PACA-AU 0.68 0.05 0 0 0.64 1 High confidence PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA Canonical without polyploidization 12 0.06 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 7 107217358 107565543 2 2 102 0 0 1 1 0 0.57 1 4 0 0 4 4 4 7 7 7 14.35 1.91 97.86 6 1 2 Whitelist PACA-AU 0.68 1 0 0 0.64 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 4 0.02 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 8 104699212 104838985 1 1 102 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 14.35 0 99.99 0 2 NA Whitelist PACA-AU 0.62 0.2 NA NA 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 9 21747624 22597704 3 3 102 0 1 1 1 0 0.8 0.6 3 0 0 NA NA NA 5 5 5 14.35 99.88 0 0 1 0 Whitelist PACA-AU 0.87 0.82 0 0 0.84 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 6 0.03 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 10 89522467 110477428 6 7 102 2 2 1 1 1 0.88 0.03 8 0 0 8 5 8 13 6 6 14.35 14.25 85.58 1 1 0 Whitelist PACA-AU 0.96 0.1 0 0 0.91 1 Low confidence PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA Canonical without polyploidization 13 0.06 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 11 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 12 80590486 121388006 13 14 102 5 3 3 2 1 0.69 0 17 0 0 17 11 17 20 11 11 14.35 34.99 64.93 21 1 2 Whitelist PACA-AU 0.68 0 0 0 0.77 1 High confidence PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA Canonical without polyploidization 27 0.13 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 13 65653564 65673948 1 1 102 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 14.35 0 100 0 2 NA Whitelist PACA-AU 0.62 0.51 NA NA 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 14 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 15 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 16 78661872 78673263 1 1 102 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 14.35 0 99.89 0 2 NA Whitelist PACA-AU 0.62 0.76 NA NA 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 17 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 18 896558 21110916 12 12 102 3 5 2 2 0 0.57 0 18 0 0 18 4 7 19 4 7 14.35 88.81 6.49 4 1 3 Whitelist PACA-AU 0.68 0 0 0 0.64 1 Low confidence PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA With other complex events 24 0.12 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 19 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 20 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 21 10611709 42901454 1 1 102 0 1 0 0 0 0.39 1 3 NA NA NA NA NA NA NA NA 14.35 47.74 22.26 0 1 2 Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 2 0.01 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 22 NA NA 0 0 102 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA NA 0 0 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0535 X 141345603 144825631 6 6 102 1 2 1 2 0 0.88 0 7 0 0 7 5 7 26 18 18 14.35 41.27 55.32 3 2 1 Whitelist PACA-AU 0.93 0 0 0 0.91 1 Low confidence PACA-AU ICGC_0535 PACA 0.46 1.85 Panc-AdenoCA Canonical without polyploidization 12 0.06 NA 2 PACA-AU DO49166 ICGC_0535 female alive C25.0 40 222 222 NA Included Panc-AdenoCA PACA AU 1 7.3 PACA-AU::ICGC_0536 1 NA NA 0 0 59 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.58 NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 2 167051773 233617455 9 10 59 2 3 2 2 1 0.95 0 15 0 0 15 10 15 17 11 11 35.58 9.21 90.7 0 2 1 Whitelist PACA-AU 0.86 0 0 0 0.97 1 High confidence PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA Canonical without polyploidization 19 0.16 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 3 68444525 68520258 1 1 59 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 35.58 0 99.86 0 2 NA Whitelist PACA-AU 0.62 0.69 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 4 91955278 91973270 1 1 59 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 4 4 35.58 72.21 25.21 0 1 2 Whitelist PACA-AU 0.62 0.69 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 5 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 6 40172681 151536953 1 3 59 3 0 0 0 0 0.03 1 3 0 0 NA NA NA NA NA NA 35.58 0.01 99.84 0 2 1 Whitelist PACA-AU 0.41 1 0 0 0.33 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 7 154180236 154203356 1 1 59 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 35.58 0.01 99.76 0 1 2 Whitelist PACA-AU 0.62 0.63 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 8 90120747 90291038 1 1 59 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 35.58 44.44 55.55 0 3 NA Whitelist PACA-AU 0.62 0.93 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 9 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 11 80914389 80940997 1 1 59 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.58 0 99.57 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 12 27103613 56382459 5 5 59 3 0 1 1 0 0.28 0 10 0 0 10 5 9 20 5 11 35.58 71.03 25.23 0 1 3 Whitelist PACA-AU 0.62 0 0 0 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 10 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 13 80152004 109235788 1 2 59 2 0 0 0 0 0.11 0.46 4 0 0 4 3 4 5 3 3 35.58 25.25 74.75 0 1 0 Whitelist PACA-AU 0.54 0.7 0 0 0.48 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 14 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 16 78323275 78633505 1 2 59 1 1 0 0 0 0.57 0.67 2 NA 0 NA NA NA NA NA NA 35.58 0.2 99.71 0 1 2 Whitelist PACA-AU 0.68 0.87 NA 0 0.64 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 17 NA NA 0 0 59 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 0.88 NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 18 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA 1 NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 19 NA NA 0 0 59 0 0 0 0 0 NA 0 NA 0.14 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PACA-AU NA 0.01 0.14 NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 20 15072541 15151061 1 1 59 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 35.58 0 99.03 0 2 NA Whitelist PACA-AU 0.62 1 NA NA 0.59 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0536 X 45963635 149230272 1 3 59 1 0 1 1 0 0.8 0.54 1 0 0 NA NA NA NA NA NA 35.58 100 0 0 1 NA Whitelist PACA-AU 0.87 0.77 0 0 0.84 1 No PACA-AU ICGC_0536 PACA 0.38 1.82 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 3 PACA-AU DO49168 ICGC_0536 male alive C25.0 58 149 149 NA Included Panc-AdenoCA PACA AU 1 4.9 PACA-AU::ICGC_0543 1 191248655 239622574 2 2 161 0 0 1 1 0 0.57 0.46 3 0 0 NA NA NA 12 7 10 25.05 11.17 85.8 0 1 2 Whitelist PACA-AU 0.68 0.71 0 0 0.64 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 2 13041037 33531248 2 2 161 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 25.05 0.14 99.77 0 2 NA Whitelist PACA-AU 0.68 0.02 0 0 0.64 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 3 60474665 190158609 1 6 161 1 2 0 0 3 0.3 0.12 6 0 0 6 3 5 7 3 5 25.05 0.15 99.73 0 2 1 Whitelist PACA-AU 0.68 0.31 0 0 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 4 19184031 182208044 1 7 161 7 0 0 0 0 0 0.75 10 0 0 10 5 6 12 5 7 25.05 14.21 83.22 2 1 2 Whitelist PACA-AU 0.02 0.92 0 0 0.01 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 5 2166942 136547144 2 5 161 1 1 1 1 1 1 1 10 0 0 10 5 5 12 5 6 25.05 28.46 71.42 0 2 1 Whitelist PACA-AU 0.93 1 0 0 1 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 6 3853546 35199830 2 4 161 0 1 0 1 2 0.57 0.18 8 0 0 8 8 8 16 13 13 25.05 24.06 73.03 2 1 2 Whitelist PACA-AU 0.68 0.4 0 0 0.64 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 7 28956141 31357724 3 3 161 1 0 1 1 0 0.8 0.22 5 0 0 5 5 5 12 9 9 25.05 2.43 97.51 0 2 1 Whitelist PACA-AU 0.87 0.45 0 0 0.84 0 Linked to low confidence PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA Canonical without polyploidization 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 8 15187310 15523759 1 1 161 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 0 0 25.05 99.86 0 0 0 1 Whitelist PACA-AU 0.62 0.21 NA NA 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 9 187480 137300565 14 16 161 2 2 5 5 2 0.46 0 32 0 0 32 6 10 32 6 7 25.05 76.03 23.27 15 2 3 Whitelist PACA-AU 7 0.62 0 0 0 0.64 0 Low confidence PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA With other complex events 30 0.09 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 10 58508469 108142148 1 4 161 1 2 0 0 1 0.3 0.45 2 0 0 NA NA NA NA NA NA 25.05 0.14 99.69 0 1 2 Whitelist PACA-AU 0.62 0.7 0 0 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 11 132801358 132817913 1 1 161 1 0 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 25.05 0 99.57 0 2 NA Whitelist PACA-AU 0.62 0.7 0 NA 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 12 38036524 105236884 1 3 161 3 0 0 0 0 0.03 0.09 4 0 0 4 4 4 5 5 5 25.05 54.87 41.38 0 2 3 Whitelist PACA-AU 0.41 0.26 0 0 0.33 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 13 48989559 89850567 1 2 161 2 0 0 0 0 0.11 0.51 1 0 0 NA NA NA NA NA NA 25.05 25.19 60.66 0 2 NA Whitelist PACA-AU 0.54 0.75 0 0 0.48 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 14 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 15 33209808 85922428 1 7 161 2 1 0 0 4 0.3 0.09 4 0 0 4 4 4 6 6 6 25.05 3.46 81.13 0 1 2 Whitelist PACA-AU 0.77 0.25 0 0 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 16 21520742 64179905 1 3 161 1 0 0 1 1 0.57 0.33 6 0 0 6 3 6 10 3 5 25.05 8.11 91.8 0 2 3 Whitelist PACA-AU 0.62 0.58 0 0 0.64 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 17 19394221 27560947 3 6 161 1 1 4 0 0 0.11 0.08 10 0 0 10 3 5 16 5 7 25.05 42.41 52.93 0 1 2 Whitelist PACA-AU 0.54 0.24 0 0 0.48 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 18 48479741 50653739 1 1 161 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 3 3 25.05 82.93 16.91 0 0 1 Whitelist PACA-AU 0.62 0.33 NA NA 0.59 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 19 11724386 16876329 1 2 161 0 2 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 25.05 0 99.83 0 2 NA Whitelist PACA-AU 0.54 1 NA 0 0.48 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 20 15750921 60842706 18 19 161 8 2 5 3 1 0.2 0 19 0 0 19 6 7 19 6 7 25.05 17.99 74.95 0 2 4 Whitelist PACA-AU 0.62 0 0 0 0.59 0 Low confidence PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA With other complex events 37 0.11 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 21 NA NA 0 0 161 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-AU NA NA NA NA NA 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 22 NA NA 0 0 161 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PACA-AU NA 0.32 NA NA NA 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-AU::ICGC_0543 X 13188567 107375974 3 8 161 1 1 1 0 5 0.8 0.01 1 0 0 NA NA NA 4 3 4 25.05 100 0 0 1 NA Whitelist PACA-AU 15 0.87 0.05 0 0 0.84 0 No PACA-AU ICGC_0543 PACA 0.53 1.89 Panc-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-AU DO49204 ICGC_0543 male deceased C25.0 67 156 156 NA Included Panc-AdenoCA PACA AU 1 5.13 PACA-CA::PCSI_0001 1 NA NA 0 0 37 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 2 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 3 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 4 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 5 2395499 10202173 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 0 5 22.99 47.77 52.09 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 6 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 7 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 8 41966572 42121913 1 1 37 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 4 0 0 22.99 96.94 3.06 0 3 4 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 9 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 10 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 11 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 13 23629089 47807530 1 3 37 2 0 0 1 0 0.3 0.04 10 0 0 10 4 6 13 4 4 22.99 75.54 10.3 0 3 2 Whitelist PACA-CA 0.62 0.13 0 0 0.59 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 6 0.08 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 15 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 16 69235847 87116535 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 4 4 4 22.99 4.53 95.36 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 17 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 18 18631561 76740272 22 22 37 4 3 6 9 0 0.28 0 32 0 0 32 4 5 33 4 4 22.99 98.87 0.35 12 8 7 Whitelist PACA-CA 0.62 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA With other complex events 44 0.59 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 20 23708105 23783935 1 1 37 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 22.99 0 99.02 0 2 NA Whitelist PACA-CA 0.62 0.41 NA NA 0.59 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 22 18275971 38855055 1 2 37 1 0 0 1 0 0.57 0.07 5 NA 0 5 3 5 6 4 4 22.99 16.72 59.5 0 2 1 Whitelist PACA-CA 0.68 0.21 NA 0 0.64 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0001 X NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0001 PACA 0.15 1.99 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35114 PCSI_0001 female deceased C25 no treatment 65 1738 NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 57.17 PACA-CA::PCSI_0004 1 74745353 75461530 14 14 74 2 4 4 4 0 0.84 0 1 0 0 NA NA NA NA NA NA 78.66 96.98 0 0 3 NA Whitelist PACA-CA 0.9 0.01 0 0 0.88 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 28 0.19 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 2 96646356 149681518 1 2 74 1 1 0 0 0 0.57 0.09 5 NA 0 5 3 5 8 3 5 78.66 97.32 0 3 4 5 Whitelist PACA-CA 0.68 0.25 NA 0 0.64 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 3 161933548 161961751 1 1 74 0 0 0 1 0 0.39 0.49 1 NA 0 NA NA NA NA NA NA 78.66 96.8 0 0 6 NA Whitelist PACA-CA 0.62 0.74 NA 0 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 4 60373737 65113323 1 1 74 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA 4 4 4 78.66 31.8 68.18 0 2 3 Whitelist PACA-CA 0.62 0.73 NA NA 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 5 10052839 10179270 1 1 74 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 78.66 97.03 0 0 4 NA Whitelist PACA-CA 0.62 0.84 NA NA 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 6 501745 98839541 5 5 74 0 1 2 2 0 0.53 0.09 15 0 0 15 8 10 15 8 10 78.66 54.55 42.17 0 3 5 Whitelist PACA-CA 0.68 0.24 0 0 0.64 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 7 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 8 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 9 8696247 119750224 1 6 74 3 0 2 0 1 0.14 0 24 0 0 24 5 8 24 5 8 78.66 83.39 15.91 6 1 3 Whitelist PACA-CA 0.54 0 0 0 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 11 0.07 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 10 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 11 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 12 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 13 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 14 60031740 103398905 1 1 74 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 78.66 99.12 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 15 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 16 NA NA 0 0 74 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 17 25982420 26087771 1 1 74 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 78.66 68 27.32 0 4 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 18 22993170 32151189 2 2 74 0 0 1 1 0 0.57 0.14 1 0 0 NA NA NA 6 3 4 78.66 95.35 0 0 1 NA Whitelist PACA-CA 0.68 0.33 0 0 0.64 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 19 28541766 36519064 4 6 74 0 1 1 2 2 0.57 0 8 0 0 8 3 4 21 3 4 78.66 92.72 0 0 6 7 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 20 3813951 10604352 1 1 74 0 1 0 0 0 0.39 0.67 2 NA 0 NA NA NA NA NA NA 78.66 99.03 0 0 4 6 Whitelist PACA-CA 0.62 0.88 NA 0 0.59 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 21 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 22 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0004 X NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0004 PACA 0.83 3.41 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_T_C,CN:2 4 PACA-CA DO35376 PCSI_0004 female deceased C25.0 chemotherapy complete response 42 877 877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.85 PACA-CA::PCSI_0015 1 3415964 191894581 4 29 541 0 0 1 3 25 0.11 0.08 30 0 0 30 13 18 36 13 18 44.34 28.8 68.19 0 2 3 Whitelist PACA-CA 12_18_3_4_8 0.68 0.22 0 0 0.48 0 Linked to high confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 33 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 False positive; manually removed PACA-CA::PCSI_0015 2 154803413 189497988 4 10 541 0 4 0 0 6 0.01 0.24 8 0 0 8 6 8 39 15 15 44.34 88.23 9.17 0 3 4 Whitelist PACA-CA 12 0.07 0.48 0 0 0.16 0 Linked to high confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA After polyploidization 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 3 74786302 147259331 3 11 541 1 0 1 1 8 0.8 0.87 15 0 0 15 5 14 27 5 7 44.34 74.47 22.05 0 3 2 Whitelist PACA-CA 1_2_6 0.87 1 0 0 0.84 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 4 10893126 58422207 26 35 541 9 5 6 6 9 0.71 0 29 0 0 29 5 7 36 5 6 44.34 31.18 65.94 1 2 1 Whitelist PACA-CA 8 0.68 0 0 0 0.79 0 Low confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 61 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 5 57191443 125970888 3 5 541 0 0 1 2 2 0.3 0.79 4 0 0 4 3 4 17 5 6 44.34 36.38 63.5 0 2 3 Whitelist PACA-CA 0.62 0.94 0 0 0.59 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 6 6624406 56854774 5 9 541 2 0 1 2 4 0.53 0.79 7 0 0 7 4 7 22 9 9 44.34 40.42 56.67 0 3 2 Whitelist PACA-CA 10_3 0.97 0.94 0 0 0.64 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 7 56204033 125643006 9 32 541 2 2 2 3 23 0.95 0 36 0 0 36 8 10 47 8 10 44.34 83.08 14.37 4 5 4 Whitelist PACA-CA 11_12 0.74 0 0 0 0.97 0 High confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 41 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 8 100785898 143451880 15 30 541 6 5 1 3 15 0.27 0 49 0 0 49 9 34 60 9 9 44.34 44.79 55.19 5 4 3 Whitelist PACA-CA 10_12_21 0.93 0 0 0 0.59 0 High confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 45 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 9 21671619 22758538 1 2 541 1 1 0 0 0 0.57 0.08 1 0 0 NA NA NA 6 6 6 44.34 20.24 79.61 0 2 NA Whitelist PACA-CA 0.68 0.22 0 0 0.64 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 10 5398824 88241618 1 17 541 0 4 0 1 12 0.04 0.84 18 0 0 18 7 13 19 7 13 44.34 41.02 58.81 0 2 3 Whitelist PACA-CA 6_8 0.62 0.97 0 0 0.36 0 Linked to high confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 22 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 11 13107124 96905438 1 9 541 0 4 0 1 4 0.04 0.61 13 0 0 13 7 13 16 7 14 44.34 86.39 10.1 0 3 4 Whitelist PACA-CA 0.62 0.82 0 0 0.36 0 Linked to high confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 12 1762415 132632652 5 36 541 1 0 2 2 31 0.53 0 44 0 0 44 8 42 47 8 8 44.34 49.17 47.08 0 4 3 Whitelist PACA-CA 1_2_7_8 0.78 0 0 0 0.64 0 High confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 41 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 13 68448583 95178339 1 4 541 0 2 0 0 2 0.11 0.13 6 0 0 6 6 6 7 7 7 44.34 0.44 85.41 0 2 3 Whitelist PACA-CA 0.54 0.32 0 0 0.48 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 14 64601909 64994891 1 1 541 0 1 0 0 0 0.39 0.39 2 0 NA NA NA NA 12 3 9 44.34 7.96 76.12 0 3 4 Whitelist PACA-CA 0.62 0.63 0 NA 0.59 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 15 44380856 88389185 1 9 541 0 3 0 0 6 0.03 0.51 7 0 0 7 4 7 7 4 4 44.34 32.84 51.75 0 2 3 Whitelist PACA-CA 4_6 0.15 0.76 0 0 0.33 0 Linked to low confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 12 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 16 9514932 61841333 1 4 541 1 2 0 0 1 0.3 0.89 9 0 0 9 4 7 16 8 8 44.34 68.98 26.55 0 2 3 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 17 57830478 58376618 7 7 541 1 6 0 0 0 0 0 12 0 0 12 0 3 21 8 8 44.34 45.71 54.29 0 42 3 Whitelist PACA-CA 0.13 0.02 0 0 0.09 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 18 751562 43071863 3 8 541 1 1 0 1 5 0.8 0.06 19 0 0 19 5 6 22 5 5 44.34 41.77 52.68 2 2 4 Whitelist PACA-CA 1_6 0.62 0.19 0 0 0.84 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 19 31971859 48940867 1 11 541 0 1 1 0 9 0.57 0 4 0 0 4 3 4 8 5 5 44.34 22.11 77.72 0 2 1 Whitelist PACA-CA 2_4 0.41 0 0 0 0.64 0 Linked to low confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA Canonical without polyploidization 13 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 20 10636203 53036071 1 10 541 0 2 2 0 6 0.26 0.3 4 0 0 4 4 4 6 6 6 44.34 92.96 0 0 3 4 Whitelist PACA-CA 0.62 0.54 0 0 0.59 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 21 18184323 34748019 1 13 541 0 2 0 1 10 0.3 0 13 0 0 13 6 8 16 6 8 44.34 13.77 62.4 0 2 3 Whitelist PACA-CA 2_7_8 0.62 0.02 0 0 0.59 0 Linked to high confidence PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA With other complex events 16 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 22 29404979 29952527 1 2 541 0 2 0 0 0 0.11 0.55 2 0 0 NA NA NA 6 6 6 44.34 25.08 51.14 0 2 3 Whitelist PACA-CA 0.54 0.77 0 0 0.48 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0015 X 2317800 154499588 1 15 541 2 8 0 0 5 0 0.77 11 0 0 11 5 7 11 5 5 44.34 20.81 78.87 1 2 1 Whitelist PACA-CA 0.36 0.93 0 0 0.04 0 No PACA-CA PCSI_0015 PACA 0.94 2.58 Panc-AdenoCA NA 25 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51476 PCSI_0015 female deceased C25.2 no treatment 45 1576 1576 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 51.84 PACA-CA::PCSI_0019 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 5 176334426 177019623 1 1 16 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 5 3 3 27.72 27.29 70.04 0 2 4 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 2 0.06 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 7 109917737 109984781 1 1 16 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 4 4 27.72 14.58 85.37 0 1 2 Whitelist PACA-CA 0.62 0.04 NA NA 0.59 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 2 0.06 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 8 NA NA 0 0 16 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.79 NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 9 12177212 29755591 1 2 16 2 0 0 0 0 0.11 0.13 4 NA 0 4 3 4 5 3 3 27.72 12.45 87.55 0 1 0 Whitelist PACA-CA 0.54 0.32 NA 0 0.48 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 4 0.12 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 14 NA NA 0 0 16 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.65 NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 16 NA NA 0 0 16 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.2 NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 17 51311856 68386705 1 2 16 0 0 1 1 0 0.57 0.01 3 0.03 0 NA NA NA 5 5 5 27.72 62.96 37.04 0 2 1 Whitelist PACA-CA 0.68 0.04 0.03 0 0.64 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 4 0.12 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 18 9204699 14433801 2 4 16 1 1 2 0 0 0.57 0 6 0 0 6 0 4 10 3 5 27.72 91.1 4.16 0 1 2 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 8 0.25 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0019 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0019 PACA 0.72 1.77 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7578513_T_-,CN:1 1 PACA-CA DO35098 PCSI_0019 male deceased C25.0 chemotherapy complete response 63 1499 1499 Current reformed smoker, duration not specified 45 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 49.31 PACA-CA::PCSI_0023 1 12556780 221189558 1 4 114 4 0 0 0 0 0.01 0.11 8 0.08 0 8 8 8 9 9 9 12.87 9.68 90.31 0 1 2 Whitelist PACA-CA 0.21 0.29 0.08 0 0.16 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 2 14191317 219852324 1 5 114 5 0 0 0 0 0 0.17 8 0 0 8 8 8 9 9 9 12.87 0.2 99.7 0 1 2 Whitelist PACA-CA 0.1 0.39 0 0 0.07 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 10 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 3 96292820 103951411 2 2 114 0 0 1 1 0 0.57 0.46 3 0 0 NA NA NA 16 8 16 12.87 1.05 95.29 1 2 1 Whitelist PACA-CA 0.68 0.7 0 0 0.64 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 4 33366781 190464296 1 6 114 6 0 0 0 0 0 1 3 0 0 NA NA NA 5 3 5 12.87 0.05 99.85 1 2 1 Whitelist PACA-CA 0.04 1 0 0 0.03 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 12 0.05 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 5 83393353 148744535 1 3 114 3 0 0 0 0 0.03 0.12 4 0 0 4 4 4 5 5 5 12.87 16.59 83.26 0 1 2 Whitelist PACA-CA 0.41 0.31 0 0 0.33 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 6 23801112 50666866 1 2 114 2 0 0 0 0 0.11 0.33 4 0 0 4 4 4 7 7 7 12.87 0.43 99.43 0 1 2 Whitelist PACA-CA 0.54 0.58 0 0 0.48 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 7 10986980 118966103 1 6 114 4 0 0 2 0 0.06 0.21 10 0 0 10 4 5 15 4 6 12.87 90.78 8.97 0 2 3 Whitelist PACA-CA 0.54 0.44 0 0 0.48 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 12 0.05 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 8 39815701 41999430 3 3 114 0 0 2 1 0 0.3 0.67 5 0 0 5 5 5 10 7 7 12.87 28.08 68.5 0 1 0 Whitelist PACA-CA 0.62 0.87 0 0 0.59 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 9 19695786 35035657 1 3 114 2 0 0 1 0 0.3 0.63 6 0 0 6 4 6 11 6 6 12.87 5.21 94.08 0 1 2 Whitelist PACA-CA 0.62 0.84 0 0 0.59 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 10 60331776 118726964 1 2 114 2 0 0 0 0 0.11 0.82 2 0 0 NA NA NA 5 3 5 12.87 0.32 99.5 0 1 2 Whitelist PACA-CA 0.54 0.96 0 0 0.48 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 11 67416557 107549150 4 4 114 0 0 2 2 0 0.26 0 8 0 0 8 8 8 23 23 23 12.87 2.95 96.61 0 1 2 Whitelist PACA-CA 0.62 0 0 0 0.59 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 12 34713427 34767753 2 2 114 0 0 1 1 0 0.57 0.26 2 0 0 NA NA NA 11 11 11 12.87 14.53 81.73 0 1 2 Whitelist PACA-CA 0.68 0.5 0 0 0.64 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 13 42051012 77674839 5 5 114 0 1 2 2 0 0.53 0.29 12 0 0 12 12 12 13 13 13 12.87 15.16 84.84 0 1 2 Whitelist PACA-CA 0.68 0.54 0 0 0.64 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 10 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 14 23945529 58897980 1 4 114 4 0 0 0 0 0.01 0.78 3 0 0 NA NA NA NA NA NA 12.87 8.8 90.31 0 2 1 Whitelist PACA-CA 0.21 0.94 0 0 0.16 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 15 28070426 73690087 6 6 114 2 0 2 2 0 0.57 0 11 0 0 11 11 11 17 17 17 12.87 2.95 97.05 0 2 1 Whitelist PACA-CA 0.68 0 0 0 0.64 1 High confidence PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 16 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 17 7378944 79228757 1 5 114 3 0 0 0 2 0.03 0.24 7 0.03 0 7 4 4 8 5 5 12.87 21.5 73.04 1 1 2 Whitelist PACA-CA 0.62 0.48 0.03 0 0.33 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 18 22352641 76788565 2 4 114 1 1 0 0 2 0.57 0.55 2 0 0 NA NA NA NA NA NA 12.87 55 44.94 0 1 2 Whitelist PACA-CA 17 1 0.78 0 0 0.64 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 19 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 20 33386791 33445711 1 1 114 1 0 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 12.87 21.56 71.44 0 2 NA Whitelist PACA-CA 0.62 0.91 NA NA 0.59 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 21 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 22 29329286 44093408 1 4 114 1 0 0 1 2 0.57 0.05 6 0 0 6 6 6 7 7 7 12.87 1.24 98.76 0 1 2 Whitelist PACA-CA 1 0.16 0 0 0.64 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0023 X 26630973 74895530 1 4 114 3 0 0 1 0 0.11 0.83 4 0 0 4 4 4 5 5 5 12.87 0.34 99.44 0 1 2 Whitelist PACA-CA 0.54 0.97 0 0 0.48 1 No PACA-CA PCSI_0023 PACA 0.27 1.96 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35216 PCSI_0023 female deceased C25 combined chemo+radiation therapy complete response 63 857 857 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 28.19 PACA-CA::PCSI_0024 1 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 2 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 3 NA NA 0 0 24 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.88 NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 6 NA NA 0 0 24 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.01 0 NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 7 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 8 33042176 71781996 1 1 24 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA 5 0 3 26.36 69.27 30.73 0 2 3 Whitelist PACA-CA 0.62 0.31 NA NA 0.59 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 2 0.04 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 9 32538144 35427918 2 4 24 1 0 0 1 2 0.57 0 7 0 0 7 3 3 18 5 5 26.36 43.01 56.31 0 3 2 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 6 0.12 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 10 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 11 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 12 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 13 NA NA 0 0 24 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.42 NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 18 2510329 11827416 3 3 24 0 1 1 1 0 0.8 0 4 0 0 4 3 4 8 4 4 26.36 92.02 7.97 4 4 3 Whitelist PACA-CA 0.87 0 0 0 0.84 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 6 0.12 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0024 X 103620921 103641854 1 1 24 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 26.36 0 99.77 0 2 NA Whitelist PACA-CA 0.62 0.59 NA NA 0.59 0 No PACA-CA PCSI_0024 PACA 0.27 1.86 Panc-AdenoCA NA 2 0.04 NA 1 PACA-CA DO35138 PCSI_0024 female deceased C25.1/C25.2 chemotherapy complete response 69 247 247 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 8.12 PACA-CA::PCSI_0044 1 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 2 NA NA 0 0 98 0 0 0 0 0 NA 0.85 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.99 0 NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 3 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 4 NA NA 0 0 98 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 5 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 6 2763282 35849850 10 10 98 1 4 2 3 0 0.57 0 18 0 0 18 5 8 36 5 10 24.72 90.66 6.5 1 2 1 Whitelist PACA-CA 0.68 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA With other complex events 20 0.1 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 7 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 8 1617743 120520106 4 4 98 0 1 1 2 0 0.57 0.82 6 0.23 0 6 3 5 7 3 3 24.72 93.56 3.02 0 1 2 Whitelist PACA-CA 0.68 0.96 0.23 0 0.64 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 9 35707967 35722401 1 1 98 0 0 1 0 0 0.39 0.06 2 0 NA NA NA NA 17 5 5 24.72 37.5 61.83 0 8 69 Whitelist PACA-CA 0.62 0.18 0 NA 0.59 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 10 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 11 132579748 132745201 1 1 98 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 24.72 0.12 99.45 0 2 3 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 12 46852610 65968411 9 28 98 3 2 4 0 19 0.27 0 22 0 0 22 5 8 30 5 5 24.72 38.24 58.01 0 2 3 Whitelist PACA-CA 18 0.68 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA With other complex events 37 0.19 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 13 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 14 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 15 NA NA 0 0 98 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 16 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 17 32633018 68283511 1 3 98 0 0 1 2 0 0.3 0.75 1 0 0 NA NA NA NA NA NA 24.72 27.34 68.22 0 2 NA Whitelist PACA-CA 0.62 0.92 0 0 0.59 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 18 42542834 54212829 15 28 98 1 5 5 4 13 0.41 0 30 0 0 30 6 10 42 6 6 24.72 80.22 19.74 0 1 8 Whitelist PACA-CA 12 0.68 0 0 0 0.62 0 Low confidence PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA With other complex events 43 0.22 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 19 NA NA 0 0 98 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 20 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 21 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 22 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0044 X NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0044 PACA 0.68 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578404_T_A,CN:1 2 PACA-CA DO35144 PCSI_0044 male deceased C25.0 chemotherapy disease progression 69 311 311 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0046 1 NA NA 0 0 64 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.73 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 2 9470737 10020271 1 2 64 2 0 0 0 0 0.11 0.37 3 0 0 NA NA NA 5 5 5 64.85 99.9 0 0 4 3 Whitelist PACA-CA 0.54 0.62 0 0 0.48 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 4 0.03 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 3 166322471 181952222 17 17 64 2 6 6 3 0 0.39 0 11 0 0 11 3 6 13 3 4 64.85 52.49 44.34 15 3 7 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 34 0.27 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 4 NA NA 0 0 64 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.69 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 5 78545451 78603362 2 2 64 0 0 0 2 0 0.11 0.8 2 0 0 NA NA NA 6 6 6 64.85 28.14 69.2 0 2 4 Whitelist PACA-CA 0.54 0.95 0 0 0.48 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 4 0.03 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 6 118359583 118372406 1 1 64 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 64.85 99.76 0 0 3 NA Whitelist PACA-CA 0.62 0.4 NA NA 0.59 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 2 0.02 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 7 22073849 24959566 3 3 64 1 1 1 0 0 0.8 0 4 0 0 4 0 3 11 5 5 64.85 99.77 0 0 5 6 Whitelist PACA-CA 0.87 0 0 0 0.84 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 6 0.05 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 8 34171312 37630056 3 6 64 0 1 2 0 3 0.3 0.02 4 0 0 4 4 4 10 6 6 64.85 99.99 0 0 4 5 Whitelist PACA-CA 0.62 0.07 0 0 0.59 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 9 0.07 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 9 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 10 13397914 37863494 2 2 64 1 1 0 0 0 0.57 0 4 0 0 4 4 4 20 6 13 64.85 37.2 62.63 0 3 4 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 4 0.03 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 11 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 12 NA NA 0 0 64 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 13 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 14 NA NA 0 0 64 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 15 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 16 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 17 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 18 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 19 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 20 3337519 20414311 2 3 64 0 1 1 0 1 0.57 0.05 3 0 0 NA NA NA 5 4 4 64.85 66.17 32.85 0 2 3 Whitelist PACA-CA 0.87 0.16 0 0 0.64 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 5 0.04 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 21 NA NA 0 0 64 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.77 NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 22 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0046 X NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0046 PACA 0.74 3.1 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:2 6 PACA-CA DO35424 PCSI_0046 male deceased C25.0 chemotherapy complete response 74 575 575 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 18.91 PACA-CA::PCSI_0047 1 26945930 26956012 1 1 41 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 76.58 96.7 0 0 4 NA Whitelist PACA-CA 0.62 0.63 NA NA 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 2 0.02 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 2 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 3 60084913 189564544 1 4 41 1 2 0 1 0 0.57 0.21 8 0 0 8 4 8 9 4 4 76.58 55.89 43.99 0 2 3 Whitelist PACA-CA 0.68 0.43 0 0 0.64 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 8 0.1 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 4 95567689 95709611 1 1 41 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 3 76.58 99.98 0 0 3 4 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 2 0.02 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 5 98850568 164303377 1 3 41 1 0 0 2 0 0.3 0.74 7 0 0 7 7 7 11 8 11 76.58 42.2 57.67 0 4 2 Whitelist PACA-CA 0.62 0.91 0 0 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 6 0.07 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 6 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 7 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 8 42548847 144014506 1 3 41 0 0 1 1 1 0.57 0.06 8 0 0 8 4 6 10 4 6 76.58 68.99 27.14 0 2 5 Whitelist PACA-CA 0.62 0.18 0 0 0.64 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 5 0.06 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 9 NA NA 0 0 41 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 14 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0 0 NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 10 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 11 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 12 13188706 75371370 1 2 41 1 1 0 0 0 0.57 0.12 5 0.02 0 5 5 5 8 5 5 76.58 43.35 52.97 3 5 4 Whitelist PACA-CA 0.68 0.31 0.02 0 0.64 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 4 0.05 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 13 NA NA 0 0 41 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.86 NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 14 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 15 56406859 56950237 1 1 41 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 76.58 84.59 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 2 0.02 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 16 NA NA 0 0 41 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.26 NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 17 NA NA 0 0 41 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.55 NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 18 21557291 35269113 4 4 41 0 0 2 2 0 0.26 0 10 0 0 10 0 3 13 3 3 76.58 38.11 61.68 0 2 4 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 8 0.1 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 19 1269402 49639845 1 4 41 2 1 0 0 1 0.3 0.01 5 0 0 5 3 5 5 3 5 76.58 92.72 0 0 3 4 Whitelist PACA-CA 0.68 0.04 0 0 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 7 0.09 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 20 17825132 17894447 1 1 41 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 76.58 92.99 0 0 4 NA Whitelist PACA-CA 0.62 0.81 NA NA 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 2 0.02 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 21 36649801 38160654 1 1 41 0 0 0 1 0 0.39 0.4 3 NA NA NA NA NA 6 6 6 76.58 77.35 0 0 4 3 Whitelist PACA-CA 0.62 0.64 NA NA 0.59 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 2 0.02 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 22 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0047 X NA NA 0 0 41 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0047 PACA 0.39 3.57 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO35406 PCSI_0047 male deceased C25.0/C25.9 combined chemo+radiation therapy unknown 54 160 160 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 5.26 PACA-CA::PCSI_0048 1 27127223 57406067 1 2 119 0 0 0 1 1 0.39 0.73 2 0 NA NA NA NA 7 4 7 33.8 27.93 68.71 0 1 2 Whitelist PACA-CA 0.68 0.91 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 3 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 2 9339132 232912332 1 7 119 3 1 0 0 3 0.11 0.32 8 0 0 8 6 8 9 7 7 33.8 28.69 68.62 0 2 1 Whitelist PACA-CA 0.77 0.57 0 0 0.48 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 11 0.05 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 3 3120897 83846277 6 6 119 1 1 2 2 0 0.88 0 13 0 0 13 13 13 21 14 14 33.8 63.36 36.61 1 2 1 Whitelist PACA-CA 0.93 0 0 0 0.91 1 High confidence PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 4 NA NA 0 0 119 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.99 0 NA NA 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 5 22231812 171733098 1 6 119 2 1 0 0 3 0.3 1 5 0 0 5 3 5 6 3 3 33.8 21.97 77.9 0 3 1 Whitelist PACA-CA 0.68 1 0 0 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 9 0.04 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 6 1062895 1117806 1 1 119 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 33.8 57.33 42.52 0 1 2 Whitelist PACA-CA 0.62 1 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 7 120455455 145616144 1 1 119 1 0 0 0 0 0.39 0.69 2 0 NA NA NA NA 5 3 5 33.8 81.64 15.81 0 2 4 Whitelist PACA-CA 0.62 0.89 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 8 107454582 126892180 1 2 119 1 1 0 0 0 0.57 0.84 2 0 0 NA NA NA 4 0 0 33.8 57.84 38.6 0 4 5 Whitelist PACA-CA 0.68 0.97 0 0 0.64 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 9 34281068 91899224 1 1 119 0 0 0 1 0 0.39 0.63 2 NA NA NA NA NA 4 3 3 33.8 26.57 72.72 0 2 3 Whitelist PACA-CA 0.62 0.85 NA NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 10 45865154 88525129 1 3 119 0 2 0 0 1 0.11 0.82 4 0 0 4 3 4 6 4 6 33.8 40.26 59.57 0 1 2 Whitelist PACA-CA 0.62 0.96 0 0 0.48 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 5 0.02 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 11 85324594 134002566 3 3 119 1 2 0 0 0 0.3 0.07 2 0 0 NA NA NA 5 3 3 33.8 12.57 87 0 2 3 Whitelist PACA-CA 0.62 0.22 0 0 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 12 72180403 131158685 1 3 119 1 0 1 1 0 0.8 0.13 2 0 0 NA NA NA NA NA NA 33.8 16.61 83.31 1 1 2 Whitelist PACA-CA 0.87 0.32 0 0 0.84 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 13 98430983 98459238 1 1 119 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 33.8 0.02 85.82 0 0 2 Whitelist PACA-CA 0.62 0.42 NA NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 14 93759764 93780855 1 1 119 1 0 0 0 0 0.39 0.28 2 0 NA NA NA NA 5 5 5 33.8 8.64 72.65 0 1 2 Whitelist PACA-CA 0.62 0.53 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 15 75069116 75159926 1 1 119 0 1 0 0 0 0.39 0.39 1 0 NA NA NA NA 4 4 4 33.8 42.86 41.64 0 3 NA Whitelist PACA-CA 0.62 0.64 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 16 24542561 89280286 1 2 119 0 2 0 0 0 0.11 0.56 4 0 0 4 4 4 5 5 5 33.8 0.08 99.83 0 2 3 Whitelist PACA-CA 0.54 0.79 0 0 0.48 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 17 57892133 60240060 1 2 119 0 2 0 0 0 0.11 1 4 0 0 4 4 4 7 6 7 33.8 27.44 68.11 0 2 3 Whitelist PACA-CA 0.54 1 0 0 0.48 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 18 8728750 8780525 1 1 119 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 33.8 56.64 43.3 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 19 13196250 13227511 1 1 119 0 1 0 0 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 33.8 0 99.58 0 2 NA Whitelist PACA-CA 0.62 0.55 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 20 NA NA 0 0 119 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 21 30542380 30723662 1 1 119 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 33.8 76.62 0.38 0 1 2 Whitelist PACA-CA 0.62 0.87 NA NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 22 38044318 38159079 1 1 119 0 1 0 0 0 0.39 0.17 2 0 NA NA NA NA 4 3 3 33.8 5.16 71.06 0 2 3 Whitelist PACA-CA 0.62 0.38 0 NA 0.59 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0048 X NA NA 0 0 119 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.12 NA NA NA 1 No PACA-CA PCSI_0048 PACA 0.59 1.95 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35350 PCSI_0048 male deceased C25.0/C25.9 no treatment 76 146 146 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.8 PACA-CA::PCSI_0072 1 9343065 31983163 1 1 88 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 76.88 90.92 9.08 0 2 4 Whitelist PACA-CA 0.62 0.06 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 2 35940221 233991268 2 6 88 0 0 3 3 0 0.11 0.56 10 0 0 10 5 10 13 7 13 76.88 99.5 0.39 1 3 1 Whitelist PACA-CA 0.54 0.79 0 0 0.48 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 12 0.07 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 3 42873471 175511337 1 4 88 3 1 0 0 0 0.11 0.67 8 0 0 8 3 5 9 3 5 76.88 99.88 0.09 0 4 3 Whitelist PACA-CA 0.54 0.88 0 0 0.48 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 4 5558977 9966597 3 3 88 1 1 1 0 0 0.8 0.01 7 0 0 7 4 7 26 7 18 76.88 40.95 56.57 0 2 3 Whitelist PACA-CA 0.87 0.04 0 0 0.84 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 5 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 6 6437985 116855507 2 4 88 1 0 1 2 0 0.57 0.25 12 0 0 12 4 5 18 4 5 76.88 96.63 0.42 0 3 4 Whitelist PACA-CA 0.68 0.5 0 0 0.64 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 7 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 8 138729197 138978017 1 1 88 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 76.88 96.11 0 0 3 NA Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 9 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 10 22955752 132664980 1 4 88 2 2 0 0 0 0.26 1 8 0 0 8 5 8 9 5 5 76.88 99.89 0 0 3 1 Whitelist PACA-CA 0.62 1 0 0 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 11 4949488 32483996 5 5 88 3 0 1 1 0 0.28 0.61 8 0 0 8 5 8 12 5 5 76.88 99.57 0 0 4 3 Whitelist PACA-CA 0.62 0.82 0 0 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 12 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 13 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 14 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 15 26991365 27036845 1 1 88 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 76.88 0.04 99.86 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 16 78112527 78601385 2 2 88 2 0 0 0 0 0.11 0.09 4 0 0 4 3 4 12 3 6 76.88 97.68 2.31 0 3 2 Whitelist PACA-CA 0.54 0.24 0 0 0.48 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 17 54378242 54538760 1 2 88 1 0 0 0 1 0.39 1 3 NA NA NA NA NA 5 3 4 76.88 67.9 27.53 0 2 3 Whitelist PACA-CA 0.68 1 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 18 3860804 37436169 26 27 88 6 9 7 4 1 0.57 0 26 0 0 26 7 10 30 7 7 76.88 99.96 0 0 6 7 Whitelist PACA-CA 0.68 0 0 0 0.64 1 High confidence PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA With other complex events 53 0.3 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 19 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 20 NA NA 0 0 88 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 21 33629199 33659557 1 1 88 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 76.88 67.48 9.87 0 3 NA Whitelist PACA-CA 0.62 0.54 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 22 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0072 X 44882470 44970015 1 1 88 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 76.88 0 100 0 2 NA Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0072 PACA 0.45 3.07 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577141_T_C,CN:2 4 PACA-CA DO35258 PCSI_0072 male deceased C25.0/C25.9 chemotherapy stable disease 82 362 362 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.91 PACA-CA::PCSI_0073 1 NA NA 0 0 43 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.23 0 NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 2 NA NA 0 0 43 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 3 60368084 61176929 2 2 43 2 0 0 0 0 0.11 0.54 1 0 0 NA NA NA NA NA NA 21.37 0 99.89 0 2 NA Whitelist PACA-CA 0.54 0.77 0 0 0.48 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 4 NA NA 0 0 43 0 0 0 0 0 NA 0.21 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.44 0.02 NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 5 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 7 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 8 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 11 NA NA 0 0 43 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 0 NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 12 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 13 NA NA 0 0 43 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 14 106348086 106376743 1 1 43 1 0 0 0 0 0.39 0.05 1 0 NA NA NA NA NA NA NA 21.37 0 84.1 0 2 NA Whitelist PACA-CA 0.62 0.15 0 NA 0.59 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 17 57926965 58335817 1 1 43 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.37 27.33 68.22 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 18 35309078 35849250 4 8 43 1 2 1 0 4 0.57 0 1 0 0 NA NA NA NA NA NA 21.37 64.39 35.57 0 1 NA Whitelist PACA-CA 1 0 0 0 0.64 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 12 0.14 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 19 4005249 4056028 1 1 43 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 10 3 3 21.37 75.09 17.63 0 0 1 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 20 9027885 20914894 4 4 43 0 2 1 1 0 0.57 0 8 0 0 8 4 5 12 7 7 21.37 27.58 71.44 0 1 2 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 8 0.09 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0073 X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0073 PACA 0.7 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 1 PACA-CA DO35228 PCSI_0073 male alive C25.0 chemotherapy complete response 68 1819 1819 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.84 PACA-CA::PCSI_0074 1 5276389 73182629 1 2 37 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 7.41 12.34 87.66 0 1 2 Whitelist PACA-CA 0.54 1 NA 0 0.48 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 2 233475106 242197086 2 2 37 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 7.41 0.73 99.18 0 2 NA Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 3 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 4 81248845 81432773 1 1 37 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 7.41 0 99.98 0 2 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 5 NA NA 0 0 37 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 6 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 7 110609560 110811278 1 2 37 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 7.41 0.02 99.75 0 2 3 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 8 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 9 21714374 136272200 2 5 37 2 0 1 1 1 0.57 0 6 0 0 6 4 6 11 6 6 7.41 16.9 82.4 0 1 2 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 9 0.12 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 10 1206223 1218305 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.41 0 99.82 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 11 NA NA 0 0 37 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.89 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 12 24415380 97321385 1 3 37 3 0 0 0 0 0.03 0.25 4 0 0 4 4 4 5 5 5 7.41 1.11 98.81 0 1 2 Whitelist PACA-CA 0.41 0.49 0 0 0.33 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 6 0.08 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 15 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 16 78144835 79126537 1 3 37 3 0 0 0 0 0.03 0.08 3 0 0 NA NA NA NA NA NA 7.41 0.11 99.78 0 2 1 Whitelist PACA-CA 0.41 0.22 0 0 0.33 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 6 0.08 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 17 39544638 39987917 1 1 37 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 7.41 0.55 99.44 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 18 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 20 NA NA 0 0 37 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.41 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 21 NA NA 0 0 37 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.22 NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0074 X 87483987 154494705 1 3 37 3 0 0 0 0 0.03 0.04 2 0 0 NA NA NA NA NA NA 7.41 0.19 99.59 0 1 2 Whitelist PACA-CA 0.41 0.13 0 0 0.33 0 No PACA-CA PCSI_0074 PACA 0.92 1.92 Panc-AdenoCA NA 6 0.08 NA 2 PACA-CA DO35230 PCSI_0074 female deceased C25.0/C25.9 no treatment 52 263 263 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 8.65 PACA-CA::PCSI_0077 1 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 2 20251747 230294157 1 2 74 2 0 0 0 0 0.11 0.53 2 0.01 0 NA NA NA NA NA NA 32.29 14.41 85.48 1 1 2 Whitelist PACA-CA 0.54 0.76 0.01 0 0.48 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 3 144186096 190399424 1 4 74 2 1 1 0 0 0.57 0.82 3 0 0 NA NA NA NA NA NA 32.29 1.78 98.09 0 2 3 Whitelist PACA-CA 0.68 0.96 0 0 0.64 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 4 131380254 181019881 1 3 74 3 0 0 0 0 0.03 0.82 6 0 0 6 5 6 8 6 6 32.29 95.68 4.29 0 3 2 Whitelist PACA-CA 0.41 0.96 0 0 0.33 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 5 24565 119493167 1 3 74 0 1 0 2 0 0.3 0.63 3 0.04 0 NA NA NA NA NA NA 32.29 0.04 99.82 0 2 3 Whitelist PACA-CA 0.62 0.84 0.04 0 0.59 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 6 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 7 145084677 146888249 1 2 74 1 0 1 0 0 0.57 0.44 1 NA 0 NA NA NA NA NA NA 32.29 0 99.77 0 2 NA Whitelist PACA-CA 0.68 0.69 NA 0 0.64 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 8 36619014 56104746 5 5 74 1 1 2 1 0 0.9 0 15 0 0 15 5 7 17 6 8 32.29 53.4 43.07 2 1 2 Whitelist PACA-CA 0.93 0.02 0 0 0.92 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 9 32610603 37173324 8 10 74 2 1 3 2 2 0.8 0 19 0 0 19 5 6 22 5 6 32.29 99.83 0.02 0 6 3 Whitelist PACA-CA 0.62 0 0 0 0.84 0 Low confidence PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA With other complex events 18 0.12 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 10 862840 997603 1 1 74 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 32.29 0.1 99.72 0 1 2 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 11 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 12 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 13 NA NA 0 0 74 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 14 NA NA 0 0 74 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 15 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 16 75923165 77699263 9 10 74 2 3 2 2 1 0.95 0 5 0 0 5 0 3 6 0 4 32.29 15.95 83.95 3 1 3 Whitelist PACA-CA 0.96 0 0 0 0.97 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 19 0.13 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 17 41391263 42907143 2 2 74 0 1 0 1 0 0.57 0 6 0 0 6 0 3 14 4 5 32.29 64.32 31.23 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 18 6803844 24203012 11 11 74 2 3 4 2 0 0.8 0 18 0 0 18 5 6 18 5 5 32.29 93.28 0.91 1 1 4 Whitelist PACA-CA 0.87 0 0 0 0.84 0 Low confidence PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA With other complex events 22 0.15 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 19 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 20 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 21 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 22 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0077 X NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0077 PACA 0.56 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578496_T_A,CN:1 3 PACA-CA DO35290 PCSI_0077 male deceased C25.0 combined chemo+radiation therapy disease progression 65 673 673 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.14 PACA-CA::PCSI_0078 1 NA NA 0 0 101 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 2 190311173 190476586 1 1 101 0 1 0 0 0 0.39 0.05 1 0.03 NA NA NA NA NA NA NA 18.27 0 99.88 0 2 NA Whitelist PACA-CA 0.62 0.16 0.03 NA 0.59 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 3 128620879 128690612 1 1 101 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 18.27 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.05 NA NA 0.59 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 4 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 5 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 6 10724067 163192697 1 5 101 0 1 1 1 2 0.8 1 3 0 0 NA NA NA NA NA NA 18.27 0.03 99.83 0 2 3 Whitelist PACA-CA 0.93 1 0 0 0.84 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 8 0.04 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 7 99583226 99608528 1 1 101 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 9 4 6 18.27 44.75 55.11 0 3 4 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 8 30144994 62631620 1 2 101 0 1 1 0 0 0.57 0.65 3 0 0 NA NA NA 6 4 4 18.27 27.09 72.8 0 2 3 Whitelist PACA-CA 0.68 0.86 0 0 0.64 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 9 NA NA 0 0 101 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 10 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 0 NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 10 83683215 94246039 1 2 101 0 2 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 18.27 0.13 99.7 0 2 3 Whitelist PACA-CA 0.54 0.59 NA 0 0.48 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 11 NA NA 0 0 101 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.59 NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 12 23107173 24520998 1 6 101 0 0 2 1 3 0.3 0.15 8 0 0 8 4 6 11 4 7 18.27 11.94 87.97 0 7 6 Whitelist PACA-CA 0.68 0.35 0 0 0.59 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 9 0.04 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 13 56986731 60457131 1 2 101 1 1 0 0 0 0.57 0.59 2 NA 0 NA NA NA NA NA NA 18.27 100 0 0 3 4 Whitelist PACA-CA 0.68 0.81 NA 0 0.64 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 14 46253342 46647800 1 1 101 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA 7 7 7 18.27 4.73 94.36 0 2 3 Whitelist PACA-CA 0.62 0.33 0 NA 0.59 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 15 NA NA 0 0 101 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 16 NA NA 0 0 101 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.92 NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 17 56410422 57856902 1 2 101 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 6 6 18.27 27.8 67.77 0 1 2 Whitelist PACA-CA 0.54 1 NA 0 0.48 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 18 49556708 77332270 7 8 101 0 1 2 4 1 0.17 0 15 0 0 15 4 7 19 5 5 18.27 63.11 31.95 1 2 1 Whitelist PACA-CA 0.62 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA With other complex events 15 0.07 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 19 30885443 31220357 2 2 101 1 1 0 0 0 0.57 0 5 0 0 5 0 3 30 3 3 18.27 17.61 82.22 0 38 40 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 20 NA NA 0 0 101 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 21 17071469 20214848 1 2 101 2 0 0 0 0 0.11 0.13 5 0 0 5 4 5 7 5 5 18.27 64.86 12.4 0 2 3 Whitelist PACA-CA 0.54 0.32 0 0 0.48 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 22 NA NA 0 0 101 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.12 0 NA NA 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0078 X 21775470 57170356 1 2 101 1 1 0 0 0 0.57 0.49 4 NA 0 4 3 4 6 3 3 18.27 33.73 62.29 3 2 1 Whitelist PACA-CA 0.68 0.74 NA 0 0.64 0 No PACA-CA PCSI_0078 PACA 0.7 2.14 Panc-AdenoCA NA 4 0.02 frameshift_deletion,17_7573999_-_T,CN:1 2 PACA-CA DO35126 PCSI_0078 female deceased C25.7 no treatment 55 280 280 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.21 PACA-CA::PCSI_0080 1 150608705 195995800 2 7 138 2 2 2 0 1 0.57 0 15 0 0 15 4 5 34 8 12 60.53 18.19 81.81 0 6 2 Whitelist PACA-CA 0.68 0.02 0 0 0.64 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 13 0.05 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 2 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 3 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 4 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 5 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 6 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 7 91083041 151977615 1 4 138 1 1 0 1 1 0.8 0.71 11 0 0 11 3 4 12 3 3 60.53 64.08 35.69 0 2 4 Whitelist PACA-CA 0.68 0.9 0 0 0.84 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 7 0.03 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 8 88500604 88704236 1 1 138 0 0 0 1 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 60.53 39.53 60.46 0 4 NA Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 9 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 10 21980440 83771959 1 2 138 1 0 0 1 0 0.57 0.22 4 0 0 4 3 4 5 3 3 60.53 83.66 16.18 0 4 2 Whitelist PACA-CA 0.68 0.45 0 0 0.64 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 11 50005797 50282900 1 2 138 0 0 1 1 0 0.57 0.1 1 NA 0 NA NA NA NA NA NA 60.53 99.57 0 0 4 NA Whitelist PACA-CA 0.68 0.27 NA 0 0.64 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 12 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 13 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 14 30413585 56215054 2 5 138 0 1 0 1 3 0.57 0 5 0 0 5 0 3 17 4 5 60.53 91.51 4.78 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 7 0.03 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 15 46323229 67503083 39 39 138 9 11 10 9 0 0.96 0 38 0 0 38 8 8 48 8 8 60.53 44.03 55.87 0 4 2 Whitelist PACA-CA 0.98 0 0 0 0.98 1 High confidence PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA With other complex events 78 0.28 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 16 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 17 NA NA 0 0 138 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.41 NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 18 21816315 25129942 1 3 138 1 0 0 1 1 0.57 0.79 5 0 0 5 0 4 8 0 5 60.53 27.63 67.72 0 5 4 Whitelist PACA-CA 0.87 0.94 0 0 0.64 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 5 0.02 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 19 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 20 4789983 14503734 17 19 138 5 5 4 3 2 0.89 0 30 0 0 30 3 4 32 3 3 60.53 89.85 9.14 4 2 7 Whitelist PACA-CA 0.93 0 0 0 0.92 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 36 0.13 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 21 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 22 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0080 X 12066564 12091825 1 1 138 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 4 4 60.53 5.16 94.84 0 1 2 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0080 PACA 0.52 3.16 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578544_-_GCAGGGGAGTACT,CN:2 4 PACA-CA DO35305 PCSI_0080 male deceased C25.0 chemotherapy complete response 70 746 746 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.54 PACA-CA::PCSI_0081 1 14267303 14441247 1 1 195 1 0 0 0 0 0.39 0.11 1 0 NA NA NA NA 11 4 4 42.79 49.51 47.37 0 1 NA Whitelist PACA-CA 0.62 0.28 0 NA 0.59 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 2 NA NA 0 0 195 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 3 45166492 174510403 1 6 195 3 0 2 0 1 0.14 0.07 6 0 0 6 4 6 6 4 6 42.79 50.6 49.37 0 3 2 Whitelist PACA-CA 0.54 0.2 0 0 0.59 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 11 0.03 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 4 NA NA 0 0 195 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 0 NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 5 145519578 179491764 50 54 195 14 17 9 10 4 0.35 0 8 0 0 8 4 5 9 4 6 42.79 99.89 0 7 1 7 Whitelist PACA-CA 19 0.68 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA With other complex events 104 0.27 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 6 68002068 162300700 2 11 195 1 2 0 1 7 0.57 0.01 11 0 0 11 11 11 14 14 14 42.79 53.38 46.34 0 1 2 Whitelist PACA-CA 0.87 0.04 0 0 0.64 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 15 0.04 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 7 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 8 NA NA 0 0 195 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.67 0 NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 9 21525751 35476871 1 7 195 3 0 0 1 3 0.11 0.35 14 0 0 14 3 5 15 3 5 42.79 22.68 76.62 0 2 1 Whitelist PACA-CA 0.54 0.61 0 0 0.48 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 11 0.03 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 10 71069103 110302288 1 2 195 0 0 0 1 1 0.39 0.3 2 0 NA NA NA NA 6 6 6 42.79 49.62 46.99 0 1 2 Whitelist PACA-CA 6 0.68 0.55 0 NA 0.59 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 3 0.01 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 11 110931721 119428341 1 1 195 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 42.79 6.29 93.28 0 1 2 Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 12 NA NA 0 0 195 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.01 NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 13 NA NA 0 0 195 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.07 NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 14 63182161 63221021 1 1 195 1 0 0 0 0 0.39 0.41 2 0 NA NA NA NA 6 6 6 42.79 6.32 92.76 0 1 2 Whitelist PACA-CA 0.62 0.66 0 NA 0.59 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 15 37486787 56672611 1 3 195 1 0 1 1 0 0.8 0.51 1 0 0 NA NA NA 5 5 5 42.79 87.53 12.38 0 1 NA Whitelist PACA-CA 0.87 0.75 0 0 0.84 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 6 0.02 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 16 NA NA 0 0 195 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 17 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 18 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 19 33279297 57149843 1 7 195 4 0 1 0 2 0.04 0 15 0 0 15 6 8 16 6 8 42.79 14.57 85.26 0 4 8 Whitelist PACA-CA 0.47 0 0 0 0.36 1 Linked to low confidence PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA With other complex events 12 0.03 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 20 5377429 36576271 20 20 195 6 5 5 4 0 0.94 0 31 0 0 31 5 13 35 5 8 42.79 40.6 52.19 24 2 3 Whitelist PACA-CA 0.96 0 0 0 0.96 1 Low confidence PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA With other complex events 40 0.1 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 21 NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 22 17339868 50561700 34 34 195 5 10 10 9 0 0.57 0 63 0 0 63 7 14 63 7 14 42.79 89.63 8.92 12 1 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 High confidence PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA With other complex events 68 0.17 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0081 X NA NA 0 0 195 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0081 PACA 0.85 1.65 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7577594_-_AC,CN:1 1 PACA-CA DO35222 PCSI_0081 male deceased C25.0 chemotherapy complete response 53 1234 1234 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.59 PACA-CA::PCSI_0082 1 49636122 49681420 1 1 160 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 69.93 99.98 0.02 0 2 3 Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 2 135939603 223773987 3 6 160 1 1 1 0 3 0.8 1 1 0 0 NA NA NA 6 5 5 69.93 99.72 0.18 0 4 NA Whitelist PACA-CA 0.93 1 0 0 0.84 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 9 0.03 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 3 59744433 185036636 1 9 160 3 2 1 1 2 0.67 0.64 7 0 0 7 3 5 8 3 5 69.93 21.07 78.79 0 2 0 Whitelist PACA-CA 0.62 0.85 0 0 0.74 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 16 0.05 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 4 91281356 91495335 1 1 160 1 0 0 0 0 0.39 0.15 2 0 NA NA NA NA 5 3 3 69.93 79.87 20.09 0 1 2 Whitelist PACA-CA 0.62 0.36 0 NA 0.59 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 5 95993718 96004837 1 1 160 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 69.93 99.88 0 0 3 NA Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 6 9933986 66038885 1 3 160 3 0 0 0 0 0.03 0.74 4 0 0 4 3 4 8 4 6 69.93 94.45 5.4 0 4 2 Whitelist PACA-CA 0.41 0.91 0 0 0.33 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 6 0.02 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 7 89947388 126684848 1 3 160 3 0 0 0 0 0.03 0.73 4 0 0 4 4 4 7 5 7 69.93 99.56 0.21 0 2 4 Whitelist PACA-CA 0.41 0.9 0 0 0.33 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 6 0.02 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 8 6295682 40937004 7 7 160 2 0 3 2 0 0.44 0.47 16 0 0 16 8 9 18 8 8 69.93 99.89 0 12 1 3 Whitelist PACA-CA 0.68 0.71 0 0 0.64 1 High confidence PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA With other complex events 14 0.04 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 9 9213018 9321156 2 2 160 2 0 0 0 0 0.11 0.42 2 0 0 NA NA NA 12 5 8 69.93 66.45 30.45 0 1 2 Whitelist PACA-CA 0.54 0.66 0 0 0.48 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 10 67372296 68876684 1 1 160 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA 4 4 4 69.93 10.05 89.77 0 1 2 Whitelist PACA-CA 0.62 0.5 NA NA 0.59 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 11 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 12 10809610 87566605 7 11 160 2 2 2 1 4 0.93 0 19 0 0 19 4 6 26 4 4 69.93 95.37 0.89 6 6 7 Whitelist PACA-CA 0.87 0 0 0 0.95 1 Low confidence PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA With other complex events 18 0.06 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 13 49520274 80403137 5 7 160 1 0 2 2 2 0.53 0 15 0 0 15 5 15 22 6 6 69.93 34.6 65.4 0 3 2 Whitelist PACA-CA 0.68 0.02 0 0 0.64 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 12 0.04 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 14 106348225 106358343 1 1 160 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 69.93 84.08 0 0 3 NA Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 15 24787651 83491899 4 6 160 1 2 0 1 2 0.57 0.01 11 0 0 11 8 8 13 9 9 69.93 99.9 0 0 1 3 Whitelist PACA-CA 0.68 0.06 0 0 0.64 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 10 0.03 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 16 7095949 87854086 21 21 160 6 1 6 8 0 0.16 0 41 0 0 41 32 32 46 32 32 69.93 52.6 47.08 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA Canonical without polyploidization 42 0.13 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 17 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 18 1716536 32009794 17 18 160 3 8 2 4 1 0.18 0 36 0 0 36 5 13 39 5 5 69.93 93.23 2.11 0 8 4 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA With other complex events 35 0.11 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 19 NA NA 0 0 160 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 20 14708169 15025989 2 2 160 2 0 0 0 0 0.11 0.59 4 0 0 4 0 3 7 3 3 69.93 98.88 0.15 0 0 1 Whitelist PACA-CA 0.54 0.81 0 0 0.48 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 21 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 22 17065631 26569132 1 2 160 2 0 0 0 0 0.11 0.44 7 NA 0 7 3 5 7 3 3 69.93 6.22 93.78 0 2 6 Whitelist PACA-CA 0.54 0.69 NA 0 0.48 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0082 X 56213159 127921701 1 2 160 1 0 0 1 0 0.57 0.03 5 NA 0 5 3 5 6 4 6 69.93 59.77 36.84 0 4 2 Whitelist PACA-CA 0.68 0.1 NA 0 0.64 1 No PACA-CA PCSI_0082 PACA 0.67 2.94 Panc-AdenoCA NA 4 0.01 stopgain,17_7578263_A_G,CN:2 3 PACA-CA DO35128 PCSI_0082 female deceased C25.0 chemotherapy unknown 83 361 361 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0084 1 3235032 244173982 1 5 33 1 2 0 0 2 0.3 0.04 7 0 0 7 3 6 8 3 5 24.48 70.51 29.49 0 3 2 Whitelist PACA-CA 0.62 0.14 0 0 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 8 0.12 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 2 217634870 217804358 1 1 33 0 1 0 0 0 0.39 0.75 2 NA NA NA NA NA 4 3 3 24.48 57.61 42.29 0 3 4 Whitelist PACA-CA 0.62 0.92 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 3 NA NA 0 0 33 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.75 NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 4 185101982 185566913 1 2 33 2 0 0 0 0 0.11 0.28 3 0 0 NA NA NA 5 3 3 24.48 23.66 76.33 0 1 0 Whitelist PACA-CA 0.54 0.52 0 0 0.48 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 4 0.06 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 5 27578047 27692362 1 1 33 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 24.48 15.24 84.62 0 3 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 6 162527700 162772311 1 1 33 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 3 24.48 29.79 70.06 0 1 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 7 NA NA 0 0 33 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.89 NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 8 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 9 9484352 9523035 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.48 0.03 99.3 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 12 118495169 118519449 1 1 33 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.48 0 99.92 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 16 6334828 6773933 1 2 33 2 0 0 0 0 0.11 0.06 4 0.16 0 4 4 4 5 5 5 24.48 0.33 99.56 0 1 2 Whitelist PACA-CA 0.54 0.18 0.16 0 0.48 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 4 0.06 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 18 48187960 48634803 1 1 33 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 4 3 3 24.48 65.98 33.96 0 0 1 Whitelist PACA-CA 0.62 0.45 NA NA 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 2 0.03 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 20 40906299 57462013 8 9 33 4 2 1 1 1 0.39 0 1 0 0 NA NA NA 4 4 4 24.48 33.11 65.93 1 3 NA Whitelist PACA-CA 0.68 0 0 0 0.59 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 17 0.26 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0084 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0084 PACA 0.78 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35198 PCSI_0084 female deceased C25.0 chemotherapy complete response 70 463 463 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.23 PACA-CA::PCSI_0086 1 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 2 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 3 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 4 62789059 179683069 2 2 23 0 1 0 1 0 0.57 0.66 4 NA 0 4 4 4 5 5 5 13.44 56.54 43.45 1 1 2 Whitelist PACA-CA 0.68 0.87 NA 0 0.64 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 4 0.09 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 5 63254069 109286710 2 2 23 1 0 0 1 0 0.57 0.65 1 NA 0 NA NA NA NA NA NA 13.44 0 99.86 0 2 NA Whitelist PACA-CA 0.68 0.86 NA 0 0.64 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 4 0.09 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 6 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 7 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 8 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 9 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 10 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 11 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 12 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 14 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 15 NA NA 0 0 23 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 16 6348126 6610770 1 1 23 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 13.44 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.71 NA NA 0.59 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 17 NA NA 0 0 23 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.71 NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 18 1082109 77329138 7 7 23 0 2 3 2 0 0.44 0 7 0 0 7 5 7 8 5 5 13.44 7.67 86.32 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA Canonical without polyploidization 14 0.3 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 19 35613661 42321049 1 4 23 1 0 1 0 2 0.57 0 2 0 0 NA NA NA 8 3 3 13.44 2.48 97.34 0 2 4 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 6 0.13 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0086 X NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0086 PACA 0.55 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578199_C_A,CN:1 2 PACA-CA DO35132 PCSI_0086 male deceased C25.2 no treatment 69 90 90 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 2.96 PACA-CA::PCSI_0096 1 8860088 8879164 1 1 24 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 13.85 54.4 45.6 0 1 NA Whitelist PACA-CA 0.62 0.68 NA NA 0.59 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 2 87467420 105943240 1 1 24 0 0 1 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 13.85 0 99.9 0 2 NA Whitelist PACA-CA 0.62 0.33 NA NA 0.59 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 3 193671 110891450 1 2 24 1 1 0 0 0 0.57 0.08 6 0.21 0.05 6 3 4 7 3 5 13.85 49 50.95 0 2 1 Whitelist PACA-CA 0.68 0.24 0.21 0.05 0.64 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 4 0.08 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 4 NA NA 0 0 24 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.88 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 6 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 7 39746914 122917914 1 2 24 1 1 0 0 0 0.57 0.14 2 NA 0 NA NA NA NA NA NA 13.85 1.67 98.11 0 1 2 Whitelist PACA-CA 0.68 0.33 NA 0 0.64 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 4 0.08 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 8 NA NA 0 0 24 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.6 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 9 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 10 58332674 108141940 1 3 24 2 0 0 1 0 0.3 0.1 4 0 0 4 4 4 5 5 5 13.85 29.84 69.98 0 1 2 Whitelist PACA-CA 0.62 0.26 0 0 0.59 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 6 0.12 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 11 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 12 114535665 128411360 2 2 24 1 0 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 13.85 0.1 99.82 0 2 NA Whitelist PACA-CA 0.68 0.02 0 0 0.64 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 4 0.08 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 13 56095891 56115973 1 1 24 0 1 0 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 13.85 0 100 0 2 NA Whitelist PACA-CA 0.62 0.79 NA NA 0.59 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 14 NA NA 0 0 24 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.39 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 17 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 19 NA NA 0 0 24 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.23 NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 20 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0096 X 94934209 94945538 1 1 24 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.85 100 0 0 1 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0096 PACA 0.87 1.91 Panc-AdenoCA NA 2 0.04 NA 2 PACA-CA DO35360 PCSI_0096 male alive C25.1/C25.2 chemotherapy complete response 65 2387 2387 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 78.52 PACA-CA::PCSI_0098 1 15583366 15856023 1 1 69 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA 6 6 6 24.93 1.21 98.79 0 2 4 Whitelist PACA-CA 0.62 0.15 NA NA 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 2 NA NA 0 0 69 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.11 NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 3 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 4 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 5 1975072 45877208 2 2 69 0 0 1 1 0 0.57 0.33 3 NA 0.04 NA NA NA NA NA NA 24.93 0 97.21 0 2 4 Whitelist PACA-CA 0.68 0.58 NA 0.04 0.64 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 4 0.03 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 6 44980259 104426066 7 10 69 1 2 1 3 3 0.67 0 3 0 0 NA NA NA 6 5 5 24.93 48.59 48.57 0 2 3 Whitelist PACA-CA 0.96 0 0 0 0.74 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 17 0.12 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 7 49086884 49790869 1 1 69 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 3 5 24.93 29.38 70.4 12 1 2 Whitelist PACA-CA 0.62 0.05 0 NA 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 8 95667433 131300949 3 3 69 0 2 1 0 0 0.3 0.17 1 0 0 NA NA NA NA NA NA 24.93 0.08 99.89 0 2 NA Whitelist PACA-CA 0.62 0.38 0 0 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 6 0.04 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 9 106756716 110175383 3 7 69 0 1 2 3 1 0.34 0 7 0 0 7 3 5 12 3 5 24.93 64.42 32.47 0 2 3 Whitelist PACA-CA 0.77 0 0 0 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 13 0.09 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 10 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 11 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 12 40500570 56167941 5 8 69 0 1 2 2 3 0.53 0 10 0 0 10 4 6 18 4 7 24.93 86.04 10.22 5 1 4 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 13 0.09 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 13 34086145 34276331 1 1 69 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 24.93 14.15 82.2 0 2 NA Whitelist PACA-CA 0.62 0.91 NA NA 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 14 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 15 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 16 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 17 56288695 72974757 1 1 69 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 4 4 24.93 95.55 0 0 1 3 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 18 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 19 5516513 36566767 2 5 69 0 1 1 0 3 0.57 0 4 0 0 4 3 4 8 3 4 24.93 18.61 81.21 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 7 0.05 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 20 NA NA 0 0 69 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 21 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 22 NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0098 X NA NA 0 0 69 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0098 PACA 0.21 1.78 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578430_-_TG,CN:1 1 PACA-CA DO35184 PCSI_0098 male deceased C25.0 no treatment 75 102 102 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.36 PACA-CA::PCSI_0099 1 103388184 244327208 1 2 57 2 0 0 0 0 0.11 0.45 8 0 0 8 3 5 13 3 3 71.71 82.38 14.65 1 5 4 Whitelist PACA-CA 0.54 0.7 0 0 0.48 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 4 0.04 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 2 NA NA 0 0 57 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.25 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 3 30650649 155287782 1 3 57 2 0 0 0 1 0.11 0.06 10 0 0 10 4 6 12 4 6 71.71 84.24 15.71 0 4 2 Whitelist PACA-CA 0.62 0.19 0 0 0.48 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 5 0.04 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 4 59593015 171878382 1 3 57 0 3 0 0 0 0.03 1 3 0 0 NA NA NA NA NA NA 71.71 99.9 0 0 3 4 Whitelist PACA-CA 0.41 1 0 0 0.33 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 6 0.05 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 5 1947686 62659691 1 4 57 0 2 1 0 1 0.3 0.09 7 0 0.04 7 4 7 14 5 5 71.71 73.45 26.44 0 7 2 Whitelist PACA-CA 0.68 0.25 0 0.04 0.59 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 7 0.06 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 6 47679256 48130289 2 3 57 1 0 1 0 1 0.57 0.16 4 0 0 4 0 3 7 0 5 71.71 37.04 62.72 3 3 4 Whitelist PACA-CA 0.87 0.36 0 0 0.64 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 5 0.04 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 7 48564155 102908414 1 2 57 1 0 1 0 0 0.57 0.03 6 0 0 6 3 4 12 3 4 71.71 73.67 26.28 0 4 6 Whitelist PACA-CA 0.68 0.12 0 0 0.64 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 4 0.04 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 8 34294147 34304977 1 1 57 0 0 0 1 0 0.39 0.07 2 0 NA NA NA NA 6 0 0 71.71 76.57 23.32 0 4 6 Whitelist PACA-CA 0.62 0.21 0 NA 0.59 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 9 1082550 36350034 1 3 57 0 3 0 0 0 0.03 0.49 7 0.01 0 7 3 6 11 3 4 71.71 24.07 73.39 2 4 6 Whitelist PACA-CA 0.41 0.73 0.01 0 0.33 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 6 0.05 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 10 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 11 8188698 99115957 1 3 57 1 1 0 0 1 0.57 0.75 5 NA 0 5 3 4 6 3 3 71.71 68.79 27.24 0 2 4 Whitelist PACA-CA 0.87 0.92 NA 0 0.64 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 5 0.04 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 12 121429800 121477762 1 1 57 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 71.71 99.92 0 0 3 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 14 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 15 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 16 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 18 NA NA 0 0 57 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 19 12418897 12470963 1 1 57 0 0 0 1 0 0.39 0.31 3 NA 0 NA NA NA 5 0 0 71.71 99.82 0 0 1 5 Whitelist PACA-CA 0.62 0.56 NA 0 0.59 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 20 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 22 21353187 42053810 1 3 57 2 1 0 0 0 0.3 0 6 0 0 6 3 4 9 4 4 71.71 17.05 82.95 0 7 2 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 6 0.05 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0099 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0099 PACA 0.94 3.65 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35116 PCSI_0099 female alive C25.0 no treatment 76 2017 2017 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 66.35 PACA-CA::PCSI_0101 1 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 2 28470079 28485352 1 1 202 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 24.53 0 99.9 0 2 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 3 30576168 88603943 1 3 202 2 0 0 0 1 0.11 0 3 NA 0 NA NA NA 4 3 3 24.53 43.74 56.22 0 0 1 Whitelist PACA-CA 0.41 0 NA 0 0.48 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 5 0.01 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 4 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 5 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 6 34740299 52126092 1 3 202 2 0 1 0 0 0.3 0.04 8 0 0 8 5 5 10 5 5 24.53 28.06 71.8 0 2 1 Whitelist PACA-CA 0.62 0.13 0 0 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 6 0.01 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 7 111513717 152373524 5 7 202 1 1 2 1 2 0.9 0.28 11 0 0 11 11 11 12 12 12 24.53 23.14 76.64 0 1 2 Whitelist PACA-CA 14 0.96 0.52 0 0 0.92 1 High confidence PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA Canonical without polyploidization 12 0.03 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 8 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 9 25827479 32065716 1 1 202 0 1 0 0 0 0.39 0.03 2 NA 0 NA NA NA NA NA NA 24.53 21.15 78.73 0 1 2 Whitelist PACA-CA 0.62 0.1 NA 0 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 10 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 11 65356964 91771047 4 4 202 1 1 1 1 0 1 0.51 7 0 0 7 7 7 10 10 10 24.53 33.93 65.64 0 2 1 Whitelist PACA-CA 1 0.75 0 0 1 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 8 0.02 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 12 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 13 49875725 60533319 1 1 202 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 24.53 9.25 76.59 0 2 3 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 14 20883702 106705001 32 88 202 9 5 8 10 56 0.63 0 60 0 0 60 18 34 60 18 18 24.53 35.81 48.72 1 2 1 Whitelist PACA-CA 7 0.87 0 0 0 0.7 1 High confidence PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA With other complex events 120 0.3 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 15 20557095 102195722 53 108 202 16 11 12 14 55 0.77 0 41 0 0 41 41 41 41 41 41 24.53 20.28 63.99 3 2 1 Whitelist PACA-CA 14 0.81 0 0 0 0.84 1 High confidence PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA Canonical without polyploidization 161 0.4 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 16 NA NA 0 0 202 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 17 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 18 19977732 20401564 1 1 202 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 3 24.53 73.77 20.3 2 2 3 Whitelist PACA-CA 0.62 0.41 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 19 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 0 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 20 45975659 56488413 1 1 202 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 24.53 16.68 82.3 0 2 3 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 21 25205646 25222804 1 1 202 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 24.53 77.43 0 0 1 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 22 17987673 43447488 22 22 202 2 7 5 8 0 0.28 0 30 0 0 30 4 7 31 4 6 24.53 92.69 7.31 0 1 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA With other complex events 44 0.11 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0101 X 121108549 121347712 1 1 202 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 24.53 100 0 0 1 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0101 PACA 0.21 1.76 Panc-AdenoCA NA 2 0 stopgain,17_7578275_A_G,CN:2 2 PACA-CA DO35085 PCSI_0101 male deceased C25.0 chemotherapy unknown 59 224 224 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.37 PACA-CA::PCSI_0104 1 72694825 237333439 11 14 107 4 2 3 2 3 0.8 0 19 0 0 19 14 19 22 14 14 6.8 37.56 62.44 0 2 3 Whitelist PACA-CA 0.81 0 0 0 0.84 1 High confidence PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA Canonical without polyploidization 25 0.12 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 2 184428299 206559523 2 2 107 0 0 1 1 0 0.57 0.01 4 NA 0 4 4 4 5 5 5 6.8 0.17 99.72 0 1 2 Whitelist PACA-CA 0.68 0.04 NA 0 0.64 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 3 29469364 84988049 2 2 107 0 0 2 0 0 0.11 0.71 1 0 0 NA NA NA NA NA NA 6.8 0 99.97 0 2 NA Whitelist PACA-CA 0.54 0.9 0 0 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 4 42227398 156834083 1 5 107 5 0 0 0 0 0 0.85 9 0 0 9 9 9 9 9 9 6.8 0.19 99.81 0 2 1 Whitelist PACA-CA 0.1 0.98 0 0 0.07 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 10 0.05 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 5 44879827 158748431 1 4 107 4 0 0 0 0 0.01 0.42 5 0 0 5 5 5 5 5 5 6.8 0.25 99.62 0 2 1 Whitelist PACA-CA 0.21 0.67 0 0 0.16 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 6 21289007 53527836 3 3 107 2 1 0 0 0 0.3 0.15 4 0 0 4 4 4 13 13 13 6.8 0.75 99.09 0 1 2 Whitelist PACA-CA 0.62 0.35 0 0 0.59 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 7 64829338 81946632 1 2 107 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 5 5 5 6.8 0.37 99.41 0 1 2 Whitelist PACA-CA 0.54 0.32 NA 0 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 8 113153193 113485123 2 2 107 0 0 1 1 0 0.57 0.66 3 0 0 NA NA NA 9 7 7 6.8 0.64 99.36 0 2 1 Whitelist PACA-CA 0.68 0.87 0 0 0.64 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 9 21823061 137868537 1 6 107 6 0 0 0 0 0 0.32 11 0 0 11 5 9 12 5 9 6.8 1.4 95.49 11 1 2 Whitelist PACA-CA 0.04 0.57 0 0 0.03 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 12 0.06 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 10 127321164 127342698 1 1 107 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.8 2.06 97.76 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 11 105923287 118216985 2 2 107 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 9 9 9 6.8 10.84 88.74 0 1 2 Whitelist PACA-CA 0.54 1 0 0 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 12 37997674 38296676 2 2 107 0 0 1 1 0 0.57 0.64 3 0 0 NA NA NA 7 3 3 6.8 14.48 81.78 0 2 4 Whitelist PACA-CA 0.68 0.85 0 0 0.64 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 13 31503822 31975365 1 1 107 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 6.8 0.41 99.59 0 1 2 Whitelist PACA-CA 0.62 0.52 NA NA 0.59 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 14 24790241 99931265 1 4 107 4 0 0 0 0 0.01 0.39 10 0 0 10 10 10 11 11 11 6.8 23.78 75.31 0 1 2 Whitelist PACA-CA 0.21 0.64 0 0 0.16 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 15 75906583 76022095 1 1 107 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 6.8 0 100 0 2 NA Whitelist PACA-CA 0.62 0.63 NA NA 0.59 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 16 7997899 50625037 1 2 107 2 0 0 0 0 0.11 1 4 NA 0.04 4 4 4 5 5 5 6.8 1.14 98.77 2 1 2 Whitelist PACA-CA 0.54 1 NA 0.04 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 17 2174585 33425891 1 4 107 3 0 0 1 0 0.11 0.54 5 0 0 5 5 5 5 5 5 6.8 0.95 99.04 0 2 1 Whitelist PACA-CA 0.54 0.77 0 0 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 18 4126494 66021548 1 5 107 5 0 0 0 0 0 0.22 10 0 0 10 7 10 11 8 8 6.8 51.31 48.66 0 1 2 Whitelist PACA-CA 0.1 0.45 0 0 0.07 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 10 0.05 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 19 2816472 38695729 1 2 107 2 0 0 0 0 0.11 1 4 NA 0.01 4 4 4 5 5 5 6.8 2.68 97.14 0 1 2 Whitelist PACA-CA 0.54 1 NA 0.01 0.48 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 20 3722371 19781295 3 3 107 2 1 0 0 0 0.3 0.3 5 0 0 5 5 5 7 7 7 6.8 4.49 94.52 0 2 1 Whitelist PACA-CA 0.62 0.54 0 0 0.59 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 6 0.03 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 21 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 22 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0104 X 64069465 64455152 4 4 107 0 1 1 2 0 0.57 0.07 2 0 0 NA NA NA 13 13 13 6.8 2.99 96.79 0 1 2 Whitelist PACA-CA 0.68 0.21 0 0 0.64 1 No PACA-CA PCSI_0104 PACA 0.85 1.97 Panc-AdenoCA NA 8 0.04 NA 2 PACA-CA DO35136 PCSI_0104 female alive C25.7 chemotherapy complete response 61 1620 1620 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.29 PACA-CA::PCSI_0105 1 48558249 196630605 1 2 91 2 0 0 0 0 0.11 0.05 5 NA 0 5 3 4 6 3 4 87.74 99.23 0.77 0 2 5 Whitelist PACA-CA 0.54 0.16 NA 0 0.48 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 2 56987556 57754391 1 1 91 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 87.74 99.56 0.32 0 2 4 Whitelist PACA-CA 0.62 0.03 NA NA 0.59 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 3 33556195 40791777 11 12 91 2 1 3 5 1 0.36 0 18 0 0 18 4 16 25 5 17 87.74 88.22 8.7 0 5 6 Whitelist PACA-CA 0.68 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA With other complex events 23 0.13 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 4 NA NA 0 0 91 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.12 NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 5 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 6 NA NA 0 0 91 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 0 NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 7 116757624 116789826 1 1 91 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 87.74 99.78 0 1 3 5 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 8 32293442 43487441 2 2 91 0 1 0 1 0 0.57 0.63 4 0 0 4 4 4 7 6 6 87.74 74.52 22.06 1 3 4 Whitelist PACA-CA 0.68 0.84 0 0 0.64 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 9 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 10 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 11 25093626 25143761 2 2 91 0 0 1 1 0 0.57 0.2 2 0 0 NA NA NA 6 0 3 87.74 96.21 0 0 5 7 Whitelist PACA-CA 0.68 0.43 0 0 0.64 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 12 82794906 82818808 2 2 91 1 0 0 1 0 0.57 0.8 1 0 0 NA NA NA 4 4 4 87.74 99.92 0 0 4 NA Whitelist PACA-CA 0.68 0.95 0 0 0.64 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 13 34326449 109417492 12 12 91 3 3 2 4 0 0.88 0 34 0 0 34 5 5 35 5 5 87.74 100 0 2 7 4 Whitelist PACA-CA 0.93 0 0 0 0.91 0 Low confidence PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA With other complex events 24 0.13 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 14 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 15 45024420 45210981 1 1 91 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 87.74 99.87 0 0 4 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 16 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 17 15139445 56326877 1 2 91 2 0 0 0 0 0.11 0.1 4 0 0 4 4 4 8 8 8 87.74 81.14 18.85 1 2 3 Whitelist PACA-CA 0.54 0.27 0 0 0.48 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 18 NA NA 0 0 91 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.56 NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 19 36979597 39194954 2 3 91 1 0 0 1 1 0.57 0 6 0 0 6 0 3 14 4 4 87.74 92.72 0 0 8 3 Whitelist PACA-CA 0.87 0.01 0 0 0.64 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 5 0.03 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 20 21994450 62650814 3 3 91 0 0 3 0 0 0.03 0 19 0 0 19 3 6 22 3 6 87.74 77.92 15.26 0 5 4 Whitelist PACA-CA 0.41 0 0 0 0.33 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 6 0.03 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 21 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 22 48155266 48502059 1 1 91 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 87.74 99.32 0.68 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0105 X 144149394 145235129 1 1 91 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 87.74 99.08 0.7 1 2 4 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0105 PACA 0.56 3.69 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7579315_C_-,CN:2 4 PACA-CA DO35236 PCSI_0105 female alive C25.1 chemotherapy complete response 58 1629 1629 Current smoker (includes daily smokers non-daily/occasional smokers) 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.59 PACA-CA::PCSI_0106 1 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 2 NA NA 0 0 48 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.68 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 3 196262546 196673735 2 4 48 0 1 0 1 2 0.57 0 2 0 0 NA NA NA 14 4 4 32.88 99.29 0.59 0 1 2 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 4 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 5 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 6 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 7 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 8 NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 9 34133640 36038916 3 3 48 1 1 1 0 0 0.8 0.04 4 0 0 4 4 4 6 6 6 32.88 31.78 65.66 26 1 2 Whitelist PACA-CA 0.87 0.14 0 0 0.84 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 10 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 12 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 13 45674963 48347716 1 3 48 2 1 0 0 0 0.3 0 7 0 0 7 0 3 12 3 3 32.88 85.72 0 7 3 4 Whitelist PACA-CA 0.62 0.01 0 0 0.59 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 15 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 17 NA NA 0 0 48 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 18 5705223 31344577 3 3 48 1 0 1 1 0 0.8 0.04 6 0 0 6 6 6 8 7 7 32.88 52.76 47.2 0 1 2 Whitelist PACA-CA 0.87 0.14 0 0 0.84 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 19 NA NA 0 0 48 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.48 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 22 33940890 42693812 5 10 48 1 2 1 1 5 0.9 0 7 0 0 7 4 7 12 5 5 32.88 51.26 24.96 1 1 2 Whitelist PACA-CA 0.68 0 0 0 0.92 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 15 0.16 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0106 X NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0106 PACA 0.34 1.8 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35148 PCSI_0106 female deceased C25.1 radiation therapy unknown 77 1013 1013 Current reformed smoker, duration not specified 18 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 33.32 PACA-CA::PCSI_0108 1 79583860 79616979 1 1 13 0 1 0 0 0 0.39 0.08 2 0 NA NA NA NA 5 3 3 26.63 99.98 0.01 0 1 2 Whitelist PACA-CA 0.62 0.22 0 NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 2 232805777 232852571 1 1 13 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.63 0 99.91 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 3 12644526 73435800 1 1 13 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 26.63 30.7 69.25 0 1 2 Whitelist PACA-CA 0.62 0.82 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 4 1689659 1770356 2 2 13 0 0 1 1 0 0.57 0.21 3 NA 0 NA NA NA NA NA NA 26.63 0.02 99.78 0 2 3 Whitelist PACA-CA 0.68 0.44 NA 0 0.64 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 4 0.15 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 7 157163936 157213979 1 1 13 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 26.63 0.03 99.74 0 2 3 Whitelist PACA-CA 0.62 0.75 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 8 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 9 9333794 9540964 1 2 13 2 0 0 0 0 0.11 0.09 3 NA 0 NA NA NA 4 3 3 26.63 33.49 63.96 0 1 0 Whitelist PACA-CA 0.54 0.25 NA 0 0.48 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 4 0.15 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 10 104529524 104673119 1 1 13 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 26.63 0.11 99.78 0 2 3 Whitelist PACA-CA 0.62 0.7 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 12 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 16 78488298 78503974 1 1 13 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 26.63 0.02 99.87 0 1 2 Whitelist PACA-CA 0.62 0.54 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 17 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0108 X 129117025 129174374 1 1 13 0 1 0 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 26.63 100 0 0 1 NA Whitelist PACA-CA 0.62 0.73 NA NA 0.59 0 No PACA-CA PCSI_0108 PACA 0.71 1.78 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO35330 PCSI_0108 male deceased C25.0 chemotherapy complete response 63 1359 1359 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.7 PACA-CA::PCSI_0109 1 26762810 183327285 1 5 72 1 2 0 0 2 0.3 0.83 6 0 0 6 5 6 7 5 5 25.11 0.49 99.51 0 2 3 Whitelist PACA-CA 0.62 0.97 0 0 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 8 0.06 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 2 215490791 215546153 2 2 72 0 0 1 1 0 0.57 0.52 4 0 0 4 3 4 9 7 9 25.11 0.16 99.75 0 2 3 Whitelist PACA-CA 0.68 0.76 0 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 4 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 3 62584785 62603413 1 1 72 0 1 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 25.11 23.36 73.56 0 1 NA Whitelist PACA-CA 0.62 0.48 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 4 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 5 85893924 85931663 1 1 72 0 1 0 0 0 0.39 0.63 2 NA NA NA NA NA NA NA NA 25.11 0.02 99.85 0 2 4 Whitelist PACA-CA 0.62 0.84 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 6 33569322 162734941 1 2 72 1 1 0 0 0 0.57 0.8 7 0 0 7 3 3 7 3 3 25.11 62.77 34.07 0 1 2 Whitelist PACA-CA 0.68 0.95 0 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 4 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 7 47916213 105653948 1 6 72 0 2 0 0 4 0.11 0.29 4 0 0 4 4 4 5 5 5 25.11 0.24 99.54 0 2 3 Whitelist PACA-CA 12 0.68 0.53 0 0 0.48 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 8 0.06 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 8 18468006 18534928 1 1 72 1 0 0 0 0 0.39 0.79 2 0 NA NA NA NA 4 3 3 25.11 29.35 70.64 0 0 1 Whitelist PACA-CA 0.62 0.94 0 NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 9 21854144 110368684 1 2 72 1 1 0 0 0 0.57 0.76 4 0.04 0 4 3 4 5 3 3 25.11 0.38 99.49 0 2 1 Whitelist PACA-CA 0.68 0.93 0.05 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 4 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 10 23986612 84725393 1 3 72 1 1 0 0 1 0.57 1 4 NA 0 4 4 4 4 4 4 25.11 27.99 68.59 0 1 2 Whitelist PACA-CA 0.62 1 NA 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 5 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 11 40784532 119595924 1 3 72 1 1 0 0 1 0.57 1 5 NA 0 5 3 3 6 3 3 25.11 49.08 50.49 0 3 1 Whitelist PACA-CA 0.62 1 NA 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 5 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 12 19102997 39509573 4 4 72 3 0 0 1 0 0.11 0 10 0 0 10 5 6 26 13 13 25.11 95.65 0.61 4 3 4 Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 8 0.06 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 13 48970873 49294102 2 2 72 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 9 9 9 25.11 78.54 7.31 0 1 2 Whitelist PACA-CA 0.68 0.27 0 0 0.64 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 4 0.03 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 15 59162369 59285110 1 1 72 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 25.11 0 84.42 0 2 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 16 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 17 8230398 8266742 1 1 72 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 25.11 0.04 99.95 0 2 4 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 18 43152955 43904877 1 1 72 0 1 0 0 0 0.39 0.45 1 NA NA NA NA NA 4 4 4 25.11 73.13 26.84 0 1 NA Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 19 NA NA 0 0 72 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.86 NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 20 20095838 50583265 1 4 72 0 2 1 0 1 0.3 0 5 0 0 5 4 5 10 5 5 25.11 68.78 31 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 7 0.05 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 22 29763846 29926849 1 1 72 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 4 5 25.11 11.07 65.15 0 2 3 Whitelist PACA-CA 0.62 0.17 NA NA 0.59 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 2 0.01 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0109 X NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0109 PACA 0.42 1.88 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:2 3 PACA-CA DO35152 PCSI_0109 male deceased C25.0 chemotherapy disease progression 55 330 330 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.86 PACA-CA::PCSI_0111 1 224736774 247023067 9 9 260 3 2 2 2 0 0.95 0.06 17 0 0 17 7 8 57 7 8 65.01 65.42 31.61 1 3 5 Whitelist PACA-CA 0.97 0.19 0 0 0.97 1 High confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 18 0.03 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 2 137925307 146676455 2 2 260 1 1 0 0 0 0.57 0 6 0 0 6 3 4 10 3 5 65.01 96.5 0.81 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 3 35128015 182834759 4 15 260 0 2 2 0 11 0.26 0.27 23 0 0 23 11 23 33 11 11 65.01 66.67 30.25 0 3 4 Whitelist PACA-CA 6 0.93 0.51 0 0 0.59 1 High confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 19 0.04 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 4 1409211 119628260 1 2 260 0 0 1 1 0 0.57 0 6 0.07 0.01 6 5 6 8 5 5 65.01 4.15 93.2 0 2 3 Whitelist PACA-CA 0.68 0 0.07 0.01 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 5 39347754 40734129 2 3 260 0 0 1 1 1 0.57 0.9 2 0 0 NA NA NA 18 9 9 65.01 77.61 19.71 7 4 6 Whitelist PACA-CA 0.62 1 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 5 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 6 104571922 165438064 42 46 260 10 10 11 11 4 0.99 0 37 0 0 37 6 11 49 6 8 65.01 82.15 14.85 6 2 1 Whitelist PACA-CA 3 0.96 0 0 0 1 1 Low confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 88 0.17 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 7 84232879 146936581 1 4 260 1 2 0 0 1 0.3 0.01 7 0 0 7 6 7 10 6 6 65.01 90.33 9.44 1 2 3 Whitelist PACA-CA 0.54 0.04 0 0 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 7 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 8 87827867 129796585 1 7 260 0 0 1 1 5 0.57 0.4 9 0 0 9 4 4 16 8 8 65.01 58.04 37.88 0 2 3 Whitelist PACA-CA 3 0.62 0.64 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 9 0.02 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 9 21766104 22026925 1 1 260 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 65.01 1.96 97.3 0 0 2 Whitelist PACA-CA 0.62 0.02 NA NA 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 2 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 10 5519829 45331784 3 5 260 1 1 0 1 2 0.8 0.23 24 0 0 24 4 5 27 4 6 65.01 11.73 84.82 0 2 4 Whitelist PACA-CA 1 0.62 0.47 0 0 0.84 1 Linked to high confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 8 0.02 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 11 66329047 111791324 33 35 260 8 6 11 8 2 0.67 0 40 0 0 40 8 13 50 8 8 65.01 43.04 52.89 9 3 4 Whitelist PACA-CA 0.87 0 0 0 0.75 1 High confidence PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA With other complex events 68 0.13 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 12 8918071 66045809 2 11 260 1 1 3 1 5 0.57 0 36 0 0 36 8 15 41 8 8 65.01 82.88 17.1 13 3 4 Whitelist PACA-CA 0.62 0 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 17 0.03 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 13 64946233 87297513 1 2 260 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 6 5 5 65.01 96.89 0 0 3 4 Whitelist PACA-CA 0.54 0.05 NA 0 0.48 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 14 67604710 67624231 1 1 260 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA 4 3 3 65.01 81.29 0 0 3 NA Whitelist PACA-CA 0.62 0.21 NA NA 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 2 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 15 20864069 90918909 1 2 260 1 0 1 0 0 0.57 0.13 6 0 0 6 4 6 7 4 4 65.01 95.08 0.02 0 3 5 Whitelist PACA-CA 0.68 0.32 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 16 10769414 11823517 1 1 260 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 65.01 98.74 1.17 0 2 3 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 2 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 17 34866027 34917093 1 1 260 1 0 0 0 0 0.39 0.85 1 0 NA NA NA NA NA NA NA 65.01 68.22 27.32 0 4 NA Whitelist PACA-CA 0.62 0.98 0 NA 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 2 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 18 11818542 18786144 5 5 260 2 0 1 2 0 0.53 0.24 6 0 0 6 4 6 12 4 4 65.01 85.2 10.11 0 5 6 Whitelist PACA-CA 0.68 0.48 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 10 0.02 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 19 5186871 11875669 2 2 260 0 0 1 1 0 0.57 0.5 4 0 0 4 3 4 8 4 8 65.01 63.28 36.54 0 2 3 Whitelist PACA-CA 0.68 0.74 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 20 30094234 32242265 2 2 260 1 0 1 0 0 0.57 0.28 1 0 0 NA NA NA 8 5 8 65.01 92.7 0 0 4 NA Whitelist PACA-CA 0.68 0.52 0 0 0.64 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 4 0.01 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 21 NA NA 0 0 260 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 22 36414994 36469544 1 1 260 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 65.01 88.89 0 0 4 NA Whitelist PACA-CA 0.62 0.63 NA NA 0.59 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 2 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0111 X NA NA 0 0 260 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0111 PACA 0.81 3.09 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7579344_C_-,CN:2 3 PACA-CA DO35082 PCSI_0111 male deceased C25.0 chemotherapy complete response 68 371 371 Current reformed smoker, duration not specified 19 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.2 PACA-CA::PCSI_0112 1 112998145 116152389 3 3 46 1 0 2 0 0 0.3 0 6 0 0 6 0 3 19 5 6 77.26 100 0 0 4 5 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 6 0.07 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 2 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 3 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 4 36519116 96494493 1 1 46 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 77.26 80.9 19.1 0 4 NA Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 5 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 6 68560634 68572410 1 1 46 0 1 0 0 0 0.39 0.76 1 0 NA NA NA NA NA NA NA 77.26 99.86 0 0 3 NA Whitelist PACA-CA 0.62 0.92 0 NA 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 7 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 8 NA NA 0 0 46 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.54 NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 9 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 12 10159675 10747438 2 2 46 0 0 1 1 0 0.57 0.48 2 NA 0 NA NA NA 6 0 3 77.26 96.24 0.08 0 4 9 Whitelist PACA-CA 0.68 0.72 NA 0 0.64 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 4 0.04 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 13 60611471 60701054 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 77.26 90.16 7.06 0 3 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 14 35061715 105047533 1 1 46 0 0 1 0 0 0.39 0.66 3 NA 0 NA NA NA 4 3 3 77.26 96.29 0 0 6 5 Whitelist PACA-CA 0.62 0.86 NA 0 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 18 10541384 22535842 4 4 46 1 2 1 0 0 0.57 0 15 0 0 15 0 3 22 3 3 77.26 59.47 35.89 0 6 2 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 8 0.09 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 19 NA NA 0 0 46 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.46 NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 22 NA NA 0 0 46 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.67 NA NA NA 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0112 X 27380511 137354284 1 4 46 1 0 0 2 1 0.3 0.29 4 0 0 4 0 4 4 0 4 77.26 4.07 95.71 6 2 1 Whitelist PACA-CA 0.68 0.54 0 0 0.59 0 No PACA-CA PCSI_0112 PACA 0.15 3.56 Panc-AdenoCA NA 7 0.08 NA 3 PACA-CA DO35186 PCSI_0112 female deceased combined chemo+radiation therapy unknown 76 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 NA PACA-CA::PCSI_0118 1 NA NA 0 0 17 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.64 NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 2 211328865 211556462 1 2 17 2 0 0 0 0 0.11 0.65 2 NA 0 NA NA NA NA NA NA 25.96 12.95 86.94 0 2 3 Whitelist PACA-CA 0.54 0.86 NA 0 0.48 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 4 0.12 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 6 1382594 2240410 1 1 17 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.96 99.85 0 0 1 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 7 136038480 136413026 1 1 17 1 0 0 0 0 0.39 0.61 2 NA NA NA NA NA 4 3 4 25.96 0.24 97.17 0 1 2 Whitelist PACA-CA 0.62 0.82 NA NA 0.59 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 8 NA NA 0 0 17 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 9 21490678 23211431 1 1 17 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 25.96 99.34 0 0 0 1 Whitelist PACA-CA 0.62 0.34 NA NA 0.59 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 12 38973410 52359399 1 3 17 2 0 0 0 1 0.11 0.01 5 0 0 5 0 3 7 3 3 25.96 89.04 6.64 0 1 2 Whitelist PACA-CA 0.41 0.03 0 0 0.48 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 5 0.15 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 16 78593737 78862273 2 2 17 2 0 0 0 0 0.11 0.07 2 NA 0 NA NA NA NA NA NA 25.96 0.12 99.79 0 1 2 Whitelist PACA-CA 0.54 0.22 NA 0 0.48 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 4 0.12 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 17 NA NA 0 0 17 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 18 26844903 75877315 1 2 17 1 0 1 0 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 25.96 65.62 34.37 0 1 NA Whitelist PACA-CA 0.68 0.22 NA 0 0.64 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 4 0.12 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 19 NA NA 0 0 17 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.53 NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0118 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0118 PACA 0.15 1.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 1 PACA-CA DO35200 PCSI_0118 female alive C25.2 chemotherapy complete response 62 320 320 Current reformed smoker, duration not specified 1 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.53 PACA-CA::PCSI_0132 1 NA NA 0 0 54 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 2 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 3 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 4 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 5 NA NA 0 0 54 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.5 NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 6 12235569 63239179 1 1 54 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 78.37 99.87 0 0 4 NA Whitelist PACA-CA 0.62 0.63 NA NA 0.59 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 7 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 8 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 9 21724753 22142248 1 1 54 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 6 4 4 78.37 70.8 29.06 0 0 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 10 25942536 63427013 1 7 54 0 0 0 2 5 0.11 0 8 0 0 8 3 6 11 3 4 78.37 76.82 23 0 5 2 Whitelist PACA-CA 0.77 0 0 0 0.48 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 9 0.08 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 11 33040646 35054438 5 5 54 2 1 1 1 0 0.9 0 6 0 0 6 3 5 17 3 3 78.37 99.29 0.15 26 3 2 Whitelist PACA-CA 0.93 0 0 0 0.92 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 10 0.09 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 12 76630812 77377361 7 8 54 2 1 1 3 1 0.67 0 4 0 0 4 0 3 12 3 4 78.37 5.47 90.86 6 5 2 Whitelist PACA-CA 0.68 0 0 0 0.74 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 15 0.14 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 13 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 14 NA NA 0 0 54 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 9 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 0 NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 15 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 16 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 17 NA NA 0 0 54 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 18 21699170 25987210 1 6 54 2 0 1 0 3 0.3 0 7 0 0 7 5 7 10 7 7 78.37 33.28 66.69 2 5 7 Whitelist PACA-CA 0.68 0 0 0 0.59 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 9 0.08 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 19 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 20 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 22 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0132 X 132821122 133526919 1 2 54 2 0 0 0 0 0.11 0.75 1 0 0 NA NA NA NA NA NA 78.37 99.78 0 0 4 NA Whitelist PACA-CA 0.54 0.92 0 0 0.48 0 No PACA-CA PCSI_0132 PACA 0.82 3.62 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578413_G_C,CN:2 2 PACA-CA DO35496 PCSI_0132 female deceased C25.0 chemotherapy stable disease 63 1072 1072 Current reformed smoker, duration not specified 6 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 35.26 PACA-CA::PCSI_0142 1 29565028 187265427 1 4 75 2 1 0 0 1 0.3 0.39 7 0 0 7 3 5 8 3 4 29.41 53.51 46.49 2 3 1 Whitelist PACA-CA 0.54 0.63 0 0 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 7 0.05 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 2 63626751 148802093 1 5 75 0 0 0 1 4 0.39 0.41 1 0 0 NA NA NA NA NA NA 29.41 0 99.89 0 2 NA Whitelist PACA-CA 0.93 0.66 0 0 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 3 NA NA 0 0 75 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.39 NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 4 68192274 89296665 3 3 75 1 0 1 1 0 0.8 0.35 2 0 0 NA NA NA 5 5 5 29.41 11.08 88.74 0 1 2 Whitelist PACA-CA 0.87 0.6 0 0 0.84 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 5 4951013 147433668 1 3 75 1 0 1 1 0 0.8 1 3 0 0 NA NA NA NA NA NA 29.41 39.75 60.11 0 2 1 Whitelist PACA-CA 0.87 1 0 0 0.84 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 6 22642082 107396071 1 6 75 1 0 1 0 4 0.57 0.22 5 0 0 5 3 5 9 4 4 29.41 49.85 49.9 0 1 2 Whitelist PACA-CA 0.62 0.45 0 0 0.64 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 7 8145426 147362239 1 1 75 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 29.41 0 99.78 0 2 NA Whitelist PACA-CA 0.62 0.41 NA NA 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 8 65357468 106518550 1 3 75 0 0 2 1 0 0.3 0.06 1 0 0 NA NA NA 5 5 5 29.41 14.46 85.53 0 2 NA Whitelist PACA-CA 0.62 0.18 0 0 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 9 775156 107957655 4 4 75 3 1 0 0 0 0.11 0 4 0 0 4 4 4 8 8 8 29.41 48.74 50.57 0 1 2 Whitelist PACA-CA 0.54 0.02 0 0 0.48 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 10 NA NA 0 0 75 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.37 0 NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 11 12240318 12263154 1 1 75 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 29.41 0.02 99.43 0 1 2 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 12 43288139 52713394 2 2 75 0 0 1 1 0 0.57 0.17 3 0 0 NA NA NA 6 3 4 29.41 26.95 72.97 0 2 1 Whitelist PACA-CA 0.68 0.38 0 0 0.64 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 13 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 14 38696226 63050861 1 2 75 1 1 0 0 0 0.57 0.51 4 NA 0 4 3 4 6 3 3 29.41 49.39 49.7 0 2 1 Whitelist PACA-CA 0.68 0.75 NA 0 0.64 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 15 35964113 65377427 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 29.41 28.69 71.31 0 1 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 16 11860064 71918094 3 3 75 1 0 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 29.41 0 99.89 0 2 NA Whitelist PACA-CA 0.87 0.02 0 0 0.84 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 17 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 18 10530042 52684581 3 4 75 0 0 2 1 1 0.3 0.02 4 0 0 4 3 4 5 3 3 29.41 61.27 38.69 0 1 0 Whitelist PACA-CA 0.54 0.07 0 0 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 7 0.05 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 19 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 20 21685234 39019117 1 1 75 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.41 71.51 27.5 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 21 NA NA 0 0 75 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.82 NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 22 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0142 X NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0142 PACA 0.91 1.9 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51510 PCSI_0142 male deceased C25.0 chemotherapy complete response 43 287 287 Current smoker (includes daily smokers non-daily/occasional smokers) 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0145 1 66258161 228975116 3 7 550 1 0 0 2 4 0.3 0.15 23 0 0 23 6 8 32 6 8 51.94 82.58 14.43 0 3 4 Whitelist PACA-CA 0.62 0.36 0 0 0.59 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 2 184795438 237271575 8 9 550 1 1 3 3 1 0.57 0.64 18 0 0 18 10 18 47 10 12 51.94 53.08 44.21 0 2 3 Whitelist PACA-CA 0.85 0.85 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 False positive; manually removed PACA-CA::PCSI_0145 3 76628774 82950282 11 24 550 5 2 0 4 13 0.15 0 23 0 0 23 5 8 68 11 11 51.94 70.47 26.36 5 5 6 Whitelist PACA-CA 15 0.54 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 35 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 4 91304429 92057536 2 2 550 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA 18 7 7 51.94 36.56 63.27 0 2 1 Whitelist PACA-CA 0.54 0.21 0 0 0.48 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 5 58381267 116048238 2 6 550 1 0 1 0 4 0.57 0.06 4 0 0 4 4 4 17 8 8 51.94 54.19 42.66 1 1 2 Whitelist PACA-CA 0.62 0.2 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 6 1778613 2227304 5 5 550 4 1 0 0 0 0.04 1 3 0 0 NA NA NA 24 9 9 51.94 95.97 3.77 0 4 5 Whitelist PACA-CA 0.45 1 0 0 0.36 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 7 3292583 143127800 1 16 550 5 1 1 0 9 0.04 0.26 16 0 0 16 8 9 16 8 9 51.94 56.58 43.2 3 2 3 Whitelist PACA-CA 14_15 0.79 0.5 0 0 0.38 0 Linked to low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 23 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 8 19058905 142399781 11 35 550 2 3 3 3 24 0.97 0 41 0 0 41 4 9 43 4 9 51.94 47.84 48.68 0 2 3 Whitelist PACA-CA 14_7 0.68 0 0 0 0.98 0 Low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 46 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 9 28088597 28305842 2 2 550 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 30 5 8 51.94 54.52 42.91 0 4 5 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 10 126528740 126663651 3 3 550 0 1 1 1 0 0.8 0.02 1 0 0 NA NA NA 5 5 5 51.94 0.45 99.43 0 2 NA Whitelist PACA-CA 0.87 0.08 0 0 0.84 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 11 60239163 76092996 2 4 550 1 0 1 0 2 0.57 0.69 7 0 0 7 3 5 24 6 8 51.94 75.53 24.05 0 3 4 Whitelist PACA-CA 17 0.68 0.89 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 12 15060499 101096994 1 8 550 3 0 0 1 4 0.11 0.09 14 0 0 14 9 14 15 10 10 51.94 38.06 61.86 1 3 2 Whitelist PACA-CA 0.28 0.24 0 0 0.48 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 13 62732753 113705990 1 8 550 4 2 0 0 2 0.06 0.06 9 0 0 9 9 9 10 9 9 51.94 19.77 80.23 1 2 1 Whitelist PACA-CA 18 0.54 0.19 0 0 0.48 0 Linked to low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA Canonical without polyploidization 14 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 14 32259593 106721663 30 35 550 7 8 7 8 5 0.99 0 71 0 0 71 7 11 77 7 11 51.94 80.63 3.93 3 4 6 Whitelist PACA-CA 0.98 0 0 0 1 0 High confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 65 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 15 29942435 85558505 1 9 550 3 0 1 0 5 0.11 0.7 11 0 0 11 6 6 15 8 8 51.94 22.58 72.54 0 2 1 Whitelist PACA-CA 3_7 0.68 0.89 0 0 0.48 0 Linked to low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 13 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 16 19189550 78508077 1 10 550 6 0 1 1 2 0.01 0.79 18 0 0 18 6 8 19 7 9 51.94 75.9 19.58 1 3 2 Whitelist PACA-CA 0.3 0.94 0 0 0.21 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 18 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 17 13127153 54556133 1 8 550 5 2 0 0 1 0.02 1 15 0 0 15 8 12 18 8 12 51.94 59.24 39.88 0 3 2 Whitelist PACA-CA 0.41 1 0 0 0.33 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 15 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 18 3500844 76201208 21 28 550 8 6 3 4 7 0.42 0 28 0 0 28 6 13 29 6 8 51.94 72.91 21.69 4 3 2 Whitelist PACA-CA 13 0.81 0 0 0 0.63 0 Low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 49 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 19 8923906 46548614 7 33 550 2 1 2 2 26 0.93 0 41 0 0 41 4 6 53 5 5 51.94 77.96 12.26 7 8 3 Whitelist PACA-CA 14_3 0.68 0 0 0 0.95 0 Low confidence PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA With other complex events 40 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 20 17841609 17942564 2 2 550 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 25 9 10 51.94 70.67 28.34 0 2 4 Whitelist PACA-CA 0.68 0.05 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 21 34733586 47795515 1 8 550 4 0 1 1 2 0.11 0.03 10 0 0 10 3 8 14 6 6 51.94 69.39 7.27 0 3 2 Whitelist PACA-CA 0.28 0.11 0 0 0.48 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 14 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 22 23337410 51053825 1 3 550 1 1 0 0 1 0.57 0.43 4 0 0 4 0 3 7 5 5 51.94 3.3 96.21 0 1 2 Whitelist PACA-CA 0.62 0.68 0 0 0.64 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 5 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0145 X 30183826 150716262 1 6 550 4 2 0 0 0 0.06 0 8 0 0 8 6 8 9 7 7 51.94 0.32 99.45 0 2 1 Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0145 PACA 0.87 2.72 Panc-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 3 PACA-CA DO51489 PCSI_0145 female alive C25.2 chemotherapy complete response 60 1612 1612 Current reformed smoker, duration not specified 26 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 53.03 PACA-CA::PCSI_0146 1 117947739 190957705 1 2 19 2 0 0 0 0 0.11 0.18 3 NA 0 NA NA NA 7 5 6 11.65 63.57 33.45 0 3 1 Whitelist PACA-CA 0.54 0.4 NA 0 0.48 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 4 0.11 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 2 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 4 NA NA 0 0 19 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 5 132450206 164735884 1 2 19 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 11.65 0.02 99.84 0 1 2 Whitelist PACA-CA 0.54 0.59 NA 0 0.48 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 4 0.11 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 8 104076061 104174048 1 2 19 0 0 1 1 0 0.57 0.25 1 NA 0 NA NA NA NA NA NA 11.65 0 99.99 0 2 NA Whitelist PACA-CA 0.68 0.49 NA 0 0.64 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 4 0.11 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 9 21791378 33133157 2 2 19 2 0 0 0 0 0.11 0.04 3 0 0 NA NA NA 4 0 3 11.65 8.03 91.8 0 0 1 Whitelist PACA-CA 0.54 0.13 0 0 0.48 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 4 0.11 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 11 16255397 16386252 1 1 19 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 11.65 0 99.57 0 2 NA Whitelist PACA-CA 0.62 0.81 NA NA 0.59 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 2 0.05 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 12 NA NA 0 0 19 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.46 NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 20 22968572 25140746 1 2 19 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 4 3 4 11.65 86.46 5.71 0 1 2 Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 4 0.11 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0146 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0146 PACA 0.67 1.98 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51548 PCSI_0146 female alive C25.0 chemotherapy complete response 55 2177 2177 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 71.61 PACA-CA::PCSI_0161 1 50465320 231893547 1 8 187 1 6 0 1 0 0.01 0.41 18 0 0 18 5 7 21 5 7 70.26 49.51 47.17 0 6 7 Whitelist PACA-CA 0.28 0.66 0 0 0.21 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 16 0.04 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 2 4154479 223101138 1 9 187 0 9 0 0 0 0 0.15 13 0 0 13 13 13 13 13 13 70.26 99.89 0 0 3 4 Whitelist PACA-CA 0 0.35 0 0 0 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 3 61229738 194150253 1 11 187 2 7 0 2 0 0.02 0.57 11 0 0 11 5 7 14 5 5 70.26 69 30.87 0 4 1 Whitelist PACA-CA 0.41 0.79 0 0 0.33 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 22 0.06 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 4 17893938 168798248 1 6 187 0 5 0 1 0 0.01 0.14 13 0 0 13 12 13 14 12 12 70.26 26.41 71.2 0 2 3 Whitelist PACA-CA 0.25 0.34 0 0 0.19 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 5 6881122 176936455 1 6 187 3 3 0 0 0 0.11 0.18 12 0 0 12 4 12 13 4 4 70.26 55.08 44.78 0 3 2 Whitelist PACA-CA 0.54 0.39 0 0 0.48 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 6 57983462 62511021 2 2 187 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 19 9 9 70.26 73.93 23.25 0 2 3 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 7 68360599 154465203 1 9 187 3 5 1 0 0 0.09 0.74 14 0 0 14 5 12 16 5 5 70.26 99.77 0 0 4 3 Whitelist PACA-CA 0.54 0.91 0 0 0.48 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 8 101335870 101414737 1 1 187 0 1 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 70.26 99.99 0 0 3 NA Whitelist PACA-CA 0.62 0.2 0 NA 0.59 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 9 21767592 47187718 3 3 187 0 1 2 0 0 0.3 0.34 5 0 0 5 3 5 17 4 8 70.26 35.05 61.76 0 2 0 Whitelist PACA-CA 0.62 0.59 0 0 0.59 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 10 24877742 124158917 1 4 187 0 4 0 0 0 0.01 0.29 6 0 0 6 3 6 7 3 7 70.26 99.82 0 0 3 4 Whitelist PACA-CA 0.21 0.54 0 0 0.16 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 11 62356853 127076763 1 5 187 1 4 0 0 0 0.04 0.38 7 0 0 7 7 7 10 8 8 70.26 79.78 19.79 0 3 4 Whitelist PACA-CA 0.45 0.63 0 0 0.36 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 12 64710672 64818915 2 2 187 0 0 1 1 0 0.57 0.39 4 0 0 4 4 4 15 5 7 70.26 95.23 4.75 0 3 4 Whitelist PACA-CA 0.68 0.63 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 13 23865790 23949826 3 3 187 0 1 1 1 0 0.8 0.54 5 0 0 5 5 5 11 9 9 70.26 100 0 0 3 4 Whitelist PACA-CA 0.87 0.77 0 0 0.84 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 14 20859874 103670066 1 3 187 0 3 0 0 0 0.03 0.67 11 0 0 11 7 11 11 7 7 70.26 99.09 0 0 3 4 Whitelist PACA-CA 0.41 0.87 0 0 0.33 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 15 41140768 85952488 1 4 187 0 4 0 0 0 0.01 1 5 0 0 5 3 5 6 3 5 70.26 96.24 3.6 0 3 4 Whitelist PACA-CA 0.21 1 0 0 0.16 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 16 78585478 78891759 2 2 187 2 0 0 0 0 0.11 0.65 6 0 0 6 4 5 10 5 5 70.26 99.77 0.14 0 1 2 Whitelist PACA-CA 0.54 0.86 0 0 0.48 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 17 11027888 12007693 2 2 187 0 0 1 1 0 0.57 0.17 3 0 0 NA NA NA 9 3 5 70.26 2.78 97.19 0 2 0 Whitelist PACA-CA 0.68 0.39 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 18 8685157 57819804 1 5 187 1 4 0 0 0 0.04 0.65 8 0 0 8 3 5 9 4 4 70.26 22.7 72.66 0 2 6 Whitelist PACA-CA 0.45 0.86 0 0 0.36 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 19 5151980 6162822 2 2 187 0 0 1 1 0 0.57 0.19 3 0 0 NA NA NA 8 5 5 70.26 99.54 0 0 3 1 Whitelist PACA-CA 0.68 0.41 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 20 14641334 60818069 1 3 187 1 2 0 0 0 0.3 1 8 0 0 8 3 5 10 3 5 70.26 62.63 30.24 0 2 4 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 21 26050273 37234446 1 2 187 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 70.26 45.78 24.51 0 2 3 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 22 28580196 28661311 2 2 187 0 0 1 1 0 0.57 0.07 2 0 0 NA NA NA 7 7 7 70.26 0.37 99.63 0 2 3 Whitelist PACA-CA 0.68 0.21 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0161 X 9975441 10007191 2 2 187 0 1 1 0 0 0.57 0 1 0 0 NA NA NA 34 5 6 70.26 95.75 0.86 0 2 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0161 PACA 0.63 2.98 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578236_G_A,CN:2 3 PACA-CA DO51469 PCSI_0161 female deceased C25.1 no treatment 80 314 314 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.33 PACA-CA::PCSI_0162 1 76624051 223545788 1 3 66 2 0 0 0 1 0.11 1 7 0 0 7 6 7 8 6 6 71.72 99.88 0.12 0 3 5 Whitelist PACA-CA 0.62 1 0 0 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 5 0.04 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 2 58642086 63185748 2 2 66 0 1 0 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 71.72 99.9 0 0 3 NA Whitelist PACA-CA 0.68 0.39 NA 0 0.64 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 4 0.03 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 3 4721986 137732792 1 4 66 2 1 0 0 1 0.3 1 7 0.03 0 7 3 5 8 3 4 71.72 52.57 44.27 0 3 1 Whitelist PACA-CA 0.68 1 0.03 0 0.59 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 7 0.05 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 4 164657954 176241972 3 4 66 1 0 1 1 1 0.8 0 4 0 0 4 0 3 20 5 6 71.72 79.02 20.72 0 2 4 Whitelist PACA-CA 1 0.02 0 0 0.84 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 7 0.05 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 5 93253948 93596187 1 2 66 2 0 0 0 0 0.11 0.8 2 0 0 NA NA NA NA NA NA 71.72 99.86 0 0 1 3 Whitelist PACA-CA 0.54 0.95 0 0 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 4 0.03 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 6 14575801 97829880 1 2 66 1 1 0 0 0 0.57 0.44 3 NA 0.02 NA NA NA NA NA NA 71.72 99.75 0.07 0 3 2 Whitelist PACA-CA 0.68 0.69 NA 0.02 0.64 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 4 0.03 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 7 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 8 NA NA 0 0 66 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 9 21807332 131576260 1 5 66 1 1 0 1 2 0.8 0.19 8 0 0 8 4 6 10 4 4 71.72 99.86 0 0 4 3 Whitelist PACA-CA 0.93 0.41 0 0 0.84 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 8 0.06 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 10 83966243 114901238 1 3 66 1 2 0 0 0 0.3 0.13 5 0 0 5 3 5 8 6 6 71.72 25.02 74.76 0 2 1 Whitelist PACA-CA 0.62 0.32 0 0 0.59 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 6 0.05 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 11 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 12 3185047 52688911 1 2 66 0 2 0 0 0 0.11 0.77 3 NA 0.04 NA NA NA NA NA NA 71.72 29.6 66.66 0 2 3 Whitelist PACA-CA 0.54 0.93 NA 0.04 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 4 0.03 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 13 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 14 45971442 46023710 1 1 66 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 3 5 71.72 0.27 84.01 0 0 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 2 0.02 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 15 23217217 86097979 1 2 66 0 2 0 0 0 0.11 0.71 2 NA 0 NA NA NA NA NA NA 71.72 44.52 55.48 0 2 3 Whitelist PACA-CA 0.54 0.9 NA 0 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 4 0.03 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 16 33791525 89932613 8 9 66 3 1 2 2 1 0.8 0 23 0 0 23 4 7 26 4 7 71.72 90.21 4.22 1 4 6 Whitelist PACA-CA 0.97 0 0 0 0.84 0 Low confidence PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA With other complex events 17 0.13 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 17 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 18 1471452 49113209 1 4 66 3 0 1 0 0 0.11 0.1 3 0 0 NA NA NA 4 0 0 71.72 95.38 0 0 1 3 Whitelist PACA-CA 0.54 0.27 0 0 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 8 0.06 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 19 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 20 14317490 54773427 1 4 66 3 0 0 1 0 0.11 0.05 7 0 0 7 6 7 8 7 7 71.72 98.47 0.55 0 2 4 Whitelist PACA-CA 0.54 0.17 0 0 0.48 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 8 0.06 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 21 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 0 0 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 22 17932842 19676088 1 1 66 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA 4 4 4 71.72 42.13 57.87 0 2 3 Whitelist PACA-CA 0.62 0.4 NA NA 0.59 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 2 0.02 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0162 X 31247895 31731519 1 1 66 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 71.72 0.31 99.46 0 1 2 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0162 PACA 0.72 2.93 Panc-AdenoCA NA 2 0.02 stopgain,17_7577579_C_G,CN:2 2 PACA-CA DO51504 PCSI_0162 female deceased C25.0 chemotherapy complete response 67 494 494 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.25 PACA-CA::PCSI_0164 1 195211232 195596466 1 1 25 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 95.83 99.84 0.15 0 2 4 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 2 221918573 222124083 1 1 25 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 95.83 99.91 0 0 4 5 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 3 60298907 102976785 1 2 25 2 0 0 0 0 0.11 0.25 2 0 0 NA NA NA NA NA NA 95.83 99.95 0 0 3 4 Whitelist PACA-CA 0.54 0.5 0 0 0.48 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 4 0.08 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 4 91802645 91967262 1 2 25 2 0 0 0 0 0.11 0.08 4 0 0 4 4 4 6 6 6 95.83 99.79 0 0 3 4 Whitelist PACA-CA 0.54 0.23 0 0 0.48 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 4 0.08 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 6 NA NA 0 0 25 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.41 NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 7 110901953 111054218 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 95.83 99.77 0 0 3 6 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 8 100440003 100473800 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 95.83 99.88 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 9 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 10 68292389 68339032 1 1 25 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 95.83 99.82 0 1 3 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 12 43073186 54143778 1 2 25 2 0 0 0 0 0.11 0.33 2 NA 0 NA NA NA NA NA NA 95.83 99.92 0 0 3 5 Whitelist PACA-CA 0.54 0.58 NA 0 0.48 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 4 0.08 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 13 95918081 95946647 1 1 25 0 1 0 0 0 0.39 0.21 2 NA 0 NA NA NA 4 4 4 95.83 97.22 0 0 6 7 Whitelist PACA-CA 0.62 0.44 NA 0 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 16 78354568 78842860 1 2 25 2 0 0 0 0 0.11 0.14 4 NA 0 4 3 4 5 3 5 95.83 99.78 0.11 0 4 2 Whitelist PACA-CA 0.54 0.34 NA 0 0.48 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 4 0.08 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 17 17774512 17788131 1 1 25 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 95.83 99.99 0 0 4 NA Whitelist PACA-CA 0.62 0.74 NA NA 0.59 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 2 0.04 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 18 NA NA 0 0 25 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.74 NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0164 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0164 PACA 0.79 4.27 Panc-AdenoCA NA 0 0 stopgain;nonsynonymous_SNV,17_7574003_A_G;17_7578388_T_C,CN:4 5 PACA-CA DO49418 PCSI_0164 male deceased C24.0/C24.1 chemotherapy complete response 58 1448 1448 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.63 PACA-CA::PCSI_0170 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 2 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 3 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 4 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 5 10812091 11063683 1 1 33 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.61 0.14 99.72 0 3 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 6 14017878 66693498 1 1 33 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 17.61 69.07 30.78 0 1 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 7 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 8 36428295 40948877 2 2 33 0 1 0 1 0 0.57 0.02 6 0 0 6 3 6 6 3 3 17.61 25.6 74.39 0 2 1 Whitelist PACA-CA 0.68 0.1 0 0 0.64 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 10 43227371 45607618 1 2 33 0 0 1 1 0 0.57 0.66 1 NA 0 NA NA NA NA NA NA 17.61 0 99.82 0 2 NA Whitelist PACA-CA 0.68 0.87 NA 0 0.64 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 15 24575535 24782991 1 1 33 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 17.61 0 100 0 2 NA Whitelist PACA-CA 0.62 0.82 NA NA 0.59 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 16 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 17 51426669 52497696 1 1 33 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 7 4 4 17.61 62.24 33.3 0 1 2 Whitelist PACA-CA 0.62 0.46 NA NA 0.59 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 18 11219803 26153317 1 2 33 1 1 0 0 0 0.57 0.22 4 NA 0 4 3 4 6 4 6 17.61 80.31 14.58 5 3 1 Whitelist PACA-CA 0.68 0.45 NA 0 0.64 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 19 28426608 34375994 6 7 33 0 1 2 3 1 0.34 0 11 0 0 11 4 5 15 4 5 17.61 51.63 41.09 2 5 7 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 13 0.2 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 20 23686649 49385466 1 2 33 1 0 0 1 0 0.57 0.16 1 NA 0 NA NA NA NA NA NA 17.61 0 99.03 0 2 NA Whitelist PACA-CA 0.68 0.36 NA 0 0.64 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0170 X NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0170 PACA 0.89 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577097_T_C,CN:1 2 PACA-CA DO51484 PCSI_0170 female deceased C25.0 chemotherapy complete response 63 1460 1460 Current reformed smoker, duration not specified 41 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.03 PACA-CA::PCSI_0171 1 NA NA 0 0 24 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 2 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 4 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 5 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 6 57636357 65432892 3 3 24 0 0 1 2 0 0.3 0 8 0 0 8 4 6 13 4 6 21 96.72 0.32 0 4 5 Whitelist PACA-CA 0.62 0.01 0 0 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 6 0.12 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 7 NA NA 0 0 24 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 9 30536920 30563136 1 2 24 0 0 0 1 1 0.39 0 3 0 NA NA NA NA 6 6 6 21 26.57 72.72 0 2 1 Whitelist PACA-CA 0.68 0.01 0 NA 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 3 0.06 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 10 96294389 96527342 1 1 24 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21 0 99.82 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 11 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 13 74303269 115105857 3 3 24 0 0 2 1 0 0.3 0.01 3 0 0 NA NA NA NA NA NA 21 35.2 64.75 6 1 2 Whitelist PACA-CA 0.62 0.04 0 0 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 6 0.12 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 17 56016814 56662998 1 1 24 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 3 3 21 28.21 67.33 0 1 2 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 18 22673583 24294256 3 6 24 0 1 1 1 3 0.8 0 7 0 0 7 7 7 10 10 10 21 67.49 32.48 0 1 2 Whitelist PACA-CA 0.93 0 0 0 0.84 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 9 0.19 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 19 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 20 60601215 60685808 1 1 24 0 1 0 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 21 0 99.03 0 2 NA Whitelist PACA-CA 0.62 0.65 NA NA 0.59 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0171 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0171 PACA 0.92 2.08 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577570_T_C,CN:1 2 PACA-CA DO51543 PCSI_0171 female deceased C25.1 chemotherapy complete response 76 1431 1431 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 47.07 PACA-CA::PCSI_0173 1 181813702 197936560 1 3 140 3 0 0 0 0 0.03 0.03 6 0 0 6 4 6 8 5 8 85.34 99.56 0.44 0 4 2 Whitelist PACA-CA 0.41 0.1 0 0 0.33 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 6 0.02 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 2 156697897 174544813 9 17 140 3 3 1 2 8 0.75 0 10 0 0 10 10 10 27 11 11 85.34 99.81 0.08 9 3 4 Whitelist PACA-CA 0.68 0 0 0 0.83 1 High confidence PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA After polyploidization 26 0.09 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 3 118093875 163140638 1 2 140 2 0 0 0 0 0.11 0.02 5 0 0 5 3 3 7 5 5 85.34 99.91 0 0 3 4 Whitelist PACA-CA 0.54 0.08 0 0 0.48 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 4 161860213 180181398 1 3 140 1 0 0 1 1 0.57 0.74 5 0 0 5 5 5 17 9 11 85.34 99.71 0.08 0 4 3 Whitelist PACA-CA 0.87 0.91 0 0 0.64 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 5 0.02 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 5 9311584 45281354 10 11 140 2 3 2 3 1 0.94 0 21 0 0 21 5 9 31 5 9 85.34 96.1 0.77 1 3 4 Whitelist PACA-CA 0.87 0.01 0 0 0.96 1 Low confidence PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA With other complex events 21 0.08 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 6 3207314 101650029 1 3 140 1 0 1 0 1 0.57 0.86 7 0 0.01 7 4 4 14 4 5 85.34 71.69 28.17 0 5 2 Whitelist PACA-CA 0.87 0.99 0 0.01 0.64 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 5 0.02 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 7 43339697 45058373 2 2 140 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 24 6 6 85.34 50.26 47.15 3 6 7 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 8 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 9 21884659 115794297 1 3 140 3 0 0 0 0 0.03 0.38 9 0.01 0 9 3 4 11 3 5 85.34 79.23 17.66 4 3 0 Whitelist PACA-CA 0.41 0.63 0.01 0 0.33 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 6 0.02 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 10 24809891 132494130 1 2 140 2 0 0 0 0 0.11 0.22 5 0.01 0 5 3 3 6 3 4 85.34 97.16 2.67 12 1 2 Whitelist PACA-CA 0.54 0.46 0.01 0 0.48 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 11 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 12 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 13 21713607 111792974 4 5 140 2 0 1 1 1 0.57 0.49 3 0 0 NA NA NA NA NA NA 85.34 100 0 6 3 5 Whitelist PACA-CA 0.62 0.73 0 0 0.64 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 9 0.03 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 14 48285103 48830712 1 1 140 1 0 0 0 0 0.39 0.63 2 0 NA NA NA NA 5 3 4 85.34 56.08 28.01 0 1 3 Whitelist PACA-CA 0.62 0.84 0 NA 0.59 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 15 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 16 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 17 NA NA 0 0 140 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 18 10487843 54651877 9 10 140 4 0 3 2 1 0.27 0 22 0 0 22 6 7 25 6 6 85.34 51.16 42.97 0 4 2 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA With other complex events 19 0.07 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 19 4259659 24443937 1 2 140 1 0 0 1 0 0.57 1 4 NA 0 4 4 4 5 5 5 85.34 77.65 22.18 0 2 3 Whitelist PACA-CA 0.68 1 NA 0 0.64 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 20 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 21 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 22 NA NA 0 0 140 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.88 NA NA NA 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0173 X 83787538 154273818 12 13 140 3 3 3 3 1 1 0 34 0 0 34 3 4 45 5 10 85.34 73.41 26.36 2 2 4 Whitelist PACA-CA 0.99 0 0 0 1 1 No PACA-CA PCSI_0173 PACA 0.42 3.5 Panc-AdenoCA NA 25 0.09 NA 4 PACA-CA DO51492 PCSI_0173 female deceased C25.0 chemotherapy disease progression 57 282 282 Current reformed smoker, duration not specified 15 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.28 PACA-CA::PCSI_0174 1 6180679 85586910 1 3 110 3 0 0 0 0 0.03 0.05 6 0 0 6 6 6 7 7 7 74.94 88.96 11.03 0 2 4 Whitelist PACA-CA 0.41 0.16 0 0 0.33 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 2 115161982 153715551 3 3 110 2 1 0 0 0 0.3 0.86 5 0 0 5 3 5 7 4 4 74.94 84.28 15.62 0 2 4 Whitelist PACA-CA 0.62 1 0 0 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 3 21306913 163472427 1 2 110 2 0 0 0 0 0.11 0.19 4 0.01 0 4 4 4 5 5 5 74.94 98.92 1.05 4 2 4 Whitelist PACA-CA 0.54 0.41 0.01 0 0.48 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 4 13728814 171055911 1 12 110 3 2 0 1 6 0.34 0.02 10 0 0 10 3 5 12 3 6 74.94 89.85 10 3 3 4 Whitelist PACA-CA 6 0.68 0.08 0 0 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 18 0.08 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 5 130769248 169829492 3 3 110 2 1 0 0 0 0.3 0.85 6 0 0 6 6 6 13 13 13 74.94 91.97 7.9 0 2 4 Whitelist PACA-CA 0.62 0.98 0 0 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 6 84088338 163305186 1 11 110 5 1 1 0 4 0.04 0.02 12 0 0 12 5 9 15 6 8 74.94 58.91 40.94 9 2 3 Whitelist PACA-CA 0.34 0.09 0 0 0.38 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 18 0.08 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 7 124970976 124985123 1 1 110 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 74.94 99.78 0 0 4 NA Whitelist PACA-CA 0.62 0.12 NA NA 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 8 86028588 141813758 3 3 110 0 2 0 1 0 0.3 0.66 4 0 0 4 3 4 5 3 3 74.94 99.99 0 0 4 3 Whitelist PACA-CA 0.62 0.87 0 0 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 9 21368931 22159015 1 1 110 1 0 0 0 0 0.39 0.62 2 0 NA NA NA NA 8 3 3 74.94 5.9 90.99 0 0 2 Whitelist PACA-CA 0.62 0.84 0 NA 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 10 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 11 4497415 80861714 26 26 110 7 6 6 7 0 0.98 0 29 0 0 29 7 17 31 7 9 74.94 99.48 0.1 7 5 6 Whitelist PACA-CA 1 0 0 0 0.99 1 High confidence PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA With other complex events 52 0.24 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 12 66063930 125051071 1 2 110 2 0 0 0 0 0.11 0.25 4 NA 0 4 4 4 5 5 5 74.94 76.99 22.93 0 2 4 Whitelist PACA-CA 0.54 0.49 NA 0 0.48 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 13 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 14 55097214 87317875 3 3 110 1 0 1 1 0 0.8 0.78 5 0 0 5 5 5 7 7 7 74.94 68.49 30.6 0 4 2 Whitelist PACA-CA 0.87 0.94 0 0 0.84 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 15 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 16 8540489 84084635 1 4 110 2 1 1 0 0 0.57 0.22 8 0 0 8 3 8 9 3 3 74.94 99.21 0.68 0 4 2 Whitelist PACA-CA 0.68 0.46 0 0 0.64 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 17 18906245 30702065 2 2 110 0 0 1 1 0 0.57 0.08 5 0 0 5 5 5 13 5 7 74.94 65 35 0 4 2 Whitelist PACA-CA 0.68 0.23 0 0 0.64 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 18 92766 49391448 1 4 110 1 0 0 1 2 0.57 0.08 10 0 0 10 3 5 10 3 5 74.94 40.6 54.75 3 2 3 Whitelist PACA-CA 17 0.68 0.22 0 0 0.64 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 19 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 20 14971125 15095098 1 1 110 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA 5 3 3 74.94 54.39 38.58 0 0 2 Whitelist PACA-CA 0.62 0.91 NA NA 0.59 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 21 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 22 19891703 50340735 3 3 110 0 1 1 1 0 0.8 0.04 5 0 0 5 3 5 6 3 6 74.94 77.01 21.11 3 4 2 Whitelist PACA-CA 0.87 0.15 0 0 0.84 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0174 X 14220952 14346351 2 2 110 0 0 1 1 0 0.57 0.18 4 NA 0 4 4 4 6 6 6 74.94 1.81 98.19 0 1 2 Whitelist PACA-CA 0.68 0.4 NA 0 0.64 1 No PACA-CA PCSI_0174 PACA 0.75 3.5 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PACA-CA DO51466 PCSI_0174 male deceased C25.0 chemotherapy complete response 69 351 351 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.55 PACA-CA::PCSI_0175 1 161151269 161939014 2 2 47 0 0 1 1 0 0.57 0.27 3 0 0 NA NA NA 6 5 5 23.37 0.87 99.12 0 2 1 Whitelist PACA-CA 0.68 0.51 0 0 0.64 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 2 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 3 46128726 186687463 1 8 47 3 0 1 0 4 0.11 0 10 0 0 10 6 10 11 7 7 23.37 19.34 80.63 0 2 1 Whitelist PACA-CA 11 0.54 0.01 0 0 0.48 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 12 0.13 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 4 151115405 151724364 1 1 47 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 5 5 5 23.37 7.5 90.14 0 1 2 Whitelist PACA-CA 0.62 0.93 NA NA 0.59 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 5 142572365 143579763 1 1 47 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 23.37 0.56 99.3 0 1 2 Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 6 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 7 71413765 77417705 1 2 47 2 0 0 0 0 0.11 0.32 4 0 0 4 4 4 7 7 7 23.37 0.62 99.16 0 1 2 Whitelist PACA-CA 0.54 0.57 0 0 0.48 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 8 30098381 63180369 1 2 47 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 23.37 0.17 99.83 0 1 2 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 9 21584603 22135420 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.37 99.86 0 0 0 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 10 125196729 125214749 1 1 47 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 23.37 0.15 99.84 0 2 NA Whitelist PACA-CA 0.62 0.72 NA NA 0.59 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 11 20895699 63975821 1 3 47 3 0 0 0 0 0.03 0.01 4 0 0 4 4 4 7 5 5 23.37 1.67 97.77 0 1 2 Whitelist PACA-CA 0.41 0.03 0 0 0.33 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 12 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 13 92892088 109386801 3 7 47 1 1 0 1 4 0.8 0 7 0 0 7 5 7 9 5 5 23.37 3.75 96.25 0 2 1 Whitelist PACA-CA 11 0.77 0 0 0 0.84 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 10 0.11 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 14 NA NA 0 0 47 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 15 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 16 78547480 78666674 1 1 47 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 5 3 3 23.37 0.13 99.77 0 1 2 Whitelist PACA-CA 0.62 0.61 NA NA 0.59 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 17 9413825 12238580 1 2 47 2 0 0 0 0 0.11 0.36 2 NA 0 NA NA NA 4 3 3 23.37 26.53 68.22 0 0 1 Whitelist PACA-CA 0.54 0.62 NA 0 0.48 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 18 39501293 74063613 1 2 47 2 0 0 0 0 0.11 0.36 4 NA 0 4 3 4 5 3 3 23.37 44.27 55.7 0 1 0 Whitelist PACA-CA 0.54 0.61 NA 0 0.48 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 19 28080287 28120118 2 2 47 0 0 1 1 0 0.57 0.24 1 NA 0 NA NA NA NA NA NA 23.37 0 99.83 0 2 NA Whitelist PACA-CA 0.68 0.47 NA 0 0.64 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 20 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0175 X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0175 PACA 0.81 1.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 2 PACA-CA DO51470 PCSI_0175 female deceased C25.0 combined chemo+radiation therapy complete response 51 444 444 Current reformed smoker, duration not specified 14 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 14.61 PACA-CA::PCSI_0208 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 2 14650061 41536099 1 2 27 1 0 0 0 1 0.39 0.49 2 NA NA NA NA NA NA NA NA 10.76 11.06 88.85 0 1 2 Whitelist PACA-CA 0.68 0.74 NA NA 0.59 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 3 0.06 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 3 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 4 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 5 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 6 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 9 NA NA 0 0 27 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.24 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 10 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 12 22441521 42871531 1 2 27 1 1 0 0 0 0.57 0 7 0 0 7 7 7 10 10 10 10.76 27.19 72.72 0 2 1 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 4 0.07 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 14 NA NA 0 0 27 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.8 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 17 27512548 52837653 10 10 27 1 4 2 3 0 0.57 0 17 0 0 17 6 6 20 6 6 10.76 91.56 3.91 23 3 4 Whitelist PACA-CA 0.68 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA With other complex events 20 0.37 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 18 NA NA 0 0 27 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0208 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0208 PACA 0.95 1.91 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 2 PACA-CA DO35454 PCSI_0208 female deceased C25.0 chemotherapy unknown 74 315 315 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.36 PACA-CA::PCSI_0210 1 NA NA 0 0 194 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 2 NA NA 0 0 194 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 0 NA NA 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 3 161515687 194895663 45 47 194 12 12 9 12 2 0.9 0 35 0 0 35 4 8 52 8 12 21.56 89.01 7.81 13 5 4 Whitelist PACA-CA 0.96 0 0 0 0.92 0 Low confidence PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA With other complex events 92 0.24 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 4 91097708 190886349 1 4 194 3 0 0 0 1 0.03 0.47 1 0 0 NA NA NA NA NA NA 21.56 0 99.84 2 2 NA Whitelist PACA-CA 0.54 0.72 0 0 0.33 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 5 9420787 9533168 1 1 194 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 21.56 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.05 NA NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 6 10901500 162853700 1 5 194 0 1 1 0 3 0.57 0.1 6 0 0 6 3 6 8 3 3 21.56 30.25 69.6 0 3 2 Whitelist PACA-CA 0.62 0.26 0 0 0.64 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 7 18548796 107410599 1 4 194 2 0 0 1 1 0.3 0.11 3 0 0 NA NA NA NA NA NA 21.56 0.04 99.73 0 2 1 Whitelist PACA-CA 0.68 0.28 0 0 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 8 33791127 43503910 15 21 194 4 4 3 4 6 0.98 0 30 0 0 30 4 6 39 9 9 21.56 48.87 47.71 0 8 5 Whitelist PACA-CA 0.76 0 0 0 0.99 0 Low confidence PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA With other complex events 36 0.09 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 9 16027351 38051442 3 5 194 0 0 2 1 2 0.3 0.71 8 0 0 8 3 8 9 4 9 21.56 26.67 72.63 0 3 1 Whitelist PACA-CA 0.68 0.9 0 0 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 10 74917275 110822964 1 7 194 2 0 1 1 3 0.57 0.3 3 0 0 NA NA NA 4 4 4 21.56 13.96 85.87 2 2 1 Whitelist PACA-CA 0.68 0.55 0 0 0.64 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 11 49316404 116404192 5 9 194 1 1 2 1 4 0.9 1 2 0 0 NA NA NA NA NA NA 21.56 37.47 61.98 0 1 2 Whitelist PACA-CA 0.85 1 0 0 0.92 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 12 33990231 64146200 1 6 194 2 1 1 0 2 0.57 0.73 5 0 0 5 3 3 6 3 4 21.56 57.76 42.16 2 2 3 Whitelist PACA-CA 0.93 0.91 0 0 0.64 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 13 114299725 114437711 1 1 194 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 21.56 0 96.59 0 2 NA Whitelist PACA-CA 0.62 0.21 NA NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 14 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 15 57189605 57249779 1 1 194 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 21.56 1.18 93.94 0 2 NA Whitelist PACA-CA 0.62 0.16 NA NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 16 78569061 78591621 1 1 194 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 21.56 0 99.91 0 2 NA Whitelist PACA-CA 0.62 0.21 NA NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 17 19774660 25299392 2 3 194 0 1 0 1 1 0.57 0.04 3 0 0 NA NA NA 12 3 3 21.56 24.77 69.98 0 2 3 Whitelist PACA-CA 0.87 0.15 0 0 0.64 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 18 19918536 19951854 1 1 194 0 0 1 0 0 0.39 0.65 1 0 NA NA NA NA 4 3 4 21.56 95.02 0 1 1 NA Whitelist PACA-CA 0.62 0.86 0 NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 19 43285650 44961878 1 2 194 1 0 1 0 0 0.57 0.44 1 0 0 NA NA NA NA NA NA 21.56 41.09 51.63 0 2 NA Whitelist PACA-CA 0.68 0.69 0 0 0.64 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 20 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 21 NA NA 0 0 194 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 22 35795547 35894403 1 1 194 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 21.56 0 100 0 2 NA Whitelist PACA-CA 0.62 0.91 NA NA 0.59 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0210 X 33411416 33475272 3 3 194 1 0 1 1 0 0.8 0.1 6 0 0 6 0 3 12 5 5 21.56 44.56 55.21 0 2 4 Whitelist PACA-CA 0.87 0.26 0 0 0.84 0 No PACA-CA PCSI_0210 PACA 0.86 2 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578395_A_G,CN:1 1 PACA-CA DO51538 PCSI_0210 female deceased C25.0 chemotherapy complete response 76 361 361 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.88 PACA-CA::PCSI_0217 1 10731806 237345673 1 10 152 0 9 0 1 0 0 0.23 23 0 0 23 8 9 26 8 9 57.54 99.98 0 0 4 6 Whitelist PACA-CA 0.01 0.46 0 0 0.01 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 20 0.07 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 2 2627139 227868062 1 8 152 1 6 1 0 0 0.01 1 19 0 0 19 5 13 19 5 13 57.54 93.41 6.45 0 3 4 Whitelist PACA-CA 0.28 1 0 0 0.21 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 16 0.05 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 3 175295057 175361777 2 2 152 0 0 1 1 0 0.57 0.43 1 0 0 NA NA NA 16 7 12 57.54 52.58 44.27 0 8 NA Whitelist PACA-CA 0.68 0.68 0 0 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 4 14327758 183166397 3 3 152 2 0 1 0 0 0.3 1 15 0 0 15 5 7 20 5 7 57.54 27.01 72.98 0 2 4 Whitelist PACA-CA 0.62 1 0 0 0.59 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 6 0.02 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 5 26259414 124034362 1 7 152 2 5 0 0 0 0.02 0.5 17 0 0 17 5 9 20 5 9 57.54 57.08 40.24 0 2 4 Whitelist PACA-CA 0.41 0.75 0 0 0.33 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 14 0.05 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 6 38527426 79704938 15 16 152 4 2 2 7 1 0.22 0.01 37 0 0 37 3 5 45 4 6 57.54 25.12 74.73 1 6 12 Whitelist PACA-CA 0.62 0.03 0 0 0.59 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 31 0.1 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 7 106956605 150062861 2 3 152 0 2 0 0 1 0.11 0.72 14 0 0 14 14 14 29 19 19 57.54 73.64 26.14 0 2 4 Whitelist PACA-CA 0.41 0.9 0 0 0.48 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 5 0.02 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 8 52084462 52221419 2 2 152 0 2 0 0 0 0.11 0.46 3 0 0 NA NA NA 12 3 5 57.54 31.11 65.36 0 6 8 Whitelist PACA-CA 0.54 0.7 0 0 0.48 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 9 111655341 137125038 1 2 152 0 2 0 0 0 0.11 0.53 4 NA 0 4 3 4 10 5 6 57.54 71.45 27.85 0 3 4 Whitelist PACA-CA 0.54 0.76 NA 0 0.48 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 10 997409 23898134 14 14 152 3 5 3 3 0 0.84 0 23 0 0 23 7 12 32 7 8 57.54 88.13 11.69 2 4 2 Whitelist PACA-CA 0.9 0.02 0 0 0.88 1 High confidence PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA With other complex events 28 0.09 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 11 16912461 88805074 1 4 152 0 4 0 0 0 0.01 0.56 8 0 0 8 5 8 11 5 9 57.54 99.43 0 0 3 4 Whitelist PACA-CA 0.21 0.79 0 0 0.16 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 8 0.03 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 12 41107420 120160634 7 7 152 1 0 3 3 0 0.28 0.25 27 0 0 27 22 27 31 25 31 57.54 99.98 0 3 4 6 Whitelist PACA-CA 0.62 0.49 0 0 0.59 1 High confidence PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA Before polyploidization 14 0.05 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 13 21672947 111856124 1 6 152 3 3 0 0 0 0.11 0.65 8 0 0 8 3 7 9 3 3 57.54 85.42 0.43 1 4 2 Whitelist PACA-CA 0.54 0.86 0 0 0.48 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 12 0.04 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 14 49975096 106234507 1 2 152 1 1 0 0 0 0.57 0.82 2 0 0 NA NA NA 6 4 5 57.54 6.58 78.17 0 2 4 Whitelist PACA-CA 0.68 0.96 0 0 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 15 24678806 68341661 1 3 152 1 2 0 0 0 0.3 0.8 3 0 0 NA NA NA NA NA NA 57.54 0.21 84.28 0 2 4 Whitelist PACA-CA 0.62 0.95 0 0 0.59 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 6 0.02 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 16 78585418 78962342 4 4 152 2 0 1 1 0 0.57 0.31 5 0 0 5 3 4 8 3 3 57.54 99.44 0.23 0 2 1 Whitelist PACA-CA 0.68 0.56 0 0 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 8 0.03 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 17 44000429 44568328 1 1 152 0 1 0 0 0 0.39 0.2 1 NA NA NA NA NA 4 3 3 57.54 68.22 27.34 0 3 NA Whitelist PACA-CA 0.62 0.42 NA NA 0.59 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 18 10484813 60879511 1 3 152 1 2 0 0 0 0.3 0.8 4 0 0 4 4 4 4 4 4 57.54 34.8 65.19 0 2 4 Whitelist PACA-CA 0.62 0.95 0 0 0.59 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 6 0.02 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 19 9100402 51945072 1 2 152 0 1 0 1 0 0.57 0.77 3 NA 0 NA NA NA 4 3 4 57.54 51.75 40.98 0 2 3 Whitelist PACA-CA 0.68 0.93 NA 0 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 20 31019459 38402667 1 2 152 1 1 0 0 0 0.57 0.78 5 NA 0 5 3 5 7 3 6 57.54 99.02 0 0 5 6 Whitelist PACA-CA 0.68 0.93 NA 0 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 21 40659288 45427445 1 2 152 0 2 0 0 0 0.11 0.71 4 NA 0 4 4 4 6 5 6 57.54 8.97 68.38 0 2 3 Whitelist PACA-CA 0.54 0.9 NA 0 0.48 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 22 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0217 X 6957893 73856489 1 2 152 1 1 0 0 0 0.57 0.04 4 NA 0.05 4 3 4 5 3 3 57.54 0.15 99.85 0 2 1 Whitelist PACA-CA 0.68 0.13 NA 0.05 0.64 1 No PACA-CA PCSI_0217 PACA 0.77 3.17 Panc-AdenoCA NA 4 0.01 NA 4 PACA-CA DO51520 PCSI_0217 male deceased C25.0 no treatment 73 139 139 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 4.57 PACA-CA::PCSI_0218 1 149816493 242961770 3 5 166 1 2 0 0 2 0.3 0.11 6 0 0 6 4 6 8 4 4 23.46 46.91 53.08 0 3 2 Whitelist PACA-CA 0.62 0.28 0 0 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 8 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 2 63178858 72093684 2 2 166 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA 12 9 9 23.46 26.15 73.74 0 2 NA Whitelist PACA-CA 0.68 0.12 0 0 0.64 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 3 24393715 173971431 1 10 166 2 2 0 0 6 0.26 0 4 0 0 4 3 4 5 3 3 23.46 22 77.82 0 2 1 Whitelist PACA-CA 0.68 0.02 0 0 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 14 0.04 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 4 80571773 157651994 1 9 166 1 1 1 0 6 0.8 0.04 3 0 0 NA NA NA NA NA NA 23.46 4.15 95.83 0 2 3 Whitelist PACA-CA 0.68 0.14 0 0 0.84 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 12 0.04 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 5 88142677 105526447 2 2 166 1 1 0 0 0 0.57 0.63 1 0 0 NA NA NA NA NA NA 23.46 0 99.88 0 2 NA Whitelist PACA-CA 0.68 0.84 0 0 0.64 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 6 31672093 159521441 1 3 166 2 1 0 0 0 0.3 0.14 3 0 0 NA NA NA 4 4 4 23.46 9.1 90.66 0 2 1 Whitelist PACA-CA 0.62 0.33 0 0 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 7 33881156 136452528 1 8 166 1 2 1 1 3 0.9 0.49 9 0 0 9 7 9 10 7 10 23.46 0 97.45 0 2 1 Whitelist PACA-CA 0.87 0.73 0 0 0.92 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 13 0.04 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 8 43079028 144108737 4 4 166 1 1 1 1 0 1 1 5 0 0 5 3 5 8 4 4 23.46 7.52 92.47 0 2 1 Whitelist PACA-CA 1 1 0 0 1 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 8 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 9 8784354 137855372 1 9 166 4 1 1 0 3 0.11 0.1 11 0 0 11 4 5 11 4 5 23.46 25.47 73.84 0 2 3 Whitelist PACA-CA 0.62 0.27 0 0 0.48 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 15 0.05 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 10 31036912 124119470 1 7 166 1 0 1 2 3 0.57 0.35 7 0 0 7 3 5 8 3 5 23.46 29.36 70.46 0 2 3 Whitelist PACA-CA 0.96 0.6 0 0 0.64 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 11 0.03 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 11 41953196 97461039 1 5 166 0 0 1 1 3 0.57 0.04 1 0 0 NA NA NA NA NA NA 23.46 11.04 88.38 0 2 NA Whitelist PACA-CA 0.62 0.14 0 0 0.64 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 7 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 12 8758022 116476389 1 3 166 1 1 0 1 0 0.8 0.2 5 0 0 5 3 5 6 4 4 23.46 12.51 87.41 0 2 1 Whitelist PACA-CA 0.87 0.42 0 0 0.84 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 13 46539898 102068895 1 2 166 1 0 0 0 1 0.39 0.03 3 0 NA NA NA NA 5 3 3 23.46 27.89 57.95 0 2 1 Whitelist PACA-CA 0.54 0.12 0 NA 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 3 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 14 NA NA 0 0 166 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.74 NA NA NA 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 15 NA NA 0 0 166 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.35 0 NA NA 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 16 78528151 78810919 1 1 166 1 0 0 0 0 0.39 0.46 1 0 NA NA NA NA NA NA NA 23.46 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.71 0 NA 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 17 16315504 77970295 1 6 166 2 0 0 1 3 0.3 0.47 4 0 0 4 4 4 6 5 5 23.46 25.4 74.59 0 2 3 Whitelist PACA-CA 0.62 0.71 0 0 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 9 0.03 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 18 NA NA 0 0 166 0 0 0 0 0 NA 1 NA 0.05 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 0.06 NA NA 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 19 NA NA 0 0 166 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.64 NA NA NA 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 20 14199840 14230065 1 1 166 1 0 0 0 0 0.39 0.41 1 0 NA NA NA NA NA NA NA 23.46 73.9 19.1 0 1 NA Whitelist PACA-CA 0.62 0.66 0 NA 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 21 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 22 20986957 50909752 1 1 166 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.46 0 75.45 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0218 X 69108881 120344766 3 3 166 1 0 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 23.46 96.16 3.32 0 1 NA Whitelist PACA-CA 0.87 1 0 0 0.84 0 No PACA-CA PCSI_0218 PACA 0.64 1.93 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO49419 PCSI_0218 male deceased C25.0/C25.9 chemotherapy complete response 50 681 681 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.4 PACA-CA::PCSI_0224 1 5498344 28588601 1 2 25 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 5 5 33.23 45.59 54.41 4 1 2 Whitelist PACA-CA 0.54 1 NA 0 0.48 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 4 0.08 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 2 183838435 183927036 1 1 25 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 33.23 0.04 99.86 0 2 3 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 2 0.04 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 3 159442491 159640041 1 2 25 2 0 0 0 0 0.11 0.01 4 0 0 4 3 4 7 4 7 33.23 80.79 19.09 0 3 1 Whitelist PACA-CA 0.54 0.03 0 0 0.48 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 4 0.08 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 7 99921345 100192155 1 1 25 0 0 0 1 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 33.23 0.17 99.6 0 2 3 Whitelist PACA-CA 0.62 0.64 NA NA 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 2 0.04 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 8 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 10 35025178 83546201 1 3 25 0 2 0 0 1 0.11 0.11 5 NA 0 5 4 5 6 4 4 33.23 50.29 49.53 0 1 2 Whitelist PACA-CA 0.62 0.28 NA 0 0.48 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 5 0.1 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 14 35533134 35549881 1 1 25 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 33.23 0 84.11 0 2 NA Whitelist PACA-CA 0.62 0.78 NA NA 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 2 0.04 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 15 42132719 42456929 1 1 25 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 33.23 0.32 84.27 0 2 3 Whitelist PACA-CA 0.62 0.75 NA NA 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 2 0.04 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 17 29315895 34838514 3 6 25 0 2 0 1 3 0.3 0 5 0 0 5 0 3 10 4 6 33.23 68.98 26.59 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 9 0.18 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 19 NA NA 0 0 25 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.64 NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0224 X 152819021 153085723 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 33.23 100 0 0 1 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0224 PACA 0.28 1.71 Panc-AdenoCA NA 2 0.04 stopgain,17_7578212_A_G,CN:1 1 PACA-CA DO49420 PCSI_0224 male alive C25.0 chemotherapy complete response 64 1380 1380 Current reformed smoker, duration not specified 28 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.39 PACA-CA::PCSI_0226 1 63041626 63415968 2 2 144 0 0 1 1 0 0.57 1 2 0 0 NA NA NA 22 5 8 68.54 97.03 0 0 3 5 Whitelist PACA-CA 0.68 1 0 0 0.64 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 2 141750773 142069357 3 3 144 3 0 0 0 0 0.03 0.07 2 0 0 NA NA NA 9 3 3 68.54 99.82 0.08 0 1 2 Whitelist PACA-CA 0.41 0.21 0 0 0.33 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 3 10173510 10282154 2 2 144 0 0 1 1 0 0.57 0.62 3 0 0 NA NA NA 15 5 5 68.54 52.64 44.28 0 1 2 Whitelist PACA-CA 0.68 0.84 0 0 0.64 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 4 44543293 125206961 1 6 144 2 3 0 1 0 0.34 0.4 10 0 0 10 3 7 12 3 3 68.54 65.5 34.29 10 4 5 Whitelist PACA-CA 0.62 0.65 0 0 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 5 36090216 150505452 1 2 144 1 1 0 0 0 0.57 0.01 5 NA 0 5 3 4 7 3 3 68.54 25.69 71.63 1 2 3 Whitelist PACA-CA 0.68 0.04 NA 0 0.64 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 6 2813573 33269141 1 5 144 1 3 0 0 1 0.11 0.48 8 0 0 8 3 4 13 3 6 68.54 34.28 62.88 0 4 3 Whitelist PACA-CA 0.62 0.73 0 0 0.48 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 7 69506035 69610301 1 1 144 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 4 4 68.54 92.48 5.13 0 2 3 Whitelist PACA-CA 0.62 0.04 NA NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 8 98706861 98887907 2 2 144 0 0 1 1 0 0.57 0.85 4 0 0 4 3 4 9 4 9 68.54 99.88 0 0 6 4 Whitelist PACA-CA 0.68 0.98 0 0 0.64 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 9 5876305 140065825 1 3 144 3 0 0 0 0 0.03 0.39 5 0.23 0.01 5 0 3 7 0 4 68.54 65.61 31.84 0 2 1 Whitelist PACA-CA 0.41 0.63 0.23 0.01 0.33 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 10 8351209 8385238 1 1 144 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 68.54 99.83 0 0 3 NA Whitelist PACA-CA 0.62 0.46 NA NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 11 65147123 65365770 5 5 144 2 3 0 0 0 0.14 0.23 5 0 0 5 3 5 10 3 3 68.54 99.57 0 0 1 3 Whitelist PACA-CA 0.62 0.46 0 0 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 12 6793815 132449370 23 23 144 5 4 9 5 0 0.46 0 29 0 0 29 13 19 29 13 19 68.54 99.92 0 0 3 4 Whitelist PACA-CA 0.68 0 0 0 0.64 1 High confidence PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA With other complex events 46 0.16 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 13 49269060 96426809 1 6 144 1 1 0 0 4 0.57 0.16 5 0 0 5 0 3 8 3 4 68.54 66.79 19.05 0 3 2 Whitelist PACA-CA 0.68 0.37 0 0 0.64 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 14 21792483 21860613 1 1 144 0 1 0 0 0 0.39 0.23 2 0 NA NA NA NA 7 3 7 68.54 46.9 37.19 0 3 4 Whitelist PACA-CA 0.62 0.46 0 NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 15 67024168 92593932 1 3 144 2 1 0 0 0 0.3 0.8 1 0 0 NA NA NA NA NA NA 68.54 1.19 83.28 0 2 NA Whitelist PACA-CA 0.62 0.95 0 0 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 16 1892952 89678787 1 9 144 4 5 0 0 0 0.03 0.01 15 0 0 15 5 5 16 5 5 68.54 98.85 0.31 0 3 2 Whitelist PACA-CA 0.41 0.03 0 0 0.33 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 18 0.06 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 17 75993775 76281470 1 1 144 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 68.54 58.71 36.78 0 2 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 18 37451510 37492199 1 1 144 0 1 0 0 0 0.39 0.6 2 NA NA NA NA NA 6 4 4 68.54 7.35 87.99 0 2 4 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 19 54058058 57756188 5 5 144 1 1 2 1 0 0.9 0 8 0 0 8 7 8 19 11 16 68.54 23.04 69.69 0 2 4 Whitelist PACA-CA 0.93 0 0 0 0.92 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 20 9520190 48666853 1 4 144 0 4 0 0 0 0.01 0.56 6 0 0 6 6 6 7 7 7 68.54 99.03 0 0 4 6 Whitelist PACA-CA 0.21 0.78 0 0 0.16 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 21 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 22 30321082 46586442 1 4 144 0 3 1 0 0 0.11 0.09 7 0 0 7 4 4 8 4 5 68.54 76.22 0 0 4 5 Whitelist PACA-CA 0.54 0.26 0 0 0.48 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0226 X 107333130 107527304 1 1 144 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 68.54 99.87 0.13 0 1 2 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0226 PACA 0.81 2.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578530_G_A,CN:2 4 PACA-CA DO51512 PCSI_0226 male deceased C25.1 chemotherapy disease progression 42 184 184 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.05 PACA-CA::PCSI_0227 1 12270527 222072100 1 4 79 4 0 0 0 0 0.01 1 7 0.01 0 7 6 7 8 7 7 16.64 49.68 50.31 0 1 2 Whitelist PACA-CA 0.21 1 0.01 0 0.16 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 2 23693396 234405309 9 10 79 1 3 3 2 1 0.75 0.04 2 0 0 NA NA NA NA NA NA 16.64 19.69 80.2 10 1 2 Whitelist PACA-CA 0.68 0.14 0 0 0.83 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 19 0.12 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 3 7899471 36023473 3 3 79 1 0 1 1 0 0.8 1 1 0.01 0 NA NA NA NA NA NA 16.64 0 99.95 0 2 NA Whitelist PACA-CA 0.87 1 0.01 0 0.84 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 4 81699358 183020328 1 2 79 2 0 0 0 0 0.11 0.18 1 NA 0 NA NA NA NA NA NA 16.64 0 99.99 0 2 NA Whitelist PACA-CA 0.54 0.39 NA 0 0.48 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 5 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 6 50899033 98652530 3 3 79 1 2 0 0 0 0.3 0.01 1 0 0 NA NA NA 5 5 5 16.64 1.33 98.52 0 2 NA Whitelist PACA-CA 0.62 0.04 0 0 0.59 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 7 NA NA 0 0 79 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.69 NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 8 6931831 65400843 1 3 79 2 0 0 1 0 0.3 0.8 6 0.03 0 6 6 6 7 7 7 16.64 0.63 99.37 0 1 2 Whitelist PACA-CA 0.62 0.95 0.03 0 0.59 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 9 9206282 9845003 4 4 79 4 0 0 0 0 0.01 0 3 0 0 NA NA NA 8 4 4 16.64 42.88 56.98 0 2 1 Whitelist PACA-CA 0.21 0.02 0 0 0.16 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 10 29384829 83797005 1 2 79 1 1 0 0 0 0.57 0.59 3 NA 0 NA NA NA NA NA NA 16.64 0.69 95.65 0 2 1 Whitelist PACA-CA 0.68 0.81 NA 0 0.64 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 11 107557016 107657300 2 2 79 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 5 5 5 16.64 1.08 98.5 0 2 1 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 12 10056199 119202197 1 6 79 2 0 0 0 4 0.11 0.1 1 0 0 NA NA NA NA NA NA 16.64 0 99.92 0 2 NA Whitelist PACA-CA 0.54 0.27 0 0 0.48 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 13 98044340 99065818 1 1 79 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 16.64 0 100 0 2 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 15 31652041 91042593 1 2 79 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 16.64 0 100 0 2 NA Whitelist PACA-CA 0.54 1 NA 0 0.48 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 16 6432647 78742999 1 2 79 1 1 0 0 0 0.57 1 2 NA 0.03 NA NA NA NA NA NA 16.64 0.22 99.67 0 1 2 Whitelist PACA-CA 0.68 1 NA 0.03 0.64 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 17 11545856 57079587 1 6 79 3 0 0 0 3 0.03 0.02 6 0 0 6 4 6 7 4 7 16.64 28.63 66.44 0 1 2 Whitelist PACA-CA 0.54 0.08 0 0 0.33 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 9 0.06 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 18 48148844 49011842 2 2 79 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 6 3 3 16.64 67.08 32.89 0 1 0 Whitelist PACA-CA 0.54 0.03 0 0 0.48 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 19 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 20 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0227 X 126637873 126764788 1 2 79 0 0 0 1 1 0.39 0.8 1 NA NA NA NA NA NA NA NA 16.64 100 0 3 1 NA Whitelist PACA-CA 0.68 0.95 NA NA 0.59 0 No PACA-CA PCSI_0227 PACA 0.91 1.91 Panc-AdenoCA NA 3 0.02 NA 2 PACA-CA DO51514 PCSI_0227 male deceased C25.0 chemotherapy complete response 61 1191 1191 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 39.18 PACA-CA::PCSI_0230 1 NA NA 0 0 235 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 2 233191521 233304982 1 1 235 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 19.34 0 99.9 0 2 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 3 6373116 197707682 1 5 235 1 0 1 1 2 0.8 0 3 0.02 0 NA NA NA NA NA NA 19.34 0.1 99.69 0 2 1 Whitelist PACA-CA 8 0.68 0.01 0.02 0 0.84 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 8 0.02 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 4 77864 95566459 1 3 235 2 0 1 0 0 0.3 0 3 0.12 0 NA NA NA 4 3 3 19.34 3.62 96.16 1 2 3 Whitelist PACA-CA 0.62 0.01 0.13 0 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 5 62829552 67639466 1 1 235 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 19.34 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 6 8601646 159239117 1 18 235 2 1 1 2 12 0.88 0.13 17 0 0 17 5 9 17 5 5 19.34 71.01 26.15 20 2 1 Whitelist PACA-CA 8_15_21 0.87 0.32 0 0 0.91 1 Linked to high confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA With other complex events 24 0.05 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 7 38154775 158410033 48 52 235 11 9 14 14 4 0.68 0 52 0 0 52 13 32 56 13 13 19.34 38.98 58.31 10 2 1 Whitelist PACA-CA 0.82 0 0 0 0.76 1 High confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA With other complex events 100 0.21 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 8 2303876 24989801 2 14 235 1 0 1 0 12 0.57 0 17 0 0 17 4 7 28 7 7 19.34 18.45 81.49 15 2 3 Whitelist PACA-CA 6_15_21 0.81 0 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA With other complex events 16 0.03 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 9 21974825 22661895 1 1 235 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 19.34 27.6 71.7 0 0 1 Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 10 74382417 74477888 1 1 235 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 19.34 0 99.82 0 2 NA Whitelist PACA-CA 0.62 0.05 NA NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 11 NA NA 0 0 235 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 12 114608459 132446611 2 3 235 0 1 1 0 1 0.57 0 3 0 0 NA NA NA 15 9 9 19.34 29.59 70.33 0 1 2 Whitelist PACA-CA 0.87 0 0 0 0.64 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 5 0.01 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 13 28920456 31341493 1 1 235 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 19.34 0 100 0 2 NA Whitelist PACA-CA 0.62 0.21 NA NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 14 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 15 23887647 81786260 15 66 235 3 1 6 5 51 0.27 0 21 0 0 21 13 21 25 14 15 19.34 33.92 61.28 0 2 1 Whitelist PACA-CA 6_8_21 0.98 0 0 0 0.59 1 High confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA Canonical without polyploidization 81 0.17 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 16 78354568 78842732 1 2 235 2 0 0 0 0 0.11 0.1 1 NA 0 NA NA NA NA NA NA 19.34 0 99.9 0 2 NA Whitelist PACA-CA 0.54 0.27 NA 0 0.48 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 17 77129901 77889582 1 1 235 1 0 0 0 0 0.39 0.54 2 0 NA NA NA NA 4 3 3 19.34 27.84 66.7 0 2 3 Whitelist PACA-CA 0.62 0.77 0 NA 0.59 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 18 29885709 75219927 8 10 235 2 0 4 2 2 0.26 0 20 0 0 20 5 13 25 5 7 19.34 15.36 84.27 4 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA With other complex events 18 0.04 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 19 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 20 NA NA 0 0 235 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.21 NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 21 24156719 42334957 7 57 235 1 3 2 1 50 0.67 0 12 0 0 12 8 12 15 8 8 19.34 33.01 44.35 0 2 1 Whitelist PACA-CA 8 0.93 0 0 0 0.74 1 High confidence PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA Canonical without polyploidization 64 0.14 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 22 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0230 X NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0230 PACA 0.92 1.83 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51478 PCSI_0230 male deceased C25.0 combined chemo+radiation therapy disease progression 69 311 311 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.23 PACA-CA::PCSI_0233 1 197610230 197630075 1 1 71 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA 6 6 6 66.1 53.75 46.25 0 2 3 Whitelist PACA-CA 0.62 0.15 NA NA 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 2 NA NA 0 0 71 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 3 100914778 109198040 2 6 71 0 1 0 1 4 0.57 0 4 0 0 4 4 4 5 4 5 66.1 99.83 0 0 4 5 Whitelist PACA-CA 8 0.93 0.01 0 0 0.64 0 Linked to low confidence PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA After polyploidization 8 0.06 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 4 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 5 44722600 44834488 1 1 71 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 66.1 99.8 0.06 0 2 3 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 6 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 7 95719637 138963053 1 3 71 1 0 1 0 1 0.57 0.79 5 0 0 5 3 5 10 4 4 66.1 92.87 4.58 0 3 2 Whitelist PACA-CA 0.62 0.94 0 0 0.64 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 8 32367518 100716200 6 15 71 1 2 2 1 9 0.88 0 19 0 0 19 6 15 22 6 16 66.1 73.88 22.7 0 4 5 Whitelist PACA-CA 0.65 0 0 0 0.91 0 Low confidence PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA With other complex events 21 0.15 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 9 21755342 22041690 1 1 71 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 66.1 0.2 99.64 0 0 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 10 134439697 134976518 2 2 71 1 0 0 1 0 0.57 1 3 0 0 NA NA NA 4 0 3 66.1 98.63 1.2 2 1 2 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 11 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 12 113035438 113049371 1 2 71 0 0 1 0 1 0.39 0.78 2 NA NA NA NA NA 4 0 0 66.1 80.71 15.55 0 2 3 Whitelist PACA-CA 0.68 0.93 NA NA 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 13 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 14 NA NA 0 0 71 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 16 55011504 79226419 1 2 71 1 1 0 0 0 0.57 0.44 1 NA 0 NA NA NA NA NA NA 66.1 99.91 0 0 4 NA Whitelist PACA-CA 0.68 0.69 NA 0 0.64 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 17 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 18 6611362 22580219 8 8 71 3 0 1 4 0 0.17 0 19 0 0 19 4 8 25 4 4 66.1 94.37 0.92 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 16 0.11 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 19 32396625 40015587 1 2 71 0 0 1 0 1 0.39 0.65 3 NA NA NA NA NA 6 6 6 66.1 45.68 47.04 0 2 3 Whitelist PACA-CA 0.68 0.86 NA NA 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 20 21685130 47866871 1 5 71 1 0 0 1 3 0.57 0 13 0 0 13 3 3 19 3 5 66.1 67.4 31.63 0 4 30 Whitelist PACA-CA 0.93 0 0 0 0.64 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 21 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 22 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0233 X 677023 132577277 3 5 71 0 2 0 1 2 0.3 0.09 5 0.01 0 5 3 5 6 3 5 66.1 89.38 10.18 0 1 2 Whitelist PACA-CA 0.62 0.25 0.01 0 0.59 0 No PACA-CA PCSI_0233 PACA 0.26 2.92 Panc-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577117_G_A,CN:2 3 PACA-CA DO51523 PCSI_0233 male deceased combined chemo+radiation therapy complete response 48 318 317 Smoking history not documented 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.46 PACA-CA::PCSI_0235 1 66742537 71939226 2 3 75 0 0 0 2 1 0.11 0.39 6 0 0 6 4 6 14 6 6 82.15 95.94 1.09 0 4 5 Whitelist PACA-CA 0.62 0.63 0 0 0.48 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 5 0.03 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 2 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 3 21388549 57703753 2 4 75 2 1 0 1 0 0.57 0 5 0 0 5 0 4 27 11 17 82.15 89.56 10.32 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 8 0.05 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 4 91860808 133902854 1 3 75 2 1 0 0 0 0.3 0.49 5 0 0 5 3 5 5 3 3 82.15 99.27 0.57 0 4 2 Whitelist PACA-CA 0.62 0.73 0 0 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 6 0.04 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 5 11530299 164007803 2 4 75 0 0 2 2 0 0.26 0.47 10 0 0 10 5 10 11 5 11 82.15 98.95 0.94 1 5 3 Whitelist PACA-CA 0.62 0.72 0 0 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 8 0.05 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 6 22821849 82272149 1 5 75 4 0 1 0 0 0.04 0.22 10 0 0 10 10 10 13 13 13 82.15 3.45 96.31 1 1 2 Whitelist PACA-CA 0.45 0.45 0 0 0.36 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 10 0.07 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 7 20235134 94299306 1 2 75 1 1 0 0 0 0.57 0.44 4 NA 0 4 3 4 5 3 3 82.15 98.63 1.14 0 5 2 Whitelist PACA-CA 0.68 0.69 NA 0 0.64 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 4 0.03 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 8 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 9 105830073 106503697 1 1 75 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 82.15 99.29 0 0 0 3 Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 2 0.01 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 10 13900770 111800167 1 6 75 3 0 0 0 3 0.03 0.16 5 0 0 5 0 3 6 3 4 82.15 98.73 1.09 11 2 4 Whitelist PACA-CA 6 0.54 0.37 0 0 0.33 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 9 0.06 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 11 80828755 80972035 2 2 75 0 0 1 1 0 0.57 0.4 1 0 0 NA NA NA 5 5 5 82.15 99.44 0 0 3 NA Whitelist PACA-CA 0.68 0.65 0 0 0.64 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 4 0.03 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 12 54945192 123713348 1 3 75 3 0 0 0 0 0.03 1 6 0 0 6 6 6 7 7 7 82.15 95.09 4.82 0 2 4 Whitelist PACA-CA 0.41 1 0 0 0.33 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 6 0.04 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 13 25466782 96604585 1 6 75 4 2 0 0 0 0.06 0.01 12 0 0 12 3 4 13 3 4 82.15 98.56 1.44 1 5 4 Whitelist PACA-CA 0.54 0.06 0 0 0.48 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 12 0.08 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 14 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 15 64952238 64989037 1 1 75 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 82.15 95.09 0 0 4 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 2 0.01 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 16 78684444 83763072 1 2 75 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 7 3 7 82.15 85.85 8.73 0 3 0 Whitelist PACA-CA 0.54 1 NA 0 0.48 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 4 0.03 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 17 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 18 8867663 50863265 1 2 75 2 0 0 0 0 0.11 1 4 NA 0.03 4 4 4 5 5 5 82.15 99.96 0 0 0 3 Whitelist PACA-CA 0.54 1 NA 0.03 0.48 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 4 0.03 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 19 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 20 14750147 15100627 1 3 75 3 0 0 0 0 0.03 0.08 4 0 0 4 4 4 5 5 5 82.15 99.01 0 0 3 4 Whitelist PACA-CA 0.41 0.23 0 0 0.33 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 6 0.04 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 21 36138578 41517756 1 1 75 0 1 0 0 0 0.39 0.23 3 NA 0 NA NA NA 6 3 3 82.15 24.35 53.01 0 2 4 Whitelist PACA-CA 0.62 0.47 NA 0 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 2 0.01 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 22 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0235 X 7451898 121816570 1 3 75 2 1 0 0 0 0.3 0.79 2 0 0 NA NA NA NA NA NA 82.15 0.09 99.91 5 2 4 Whitelist PACA-CA 0.62 0.94 0 0 0.59 0 No PACA-CA PCSI_0235 PACA 0.25 3.58 Panc-AdenoCA NA 6 0.04 stopgain,17_7577022_A_G,CN:2 4 PACA-CA DO51533 PCSI_0235 male alive combined chemo+radiation therapy complete response 67 4173 4173 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 137.27 PACA-CA::PCSI_0239 1 19303813 191941618 1 4 111 3 0 0 0 1 0.03 0.22 7 0.01 0 7 4 7 8 5 5 23.19 46.74 53.26 3 2 1 Whitelist PACA-CA 0.21 0.45 0.01 0 0.33 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 2 52871008 241102049 1 12 111 6 0 1 1 4 0.01 0.23 14 0 0 14 7 14 15 7 7 23.19 0.95 98.96 0 2 1 Whitelist PACA-CA 13 0.54 0.46 0 0 0.21 1 Linked to high confidence PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA With other complex events 20 0.09 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 3 22365795 31863611 5 5 111 2 0 2 1 0 0.53 0.13 7 0 0 7 4 7 13 8 8 23.19 5.74 94.21 3 1 2 Whitelist PACA-CA 0.68 0.32 0 0 0.64 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 4 33126224 179897670 1 8 111 5 0 0 0 3 0 0.85 9 0 0 9 9 9 10 10 10 23.19 1.56 98.25 2 2 1 Whitelist PACA-CA 13 0.54 0.98 0 0 0.07 1 Linked to high confidence PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA Canonical without polyploidization 13 0.06 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 5 79030202 98699176 4 4 111 0 1 1 2 0 0.57 0.69 3 0 0 NA NA NA 7 7 7 23.19 1.16 98.7 2 1 2 Whitelist PACA-CA 0.68 0.89 0 0 0.64 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 6 153183563 167557246 1 2 111 2 0 0 0 0 0.11 0.07 6 NA 0 6 6 6 7 7 7 23.19 1.39 98.46 0 1 2 Whitelist PACA-CA 0.54 0.21 NA 0 0.48 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 7 149505627 149762629 1 1 111 1 0 0 0 0 0.39 0.53 2 0 NA NA NA NA 6 3 3 23.19 10.62 89.15 0 0 1 Whitelist PACA-CA 0.62 0.76 0 NA 0.59 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 8 NA NA 0 0 111 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.16 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 9 15702845 96072424 1 7 111 4 0 0 0 3 0.01 0.21 11 0 0 11 6 11 12 6 6 23.19 18.59 80.71 0 1 2 Whitelist PACA-CA 0.47 0.44 0 0 0.16 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 11 0.05 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 10 18990479 117518627 1 2 111 2 0 0 0 0 0.11 0.25 4 NA 0 4 4 4 5 5 5 23.19 1 98.82 0 1 2 Whitelist PACA-CA 0.54 0.49 NA 0 0.48 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 11 2331191 132951635 1 3 111 3 0 0 0 0 0.03 0.5 6 0.01 0 6 6 6 7 7 7 23.19 19.64 79.93 2 1 2 Whitelist PACA-CA 0.41 0.74 0.01 0 0.33 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 12 132281111 132473519 1 1 111 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 23.19 0.14 99.77 0 1 2 Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 13 19829855 23893773 37 39 111 6 10 11 10 2 0.66 0 45 0 0 45 17 45 53 17 17 23.19 96.64 3.36 10 2 1 Whitelist PACA-CA 4 0.7 0 0 0 0.74 1 High confidence PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA With other complex events 76 0.34 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 14 101025719 101139358 1 1 111 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 5 3 3 23.19 1.34 94.95 0 1 2 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 15 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 16 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 17 NA NA 0 0 111 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 18 NA NA 0 0 111 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 19 NA NA 0 0 111 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 20 NA NA 0 0 111 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 21 NA NA 0 0 111 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.36 NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 22 NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0239 X NA NA 0 0 111 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0239 PACA 0.64 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51544 PCSI_0239 male deceased combined chemo+radiation therapy complete response 69 234 233 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.7 PACA-CA::PCSI_0240 1 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 2 116516005 116780360 2 2 65 1 0 1 0 0 0.57 0.66 3 0 0 NA NA NA 5 5 5 79.89 99.7 0.19 0 3 2 Whitelist PACA-CA 0.68 0.87 0 0 0.64 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 3 NA NA 0 0 65 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.58 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 4 128394573 128792030 2 2 65 0 0 1 1 0 0.57 0.62 4 0 0 4 4 4 11 11 11 79.89 97.91 2.07 1 2 4 Whitelist PACA-CA 0.68 0.84 0 0 0.64 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 5 NA NA 0 0 65 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.41 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 6 34693773 34724534 1 1 65 0 1 0 0 0 0.39 0.6 2 0 NA NA NA NA 6 6 6 79.89 99.83 0 0 3 4 Whitelist PACA-CA 0.62 0.81 0 NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 7 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 8 10887398 10900321 1 1 65 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 79.89 99.99 0 0 4 6 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 9 21483345 22272731 1 1 65 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 5 3 5 79.89 2.72 94.7 0 0 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 10 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 11 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 12 NA NA 0 0 65 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 13 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 14 33997119 46764071 1 1 65 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 79.89 55.53 43.56 0 2 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 15 NA NA 0 0 65 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 16 6398613 7374434 1 1 65 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 79.89 98.83 1.08 0 2 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 17 57774670 57979912 3 3 65 2 1 0 0 0 0.3 0.01 3 0 0 NA NA NA 11 3 6 79.89 72.12 22.5 0 2 3 Whitelist PACA-CA 0.62 0.04 0 0 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 18 26982777 48929344 1 7 65 1 0 1 0 5 0.57 0 8 0 0 8 3 6 17 5 5 79.89 23.76 70.72 0 2 4 Whitelist PACA-CA 21 0.77 0 0 0 0.64 0 Linked to low confidence PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA With other complex events 9 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 19 11133425 11160954 1 1 65 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 3 5 79.89 49.17 43.55 0 2 5 Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 20 14874914 15103179 1 1 65 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 79.89 99.03 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 21 23137397 41798616 8 17 65 3 2 1 2 9 0.8 0 18 0 0 18 6 10 28 7 14 79.89 32.42 44.93 0 2 4 Whitelist PACA-CA 0.93 0 0 0 0.84 0 Low confidence PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA With other complex events 25 0.19 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 22 NA NA 0 0 65 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0240 X 94163543 140482733 1 2 65 2 0 0 0 0 0.11 0.77 4 NA 0 4 3 4 5 3 5 79.89 0.14 99.86 0 2 0 Whitelist PACA-CA 0.54 0.93 NA 0 0.48 0 No PACA-CA PCSI_0240 PACA 0.65 3.53 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:2 4 PACA-CA DO51540 PCSI_0240 female deceased combined chemo+radiation therapy complete response 69 141 146 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.64 PACA-CA::PCSI_0248 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 9 33303795 35007058 3 4 7 1 2 0 0 1 0.3 0 6 0 0 6 3 3 9 4 4 0.34 2.02 97.81 0 4 3 Whitelist PACA-CA 0.68 0 0 0 0.59 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 7 0.5 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 11 NA NA 0 0 7 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0248 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0248 PACA 0.31 2.01 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51508 PCSI_0248 female C25 chemotherapy complete response 83 NA 150 Current reformed smoker, duration not specified 0 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 0 4.93 PACA-CA::PCSI_0250 1 84493147 150784733 1 4 64 1 1 0 0 2 0.57 1 4 0 0 4 3 4 4 3 3 27.27 0.3 96.73 0 2 5 Whitelist PACA-CA 1 1 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 6 0.05 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 2 1459737 197004495 1 11 64 2 2 0 0 7 0.26 0 15 0 0 15 3 7 17 3 9 27.27 1.35 95.61 0 2 3 Whitelist PACA-CA 0.62 0.01 0 0 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 15 0.12 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 3 28741994 191691744 1 6 64 2 1 1 0 2 0.57 0.22 4 0 0 4 3 4 6 3 4 27.27 28.27 71.65 0 2 1 Whitelist PACA-CA 0.93 0.45 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 10 0.08 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 4 2121870 125833785 1 2 64 1 0 1 0 0 0.57 0.45 6 NA 0 6 4 5 12 4 9 27.27 67.61 30.02 0 1 3 Whitelist PACA-CA 0.68 0.69 NA 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 5 68764133 153010081 1 6 64 2 1 1 2 0 0.88 0.06 8 0 0 8 5 8 9 5 9 27.27 20.31 79.57 0 2 3 Whitelist PACA-CA 0.93 0.19 0 0 0.91 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 12 0.09 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 6 69606228 70118079 1 1 64 1 0 0 0 0 0.39 0.44 2 0 NA NA NA NA 9 5 7 27.27 73.62 26.23 0 1 2 Whitelist PACA-CA 0.62 0.69 0 NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 7 65524887 125642517 1 2 64 1 1 0 0 0 0.57 1 7 0 0 7 5 7 7 5 5 27.27 0.14 99.64 0 2 4 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 8 29197882 40635066 2 2 64 1 1 0 0 0 0.57 0.04 1 0 0 NA NA NA 5 3 3 27.27 30.44 69.55 0 2 NA Whitelist PACA-CA 0.68 0.15 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 9 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 10 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 11 102595672 102660371 1 1 64 0 1 0 0 0 0.39 0.54 2 0 NA NA NA NA 7 5 5 27.27 0.24 99.18 0 2 4 Whitelist PACA-CA 0.62 0.77 0 NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 12 56421525 56532334 1 1 64 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.27 0.08 99.83 0 2 6 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 13 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 14 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 15 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 16 6363284 74259732 1 3 64 1 0 1 0 1 0.57 0.24 6 NA 0 6 3 6 8 4 4 27.27 78.22 17.06 0 1 0 Whitelist PACA-CA 0.62 0.48 NA 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 17 68665432 68678297 1 1 64 1 0 0 0 0 0.39 0.69 2 NA NA NA NA NA 6 4 6 27.27 27.35 68.2 0 1 2 Whitelist PACA-CA 0.62 0.89 NA NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 18 30596077 48579227 1 1 64 0 0 1 0 0 0.39 0.69 1 NA NA NA NA NA NA NA NA 27.27 99.96 0 0 1 NA Whitelist PACA-CA 0.62 0.89 NA NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 19 22735886 37039976 1 2 64 1 0 0 1 0 0.57 0.01 4 0 0 4 0 3 7 3 3 27.27 26.66 66.06 0 1 2 Whitelist PACA-CA 0.68 0.04 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 20 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 21 18268353 18279358 1 1 64 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 27.27 0 77.35 0 2 NA Whitelist PACA-CA 0.62 0.77 NA NA 0.59 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 22 NA NA 0 0 64 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0250 X 35678335 35693705 2 2 64 0 0 1 1 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 27.27 13.87 85.91 0 2 NA Whitelist PACA-CA 0.68 0.5 0 0 0.64 0 No PACA-CA PCSI_0250 PACA 0.16 1.81 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578203_A_C,CN:1 2 PACA-CA DO51486 PCSI_0250 female alive C25 chemotherapy unknown 56 518 518 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 17.04 PACA-CA::PCSI_0253 1 94057514 94176130 1 1 15 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.93 0 100 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 2 0.07 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 2 NA NA 0 0 15 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 8 103885996 146291839 4 4 15 1 2 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 17.93 29.44 67.09 0 2 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 8 0.27 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 9 26588849 29251875 1 1 15 0 1 0 0 0 0.39 0.45 3 NA NA NA NA NA 6 3 3 17.93 31.73 65.18 0 3 5 Whitelist PACA-CA 0.62 0.7 NA NA 0.59 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 2 0.07 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 12 20370105 32531720 3 3 15 1 0 2 0 0 0.3 0.03 1 0 0 NA NA NA NA NA NA 17.93 83.45 12.81 0 2 NA Whitelist PACA-CA 0.62 0.11 0 0 0.59 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 6 0.2 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 15 29357098 33706940 1 2 15 0 1 0 0 1 0.39 0.06 2 NA NA NA NA NA NA NA NA 17.93 13.22 71.37 0 1 2 Whitelist PACA-CA 0.68 0.19 NA NA 0.59 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 3 0.1 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 18 NA NA 0 0 15 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0253 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0253 PACA 0.17 1.83 Panc-AdenoCA NA 0 0 stopgain,17_7574003_A_G,CN:1 1 PACA-CA DO51488 PCSI_0253 female alive C25.2 chemotherapy complete response 55 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0256 1 50215495 181210805 1 4 26 2 0 0 0 2 0.11 0.05 6 0 0 6 6 6 7 7 7 16.25 0.24 99.76 0 1 2 Whitelist PACA-CA 8 0.68 0.16 0 0 0.48 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 6 0.12 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 3 NA NA 0 0 26 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.67 NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 6 115385935 115844736 2 4 26 0 0 1 1 2 0.57 0 4 0 0 4 3 4 13 5 5 16.25 34.57 62.59 10 2 1 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 6 0.12 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 7 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 8 36699706 43477928 1 3 26 3 0 0 0 0 0.03 0 6 0 0 6 6 6 8 8 8 16.25 25.55 71.02 1 1 2 Whitelist PACA-CA 0.41 0 0 0 0.33 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 6 0.12 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 11 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 12 NA NA 0 0 26 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.6 NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 18 10161852 20047788 1 1 26 0 1 0 0 0 0.39 0 5 0 0 5 0 3 7 0 0 16.25 88.65 6.71 0 2 4 Whitelist PACA-CA 0.62 0.03 0 0 0.59 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 2 0.04 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 19 NA NA 0 0 26 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.25 NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0256 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0256 PACA 0.21 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51477 PCSI_0256 male alive C25 chemotherapy complete response 56 504 504 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Not Documented Included Panc-AdenoCA PACA CA 1 16.58 PACA-CA::PCSI_0261 1 26694516 243410457 6 10 382 2 3 1 0 4 0.34 0.63 14 0 0 14 3 7 19 4 8 66.04 94.05 5.94 1 4 3 Whitelist PACA-CA 0.62 0.85 0 0 0.59 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 16 0.02 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 2 143484174 151012579 7 13 382 0 1 3 3 6 0.28 0.01 10 0 0 10 4 8 33 10 11 66.04 52.83 47.07 0 3 4 Whitelist PACA-CA 0.9 0.03 0 0 0.59 1 Low confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 20 0.03 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 3 947709 159588075 2 8 382 0 0 2 2 4 0.26 0.27 16 0 0 16 6 13 23 6 8 66.04 98.65 1.23 2 3 4 Whitelist PACA-CA 0.87 0.51 0 0 0.59 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 12 0.02 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 4 67443335 187140838 41 47 382 12 14 9 6 6 0.31 0 58 0 0 58 9 20 64 9 9 66.04 52.63 47.33 23 4 3 Whitelist PACA-CA 9 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 88 0.12 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 5 55427909 147893239 18 26 382 6 4 4 4 8 0.88 0 19 0 0 19 4 13 32 4 7 66.04 72.99 26.85 5 1 2 Whitelist PACA-CA 0.75 0 0 0 0.91 1 Low confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 44 0.06 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 6 23150525 169084665 1 10 382 3 2 1 0 4 0.34 0.24 11 0 0 11 6 8 13 6 8 66.04 49.94 49.93 2 2 4 Whitelist PACA-CA 0.62 0.47 0 0 0.59 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 16 0.02 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 7 90750138 105295873 3 3 382 2 1 0 0 0 0.3 0 1 0 0 NA NA NA 29 5 10 66.04 98.97 0.81 2 4 NA Whitelist PACA-CA 0.62 0.01 0 0 0.59 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 8 47403900 133181064 7 11 382 2 2 2 1 4 0.93 0.41 18 0 0 18 4 11 21 4 11 66.04 44.57 55.42 2 2 3 Whitelist PACA-CA 12 0.87 0.66 0 0 0.95 1 Low confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 18 0.02 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 9 9041105 26051501 2 4 382 3 1 0 0 0 0.11 1 13 0 0 13 5 6 20 5 6 66.04 1.29 98.6 0 2 1 Whitelist PACA-CA 0.54 1 0 0 0.48 1 Linked to high confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 8 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 10 82802056 82815284 1 1 382 1 0 0 0 0 0.39 0.07 2 0 NA NA NA NA 4 3 3 66.04 99.79 0 0 1 3 Whitelist PACA-CA 0.62 0.2 0 NA 0.59 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 11 37133426 41217137 3 3 382 1 0 1 1 0 0.8 0.9 4 0 0 4 3 4 11 3 7 66.04 84.53 15.05 0 1 2 Whitelist PACA-CA 0.87 1 0 0 0.84 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 12 34059230 90708384 2 7 382 0 1 1 2 3 0.57 0.05 9 0 0 9 5 9 9 5 5 66.04 72.74 23.52 2 2 3 Whitelist PACA-CA 0.62 0.17 0 0 0.64 1 Linked to low confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 11 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 13 82242060 109617514 1 6 382 1 3 0 0 2 0.11 0.05 7 0 0 7 3 7 7 3 3 66.04 93.84 6.16 0 3 4 Whitelist PACA-CA 0.54 0.16 0 0 0.48 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 10 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 14 NA NA 0 0 382 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.01 NA NA NA 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 15 84178693 84277076 2 2 382 0 0 1 1 0 0.57 1 4 0 0 4 4 4 15 5 5 66.04 0.26 99.6 0 0 2 Whitelist PACA-CA 0.68 1 0 0 0.64 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 16 78726216 79105930 3 3 382 3 0 0 0 0 0.03 0.21 3 0 0 NA NA NA 20 5 7 66.04 94.56 0.53 0 1 3 Whitelist PACA-CA 0.41 0.43 0 0 0.33 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 17 1002117 68869838 1 12 382 1 3 2 1 5 0.67 0.15 14 0 0 14 6 6 15 6 6 66.04 68.3 27.25 3 4 5 Whitelist PACA-CA 0.93 0.35 0 0 0.74 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 19 0.02 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 18 8939813 74242436 13 15 382 4 1 5 3 2 0.44 0 33 0 0 33 15 18 36 15 15 66.04 94.66 0.01 9 3 1 Whitelist PACA-CA 0.73 0 0 0 0.64 1 High confidence PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA With other complex events 28 0.04 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 19 7571593 47360220 1 3 382 0 3 0 0 0 0.03 1 8 0 0 8 3 6 12 3 5 66.04 92.71 0.02 0 4 5 Whitelist PACA-CA 0.41 1 0 0 0.33 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 20 NA NA 0 0 382 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 21 NA NA 0 0 382 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.85 NA NA NA 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 22 NA NA 0 0 382 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0261 X 12377095 145843071 1 2 382 1 1 0 0 0 0.57 0 2 0 0 NA NA NA NA NA NA 66.04 99.76 0.01 0 1 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0261 PACA 0.55 2.88 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51493 PCSI_0261 female deceased combined chemo+radiation therapy complete response 52 512 512 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 16.84 PACA-CA::PCSI_0263 1 NA NA 0 0 44 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.5 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 2 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 3 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 4 NA NA 0 0 44 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 5 22221552 22232052 1 1 44 1 0 0 0 0 0.39 0.75 1 NA NA NA NA NA NA NA NA 79.42 99.86 0 0 4 NA Whitelist PACA-CA 0.62 0.92 NA NA 0.59 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 6 6975914 64482641 1 4 44 0 1 1 0 2 0.57 0.02 2 0 0 NA NA NA 6 3 3 79.42 40.4 59.46 0 2 4 Whitelist PACA-CA 0.68 0.06 0 0 0.64 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 6 0.07 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 7 28128087 95524505 1 2 44 0 2 0 0 0 0.11 0.51 3 NA 0 NA NA NA NA NA NA 79.42 99.77 0 0 4 5 Whitelist PACA-CA 0.54 0.75 NA 0 0.48 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 8 20498015 30344087 1 2 44 1 0 0 1 0 0.57 0.49 3 NA 0 NA NA NA 7 3 3 79.42 97.6 2.39 0 1 2 Whitelist PACA-CA 0.68 0.73 NA 0 0.64 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 9 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 10 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 11 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 12 59154482 59959204 1 1 44 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 79.42 4.84 95.07 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 13 46041654 80516134 1 1 44 0 0 0 1 0 0.39 0.06 3 0 NA NA NA NA 5 5 5 79.42 99.84 0 0 5 4 Whitelist PACA-CA 0.62 0.2 0 NA 0.59 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 16 74933538 87317831 1 4 44 2 0 0 1 1 0.3 0 6 0 0 6 4 6 9 6 6 79.42 53.97 45.94 0 2 4 Whitelist PACA-CA 0.68 0 0 0 0.59 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 7 0.08 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 17 30788279 46098653 1 7 44 2 0 2 1 2 0.53 0 16 0 0 16 4 5 24 4 5 79.42 51.07 44.49 0 6 7 Whitelist PACA-CA 0.96 0 0 0 0.64 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 12 0.14 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 18 NA NA 0 0 44 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.58 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 20 NA NA 0 0 44 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 22 49908971 50101111 2 2 44 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 5 0 3 79.42 88.89 0 0 6 9 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0263 X NA NA 0 0 44 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0263 PACA 0.25 3.16 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577569_G_A,CN:2 3 PACA-CA DO51528 PCSI_0263 male alive chemotherapy complete response 62 2325 2325 Smoking history not documented 58 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 76.48 PACA-CA::PCSI_0264 1 20843638 240719810 1 3 52 2 1 0 0 0 0.3 0.8 7 0 0 7 3 5 8 3 3 14.42 14.49 85.51 1 3 1 Whitelist PACA-CA 0.62 0.95 0 0 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 2 65236250 205558324 1 7 52 2 0 1 0 4 0.3 0.08 7 0 0 7 5 7 10 5 5 14.42 30.52 69.38 1 2 1 Whitelist PACA-CA 0.62 0.22 0 0 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 10 0.1 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 3 32183176 34913535 6 6 52 2 1 2 1 0 0.88 0 3 0 0 NA NA NA 14 3 5 14.42 26.3 73.58 0 1 2 Whitelist PACA-CA 0.93 0 0 0 0.91 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 12 0.12 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 4 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 5 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 6 152625122 153176712 1 1 52 0 0 0 1 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 14.42 0 99.85 0 2 NA Whitelist PACA-CA 0.62 0.93 NA NA 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 7 NA NA 0 0 52 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.43 NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 8 NA NA 0 0 52 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.92 NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 9 294089 122143133 1 7 52 1 2 0 0 4 0.3 0 9 0 0 9 4 4 10 4 5 14.42 21.54 77.76 0 1 2 Whitelist PACA-CA 0.77 0 0 0 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 10 0.1 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 10 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 11 NA NA 0 0 52 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.55 NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 12 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 13 49026759 91853692 2 2 52 0 0 1 1 0 0.57 0.7 1 NA 0 NA NA NA NA NA NA 14.42 0 100 0 2 NA Whitelist PACA-CA 0.68 0.9 NA 0 0.64 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 14 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 15 20112624 102039621 1 3 52 0 1 0 0 2 0.39 0.17 3 NA 0 NA NA NA NA NA NA 14.42 99.52 0 0 3 5 Whitelist PACA-CA 0.87 0.39 NA 0 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 17 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 18 28172638 42937173 1 1 52 1 0 0 0 0 0.39 0.05 1 0 NA NA NA NA 5 0 4 14.42 69.42 30.55 0 2 NA Whitelist PACA-CA 0.62 0.16 0 NA 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 19 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 20 NA NA 0 0 52 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.27 NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 21 15788199 15816864 1 1 52 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 4 3 3 14.42 69.99 7.36 0 0 1 Whitelist PACA-CA 0.62 0.72 NA NA 0.59 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 22 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0264 X 63034017 150429658 1 8 52 1 0 1 1 5 0.8 0 1 0 0 NA NA NA NA NA NA 14.42 0 99.77 0 2 NA Whitelist PACA-CA 0.62 0.02 0 0 0.84 0 No PACA-CA PCSI_0264 PACA 0.66 1.95 Panc-AdenoCA NA 11 0.11 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51483 PCSI_0264 female deceased no treatment 67 107 112 Smoking history not documented 8 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 3.52 PACA-CA::PCSI_0268 1 1109651 22405832 7 14 104 0 2 3 2 7 0.44 0 34 0 0 34 4 5 47 5 7 44.27 70.87 26.11 0 3 1 Whitelist PACA-CA 0.62 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA With other complex events 21 0.1 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 2 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 3 183909628 184140907 2 2 104 0 2 0 0 0 0.11 0.17 4 0 0 4 0 3 12 9 9 44.27 23.53 76.35 0 2 3 Whitelist PACA-CA 0.54 0.39 0 0 0.48 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 4 7948280 8012764 1 1 104 0 1 0 0 0 0.39 0.05 2 NA 0 NA NA NA 5 3 3 44.27 36.4 61.06 0 1 2 Whitelist PACA-CA 0.62 0.16 NA 0 0.59 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 5 14265774 14473669 1 1 104 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 44.27 0.11 99.77 0 1 2 Whitelist PACA-CA 0.62 0.09 NA NA 0.59 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 6 162592793 162623811 1 1 104 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 3 5 44.27 99.83 0.02 0 1 3 Whitelist PACA-CA 0.62 0.09 NA NA 0.59 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 7 53545502 64430005 1 2 104 0 0 1 1 0 0.57 0.27 5 0 0 5 4 5 8 5 5 44.27 83.64 13.81 0 2 3 Whitelist PACA-CA 0.68 0.52 0 0 0.64 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 8 42317765 66118512 2 3 104 1 0 1 0 1 0.57 0.11 5 0 0 5 4 5 6 4 6 44.27 83.73 12.31 0 2 3 Whitelist PACA-CA 0.87 0.29 0 0 0.64 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 9 29093418 73752667 1 3 104 1 1 1 0 0 0.8 0.8 9 0 0 9 5 8 11 5 8 44.27 77.36 21.94 0 1 2 Whitelist PACA-CA 0.87 0.95 0 0 0.84 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 10 126851447 127077192 14 14 104 3 3 4 4 0 0.96 0 8 0 0 8 5 7 8 5 7 44.27 0.17 99.66 0 3 2 Whitelist PACA-CA 0.98 0 0 0 0.98 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 28 0.13 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 11 NA NA 0 0 104 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.48 NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 12 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 13 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 14 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 15 91965662 92315043 1 1 104 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 3 3 44.27 15.75 79.47 0 1 2 Whitelist PACA-CA 0.62 0.63 NA NA 0.59 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 16 331412 78698254 1 4 104 2 1 0 1 0 0.57 0.36 2 0.02 0 NA NA NA NA NA NA 44.27 0.12 99.78 0 2 5 Whitelist PACA-CA 0.68 0.62 0.02 0 0.64 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 17 38700576 75379490 1 3 104 0 0 2 0 1 0.11 0.37 7 0 0 7 4 7 9 6 6 44.27 74.35 21.21 0 1 2 Whitelist PACA-CA 0.62 0.62 0 0 0.48 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 18 21932939 22135424 3 3 104 0 1 2 0 0 0.3 0 7 0 0 7 4 4 17 4 6 44.27 78.68 16.36 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 19 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 20 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 21 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 22 NA NA 0 0 104 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0268 X NA NA 0 0 104 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 0 No PACA-CA PCSI_0268 PACA 0.67 2.21 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 3 PACA-CA DO51480 PCSI_0268 female deceased combined chemo+radiation therapy complete response 41 228 228 Smoking history not documented 78 no None Included Panc-AdenoCA PACA CA 1 7.5 PACA-CA::PCSI_0269 1 753758 231554730 1 4 56 2 1 0 0 1 0.3 1 8 0.58 0 8 6 7 9 6 7 37.95 44.88 55.12 0 2 3 Whitelist PACA-CA 0.54 1 0.58 0 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 7 0.06 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 2 166596198 202527050 1 3 56 0 3 0 0 0 0.03 0.23 5 0 0 5 5 5 7 7 7 37.95 0.1 99.8 0 2 3 Whitelist PACA-CA 0.41 0.47 0 0 0.33 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 6 0.05 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 3 4133848 172809069 1 7 56 2 2 1 0 2 0.53 0.06 10 0 0 10 5 6 12 5 6 37.95 80.84 19.13 3 1 2 Whitelist PACA-CA 0.62 0.18 0 0 0.64 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 12 0.11 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 4 22940515 106638402 1 4 56 0 4 0 0 0 0.01 0.42 9 0 0 9 5 9 11 6 6 37.95 35.6 62.01 0 2 1 Whitelist PACA-CA 0.21 0.67 0 0 0.16 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 8 0.07 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 5 20351110 172532777 1 8 56 1 1 0 0 6 0.57 0.01 11 0 0 11 6 9 12 6 10 37.95 25.9 73.97 0 2 1 Whitelist PACA-CA 2 0.87 0.04 0 0 0.64 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 10 0.09 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 6 NA NA 0 0 56 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.93 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 7 NA NA 0 0 56 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 8 102525568 138587304 1 2 56 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 6 4 4 37.95 29.41 67.06 0 2 1 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 9 21318463 25716812 1 1 56 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 37.95 3.11 96.19 0 0 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 10 58407574 131723044 1 5 56 0 2 0 0 3 0.11 0.01 9 0 0 9 4 6 11 4 7 37.95 51.04 48.79 0 3 2 Whitelist PACA-CA 0.62 0.06 0 0 0.48 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 7 0.06 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 11 17865490 17887914 1 1 56 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 5 5 5 37.95 78.64 17.46 0 1 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 12 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 13 51887974 51905397 1 1 56 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 37.95 45.67 54.33 0 2 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 14 70583738 70840901 1 1 56 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 4 4 37.95 31.94 67.14 0 1 2 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 15 78961594 78983304 1 1 56 0 0 0 1 0 0.39 1 2 NA NA NA NA NA 5 3 3 37.95 72.37 22.69 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 16 50722038 79131851 1 2 56 1 1 0 0 0 0.57 0.06 3 0 0 NA NA NA 4 3 3 37.95 17.01 82.88 0 2 1 Whitelist PACA-CA 0.68 0.19 0 0 0.64 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 17 21444273 63806664 1 3 56 0 0 0 1 2 0.39 0.06 5 NA 0 5 0 4 5 0 4 37.95 47.91 46.72 0 1 2 Whitelist PACA-CA 0.87 0.2 NA 0 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 18 NA NA 0 0 56 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 19 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 20 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 21 20360333 20378882 1 1 56 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 7 5 5 37.95 56.06 21.29 0 1 2 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0269 X 142671798 142724543 1 1 56 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 37.95 99.97 0.03 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0269 PACA 0.62 1.75 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51468 PCSI_0269 male deceased combined chemo+radiation therapy complete response 69 1083 1093 Smoking history not documented 8 no None Included Panc-AdenoCA PACA CA 1 35.62 PACA-CA::PCSI_0274 1 232897961 233030203 2 2 202 0 0 2 0 0 0.11 0.24 1 0 0 NA NA NA 14 6 12 78.96 98.76 1.24 0 4 NA Whitelist PACA-CA 0.54 0.48 0 0 0.48 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 4 0.01 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 2 29842713 222925399 1 5 202 2 0 1 1 1 0.57 0 10 0 0 10 7 8 11 7 7 78.96 99.56 0.34 0 2 4 Whitelist PACA-CA 0.62 0.01 0 0 0.64 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 9 0.02 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 3 67723043 67851627 1 1 202 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 78.96 99.82 0.06 0 2 3 Whitelist PACA-CA 0.62 0 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 4 174934602 188504783 8 8 202 3 3 1 1 0 0.57 0.32 17 0 0 17 8 13 31 8 13 78.96 98.39 1.58 0 1 3 Whitelist PACA-CA 0.68 0.57 0 0 0.64 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 16 0.04 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 False positive; manually removed PACA-CA::PCSI_0274 5 134014280 134519155 1 1 202 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 78.96 99.59 0.28 0 2 3 Whitelist PACA-CA 0.62 0 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 6 130745915 161969048 2 8 202 0 1 1 0 6 0.57 0.1 3 0 0 NA NA NA 12 4 4 78.96 46.68 53.18 0 2 1 Whitelist PACA-CA 12 0.62 0.27 0 0 0.64 0 Linked to high confidence PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA With other complex events 10 0.02 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 7 20585294 155023934 1 11 202 7 0 0 1 3 0 0 16 0 0 16 6 16 18 6 18 78.96 91.15 8.63 1 2 3 Whitelist PACA-CA 0.03 0.02 0 0 0.04 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 19 0.05 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 8 100760932 101100016 1 1 202 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 3 3 78.96 99.99 0 0 3 4 Whitelist PACA-CA 0.62 0.06 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 9 9287728 120930439 1 3 202 3 0 0 0 0 0.03 0.1 5 0.05 0 5 3 5 5 3 3 78.96 0.53 99.33 0 2 0 Whitelist PACA-CA 0.41 0.26 0.05 0 0.33 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 6 0.01 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 10 71078855 102131154 2 2 202 0 0 1 1 0 0.57 1 5 0 0 5 5 5 17 7 17 78.96 71.14 25.47 0 3 1 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 4 0.01 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 11 3962112 134545408 1 6 202 4 0 0 0 2 0.01 0.32 9 0 0 9 9 9 10 10 10 78.96 99.51 0 0 3 4 Whitelist PACA-CA X 0.54 0.57 0 0 0.16 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 10 0.02 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 12 47428310 76942994 6 19 202 2 3 0 1 13 0.34 0 10 0 0 10 7 10 20 7 11 78.96 98.7 1.22 0 4 5 Whitelist PACA-CA 18 0.54 0 0 0 0.59 0 High confidence PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA After polyploidization 25 0.06 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 13 104383097 108100704 2 2 202 1 0 0 1 0 0.57 0.17 4 0 0 4 4 4 5 5 5 78.96 96.82 3.18 15 2 4 Whitelist PACA-CA 0.68 0.39 0 0 0.64 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 4 0.01 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 14 86955184 87558046 15 15 202 2 6 2 5 0 0.33 0 6 0 0 6 0 4 26 5 6 78.96 76.6 22.48 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 30 0.07 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 15 NA NA 0 0 202 0 0 0 0 0 NA 0.13 NA 0 NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.33 0 NA NA 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 16 60663427 61701190 2 2 202 0 0 1 1 0 0.57 0.07 4 0 0 4 4 4 18 5 7 78.96 95.52 4.38 4 2 3 Whitelist PACA-CA 0.68 0.22 0 0 0.64 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 4 0.01 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 17 15559336 54195482 1 6 202 1 1 0 1 3 0.8 0.08 9 0 0 9 5 6 15 5 6 78.96 64.85 30.36 8 2 4 Whitelist PACA-CA 10 0.93 0.22 0 0 0.84 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 9 0.02 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 18 38904263 39580008 4 9 202 1 1 1 1 5 1 0 5 0 0 5 5 5 22 7 7 78.96 99.65 0.32 0 3 1 Whitelist PACA-CA 0.97 0 0 0 1 0 Linked to high confidence PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA Canonical without polyploidization 13 0.03 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 19 15427957 23746379 1 1 202 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 3 3 78.96 99.83 0 0 3 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 20 55589449 56067423 1 1 202 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 78.96 99.02 0 0 4 NA Whitelist PACA-CA 0.62 0.59 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 21 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 22 42788919 43041646 1 1 202 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA 5 3 5 78.96 98.79 1.21 0 3 4 Whitelist PACA-CA 0.62 0.56 NA NA 0.59 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 2 0 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0274 X 49642054 93383109 5 6 202 1 1 1 2 1 0.9 0 19 0 0 19 8 10 27 8 9 78.96 46.01 53.76 0 2 3 Whitelist PACA-CA 0.93 0 0 0 0.92 0 No PACA-CA PCSI_0274 PACA 0.6 3.17 Panc-AdenoCA NA 11 0.03 NA 3 PACA-CA DO51473 PCSI_0274 female deceased combined chemo+radiation therapy complete response 76 4289 4415 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 141.09 PACA-CA::PCSI_0279 1 16455772 189018102 1 2 57 1 0 0 1 0 0.57 0.63 4 0 0 4 3 4 5 3 3 13.8 0.18 99.81 0 2 1 Whitelist PACA-CA 0.68 0.84 0 0 0.64 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 2 85752759 197040656 1 2 57 0 0 1 1 0 0.57 0.63 1 NA 0 NA NA NA NA NA NA 13.8 17.51 82.39 0 2 NA Whitelist PACA-CA 0.68 0.84 NA 0 0.64 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 3 56902000 56923330 1 1 57 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 3 13.8 52.5 44.33 0 1 2 Whitelist PACA-CA 0.62 0.41 NA NA 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 4 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 5 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 6 NA NA 0 0 57 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.5 NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 7 NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 8 34976422 71047466 1 1 57 1 0 0 0 0 0.39 0.77 2 NA 0 NA NA NA 4 4 4 13.8 40.67 59.32 0 1 2 Whitelist PACA-CA 0.62 0.93 NA 0 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 9 71570570 71658453 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 5 13.8 2.97 93.92 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 10 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 11 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 12 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 13 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 14 63910160 63933398 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 13.8 13.48 68.38 0 0 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 15 72224199 72988710 1 1 57 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA 5 5 5 13.8 3.07 96.93 0 2 3 Whitelist PACA-CA 0.62 0.44 NA NA 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 16 27344803 80614712 3 3 57 1 1 1 0 0 0.8 0 7 0 0 7 4 6 7 4 6 13.8 38.9 60.99 0 2 3 Whitelist PACA-CA 0.87 0.02 0 0 0.84 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 6 0.05 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 18 21300644 23140872 1 1 57 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 4 4 13.8 65.15 34.81 2 1 2 Whitelist PACA-CA 0.62 0.87 NA NA 0.59 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 19 31472618 51366174 20 21 57 4 5 6 5 1 0.94 0 35 0 0 35 9 13 36 9 14 13.8 47.01 52.82 0 3 4 Whitelist PACA-CA 1 0 0 0 0.96 1 High confidence PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA With other complex events 41 0.36 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 22 18521810 51136116 8 8 57 2 2 2 2 0 1 0 16 0 0 16 6 8 16 6 8 13.8 99.25 0.42 0 3 1 Whitelist PACA-CA 1 0 0 0 1 1 Low confidence PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA With other complex events 16 0.14 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0279 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0279 PACA 0.6 2.03 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49421 PCSI_0279 female deceased combined chemo+radiation therapy complete response 74 385 385 Smoking history not documented 10 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 12.66 PACA-CA::PCSI_0280 1 NA NA 0 0 96 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 2 83274174 83312168 1 1 96 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 92.32 97.26 0 0 6 NA Whitelist PACA-CA 0.62 0.03 NA NA 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 3 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 4 64561736 95302490 1 4 96 2 2 0 0 0 0.26 0.42 6 0 0 6 3 5 8 3 3 92.32 72.43 25.2 0 7 0 Whitelist PACA-CA 0.62 0.66 0 0 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 5 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 6 NA NA 0 0 96 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.11 NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 7 37330231 81732451 1 4 96 1 0 0 1 2 0.57 0.82 7 0 0 7 4 4 9 5 5 92.32 99.77 0 7 8 6 Whitelist PACA-CA 0.62 0.96 0 0 0.64 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 8 29529007 115994314 3 7 96 2 1 0 0 4 0.3 0.06 10 0 0 10 3 10 13 3 13 92.32 99.99 0 0 4 5 Whitelist PACA-CA 0.77 0.19 0 0 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 9 26362625 26454262 1 1 96 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 0 4 92.32 99.3 0 0 3 5 Whitelist PACA-CA 0.62 0.41 NA NA 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 10 43438137 130728264 1 4 96 1 1 0 1 1 0.8 1 4 0 0 4 3 4 6 3 3 92.32 96.65 0 0 5 3 Whitelist PACA-CA 1 1 0 0 0.84 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 11 489225 45714066 49 50 96 16 15 8 10 1 0.3 0 79 0 0 79 8 14 82 8 11 92.32 96.22 0 0 6 19 Whitelist PACA-CA 0.63 0 0 0 0.59 1 High confidence PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA With other complex events 99 0.52 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 12 78159539 91638467 1 2 96 1 0 1 0 0 0.57 1 3 0 0 NA NA NA 6 3 4 92.32 96.26 0 0 4 6 Whitelist PACA-CA 0.68 1 0 0 0.64 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 13 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 14 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 15 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 16 78641549 78737748 2 2 96 2 0 0 0 0 0.11 0.01 3 0 0 NA NA NA 5 0 0 92.32 95.01 0 0 4 6 Whitelist PACA-CA 0.54 0.06 0 0 0.48 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 17 22071907 25444941 1 2 96 1 0 0 0 1 0.39 0 1 0 NA NA NA NA 10 3 3 92.32 99.98 0 0 8 NA Whitelist PACA-CA 0.68 0.02 0 NA 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 18 26207725 34494333 2 2 96 0 1 1 0 0 0.57 1 3 NA 0 NA NA NA 5 0 3 92.32 99.94 0 0 1 3 Whitelist PACA-CA 0.68 1 NA 0 0.64 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 19 NA NA 0 0 96 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.14 0 NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 21 14546847 14643414 1 1 96 0 0 1 0 0 0.39 0.33 2 NA NA NA NA NA 4 0 0 92.32 77.69 0 0 7 14 Whitelist PACA-CA 0.62 0.58 NA NA 0.59 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0280 X NA NA 0 0 96 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.26 NA NA NA 1 No PACA-CA PCSI_0280 PACA 0.15 4.76 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578449_T_C,CN:3 7 PACA-CA DO51535 PCSI_0280 male deceased combined chemo+radiation therapy complete response 84 764 757 Smoking history not documented 24 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 25.13 PACA-CA::PCSI_0281 1 205267352 233995422 2 2 85 1 0 1 0 0 0.57 0.16 4 0 0 4 4 4 10 8 8 90.07 100 0 0 4 5 Whitelist PACA-CA 0.68 0.37 0 0 0.64 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 2 22707936 202784501 1 2 85 2 0 0 0 0 0.11 0.05 3 NA 0 NA NA NA NA NA NA 90.07 99.9 0 0 4 3 Whitelist PACA-CA 0.54 0.16 NA 0 0.48 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 3 160105034 168660123 4 4 85 1 1 1 1 0 1 0.83 4 0 0 4 4 4 5 5 5 90.07 99.95 0 12 3 4 Whitelist PACA-CA 1 0.97 0 0 1 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 4 134887448 187596304 1 3 85 3 0 0 0 0 0.03 0.38 6 0 0 6 6 6 7 7 7 90.07 99.99 0 0 3 4 Whitelist PACA-CA 0.41 0.63 0 0 0.33 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 5 75405316 169709323 13 13 85 3 4 4 2 0 0.84 0 8 0 0 8 4 5 8 4 5 90.07 99.23 0.63 0 4 3 Whitelist PACA-CA 0.9 0.01 0 0 0.88 1 Low confidence PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA With other complex events 26 0.15 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 6 101916194 102359990 1 1 85 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 90.07 99.85 0 0 3 4 Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 7 106263007 106615315 2 2 85 1 0 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 90.07 99.78 0 0 4 NA Whitelist PACA-CA 0.68 1 0 0 0.64 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 8 84121924 85823858 1 1 85 0 0 0 1 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 90.07 99.99 0 0 3 4 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 9 21905884 118635455 1 3 85 3 0 0 0 0 0.03 0.58 7 0 0 7 5 6 9 5 6 90.07 83.87 15.46 0 2 4 Whitelist PACA-CA 0.41 0.8 0 0 0.33 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 10 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 11 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 12 11582030 90635584 1 4 85 4 0 0 0 0 0.01 1 5 0 0 5 5 5 5 5 5 90.07 99.92 0 0 4 3 Whitelist PACA-CA 0.21 1 0 0 0.16 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 13 51594743 52520882 3 3 85 0 1 1 1 0 0.8 0.77 3 0 0 NA NA NA 4 3 3 90.07 97.22 0 0 6 7 Whitelist PACA-CA 0.87 0.93 0 0 0.84 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 14 67876118 67888885 1 1 85 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 90.07 99.09 0 0 4 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 15 51614221 52548073 1 1 85 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.07 99.87 0 0 3 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 16 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 17 26567461 26616299 1 1 85 0 0 0 1 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 90.07 94.61 0 0 5 NA Whitelist PACA-CA 0.62 0.91 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 18 18569763 26413726 16 16 85 3 0 8 5 0 0.04 0 22 0 0 22 4 6 23 4 6 90.07 95.38 0 45 4 3 Whitelist PACA-CA 0.46 0 0 0 0.38 1 Low confidence PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA With other complex events 32 0.19 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 19 1800568 41939357 1 2 85 2 0 0 0 0 0.11 0.23 5 0.43 0.02 5 3 5 6 3 6 90.07 92.72 0 0 5 4 Whitelist PACA-CA 0.54 0.47 0.43 0.02 0.48 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 20 14748689 14759383 1 1 85 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.07 99.01 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 21 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 22 23142389 50230074 13 13 85 2 4 4 3 0 0.84 0 18 0 0 18 7 17 19 8 8 90.07 97.91 2.09 1 4 3 Whitelist PACA-CA 0.9 0 0 0 0.88 1 High confidence PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA With other complex events 26 0.15 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0281 X NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0281 PACA 0.47 3.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577556_G_C,CN:4 4 PACA-CA DO49422 PCSI_0281 male deceased chemotherapy complete response 74 475 450 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.62 PACA-CA::PCSI_0283 1 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 2 124581595 124594884 1 1 37 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.03 7.23 92.66 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 3 23500529 152237259 1 4 37 1 0 2 1 0 0.57 0.33 1 0.03 0 NA NA NA NA NA NA 28.03 0 99.86 0 2 NA Whitelist PACA-CA 0.68 0.58 0.03 0 0.64 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 8 0.11 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 4 29133479 29159778 1 1 37 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 28.03 0.01 99.97 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 5 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 6 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 7 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 8 1254927 112772708 1 3 37 1 0 1 1 0 0.8 0.44 1 0.01 0 NA NA NA NA NA NA 28.03 0 99.99 0 2 NA Whitelist PACA-CA 0.87 0.68 0.01 0 0.84 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 6 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 9 37242384 37297525 3 3 37 0 1 1 1 0 0.8 0 4 0 0 4 3 4 7 4 4 28.03 33.45 63.44 0 2 1 Whitelist PACA-CA 0.87 0 0 0 0.84 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 6 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 10 23996957 97417258 1 2 37 0 1 1 0 0 0.57 0.24 2 0 0 NA NA NA NA NA NA 28.03 66.32 33.5 0 1 2 Whitelist PACA-CA 0.68 0.48 0 0 0.64 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 4 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 11 NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 12 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 13 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 14 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 15 45512862 45547340 1 1 37 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 28.03 0.03 99.97 0 2 3 Whitelist PACA-CA 0.62 0.52 NA NA 0.59 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 16 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 17 20552601 58460418 1 4 37 0 0 2 2 0 0.26 0 12 0 0 12 0 3 14 0 3 28.03 83.73 10.94 0 1 2 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 8 0.11 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 18 9726985 10623599 1 1 37 0 1 0 0 0 0.39 0.02 2 0 NA NA NA NA 8 3 4 28.03 93.28 2.08 0 3 4 Whitelist PACA-CA 0.62 0.07 0 NA 0.59 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 19 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 20 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 21 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 22 NA NA 0 0 37 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0283 X NA NA 0 0 37 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0283 PACA 0.38 1.74 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:1 1 PACA-CA DO51509 PCSI_0283 male deceased chemotherapy complete response 66 515 515 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 16.94 PACA-CA::PCSI_0284 1 49546378 185924435 1 6 238 3 2 1 0 0 0.34 0.07 15 0 0 15 5 8 17 5 6 60.69 99.63 0.37 0 2 3 Whitelist PACA-CA 0.62 0.21 0 0 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 2 125112849 242849922 30 32 238 6 10 7 7 2 0.75 0 46 0 0 46 18 45 53 18 18 60.69 75 22.32 4 3 2 Whitelist PACA-CA 0.74 0 0 0 0.83 1 High confidence PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA With other complex events 62 0.13 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 3 54105071 175166146 1 4 238 3 1 0 0 0 0.11 0 8 0 0 8 4 8 9 5 5 60.69 99.57 0.3 0 3 2 Whitelist PACA-CA 0.54 0 0 0 0.48 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 4 327800 189188746 3 4 238 2 1 0 0 1 0.3 0.09 13 0 0 13 3 5 16 3 5 60.69 97.5 2.31 0 3 2 Whitelist PACA-CA 0.68 0.25 0 0 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 7 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 5 21089197 132292433 1 7 238 1 3 0 1 2 0.28 0.35 7 0 0 7 4 7 8 4 8 60.69 97.32 0 0 4 3 Whitelist PACA-CA 1 0.62 0.6 0 0 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 6 51579695 64949354 3 5 238 1 1 0 1 2 0.8 0.89 12 0 0 12 4 10 22 5 5 60.69 7.62 92.24 0 5 6 Whitelist PACA-CA 0.93 1 0 0 0.84 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 7 NA NA 0 0 238 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 8 25945162 132424548 40 42 238 14 8 10 8 2 0.49 0 68 0 0 68 4 7 69 4 7 60.69 38.53 58.05 19 2 8 Whitelist PACA-CA 0.62 0 0 0 0.64 1 Low confidence PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA With other complex events 82 0.17 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 9 NA NA 0 0 238 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 10 53550807 84060060 1 4 238 2 2 0 0 0 0.26 0.06 4 0 0 4 4 4 6 5 5 60.69 99.53 0.3 0 2 3 Whitelist PACA-CA 0.62 0.19 0 0 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 11 79463546 94210164 1 2 238 1 1 0 0 0 0.57 0.28 2 0 0 NA NA NA 6 3 3 60.69 76.92 22.65 0 2 4 Whitelist PACA-CA 0.68 0.52 0 0 0.64 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 12 7368969 29984489 2 4 238 1 0 0 1 2 0.57 0 18 0 0 18 4 5 42 4 5 60.69 59.17 37.08 1 5 6 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 13 NA NA 0 0 238 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 14 38481484 38711935 1 2 238 1 1 0 0 0 0.57 0.04 2 NA 0 NA NA NA NA NA NA 60.69 81.29 0 0 4 6 Whitelist PACA-CA 0.68 0.13 NA 0 0.64 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 15 NA NA 0 0 238 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.21 NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 16 78217399 78973185 1 4 238 4 0 0 0 0 0.01 0.84 8 0 0 8 8 8 9 9 9 60.69 99.67 0 0 3 4 Whitelist PACA-CA 0.21 0.98 0 0 0.16 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 17 40555976 46477708 1 1 238 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 8 3 4 60.69 86.01 13.98 0 5 6 Whitelist PACA-CA 0.62 1 0 NA 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 2 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 18 NA NA 0 0 238 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 19 23639952 52645682 10 10 238 5 3 1 1 0 0.22 0 14 0 0 14 3 11 16 3 3 60.69 84.88 7.8 1 3 2 Whitelist PACA-CA 0.62 0.02 0 0 0.59 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 20 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 20 48853377 57995207 6 7 238 2 1 1 2 1 0.88 0 13 0 0 13 7 13 23 9 9 60.69 16.31 82.62 0 3 4 Whitelist PACA-CA 0.96 0 0 0 0.91 1 High confidence PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA With other complex events 13 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 21 26549827 42411835 2 7 238 1 2 0 1 3 0.57 0 16 0 0 16 6 16 21 6 6 60.69 35.52 39.79 0 3 2 Whitelist PACA-CA 6 0.96 0 0 0 0.64 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 11 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 22 31682849 47183359 4 7 238 0 0 3 1 3 0.11 0 11 0 0 11 3 5 15 3 5 60.69 45.99 30.23 0 3 2 Whitelist PACA-CA 0.77 0 0 0 0.48 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 11 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0284 X NA NA 0 0 238 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.01 NA NA NA 1 No PACA-CA PCSI_0284 PACA 0.56 3.12 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577545_C_T;17_7577548_G_C,CN:2 2 PACA-CA DO51541 PCSI_0284 male deceased combined chemo+radiation therapy complete response 81 325 326 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.69 PACA-CA::PCSI_0285 1 154778248 155314516 2 2 446 0 2 0 0 0 0.11 0.48 3 0 0 NA NA NA 56 7 11 75.07 99.94 0.06 0 6 11 Whitelist PACA-CA 0.54 0.73 0 0 0.48 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 4 0 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 2 219751944 220115981 6 6 446 1 0 3 2 0 0.34 0.61 3 0 0 NA NA NA 32 5 6 75.07 99.6 0.29 0 3 5 Whitelist PACA-CA 0.62 0.82 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 12 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 3 184007046 184413933 9 9 446 1 1 5 2 0 0.19 0.85 6 0 0 6 0 3 21 4 7 75.07 99.42 0.46 0 5 8 Whitelist PACA-CA 0.62 0.99 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 18 0.02 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 4 117110284 186019798 2 6 446 1 0 1 2 2 0.57 0 8 0 0 8 5 5 23 5 7 75.07 49.62 50.36 0 4 6 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 Linked to low confidence PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA Before polyploidization 10 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 5 87223386 176840595 4 6 446 1 1 1 1 2 1 0.92 17 0 0 17 4 11 32 8 8 75.07 73.15 24.17 0 3 2 Whitelist PACA-CA 0.68 1 0 0 1 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 10 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 6 30230905 162590487 1 10 446 1 5 0 0 4 0.01 0 18 0 0 18 4 6 20 4 6 75.07 99.61 0.24 0 3 4 Whitelist PACA-CA 0.47 0 0 0 0.19 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 16 0.02 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 7 1147158 139687336 1 11 446 2 3 0 0 6 0.14 0.02 14 0 0 14 3 7 19 4 7 75.07 99.09 0.68 0 3 6 Whitelist PACA-CA 0.54 0.08 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 16 0.02 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 8 141502958 141679406 3 3 446 1 2 0 0 0 0.3 0.01 3 0 0 NA NA NA 10 5 7 75.07 99.65 0.07 0 4 5 Whitelist PACA-CA 0.62 0.04 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 6 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 9 4897139 136004647 1 15 446 2 7 1 1 4 0.03 0.81 19 0 0 19 5 9 20 5 7 75.07 99.33 0 0 3 5 Whitelist PACA-CA 0.54 0.95 0 0 0.33 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 26 0.03 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 10 NA NA 0 0 446 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 11 1605498 79373234 1 17 446 0 7 0 1 9 0 0.43 16 0 0 16 3 7 20 3 4 75.07 80.35 19.23 0 3 5 Whitelist PACA-CA 0.25 0.68 0 0 0.04 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 25 0.03 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 12 239077 58662706 2 3 446 1 0 0 1 1 0.57 0.82 10 0 0 10 4 5 17 4 4 75.07 96.09 0 0 3 4 Whitelist PACA-CA 0.62 0.96 0 0 0.64 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 5 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 13 27999141 55276600 1 5 446 1 2 0 0 2 0.3 0.01 6 0 0 6 3 4 9 3 5 75.07 100 0 0 4 3 Whitelist PACA-CA 0.62 0.06 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 8 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 14 25859197 28409015 9 9 446 0 6 1 2 0 0.03 0.28 7 0 0 7 3 3 33 4 8 75.07 81.29 0 0 8 12 Whitelist PACA-CA 0.41 0.52 0 0 0.33 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 18 0.02 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 15 26969197 93751439 1 3 446 0 3 0 0 0 0.03 0 7 0 0 7 5 5 10 5 5 75.07 57.24 37.87 0 4 5 Whitelist PACA-CA 0.41 0.02 0 0 0.33 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 6 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 16 2127414 79034690 1 6 446 2 0 0 1 3 0.3 0.18 7 0 0 7 3 5 7 3 5 75.07 97.49 2.41 0 2 3 Whitelist PACA-CA 0.68 0.4 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 9 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 17 57949419 61791871 63 70 446 21 14 13 15 7 0.48 0 50 0 0 50 4 8 75 4 8 75.07 56.68 38.87 2 10 4 Whitelist PACA-CA 4 0.68 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA With other complex events 133 0.15 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 18 54988251 65865423 1 2 446 0 2 0 0 0 0.11 0.04 3 0 0 NA NA NA 9 3 3 75.07 26.66 73.31 0 2 4 Whitelist PACA-CA 0.54 0.13 0 0 0.48 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 4 0 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 19 27751856 34183653 52 54 446 15 7 13 17 2 0.23 0 44 0 0 44 3 4 67 5 8 75.07 52.78 39.94 6 15 13 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 106 0.12 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 20 37764749 62358438 5 7 446 1 2 1 1 2 0.9 0 9 0 0 9 3 5 35 9 13 75.07 92.21 0.56 0 5 3 Whitelist PACA-CA 0.96 0 0 0 0.92 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 12 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 21 45721355 45748155 2 2 446 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 12 5 6 75.07 77.35 0 0 6 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 4 0 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 22 17756076 46462070 1 3 446 0 3 0 0 0 0.03 0.51 8 0 0 8 3 6 8 3 6 75.07 24.97 63.92 0 2 1 Whitelist PACA-CA 0.41 0.75 0 0 0.33 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 6 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0285 X 32390902 70258209 1 4 446 0 1 1 1 1 0.8 0 6 0 0 6 5 6 11 5 5 75.07 21.19 78.81 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.84 0 No PACA-CA PCSI_0285 PACA 0.56 3.15 Panc-AdenoCA NA 7 0.01 NA 3 PACA-CA DO51494 PCSI_0285 male deceased no treatment 59 631 631 Smoking history not documented 57 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 20.76 PACA-CA::PCSI_0287 1 1580756 35953937 3 3 152 1 0 1 1 0 0.8 0.17 1 0 0 NA NA NA 7 7 7 5.74 0.82 99.18 2 2 NA Whitelist PACA-CA 0.87 0.39 0 0 0.84 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 2 71708971 242161284 1 9 152 8 0 0 1 0 0 0.38 9 0 0 9 9 9 9 9 9 5.74 1.16 98.74 0 2 1 Whitelist PACA-CA 0.02 0.63 0 0 0.02 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 18 0.06 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 3 41316114 122547873 1 4 152 4 0 0 0 0 0.01 0.04 2 0 0 NA NA NA NA NA NA 5.74 5.3 94.67 0 1 2 Whitelist PACA-CA 0.21 0.13 0 0 0.16 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 8 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 4 2614401 67070152 1 3 152 3 0 0 0 0 0.03 0.05 6 0.34 0 6 6 6 7 7 7 5.74 1.23 98.75 0 1 2 Whitelist PACA-CA 0.41 0.16 0.34 0 0.33 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 5 42948862 161982242 1 5 152 5 0 0 0 0 0 0.18 2 0 0 NA NA NA NA NA NA 5.74 0.02 99.86 0 1 2 Whitelist PACA-CA 0.1 0.39 0 0 0.07 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 10 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 6 26445451 161795623 41 41 152 12 7 12 10 0 0.65 0 47 0 0 47 47 47 51 51 51 5.74 38.66 58.31 0 2 1 Whitelist PACA-CA 0.76 0 0 0 0.73 1 High confidence PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA Canonical without polyploidization 82 0.27 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 7 11508378 110475211 1 4 152 4 0 0 0 0 0.01 0.15 5 0 0 5 5 5 5 5 5 5.74 0.38 99.4 0 2 1 Whitelist PACA-CA 0.21 0.35 0 0 0.16 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 8 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 8 6539146 42832373 1 3 152 2 0 1 0 0 0.3 0.09 1 0.06 0 NA NA NA NA NA NA 5.74 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.26 0.06 0 0.59 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 9 12263449 31719162 7 7 152 2 1 2 2 0 0.93 0.2 7 0 0 7 7 7 7 7 7 5.74 3.53 96.32 0 2 1 Whitelist PACA-CA 0.96 0.43 0 0 0.95 1 High confidence PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA Canonical without polyploidization 14 0.05 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 10 324176 99514412 1 5 152 5 0 0 0 0 0 0.56 12 0 0 12 12 12 13 13 13 5.74 15.41 84.42 0 1 2 Whitelist PACA-CA 0.1 0.79 0 0 0.07 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 10 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 11 31044158 45136475 7 7 152 2 1 2 2 0 0.93 0 5 0 0 5 5 5 15 15 15 5.74 6.7 89.22 0 2 1 Whitelist PACA-CA 0.96 0 0 0 0.95 1 Low confidence PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA Canonical without polyploidization 14 0.05 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 12 17914468 68317929 1 5 152 5 0 0 0 0 0 0.56 5 0 0 5 5 5 5 5 5 5.74 1.16 98.76 0 2 1 Whitelist PACA-CA 0.1 0.79 0 0 0.07 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 10 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 13 22606181 81652127 1 4 152 4 0 0 0 0 0.01 0.82 5 0 0 5 5 5 5 5 5 5.74 2.5 97.5 0 2 1 Whitelist PACA-CA 0.21 0.96 0 0 0.16 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 8 0.03 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 14 50505430 77353362 1 3 152 3 0 0 0 0 0.03 0.64 2 0 0 NA NA NA NA NA NA 5.74 25.01 74.08 0 1 2 Whitelist PACA-CA 0.41 0.85 0 0 0.33 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 15 24936403 25526591 2 2 152 2 0 0 0 0 0.11 0.21 1 0 0 NA NA NA 9 9 9 5.74 21.78 78.12 0 2 NA Whitelist PACA-CA 0.54 0.43 0 0 0.48 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 16 3968811 83867202 1 3 152 1 2 0 0 0 0.3 0.8 2 0.37 0.01 NA NA NA 4 3 3 5.74 3.26 96.63 0 2 3 Whitelist PACA-CA 0.62 0.95 0.37 0.01 0.59 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 17 56157807 57429288 2 2 152 2 0 0 0 0 0.11 0.61 4 0 0 4 3 4 7 4 4 5.74 2.4 97.59 0 1 0 Whitelist PACA-CA 0.54 0.83 0 0 0.48 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 18 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 19 2455897 19291543 2 2 152 0 0 1 1 0 0.57 0.55 1 0.01 0 NA NA NA NA NA NA 5.74 0 99.83 0 2 NA Whitelist PACA-CA 0.68 0.78 0.01 0 0.64 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 20 3964061 5443585 1 1 152 0 0 1 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 5.74 0 99.03 0 2 NA Whitelist PACA-CA 0.62 0.64 NA NA 0.59 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 21 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 22 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0287 X 67418525 68412578 1 1 152 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 5.74 0.64 99.13 0 1 2 Whitelist PACA-CA 0.62 0.04 NA NA 0.59 1 No PACA-CA PCSI_0287 PACA 0.94 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51500 PCSI_0287 female alive C25 no treatment 69 482 482 Current smoker (includes daily smokers non-daily/occasional smokers) 60 yes Not Documented Included Panc-AdenoCA PACA CA 1 15.86 PACA-CA::PCSI_0290 1 245457551 245480636 1 1 137 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 9 4 9 69.83 49.74 47.06 0 3 4 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 2 105615486 160928082 1 2 137 1 0 0 1 0 0.57 0.02 1 0 0 NA NA NA 8 3 3 69.83 97.03 0 0 4 NA Whitelist PACA-CA 0.68 0.08 0 0 0.64 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 3 42100268 174838365 1 4 137 1 1 0 0 2 0.57 0.06 7 0 0 7 3 5 7 3 3 69.83 81.01 15.91 0 3 2 Whitelist PACA-CA 18 1 0.2 0 0 0.64 0 Linked to low confidence PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA With other complex events 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 4 48831112 128002459 1 5 137 0 2 0 1 2 0.3 1 10 0 0 10 8 10 12 8 8 69.83 30.85 66.69 0 3 2 Whitelist PACA-CA 0.68 1 0 0 0.59 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 5 32705324 179153809 1 4 137 3 1 0 0 0 0.11 0.29 6 0 0 6 6 6 7 7 7 69.83 99.86 0 1 3 4 Whitelist PACA-CA 0.54 0.53 0 0 0.48 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 6 NA NA 0 0 137 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 7 56573528 122514418 1 3 137 1 1 0 1 0 0.8 0.13 1 0 0 NA NA NA NA NA NA 69.83 99.78 0 0 4 NA Whitelist PACA-CA 0.87 0.32 0 0 0.84 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 8 42316395 146260778 6 8 137 2 2 2 0 2 0.57 0 14 0 0 14 4 9 17 4 9 69.83 96.51 0 5 8 6 Whitelist PACA-CA 11 0.62 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA With other complex events 14 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 9 17806784 34254680 4 7 137 2 1 1 0 3 0.57 0.26 12 0 0 12 5 8 15 5 8 69.83 28.1 68.79 1 2 1 Whitelist PACA-CA 0.62 0.51 0 0 0.64 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 10 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 11 55509544 78804416 1 5 137 4 0 0 0 1 0.01 0.54 11 0 0 11 5 7 12 6 7 69.83 49.08 47.45 1 3 2 Whitelist PACA-CA 0.45 0.77 0 0 0.16 0 Linked to low confidence PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA With other complex events 9 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 12 28932514 30029783 9 10 137 0 3 5 1 1 0.09 0 7 0 0 7 3 4 16 3 3 69.83 99.92 0 1 1 6 Whitelist PACA-CA 0.47 0 0 0 0.48 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 19 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 13 98842559 102640220 1 2 137 2 0 0 0 0 0.11 0.34 2 NA 0 NA NA NA NA NA NA 69.83 99.91 0.09 0 2 3 Whitelist PACA-CA 0.54 0.59 NA 0 0.48 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 14 97708039 97726708 1 1 137 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 4 69.83 84.09 0 0 3 5 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 15 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 16 50891911 78805701 1 4 137 3 1 0 0 0 0.11 0.79 3 0 0 NA NA NA NA NA NA 69.83 99.89 0 0 4 3 Whitelist PACA-CA 0.54 0.94 0 0 0.48 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 17 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 18 1700778 25341902 32 39 137 9 8 8 7 7 0.97 0 56 0 0 56 5 10 67 6 10 69.83 72.92 22.4 8 8 1 Whitelist PACA-CA 0.95 0 0 0 0.98 0 Low confidence PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA With other complex events 71 0.26 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 19 19920734 41137149 1 7 137 4 0 1 2 0 0.17 0 11 0 0 11 4 4 13 4 4 69.83 69.08 30.48 1 3 2 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 20 15127559 15158610 1 1 137 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 11 3 6 69.83 57.43 35.25 0 2 NA Whitelist PACA-CA 0.62 0.05 0 NA 0.59 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 21 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 22 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0290 X 5979900 137644620 1 2 137 1 1 0 0 0 0.57 0.05 1 NA 0.04 NA NA NA NA NA NA 69.83 100 0 0 1 NA Whitelist PACA-CA 0.68 0.16 NA 0.04 0.64 0 No PACA-CA PCSI_0290 PACA 0.72 3.1 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 4 PACA-CA DO51529 PCSI_0290 male deceased C25 combined chemo+radiation therapy disease progression 87 276 259 Current reformed smoker for > 15 years 30 no None Included Panc-AdenoCA PACA CA 1 9.08 PACA-CA::PCSI_0292 1 92765615 222494893 3 4 177 1 1 0 1 1 0.8 0.57 13 0 0 13 3 6 18 4 7 76.56 78.22 21.49 0 4 5 Whitelist PACA-CA 0.68 0.8 0 0 0.84 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 7 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 2 5538475 129812532 2 5 177 0 0 2 2 1 0.26 0.89 11 0 0 11 5 11 17 5 13 76.56 99.25 0.66 1 4 3 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 9 0.03 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 3 42279647 178795780 1 4 177 1 3 0 0 0 0.11 0.77 8 0 0 8 4 7 11 4 5 76.56 77.78 22.08 0 4 6 Whitelist PACA-CA 0.54 0.93 0 0 0.48 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 8 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 4 24577133 24610233 1 1 177 1 0 0 0 0 0.39 0.55 2 0 NA NA NA NA 11 4 6 76.56 99.8 0 0 3 5 Whitelist PACA-CA 0.62 0.77 0 NA 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 2 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 5 57359478 178740067 1 7 177 3 0 0 0 4 0.03 1 11 0 0 11 5 5 12 5 5 76.56 91.85 8.01 0 4 3 Whitelist PACA-CA 0.62 1 0 0 0.33 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 10 0.03 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 6 20098379 169847267 1 3 177 1 2 0 0 0 0.3 0.75 6 0 0 6 5 6 9 5 5 76.56 38.28 61.59 0 4 2 Whitelist PACA-CA 0.62 0.92 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 6 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 7 79421679 130723871 1 3 177 1 2 0 0 0 0.3 0.13 6 0 0 6 3 6 17 6 6 76.56 94.86 4.92 0 4 6 Whitelist PACA-CA 0.62 0.32 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 6 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 8 131691974 131745782 2 2 177 0 1 1 0 0 0.57 0 1 0 0 NA NA NA 15 6 8 76.56 99.99 0 0 8 NA Whitelist PACA-CA 0.68 0.02 0 0 0.64 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 4 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 9 13445007 118776800 1 2 177 2 0 0 0 0 0.11 0.56 8 0 0 8 3 8 9 3 9 76.56 87.05 12.25 0 2 4 Whitelist PACA-CA 0.54 0.79 0 0 0.48 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 4 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 10 67516078 129548414 3 3 177 2 1 0 0 0 0.3 0.03 10 0 0 10 4 4 15 4 5 76.56 85.05 14.88 0 5 4 Whitelist PACA-CA 0.62 0.11 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 6 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 11 79196817 126596174 5 6 177 3 1 1 0 1 0.28 0.01 9 0 0 9 4 5 16 5 6 76.56 90.48 8.96 0 2 4 Whitelist PACA-CA 0.68 0.03 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 11 0.03 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 12 12453185 98786326 1 4 177 3 0 0 0 1 0.03 0.48 5 0 0 5 3 5 13 7 11 76.56 96.26 0 0 5 3 Whitelist PACA-CA 0.54 0.72 0 0 0.33 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 7 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 13 82051202 84828871 1 1 177 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 6 3 5 76.56 40.28 59.72 0 0 2 Whitelist PACA-CA 0.62 0.97 0 NA 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 2 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 14 NA NA 0 0 177 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 0 0 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 15 60657911 64309685 1 2 177 2 0 0 0 0 0.11 0.07 1 0 0 NA NA NA NA NA NA 76.56 99.84 0 0 4 NA Whitelist PACA-CA 0.54 0.2 0 0 0.48 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 4 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 16 19370248 19420822 1 1 177 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 76.56 99.9 0 0 4 NA Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 2 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 17 27595156 57919262 1 2 177 2 0 0 0 0 0.11 0.35 1 0 0 NA NA NA 5 4 4 76.56 79.45 20.52 0 4 NA Whitelist PACA-CA 0.54 0.6 0 0 0.48 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 4 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 18 31060681 64638582 3 3 177 2 1 0 0 0 0.3 0.25 6 0 0 6 4 5 7 4 5 76.56 70.85 23.32 0 2 4 Whitelist PACA-CA 0.62 0.49 0 0 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 6 0.02 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 19 36518866 36543234 2 2 177 0 0 1 1 0 0.57 0.09 1 0 0 NA NA NA 5 5 5 76.56 99.83 0 0 4 NA Whitelist PACA-CA 0.68 0.25 0 0 0.64 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 4 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 20 NA NA 0 0 177 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist PACA-CA NA 0.53 0 NA NA 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 0 0 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 21 NA NA 0 0 177 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 0 0 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 22 17017963 21303022 1 1 177 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 76.56 100 0 0 5 6 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 2 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0292 X 70228974 70239178 1 1 177 1 0 0 0 0 0.39 0.61 2 0 NA NA NA NA 7 5 5 76.56 19.72 80.28 0 1 2 Whitelist PACA-CA 0.62 0.82 0 NA 0.59 0 No PACA-CA PCSI_0292 PACA 0.57 3.78 Panc-AdenoCA NA 2 0.01 NA 5 PACA-CA DO51474 PCSI_0292 male alive C25.1 chemotherapy complete response 63 1890 1890 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 62.17 PACA-CA::PCSI_0294 1 83471911 83605845 2 2 42 0 0 1 1 0 0.57 0.57 4 0 0 4 4 4 6 5 5 83.33 96.96 0.03 0 2 3 Whitelist PACA-CA 0.68 0.79 0 0 0.64 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 4 0.05 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 2 33262244 33834576 2 2 42 0 0 1 1 0 0.57 0.78 4 0 0 4 4 4 9 5 9 83.33 99.85 0.05 0 3 4 Whitelist PACA-CA 0.68 0.93 0 0 0.64 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 4 0.05 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 3 138347244 138462426 1 1 42 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 83.33 99.95 0 0 4 NA Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 4 113463422 114543537 1 1 42 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 83.33 99.42 0.57 0 2 3 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 5 85136908 85232610 1 1 42 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA NA NA NA 83.33 99.81 0.05 0 2 3 Whitelist PACA-CA 0.62 0.91 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 6 1404274 32696885 3 6 42 1 0 1 1 3 0.8 0 1 0.02 0 NA NA NA NA NA NA 83.33 99.86 0 0 3 NA Whitelist PACA-CA 1 0.93 0 0.02 0 0.84 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 9 0.11 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 7 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 8 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 9 9122316 22405692 1 2 42 2 0 0 0 0 0.11 0.68 3 NA 0 NA NA NA 5 3 5 83.33 1.53 95.9 0 2 0 Whitelist PACA-CA 0.54 0.88 NA 0 0.48 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 4 0.05 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 10 51020462 122393130 1 1 42 1 0 0 0 0 0.39 1 4 NA NA 4 3 4 5 3 3 83.33 47.59 52.24 0 4 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 11 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 12 3169295 41116459 1 2 42 1 1 0 0 0 0.57 0.13 3 0 0 NA NA NA NA NA NA 83.33 96.26 0 0 3 5 Whitelist PACA-CA 0.68 0.32 0 0 0.64 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 4 0.05 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 13 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 14 25447874 106341698 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 83.33 99.09 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 15 56275947 96277523 1 2 42 0 1 0 0 1 0.39 0.11 3 NA NA NA NA NA 6 6 6 83.33 95.09 0 0 3 4 Whitelist PACA-CA 0.68 0.29 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 3 0.04 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 16 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 17 18478111 20277180 1 2 42 0 1 0 0 1 0.39 0.32 3 NA NA NA NA NA NA NA NA 83.33 76.66 23.34 0 2 4 Whitelist PACA-CA 0.68 0.57 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 3 0.04 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 18 18923855 71465472 1 6 42 2 0 1 0 3 0.3 0 8 0 0 8 3 4 8 3 4 83.33 95.09 0.27 4 3 1 Whitelist PACA-CA 0.54 0.01 0 0 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 9 0.11 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 19 9326971 9341761 1 1 42 0 0 1 0 0 0.39 0.57 1 NA NA NA NA NA NA NA NA 83.33 99.83 0 0 4 NA Whitelist PACA-CA 0.62 0.79 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 20 20544372 21657011 1 1 42 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 83.33 98.93 0 0 3 4 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 21 NA NA 0 0 42 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.65 NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 22 32835026 33848152 1 1 42 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 83.33 100 0 0 3 4 Whitelist PACA-CA 0.62 0.64 NA NA 0.59 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0294 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0294 PACA 0.72 3.44 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7576917_-_T,CN:2 3 PACA-CA DO51522 PCSI_0294 female deceased C25.0 chemotherapy unknown 50 201 201 Current reformed smoker, duration not specified 3 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.61 PACA-CA::PCSI_0297 1 99399397 118242928 1 8 181 1 0 0 0 7 0.39 0.04 7 0 0 7 7 7 13 13 13 22.97 17.3 82.7 11 2 1 Whitelist PACA-CA 6_9 0.62 0.13 0 0 0.59 1 Linked to high confidence PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA Canonical without polyploidization 9 0.02 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 2 NA NA 0 0 181 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 3 60840365 61193377 2 2 181 1 0 1 0 0 0.57 0.02 2 0 0 NA NA NA 5 5 5 22.97 0.2 99.62 0 1 2 Whitelist PACA-CA 0.68 0.08 0 0 0.64 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 4 0.01 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 4 64170731 131694848 1 3 181 3 0 0 0 0 0.03 0 6 0 0 6 6 6 7 7 7 22.97 0.18 99.72 0 1 2 Whitelist PACA-CA 0.41 0.02 0 0 0.33 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 6 0.02 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 5 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 6 3725048 101996716 1 22 181 1 0 0 1 20 0.57 0 8 0 0 8 6 8 8 6 6 22.97 82.48 17.28 0 1 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA Canonical without polyploidization 24 0.07 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 7 9103797 132962944 1 2 181 2 0 0 0 0 0.11 0.02 4 0 0.04 4 4 4 5 5 5 22.97 3.82 95.95 0 1 2 Whitelist PACA-CA 0.54 0.08 0 0.04 0.48 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 4 0.01 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 8 47538307 48634490 3 3 181 2 1 0 0 0 0.3 0.04 1 0 0 NA NA NA NA NA NA 22.97 0 99.99 1 2 NA Whitelist PACA-CA 0.62 0.14 0 0 0.59 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 6 0.02 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 9 3612495 91279620 7 29 181 3 2 1 1 22 0.67 0 20 0 0 20 20 20 23 23 23 22.97 10.51 88.79 1 1 2 Whitelist PACA-CA 6 0.68 0 0 0 0.74 1 High confidence PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA Canonical without polyploidization 36 0.1 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 10 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 11 49424937 89029834 1 1 181 0 0 1 0 0 0.39 0 1 0 NA NA NA NA 9 9 9 22.97 0.69 98.75 0 2 NA Whitelist PACA-CA 0.62 0.01 0 NA 0.59 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 2 0.01 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 12 49890146 51896557 8 16 181 0 6 1 1 8 0.01 0 12 0 0 12 12 12 25 25 25 22.97 2.9 97.01 0 1 2 Whitelist PACA-CA 0.62 0 0 0 0.21 1 High confidence PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA Canonical without polyploidization 24 0.07 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 13 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 14 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 15 45286108 98704354 4 4 181 1 0 2 1 0 0.57 0.65 11 0 0 11 5 9 11 5 5 22.97 80.25 19.59 4 2 1 Whitelist PACA-CA 0.68 0.86 0 0 0.64 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 8 0.02 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 16 78188412 78747289 1 2 181 1 1 0 0 0 0.57 0.64 3 0 0 NA NA NA NA NA NA 22.97 0.04 99.87 0 2 1 Whitelist PACA-CA 0.68 0.85 0 0 0.64 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 4 0.01 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 17 16438476 80055892 42 43 181 11 12 10 9 1 0.92 0 73 0 0 73 8 10 75 8 10 22.97 76.82 18.73 0 2 3 Whitelist PACA-CA 0.96 0 0 0 0.94 1 High confidence PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA With other complex events 85 0.23 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 18 18639922 21640587 2 6 181 1 0 2 1 2 0.57 0 9 0 0 9 0 4 13 5 5 22.97 73.6 21.76 5 2 3 Whitelist PACA-CA 1 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 10 0.03 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 19 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 20 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 21 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 22 NA NA 0 0 181 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 0 0 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0297 X 93301959 122575977 1 5 181 3 0 0 2 0 0.14 0.39 9 0 0 9 9 9 12 10 11 22.97 99.77 0 0 4 3 Whitelist PACA-CA 0.62 0.64 0 0 0.59 1 No PACA-CA PCSI_0297 PACA 0.85 1.89 Panc-AdenoCA NA 10 0.03 stopgain,17_7573991_A_C,CN:1 2 PACA-CA DO51527 PCSI_0297 female deceased C25.7 no treatment 86 349 349 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.48 PACA-CA::PCSI_0300 1 174613187 216459394 1 3 208 3 0 0 0 0 0.03 0 6 0 0 6 3 4 11 4 8 71.84 48.24 48.3 0 4 1 Whitelist PACA-CA 0.41 0 0 0 0.33 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 2 3698272 4609870 1 1 208 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 71.84 99.9 0 0 1 3 Whitelist PACA-CA 0.62 0 NA NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 3 60241084 60617991 2 2 208 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA 5 5 5 71.84 0.53 99.35 0 1 NA Whitelist PACA-CA 0.54 0.06 0 0 0.48 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 4 3278351 163404869 1 3 208 3 0 0 0 0 0.03 0 7 0 0 7 4 4 8 4 5 71.84 93.94 6.05 0 3 1 Whitelist PACA-CA 0.41 0.02 0 0 0.33 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 5 11674606 157769071 1 2 208 2 0 0 0 0 0.11 0 4 NA 0.05 4 4 4 5 5 5 71.84 99.32 0.54 3 2 3 Whitelist PACA-CA 0.54 0 NA 0.05 0.48 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 6 91082025 91377090 1 1 208 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 71.84 82.34 17.42 0 1 3 Whitelist PACA-CA 0.62 0.02 NA NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 7 139885932 159081404 35 36 208 9 9 9 8 1 0.99 0 46 0 0 46 6 13 50 6 13 71.84 88.92 11.01 0 2 3 Whitelist PACA-CA 0.99 0 0 0 1 0 Low confidence PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA With other complex events 71 0.17 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 8 84417632 113033544 1 1 208 1 0 0 0 0 0.39 0.08 2 0 NA NA NA NA 5 3 5 71.84 80.34 19.55 0 2 3 Whitelist PACA-CA 0.62 0.23 0 NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 9 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 10 49490322 110030943 1 3 208 3 0 0 0 0 0.03 0.03 4 0 0 4 4 4 5 5 5 71.84 99.82 0 0 1 3 Whitelist PACA-CA 0.41 0.11 0 0 0.33 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 11 68371091 133782987 1 2 208 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 71.84 99.57 0 0 1 3 Whitelist PACA-CA 0.54 0.04 NA 0 0.48 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 12 24383751 68089214 76 78 208 17 21 22 16 2 0.71 0 72 0 0 72 6 7 77 6 7 71.84 43.55 52.71 28 5 4 Whitelist PACA-CA 0.7 0 0 0 0.79 0 Low confidence PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA With other complex events 154 0.37 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 13 NA NA 0 0 208 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.05 NA NA NA 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 14 57182615 81049581 1 2 208 2 0 0 0 0 0.11 0.23 3 0 0 NA NA NA NA NA NA 71.84 98.46 0.62 0 3 2 Whitelist PACA-CA 0.54 0.46 0 0 0.48 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 15 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 16 32844828 79180078 1 4 208 4 0 0 0 0 0.01 0.67 9 0 0 9 7 9 9 7 7 71.84 99.72 0.19 0 3 2 Whitelist PACA-CA 0.21 0.87 0 0 0.16 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 17 18097729 20450320 2 5 208 1 0 0 1 3 0.57 0.03 10 0 0 10 0 3 18 3 4 71.84 72.15 22.59 0 4 7 Whitelist PACA-CA 19 0.93 0.11 0 0 0.64 0 Linked to high confidence PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA With other complex events 7 0.02 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 18 913266 22127488 2 2 208 1 0 1 0 0 0.57 0.67 3 0.02 0.59 NA NA NA 5 4 4 71.84 98.68 1.3 0 2 4 Whitelist PACA-CA 0.68 0.87 0.02 0.59 0.64 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 19 29270995 48823894 5 11 208 2 0 2 1 6 0.53 0 21 0 0 21 7 7 28 7 7 71.84 64.97 27.56 1 2 3 Whitelist PACA-CA 0.87 0 0 0 0.64 0 High confidence PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA With other complex events 16 0.04 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 20 14671187 14732034 1 1 208 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 0 3 71.84 98.48 0.53 0 1 3 Whitelist PACA-CA 0.62 0.34 NA NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 21 29082315 29581639 1 1 208 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 71.84 1.04 69.17 0 1 2 Whitelist PACA-CA 0.62 0.91 NA NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 22 46586450 47220827 1 1 208 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 71.84 8.25 91.75 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 PACA-CA::PCSI_0300 X 116539582 151569032 3 8 208 2 0 2 2 2 0.57 0.15 15 0 0 15 9 15 21 9 21 71.84 94.19 1.81 0 3 2 Whitelist PACA-CA 0.87 0.36 0 0 0.64 0 No PACA-CA PCSI_0300 PACA 0.58 2.82 Panc-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578402_C_G,CN:2 2 PACA-CA DO51472 PCSI_0300 female deceased C25.0 chemotherapy complete response 65 590 590 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 19.41 False positive; manually removed PACA-CA::PCSI_0301 1 61262422 61685296 2 2 79 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 75.32 91.96 8.04 0 2 NA Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 2 NA NA 0 0 79 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 3 67069502 67149771 2 2 79 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 75.32 99.97 0 0 3 NA Whitelist PACA-CA 0.68 0.4 NA 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 4 71204124 164732572 1 5 79 2 1 0 1 1 0.57 0.02 9 0 0 9 9 9 10 9 10 75.32 72.34 25.2 0 4 3 Whitelist PACA-CA 0.68 0.08 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 9 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 5 62134012 62191317 2 2 79 0 1 1 0 0 0.57 0.64 2 0 0 NA NA NA NA NA NA 75.32 34.33 65.52 0 2 6 Whitelist PACA-CA 0.68 0.85 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 6 91979139 93457196 1 1 79 1 0 0 0 0 0.39 0.63 2 NA NA NA NA NA 5 3 3 75.32 99.76 0 0 1 3 Whitelist PACA-CA 0.62 0.84 NA NA 0.59 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 7 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 8 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 9 2863383 26807532 6 7 79 3 1 1 1 1 0.57 0.01 13 0 0 13 3 7 17 3 5 75.32 83.94 13.51 0 2 4 Whitelist PACA-CA 0.62 0.05 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 13 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 10 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 11 NA NA 0 0 79 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 12 60917530 61094331 3 3 79 1 0 1 1 0 0.8 0.28 4 0 0 4 0 3 8 4 6 75.32 96 0 5 3 4 Whitelist PACA-CA 0.87 0.52 0 0 0.84 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 13 85186879 89027571 2 2 79 0 0 1 1 0 0.57 0.75 3 0 0 NA NA NA NA NA NA 75.32 100 0 0 3 4 Whitelist PACA-CA 0.68 0.92 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 15 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 16 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 17 42038347 44538738 1 1 79 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 11 3 3 75.32 15.96 78.91 0 2 5 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 18 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 19 11500952 22359568 1 6 79 0 1 0 1 4 0.57 0 3 0 0 NA NA NA 5 5 5 75.32 99.82 0 0 3 4 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 20 8088394 8547336 4 4 79 2 0 2 0 0 0.26 0 1 0 0 NA NA NA 10 4 4 75.32 92.93 0 0 3 NA Whitelist PACA-CA 19 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0301 X 16410381 16425575 1 1 79 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 75.32 0.01 99.99 0 1 2 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0301 PACA 0.98 3.14 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 PACA-CA DO49424 PCSI_0301 male deceased C25.0/C25.9 no treatment 84 341 341 Current reformed smoker, duration not specified 12 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 11.22 PACA-CA::PCSI_0302 1 245980277 246291478 1 1 12 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 4 4 29.14 90.48 6.54 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 6 56019362 71746306 3 3 12 0 1 1 1 0 0.8 0 9 0 0 9 9 9 11 9 11 29.14 99.16 0.69 6 3 2 Whitelist PACA-CA 0.87 0 0 0 0.84 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 6 0.25 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 9 21543064 38507509 1 2 12 1 0 1 0 0 0.57 0.08 5 NA 0 5 5 5 7 7 7 29.14 3.6 95.71 0 1 2 Whitelist PACA-CA 0.68 0.22 NA 0 0.64 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 4 0.17 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 10 NA NA 0 0 12 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.68 NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 12 19433215 73464418 1 1 12 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 29.14 59.55 40.37 0 1 2 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.08 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 18 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.52 NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0302 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0302 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51534 PCSI_0302 female deceased C25 chemotherapy disease progression 79 278 278 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Daily Drinker Included Panc-AdenoCA PACA CA 1 9.14 PACA-CA::PCSI_0303 1 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 3 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 5 127377175 127417651 1 1 28 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 22.13 0 99.88 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 2 0.04 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 6 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 7 88362659 88462202 3 3 28 0 1 1 1 0 0.8 0 3 0 0 NA NA NA 8 4 4 22.13 97.27 0 0 3 4 Whitelist PACA-CA 0.87 0.02 0 0 0.84 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 6 0.11 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 12 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 14 20531778 31913530 1 7 28 0 2 0 0 5 0.11 0 2 0 0 NA NA NA 5 4 5 22.13 16.87 79.42 0 1 2 Whitelist PACA-CA 18 0.77 0 0 0 0.48 1 Linked to high confidence PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA With other complex events 9 0.16 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 15 NA NA 0 0 28 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.77 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 16 NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.39 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 17 NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.39 NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 18 18793459 48361192 5 11 28 1 1 1 2 6 0.9 0 16 0 0 16 14 16 16 14 14 22.13 69.7 25.65 0 2 1 Whitelist PACA-CA 0.87 0 0 0 0.92 1 High confidence PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA Canonical without polyploidization 16 0.29 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0303 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0303 PACA 0.52 2.1 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579420_-_G,CN:1 2 PACA-CA DO49427 PCSI_0303 female alive no treatment 69 1483 1483 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 48.78 PACA-CA::PCSI_0305 1 1046354 241190930 1 11 166 5 1 0 0 5 0.01 0.89 18 0 0 18 5 9 19 5 6 66.05 87.93 12.07 0 5 3 Whitelist PACA-CA 0.54 1 0 0 0.19 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 17 0.05 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 2 147370933 187071951 13 17 166 2 2 3 6 4 0.35 0 21 0 0 21 12 16 38 12 12 66.05 56.84 40.17 9 4 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA With other complex events 30 0.09 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 3 NA NA 0 0 166 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 4 60403609 71607335 6 6 166 3 0 2 1 0 0.34 0 2 0 0 NA NA NA 22 11 11 66.05 29.32 68.32 0 2 4 Whitelist PACA-CA 0.62 0 0 0 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 12 0.04 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 5 9268644 171360144 1 10 166 2 0 0 0 8 0.11 1 12 0 0 12 7 11 13 7 7 66.05 96 3.87 0 3 2 Whitelist PACA-CA X 0.62 1 0 0 0.48 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 12 0.04 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 6 5351620 157779955 1 8 166 5 0 0 0 3 0 1 8 0 0 8 5 8 11 5 5 66.05 98.74 1.11 0 3 2 Whitelist PACA-CA 0.54 1 0 0 0.07 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 13 0.04 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 7 68441854 68691905 1 1 166 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA 6 4 4 66.05 99.14 0.64 0 2 3 Whitelist PACA-CA 0.62 0.3 NA NA 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 8 36078759 145271357 1 5 166 2 1 0 0 2 0.3 1 8 0 0 8 8 8 9 8 8 66.05 99.99 0 0 4 5 Whitelist PACA-CA 0.62 1 0 0 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 9 10337009 104788446 1 5 166 4 0 1 0 0 0.04 0.54 10 0 0 10 5 10 13 5 11 66.05 1.69 98.17 0 2 1 Whitelist PACA-CA 0.45 0.77 0 0 0.36 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 10 0.03 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 10 21750510 135321145 1 6 166 1 1 1 0 3 0.8 1 5 0 0 5 3 4 6 3 5 66.05 47.92 48.61 0 3 1 Whitelist PACA-CA 0.93 1 0 0 0.84 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 9 0.03 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 11 56459841 66295694 3 5 166 1 0 1 1 2 0.8 0.36 5 0 0 5 0 4 8 4 6 66.05 95.42 4.15 0 2 3 Whitelist PACA-CA 5 0.93 0.61 0 0 0.84 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 12 9777312 94042340 3 9 166 1 1 0 1 6 0.8 0 4 0 0 4 3 4 8 3 4 66.05 97.88 2.04 1 4 2 Whitelist PACA-CA 0.85 0.01 0 0 0.84 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 12 0.04 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 13 29371893 41480110 1 6 166 0 0 1 1 4 0.57 0.83 3 0 0 NA NA NA 7 5 7 66.05 100 0 0 5 4 Whitelist PACA-CA 0.93 0.97 0 0 0.64 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 14 29593298 57008209 1 3 166 3 0 0 0 0 0.03 0.65 5 0 0 5 5 5 13 11 11 66.05 70.96 28.12 0 3 2 Whitelist PACA-CA 0.41 0.86 0 0 0.33 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 6 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 15 90505563 91202847 1 1 166 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 6 3 4 66.05 87.15 12.75 0 2 5 Whitelist PACA-CA 0.62 0.59 NA NA 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 16 6597506 79177206 1 4 166 2 2 0 0 0 0.26 0.63 6 0 0 6 3 6 7 3 3 66.05 99.85 0.05 0 3 4 Whitelist PACA-CA 0.62 0.85 0 0 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 17 72566352 76610517 1 4 166 2 0 0 0 2 0.11 0.81 6 0 0 6 3 4 10 3 4 66.05 99.98 0 0 4 1 Whitelist PACA-CA 0.54 0.95 0 0 0.48 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 6 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 18 NA NA 0 0 166 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 9 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.06 0 NA NA 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 19 22374620 28914188 1 2 166 2 0 0 0 0 0.11 0.01 8 0 0 8 0 3 22 3 4 66.05 75.1 17.62 2 6 2 Whitelist PACA-CA 0.54 0.03 0 0 0.48 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 20 6686753 7719382 2 2 166 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 8 3 5 66.05 98.98 0.05 0 4 2 Whitelist PACA-CA 0.68 0.01 0 0 0.64 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 21 NA NA 0 0 166 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.35 NA NA NA 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 22 43771538 45019484 1 1 166 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 66.05 88.38 11.62 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 2 0.01 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0305 X 19338530 119783007 1 5 166 1 0 0 1 3 0.57 0.29 10 0 0 10 7 10 10 7 7 66.05 18.84 81.16 0 2 1 Whitelist PACA-CA 5 0.93 0.53 0 0 0.64 1 No PACA-CA PCSI_0305 PACA 0.89 3.08 Panc-AdenoCA NA 7 0.02 frameshift_deletion,17_7578483_-_G,CN:3 3 PACA-CA DO49430 PCSI_0305 male deceased combined chemo+radiation therapy complete response 81 821 821 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.01 PACA-CA::PCSI_0307 1 40259101 59847475 4 4 43 0 0 3 1 0 0.11 0.15 11 0 0 11 11 11 16 15 15 25.68 29.46 70.53 1 2 3 Whitelist PACA-CA 0.54 0.35 0 0 0.48 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 8 0.09 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 2 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 3 NA NA 0 0 43 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 4 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 5 81882184 122927746 1 1 43 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.68 0 99.88 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 6 64529563 136604930 9 9 43 4 1 2 2 0 0.55 0 18 0 0 18 18 18 22 22 22 25.68 54.03 45.8 0 1 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 High confidence PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA Canonical without polyploidization 18 0.21 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 8 39759062 43690672 1 2 43 1 1 0 0 0 0.57 0.07 4 0 0 4 0 4 5 3 5 25.68 24.4 72.07 0 2 1 Whitelist PACA-CA 0.68 0.2 0 0 0.64 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 4 0.05 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 9 18390808 35402638 1 7 43 1 1 1 1 3 1 0 8 0 0 8 4 8 13 4 6 25.68 30.58 66.34 0 1 2 Whitelist PACA-CA 0.96 0 0 0 1 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 11 0.13 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 10 33811477 37161527 4 4 43 1 1 1 1 0 1 0 6 0 0 6 5 6 9 5 5 25.68 25.86 70.17 0 2 3 Whitelist PACA-CA 1 0.02 0 0 1 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 8 0.09 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 11 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 12 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 13 42787228 46247645 1 1 43 0 1 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 3 5 25.68 99.42 0.58 0 1 3 Whitelist PACA-CA 0.62 0.87 NA NA 0.59 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 17 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 18 48025699 51649108 1 1 43 1 0 0 0 0 0.39 0.11 2 NA NA NA NA NA 4 3 3 25.68 62.27 37.69 0 0 1 Whitelist PACA-CA 0.62 0.28 NA NA 0.59 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 2 0.02 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 19 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 20 NA NA 0 0 43 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.82 NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 21 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0307 X NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0307 PACA 0.81 1.8 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49433 PCSI_0307 male deceased combined chemo+radiation therapy complete response 48 456 455 Smoking history not documented 18 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 15 PACA-CA::PCSI_0310 1 27702575 110552013 1 2 75 1 1 0 0 0 0.57 0.39 2 0 0 NA NA NA 7 5 5 37.37 36.49 63.47 0 1 2 Whitelist PACA-CA 0.68 0.63 0 0 0.64 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 2 168839709 168916088 1 1 75 0 1 0 0 0 0.39 0.68 2 0 NA NA NA NA 6 6 6 37.37 27.51 72.38 0 2 3 Whitelist PACA-CA 0.62 0.88 0 NA 0.59 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 3 19125100 111731529 2 3 75 0 0 1 1 1 0.57 0.37 7 0 0 7 3 6 7 3 3 37.37 50.61 49.26 0 3 2 Whitelist PACA-CA 0.87 0.62 0 0 0.64 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 4 54324483 54656007 1 1 75 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 5 3 3 37.37 48.79 48.84 0 2 3 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 5 50384882 133987298 1 2 75 1 1 0 0 0 0.57 0.47 3 0 0 NA NA NA 5 3 3 37.37 60.62 36.72 0 2 1 Whitelist PACA-CA 0.68 0.72 0 0 0.64 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 6 NA NA 0 0 75 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 9 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.25 0 NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 7 NA NA 0 0 75 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 8 5 8 0 0 0 0 0 0 Whitelist PACA-CA NA 0.08 0 NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 8 81198246 109920368 1 1 75 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 5 6 37.37 55.08 44.92 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 9 NA NA 0 0 75 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.93 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 10 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 11 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 12 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 13 NA NA 0 0 75 0 0 0 0 0 NA 0.75 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 0 NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 14 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 15 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 16 15191662 79097322 1 4 75 0 1 1 1 1 0.8 0.05 3 0 0 NA NA NA 5 5 5 37.37 5.36 94.49 0 2 4 Whitelist PACA-CA 0.68 0.17 0 0 0.84 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 17 31311526 43841207 2 3 75 0 2 0 0 1 0.11 0.05 10 0 0 10 3 7 16 3 7 37.37 48.56 47 0 4 6 Whitelist PACA-CA 0.62 0.17 0 0 0.48 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 18 21101449 21123815 1 1 75 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 37.37 92.1 1.52 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 19 NA NA 0 0 75 0 0 0 0 0 NA 0.06 NA 0.52 NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.19 0.52 NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 20 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 21 NA NA 0 0 75 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.47 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 22 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0310 X NA NA 0 0 75 0 0 0 0 0 NA 0.79 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.94 NA NA NA 0 No PACA-CA PCSI_0310 PACA 0.43 2 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 PACA-CA DO51495 PCSI_0310 male deceased combined chemo+radiation therapy complete response 66 729 728 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 23.98 PACA-CA::PCSI_0311 1 26493620 241084356 1 2 57 2 0 0 0 0 0.11 0.63 5 NA 0.01 5 3 4 7 3 4 33.66 47.57 52.43 0 1 3 Whitelist PACA-CA 0.54 0.84 NA 0.01 0.48 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 2 82619 185702245 1 7 57 0 0 0 2 5 0.11 0.03 1 0 0.5 NA NA NA NA NA NA 33.66 0 99.88 0 2 NA Whitelist PACA-CA 0.62 0.1 0 0.5 0.48 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 9 0.08 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 3 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 4 189843039 190009513 1 1 57 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 9 5 7 33.66 6.59 93.4 0 1 2 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 5 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 6 162634415 162879379 2 2 57 1 1 0 0 0 0.57 0.39 3 0 0 NA NA NA 6 6 6 33.66 12.55 87.31 0 1 2 Whitelist PACA-CA 0.68 0.64 0 0 0.64 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 7 NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 8 NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 9 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 10 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 11 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 12 124887160 125161147 1 1 57 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 6 4 6 33.66 25.13 71.12 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 13 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 14 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 15 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 16 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 18 1045390 41851252 13 14 57 3 4 3 3 1 0.97 0 4 0 0 4 3 4 4 3 3 33.66 71.41 28.49 1 2 1 Whitelist PACA-CA 0.98 0 0 0 0.98 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 27 0.24 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 22 NA NA 0 0 57 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.74 NA NA NA 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0311 X 49057359 87521970 5 13 57 0 1 2 2 8 0.53 0 3 0 0 NA NA NA 5 5 5 33.66 29.62 70.16 36 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0311 PACA 0.55 1.97 Panc-AdenoCA NA 18 0.16 nonsynonymous_SNV,17_7577548_T_C,CN:1 2 PACA-CA DO49436 PCSI_0311 female deceased chemotherapy complete response 69 663 663 Smoking history not documented 15 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 21.81 PACA-CA::PCSI_0312 1 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 2 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 3 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 5 57062774 170061811 1 2 14 1 0 0 0 1 0.39 0.22 3 NA NA NA NA NA 4 3 3 11.53 51.72 48.14 0 1 2 Whitelist PACA-CA 0.68 0.45 NA NA 0.59 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 3 0.11 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 6 NA NA 0 0 14 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.8 NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 9 8698375 30895722 4 4 14 1 1 1 1 0 1 0 7 0 0 7 4 7 7 4 4 11.53 11.54 87.78 0 1 2 Whitelist PACA-CA 1 0.01 0 0 1 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 8 0.29 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 12 131942550 132494998 3 3 14 1 0 1 1 0 0.8 0.03 2 0 0 NA NA NA NA NA NA 11.53 0.41 99.51 0 1 2 Whitelist PACA-CA 0.87 0.1 0 0 0.84 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 6 0.21 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 16 78632872 78669653 1 1 14 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 11.53 0.04 99.85 0 1 2 Whitelist PACA-CA 0.62 0.17 NA NA 0.59 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 2 0.07 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 17 14274456 17769491 1 1 14 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 4 4 11.53 87.92 6.84 0 1 2 Whitelist PACA-CA 0.62 0.17 NA NA 0.59 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 2 0.07 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 18 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.57 NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0312 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0312 PACA 0.57 1.93 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49439 PCSI_0312 female deceased combined chemo+radiation therapy complete response 79 608 609 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 20 PACA-CA::PCSI_0324 1 172689556 248439803 4 20 204 1 1 1 1 16 1 0 3 0 0 NA NA NA 6 5 5 25.03 39.57 60.1 0 3 4 Whitelist PACA-CA 16 0.96 0.01 0 0 1 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 24 0.06 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 2 17303119 223676329 1 8 204 2 6 0 0 0 0.01 0.13 7 0 0 7 7 7 9 9 9 25.03 0.36 99.55 0 2 3 Whitelist PACA-CA 0.21 0.32 0 0 0.16 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 16 0.04 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 3 87030011 137441716 2 5 204 1 1 0 0 3 0.57 0 2 0 0 NA NA NA 19 5 5 25.03 61.71 38.16 0 2 3 Whitelist PACA-CA 0.93 0.02 0 0 0.64 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 7 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 4 119183598 119322647 5 5 204 0 2 2 1 0 0.53 0.21 1 0 0 NA NA NA 10 6 6 25.03 50.76 49.23 0 2 NA Whitelist PACA-CA 0.68 0.44 0 0 0.64 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 10 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 5 43481679 126819152 3 17 204 0 1 1 1 14 0.8 0 10 0 0 10 10 10 19 15 15 25.03 13.61 83.53 5 1 2 Whitelist PACA-CA 0.68 0.01 0 0 0.84 1 High confidence PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA Canonical without polyploidization 20 0.05 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 6 33001634 33148287 2 2 204 0 0 1 1 0 0.57 0.3 1 0 0 NA NA NA 15 15 15 25.03 1.74 95.04 0 2 NA Whitelist PACA-CA 0.68 0.55 0 0 0.64 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 7 5562244 151748583 1 8 204 0 8 0 0 0 0 0.44 9 0 0 9 9 9 9 9 9 25.03 0.92 98.86 0 2 3 Whitelist PACA-CA 0.01 0.69 0 0 0 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 16 0.04 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 8 78094013 140299410 8 8 204 0 5 2 1 0 0.07 0.08 6 0 0 6 6 6 7 7 7 25.03 6.22 93.77 0 1 2 Whitelist PACA-CA 0.54 0.23 0 0 0.48 1 Low confidence PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA Canonical without polyploidization 16 0.04 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 9 3136712 29875334 3 4 204 0 2 1 0 1 0.3 0.72 1 0 0 NA NA NA 7 3 3 25.03 58.3 41 0 1 NA Whitelist PACA-CA 0.68 0.9 0 0 0.59 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 7 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 10 74793147 115657984 1 3 204 0 1 1 0 1 0.57 0.09 1 0 0 NA NA NA NA NA NA 25.03 0 99.82 0 2 NA Whitelist PACA-CA 0.87 0.25 0 0 0.64 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 5 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 11 1702322 132735370 1 5 204 0 5 0 0 0 0 0.51 3 0 0 NA NA NA NA NA NA 25.03 99.28 0.3 0 1 2 Whitelist PACA-CA 0.1 0.75 0 0 0.07 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 10 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 12 50682494 110443498 1 4 204 1 3 0 0 0 0.11 0.07 3 0 0 NA NA NA 4 4 4 25.03 1.7 98.22 0 2 1 Whitelist PACA-CA 0.54 0.2 0 0 0.48 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 8 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 13 39029038 49150635 1 2 204 0 2 0 0 0 0.11 0.17 2 NA 0 NA NA NA NA NA NA 25.03 0.3 99.7 0 2 3 Whitelist PACA-CA 0.54 0.39 NA 0 0.48 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 14 56951376 104604086 1 4 204 0 3 1 0 0 0.11 0.42 3 0 0 NA NA NA NA NA NA 25.03 0.43 98.65 0 2 3 Whitelist PACA-CA 0.54 0.67 0 0 0.48 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 8 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 15 62302287 98524874 1 3 204 0 3 0 0 0 0.03 0.39 4 0 0 4 4 4 5 5 5 25.03 0.95 99.05 0 2 3 Whitelist PACA-CA 0.41 0.63 0 0 0.33 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 6 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 16 26289545 88605880 1 7 204 1 4 0 0 2 0.04 0.51 7 0 0 7 5 7 7 5 5 25.03 2.01 97.9 0 2 1 Whitelist PACA-CA 0.41 0.75 0 0 0.36 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 12 0.03 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 17 43152324 73051640 1 4 204 0 4 0 0 0 0.01 0.67 1 0 0 NA NA NA NA NA NA 25.03 27.33 68.22 0 2 NA Whitelist PACA-CA 0.21 0.87 0 0 0.16 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 8 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 18 20720153 49455929 2 4 204 0 0 2 2 0 0.26 0.13 1 0 0 NA NA NA 6 5 5 25.03 86.31 7.93 2 1 NA Whitelist PACA-CA 0.62 0.32 0 0 0.59 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 8 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 19 35034031 40515793 5 5 204 1 1 2 1 0 0.9 0 3 0 0 NA NA NA 5 5 5 25.03 4.13 95.7 0 2 3 Whitelist PACA-CA 0.93 0.01 0 0 0.92 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 10 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 20 19935861 57154780 1 5 204 1 3 0 0 1 0.11 0.46 5 0 0 5 4 5 5 4 5 25.03 37.09 61.93 0 2 3 Whitelist PACA-CA 0.62 0.7 0 0 0.48 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 9 0.02 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 21 NA NA 0 0 204 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 22 31935575 41529873 1 2 204 0 2 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 25.03 0 100 0 2 NA Whitelist PACA-CA 0.54 1 NA 0 0.48 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0324 X 7809411 72518848 2 2 204 0 1 1 0 0 0.57 0.42 3 0 0 NA NA NA 6 6 6 25.03 58.34 41.44 0 1 2 Whitelist PACA-CA 0.68 0.67 0 0 0.64 1 No PACA-CA PCSI_0324 PACA 0.56 1.86 Panc-AdenoCA NA 4 0.01 stopgain,17_7577058_A_C,CN:1 2 PACA-CA DO51481 PCSI_0324 female deceased combined chemo+radiation therapy complete response 59 587 587 Smoking history not documented 2 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 19.31 PACA-CA::PCSI_0325 1 224516026 224555787 1 1 207 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 68.38 99.98 0 0 4 6 Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 2 205627559 206294923 1 3 207 2 1 0 0 0 0.3 0 4 0 0 4 4 4 5 5 5 68.38 99.89 0 0 3 4 Whitelist PACA-CA 0.62 0 0 0 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 3 85734262 174611972 56 59 207 15 13 16 12 3 0.87 0 85 0 0 85 6 6 89 6 6 68.38 59.21 37.48 3 4 3 Whitelist PACA-CA 0.96 0 0 0 0.91 1 Low confidence PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA With other complex events 115 0.28 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 4 1772182 152156601 1 4 207 3 1 0 0 0 0.11 0.03 12 0 0 12 7 12 13 7 7 68.38 1.22 98.76 1 2 1 Whitelist PACA-CA 0.54 0.1 0 0 0.48 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 5 24489261 24504356 1 1 207 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 68.38 25.47 71.85 0 3 4 Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 6 162011434 162530462 2 2 207 2 0 0 0 0 0.11 0.38 6 0 0 6 5 6 10 5 5 68.38 96.66 0.25 0 2 1 Whitelist PACA-CA 0.54 0.63 0 0 0.48 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 7 2311735 70487292 26 49 207 2 7 10 7 23 0.17 0 59 0 0 59 7 14 72 8 14 68.38 96.52 0.76 16 4 5 Whitelist PACA-CA 12 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA With other complex events 75 0.18 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 8 9719885 70633021 1 7 207 3 1 0 0 3 0.11 0.15 7 0 0 7 3 7 11 5 5 68.38 76.73 19.85 0 3 4 Whitelist PACA-CA 6 0.41 0.36 0 0 0.48 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 11 0.03 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 9 9235239 25992821 1 3 207 3 0 0 0 0 0.03 0.07 6 0 0 6 3 6 10 4 7 68.38 74.95 24.36 0 2 1 Whitelist PACA-CA 0.41 0.21 0 0 0.33 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 10 83838039 84487405 1 1 207 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 68.38 0.48 99.34 0 1 2 Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 11 6541985 123115860 1 14 207 3 2 0 0 9 0.14 0 21 0 0 21 4 5 22 4 5 68.38 40.87 58.7 6 2 4 Whitelist PACA-CA 0.68 0.01 0 0 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 12 21197763 34726455 1 22 207 0 0 1 1 20 0.57 0 15 0 0 15 8 10 16 8 8 68.38 84.13 15.79 0 5 7 Whitelist PACA-CA 7 0.76 0 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA With other complex events 24 0.06 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 13 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 14 67732208 68058242 1 1 207 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 68.38 98.78 0.3 0 2 3 Whitelist PACA-CA 0.62 0.1 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 15 NA NA 0 0 207 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.17 NA NA NA 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 16 78539700 78671338 1 1 207 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 68.38 99.76 0.15 0 2 3 Whitelist PACA-CA 0.62 0.41 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 17 2354824 9671974 1 1 207 0 0 1 0 0 0.39 0.67 2 0.08 NA NA NA NA 6 3 5 68.38 93.41 1.77 0 2 3 Whitelist PACA-CA 0.62 0.87 0.08 NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 18 29528652 73029108 2 2 207 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 11 3 4 68.38 78.45 15.67 1 1 3 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 19 NA NA 0 0 207 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.95 NA NA NA 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 20 14953154 15006786 1 1 207 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 68.38 99.03 0 0 4 NA Whitelist PACA-CA 0.62 0.34 NA NA 0.59 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 21 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 22 NA NA 0 0 207 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0325 X 31832194 120588122 1 2 207 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 68.38 79.5 20.5 0 1 NA Whitelist PACA-CA 0.54 0.02 NA 0 0.48 1 No PACA-CA PCSI_0325 PACA 0.67 2.85 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_A_G,CN:3 3 PACA-CA DO51467 PCSI_0325 male deceased combined chemo+radiation therapy complete response 67 471 471 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 15.49 PACA-CA::PCSI_0326 1 211962300 212229973 2 2 67 1 0 0 1 0 0.57 0 1 0 0 NA NA NA 15 6 8 32.93 85.39 6.17 0 2 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 2 79327670 79524999 1 1 67 1 0 0 0 0 0.39 1 1 0.05 NA NA NA NA NA NA NA 32.93 1.68 98.21 0 2 NA Whitelist PACA-CA 0.62 1 0.05 NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 3 17373391 174618434 1 7 67 2 1 0 0 4 0.3 0.14 9 0 0 9 6 9 12 7 7 32.93 12.24 87.71 0 1 2 Whitelist PACA-CA 0.62 0.34 0 0 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 4 85476345 117535508 2 4 67 0 0 1 1 2 0.57 0.8 6 0 0 6 6 6 7 7 7 32.93 85.55 14.2 0 1 2 Whitelist PACA-CA 0.62 0.95 0 0 0.64 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 5 113174946 113553131 1 1 67 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 7 4 4 32.93 16.63 83.22 0 0 1 Whitelist PACA-CA 0.62 0.95 NA NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 6 63754605 63768424 1 1 67 0 0 0 1 0 0.39 0.8 1 NA NA NA NA NA NA NA NA 32.93 0 99.76 0 2 NA Whitelist PACA-CA 0.62 0.95 NA NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 7 138239528 141328359 2 2 67 0 0 1 1 0 0.57 1 4 0 0 4 4 4 7 7 7 32.93 1.58 98.19 0 1 2 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 8 20458248 141947653 1 2 67 2 0 0 0 0 0.11 0.78 2 NA 0.01 NA NA NA NA NA NA 32.93 1.85 98.15 3 1 2 Whitelist PACA-CA 0.54 0.93 NA 0.01 0.48 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 9 21590793 22757374 1 1 67 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 32.93 99.3 0 0 0 1 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 10 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 11 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 12 NA NA 0 0 67 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.93 NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 13 71768102 104383295 4 4 67 1 2 1 0 0 0.57 0 7 0 0 7 3 5 13 7 9 32.93 79.62 20.38 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 8 0.06 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 14 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 15 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 16 78665709 78677719 1 1 67 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.93 0.01 99.89 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 17 19753114 21953083 1 1 67 0 0 0 1 0 0.39 0.43 1 NA NA NA NA NA 4 4 4 32.93 23.76 76.23 0 2 NA Whitelist PACA-CA 0.62 0.68 NA NA 0.59 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 18 19665442 76894212 4 6 67 1 1 1 1 2 1 0 6 0 0 6 4 6 9 7 7 32.93 78.58 16.6 0 1 2 Whitelist PACA-CA 0.93 0 0 0 1 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 19 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 20 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 21 NA NA 0 0 67 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.79 NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 22 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0326 X NA NA 0 0 67 0 0 0 0 0 NA 0.39 NA 0 NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist PACA-CA NA 0.64 0 NA NA 0 No PACA-CA PCSI_0326 PACA 0.84 1.79 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577135_A_T,CN:1 1 PACA-CA DO51503 PCSI_0326 female deceased combined chemo+radiation therapy complete response 46 837 827 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 27.53 PACA-CA::PCSI_0328 1 216578489 216925727 1 1 36 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 4 4 4 20.47 11.05 88.95 0 1 2 Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 2 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 3 3456427 3827970 1 1 36 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 20.47 0.19 99.69 1 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 4 74965485 127116807 1 3 36 2 0 0 0 1 0.11 0.73 2 NA 0 NA NA NA NA NA NA 20.47 0.12 99.86 0 1 2 Whitelist PACA-CA 0.41 0.91 NA 0 0.48 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 5 0.07 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 5 114093334 114117777 1 1 36 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 20.47 0.01 99.85 0 1 2 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 6 26096827 165863039 1 4 36 4 0 0 0 0 0.01 0.17 6 0 0 6 5 6 7 5 5 20.47 0.36 99.5 0 2 1 Whitelist PACA-CA 0.21 0.38 0 0 0.16 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 8 0.11 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 7 148394132 152354112 2 2 36 2 0 0 0 0 0.11 0.13 4 0 0 4 3 4 9 4 4 20.47 2.99 96.78 0 1 0 Whitelist PACA-CA 0.54 0.32 0 0 0.48 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 8 110572953 110635149 1 2 36 0 0 0 1 1 0.39 0.71 1 NA NA NA NA NA NA NA NA 20.47 24.45 75.54 0 3 NA Whitelist PACA-CA 0.68 0.9 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 3 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 9 21178192 22781806 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 20.47 99.3 0 0 0 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 11 NA NA 0 0 36 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.88 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 12 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 14 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 15 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 16 19245031 78755225 1 3 36 3 0 0 0 0 0.03 0.07 4 0 0 4 4 4 5 5 5 20.47 1.88 98.03 1 1 2 Whitelist PACA-CA 0.41 0.21 0 0 0.33 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 6 0.08 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 17 NA NA 0 0 36 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.5 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 18 48571760 60954770 1 2 36 2 0 0 0 0 0.11 0.25 3 NA 0 NA NA NA 5 3 3 20.47 87.13 8.23 0 1 0 Whitelist PACA-CA 0.54 0.49 NA 0 0.48 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 19 11479257 22000094 2 2 36 1 0 0 1 0 0.57 0.16 4 NA 0 4 4 4 4 4 4 20.47 36.92 62.91 0 1 2 Whitelist PACA-CA 0.68 0.36 NA 0 0.64 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 20 13492065 19692454 1 1 36 0 0 0 1 0 0.39 0.18 3 NA NA NA NA NA 5 5 5 20.47 67.44 31.58 0 3 2 Whitelist PACA-CA 0.62 0.4 NA NA 0.59 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 21 NA NA 0 0 36 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.61 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 22 NA NA 0 0 36 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.6 NA NA NA 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0328 X 143751532 144560671 2 2 36 1 0 1 0 0 0.57 0.11 1 0 0 NA NA NA NA NA NA 20.47 100 0 0 1 NA Whitelist PACA-CA 0.68 0.28 0 0 0.64 0 No PACA-CA PCSI_0328 PACA 0.22 1.88 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51479 PCSI_0328 male alive no treatment 70 1691 NA Smoking history not documented 16 yes Daily Drinker Included Panc-AdenoCA PACA CA 1 55.62 PACA-CA::PCSI_0329 1 NA NA 0 0 31 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.75 NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 2 NA NA 0 0 31 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 3 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 4 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 5 178113343 179826211 1 3 31 1 0 1 1 0 0.8 0.44 3 0 0 NA NA NA 4 4 4 18.56 0.86 99.01 0 1 2 Whitelist PACA-CA 0.87 0.69 0 0 0.84 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 6 0.1 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 6 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 7 89956842 90057936 1 1 31 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.56 0 99.77 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 8 12671009 12862762 1 1 31 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 3 3 18.56 28.34 71.54 0 0 1 Whitelist PACA-CA 0.62 0.87 NA NA 0.59 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 9 21031945 34054180 1 2 31 0 1 1 0 0 0.57 0.34 4 NA 0 4 0 3 8 4 4 18.56 27.69 71.64 0 0 1 Whitelist PACA-CA 0.68 0.59 NA 0 0.64 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 10 57372997 57424807 1 1 31 1 0 0 0 0 0.39 0.65 1 NA NA NA NA NA NA NA NA 18.56 0 99.81 0 2 NA Whitelist PACA-CA 0.62 0.86 NA NA 0.59 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 11 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 13 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 14 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 15 28270226 76515626 1 4 31 1 0 0 1 2 0.57 0 6 0 0 6 3 4 6 3 4 18.56 72.91 26.98 10 2 1 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 6 0.1 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 16 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 17 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.8 NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 18 NA NA 0 0 31 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.79 NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 19 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 20 21830172 26207356 1 2 31 2 0 0 0 0 0.11 0 5 0 0 5 4 5 7 4 4 18.56 78.26 14.74 0 2 3 Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 21 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 22 30906546 30990764 1 1 31 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 9 4 5 18.56 100 0 0 9 11 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0329 X 8614047 39205381 1 4 31 0 0 1 1 2 0.57 0.02 10 0 0 10 3 5 12 3 5 18.56 62.08 37.92 0 1 2 Whitelist PACA-CA 0.68 0.08 0 0 0.64 0 No PACA-CA PCSI_0329 PACA 0.73 1.95 Panc-AdenoCA NA 6 0.1 nonsynonymous_SNV,17_7577124_A_C,CN:1 2 PACA-CA DO51531 PCSI_0329 male deceased combined chemo+radiation therapy complete response 48 1273 1273 Smoking history not documented 35 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 41.88 PACA-CA::PCSI_0334 1 4462263 224763647 2 6 153 1 1 1 1 2 1 0.17 1 0 0 NA NA NA NA NA NA 21.91 0 100 0 2 NA Whitelist PACA-CA 0.93 0.39 0 0 1 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 10 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 2 241589512 241625993 1 1 153 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 21.91 0 99.88 0 2 NA Whitelist PACA-CA 0.62 0.01 NA NA 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 2 0.01 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 3 168774538 170919458 1 1 153 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 21.91 1.08 98.89 0 2 3 Whitelist PACA-CA 0.62 0 NA NA 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 2 0.01 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 4 53555005 59565669 3 3 153 1 0 1 1 0 0.8 0.05 3 NA 0 NA NA NA NA NA NA 21.91 0.09 99.81 1 2 1 Whitelist PACA-CA 0.87 0.16 NA 0 0.84 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 6 0.02 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 5 NA NA 0 0 153 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.01 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 6 29312723 68458751 2 11 153 0 0 1 1 9 0.57 0 15 0 0 15 6 15 23 11 11 21.91 87.09 12.65 8 2 1 Whitelist PACA-CA 0.98 0 0 0 0.64 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 13 0.04 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 7 NA NA 0 0 153 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 8 NA NA 0 0 153 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.1 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 9 21549640 36727163 1 5 153 2 0 2 0 1 0.26 1 4 0 0 4 0 3 5 3 3 21.91 19.78 79.52 3 0 1 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 9 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 10 36053285 71271526 3 10 153 3 0 0 0 7 0.03 0 8 0 0 8 5 8 17 11 11 21.91 36.13 60.29 6 1 2 Whitelist PACA-CA 0.68 0 0 0 0.33 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 13 0.04 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 11 68760269 89098797 12 16 153 2 3 4 3 4 0.88 0 13 0 0 13 3 5 19 5 5 21.91 51.71 44.83 1 1 2 Whitelist PACA-CA 10 0.62 0 0 0 0.91 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 28 0.09 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 12 49278282 101524261 4 4 153 0 2 1 1 0 0.57 0.7 8 0 0 8 8 8 9 9 9 21.91 35.1 61.16 0 1 2 Whitelist PACA-CA 0.68 0.9 0 0 0.64 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 8 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 13 19608126 87304891 1 3 153 2 1 0 0 0 0.3 0.5 6 0 0 6 6 6 8 8 8 21.91 18.23 81.52 0 2 3 Whitelist PACA-CA 0.62 0.74 0 0 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 6 0.02 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 14 22799851 49165949 3 5 153 2 0 0 1 2 0.3 0.03 1 0 0 NA NA NA 7 7 7 21.91 9 90.12 0 2 NA Whitelist PACA-CA 0.62 0.11 0 0 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 8 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 15 37825639 50952315 2 7 153 0 0 1 1 5 0.57 0 4 0 0 4 4 4 15 15 15 21.91 62.65 37.35 0 1 2 Whitelist PACA-CA 6 0.96 0 0 0 0.64 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 9 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 16 NA NA 0 0 153 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 8 4 7 0 0 0 0 0 0 Whitelist PACA-CA NA 0.42 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 17 70308379 70995138 1 1 153 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 4 3 3 21.91 28.19 67.38 0 2 3 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 2 0.01 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 18 26903490 27407413 2 2 153 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 10 7 7 21.91 57.13 42.83 0 2 NA Whitelist PACA-CA 0.68 0.02 0 0 0.64 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 19 NA NA 0 0 153 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 20 NA NA 0 0 153 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 21 NA NA 0 0 153 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 22 17238762 32613324 4 4 153 1 2 0 1 0 0.57 0.01 4 0 0 4 0 3 4 0 3 21.91 2.11 97.89 0 2 3 Whitelist PACA-CA 0.68 0.05 0 0 0.64 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 8 0.03 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0334 X 2951403 55620011 26 38 153 5 5 7 9 12 0.64 0 3 0 0 NA NA NA NA NA NA 21.91 0.04 99.73 0 2 1 Whitelist PACA-CA 0.88 0 0 0 0.71 0 No PACA-CA PCSI_0334 PACA 0.78 1.86 Panc-AdenoCA NA 64 0.21 stopgain,17_7576855_A_G,CN:1 1 PACA-CA DO51536 PCSI_0334 female deceased no treatment 82 446 446 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 14.67 PACA-CA::PCSI_0337 1 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 2 NA NA 0 0 54 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.57 NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 3 59934443 60202616 1 1 54 0 1 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 15.9 0.14 99.73 0 2 3 Whitelist PACA-CA 0.62 0.4 NA NA 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 4 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 5 9780722 10029898 1 1 54 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 15.9 5.53 94.33 0 1 2 Whitelist PACA-CA 0.62 0.5 NA NA 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 6 NA NA 0 0 54 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 7 19739752 37385622 2 2 54 0 0 1 1 0 0.57 1 4 NA 0 4 4 4 6 5 6 15.9 36.42 60.87 7 3 4 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 8 32698993 36950368 1 1 54 0 0 0 1 0 0.39 1 3 NA NA NA NA NA 7 4 4 15.9 93.1 3.48 0 2 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 9 16003998 24326188 13 13 54 4 2 4 3 0 0.84 0 20 0 0 20 6 7 21 6 7 15.9 17.01 82.85 2 2 3 Whitelist PACA-CA 0.9 0 0 0 0.88 0 Low confidence PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA With other complex events 26 0.24 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 10 NA NA 0 0 54 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 11 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 12 114222163 114381930 1 1 54 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA 5 3 3 15.9 28.86 71.06 0 2 3 Whitelist PACA-CA 0.62 0.91 NA NA 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 13 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 14 35744449 35924085 1 1 54 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.9 0 96.29 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 15 22985298 33504818 1 3 54 0 1 0 0 2 0.39 0.06 6 NA 0 6 6 6 10 10 10 15.9 44.2 55.8 0 1 2 Whitelist PACA-CA 0.62 0.19 NA 0 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 16 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 17 33421834 42162690 1 3 54 0 2 1 0 0 0.3 0.02 2 0 0 NA NA NA 8 5 5 15.9 39.02 56.55 0 2 3 Whitelist PACA-CA 0.62 0.07 0 0 0.59 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 6 0.06 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 18 NA NA 0 0 54 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 19 11827395 17911949 7 7 54 1 2 2 2 0 0.93 0 8 0 0 8 4 5 10 4 4 15.9 30.11 69.72 0 3 4 Whitelist PACA-CA 0.96 0 0 0 0.95 0 Low confidence PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA With other complex events 14 0.13 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 20 13387990 30440768 1 2 54 1 1 0 0 0 0.57 0.32 4 NA 0 4 3 4 5 3 3 15.9 0.54 91.23 0 2 1 Whitelist PACA-CA 0.68 0.58 NA 0 0.64 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 21 NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 22 18002578 48276046 1 3 54 0 1 0 1 1 0.57 0 9 0 0 9 5 5 10 5 5 15.9 45.54 54.46 0 2 1 Whitelist PACA-CA 0.87 0.02 0 0 0.64 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 5 0.05 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0337 X NA NA 0 0 54 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0337 PACA 0.63 2.05 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51519 PCSI_0337 female deceased combined chemo+radiation therapy complete response 70 579 579 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 19.05 PACA-CA::PCSI_0338 1 51308307 249192722 20 20 225 8 4 5 3 0 0.42 0 40 0 0 40 8 9 44 8 9 25.72 96.29 0.72 0 3 4 Whitelist PACA-CA 0.66 0 0 0 0.63 1 High confidence PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA With other complex events 40 0.09 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 2 11368327 241973077 1 13 225 0 13 0 0 0 0 0.19 24 0 0 24 24 24 25 25 25 25.72 3.29 96.6 0 2 3 Whitelist PACA-CA 0 0.4 0 0 0 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 26 0.06 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 3 152758420 153107264 2 2 225 0 0 1 1 0 0.57 0.6 2 0 0 NA NA NA 27 21 21 25.72 9.74 90.14 0 2 3 Whitelist PACA-CA 0.68 0.82 0 0 0.64 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 4 19312539 179388805 1 13 225 0 7 0 0 6 0 0.69 15 0 0 15 12 15 18 12 12 25.72 82.15 15.48 0 2 1 Whitelist PACA-CA 9 0.32 0.89 0 0 0.01 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 5 161129755 161225650 2 2 225 0 0 1 1 0 0.57 0.78 2 0 0 NA NA NA 24 20 20 25.72 18.8 81.04 0 3 4 Whitelist PACA-CA 0.68 0.94 0 0 0.64 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 6 143814662 143961867 2 2 225 0 0 1 1 0 0.57 0.02 4 0 0 4 4 4 31 12 12 25.72 18.11 81.65 0 2 3 Whitelist PACA-CA 0.68 0.07 0 0 0.64 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 7 36814671 37234328 6 6 225 0 3 2 1 0 0.34 0.05 4 0 0 4 3 4 26 12 15 25.72 1.87 98.06 0 3 1 Whitelist PACA-CA 0.62 0.17 0 0 0.59 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 8 36066608 48157704 2 3 225 0 1 0 1 1 0.57 0.29 4 0 0 4 0 3 22 19 21 25.72 28.02 71.87 0 1 2 Whitelist PACA-CA 0.62 0.53 0 0 0.64 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 9 97702576 138886459 1 12 225 1 3 2 1 5 0.67 0.16 7 0 0 7 7 7 7 7 7 25.72 99.27 0.56 0 1 2 Whitelist PACA-CA 4 0.68 0.37 0 0 0.74 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 10 3589818 132244293 1 12 225 0 10 0 0 2 0 0.42 13 0 0 13 11 11 14 11 11 25.72 1.8 98.02 0 2 3 Whitelist PACA-CA 0.01 0.67 0 0 0 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 11 6595768 111354727 1 11 225 0 11 0 0 0 0 0.87 19 0 0 19 19 19 20 19 19 25.72 2.75 96.83 0 2 3 Whitelist PACA-CA 0 1 0 0 0 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 12 41463414 118730813 1 6 225 0 6 0 0 0 0 0.2 8 0 0 8 8 8 9 9 9 25.72 3 93.26 0 2 3 Whitelist PACA-CA 0.04 0.43 0 0 0.03 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 13 37711193 107329558 1 6 225 0 6 0 0 0 0 1 8 0 0 8 8 8 9 9 9 25.72 0.61 99.39 0 2 3 Whitelist PACA-CA 0.04 1 0 0 0.03 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 14 34775389 70700806 1 3 225 0 3 0 0 0 0.03 0.18 6 0 0 6 6 6 7 7 7 25.72 1.51 97.58 0 2 3 Whitelist PACA-CA 0.41 0.39 0 0 0.33 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 15 41500002 86542658 1 5 225 0 5 0 0 0 0 0.84 8 0 0 8 8 8 9 9 9 25.72 0.99 99.01 0 2 3 Whitelist PACA-CA 0.1 0.98 0 0 0.07 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 16 69287192 69680757 1 1 225 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 7 7 7 25.72 2.34 97.42 0 2 3 Whitelist PACA-CA 0.62 0.34 NA NA 0.59 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 17 671055 72566973 1 3 225 0 2 0 1 0 0.3 0.3 6 0 0 6 5 6 6 5 5 25.72 30.66 64.89 0 2 3 Whitelist PACA-CA 0.62 0.55 0 0 0.59 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 18 14786613 77593313 1 2 225 0 2 0 0 0 0.11 0.14 2 NA 0 NA NA NA NA NA NA 25.72 67.28 32.06 0 1 2 Whitelist PACA-CA 0.54 0.34 NA 0 0.48 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 19 7537261 51594369 1 3 225 0 3 0 0 0 0.03 0.81 6 0.16 0 6 6 6 7 7 7 25.72 5.15 94.42 0 2 3 Whitelist PACA-CA 0.41 0.95 0.16 0 0.33 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 20 46491287 49826551 2 2 225 0 2 0 0 0 0.11 0.16 4 0 0 4 3 4 10 6 6 25.72 46.8 52.21 0 4 3 Whitelist PACA-CA 0.54 0.37 0 0 0.48 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 21 18705848 26199940 1 2 225 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 25.72 1.02 76.33 0 2 3 Whitelist PACA-CA 0.54 1 NA 0 0.48 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 22 18970689 41689809 1 3 225 0 3 0 0 0 0.03 0.75 7 0 0 7 6 7 9 6 6 25.72 8.1 91.9 0 2 3 Whitelist PACA-CA 0.41 0.92 0 0 0.33 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0338 X 21484632 147888022 1 11 225 0 11 0 0 0 0 1 18 0 0 18 18 18 19 19 19 25.72 2.08 97.69 0 2 3 Whitelist PACA-CA 0 1 0 0 0 1 No PACA-CA PCSI_0338 PACA 0.6 2.02 Panc-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7577121_A_G,CN:1 2 PACA-CA DO51485 PCSI_0338 female deceased combined chemo+radiation therapy complete response 74 1879 1877 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 61.81 PACA-CA::PCSI_0340 1 245359333 245378060 1 1 237 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 71.71 100 0 0 3 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 2 3167627 206554663 14 22 237 6 2 3 3 8 0.46 0.01 38 0 0 38 5 7 41 5 7 71.71 73.53 26.35 0 4 3 Whitelist PACA-CA 0.54 0.06 0 0 0.64 1 Low confidence PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA With other complex events 36 0.08 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 3 60401502 115329737 1 3 237 1 1 0 0 1 0.57 0 4 NA 0 4 3 4 5 3 3 71.71 99.95 0 0 3 0 Whitelist PACA-CA 0.62 0 NA 0 0.64 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 5 0.01 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 4 NA NA 0 0 237 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 5 105643402 116481544 84 85 237 23 19 24 18 1 0.74 0 33 0 0 33 0 3 45 3 3 71.71 46.93 50.38 2 27 2 Whitelist PACA-CA 0.8 0 0 0 0.82 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 169 0.36 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 6 30403092 70443803 2 5 237 0 1 1 2 1 0.57 0.1 11 0 0 11 3 3 13 3 3 71.71 4.68 92.49 0 2 4 Whitelist PACA-CA 0.68 0.26 0 0 0.64 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 9 0.02 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 7 82695169 114553612 1 15 237 1 1 1 1 11 1 0.15 10 0 0 10 6 8 11 7 9 71.71 99.78 0 0 4 5 Whitelist PACA-CA 0.99 0.35 0 0 1 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 19 0.04 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 8 10079699 43698759 1 4 237 4 0 0 0 0 0.01 0.46 7 0 0 7 3 7 13 3 12 71.71 96.34 0.24 9 2 3 Whitelist PACA-CA 0.21 0.7 0 0 0.16 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 8 0.02 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 9 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 10 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 11 NA NA 0 0 237 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 12 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 13 79103091 79219558 1 1 237 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 71.71 100 0 0 4 NA Whitelist PACA-CA 0.62 0.02 NA NA 0.59 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 14 73129225 73251741 1 1 237 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 4 71.71 96.18 0.11 0 2 4 Whitelist PACA-CA 0.62 0.04 NA NA 0.59 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 15 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 16 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 17 6770813 20033751 1 3 237 0 1 1 0 1 0.57 0.84 4 0 0 4 0 3 5 0 3 71.71 77.95 22.03 1 1 2 Whitelist PACA-CA 0.62 0.98 0 0 0.64 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 5 0.01 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 18 149060 29571306 48 49 237 11 13 14 10 1 0.84 0 37 0 0 37 10 19 44 10 19 71.71 24.03 75.92 0 2 5 Whitelist PACA-CA 0.93 0 0 0 0.88 1 High confidence PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA With other complex events 97 0.2 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 19 NA NA 0 0 237 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.26 NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 20 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 21 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 22 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0340 X 21122420 46440141 9 19 237 1 2 4 2 10 0.55 0.01 1 0 0 NA NA NA NA NA NA 71.71 100 0 0 1 NA Whitelist PACA-CA 7 0.81 0.03 0 0 0.64 1 No PACA-CA PCSI_0340 PACA 0.41 3.29 Panc-AdenoCA NA 28 0.06 frameshift_deletion,17_7574021_-_C,CN:2 4 PACA-CA DO221546 PCSI_0340 male deceased combined chemo+radiation therapy complete response 61 480 482 Smoking history not documented 54 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 15.79 PACA-CA::PCSI_0341 1 176726858 176828157 3 3 210 1 0 1 1 0 0.8 0.1 3 0 0 NA NA NA 23 5 7 76.79 96.11 0.92 0 4 2 Whitelist PACA-CA 0.87 0.26 0 0 0.84 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 2 137725827 143463895 6 6 210 3 1 1 1 0 0.57 0.08 5 0 0 5 3 5 21 7 7 76.79 65.55 34.35 20 6 5 Whitelist PACA-CA 0.68 0.23 0 0 0.64 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 3 2488925 135688492 1 4 210 1 3 0 0 0 0.11 0.01 5 0 0 5 3 5 8 4 4 76.79 52.6 44.36 0 4 2 Whitelist PACA-CA 0.54 0.06 0 0 0.48 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 4 15578989 19090938 3 3 210 0 1 1 1 0 0.8 0.1 6 0 0 6 6 6 11 7 7 76.79 97.07 0.42 1 2 4 Whitelist PACA-CA 0.87 0.26 0 0 0.84 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 5 129761280 141669356 3 3 210 0 1 1 1 0 0.8 0.09 3 0 0 NA NA NA 7 3 3 76.79 98.56 1.32 1 4 5 Whitelist PACA-CA 0.87 0.24 0 0 0.84 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 6 17057806 89560240 7 8 210 2 3 1 1 1 0.67 0.02 16 0 0 16 9 14 22 9 9 76.79 99.86 0 9 4 3 Whitelist PACA-CA 0.68 0.08 0 0 0.74 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 15 0.04 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 False positive; manually removed PACA-CA::PCSI_0341 7 82699649 83280655 3 3 210 0 1 1 1 0 0.8 0.17 3 0 0 NA NA NA 22 7 7 76.79 99.4 0.38 0 4 2 Whitelist PACA-CA 0.87 0.38 0 0 0.84 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 8 102615177 104841970 2 4 210 0 0 2 2 0 0.26 0.75 1 0 0 NA NA NA 6 3 4 76.79 67.14 29.34 4 4 NA Whitelist PACA-CA 0.62 0.92 0 0 0.59 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 9 21791384 24003472 11 11 210 4 1 3 3 0 0.63 0.01 3 0 0 NA NA NA 12 5 6 76.79 42.22 57.08 0 2 0 Whitelist PACA-CA 0.74 0.03 0 0 0.71 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 22 0.05 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 10 11367600 11386329 3 3 210 1 0 1 1 0 0.8 0.62 3 0 0 NA NA NA 13 5 6 76.79 99.49 0.22 0 4 5 Whitelist PACA-CA 0.87 0.83 0 0 0.84 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 11 32246556 84560749 1 4 210 2 2 0 0 0 0.26 0.74 5 0 0 5 3 5 5 3 3 76.79 99.44 0 0 4 3 Whitelist PACA-CA 0.62 0.91 0 0 0.59 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 12 108069410 108466454 2 2 210 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 14 4 7 76.79 52.89 47.09 4 2 1 Whitelist PACA-CA 0.68 0.27 0 0 0.64 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 13 78150192 90860229 1 4 210 1 3 0 0 0 0.11 0.34 5 0 0 5 3 5 5 3 3 76.79 85.73 0 0 4 3 Whitelist PACA-CA 0.54 0.59 0 0 0.48 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 14 32474088 32557573 1 1 210 0 1 0 0 0 0.39 0.43 2 0 NA NA NA NA 4 4 4 76.79 9.24 74.85 0 2 4 Whitelist PACA-CA 0.62 0.68 0 NA 0.59 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 15 41171274 81301983 1 4 210 1 2 0 0 1 0.3 0.67 4 0 0 4 3 4 6 3 3 76.79 84.59 0 0 4 3 Whitelist PACA-CA 0.68 0.87 0 0 0.59 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 16 65877829 65909830 3 3 210 2 1 0 0 0 0.3 0.01 5 0 0 5 3 5 13 5 7 76.79 86.78 0.02 1 4 1 Whitelist PACA-CA 0.62 0.06 0 0 0.59 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 17 34044687 73079768 1 5 210 0 5 0 0 0 0 0.83 6 0 0 6 6 6 8 7 7 76.79 83.42 16.58 0 4 6 Whitelist PACA-CA 0.1 0.97 0 0 0.07 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 18 48600134 51117807 2 2 210 0 0 1 1 0 0.57 0.67 2 0 0 NA NA NA 7 3 3 76.79 32.15 67.76 0 0 2 Whitelist PACA-CA 0.68 0.87 0 0 0.64 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 19 54957612 56927230 2 2 210 2 0 0 0 0 0.11 0.01 1 0 0 NA NA NA 12 4 4 76.79 92.41 0 0 5 NA Whitelist PACA-CA 0.54 0.04 0 0 0.48 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 20 NA NA 0 0 210 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 21 NA NA 0 0 210 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.58 0 NA NA 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 22 20803369 20920713 1 2 210 1 1 0 0 0 0.57 0.32 3 0 0 NA NA NA 5 5 5 76.79 76.22 0 0 4 7 Whitelist PACA-CA 0.68 0.57 0 0 0.64 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0341 X 2923488 48047848 1 2 210 0 2 0 0 0 0.11 0.01 1 0.32 0.04 NA NA NA NA NA NA 76.79 99.87 0 0 1 NA Whitelist PACA-CA 0.54 0.05 0.32 0.04 0.48 0 No PACA-CA PCSI_0341 PACA 0.52 3.57 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578260_T_C,CN:2 4 PACA-CA DO51507 PCSI_0341 male deceased combined chemo+radiation therapy complete response 73 2571 1735 Smoking history not documented 56 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 84.57 PACA-CA::PCSI_0345 1 39779752 80095796 6 6 92 0 1 3 2 0 0.34 0.44 11 0 0 11 3 8 12 4 6 24.06 9.93 90.07 5 2 3 Whitelist PACA-CA 0.62 0.69 0 0 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 12 0.07 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 2 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 3 NA NA 0 0 92 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.09 NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 4 171699957 172548479 1 1 92 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 24.06 0.44 99.34 0 1 2 Whitelist PACA-CA 0.62 0.08 NA NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 5 NA NA 0 0 92 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.11 NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 6 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 7 111133744 111161338 1 1 92 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 24.06 36.42 61.03 0 2 NA Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 8 51309933 137292850 29 40 92 6 9 6 8 11 0.82 0 9 0 0 9 9 9 11 10 10 24.06 37.6 58.81 12 2 3 Whitelist PACA-CA 19 0.81 0 0 0 0.86 1 High confidence PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA Canonical without polyploidization 69 0.38 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 9 21863399 22583880 1 1 92 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 3 3 24.06 25.8 74.03 0 0 1 Whitelist PACA-CA 0.62 1 0 NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 10 NA NA 0 0 92 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.33 NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 11 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 12 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 13 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 14 24535769 33783416 1 1 92 1 0 0 0 0 0.39 0.77 2 0 NA NA NA NA NA NA NA 24.06 8.61 90.47 0 1 2 Whitelist PACA-CA 0.62 0.93 0 NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 15 42232311 55609576 1 1 92 0 0 0 1 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 24.06 15.41 79.71 0 2 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 16 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 17 50902682 72348287 1 1 92 0 0 1 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 24.06 64.63 30.92 0 1 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 18 25683204 28915301 2 2 92 1 1 0 0 0 0.57 0.1 2 0 0 NA NA NA 6 6 6 24.06 67.77 26.38 0 1 2 Whitelist PACA-CA 0.68 0.27 0 0 0.64 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 4 0.02 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 19 21513068 58739452 11 24 92 1 1 5 4 13 0.2 0 17 0 0 17 6 8 24 10 15 24.06 76.98 15.56 10 3 2 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA With other complex events 35 0.19 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 20 NA NA 0 0 92 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 21 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 22 41865573 42104255 1 1 92 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 24.06 41.57 58.43 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 2 0.01 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0345 X NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0345 PACA 0.53 1.87 Panc-AdenoCA NA 0 0 stopgain,17_7578263_A_G,CN:1 2 PACA-CA DO51501 PCSI_0345 male deceased combined chemo+radiation therapy complete response 53 294 295 Smoking history not documented 39 yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0347 1 73507136 231782377 12 19 63 5 4 1 2 7 0.34 0 26 0 0 26 6 9 46 16 16 32.62 98.25 1.45 0 1 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA With other complex events 31 0.25 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 2 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 3 35655609 74830916 1 1 63 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 32.62 19.78 80.17 0 1 2 Whitelist PACA-CA 0.62 0.32 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 4 136195758 136210744 1 1 63 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.62 0.01 99.79 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 5 51129294 132639283 1 3 63 1 0 0 0 2 0.39 0.8 1 NA 0 NA NA NA NA NA NA 32.62 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.95 NA 0 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 6 27895848 140759914 1 9 63 4 0 0 0 5 0.01 0 7 0 0 7 4 6 8 4 6 32.62 0.75 99.01 0 1 2 Whitelist PACA-CA 0.48 0.02 0 0 0.16 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 13 0.1 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 7 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 8 102490388 102821916 1 1 63 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA 5 3 3 32.62 0.49 99.4 0 1 2 Whitelist PACA-CA 0.62 0.33 0 NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 9 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 10 77300282 77437362 1 1 63 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 32.62 0 99.93 0 2 NA Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 11 9906070 10323934 1 1 63 1 0 0 0 0 0.39 0.07 1 0 NA NA NA NA NA NA NA 32.62 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.21 0 NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 12 43766057 74670449 1 1 63 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 32.62 76.83 23.09 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 13 113468097 113544317 1 1 63 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 32.62 0 100 0 2 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 14 NA NA 0 0 63 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 15 NA NA 0 0 63 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 0 NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 16 15485288 15504634 1 1 63 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.62 0 99.89 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 17 NA NA 0 0 63 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.89 NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 18 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 19 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 20 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 21 NA NA 0 0 63 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 22 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0347 X 39892202 44935742 1 2 63 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 32.62 100 0 0 1 NA Whitelist PACA-CA 0.54 0.93 NA 0 0.48 0 No PACA-CA PCSI_0347 PACA NA NA Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO49442 PCSI_0347 male alive C25.0 chemotherapy complete response 57 1336 1336 Current reformed smoker, duration not specified 42 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 43.95 PACA-CA::PCSI_0348 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 9 21972128 22542603 1 1 20 1 0 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 12.97 0.4 99.4 0 0 2 Whitelist PACA-CA 0.62 0.78 NA NA 0.59 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 2 0.05 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 11 68352772 68374682 1 1 20 0 1 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 12.97 6.53 93.03 0 2 NA Whitelist PACA-CA 0.62 0.83 NA NA 0.59 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 2 0.05 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 14 62230155 105604930 5 6 20 2 2 1 0 1 0.53 0 1 0 0 NA NA NA NA NA NA 12.97 0 99.08 0 2 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 11 0.28 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 16 79060259 79231922 1 1 20 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 12.97 0.19 99.7 0 1 2 Whitelist PACA-CA 0.62 0.67 NA NA 0.59 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 2 0.05 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 18 1402794 25754644 6 6 20 4 0 0 2 0 0.06 0 10 0 0 10 3 6 18 5 7 12.97 88.11 11.85 4 2 3 Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 12 0.3 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 19 NA NA 0 0 20 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.18 NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0348 X 54171649 54206971 1 1 20 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.97 0 99.77 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0348 PACA 0.72 2.11 Panc-AdenoCA NA 2 0.05 NA 2 PACA-CA DO49445 PCSI_0348 female alive C25.0 chemotherapy complete response 60 1384 1384 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 45.53 PACA-CA::PCSI_0350 1 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 2 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 3 NA NA 0 0 100 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.16 NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 4 91505762 91797455 1 1 100 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 82.37 99.98 0 0 3 NA Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 5 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 6 162550457 163163531 1 2 100 2 0 0 0 0 0.11 0.13 4 NA 0 4 4 4 9 6 6 82.37 99.79 0.08 0 3 4 Whitelist PACA-CA 0.54 0.33 NA 0 0.48 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 7 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 8 NA NA 0 0 100 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.96 NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 9 2633689 22432256 2 4 100 1 0 1 0 2 0.57 0 3 0 0 NA NA NA 12 5 5 82.37 3.68 96.18 0 2 0 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 6 0.03 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 10 93600705 93916635 1 1 100 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 82.37 99.82 0 0 1 3 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 11 1086846 2954951 1 1 100 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 82.37 99.57 0 0 1 3 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 12 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 13 101814215 102402557 1 1 100 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 82.37 99.49 0.51 0 2 4 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 14 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 15 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 16 78124060 78162360 1 1 100 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 82.37 99.91 0 0 4 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 17 NA NA 0 0 100 0 0 0 0 0 NA 0.35 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.6 0 NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 18 31950397 68899945 40 40 100 9 12 10 9 0 0.9 0 25 0 0 25 7 13 39 10 14 82.37 94.66 0.02 0 1 3 Whitelist PACA-CA 0.93 0 0 0 0.92 1 High confidence PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA With other complex events 80 0.4 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 19 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 20 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 21 NA NA 0 0 100 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.12 NA NA NA 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 22 19346879 47234372 5 8 100 1 1 2 1 3 0.9 0 16 0 0 16 10 16 19 10 12 82.37 30.75 69.25 0 3 2 Whitelist PACA-CA 0.62 0 0 0 0.92 1 High confidence PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA Canonical without polyploidization 13 0.06 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0350 X 88216828 115398884 1 2 100 2 0 0 0 0 0.11 0.82 4 0 0 4 4 4 5 5 5 82.37 0.45 99.55 0 1 2 Whitelist PACA-CA 0.54 0.96 0 0 0.48 1 No PACA-CA PCSI_0350 PACA 0.99 3.25 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO49448 PCSI_0350 male deceased C25.0/C25.9 chemotherapy complete response 68 951 951 Current reformed smoker, duration not specified 13 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 31.28 PACA-CA::PCSI_0351 1 161283996 161404869 1 1 75 1 0 0 0 0 0.39 0.52 1 0 NA NA NA NA 6 3 4 63.76 99.94 0.06 0 5 NA Whitelist PACA-CA 0.62 0.76 0 NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 2 77782869 206523967 1 4 75 3 1 0 0 0 0.11 0.83 6 0 0 6 6 6 7 7 7 63.76 99.9 0 0 3 4 Whitelist PACA-CA 0.54 0.97 0 0 0.48 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 3 4509643 175557882 1 3 75 2 0 1 0 0 0.3 0.49 6 0.21 0 6 5 6 7 5 5 63.76 0.29 99.57 0 2 1 Whitelist PACA-CA 0.62 0.74 0.21 0 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 4 40669996 189308624 7 7 75 3 2 1 1 0 0.67 0.03 12 0 0 12 12 12 13 13 13 63.76 96.64 3.35 0 2 3 Whitelist PACA-CA 0.77 0.12 0 0 0.74 1 High confidence PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA Canonical without polyploidization 14 0.09 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 5 22227421 162202057 1 2 75 2 0 0 0 0 0.11 0.33 6 NA 0 6 6 6 7 7 7 63.76 42.33 54.99 0 2 3 Whitelist PACA-CA 0.54 0.58 NA 0 0.48 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 6 168788051 168804110 1 1 75 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 63.76 99.84 0.01 0 2 3 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 7 30174343 43608094 2 2 75 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 19 4 7 63.76 62.97 34.48 0 6 NA Whitelist PACA-CA 0.68 0.03 0 0 0.64 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 8 4796798 98136319 1 3 75 3 0 0 0 0 0.03 0.79 6 0.03 0 6 6 6 7 7 7 63.76 0.22 99.78 0 1 2 Whitelist PACA-CA 0.41 0.95 0.03 0 0.33 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 9 19995045 122893576 1 4 75 1 1 1 1 0 1 0.54 6 0 0 6 5 6 7 5 5 63.76 6.3 93.53 2 2 4 Whitelist PACA-CA 1 0.77 0 0 1 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 10 83978176 84032152 1 1 75 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 4 4 63.76 68.6 28.01 0 2 3 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 11 118676628 119390075 4 4 75 1 1 1 1 0 1 0.16 3 0 0 NA NA NA NA NA NA 63.76 99.25 0.19 0 3 2 Whitelist PACA-CA 1 0.37 0 0 1 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 12 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 13 100811484 100859950 1 1 75 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 63.76 100 0 0 3 4 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 14 68518704 68683643 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 63.76 0.15 98.93 0 1 2 Whitelist PACA-CA 0.62 0.91 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 15 94786159 94981396 1 1 75 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 5 3 3 63.76 99.88 0 0 1 3 Whitelist PACA-CA 0.62 0.71 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 16 63159814 79175016 1 2 75 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 63.76 99.41 0.27 0 3 2 Whitelist PACA-CA 0.68 1 NA 0 0.64 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 17 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 18 5451319 14569138 1 2 75 1 0 1 0 0 0.57 0.46 4 0 0 4 0 3 8 0 4 63.76 94.29 0 0 7 8 Whitelist PACA-CA 0.68 0.7 0 0 0.64 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 19 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 20 61479006 62426021 1 1 75 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 63.76 97.5 1.5 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 21 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 22 19185572 23101742 1 2 75 1 1 0 0 0 0.57 0.22 4 NA 0 4 3 4 6 3 3 63.76 44.3 55.7 0 3 2 Whitelist PACA-CA 0.68 0.46 NA 0 0.64 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0351 X 9210196 137451692 1 9 75 6 1 0 2 0 0.03 0 7 0 0 7 4 7 8 4 7 63.76 65.24 31.56 1 1 2 Whitelist PACA-CA 0.41 0.01 0 0 0.33 1 No PACA-CA PCSI_0351 PACA 0.98 2.9 Panc-AdenoCA NA 18 0.12 nonsynonymous_SNV,17_7574018_A_G,CN:2 3 PACA-CA DO49451 PCSI_0351 male alive C25.7 chemotherapy complete response 66 1131 1131 Current reformed smoker, duration not specified 60 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 37.2 PACA-CA::PCSI_0352 1 1719740 2269897 2 2 72 0 0 1 1 0 0.57 0.66 1 0 0 NA NA NA NA NA NA 25.27 17.4 82.6 0 2 NA Whitelist PACA-CA 0.68 0.87 0 0 0.64 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 4 0.03 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 2 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 3 67416886 87569033 1 5 72 1 0 1 1 2 0.8 0.03 8 0 0 8 8 8 14 13 13 25.27 41.03 55.89 0 1 2 Whitelist PACA-CA 0.93 0.12 0 0 0.84 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 8 0.06 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 4 9739351 9754835 1 1 72 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 25.27 0 99.98 0 2 NA Whitelist PACA-CA 0.62 0.48 NA NA 0.59 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 2 0.01 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 5 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 6 40037807 56846580 6 14 72 2 0 1 3 8 0.34 0 29 0 0 29 6 12 35 6 8 25.27 91.11 5.61 0 3 2 Whitelist PACA-CA 14 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA With other complex events 20 0.14 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 7 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 8 138074669 138128072 1 1 72 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 25.27 67.14 29.34 0 3 NA Whitelist PACA-CA 0.62 0.52 NA NA 0.59 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 2 0.01 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 9 20321756 22055379 1 1 72 1 0 0 0 0 0.39 0.76 2 0 NA NA NA NA 8 3 3 25.27 33.32 64.07 0 0 1 Whitelist PACA-CA 0.62 0.93 0 NA 0.59 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 2 0.01 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 10 NA NA 0 0 72 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 11 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 12 8817979 90124040 1 2 72 2 0 0 0 0 0.11 0.78 3 NA 0.02 NA NA NA 4 4 4 25.27 72.06 24.2 0 1 2 Whitelist PACA-CA 0.54 0.93 NA 0.03 0.48 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 4 0.03 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 13 NA NA 0 0 72 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 14 20953269 101623829 13 30 72 2 1 6 4 17 0.21 0 36 0 0 36 11 36 37 11 11 25.27 71.07 28.93 0 3 4 Whitelist PACA-CA 6_18 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA With other complex events 43 0.3 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 15 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 16 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 17 12040262 12058603 1 1 72 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.27 27.34 68.12 0 1 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 2 0.01 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 18 2451184 18686433 1 9 72 1 0 0 1 7 0.57 0 11 0 0 11 11 11 13 12 12 25.27 94.59 0 0 4 3 Whitelist PACA-CA 14 0.97 0 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA After polyploidization 11 0.08 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 19 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 20 NA NA 0 0 72 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.43 NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 21 26017548 29977023 2 2 72 0 0 1 1 0 0.57 0.22 4 NA 0 4 4 4 5 5 5 25.27 6.33 71.03 0 1 2 Whitelist PACA-CA 0.68 0.45 NA 0 0.64 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 4 0.03 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0352 X NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0352 PACA NA NA Panc-AdenoCA NA 0 0 NA 1 PACA-CA DO49454 PCSI_0352 female deceased C25.0 chemotherapy unknown 74 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0353 1 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 2 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 3 NA NA 0 0 105 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 4 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 5 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 6 31811163 53484589 17 17 105 3 2 6 6 0 0.39 0 17 0 0 17 5 17 26 9 9 83.27 15.96 83.87 0 3 4 Whitelist PACA-CA 0.62 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA With other complex events 34 0.16 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 7 NA NA 0 0 105 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 8 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 9 26507162 26639453 1 1 105 1 0 0 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 83.27 99.32 0 0 3 NA Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 10 122522389 124824812 1 1 105 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 83.27 94.39 5.5 0 4 NA Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 11 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 12 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 13 100146239 106903808 1 1 105 0 0 0 1 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 83.27 78.25 21.75 0 4 NA Whitelist PACA-CA 0.62 0.52 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 14 20259866 102375473 38 40 105 8 9 12 9 2 0.81 0 58 0 0 58 5 9 59 5 8 83.27 51.88 32.21 14 4 5 Whitelist PACA-CA 0.91 0 0 0 0.86 0 Low confidence PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA With other complex events 78 0.37 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 15 41177802 91407799 1 6 105 1 2 1 2 0 0.88 0.07 10 0 0 10 6 8 12 6 7 83.27 99.86 0 0 6 8 Whitelist PACA-CA 0.93 0.21 0 0 0.91 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 12 0.06 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 16 78574745 78721699 1 1 105 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 83.27 99.9 0 0 4 NA Whitelist PACA-CA 0.62 0.77 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 17 27932722 31733704 4 4 105 2 0 1 1 0 0.57 0 9 0 0 9 4 7 17 4 4 83.27 58.69 41.3 0 4 5 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 8 0.04 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 18 48598569 48926787 1 1 105 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 83.27 38.8 61.16 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 19 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 20 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 21 45098776 45157591 1 1 105 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 83.27 77.35 0 0 4 5 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 22 30490255 30760568 1 1 105 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 83.27 0.53 99.47 0 2 4 Whitelist PACA-CA 0.62 0.32 NA NA 0.59 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0353 X NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0353 PACA 0.95 3.75 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7577523_T_-,CN:2 4 PACA-CA DO49457 PCSI_0353 female alive C25.0 chemotherapy complete response 53 1242 1242 Current smoker (includes daily smokers non-daily/occasional smokers) 38 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 40.86 PACA-CA::PCSI_0354 1 28678692 169489560 1 4 73 2 1 1 0 0 0.57 0.83 5 0 0 5 5 5 5 5 5 21.22 0.29 99.71 0 2 1 Whitelist PACA-CA 0.68 0.97 0 0 0.64 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 2 NA NA 0 0 73 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.53 NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 3 179604145 179639269 1 1 73 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 21.22 0.02 99.95 0 2 3 Whitelist PACA-CA 0.62 0.48 NA NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 4 123690270 148915811 3 5 73 2 1 0 0 2 0.3 0 10 0 0 10 7 10 19 8 8 21.22 31.33 65.98 0 2 1 Whitelist PACA-CA 0.62 0 0 0 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 8 0.05 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 5 11752107 164221053 1 2 73 2 0 0 0 0 0.11 1 1 0.01 0 NA NA NA NA NA NA 21.22 0 99.86 0 2 NA Whitelist PACA-CA 0.54 1 0.01 0 0.48 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 6 89626679 161418406 2 4 73 1 1 0 0 2 0.57 0.04 4 0 0 4 4 4 10 7 7 21.22 61.8 38.06 0 1 2 Whitelist PACA-CA 22 1 0.14 0 0 0.64 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 7 NA NA 0 0 73 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.69 NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 8 126138069 131667875 1 5 73 1 0 2 1 1 0.57 0.1 9 0 0 9 4 8 11 4 4 21.22 89.95 10.04 3 3 4 Whitelist PACA-CA 0.62 0.27 0 0 0.64 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 9 0.06 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 9 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 10 888404 906225 1 1 73 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 21.22 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.51 NA NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 11 NA NA 0 0 73 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 12 1072947 1667105 1 1 73 0 1 0 0 0 0.39 1 2 0.01 NA NA NA NA NA NA NA 21.22 0.44 99.47 0 2 3 Whitelist PACA-CA 0.62 1 0.01 NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 13 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 14 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 15 NA NA 0 0 73 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 16 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 17 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 18 4121150 73576993 3 7 73 1 0 1 1 4 0.8 0 10 0 0 10 10 10 11 11 11 21.22 71.09 24.27 0 1 2 Whitelist PACA-CA 22 0.77 0 0 0 0.84 1 High confidence PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA Canonical without polyploidization 10 0.07 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 19 36272557 36285459 1 1 73 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 21.22 0 99.83 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 20 9124861 9291904 1 1 73 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 21.22 0.27 98.77 0 1 2 Whitelist PACA-CA 0.62 0.43 NA NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 21 NA NA 0 0 73 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 22 27238901 46022597 1 12 73 1 1 0 3 7 0.28 0 14 0 0 14 6 8 15 6 9 21.22 51.8 48.2 0 1 2 Whitelist PACA-CA 6 0.68 0 0 0 0.59 1 Linked to high confidence PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA With other complex events 17 0.12 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0354 X 133633337 135129047 1 1 73 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 21.22 0.96 98.6 0 2 4 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 1 No PACA-CA PCSI_0354 PACA 0.8 1.97 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51496 PCSI_0354 female deceased C25.0 no treatment 70 197 197 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.48 PACA-CA::PCSI_0355 1 31308014 244339214 1 4 43 1 1 0 1 1 0.8 0.39 7 0 0 7 4 7 7 4 4 27.53 55.02 44.98 0 1 2 Whitelist PACA-CA 0.68 0.63 0 0 0.84 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 7 0.08 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 2 241061389 241110603 1 1 43 0 1 0 0 0 0.39 1 1 0 0 NA NA NA NA NA NA 27.53 0 99.89 0 2 NA Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 3 43192936 65130472 5 5 43 1 0 2 2 0 0.53 0.01 8 0 0 8 8 8 12 10 10 27.53 30.83 69.16 0 1 2 Whitelist PACA-CA 0.68 0.04 0 0 0.64 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 10 0.12 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 4 NA NA 0 0 43 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 5 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 6 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 7 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 8 73670062 73713570 1 1 43 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA 6 4 4 27.53 81.02 18.98 0 3 NA Whitelist PACA-CA 0.62 0.08 0 NA 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 9 35171043 37089520 4 4 43 2 0 2 0 0 0.26 0.03 3 0 0 NA NA NA 6 0 0 27.53 46.94 52.88 0 3 5 Whitelist PACA-CA 0.62 0.1 0 0 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 8 0.09 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 10 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 11 108141975 108157996 1 1 43 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 27.53 0.01 99.56 0 2 3 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 12 NA NA 0 0 43 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 13 66530221 66556833 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.53 0.02 99.98 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 14 23577077 23725489 1 1 43 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 27.53 0.14 99.86 0 2 3 Whitelist PACA-CA 0.62 0.64 NA NA 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 15 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 16 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 17 NA NA 0 0 43 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 18 31700279 62952219 1 2 43 1 1 0 0 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 27.53 73.13 26.84 0 1 NA Whitelist PACA-CA 0.68 0.1 0 0 0.64 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 19 NA NA 0 0 43 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.43 NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 20 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 21 36138927 43718627 1 2 43 1 1 0 0 0 0.57 0.1 5 NA 0 5 5 5 6 6 6 27.53 20.34 57.02 0 3 2 Whitelist PACA-CA 0.68 0.26 NA 0 0.64 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 4 0.05 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 22 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0355 X 74928542 74956044 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.53 99.76 0.02 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0355 PACA 0.99 1.91 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO49460 PCSI_0355 female deceased C25.0 chemotherapy complete response 64 767 767 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.23 PACA-CA::PCSI_0356 1 4092439 238928356 1 2 228 2 0 0 0 0 0.11 0 5 0.05 0.01 5 4 5 5 4 5 79.93 97.03 0 0 3 4 Whitelist PACA-CA 0.54 0 0.05 0.01 0.48 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 2 68510884 68607963 1 1 228 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 6 6 6 79.93 99.9 0 0 3 4 Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 3 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 4 13322693 66719297 1 2 228 1 1 0 0 0 0.57 0 5 0 0 5 5 5 6 6 6 79.93 99.89 0 0 3 4 Whitelist PACA-CA 0.68 0.01 0 0 0.64 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 5 17858208 93253894 1 2 228 0 2 0 0 0 0.11 0 3 0.01 0 NA NA NA 4 3 3 79.93 97.31 0 0 4 5 Whitelist PACA-CA 0.54 0 0.01 0 0.48 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 6 31276717 69510235 1 8 228 2 1 1 1 3 0.9 0.78 9 0 0 9 4 4 9 4 4 79.93 99.85 0 0 3 4 Whitelist PACA-CA 12 1 0.94 0 0 0.92 1 Linked to low confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 13 0.03 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 7 113478879 113490274 1 1 228 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 79.93 99.76 0 0 4 NA Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 8 40478806 140298863 23 54 228 6 7 6 4 31 0.84 0 32 0 0 32 31 32 35 32 35 79.93 84.45 12.03 11 3 2 Whitelist PACA-CA 17 0.71 0 0 0 0.88 1 High confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA Canonical without polyploidization 77 0.17 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 9 21932012 23818883 1 1 228 1 0 0 0 0 0.39 0.23 2 0 NA NA NA NA 6 3 3 79.93 75.92 20.92 0 0 2 Whitelist PACA-CA 0.62 0.46 0 NA 0.59 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 10 NA NA 0 0 228 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 NA NA NA 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 11 323191 36726710 34 34 228 8 12 9 5 0 0.4 0 63 0 0 63 24 48 64 24 24 79.93 23.44 76.13 14 3 4 Whitelist PACA-CA 0.63 0 0 0 0.6 1 High confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 68 0.15 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 12 31165322 84134078 10 12 228 1 4 2 3 2 0.57 0.02 22 0 0 22 5 9 24 5 9 79.93 35.98 60.1 0 4 3 Whitelist PACA-CA 0.68 0.07 0 0 0.64 1 Low confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 22 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 13 77045532 77147189 1 1 228 0 1 0 0 0 0.39 0.1 2 0 NA NA NA NA 6 3 3 79.93 99.99 0.01 0 5 6 Whitelist PACA-CA 0.62 0.26 0 NA 0.59 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 14 21160419 49059860 1 2 228 2 0 0 0 0 0.11 0.05 3 NA 0 NA NA NA 5 3 3 79.93 96.27 0.03 0 3 2 Whitelist PACA-CA 0.54 0.17 NA 0 0.48 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 15 NA NA 0 0 228 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.09 NA NA NA 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 16 NA NA 0 0 228 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.13 NA NA NA 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 17 22238087 79107550 25 58 228 6 6 5 8 33 0.86 0 27 0 0 27 11 14 32 12 14 79.93 58.24 36.77 1 2 3 Whitelist PACA-CA 8 0.89 0 0 0 0.9 1 High confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 83 0.18 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 18 1947225 25427315 13 13 228 5 2 4 2 0 0.56 0 26 0 0 26 6 6 28 7 7 79.93 95.29 0 0 6 7 Whitelist PACA-CA 0.68 0 0 0 0.64 1 Low confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 26 0.06 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 19 1479829 49231324 1 6 228 2 0 1 1 2 0.57 0.47 9 0 0 9 4 5 10 4 5 79.93 66.9 24.58 0 3 4 Whitelist PACA-CA 0.62 0.71 0 0 0.64 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 20 1085070 13303854 4 6 228 0 1 1 2 2 0.57 0 4 0 0 4 3 4 15 5 5 79.93 8 84.9 0 4 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 21 23450133 28398822 3 7 228 0 0 2 1 4 0.3 0.01 9 0 0 9 3 5 10 3 5 79.93 36.36 41 0 5 7 Whitelist PACA-CA 0.77 0.04 0 0 0.59 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 22 NA NA 0 0 228 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0356 X 67836332 93762861 1 6 228 0 1 0 1 4 0.57 0.36 3 0 0 NA NA NA 7 4 4 79.93 59.19 37.42 0 2 3 Whitelist PACA-CA 12 0.62 0.62 0 0 0.64 1 Linked to low confidence PACA-CA PCSI_0356 PACA 0.77 3.33 Panc-AdenoCA With other complex events 8 0.02 nonsynonymous_SNV,17_7577548_T_C,CN:2 4 PACA-CA DO49463 PCSI_0356 female deceased C25.0 chemotherapy disease progression 78 730 730 Current reformed smoker, duration not specified 50 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.01 PACA-CA::PCSI_0375 1 19211529 19524879 1 1 32 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA 9 3 3 91.19 54.59 42.45 0 3 4 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 2 232416846 232670068 1 1 32 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 0 3 91.19 97.3 0 0 5 7 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 4 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 5 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 6 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 7 26637679 26785642 1 1 32 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 91.19 99.78 0 0 6 8 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 8 32160641 70087301 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 91.19 99.89 0 0 6 8 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 9 20412138 22224469 2 2 32 0 0 1 1 0 0.57 0.13 3 0 0 NA NA NA 7 3 3 91.19 97.49 0 0 3 0 Whitelist PACA-CA 0.68 0.32 0 0 0.64 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 4 0.06 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 11 57549925 57588083 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 91.19 99.57 0 0 1 4 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 12 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 14 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 15 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 16 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 17 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 19 2792845 58974327 11 11 32 2 5 2 2 0 0.48 0 9 0 0 9 7 8 12 7 7 91.19 99.55 0 0 6 7 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 22 0.34 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 False positive; manually removed PACA-CA::PCSI_0375 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 22 36750605 36856578 1 1 32 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 91.19 100 0 0 4 6 Whitelist PACA-CA 0.62 0.57 NA NA 0.59 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 2 0.03 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0375 X NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0375 PACA 0.82 5.12 Panc-AdenoCA NA 0 0 NA 6 PACA-CA DO49466 PCSI_0375 male deceased C25 chemotherapy unknown 79 312 312 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Social Drinker (> once a month, < once a week) Included Panc-AdenoCA PACA CA 1 10.26 PACA-CA::PCSI_0392 1 4838716 61957506 1 2 160 0 2 0 0 0 0.11 0 4 NA 0.03 4 3 4 8 3 6 87.66 97.02 0 0 3 4 Whitelist PACA-CA 0.54 0 NA 0.03 0.48 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 2 70060486 215836748 1 3 160 2 1 0 0 0 0.3 0 6 0 0 6 5 6 9 5 5 87.66 99.9 0 0 4 3 Whitelist PACA-CA 0.62 0.02 0 0 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 3 65929442 95869126 1 4 160 1 0 0 3 0 0.11 0.06 8 0 0 8 3 3 9 3 3 87.66 96.83 0 8 3 6 Whitelist PACA-CA 0.54 0.19 0 0 0.48 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 4 28543132 28624173 1 1 160 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 87.66 99.99 0 0 4 5 Whitelist PACA-CA 0.62 0 NA NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 5 163015527 163081338 1 1 160 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 87.66 97.32 0 0 3 4 Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 6 8838119 69082829 34 36 160 5 9 13 7 2 0.25 0 57 0 0 57 5 6 60 5 6 87.66 21.76 75.41 8 6 4 Whitelist PACA-CA 0.64 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA With other complex events 70 0.22 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 7 7511319 71370147 1 4 160 0 4 0 0 0 0.01 0.12 6 0 0 6 5 6 7 5 5 87.66 99.78 0 0 5 6 Whitelist PACA-CA 0.21 0.3 0 0 0.16 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 8 95993359 135574872 27 28 160 5 11 5 6 1 0.3 0 37 0 0 37 6 17 45 9 9 87.66 98.79 1.21 17 6 4 Whitelist PACA-CA 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA With other complex events 55 0.17 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 9 5611241 24221999 1 4 160 2 2 0 0 0 0.26 0.54 4 0 0 4 3 4 6 3 3 87.66 99.3 0 2 5 1 Whitelist PACA-CA 0.62 0.77 0 0 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 10 NA NA 0 0 160 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.5 NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 11 76735690 76874542 1 1 160 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 87.66 99.57 0 0 4 5 Whitelist PACA-CA 0.62 0.13 NA NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 12 7998293 127887019 9 10 160 4 2 2 1 1 0.55 0 11 0 0 11 9 11 11 9 9 87.66 99.92 0 0 5 4 Whitelist PACA-CA 0.86 0 0 0 0.64 1 High confidence PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA After polyploidization 19 0.06 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 13 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 14 75354244 75483501 1 1 160 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 87.66 99.09 0 0 4 5 Whitelist PACA-CA 0.62 0.2 NA NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 15 22659911 24001324 1 1 160 0 0 0 1 0 0.39 0.34 3 NA NA NA NA NA 5 3 3 87.66 79.43 15.79 0 3 2 Whitelist PACA-CA 0.62 0.59 NA NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 16 2241041 3086253 1 2 160 0 2 0 0 0 0.11 0.45 3 NA 0 NA NA NA NA NA NA 87.66 99.91 0 0 4 5 Whitelist PACA-CA 0.54 0.7 NA 0 0.48 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 17 28175503 28249976 1 1 160 0 1 0 0 0 0.39 0.63 2 0 NA NA NA NA 9 3 4 87.66 99.98 0 0 6 7 Whitelist PACA-CA 0.62 0.84 0 NA 0.59 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 18 20260488 25314382 13 13 160 1 3 5 4 0 0.44 0 15 0 0 15 4 7 24 4 9 87.66 28.01 67.35 4 4 6 Whitelist PACA-CA 0.68 0 0 0 0.64 1 Low confidence PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA With other complex events 26 0.08 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 19 4364014 12301951 1 2 160 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 87.66 49.52 50.31 0 3 NA Whitelist PACA-CA 0.54 0.93 NA 0 0.48 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 20 NA NA 0 0 160 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 21 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 22 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0392 X NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0392 PACA 0.99 3.89 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:4 4 PACA-CA DO51518 PCSI_0392 female deceased C25.7 no treatment 66 129 129 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 4.24 PACA-CA::PCSI_0403 1 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 2 200293295 200397064 1 1 115 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 13.98 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.01 NA NA 0.59 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 3 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 4 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 5 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 6 66333844 66578764 1 1 115 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 13.98 0.14 99.71 0 1 2 Whitelist PACA-CA 0.62 0.16 NA NA 0.59 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 7 34131057 34313641 1 1 115 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 13.98 0.11 99.66 0 1 2 Whitelist PACA-CA 0.62 0.09 NA NA 0.59 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 8 105771772 143311069 6 8 115 3 1 1 1 2 0.57 0.2 1 0 0 NA NA NA NA NA NA 13.98 0 99.99 0 2 NA Whitelist PACA-CA 12 0.62 0.42 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA With other complex events 14 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 9 21546475 22152461 1 1 115 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 5 5 13.98 0.47 98.83 0 1 2 Whitelist PACA-CA 0.62 0.34 NA NA 0.59 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 10 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 11 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 12 388638 75487543 59 61 115 17 14 9 19 2 0.28 0 41 0 0 41 21 34 41 21 21 13.98 62.1 37.82 23 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA With other complex events 120 0.52 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 13 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 14 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 15 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 16 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 17 25733074 70173103 25 27 115 8 7 7 3 2 0.5 0 14 0 0 14 11 14 15 12 12 13.98 58.43 37.14 4 2 1 Whitelist PACA-CA 0.67 0 0 0 0.64 1 High confidence PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA Canonical without polyploidization 52 0.23 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 18 7789159 33577547 1 3 115 0 1 0 0 2 0.39 0.01 2 0 0 NA NA NA 5 5 5 13.98 65.2 34.77 0 1 2 Whitelist PACA-CA 0.62 0.06 0 0 0.59 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 19 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 20 NA NA 0 0 115 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 21 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 22 NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0403 X NA NA 0 0 115 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0403 PACA 0.89 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO49478 PCSI_0403 male alive C25.0 chemotherapy complete response 81 926 926 Current reformed smoker, duration not specified 20 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 30.46 PACA-CA::PCSI_0404 1 52658120 52779719 1 1 30 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 65.09 100 0 0 3 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 2 0.03 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 2 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 3 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 4 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 5 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 6 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 9 35185639 35221947 1 1 30 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.09 74.39 24.94 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 2 0.03 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 10 31831039 36121871 1 3 30 0 0 2 1 0 0.3 0.16 4 0 0 4 0 3 6 0 0 65.09 3.23 96.58 0 2 4 Whitelist PACA-CA 0.62 0.36 0 0 0.59 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 6 0.1 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 11 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 12 53927377 70146133 1 4 30 1 2 0 1 0 0.57 0 13 0 0 13 3 3 14 3 4 65.09 52.12 47.8 0 2 1 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 8 0.13 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 14 23158759 47214024 2 2 30 0 1 1 0 0 0.57 0.07 4 0 0 4 0 3 5 0 0 65.09 84.08 0 0 3 4 Whitelist PACA-CA 0.68 0.2 0 0 0.64 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 4 0.07 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 15 NA NA 0 0 30 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.79 NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 17 43920989 68531093 6 6 30 3 1 1 1 0 0.57 0 11 0 0 11 3 4 12 3 4 65.09 4.09 95.91 7 2 4 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 12 0.2 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 18 21181970 40509284 1 2 30 2 0 0 0 0 0.11 0.05 3 0 0 NA NA NA 8 3 3 65.09 68.97 26.4 0 1 2 Whitelist PACA-CA 0.54 0.15 0 0 0.48 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 4 0.07 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 20 NA NA 0 0 30 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.72 NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0404 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0404 PACA 0.15 2.85 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7574004_A_-,CN:2 0 PACA-CA DO49481 PCSI_0404 male deceased C25.1 no treatment 64 383 383 Smoking history not documented NA no None Included Panc-AdenoCA PACA CA 1 12.6 PACA-CA::PCSI_0413 1 22838300 217053327 1 4 21 0 1 0 1 2 0.57 0 4 0 0 4 3 4 8 5 5 27.46 18.12 81.88 0 2 1 Whitelist PACA-CA 0.54 0 0 0 0.64 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 6 0.14 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 2 NA NA 0 0 21 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.66 NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 4 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 8 128131794 129726210 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 27.46 1.09 98.9 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 2 0.05 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 9 19457553 22097262 1 2 21 2 0 0 0 0 0.11 0.2 4 NA 0 4 3 4 5 3 3 27.46 1.87 98.02 0 1 0 Whitelist PACA-CA 0.54 0.42 NA 0 0.48 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 4 0.1 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 12 5072386 5114475 1 1 21 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 27.46 71.46 24.8 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 2 0.05 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 13 98861777 98976809 1 1 21 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 27.46 0.1 99.9 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 2 0.05 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 17 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 18 22182111 50192264 1 4 21 3 0 0 0 1 0.03 0 8 0 0 8 5 8 10 5 5 27.46 74.95 25.04 1 1 0 Whitelist PACA-CA 0.54 0 0 0 0.33 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 7 0.17 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0413 X NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0413 PACA 0.94 1.73 Panc-AdenoCA NA 0 0 stopgain,17_7579415_T_C,CN:1 1 PACA-CA DO49484 PCSI_0413 male alive C25 chemotherapy unknown 67 287 287 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.44 PACA-CA::PCSI_0450 1 68502052 68682676 1 1 80 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 29.76 0 100 0 2 NA Whitelist PACA-CA 0.62 0.08 NA NA 0.59 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 2 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 3 184647593 185307600 2 2 80 0 0 1 1 0 0.57 0.13 2 NA 0 NA NA NA 4 4 4 29.76 96.86 0 0 1 3 Whitelist PACA-CA 0.68 0.32 NA 0 0.64 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 4 NA NA 0 0 80 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.96 NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 5 93768431 166322284 1 1 80 0 0 1 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 29.76 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.19 NA NA 0.59 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 6 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 7 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 8 72024480 110453428 2 2 80 0 1 0 1 0 0.57 0.44 1 NA 0 NA NA NA NA NA NA 29.76 0 99.99 0 2 NA Whitelist PACA-CA 0.68 0.69 NA 0 0.64 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 9 8818173 132217227 2 5 80 1 1 1 1 1 1 0 30 0 0 30 18 30 32 18 18 29.76 77.45 21.91 14 1 2 Whitelist PACA-CA 0.93 0 0 0 1 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 9 0.06 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 10 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 11 NA NA 0 0 80 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 12 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 13 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 14 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 15 NA NA 0 0 80 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 16 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 17 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 18 22348354 24606853 1 1 80 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 29.76 69.94 30.02 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 19 34867315 47884220 20 25 80 8 2 7 3 5 0.16 0 37 0 0 37 4 6 39 4 6 29.76 37.94 61.88 6 1 3 Whitelist PACA-CA 0.68 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA With other complex events 45 0.28 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 20 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 21 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 22 NA NA 0 0 80 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0450 X 9534069 137725602 6 6 80 3 1 1 1 0 0.57 0.3 6 0 0 6 6 6 8 8 8 29.76 88.9 10.87 13 1 2 Whitelist PACA-CA 0.68 0.55 0 0 0.64 0 Low confidence PACA-CA PCSI_0450 PACA 0.95 1.78 Panc-AdenoCA Canonical without polyploidization 12 0.08 nonsynonymous_SNV,17_7578394_C_T,CN:1 2 PACA-CA DO51498 PCSI_0450 female deceased C25.0/C25.9 chemotherapy disease progression 40 294 294 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 9.67 PACA-CA::PCSI_0451 1 18353319 36334422 1 1 56 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 19.29 7.21 92.79 0 1 2 Whitelist PACA-CA 0.62 0.32 NA NA 0.59 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 2 NA NA 0 0 56 0 0 0 0 0 NA 0.63 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.84 0 NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 3 NA NA 0 0 56 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.69 NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 4 NA NA 0 0 56 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 5 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 6 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 7 NA NA 0 0 56 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 8 47674760 136141807 14 15 56 2 5 5 2 1 0.46 0 15 0 0 15 8 10 16 8 8 19.29 13.73 82.85 3 5 4 Whitelist PACA-CA 0.73 0 0 0 0.64 1 High confidence PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA With other complex events 29 0.26 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 9 NA NA 0 0 56 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 11 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 0 NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 10 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 11 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 12 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 13 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 14 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 15 83282754 83363682 1 1 56 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 19.29 0 100 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 16 NA NA 0 0 56 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.87 NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 17 40748986 74856095 9 9 56 3 2 1 3 0 0.75 0 9 0 0 9 3 7 12 3 4 19.29 67.03 27.68 2 3 5 Whitelist PACA-CA 0.85 0 0 0 0.83 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 18 0.16 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 18 6153318 21736786 5 5 56 1 0 2 2 0 0.53 0 10 0 0 10 3 7 13 4 4 19.29 78.86 16.41 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 10 0.09 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 19 15793361 23221101 1 2 56 0 1 0 1 0 0.57 0.3 2 NA 0 NA NA NA NA NA NA 19.29 60.73 39.1 0 2 3 Whitelist PACA-CA 0.68 0.55 NA 0 0.64 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 20 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 21 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 22 NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0451 X NA NA 0 0 56 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0451 PACA 0.99 1.86 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_C_G,CN:1 2 PACA-CA DO51537 PCSI_0451 male deceased C25.0 combined chemo+radiation therapy complete response 73 699 699 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.99 PACA-CA::PCSI_0453 1 78998612 79223808 1 1 102 1 0 0 0 0 0.39 0.58 2 0 NA NA NA NA 7 3 3 26.4 0.46 99.54 0 1 2 Whitelist PACA-CA 0.62 0.8 0 NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 2 105400813 162128611 1 2 102 2 0 0 0 0 0.11 0.72 4 0 0 4 4 4 5 5 5 26.4 0.43 99.47 0 1 2 Whitelist PACA-CA 0.54 0.9 0 0 0.48 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 3 NA NA 0 0 102 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.78 0 NA NA 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 4 175966013 175998095 1 1 102 1 0 0 0 0 0.39 0.32 1 0 NA NA NA NA NA NA NA 26.4 17.23 82.74 0 2 NA Whitelist PACA-CA 0.62 0.58 0 NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 5 11299550 143890322 1 4 102 4 0 0 0 0 0.01 0.54 4 0 0 4 4 4 7 5 5 26.4 0.88 99.1 0 1 2 Whitelist PACA-CA 0.21 0.77 0 0 0.16 0 Linked to low confidence PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA Canonical without polyploidization 8 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 6 120217602 120455597 3 3 102 1 0 1 1 0 0.8 0.21 2 0 0 NA NA NA 6 3 4 26.4 55.82 44.03 0 0 1 Whitelist PACA-CA 0.87 0.44 0 0 0.84 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 7 61536198 148841983 1 2 102 1 1 0 0 0 0.57 0.5 5 0 0 5 5 5 5 5 5 26.4 0.56 99.22 0 2 1 Whitelist PACA-CA 0.68 0.75 0 0 0.64 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 8 39633439 139926680 1 3 102 1 1 0 1 0 0.8 1 8 0 0 8 4 6 9 4 4 26.4 47.26 52.73 0 2 3 Whitelist PACA-CA 0.87 1 0 0 0.84 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 9 21737901 109603570 1 5 102 3 1 0 0 1 0.11 0.6 8 0 0 8 3 6 9 3 3 26.4 87.3 12.56 0 3 0 Whitelist PACA-CA 0.62 0.82 0 0 0.48 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 9 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 10 18841716 18853682 1 1 102 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 26.4 0 99.79 0 2 NA Whitelist PACA-CA 0.62 0.59 NA NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 11 15656240 91923937 1 2 102 1 1 0 0 0 0.57 0.34 4 NA 0 4 3 4 5 3 3 26.4 0.25 99.33 0 2 1 Whitelist PACA-CA 0.68 0.59 NA 0 0.64 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 12 30819443 32957312 2 3 102 1 0 0 1 1 0.57 1 5 0 0 5 5 5 6 6 6 26.4 23.52 72.49 0 2 1 Whitelist PACA-CA 0.62 1 0 0 0.64 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 13 89956500 89966656 1 1 102 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.4 11.49 88.51 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 14 42089278 79072071 1 3 102 1 0 1 1 0 0.8 0.04 3 0 0 NA NA NA 4 3 4 26.4 94.77 1.52 0 3 2 Whitelist PACA-CA 0.87 0.14 0 0 0.84 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 15 39600187 91122954 1 2 102 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 26.4 0.1 99.9 0 2 1 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 16 87402393 87417556 1 1 102 1 0 0 0 0 0.39 0.35 1 0 NA NA NA NA NA NA NA 26.4 0 99.89 0 2 NA Whitelist PACA-CA 0.62 0.61 0 NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 17 26321720 77389422 6 8 102 1 0 3 2 2 0.34 0 25 0 0 25 6 25 27 6 7 26.4 67.45 26.61 2 2 1 Whitelist PACA-CA 5 0.87 0 0 0 0.59 0 Low confidence PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA With other complex events 14 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 18 26394649 35654387 1 1 102 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 6 6 26.4 62.64 37.33 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 19 16899216 16915909 1 1 102 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 26.4 16.09 83.72 0 2 NA Whitelist PACA-CA 0.62 0.7 NA NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 20 55174050 55186248 1 1 102 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 26.4 0 98.93 0 2 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 21 27584204 38028460 1 2 102 1 1 0 0 0 0.57 0.36 4 NA 0 4 3 4 5 3 3 26.4 0.94 76.41 0 2 1 Whitelist PACA-CA 0.68 0.61 NA 0 0.64 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 22 NA NA 0 0 102 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0453 X 121350985 145570238 1 3 102 3 0 0 0 0 0.03 0.18 8 0 0 8 5 8 9 5 9 26.4 99.77 0.01 0 3 1 Whitelist PACA-CA 0.41 0.39 0 0 0.33 0 No PACA-CA PCSI_0453 PACA 0.99 1.96 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 PACA-CA DO51511 PCSI_0453 female deceased C25.0 chemotherapy complete response 67 688 688 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.63 PACA-CA::PCSI_0454 1 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 2 NA NA 0 0 28 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 3 187633169 187965782 1 1 28 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 90.75 99.95 0 0 3 5 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 2 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 5 65333838 110768135 1 2 28 0 0 1 1 0 0.57 0.69 1 NA 0 NA NA NA NA NA NA 90.75 99.86 0 0 3 NA Whitelist PACA-CA 0.68 0.89 NA 0 0.64 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 6 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 7 104262207 144206164 2 2 28 1 0 1 0 0 0.57 0.19 12 0 0 12 8 8 14 9 9 90.75 71.62 25.48 2 2 6 Whitelist PACA-CA 0.68 0.41 0 0 0.64 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 9 9300026 33003697 2 2 28 1 0 1 0 0 0.57 0.1 4 NA 0 4 0 3 5 0 3 90.75 90.57 8.73 0 0 1 Whitelist PACA-CA 0.68 0.26 NA 0 0.64 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 11 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 14 NA NA 0 0 28 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 17 44132603 63565836 1 3 28 3 0 0 0 0 0.03 0.01 6 0 0 6 6 6 8 8 8 90.75 60.92 34.65 0 2 4 Whitelist PACA-CA 0.41 0.03 0 0 0.33 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 6 0.11 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 18 19623830 19817661 2 2 28 0 1 0 1 0 0.57 0 1 0 0 NA NA NA 7 3 3 90.75 95.35 0 0 49 NA Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 4 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0454 X NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0454 PACA 0.17 3.42 Panc-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578272_A_G;17_7578273_A_C,CN:2 3 PACA-CA DO51546 PCSI_0454 female alive C25 no treatment 73 220 220 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 7.24 PACA-CA::PCSI_0456 1 63587278 210039868 1 3 99 2 0 0 1 0 0.3 0.45 8 0 0 8 4 6 10 5 5 85.36 97.01 0 0 4 3 Whitelist PACA-CA 0.62 0.7 0 0 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 2 237164460 239745632 1 1 99 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 85.36 99.9 0 0 3 4 Whitelist PACA-CA 0.62 0.2 NA NA 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 3 1785535 174865033 1 7 99 5 0 0 0 2 0 1 11 0 0 11 5 6 12 5 7 85.36 99.89 0.08 0 2 3 Whitelist PACA-CA 0.47 1 0 0 0.07 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 4 2015580 173527376 1 3 99 3 0 0 0 0 0.03 0.22 6 0 0 6 6 6 7 7 7 85.36 99.9 0 0 3 4 Whitelist PACA-CA 0.41 0.45 0 0 0.33 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 5 67575080 102525652 2 2 99 1 1 0 0 0 0.57 0.03 10 0 0 10 5 7 15 5 9 85.36 99.46 0.42 2 4 3 Whitelist PACA-CA 0.68 0.12 0 0 0.64 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 6 84345810 162795778 1 3 99 3 0 0 0 0 0.03 0.53 5 0 0 5 3 5 8 4 4 85.36 99.32 0.5 0 2 1 Whitelist PACA-CA 0.41 0.76 0 0 0.33 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 7 2160053 18604980 4 5 99 2 0 1 1 1 0.57 0 9 0 0 9 7 9 18 9 9 85.36 97.01 0.44 2 5 6 Whitelist PACA-CA 0.93 0.01 0 0 0.64 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 9 0.05 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 8 NA NA 0 0 99 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.49 NA NA NA 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 9 9062230 23887148 1 2 99 2 0 0 0 0 0.11 0.6 4 NA 0 4 3 4 5 3 5 85.36 99.33 0 0 3 0 Whitelist PACA-CA 0.54 0.81 NA 0 0.48 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 10 22169510 28626041 3 3 99 1 1 0 1 0 0.8 0.14 1 0 0 NA NA NA 8 5 6 85.36 98.81 1.01 0 4 NA Whitelist PACA-CA 0.87 0.34 0 0 0.84 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 11 48797286 49626788 1 1 99 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 85.36 98.96 0.61 0 2 3 Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 12 22680031 111630817 2 2 99 0 2 0 0 0 0.11 1 3 0 0 NA NA NA 8 8 8 85.36 96.26 0 0 4 3 Whitelist PACA-CA 0.54 1 0 0 0.48 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 13 52320363 112119399 1 5 99 2 0 1 2 0 0.53 0.4 9 0 0 9 6 8 10 6 8 85.36 99.9 0.1 0 5 4 Whitelist PACA-CA 0.68 0.64 0 0 0.64 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 10 0.05 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 14 66221133 66455013 1 1 99 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA 4 3 3 85.36 99.09 0 0 4 NA Whitelist PACA-CA 0.62 0.63 NA NA 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 15 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 16 60982398 79111064 1 2 99 2 0 0 0 0 0.11 0.34 2 0.01 0 NA NA NA 4 3 3 85.36 94.92 0.38 0 2 4 Whitelist PACA-CA 0.54 0.59 0.01 0 0.48 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 17 30607315 30695096 1 1 99 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA 9 3 5 85.36 76.51 23.47 0 2 3 Whitelist PACA-CA 0.62 0.6 NA NA 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 18 52279996 66883860 12 15 99 3 2 4 3 3 0.88 0 21 0 0 21 6 11 34 7 11 85.36 65.84 29.52 0 2 3 Whitelist PACA-CA 0.85 0 0 0 0.91 0 Low confidence PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA With other complex events 27 0.14 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 19 10842165 12563085 1 1 99 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 85.36 80.35 19.48 0 2 3 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 20 12029277 15013110 1 3 99 3 0 0 0 0 0.03 0.48 4 0 0 4 3 4 6 3 3 85.36 92.95 0 0 4 3 Whitelist PACA-CA 0.41 0.72 0 0 0.33 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 21 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 22 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0456 X 7102800 81331643 1 3 99 3 0 0 0 0 0.03 0.49 5 0.01 0 5 5 5 5 5 5 85.36 1.27 98.5 0 2 0 Whitelist PACA-CA 0.41 0.74 0.01 0 0.33 0 No PACA-CA PCSI_0456 PACA 0.8 3.6 Panc-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578535_C_T,CN:2 3 PACA-CA DO51542 PCSI_0456 female deceased C25.0 chemotherapy disease progression 54 369 369 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 12.14 PACA-CA::PCSI_0457 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 3 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 5 109058665 117356609 2 2 27 2 0 0 0 0 0.11 0 1 0 0 NA NA NA 10 9 9 23.06 9.81 90.08 0 2 NA Whitelist PACA-CA 0.54 0 0 0 0.48 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 4 0.07 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 6 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 9 21840818 22016555 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 23.06 42.81 54.68 0 0 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 10 NA NA 0 0 27 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.03 NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 11 2633623 4777419 1 2 27 1 0 0 0 1 0.39 0.36 2 NA NA NA NA NA NA NA NA 23.06 1.59 97.86 0 1 2 Whitelist PACA-CA 0.68 0.61 NA NA 0.59 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 3 0.06 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 13 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 14 NA NA 0 0 27 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 6 0 0 0 0 0 0 0 0 Whitelist PACA-CA NA 0.8 NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 15 86014838 98351012 2 4 27 1 1 0 0 2 0.57 0 6 0 0 6 4 6 11 7 7 23.06 34.07 50.39 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 6 0.11 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 17 57446725 57667217 1 1 27 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 23.06 21.38 78.61 0 2 NA Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 2 0.04 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 18 39178459 48575915 4 4 27 1 1 1 1 0 1 0.01 4 0 0 4 4 4 7 5 5 23.06 95.35 0 0 0 1 Whitelist PACA-CA 1 0.03 0 0 1 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 8 0.15 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0457 X NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0457 PACA 0.74 1.77 Panc-AdenoCA NA 0 0 stopgain;stopgain,17_7578188_A_C;17_7578189_T_A,CN:1 2 PACA-CA DO51513 PCSI_0457 female alive C25.0 chemotherapy complete response 85 769 769 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 25.3 PACA-CA::PCSI_0458 1 205733022 240669212 1 2 83 1 0 1 0 0 0.57 1 5 0 0 5 5 5 11 9 9 54.29 42.92 54.11 0 2 3 Whitelist PACA-CA 0.68 1 0 0 0.64 1 Linked to high confidence PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA Canonical without polyploidization 4 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 2 2888790 157310482 17 21 83 1 8 4 4 4 0.12 0 26 0 0 26 9 23 27 10 10 54.29 83.03 16.86 6 3 4 Whitelist PACA-CA 1 0.54 0 0 0 0.52 1 High confidence PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA With other complex events 38 0.23 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 3 15546912 175047774 1 9 83 6 0 0 1 2 0 0.02 15 0 0 15 7 7 15 7 7 54.29 19.84 77.08 3 2 1 Whitelist PACA-CA 0.41 0.07 0 0 0.09 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 16 0.1 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 4 91070402 91951568 2 2 83 2 0 0 0 0 0.11 1 4 0 0 4 3 4 6 3 3 54.29 35.78 64.21 0 1 0 Whitelist PACA-CA 0.54 1 0 0 0.48 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 5 21014048 21039050 1 1 83 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA 6 3 4 54.29 36.29 61.05 0 4 5 Whitelist PACA-CA 0.62 0.39 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 6 6076259 164132216 1 3 83 1 0 1 1 0 0.8 0.49 6 0 0 6 4 6 7 5 5 54.29 99.46 0.39 0 3 2 Whitelist PACA-CA 0.87 0.73 0 0 0.84 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 7 69922648 151272081 1 9 83 3 2 1 0 3 0.34 0.04 13 0 0 13 5 13 15 5 13 54.29 99.78 0 0 5 3 Whitelist PACA-CA 0.62 0.15 0 0 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 15 0.09 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 8 141870831 142371486 1 1 83 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 54.29 96.47 0 0 4 5 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 9 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 10 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 11 84202186 84530799 1 1 83 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 54.29 99.33 0.24 0 2 3 Whitelist PACA-CA 0.62 0.41 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 12 124270716 124331515 2 2 83 0 1 1 0 0 0.57 0.6 2 0 0 NA NA NA 7 4 4 54.29 0.68 99.24 0 1 4 Whitelist PACA-CA 0.68 0.81 0 0 0.64 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 13 104928971 105590427 1 1 83 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 54.29 99.43 0.57 0 2 3 Whitelist PACA-CA 0.62 0.63 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 14 81522227 81912749 1 1 83 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 4 3 3 54.29 95.93 0.36 0 2 3 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 15 NA NA 0 0 83 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 16 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 17 31317844 52932219 1 4 83 2 1 1 0 0 0.57 0.07 9 0 0 9 4 9 11 5 5 54.29 10.47 89.51 0 1 2 Whitelist PACA-CA 0.68 0.22 0 0 0.64 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 18 22461547 73541795 1 2 83 1 0 0 0 1 0.39 0.07 3 0 NA NA NA NA 9 3 3 54.29 49.98 45.39 7 1 2 Whitelist PACA-CA 0.54 0.21 0 NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 19 53775242 53815463 1 1 83 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 54.29 57.85 34.84 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 20 14657921 14971280 1 2 83 2 0 0 0 0 0.11 0.7 2 NA 0 NA NA NA NA NA NA 54.29 98.48 0.46 0 2 4 Whitelist PACA-CA 0.54 0.9 NA 0 0.48 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 21 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 22 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0458 X 125794423 126773497 3 3 83 2 1 0 0 0 0.3 0.01 1 0 0 NA NA NA 6 3 3 54.29 20.26 79.74 0 1 NA Whitelist PACA-CA 0.62 0.04 0 0 0.59 1 No PACA-CA PCSI_0458 PACA 0.44 2.75 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578457_G_C,CN:2 2 PACA-CA DO51491 PCSI_0458 male alive C25.0 chemotherapy complete response 83 988 988 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 32.5 PACA-CA::PCSI_0463 1 243119301 243601783 1 1 46 0 0 1 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 23.1 0 100 0 2 NA Whitelist PACA-CA 0.62 0.8 NA NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 2 235677051 235723568 1 1 46 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 23.1 0.02 99.88 0 1 2 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 3 60162255 60290207 2 2 46 1 0 1 0 0 0.57 0.14 2 0 0 NA NA NA 5 3 3 23.1 0.09 99.75 0 1 2 Whitelist PACA-CA 0.68 0.33 0 0 0.64 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 4 170059147 170103409 1 1 46 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 23.1 0 99.97 0 2 NA Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 5 NA NA 0 0 46 0 0 0 0 0 NA 0.76 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.93 0 NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 6 29266669 66956393 2 2 46 0 2 0 0 0 0.11 0.2 9 0 0 9 6 6 12 6 6 23.1 85.23 11.41 0 3 4 Whitelist PACA-CA 0.54 0.42 0 0 0.48 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 7 110825175 111016859 1 1 46 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 23.1 0 99.78 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 8 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 9 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 12 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 13 93295008 93312807 1 1 46 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.1 0.02 99.98 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 14 NA NA 0 0 46 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.18 0 NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 15 80934062 80959491 1 1 46 0 0 0 1 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 23.1 20.97 78.94 0 3 NA Whitelist PACA-CA 0.62 0.62 NA NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 18 39301844 42166183 4 4 46 1 1 0 2 0 0.57 0 8 0 0 8 4 6 9 4 4 23.1 49.66 50.3 0 3 4 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 8 0.09 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 19 NA NA 0 0 46 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 20 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 21 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 22 18597436 31905008 2 2 46 0 1 1 0 0 0.57 0.1 6 NA 0 6 4 6 6 4 4 23.1 48.92 51.08 0 2 3 Whitelist PACA-CA 0.68 0.27 NA 0 0.64 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 4 0.04 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0463 X 44692518 44744312 1 1 46 0 0 0 1 0 0.39 0.08 1 0 NA NA NA NA NA NA NA 23.1 100 0 0 1 NA Whitelist PACA-CA 0.62 0.23 0 NA 0.59 0 No PACA-CA PCSI_0463 PACA 0.33 1.88 Panc-AdenoCA NA 2 0.02 NA 2 PACA-CA DO51525 PCSI_0463 male deceased C25.0 chemotherapy complete response 38 690 690 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.7 PACA-CA::PCSI_0465 1 197074602 224201531 1 1 22 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 86.81 100 0 0 4 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 2 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 3 170700344 170755213 1 1 22 1 0 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 86.81 99.95 0 0 4 NA Whitelist PACA-CA 0.62 0.87 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 4 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 6 54213373 64552323 1 1 22 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA 5 3 3 86.81 38.42 61.3 0 4 6 Whitelist PACA-CA 0.62 0.34 0 NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 7 66015835 66053116 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 86.81 97.45 0 0 6 7 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 8 78107800 78124325 1 1 22 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 86.81 99.88 0 0 3 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 9 106106251 106121112 1 1 22 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 86.81 99.29 0.01 0 2 4 Whitelist PACA-CA 0.62 0.44 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 10 52738989 53026195 1 1 22 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 86.81 99.82 0 0 3 5 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 11 NA NA 0 0 22 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.52 NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 12 120418612 120432691 1 1 22 0 0 0 1 0 0.39 0.08 1 0 0 NA NA NA NA NA NA 86.81 99.92 0 0 4 NA Whitelist PACA-CA 0.62 0.23 0 0 0.59 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 18 2122071 5550933 1 3 22 0 1 0 1 1 0.57 0 1 0 0 NA NA NA NA NA NA 86.81 99.99 0 0 4 NA Whitelist PACA-CA 0.62 0.02 0 0 0.64 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 5 0.11 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 20 NA NA 0 0 22 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.23 NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0465 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0465 PACA 0.82 3.81 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577548_T_C,CN:4 4 PACA-CA DO51515 PCSI_0465 male alive C25.0 no treatment 73 1799 1799 Current reformed smoker, duration not specified 53 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 59.18 PACA-CA::PCSI_0468 1 15896175 186181985 1 3 105 0 2 0 0 1 0.11 0.36 6 0 0.01 6 3 6 8 3 4 84.46 100 0 0 4 5 Whitelist PACA-CA 0.62 0.61 0 0.01 0.48 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 5 0.02 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 2 215317872 215368600 1 1 105 0 1 0 0 0 0.39 0.22 2 0 NA NA NA NA NA NA NA 84.46 99.89 0 0 4 5 Whitelist PACA-CA 0.62 0.45 0 NA 0.59 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 3 43144023 45161947 2 2 105 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 11 9 9 84.46 99.95 0 0 4 3 Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 4 0.02 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 4 91114594 91340891 1 1 105 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 84.46 99.66 0.12 0 2 3 Whitelist PACA-CA 0.62 0.05 NA NA 0.59 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 5 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 6 NA NA 0 0 105 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.09 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 7 21621822 22177374 2 2 105 0 0 1 1 0 0.57 0.51 3 0 0 NA NA NA 5 5 5 84.46 99.55 0.22 0 4 2 Whitelist PACA-CA 0.68 0.76 0 0 0.64 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 4 0.02 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 8 6308120 10421841 4 4 105 3 1 0 0 0 0.11 0.5 10 0 0 10 4 5 16 4 4 84.46 49.13 50.86 0 0 4 Whitelist PACA-CA 0.54 0.74 0 0 0.48 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 8 0.04 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 9 5835505 36865594 8 19 105 2 1 2 3 11 0.8 0 12 0 0 12 5 12 14 5 14 84.46 73.84 25.46 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.84 0 Low confidence PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA With other complex events 27 0.13 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 10 36742971 36774671 1 1 105 0 0 1 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 84.46 99.89 0 0 4 NA Whitelist PACA-CA 0.62 0.26 NA NA 0.59 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 11 NA NA 0 0 105 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.85 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 12 NA NA 0 0 105 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.26 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 13 99074565 99223442 1 1 105 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 84.46 72.21 27.79 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 2 0.01 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 14 NA NA 0 0 105 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 15 NA NA 0 0 105 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 16 NA NA 0 0 105 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 17 43139776 48319596 2 2 105 1 1 0 0 0 0.57 0.02 5 0 0 5 5 5 13 6 7 84.46 6.49 93.5 0 2 5 Whitelist PACA-CA 0.68 0.09 0 0 0.64 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 4 0.02 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 18 18690328 27595848 25 25 105 2 2 13 8 0 0 0 34 0 0 34 7 7 34 7 7 84.46 10.88 84.48 17 8 5 Whitelist PACA-CA 0.16 0 0 0 0.12 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 50 0.24 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 19 NA NA 0 0 105 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 20 14987369 15255721 2 2 105 1 1 0 0 0 0.57 0.29 2 0 0 NA NA NA 5 3 3 84.46 98.92 0.11 0 4 5 Whitelist PACA-CA 0.68 0.54 0 0 0.64 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 4 0.02 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 21 NA NA 0 0 105 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 22 NA NA 0 0 105 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0468 X NA NA 0 0 105 0 0 0 0 0 NA 0.04 NA 0.05 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.15 0.05 NA NA 0 No PACA-CA PCSI_0468 PACA 0.79 3.59 Panc-AdenoCA NA 0 0 NA 4 PACA-CA DO51524 PCSI_0468 male alive C25.0 chemotherapy complete response 79 1251 1251 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 41.15 PACA-CA::PCSI_0469 1 18943855 36293967 1 2 61 2 0 0 0 0 0.11 0.24 2 NA 0 NA NA NA 5 3 3 15.4 7.03 92.97 0 1 2 Whitelist PACA-CA 0.54 0.47 NA 0 0.48 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 2 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 3 NA NA 0 0 61 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 4 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 5 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 6 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 7 99440746 103120677 2 2 61 1 0 0 1 0 0.57 0.02 6 0 0 6 3 3 12 4 4 15.4 42.3 57.47 3 5 1 Whitelist PACA-CA 0.68 0.07 0 0 0.64 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 8 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 9 21956617 22027853 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 15.4 27.53 71.77 0 0 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 10 85225342 87393028 2 3 61 0 0 1 1 1 0.57 0.02 2 0 0 NA NA NA 4 0 4 15.4 15.93 83.9 0 2 3 Whitelist PACA-CA 0.62 0.09 0 0 0.64 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 5 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 11 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 12 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 13 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 14 21422830 96805524 17 28 61 4 7 3 3 11 0.47 0 19 0 0 19 6 10 22 6 10 15.4 4.13 95.87 1 2 1 Whitelist PACA-CA 21 0.94 0 0 0 0.64 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 45 0.37 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 16 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 17 11906184 70600532 1 2 61 2 0 0 0 0 0.11 0.23 3 0 0 NA NA NA 4 3 3 15.4 27.34 68.22 0 0 1 Whitelist PACA-CA 0.54 0.46 0 0 0.48 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 18 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 19 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 20 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 21 21943611 41135819 1 15 61 0 0 2 1 12 0.3 0 5 0 0 5 5 5 6 5 5 15.4 22.95 54.41 1 2 3 Whitelist PACA-CA 14 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 18 0.15 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0469 X NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0469 PACA 0.78 1.97 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51497 PCSI_0469 female deceased C25.0/C25.9 no treatment 70 313 313 Current reformed smoker, duration not specified 2 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 10.3 PACA-CA::PCSI_0472 1 47634257 241880718 1 10 238 3 0 1 0 6 0.11 0.28 9 0 0 9 5 9 11 5 5 38.32 40.66 56.37 0 2 1 Whitelist PACA-CA 0.62 0.52 0 0 0.48 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 14 0.03 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 2 173364593 173376072 2 2 238 1 1 0 0 0 0.57 0.56 1 0 0 NA NA NA 10 7 7 38.32 33.93 65.95 0 3 NA Whitelist PACA-CA 0.68 0.78 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 3 13788797 189021715 12 18 238 2 4 4 2 6 0.72 0 20 0 0 20 5 9 22 5 7 38.32 56.14 40.71 6 2 1 Whitelist PACA-CA 10 0.87 0.01 0 0 0.8 1 Low confidence PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA With other complex events 30 0.06 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 4 NA NA 0 0 238 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0 NA NA NA 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 5 54722409 72195587 3 3 238 0 0 1 2 0 0.3 0.69 1 0 0 NA NA NA NA NA NA 38.32 71.85 25.45 0 1 NA Whitelist PACA-CA 0.62 0.89 0 0 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 6 5256354 160041545 1 12 238 3 1 1 2 5 0.67 0.59 3 0 0 NA NA NA 4 4 4 38.32 17.36 82.5 0 1 2 Whitelist PACA-CA 1 0.81 0 0 0.74 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 19 0.04 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 7 42578716 46358098 2 2 238 0 0 1 1 0 0.57 0.39 3 0 0 NA NA NA NA NA NA 38.32 2.37 97.4 1 2 1 Whitelist PACA-CA 0.68 0.63 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 8 3219482 23661048 1 1 238 1 0 0 0 0 0.39 0.46 2 0 NA NA NA NA 5 3 3 38.32 46.6 53.39 0 1 2 Whitelist PACA-CA 0.62 0.7 0 NA 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 9 16089509 124983667 1 6 238 2 1 0 0 3 0.3 0.87 4 0 0 4 3 4 4 3 3 38.32 22.61 77.24 0 2 1 Whitelist PACA-CA 0.68 1 0 0 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 9 0.02 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 10 28947349 34511968 12 12 238 2 3 3 4 0 0.88 0 18 0 0 18 13 18 28 16 16 38.32 31.51 68.32 0 1 2 Whitelist PACA-CA 0.93 0 0 0 0.91 1 High confidence PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA Canonical without polyploidization 24 0.05 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 11 41971409 77299047 1 4 238 1 1 0 0 2 0.57 0.22 1 0 0 NA NA NA NA NA NA 38.32 11.16 88.41 0 2 NA Whitelist PACA-CA 0.62 0.45 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 12 72776576 103871446 2 2 238 0 0 1 1 0 0.57 0.76 1 0 0 NA NA NA NA NA NA 38.32 0 99.92 0 2 NA Whitelist PACA-CA 0.68 0.92 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 13 52114185 73689508 5 5 238 1 1 1 2 0 0.9 0.21 3 0 0 NA NA NA 4 0 3 38.32 0.06 99.94 1 2 3 Whitelist PACA-CA 0.93 0.43 0 0 0.92 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 10 0.02 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 14 31200147 56485212 1 2 238 1 1 0 0 0 0.57 0.71 5 0 0 5 5 5 7 6 7 38.32 48.79 50.29 0 3 2 Whitelist PACA-CA 0.68 0.9 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 15 27116069 100368962 1 3 238 3 0 0 0 0 0.03 0.23 4 0 0 4 4 4 5 5 5 38.32 44.13 55.74 0 1 2 Whitelist PACA-CA 0.41 0.46 0 0 0.33 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 16 NA NA 0 0 238 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.77 NA NA NA 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 17 25515626 34850392 15 15 238 3 4 5 3 0 0.87 0 16 0 0 16 3 4 20 4 4 38.32 86.7 8.86 1 3 1 Whitelist PACA-CA 0.93 0 0 0 0.9 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 30 0.06 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 18 20819911 35839612 2 2 238 0 1 1 0 0 0.57 0.84 9 0 0 9 6 7 11 6 8 38.32 74.57 20.76 0 1 2 Whitelist PACA-CA 0.68 0.98 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 19 45908930 45938213 1 1 238 0 1 0 0 0 0.39 0.48 2 0 NA NA NA NA NA NA NA 38.32 0.05 99.78 0 2 3 Whitelist PACA-CA 0.62 0.72 0 NA 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 20 56495709 56517550 1 1 238 1 0 0 0 0 0.39 0.65 1 0 NA NA NA NA NA NA NA 38.32 0 99.03 0 2 NA Whitelist PACA-CA 0.62 0.86 0 NA 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 21 NA NA 0 0 238 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 22 27106392 38547160 1 7 238 1 1 0 0 5 0.57 0 4 0 0 4 3 4 6 4 4 38.32 11.69 88.31 0 2 1 Whitelist PACA-CA 0.96 0.01 0 0 0.64 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 9 0.02 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0472 X 56664582 56684570 1 1 238 1 0 0 0 0 0.39 0.3 1 0 NA NA NA NA NA NA NA 38.32 100 0 0 1 NA Whitelist PACA-CA 0.62 0.54 0 NA 0.59 1 No PACA-CA PCSI_0472 PACA 0.91 1.74 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221541 PCSI_0472 male deceased C25.0/C25.9 no treatment 75 195 195 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 6.41 PACA-CA::PCSI_0473 1 51596438 51606857 1 1 61 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 21.25 0 100 0 2 NA Whitelist PACA-CA 0.62 0.25 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 2 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 3 89818528 90251499 1 5 61 0 0 2 0 3 0.11 0.04 2 0 0 NA NA NA NA NA NA 21.25 44.34 52.58 9 1 2 Whitelist PACA-CA 0.62 0.13 0 0 0.48 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 4 161925597 162820636 1 1 61 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 21.25 0.47 99.51 0 1 2 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 5 162468602 162896050 1 1 61 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 21.25 0.24 99.64 0 1 2 Whitelist PACA-CA 0.62 0.4 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 6 36130410 92771456 13 13 61 3 2 4 4 0 0.84 0 21 0 0 21 7 11 32 18 18 21.25 81.39 15.68 5 2 3 Whitelist PACA-CA 0.9 0 0 0 0.88 1 High confidence PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA With other complex events 26 0.21 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 7 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 8 69860337 69942145 1 1 61 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 21.25 25.47 74.22 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 9 11531776 11604076 1 1 61 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 21.25 99.3 0 0 1 NA Whitelist PACA-CA 0.62 0.91 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 10 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 11 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 12 131321870 132679690 1 1 61 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 21.25 1.01 98.9 0 1 2 Whitelist PACA-CA 0.62 0.62 NA NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 13 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 14 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 16 4870100 22297039 5 5 61 1 0 3 1 0 0.28 0 11 0 0 11 5 10 15 5 6 21.25 45.4 50.08 0 3 2 Whitelist PACA-CA 0.62 0.01 0 0 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 10 0.08 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 17 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 18 28277484 34070781 4 5 61 3 0 1 0 1 0.11 0 8 0 0 8 8 8 15 15 15 21.25 57.87 42.09 0 1 2 Whitelist PACA-CA 0.45 0 0 0 0.48 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 9 0.07 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 19 57680083 57739444 1 2 61 0 0 1 0 1 0.39 0.01 2 0 NA NA NA NA 4 4 4 21.25 4.43 95.39 0 1 2 Whitelist PACA-CA 0.68 0.03 0 NA 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 20 NA NA 0 0 61 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 22 NA NA 0 0 61 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0473 X 66702348 67953682 1 6 61 0 1 0 0 5 0.39 0.03 1 0 0 NA NA NA NA NA NA 21.25 55.44 44.34 6 2 NA Whitelist PACA-CA 0.62 0.12 0 0 0.59 1 No PACA-CA PCSI_0473 PACA 0.55 1.87 Panc-AdenoCA NA 7 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 PACA-CA DO51532 PCSI_0473 female alive C25.0 chemotherapy complete response 59 1973 1973 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 64.9 PACA-CA::PCSI_0476 1 46749168 249168364 4 16 360 2 0 4 2 8 0.26 0 24 0 0 24 7 24 26 7 7 32.62 29.59 70.37 0 2 3 Whitelist PACA-CA 2_3_8 0.95 0.01 0 0 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 24 0.03 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 False positive; manually removed PACA-CA::PCSI_0476 2 10364315 230753567 1 23 360 2 7 0 0 14 0 0.34 17 0 0 17 5 17 22 6 8 32.62 72.27 27.62 0 3 2 Whitelist PACA-CA 17_4_8 0.44 0.59 0 0 0.08 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 32 0.04 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 3 30700450 193532542 1 15 360 5 3 0 0 7 0.03 0.47 15 0 0 15 6 15 17 6 6 32.62 39.17 60.7 0 2 1 Whitelist PACA-CA 0.41 0.71 0 0 0.33 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 23 0.03 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 4 154731494 158798243 2 2 360 0 0 1 1 0 0.57 0 4 0 0 4 4 4 23 7 7 32.62 17.31 82.48 0 3 4 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 5 15863495 107337886 1 5 360 2 1 0 0 2 0.3 0.06 7 0 0 7 5 7 7 5 5 32.62 0.1 99.76 0 2 3 Whitelist PACA-CA 0.62 0.2 0 0 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 8 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 6 3667787 144864178 1 16 360 3 4 0 0 9 0.06 1 18 0 0 18 7 18 18 7 7 32.62 22.86 77.01 1 2 1 Whitelist PACA-CA 4 0.41 1 0 0 0.48 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 23 0.03 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 7 105779418 113588842 1 3 360 0 0 1 2 0 0.3 0.35 3 0 0 NA NA NA 9 6 6 32.62 14.68 85.1 0 2 3 Whitelist PACA-CA 0.62 0.6 0 0 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 6 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 8 136426683 145091117 3 4 360 1 0 1 1 1 0.8 0.03 5 0 0 5 4 5 20 9 9 32.62 14.04 85.95 0 1 2 Whitelist PACA-CA 0.68 0.11 0 0 0.84 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 7 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 9 8625390 139468401 1 11 360 5 2 0 0 4 0.02 0.13 14 0 0 14 14 14 17 17 17 32.62 30.48 69.21 0 1 2 Whitelist PACA-CA 20 0.34 0.32 0 0 0.33 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 18 0.02 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 10 1104543 134154431 1 15 360 4 5 0 0 6 0.03 0.38 14 0 0 14 5 13 15 5 5 32.62 7.63 89.02 0 2 1 Whitelist PACA-CA 4 0.54 0.63 0 0 0.33 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 24 0.03 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 11 65204769 74477870 4 4 360 1 3 0 0 0 0.11 0.08 4 0 0 4 0 3 17 5 5 32.62 9.52 90.05 0 2 5 Whitelist PACA-CA 0.54 0.22 0 0 0.48 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 8 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 12 56422735 116730099 1 11 360 1 3 0 0 7 0.11 0.8 5 0 0 5 4 5 11 4 4 32.62 44.53 55.46 0 1 2 Whitelist PACA-CA 15_9 0.54 0.95 0 0 0.48 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 15 0.02 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 13 20058636 103938879 2 7 360 0 0 1 1 5 0.57 0.47 2 0 0 NA NA NA 4 3 3 32.62 32.29 67.71 0 2 3 Whitelist PACA-CA 4 0.54 0.71 0 0 0.64 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 9 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 14 36103152 81148762 1 6 360 2 1 0 0 3 0.3 0.55 8 0 0 8 3 5 8 3 5 32.62 35.46 63.63 0 1 2 Whitelist PACA-CA 17 0.93 0.77 0 0 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 9 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 15 31113616 89669218 1 9 360 2 2 0 0 5 0.26 1 8 0 0 8 5 8 8 5 5 32.62 64.57 35.43 0 2 1 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 13 0.02 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 16 51301444 56049671 2 2 360 0 0 1 1 0 0.57 0 3 0 0 NA NA NA 16 6 6 32.62 22.31 77.55 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 4 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 17 27499370 63215539 7 13 360 3 0 2 2 6 0.44 0 22 0 0 22 8 16 30 8 8 32.62 46.09 47.63 1 3 2 Whitelist PACA-CA 0.68 0 0 0 0.64 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 20 0.03 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 False positive; manually removed PACA-CA::PCSI_0476 18 13424030 77248643 1 6 360 1 3 0 0 2 0.11 0.62 8 0 0 8 5 8 11 5 5 32.62 65.75 33.15 0 2 1 Whitelist PACA-CA 20 0.68 0.84 0 0 0.48 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 10 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 19 1073097 19784699 1 8 360 0 5 0 0 3 0 0.01 9 0 0 9 9 9 13 13 13 32.62 0.37 99.46 0 2 3 Whitelist PACA-CA 8 0.28 0.03 0 0 0.07 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 13 0.02 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 20 2713045 43270608 1 12 360 1 5 0 0 6 0.01 0 15 0 0 15 9 15 16 9 9 32.62 55.04 43.99 0 3 4 Whitelist PACA-CA 9 0.62 0.02 0 0 0.19 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 18 0.02 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 21 32714411 32935589 1 1 360 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 32.62 20.59 47.77 0 1 2 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 2 0 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 22 NA NA 0 0 360 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0476 X 23810405 108004556 1 5 360 2 2 1 0 0 0.53 0.01 4 0 0 4 3 4 7 3 3 32.62 96.24 3.76 0 1 0 Whitelist PACA-CA 0.68 0.05 0 0 0.64 0 No PACA-CA PCSI_0476 PACA 0.89 1.88 Panc-AdenoCA NA 10 0.01 frameshift_deletion,17_7578475_-_G,CN:2 2 PACA-CA DO221544 PCSI_0476 male alive C25.0 chemotherapy complete response 42 755 755 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 24.84 PACA-CA::PCSI_0477 1 27079635 157734441 2 5 323 0 0 1 1 3 0.57 0.76 5 0 0 5 4 5 11 7 7 38.65 41.19 55.83 0 1 2 Whitelist PACA-CA 22 0.62 0.92 0 0 0.64 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 7 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 2 45422 204621489 3 14 323 3 2 0 1 8 0.34 0.02 16 0 0 16 7 9 18 7 9 38.65 37.29 62.62 1 2 3 Whitelist PACA-CA 17 0.81 0.08 0 0 0.59 1 High confidence PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA With other complex events 20 0.03 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 3 2293198 187254007 7 13 323 2 1 2 2 6 0.93 0.01 23 0 0 23 10 10 24 10 10 38.65 70.93 28.93 0 4 5 Whitelist PACA-CA 7 0.9 0.05 0 0 0.95 1 High confidence PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA With other complex events 20 0.03 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 4 7242168 188417998 1 11 323 6 1 0 0 4 0 0.82 11 0 0 11 10 11 12 10 10 38.65 37.92 62.06 0 1 2 Whitelist PACA-CA 0.41 0.96 0 0 0.09 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 18 0.03 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 5 106920024 126135309 1 3 323 3 0 0 0 0 0.03 0.42 3 0 0 NA NA NA 5 5 5 38.65 0.03 99.86 0 2 1 Whitelist PACA-CA 0.41 0.67 0 0 0.33 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 6 1918622 2194955 3 3 323 1 0 1 1 0 0.8 0.01 4 0 0 4 0 4 14 4 5 38.65 55.83 43.91 0 1 0 Whitelist PACA-CA 0.87 0.05 0 0 0.84 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 7 28529342 105022971 1 10 323 5 1 1 0 3 0.04 1 5 0 0 5 5 5 6 6 6 38.65 21.16 78.62 0 2 1 Whitelist PACA-CA 3 0.62 1 0 0 0.38 1 Linked to high confidence PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA Canonical without polyploidization 17 0.03 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 8 1965856 115852269 1 11 323 3 0 0 1 7 0.11 0.07 11 0 0 11 5 11 11 5 5 38.65 68.38 31.52 0 3 2 Whitelist PACA-CA 0.62 0.22 0 0 0.48 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 15 0.02 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 9 134282853 140365040 2 4 323 0 0 2 2 0 0.26 0.31 3 0 0 NA NA NA 10 8 8 38.65 22.02 74.92 0 2 1 Whitelist PACA-CA 0.62 0.57 0 0 0.59 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 8 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 10 89617269 89752305 2 2 323 0 0 1 1 0 0.57 0.79 1 0 0 NA NA NA 5 5 5 38.65 16.09 80.6 0 1 NA Whitelist PACA-CA 0.68 0.94 0 0 0.64 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 11 45603592 75013498 3 3 323 0 1 1 1 0 0.8 1 3 0 0 NA NA NA 7 6 6 38.65 33.45 66.15 0 2 1 Whitelist PACA-CA 0.87 1 0 0 0.84 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 12 12268145 98423132 1 4 323 4 0 0 0 0 0.01 0.51 1 0 0 NA NA NA NA NA NA 38.65 16.23 83.75 0 2 NA Whitelist PACA-CA 0.21 0.75 0 0 0.16 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 8 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 13 50600845 50655352 1 1 323 1 0 0 0 0 0.39 0.88 1 0 NA NA NA NA 4 4 4 38.65 45 54.21 0 2 NA Whitelist PACA-CA 0.62 1 0 NA 0.59 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 14 21698722 106358315 1 12 323 3 3 1 1 4 0.57 0.02 3 0 0 NA NA NA NA NA NA 38.65 0.05 99.03 0 2 3 Whitelist PACA-CA 8 0.68 0.09 0 0 0.64 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 20 0.03 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 15 45749342 67564838 1 2 323 1 0 1 0 0 0.57 0.49 1 0 0 NA NA NA NA NA NA 38.65 30.97 68.93 0 2 NA Whitelist PACA-CA 0.68 0.74 0 0 0.64 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 16 78815601 79023503 1 1 323 1 0 0 0 0 0.39 0.49 2 0 NA NA NA NA 8 3 3 38.65 67.8 32.17 0 0 1 Whitelist PACA-CA 0.62 0.73 0 NA 0.59 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 17 21709058 72004070 6 9 323 0 1 3 2 3 0.34 0 17 0 0 17 8 14 22 8 12 38.65 30.14 65.42 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 1 High confidence PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA With other complex events 15 0.02 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 18 18938407 37360262 1 2 323 2 0 0 0 0 0.11 0.3 1 0 0 NA NA NA NA NA NA 38.65 39.45 60.52 0 2 NA Whitelist PACA-CA 0.54 0.54 0 0 0.48 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 19 1108305 49517702 1 7 323 5 0 0 0 2 0 0 9 0 0 9 6 6 12 7 7 38.65 47.51 52.24 0 1 2 Whitelist PACA-CA 0.13 0.01 0 0 0.07 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 12 0.02 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 20 NA NA 0 0 323 0 0 0 0 0 NA 0.7 NA 0 NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.89 0 NA NA 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 21 14339255 14781743 1 1 323 1 0 0 0 0 0.39 0.61 1 0 NA NA NA NA NA NA NA 38.65 46.82 30.54 0 2 NA Whitelist PACA-CA 0.62 0.82 0 NA 0.59 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 22 28989657 42289711 1 3 323 3 0 0 0 0 0.03 0.02 5 0 0 5 5 5 5 5 5 38.65 1.05 98.23 0 2 1 Whitelist PACA-CA 0.41 0.07 0 0 0.33 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 6 0.01 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0477 X 138207540 138279062 1 1 323 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 38.65 100 0 0 1 NA Whitelist PACA-CA 0.62 0.01 0 NA 0.59 1 No PACA-CA PCSI_0477 PACA 0.86 1.86 Panc-AdenoCA NA 2 0 NA 2 PACA-CA DO221545 PCSI_0477 male alive C25.0 chemotherapy complete response 63 706 706 Current reformed smoker, duration not specified 24 Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 23.22 PACA-CA::PCSI_0492 1 153400305 198487493 1 2 73 0 0 2 0 0 0.11 0.51 1 0 0 NA NA NA NA NA NA 15.37 54.57 45.43 0 3 NA Whitelist PACA-CA 0.54 0.76 0 0 0.48 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 2 180340529 191355742 2 2 73 2 0 0 0 0 0.11 0.29 4 0 0 4 3 4 5 3 3 15.37 4.53 95.37 0 1 0 Whitelist PACA-CA 0.54 0.53 0 0 0.48 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 3 137408840 137455911 1 1 73 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 5 5 5 15.37 0.02 99.81 0 1 2 Whitelist PACA-CA 0.62 0.27 0 NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 4 10897628 30045745 1 1 73 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 15.37 10.02 89.97 0 1 2 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 5 67480865 104073703 1 1 73 1 0 0 0 0 0.39 1 2 0 0 NA NA NA NA NA NA 15.37 20.23 79.64 0 1 2 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 6 93959901 94530211 1 1 73 1 0 0 0 0 0.39 0.63 1 0 NA NA NA NA NA NA NA 15.37 0 99.86 0 2 NA Whitelist PACA-CA 0.62 0.84 0 NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 7 5107799 6125322 1 1 73 0 1 0 0 0 0.39 0.29 2 0 NA NA NA NA 9 7 7 15.37 0.65 99.11 0 2 3 Whitelist PACA-CA 0.62 0.53 0 NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 8 120734260 120808730 1 1 73 0 1 0 0 0 0.39 0.79 1 0 NA NA NA NA NA NA NA 15.37 0 99.99 0 2 NA Whitelist PACA-CA 0.62 0.94 0 NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 9 136670737 136865550 1 1 73 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.37 0.14 99.73 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 10 18580064 63342311 1 2 73 1 0 0 1 0 0.57 0.39 4 0 0 4 4 4 6 5 5 15.37 51.54 48.29 0 2 3 Whitelist PACA-CA 0.68 0.64 0 0 0.64 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 11 23272717 36811138 2 2 73 0 0 1 1 0 0.57 1 1 0.02 0 NA NA NA NA NA NA 15.37 0 99.44 1 2 NA Whitelist PACA-CA 0.68 1 0.02 0 0.64 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 4 0.03 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 12 NA NA 0 0 73 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 13 19803158 27141797 3 3 73 1 2 0 0 0 0.3 0 6 0 0 6 3 6 13 4 4 15.37 21.95 75.01 1 3 4 Whitelist PACA-CA 0.62 0.01 0 0 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 6 0.04 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 14 NA NA 0 0 73 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 15 63578989 99833009 1 1 73 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 15.37 35.36 64.64 0 2 3 Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 16 71541418 71551676 1 1 73 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 15.37 0 99.91 0 2 NA Whitelist PACA-CA 0.62 0.9 NA NA 0.59 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 17 NA NA 0 0 73 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.33 0 NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 18 NA NA 0 0 73 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 19 NA NA 0 0 73 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 20 NA NA 0 0 73 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 21 NA NA 0 0 73 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.46 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 22 NA NA 0 0 73 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.8 NA NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0492 X NA NA 0 0 73 0 0 0 0 0 NA 0.79 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.94 0 NA NA 0 No PACA-CA PCSI_0492 PACA 0.65 2.02 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51530 PCSI_0492 female deceased C25.0 no treatment 43 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 22.04 PACA-CA::PCSI_0504 1 8225255 230496437 1 7 81 4 1 0 0 2 0.04 0.14 6 0 0 6 6 6 9 7 7 24.37 8.81 91.19 0 1 2 Whitelist PACA-CA 0.62 0.34 0 0 0.36 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 12 0.07 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 2 108011173 108052133 2 2 81 0 0 1 1 0 0.57 0.11 3 0 0 NA NA NA 13 13 13 24.37 4.04 95.86 0 2 1 Whitelist PACA-CA 0.68 0.28 0 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 3 89991793 114547715 1 2 81 1 0 1 0 0 0.57 0.13 7 NA 0 7 4 5 7 4 5 24.37 47.83 49.02 0 2 1 Whitelist PACA-CA 0.68 0.32 NA 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 4 70736148 171977570 1 5 81 3 0 1 0 1 0.11 0.02 9 0 0 9 4 9 15 5 5 24.37 2.95 96.85 0 1 2 Whitelist PACA-CA 0.62 0.09 0 0 0.48 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 9 0.06 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 5 163358842 163540992 2 2 81 0 0 1 1 0 0.57 0.64 2 0 0 NA NA NA 9 9 9 24.37 2.72 97.14 0 1 2 Whitelist PACA-CA 0.68 0.85 0 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 6 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 7 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 8 131857333 132894921 2 2 81 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 12 4 6 24.37 98.89 1.11 0 1 3 Whitelist PACA-CA 0.68 0.04 0 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 9 8793920 9380124 2 2 81 1 1 0 0 0 0.57 0.56 4 0.16 0 4 3 4 9 5 5 24.37 1.22 98.62 0 2 0 Whitelist PACA-CA 0.68 0.79 0.16 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 10 86382716 108926101 1 1 81 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 24.37 16.63 83.19 0 1 2 Whitelist PACA-CA 0.62 0.81 NA NA 0.59 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 11 22656686 39025171 5 6 81 2 1 1 1 1 0.9 0 8 0 0 8 8 8 13 13 13 24.37 3.73 95.85 0 1 2 Whitelist PACA-CA 4 0.93 0.02 0 0 0.92 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 11 0.07 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 12 8980103 131350891 1 2 81 1 0 1 0 0 0.57 1 5 0 0.01 5 3 5 6 4 4 24.37 39.63 60.28 0 1 0 Whitelist PACA-CA 0.68 1 0 0.01 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 13 74983470 75217655 1 1 81 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 24.37 0.2 99.8 0 1 2 Whitelist PACA-CA 0.62 0.76 NA NA 0.59 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 14 27412601 36660400 2 2 81 1 1 0 0 0 0.57 1 3 NA 0 NA NA NA NA NA NA 24.37 0.02 99.06 0 2 3 Whitelist PACA-CA 0.68 1 NA 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 15 91855857 102420274 1 1 81 1 0 0 0 0 0.39 0.07 2 0 0 NA NA NA 5 5 5 24.37 1.14 98.75 0 1 2 Whitelist PACA-CA 0.62 0.22 0 0 0.59 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 16 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 17 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 18 34675073 36980677 1 2 81 0 1 1 0 0 0.57 0 5 0 0 5 5 5 8 6 6 24.37 56.05 43.91 0 1 2 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 19 30013506 30148161 2 2 81 0 0 1 1 0 0.57 0.08 3 0 0 NA NA NA 5 5 5 24.37 0.64 99.19 0 2 1 Whitelist PACA-CA 0.68 0.22 0 0 0.64 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 4 0.02 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 20 37593240 60420873 1 3 81 3 0 0 0 0 0.03 0.25 6 0 0 6 6 6 7 7 7 24.37 5.73 93.29 0 1 2 Whitelist PACA-CA 0.41 0.49 0 0 0.33 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 6 0.04 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 21 29854983 31328435 1 1 81 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.37 3.06 74.29 0 1 2 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 22 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 0 0 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0504 X 106705706 107343098 1 1 81 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 24.37 100 0 0 0 1 Whitelist PACA-CA 0.62 0.42 NA NA 0.59 0 No PACA-CA PCSI_0504 PACA 0.75 1.81 Panc-AdenoCA NA 2 0.01 frameshift_insertion,17_7572933_G_-,CN:1 2 PACA-CA DO51499 PCSI_0504 male deceased C25 chemotherapy stable disease 64 222 222 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.3 PACA-CA::PCSI_0506 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 2 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 4 60009703 60024734 1 1 12 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 24.62 0 99.82 0 2 NA Whitelist PACA-CA 0.62 0.79 NA NA 0.59 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 2 0.08 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 6 162693738 162805010 1 1 12 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 4 4 24.62 3.09 96.77 0 1 2 Whitelist PACA-CA 0.62 0.12 NA NA 0.59 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 2 0.08 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 7 NA NA 0 0 12 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.33 NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 13 NA NA 0 0 12 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.59 NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 14 32587700 33421442 1 1 12 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 4 0 4 24.62 28.34 67.95 0 0 2 Whitelist PACA-CA 0.62 0.57 NA NA 0.59 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 2 0.08 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 17 64710720 64771843 1 1 12 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA 4 4 4 24.62 27.4 68.15 0 1 2 Whitelist PACA-CA 0.62 0.52 NA NA 0.59 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 2 0.08 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 20 NA NA 0 0 12 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.46 NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 22 34060488 43101783 1 3 12 1 2 0 0 0 0.3 0 6 0 0 6 4 6 8 5 5 24.62 17.09 82.91 0 2 3 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 6 0.25 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0506 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0506 PACA 0.36 1.72 Panc-AdenoCA NA 0 0 stopgain,17_7579377_A_G,CN:1 1 PACA-CA DO51502 PCSI_0506 male deceased chemotherapy unknown 47 310 310 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 10.2 PACA-CA::PCSI_0508 1 NA NA 0 0 16 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 6 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 8 92454493 94024433 2 2 16 0 0 1 1 0 0.57 0.04 4 0 0 4 4 4 7 7 7 20.77 98.98 1.02 0 2 3 Whitelist PACA-CA 0.68 0.15 0 0 0.64 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 4 0.12 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 12 42488814 54957658 2 2 16 0 0 1 1 0 0.57 0.17 2 NA 0 NA NA NA NA NA NA 20.77 9.32 90.6 3 1 2 Whitelist PACA-CA 0.68 0.39 NA 0 0.64 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 4 0.12 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 13 72640628 72931866 1 2 16 0 0 1 1 0 0.57 0.1 1 NA 0 NA NA NA NA NA NA 20.77 0 100 0 2 NA Whitelist PACA-CA 0.68 0.27 NA 0 0.64 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 4 0.12 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 14 47941806 97683250 1 3 16 1 0 1 0 1 0.57 0 5 0 0 5 0 3 7 3 3 20.77 88.2 8.09 0 1 2 Whitelist PACA-CA 0.62 0.01 0 0 0.64 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 5 0.16 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 17 50860921 51209131 1 1 16 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA 4 4 4 20.77 26.91 67.8 0 1 2 Whitelist PACA-CA 0.62 0.61 NA NA 0.59 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 2 0.06 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 18 NA NA 0 0 16 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.2 NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0508 X NA NA 0 0 16 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.79 NA NA NA 0 No PACA-CA PCSI_0508 PACA 0.58 1.96 Panc-AdenoCA NA 0 0 stopgain,17_7576897_A_G,CN:1 2 PACA-CA DO51490 PCSI_0508 female deceased C25.1 no treatment 78 232 232 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 7.63 PACA-CA::PCSI_0509 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.52 NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 6 NA NA 0 0 4 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.45 NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 9 21778051 22156607 1 1 4 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 0.01 0.27 99.03 0 0 2 Whitelist PACA-CA 0.62 0.35 NA NA 0.59 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 2 0.25 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 10 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.05 NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0509 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0509 PACA 0.32 2 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO51549 PCSI_0509 female alive C25 combined chemo+radiation therapy complete response 76 229 229 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 7.53 PACA-CA::PCSI_0527 1 NA NA 0 0 53 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.32 NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 2 83466320 100424513 1 2 53 1 1 0 0 0 0.57 0.62 1 NA 0 NA NA NA NA NA NA 18.39 0 99.9 0 2 NA Whitelist PACA-CA 0.68 0.84 NA 0 0.64 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 3 NA NA 0 0 53 0 0 0 0 0 NA 0.27 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.51 0 NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 4 91113668 92409800 1 2 53 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 18.39 0.01 99.98 0 1 2 Whitelist PACA-CA 0.68 1 NA 0 0.64 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 5 NA NA 0 0 53 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.93 NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 6 156144115 156557562 1 2 53 0 1 0 0 1 0.39 1 1 NA NA NA NA NA NA NA NA 18.39 0 99.86 0 2 NA Whitelist PACA-CA 0.54 1 NA NA 0.59 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 3 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 7 NA NA 0 0 53 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.62 NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 8 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 9 20184925 22811379 1 1 53 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 3 18.39 16.46 83.37 0 0 1 Whitelist PACA-CA 0.62 1 NA NA 0.59 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 10 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 11 27539285 70354568 1 2 53 1 0 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 18.39 0 99.57 0 2 NA Whitelist PACA-CA 0.68 1 NA 0 0.64 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 12 16004740 48600593 17 22 53 3 6 3 5 5 0.66 0 20 0 0 20 7 7 21 7 7 18.39 96.2 0 1 3 1 Whitelist PACA-CA 0.89 0 0 0 0.74 1 High confidence PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA With other complex events 39 0.37 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 13 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 14 70463442 97414190 3 3 53 0 1 0 2 0 0.3 0 3 0 0 NA NA NA 10 5 5 18.39 15.31 83.78 0 2 1 Whitelist PACA-CA 0.62 0.01 0 0 0.59 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 6 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 15 NA NA 0 0 53 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.4 NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 16 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 17 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 18 15271599 61873551 4 4 53 2 1 1 0 0 0.57 0 9 0 0 9 9 9 14 10 10 18.39 50.02 45.34 0 1 2 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 8 0.08 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 19 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 20 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0527 X NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0527 PACA 0.52 1.9 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 3 PACA-CA DO221542 PCSI_0527 male alive combined chemo+radiation therapy complete response 60 375 375 Smoking history not documented NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 12.34 PACA-CA::PCSI_0528 1 NA NA 0 0 76 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 2 58142646 207869400 1 3 76 3 0 0 0 0 0.03 0.21 4 0 0 4 4 4 5 5 5 78.13 99.57 0.32 0 2 3 Whitelist PACA-CA 0.41 0.44 0 0 0.33 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 3 NA NA 0 0 76 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.2 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 4 NA NA 0 0 76 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 5 NA NA 0 0 76 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PACA-CA NA 0.48 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 6 67137218 142193135 1 2 76 1 0 0 1 0 0.57 0.63 4 0 0 4 3 4 6 4 4 78.13 38.16 61.6 0 2 1 Whitelist PACA-CA 0.68 0.84 0 0 0.64 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 7 87964359 118707429 1 2 76 2 0 0 0 0 0.11 0.44 4 NA 0 4 3 4 5 3 5 78.13 99.74 0.03 0 4 2 Whitelist PACA-CA 0.54 0.69 NA 0 0.48 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 8 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 9 20701354 22040203 1 1 76 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA 4 3 3 78.13 73.21 26.09 0 0 2 Whitelist PACA-CA 0.62 0.77 NA NA 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 10 83800527 83885953 1 1 76 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 9 4 5 78.13 74.44 21.52 0 2 4 Whitelist PACA-CA 0.62 0.09 0 NA 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 11 91057774 91376161 1 1 76 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 78.13 99.34 0.24 0 2 3 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 12 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 13 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 14 23598830 49140352 3 3 76 1 0 1 1 0 0.8 0.52 5 0 0 5 5 5 9 7 7 78.13 5.27 91.02 0 3 2 Whitelist PACA-CA 0.87 0.76 0 0 0.84 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 15 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 16 69748629 69802370 1 1 76 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 78.13 95.46 0 0 5 NA Whitelist PACA-CA 0.62 0.35 NA NA 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 17 63528018 67790466 24 24 76 9 5 5 5 0 0.57 0 14 0 0 14 4 7 19 4 7 78.13 55.49 40.08 0 3 1 Whitelist PACA-CA 0.68 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA With other complex events 48 0.32 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 18 21627557 49000261 1 2 76 1 0 0 1 0 0.57 0.02 6 0 0 6 3 3 10 3 3 78.13 28.33 71.63 2 2 0 Whitelist PACA-CA 0.68 0.07 0 0 0.64 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 19 4221890 4457201 1 2 76 0 0 0 1 1 0.39 0 3 0 0 NA NA NA 7 3 4 78.13 92.86 6.97 1 6 5 Whitelist PACA-CA 0.68 0.02 0 0 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 20 35666397 35798273 1 2 76 0 0 0 1 1 0.39 0.22 3 NA NA NA NA NA 7 7 7 78.13 99.02 0 0 5 4 Whitelist PACA-CA 0.68 0.46 NA NA 0.59 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 22 NA NA 0 0 76 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0528 X NA NA 0 0 76 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.41 NA NA NA 0 No PACA-CA PCSI_0528 PACA 0.52 3.06 Panc-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:2 3 PACA-CA DO221539 PCSI_0528 male alive combined chemo+radiation therapy complete response 49 1733 1733 Smoking history not documented 51 yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 57.01 PACA-CA::PCSI_0531 1 65453364 79372820 3 4 96 1 0 1 1 1 0.8 0 9 0 0 9 9 9 22 10 11 26.77 42.19 54.84 0 2 3 Whitelist PACA-CA 0.68 0 0 0 0.84 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 7 0.04 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 2 NA NA 0 0 96 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.02 0 NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 3 83834326 103326787 1 1 96 0 1 0 0 0 0.39 0.84 2 0 NA NA NA NA 4 4 4 26.77 68.58 31.36 0 1 2 Whitelist PACA-CA 0.62 0.98 0 NA 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 4 63420703 70515876 1 1 96 1 0 0 0 0 0.39 0.84 2 0.04 NA NA NA NA 6 6 6 26.77 67.59 29.85 0 1 2 Whitelist PACA-CA 0.62 0.97 0.04 NA 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 5 50151893 175993044 1 9 96 0 0 0 1 8 0.39 0.02 3 0 0 NA NA NA NA NA NA 26.77 72.84 24.48 0 1 2 Whitelist PACA-CA 0.41 0.08 0 0 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 10 0.05 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 6 NA NA 0 0 96 0 0 0 0 0 NA 0.52 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 0 NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 7 NA NA 0 0 96 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.08 0 NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 8 56961443 91478138 1 3 96 0 0 0 1 2 0.39 0.16 1 0 0 NA NA NA NA NA NA 26.77 23.88 76.11 0 2 NA Whitelist PACA-CA 0.87 0.36 0 0 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 9 26790881 33858672 1 2 96 1 0 0 1 0 0.57 0 2 0 0 NA NA NA NA NA NA 26.77 23.94 75.35 0 1 2 Whitelist PACA-CA 0.68 0.01 0 0 0.64 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 10 NA NA 0 0 96 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.84 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 11 18937071 74616081 1 3 96 0 0 1 0 2 0.39 0.81 1 0 0 NA NA NA NA NA NA 26.77 0.13 99.44 0 2 NA Whitelist PACA-CA 0.87 0.95 0 0 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 4 0.02 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 12 21191924 28029411 1 1 96 0 0 0 1 0 0.39 0.81 1 0 NA NA NA NA NA NA NA 26.77 0 99.92 0 2 NA Whitelist PACA-CA 0.62 0.95 0 NA 0.59 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 13 NA NA 0 0 96 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.64 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 14 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 15 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 16 NA NA 0 0 96 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 17 NA NA 0 0 96 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 18 9032446 50330464 8 11 96 3 3 1 1 3 0.57 0 17 0 0 17 6 8 18 6 8 26.77 90.87 4.48 1 1 2 Whitelist PACA-CA 0.87 0 0 0 0.64 0 Low confidence PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA With other complex events 19 0.1 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 19 NA NA 0 0 96 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 20 NA NA 0 0 96 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 21 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 22 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0531 X NA NA 0 0 96 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.36 0 NA NA 0 No PACA-CA PCSI_0531 PACA 0.31 1.86 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221543 PCSI_0531 male alive combined chemo+radiation therapy complete response 54 2045 2045 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 67.27 PACA-CA::PCSI_0537 1 42671142 75265537 1 2 55 1 1 0 0 0 0.57 0.62 4 0.03 0 4 3 4 8 4 4 70.01 48.32 48.55 0 2 1 Whitelist PACA-CA 0.68 0.83 0.03 0 0.64 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 4 0.04 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 2 188527520 211272213 1 1 55 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 70.01 99.9 0 0 3 4 Whitelist PACA-CA 0.62 0.24 NA NA 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 3 99971286 193783551 4 6 55 1 1 1 1 2 1 0 16 0 0 16 16 16 22 17 17 70.01 65.14 31.72 0 4 5 Whitelist PACA-CA 0.93 0.01 0 0 1 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 10 0.09 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 4 NA NA 0 0 55 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.81 NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 5 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 1 NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 6 27579504 27635046 1 1 55 0 1 0 0 0 0.39 0.57 2 0 NA NA NA NA 4 0 3 70.01 99.72 0 0 4 5 Whitelist PACA-CA 0.62 0.8 0 NA 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 7 NA NA 0 0 55 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.77 0 NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 8 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 9 NA NA 0 0 55 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.9 NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 10 1434904 53888958 3 3 55 1 1 1 0 0 0.8 0.32 8 0.26 0.07 8 6 8 10 7 10 70.01 79.59 17.01 1 2 3 Whitelist PACA-CA 0.87 0.57 0.26 0.07 0.84 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 6 0.05 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 11 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 12 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 13 36397602 36459496 1 1 55 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 70.01 100 0 0 5 6 Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 14 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 16 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 18 47988690 51752804 3 3 55 2 0 1 0 0 0.3 0 3 0 0 NA NA NA 14 5 5 70.01 86.91 7.88 0 1 0 Whitelist PACA-CA 0.62 0 0 0 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 6 0.05 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 19 38995048 39226694 1 1 55 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 13 3 3 70.01 60.6 32.13 1 18 23 Whitelist PACA-CA 0.62 0 0 NA 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 20 14971945 32751628 1 10 55 2 0 1 1 6 0.57 0 15 0 0 15 3 3 16 3 5 70.01 60.29 32.71 2 5 7 Whitelist PACA-CA 0.62 0 0 0 0.64 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 14 0.13 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 21 33382923 33408494 1 1 55 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 70.01 77.35 0 0 3 4 Whitelist PACA-CA 0.62 0.11 NA NA 0.59 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 2 0.02 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0537 X NA NA 0 0 55 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PACA-CA NA 0.76 NA NA NA 0 No PACA-CA PCSI_0537 PACA 0.65 3.12 Panc-AdenoCA NA 0 0 frameshift_deletion,17_7579442_-_GGTGTAGGAGCTGCTGGTGCAGG,CN:2 3 PACA-CA DO221540 PCSI_0537 male deceased combined chemo+radiation therapy complete response 56 290 290 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA yes Weekly Drinker (>=1x a week) Included Panc-AdenoCA PACA CA 1 9.54 PACA-CA::PCSI_0547 1 1741749 234844873 1 16 138 7 5 0 0 4 0.01 0.02 17 0 0 17 5 8 18 5 8 24.61 50.76 48.91 0 3 4 Whitelist PACA-CA 0.07 0.07 0 0 0.16 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 28 0.1 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 2 40967842 184852038 5 5 138 0 1 3 1 0 0.28 0.88 5 0 0 5 3 5 9 5 5 24.61 3.05 96.85 0 2 1 Whitelist PACA-CA 0.62 1 0 0 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 10 0.04 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 3 115275837 178239209 2 2 138 0 2 0 0 0 0.11 0.04 4 0 0 4 3 4 15 11 11 24.61 42.28 57.58 0 3 2 Whitelist PACA-CA 0.54 0.15 0 0 0.48 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 4 92928429 93001837 2 2 138 1 0 0 1 0 0.57 0.86 1 0 0 NA NA NA NA NA NA 24.61 0 99.89 0 2 NA Whitelist PACA-CA 0.68 1 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 5 39468857 63241748 2 2 138 1 1 0 0 0 0.57 0.38 3 0 0 NA NA NA 5 3 3 24.61 5.13 94.74 0 2 1 Whitelist PACA-CA 0.68 0.63 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 6 35117853 76402653 1 2 138 1 1 0 0 0 0.57 0.59 4 0 0 4 3 4 10 5 5 24.61 45.73 54.13 0 2 1 Whitelist PACA-CA 0.68 0.81 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 7 22772542 44882801 2 2 138 1 1 0 0 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 24.61 0 99.78 0 2 NA Whitelist PACA-CA 0.68 0.5 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 8 38812481 62719284 1 2 138 1 1 0 0 0 0.57 0.56 3 0 0 NA NA NA 6 4 4 24.61 30.33 69.67 0 2 3 Whitelist PACA-CA 0.68 0.79 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 9 21954896 132386663 1 4 138 1 1 0 0 2 0.57 0.26 11 0 0 11 4 10 13 5 5 24.61 50.67 46.78 0 2 1 Whitelist PACA-CA 0.62 0.51 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 6 0.02 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 10 80385097 90028589 2 2 138 0 0 1 1 0 0.57 0.3 2 0 0 NA NA NA 4 4 4 24.61 29.41 70.42 0 1 2 Whitelist PACA-CA 0.68 0.55 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 11 13061848 122082296 1 5 138 1 2 0 1 1 0.57 0.54 5 0 0 5 3 5 5 3 3 24.61 7.05 92.4 0 2 1 Whitelist PACA-CA 0.68 0.77 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 9 0.03 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 12 33227339 129623185 1 5 138 1 2 0 0 2 0.3 0.16 3 0 0 NA NA NA NA NA NA 24.61 0.02 99.9 0 2 1 Whitelist PACA-CA 0.62 0.36 0 0 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 8 0.03 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 13 76247773 99738751 1 5 138 1 1 0 0 3 0.57 0.06 6 0 0 6 4 6 9 5 5 24.61 12.74 87.26 0 2 3 Whitelist PACA-CA 0.62 0.18 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 7 0.03 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 14 63849466 69542703 1 1 138 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 4 4 4 24.61 22.18 76.9 0 1 2 Whitelist PACA-CA 0.62 1 0 NA 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 15 94880349 101080524 2 2 138 0 0 1 1 0 0.57 0.06 2 0 0 NA NA NA 6 6 6 24.61 17.57 82.43 0 2 3 Whitelist PACA-CA 0.68 0.19 0 0 0.64 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 16 568442 653447 1 1 138 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.61 24.45 75.46 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 17 48671589 49039977 1 2 138 0 2 0 0 0 0.11 0.79 1 0 0 NA NA NA NA NA NA 24.61 0 100 0 2 NA Whitelist PACA-CA 0.54 0.94 0 0 0.48 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 4 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 18 30586997 63594827 1 1 138 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 24.61 42.28 57.67 0 1 2 Whitelist PACA-CA 0.62 0.52 NA NA 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 19 592103 606387 1 1 138 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 24.61 0 99.83 0 2 NA Whitelist PACA-CA 0.62 1 NA NA 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 2 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 20 20261843 46628597 1 4 138 3 1 0 0 0 0.11 0.08 4 0 0 4 4 4 6 5 5 24.61 24.07 74.96 0 1 2 Whitelist PACA-CA 0.54 0.23 0 0 0.48 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 8 0.03 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 21 NA NA 0 0 138 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 22 25077615 46020670 1 2 138 0 0 0 1 1 0.39 0.08 2 NA NA NA NA NA NA NA NA 24.61 38.06 61.94 0 1 2 Whitelist PACA-CA 0.68 0.24 NA NA 0.59 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 3 0.01 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0547 X NA NA 0 0 138 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.58 NA NA NA 0 No PACA-CA PCSI_0547 PACA 0.62 1.94 Panc-AdenoCA NA 0 0 NA 2 PACA-CA DO221547 PCSI_0547 male alive C25.2 chemotherapy complete response 47 1338 1338 Smoking history not documented NA Don't know/Not sure Not Documented Included Panc-AdenoCA PACA CA 1 44.01 PACA-CA::PCSI_0572 1 107128798 114787742 6 10 86 2 3 0 1 4 0.34 0 5 0 0 5 5 5 12 6 10 43.25 52.91 44.12 0 5 2 Whitelist PACA-CA 2 0.62 0 0 0 0.59 1 Low confidence PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA With other complex events 16 0.09 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 2 21945480 110876001 9 24 86 3 6 0 0 15 0.01 0 24 0 0 24 8 13 26 8 14 43.25 65.98 31.33 6 2 4 Whitelist PACA-CA 1 0.41 0 0 0 0.21 1 High confidence PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA With other complex events 33 0.19 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 3 113624955 169118751 1 2 86 0 2 0 0 0 0.11 0.53 5 0 0 5 3 5 5 3 5 43.25 0.1 99.87 0 2 3 Whitelist PACA-CA 0.54 0.76 0 0 0.48 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 4 100807653 100920068 2 2 86 0 0 1 1 0 0.57 0.13 1 NA 0 NA NA NA NA NA NA 43.25 0 99.99 0 2 NA Whitelist PACA-CA 0.68 0.32 NA 0 0.64 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 5 151817381 164787042 1 2 86 1 1 0 0 0 0.57 0.18 4 NA 0 4 3 4 5 3 3 43.25 0.1 99.77 0 2 0 Whitelist PACA-CA 0.68 0.39 NA 0 0.64 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 6 170007509 170165155 1 1 86 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA 5 3 3 43.25 37.64 62.18 0 0 2 Whitelist PACA-CA 0.62 0.74 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 7 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 8 117747771 117758509 1 1 86 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 43.25 99.85 0 0 3 NA Whitelist PACA-CA 0.62 0.58 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 9 130583388 130657540 1 1 86 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 4 43.25 0.05 96.84 0 2 3 Whitelist PACA-CA 0.62 0.51 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 10 63684059 77514047 1 2 86 0 2 0 0 0 0.11 0.44 1 NA 0 NA NA NA NA NA NA 43.25 99.82 0 0 3 NA Whitelist PACA-CA 0.54 0.69 NA 0 0.48 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 11 85644607 85698231 1 1 86 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 5 5 5 43.25 99.44 0 0 3 4 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 12 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 13 NA NA 0 0 86 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.63 NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 14 34794098 102561659 1 3 86 0 3 0 0 0 0.03 0.05 5 0 0 5 0 3 8 3 5 43.25 7.04 77.05 0 2 3 Whitelist PACA-CA 0.41 0.17 0 0 0.33 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 6 0.03 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 15 59414499 67360813 1 2 86 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 43.25 0.48 99.52 0 1 2 Whitelist PACA-CA 0.54 1 NA 0 0.48 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 16 NA NA 0 0 86 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 17 38528313 73746755 1 2 86 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 5 43.25 99.98 0 0 3 4 Whitelist PACA-CA 0.54 1 NA 0 0.48 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 18 NA NA 0 0 86 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA 0.91 NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 19 22176305 22382007 2 2 86 1 1 0 0 0 0.57 0.01 1 0 0 NA NA NA NA NA NA 43.25 91.68 8.15 0 4 NA Whitelist PACA-CA 0.68 0.04 0 0 0.64 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 4 0.02 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 20 60870139 60996549 1 1 86 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA 4 4 4 43.25 99.02 0 0 3 5 Whitelist PACA-CA 0.62 0.69 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 21 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PACA-CA NA NA NA NA NA 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 0 0 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 22 38073255 38699640 6 6 86 1 3 1 1 0 0.57 0 4 0 0 4 0 3 6 3 3 43.25 100 0 0 4 6 Whitelist PACA-CA 0.68 0 0 0 0.64 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 12 0.07 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PACA-CA::PCSI_0572 X 140821838 140924949 1 1 86 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 43.25 0.07 99.93 0 1 2 Whitelist PACA-CA 0.62 0.33 NA NA 0.59 1 No PACA-CA PCSI_0572 PACA 0.49 2.71 Panc-AdenoCA NA 2 0.01 NA 3 PACA-CA DO51487 PCSI_0572 female alive combined chemo+radiation therapy complete response 69 2555 2555 Lifelong non-smoker (<100 cigarettes smoked in lifetime) NA no None Included Panc-AdenoCA PACA CA 1 84.05 PAEN-AU::ICGC_0425 1 NA NA 0 0 10 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.78 NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 6 29723414 29946701 1 1 10 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 11.59 0 99.85 0 2 NA Whitelist PAEN-AU 0.62 0.71 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 9 31217540 31620038 1 1 10 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 11.59 0 99.83 0 2 NA Whitelist PAEN-AU 0.62 0.58 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 10 49927753 124451893 1 1 10 1 0 0 0 0 0.39 0.01 4 NA NA 4 4 4 5 5 5 11.59 54.62 45.2 0 1 2 Whitelist PAEN-AU 0.62 0.04 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 11 56756822 57070869 1 1 10 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 11.59 99.21 0.23 0 1 2 Whitelist PAEN-AU 0.62 0.63 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 12 131711175 131923493 1 1 10 0 0 1 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 11.59 0.24 99.68 0 2 NA Whitelist PAEN-AU 0.62 0.04 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 14 106347883 106376907 1 1 10 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 11.59 0 99.09 0 2 NA Whitelist PAEN-AU 0.62 0.52 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0425 X 33495205 34150683 1 1 10 1 0 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 11.59 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.65 NA NA 0.59 0 No PAEN-AU ICGC_0425 PAEN 0.91 1.86 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46744 ICGC_0425 male alive C25.4 69 1916 1916 NA Included Panc-Endocrine PAEN AU 1 63.03 PAEN-AU::ICGC_0427 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 3 149523032 192154790 1 1 3 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 33.25 21.53 78.42 0 1 2 Whitelist PAEN-AU 0.62 0.42 NA NA 0.59 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 2 0.33 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 4 183023065 183531146 1 1 3 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 33.25 99.64 0.27 0 2 3 Whitelist PAEN-AU 0.62 0.41 NA NA 0.59 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 2 0.33 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 10 108386576 108499057 1 1 3 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 33.25 0.32 99.53 0 2 NA Whitelist PAEN-AU 0.62 0.32 NA NA 0.59 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 2 0.33 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0427 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0427 PAEN 0.95 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46745 ICGC_0427 male alive C25.4 48 1803 1803 NA Included Panc-Endocrine PAEN AU 1 59.31 PAEN-AU::ICGC_0428 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 4 182235691 182457042 1 1 5 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 50.74 0 99.79 0 2 NA Whitelist PAEN-AU 0.62 0.54 NA NA 0.59 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 5 NA NA 0 0 5 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.52 NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 18 51187943 52931168 1 1 5 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 50.74 2.23 97.73 0 2 3 Whitelist PAEN-AU 0.62 0.32 NA NA 0.59 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0428 X 31237720 33084163 1 2 5 1 1 0 0 0 0.57 0.02 2 NA 0 NA NA NA NA NA NA 50.74 99.92 0.08 0 1 2 Whitelist PAEN-AU 0.68 0.09 NA 0 0.64 0 No PAEN-AU ICGC_0428 PAEN 0.93 1.47 Panc-Endocrine NA 4 0.4 NA 2 PAEN-AU DO46747 ICGC_0428 male deceased C25.4 74 102 102 NA Included Panc-Endocrine PAEN AU 1 3.36 PAEN-AU::ICGC_0431 1 206839058 239207024 2 7 68 0 0 2 0 5 0.11 0 5 0 0 5 5 5 12 12 12 8.7 4.7 95.3 0 1 2 Whitelist PAEN-AU 3 0.62 0 0 0 0.48 1 Linked to high confidence PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine Canonical without polyploidization 9 0.07 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 2 39442101 65926165 1 5 68 1 0 0 0 4 0.39 0.83 6 0 0 6 6 6 7 7 7 8.7 5 94.91 0 1 2 Whitelist PAEN-AU 10 0.93 0.97 0 0 0.59 1 Linked to high confidence PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine Canonical without polyploidization 6 0.04 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 3 62648566 72500068 1 16 68 1 0 1 0 14 0.57 0 10 0 0 10 10 10 13 13 13 8.7 14.96 81.96 0 1 2 Whitelist PAEN-AU 1_10 0.79 0 0 0 0.64 1 Linked to high confidence PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine Canonical without polyploidization 18 0.13 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 4 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 5 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 6 NA NA 0 0 68 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 14 14 14 0 0 0 0 0 0 Whitelist PAEN-AU NA 0 0 NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 7 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 8 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 9 131383541 131592953 1 1 68 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 8.7 0.15 99.18 0 2 3 Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 10 4904254 111891388 3 32 68 1 2 0 0 29 0.3 0 17 0 0 17 17 17 19 19 19 8.7 21.75 74.89 0 1 2 Whitelist PAEN-AU 1_2 0.68 0 0 0 0.59 1 High confidence PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine Canonical without polyploidization 35 0.26 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 11 64386456 66199715 1 1 68 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 8.7 1.34 98.23 0 1 2 Whitelist PAEN-AU 0.62 0.63 NA NA 0.59 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 12 NA NA 0 0 68 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.63 NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 13 95839259 95868803 1 1 68 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 8.7 0.03 99.97 0 1 2 Whitelist PAEN-AU 0.62 0.91 NA NA 0.59 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 14 65968261 65981312 1 1 68 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 8.7 0 96.29 0 2 NA Whitelist PAEN-AU 0.62 0.9 NA NA 0.59 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 15 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 16 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 17 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 19 15567326 15585778 1 1 68 0 0 1 0 0 0.39 0.15 1 0 NA NA NA NA NA NA NA 8.7 0 99.83 0 2 NA Whitelist PAEN-AU 0.62 0.35 0 NA 0.59 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 20 NA NA 0 0 68 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.18 NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 21 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0431 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0431 PAEN 0.89 1.89 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46749 ICGC_0431 male alive C25.4 78 1379 1379 NA Included Panc-Endocrine PAEN AU 1 45.36 PAEN-AU::ICGC_0432 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 3 121579627 121631462 1 1 12 1 0 0 0 0 0.39 0.58 1 NA NA NA NA NA NA NA NA 54.69 99.95 0 0 1 NA Whitelist PAEN-AU 0.62 0.8 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 6 796729 957303 1 1 12 0 0 1 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 54.69 99.73 0 0 1 NA Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 7 NA NA 0 0 12 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.33 NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 9 21820251 22026732 1 2 12 2 0 0 0 0 0.11 0.08 1 NA 0 NA NA NA NA NA NA 54.69 0 99.86 0 2 NA Whitelist PAEN-AU 0.54 0.22 NA 0 0.48 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 4 0.17 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 12 128376018 128439659 1 1 12 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 54.69 0 99.98 0 2 NA Whitelist PAEN-AU 0.62 0.69 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 13 96530643 98987869 1 1 12 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 54.69 2.13 97.87 0 1 2 Whitelist PAEN-AU 0.62 0.59 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 17 NA NA 0 0 12 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.02 NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 19 47166131 56398368 1 1 12 0 0 1 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 54.69 0 99.83 0 2 NA Whitelist PAEN-AU 0.62 0.44 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 21 33983414 34202296 1 1 12 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 54.69 77.35 0 0 0 1 Whitelist PAEN-AU 0.62 0.33 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0432 X 32059648 33387229 1 1 12 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 54.69 100 0 0 0 1 Whitelist PAEN-AU 0.62 0.71 NA NA 0.59 0 No PAEN-AU ICGC_0432 PAEN 0.9 1.43 Panc-Endocrine NA 2 0.08 NA 2 PAEN-AU DO46751 ICGC_0432 male deceased C25.4 76 600 600 NA Included Panc-Endocrine PAEN AU 1 19.74 PAEN-AU::ICGC_0433 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 4 126425383 163689044 1 2 5 2 0 0 0 0 0.11 0.04 4 NA 0 4 4 4 5 5 5 40.82 99.9 0 0 3 4 Whitelist PAEN-AU 0.54 0.14 NA 0 0.48 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 4 0.4 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 6 77537573 114374027 1 1 5 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 40.82 0 99.85 0 2 NA Whitelist PAEN-AU 0.62 0.51 NA NA 0.59 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 2 0.2 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 9 81353520 105542839 1 1 5 0 0 0 1 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 40.82 0 99.86 0 2 NA Whitelist PAEN-AU 0.62 0.4 NA NA 0.59 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 2 0.2 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 10 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.44 NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0433 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0433 PAEN 0.66 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46753 ICGC_0433 female alive C25.4 59 1173 1173 NA Included Panc-Endocrine PAEN AU 1 38.59 PAEN-AU::ICGC_0434 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 4 NA NA 0 0 2 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.32 NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 8 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.26 NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 20 23686625 23749203 1 1 2 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 58.59 99.01 0 0 3 NA Whitelist PAEN-AU 0.62 0.15 NA NA 0.59 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 2 0.5 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0434 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0434 PAEN 0.86 2.66 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46755 ICGC_0434 male deceased C25.4 59 25 25 NA Included Panc-Endocrine PAEN AU 1 0.82 PAEN-AU::ICGC_0435 1 15889928 16179663 1 1 16 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 3 66.35 65.68 34.31 0 4 5 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 2 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 1 NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 3 15736898 16059112 1 1 16 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 66.35 0.16 99.67 0 1 2 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 4 183335576 184953361 1 1 16 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 66.35 99.97 0 0 4 5 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 7 NA NA 0 0 16 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.81 NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 8 85650708 91570380 1 2 16 0 2 0 0 0 0.11 0.19 2 NA 0 NA NA NA NA NA NA 66.35 99.99 0 0 4 6 Whitelist PAEN-AU 0.54 0.42 NA 0 0.48 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 4 0.12 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 9 NA NA 0 0 16 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.32 NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 11 25863669 27901496 1 1 16 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 66.35 1.51 98.06 0 2 4 Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 13 93851771 94696830 1 1 16 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 66.35 100 0 0 3 NA Whitelist PAEN-AU 0.62 0.27 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 14 103714766 103833275 1 1 16 0 1 0 0 0 0.39 0.4 2 NA NA NA NA NA 5 5 5 66.35 99.09 0 0 3 4 Whitelist PAEN-AU 0.62 0.65 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 16 71720609 71807128 1 1 16 0 1 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 66.35 0 99.91 0 2 NA Whitelist PAEN-AU 0.62 0.6 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 17 NA NA 0 0 16 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.61 NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 21 NA NA 0 0 16 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.4 NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0435 X 49795957 50257796 1 1 16 0 1 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 66.35 0 100 0 2 NA Whitelist PAEN-AU 0.62 0.79 NA NA 0.59 0 No PAEN-AU ICGC_0435 PAEN 0.6 3.25 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO46757 ICGC_0435 male alive C25.4 66 503 503 NA Included Panc-Endocrine PAEN AU 1 16.55 PAEN-AU::ICGC_0436 1 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 2 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 3 115242556 116049792 1 1 21 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 55.39 99.54 0.41 0 1 2 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 2 0.05 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 4 181256247 181307274 6 6 21 2 0 1 3 0 0.34 0 1 0 0 NA NA NA NA NA NA 55.39 5.18 94.8 0 1 NA Whitelist PAEN-AU 0.62 0 0 0 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 12 0.29 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 7 156660335 157578462 1 1 21 0 1 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 55.39 0.58 99.2 0 2 3 Whitelist PAEN-AU 0.62 0.56 NA NA 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 2 0.05 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 9 9411567 22175912 1 2 21 2 0 0 0 0 0.11 0.05 4 0.09 0 4 4 4 6 5 5 55.39 20.58 79.28 0 0 1 Whitelist PAEN-AU 0.54 0.16 0.09 0 0.48 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 4 0.1 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 10 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 12 7929408 39069634 1 2 21 0 1 1 0 0 0.57 0.26 1 NA 0 NA NA NA NA NA NA 55.39 0 99.98 0 2 NA Whitelist PAEN-AU 0.68 0.5 NA 0 0.64 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 4 0.1 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 16 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 17 17958734 18126651 1 1 21 1 0 0 0 0 0.39 0.11 2 NA NA NA NA NA 6 3 3 55.39 27.23 68.33 0 0 1 Whitelist PAEN-AU 0.62 0.28 NA NA 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 2 0.05 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 18 48434028 48739514 1 1 21 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 55.39 0 99.96 0 2 NA Whitelist PAEN-AU 0.62 0.68 NA NA 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 2 0.05 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 20 41741133 41992261 1 1 21 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 55.39 0.4 98.62 0 2 3 Whitelist PAEN-AU 0.62 0.22 NA NA 0.59 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 2 0.05 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 21 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0436 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0436 PAEN 0.77 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46759 ICGC_0436 male alive C25.4 61 903 903 NA Included Panc-Endocrine PAEN AU 1 29.7 PAEN-AU::ICGC_0437 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 8 136183539 145768572 1 1 4 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 59.76 96.17 0 0 6 7 Whitelist PAEN-AU 0.62 0.06 NA NA 0.59 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 2 0.25 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 19 NA NA 0 0 4 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.22 NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0437 X 32806708 33027519 1 1 4 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 59.76 99.78 0 0 0 1 Whitelist PAEN-AU 0.62 0.41 NA NA 0.59 0 No PAEN-AU ICGC_0437 PAEN 0.78 2.85 Panc-Endocrine NA 2 0.25 NA 4 PAEN-AU DO46761 ICGC_0437 female alive C25.4 67 764 764 NA Included Panc-Endocrine PAEN AU 1 25.13 PAEN-AU::ICGC_0438 1 76545390 93737638 2 2 11 0 0 1 1 0 0.57 0.01 3 0.01 0 NA NA NA 5 3 3 31.38 11.16 88.84 0 2 1 Whitelist PAEN-AU 0.68 0.04 0.01 0 0.64 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 4 0.18 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 2 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 4 182301733 182781164 1 1 11 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 31.38 0 99.98 0 2 NA Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 2 0.09 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 9 8492350 9481820 1 2 11 2 0 0 0 0 0.11 0.07 1 NA 0 NA NA NA NA NA NA 31.38 63.99 33.46 0 2 NA Whitelist PAEN-AU 0.54 0.2 NA 0 0.48 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 4 0.18 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 10 NA NA 0 0 11 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.25 NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 16 NA NA 0 0 11 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.5 NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 22 44678232 46322502 1 1 11 0 1 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 31.38 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.31 NA NA 0.59 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 2 0.09 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0438 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0438 PAEN 0.87 1.95 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46763 ICGC_0438 male alive C25.4 79 870 870 NA Included Panc-Endocrine PAEN AU 1 28.62 PAEN-AU::ICGC_0440 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 3 19458457 57564342 2 2 2 0 0 1 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 12.46 0 99.86 0 2 NA Whitelist PAEN-AU 0.68 0.03 NA 0 0.64 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 4 1 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0440 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0440 PAEN 0.82 2.1 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46767 ICGC_0440 female alive C25.4 65 608 608 NA Included Panc-Endocrine PAEN AU 1 20 PAEN-AU::ICGC_0441 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 4 NA NA 0 0 8 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.68 NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 8 10780940 58099961 4 4 8 1 1 1 1 0 1 0 6 0 0 6 6 6 7 7 7 79.78 97.43 2.46 0 2 4 Whitelist PAEN-AU 1 0 0 0 1 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 8 0.5 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 10 NA NA 0 0 8 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.16 NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 17 NA NA 0 0 8 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.01 NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0441 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0441 PAEN 0.93 3.97 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO46769 ICGC_0441 female alive C25.4 69 638 638 NA Included Panc-Endocrine PAEN AU 1 20.99 PAEN-AU::ICGC_0446 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 4 76349763 128183339 2 2 4 0 0 1 1 0 0.57 0 3 0 0 NA NA NA NA NA NA 49.64 99.95 0.03 0 3 2 Whitelist PAEN-AU 0.68 0.01 0 0 0.64 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 4 0.5 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 10 96957185 99460329 1 1 4 0 0 0 1 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 49.64 99.82 0 0 3 NA Whitelist PAEN-AU 0.62 0.39 NA NA 0.59 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 2 0.25 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0446 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0446 PAEN 0.61 2.45 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO46771 ICGC_0446 female alive C25.4 45 652 652 NA Included Panc-Endocrine PAEN AU 1 21.45 PAEN-AU::ICGC_0452 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 6 139391817 139586781 1 1 2 0 1 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 56.27 99.74 0.11 0 1 2 Whitelist PAEN-AU 0.62 0.3 NA NA 0.59 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 2 0.5 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 12 45272612 45442527 1 1 2 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 56.27 0 99.92 0 2 NA Whitelist PAEN-AU 0.62 0.25 NA NA 0.59 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 2 0.5 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0452 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0452 PAEN 0.52 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46779 ICGC_0452 male alive C25.4 77 437 437 NA Included Panc-Endocrine PAEN AU 1 14.38 PAEN-AU::ICGC_0453 1 144685902 144961011 1 1 5 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 26.18 0 100 0 2 NA Whitelist PAEN-AU 0.62 0.59 NA NA 0.59 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 2 213326645 213573572 1 1 5 0 1 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 26.18 0 99.91 0 2 NA Whitelist PAEN-AU 0.62 0.61 NA NA 0.59 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 7 145927068 145992814 1 1 5 0 0 1 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 26.18 0 99.77 0 2 NA Whitelist PAEN-AU 0.62 0.48 NA NA 0.59 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 8 143960021 143998158 1 1 5 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 26.18 0 99.99 0 2 NA Whitelist PAEN-AU 0.62 0.46 NA NA 0.59 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 16 25066180 25137509 1 1 5 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 26.18 0 99.89 0 2 NA Whitelist PAEN-AU 0.62 0.32 NA NA 0.59 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0453 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0453 PAEN 0.89 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46781 ICGC_0453 male alive C25.4 56 328 328 NA Included Panc-Endocrine PAEN AU 1 10.79 PAEN-AU::ICGC_0455 1 188073080 236635572 12 13 72 2 3 4 3 1 0.88 0 19 0 0 19 10 19 22 11 13 50.88 77.54 22.46 1 2 4 Whitelist PAEN-AU 0.9 0 0 0 0.91 1 High confidence PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine With other complex events 25 0.17 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 2 232156640 232574542 1 1 72 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 4 4 4 50.88 99.36 0.55 0 2 3 Whitelist PAEN-AU 0.62 0.97 0 NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 3 NA NA 0 0 72 0 0 0 0 0 NA 0.64 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.85 0.02 NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 4 34052570 151765849 1 2 72 1 1 0 0 0 0.57 0.63 4 0.01 0 4 3 4 5 3 3 50.88 0.29 99.61 0 2 0 Whitelist PAEN-AU 0.68 0.84 0.01 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 4 0.03 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 5 NA NA 0 0 72 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.58 NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 6 57816723 74678909 2 2 72 1 1 0 0 0 0.57 0.01 8 0 0 8 4 5 18 6 7 50.88 63.36 33.69 0 4 1 Whitelist PAEN-AU 0.68 0.05 0 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 4 0.03 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 7 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 8 100365034 113838795 1 4 72 1 0 1 0 2 0.57 0.1 6 0 0 6 6 6 11 8 11 50.88 38.24 61.75 0 3 4 Whitelist PAEN-AU 6 0.68 0.26 0 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 6 0.04 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 9 19512932 19842426 1 1 72 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 6 3 4 50.88 0.27 96.62 0 2 3 Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 10 83484463 115603236 1 2 72 1 1 0 0 0 0.57 0.77 4 NA 0 4 3 4 7 5 5 50.88 0.69 95.96 0 2 1 Whitelist PAEN-AU 0.68 0.93 NA 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 4 0.03 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 11 4742793 9080023 1 1 72 1 0 0 0 0 0.39 0.15 4 0.01 0 4 0 4 8 3 3 50.88 94.14 5.43 0 4 2 Whitelist PAEN-AU 0.62 0.35 0.01 0 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 12 NA NA 0 0 72 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.64 NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 13 78813773 78830763 2 2 72 0 0 1 1 0 0.57 0.04 4 0 0 4 4 4 8 4 4 50.88 31.56 68.44 0 2 4 Whitelist PAEN-AU 0.68 0.13 0 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 4 0.03 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 14 48787110 48919209 1 1 72 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 50.88 99.09 0 0 3 5 Whitelist PAEN-AU 0.62 0.91 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 15 61552608 80599801 1 2 72 1 0 0 1 0 0.57 1 4 NA 0 4 4 4 6 5 6 50.88 44.09 55.82 0 3 4 Whitelist PAEN-AU 0.68 1 NA 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 4 0.03 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 16 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 17 76309830 76322667 1 1 72 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 50.88 68.22 27.34 0 4 NA Whitelist PAEN-AU 0.62 0.9 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 18 32166208 32179127 1 1 72 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 50.88 99.95 0.02 0 2 4 Whitelist PAEN-AU 0.62 1 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 19 48245535 58689760 4 4 72 0 1 2 1 0 0.57 0 4 0 0 4 4 4 13 5 9 50.88 41.18 50.8 0 2 3 Whitelist PAEN-AU 0.68 0 0 0 0.64 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 8 0.06 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 20 15332632 15560363 1 1 72 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 3 3 50.88 93.64 0 0 1 4 Whitelist PAEN-AU 0.62 0.87 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 0 0 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0455 X 44791454 44898575 1 1 72 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 4 4 50.88 1.81 98.19 0 1 2 Whitelist PAEN-AU 0.62 0.51 NA NA 0.59 1 No PAEN-AU ICGC_0455 PAEN 0.86 2.78 Panc-Endocrine NA 2 0.01 stopgain,17_7578263_A_G,CN:2 2 PAEN-AU DO46783 ICGC_0455 male alive C25.4 78 350 350 NA Included Panc-Endocrine PAEN AU 1 11.51 PAEN-AU::ICGC_0456 1 2956275 3358898 1 1 10 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 25.07 0.16 99.83 0 1 2 Whitelist PAEN-AU 0.62 0.78 NA NA 0.59 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 4 170029949 170255653 1 1 10 0 1 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 25.07 0.12 99.64 0 2 3 Whitelist PAEN-AU 0.62 0.74 NA NA 0.59 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 5 72856560 72875426 1 1 10 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 3 3 25.07 24.52 75.35 0 1 2 Whitelist PAEN-AU 0.62 0.32 NA NA 0.59 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 7 NA NA 0 0 10 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.67 NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 8 144091216 144310982 1 1 10 0 1 0 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 25.07 99.99 0 0 1 NA Whitelist PAEN-AU 0.62 0.65 NA NA 0.59 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 10 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.63 NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 11 64559078 64704137 2 2 10 1 0 0 1 0 0.57 0.08 3 NA 0 NA NA NA 5 3 3 25.07 99.39 0.06 0 1 0 Whitelist PAEN-AU 0.68 0.22 NA 0 0.64 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 4 0.2 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 16 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.47 NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 19 37556330 37686647 1 1 10 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 25.07 0 99.83 0 2 NA Whitelist PAEN-AU 0.62 0.07 NA NA 0.59 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 2 0.1 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0456 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0456 PAEN 0.89 1.75 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO46785 ICGC_0456 male alive C25.4 59 392 392 NA Included Panc-Endocrine PAEN AU 1 12.89 PAEN-AU::ICGC_0457 1 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 2 108544255 203817368 1 21 59 1 0 1 1 18 0.8 0 13 0 0 13 5 6 16 5 6 60.13 99.87 0 0 6 7 Whitelist PAEN-AU 10 0.95 0 0 0 0.84 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 24 0.2 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 3 NA NA 0 0 59 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.01 0 NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 4 NA NA 0 0 59 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.07 0 NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 5 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 6 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 7 NA NA 0 0 59 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.63 NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 8 NA NA 0 0 59 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.31 0 NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 9 NA NA 0 0 59 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.91 NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 10 70337732 130767693 6 26 59 5 0 1 0 20 0.01 0 16 0 0 16 9 14 16 9 14 60.13 65.9 33.9 0 2 3 Whitelist PAEN-AU 2 0.75 0 0 0 0.19 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 32 0.27 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 11 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 1 NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 12 130494807 131021153 1 1 59 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 60.13 0.39 99.52 0 0 2 Whitelist PAEN-AU 0.62 0.18 NA NA 0.59 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 2 0.02 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 15 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 1 NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 16 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 17 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 20 38002347 39519350 1 1 59 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 60.13 96.6 2.41 0 2 4 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 2 0.02 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 21 NA NA 0 0 59 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.76 NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 22 28283864 29687347 1 2 59 1 0 0 0 1 0.39 0.03 3 NA NA NA NA NA NA NA NA 60.13 0.01 99.99 0 2 0 Whitelist PAEN-AU 0.68 0.12 NA NA 0.59 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 3 0.03 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0457 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0457 PAEN 0.29 3.51 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48539 ICGC_0457 male deceased C25.4 38 209 209 NA Included Panc-Endocrine PAEN AU 1 6.88 PAEN-AU::ICGC_0459 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 6 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.19 NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0459 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0459 PAEN 0.83 2.62 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO48545 ICGC_0459 male alive C25.4 56 370 370 NA Included Panc-Endocrine PAEN AU 1 12.17 PAEN-AU::ICGC_0489 1 213525344 232132566 1 1 6 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 25.69 0 100 0 2 NA Whitelist PAEN-AU 0.62 0.63 NA NA 0.59 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 2 0.17 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 5 NA NA 0 0 6 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.57 NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 7 NA NA 0 0 6 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.53 NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 9 10065625 10542882 1 1 6 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 25.69 0 99.32 0 2 NA Whitelist PAEN-AU 0.62 0.01 0 NA 0.59 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 2 0.17 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0489 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0489 PAEN 0.76 1.77 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48541 ICGC_0489 male alive C25.4 68 429 429 NA Included Panc-Endocrine PAEN AU 1 14.11 PAEN-AU::ICGC_0497 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 7 112830068 126560110 2 2 7 1 0 1 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 60.47 0 99.77 0 2 NA Whitelist PAEN-AU 0.68 0 0 0 0.64 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 4 0.29 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 9 10266026 112654681 1 2 7 2 0 0 0 0 0.11 0.03 5 NA 0 5 3 5 6 3 6 60.47 17.94 79.54 0 2 1 Whitelist PAEN-AU 0.54 0.11 NA 0 0.48 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 4 0.29 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 11 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.53 NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 12 NA NA 0 0 7 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.53 NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0497 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0497 PAEN 0.98 1.36 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48573 ICGC_0497 male alive C25.4 71 242 242 NA Included Panc-Endocrine PAEN AU 1 7.96 PAEN-AU::ICGC_0498 1 8214142 231450770 30 96 148 9 11 5 5 66 0.31 0 41 0 0 41 41 41 43 43 43 34.9 60.44 39.56 0 1 2 Whitelist PAEN-AU 11 0.77 0 0 0 0.59 1 High confidence PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine Canonical without polyploidization 126 0.43 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 2 NA NA 0 0 148 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA 11 11 11 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.7 0 NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 3 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 4 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 5 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 6 NA NA 0 0 148 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.13 NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 7 1744569 1819012 1 1 148 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 34.9 0.05 99.73 0 2 3 Whitelist PAEN-AU 0.62 0.1 NA NA 0.59 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 8 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 9 4964913 92127031 2 25 148 2 2 0 0 21 0.26 0 17 0 0 17 11 17 27 18 18 34.9 59.43 40.43 3 1 2 Whitelist PAEN-AU 1_11 0.96 0 0 0 0.59 1 Linked to high confidence PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine Canonical without polyploidization 29 0.1 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 10 NA NA 0 0 148 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.07 NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 11 21255252 90295433 12 49 148 3 4 2 3 37 0.88 0 26 0 0 26 26 26 29 29 29 34.9 90.53 9.05 0 1 2 Whitelist PAEN-AU 1 0.56 0 0 0 0.91 1 High confidence PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine Canonical without polyploidization 61 0.21 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 12 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 13 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 14 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 15 NA NA 0 0 148 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.69 NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 16 30166281 30176518 1 3 148 0 1 0 0 2 0.39 1 3 NA 0 NA NA NA NA NA NA 34.9 99.65 0.01 0 1 2 Whitelist PAEN-AU 0.41 1 NA 0 0.59 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 4 0.01 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 17 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 18 NA NA 0 0 148 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.42 NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 19 6001369 6096388 1 1 148 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 34.9 0 99.83 0 2 NA Whitelist PAEN-AU 0.62 0.63 NA NA 0.59 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 20 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 21 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 22 32136146 32211145 1 1 148 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 34.9 100 0 0 1 NA Whitelist PAEN-AU 0.62 1 NA NA 0.59 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0498 X 32600290 33714712 1 1 148 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 34.9 99.78 0 0 0 1 Whitelist PAEN-AU 0.62 0.04 NA NA 0.59 1 No PAEN-AU ICGC_0498 PAEN 0.93 1.64 Panc-Endocrine NA 2 0.01 NA 2 PAEN-AU DO48578 ICGC_0498 female alive C25.4 59 7 7 NA Included Panc-Endocrine PAEN AU 1 0.23 PAEN-AU::ICGC_0501 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 5 176695235 176980445 1 1 5 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 68.53 0.16 99.72 0 2 3 Whitelist PAEN-AU 0.62 0.52 NA NA 0.59 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 11 63956275 63966981 1 1 5 1 0 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 68.53 99.57 0 0 1 NA Whitelist PAEN-AU 0.62 0.44 NA NA 0.59 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 12 94865729 94940343 1 1 5 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 68.53 0.06 99.86 0 2 3 Whitelist PAEN-AU 0.62 0.44 NA NA 0.59 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.32 NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 18 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.32 NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 20 6968430 7850917 1 1 5 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 68.53 0 98.93 0 2 NA Whitelist PAEN-AU 0.62 0.27 NA NA 0.59 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 2 0.2 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0501 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0501 PAEN 0.85 1.28 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48581 ICGC_0501 male alive C25.4 64 40 40 NA Included Panc-Endocrine PAEN AU 1 1.32 PAEN-AU::ICGC_0533 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 4 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.2 NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 12 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.16 NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ICGC_0533 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ICGC_0533 PAEN 0.96 1.87 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO48557 ICGC_0533 male alive C25.4 52 227 227 NA Included Panc-Endocrine PAEN AU 1 7.47 PAEN-AU::ITNET-1257 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 7 147138959 147220345 1 1 3 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 42.39 99.77 0 0 3 4 Whitelist PAEN-AU 0.62 0.36 NA NA 0.59 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 2 0.33 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 14 94724984 94849919 1 1 3 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 42.39 96.23 0.06 0 3 4 Whitelist PAEN-AU 0.62 0.25 NA NA 0.59 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 2 0.33 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1257 X 33337138 33938750 1 1 3 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 42.39 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.34 NA NA 0.59 0 No PAEN-AU ITNET-1257 PAEN 0.74 2.29 Panc-Endocrine NA 2 0.33 NA 3 PAEN-AU DO51170 ITNET-1257 male alive C25.4 41 3016 3016 NA Included Panc-Endocrine PAEN AU 1 99.21 PAEN-AU::ITNET-1265 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 7 77176380 77302941 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 58.84 0.08 99.69 0 2 3 Whitelist PAEN-AU 0.62 0.27 NA NA 0.59 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 2 0.5 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 4 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 12 NA NA 0 0 2 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.25 NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 19 NA NA 0 0 2 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.14 NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1265 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1265 PAEN 0.87 1.44 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51171 ITNET-1265 female alive C25.4 74 2943 2943 NA Included Panc-Endocrine PAEN AU 1 96.81 PAEN-AU::ITNET-1266 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 2 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 3 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 4 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 6 10102996 25928913 4 7 30 2 0 1 1 3 0.57 0 1 0 0 NA NA NA NA NA NA 15.14 66.38 33.47 0 2 NA Whitelist PAEN-AU 0.77 0.01 0 0 0.64 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 11 0.18 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 9 95240661 107521289 1 1 30 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.14 8.7 91.13 0 1 2 Whitelist PAEN-AU 0.62 1 NA NA 0.59 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 2 0.03 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 11 67900950 116481177 14 17 30 3 3 5 3 3 0.84 0 17 0 0 17 17 17 17 17 17 15.14 18.92 80.64 0 2 1 Whitelist PAEN-AU 17 0.93 0 0 0 0.88 1 High confidence PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine Canonical without polyploidization 31 0.52 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 12 105549017 131180732 3 6 30 2 1 0 0 3 0.3 0 1 0 0 NA NA NA NA NA NA 15.14 0 99.92 0 2 NA Whitelist PAEN-AU 0.62 0.01 0 0 0.59 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 9 0.15 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 17 47084966 57048644 1 4 30 0 0 1 1 2 0.57 0 4 0 0 4 4 4 5 5 5 15.14 11.69 88.3 0 1 2 Whitelist PAEN-AU 11 1 0.01 0 0 0.64 1 Linked to high confidence PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine Canonical without polyploidization 6 0.1 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1266 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 1 No PAEN-AU ITNET-1266 PAEN 0.95 1.93 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51172 ITNET-1266 male alive C25.4 62 2723 2723 NA Included Panc-Endocrine PAEN AU 1 89.57 PAEN-AU::ITNET-1270 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 22 NA NA 0 0 1 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.05 NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1270 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1270 PAEN 0.92 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51173 ITNET-1270 female alive C25.4 39 1244 1244 NA Included Panc-Endocrine PAEN AU 1 40.92 PAEN-AU::ITNET-1286 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 6 18900836 20288126 1 1 1 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 7.85 0.81 99.04 0 1 2 Whitelist PAEN-AU 0.62 0.19 NA NA 0.59 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 2 1 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1286 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1286 PAEN 0.92 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51175 ITNET-1286 female deceased C25.4 71 413 413 NA Included Panc-Endocrine PAEN AU 1 13.59 PAEN-AU::ITNET-1288 1 72066163 72302655 1 1 24 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 59.13 0 100 0 2 NA Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 2 0.04 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 2 8661053 64257175 1 2 24 0 2 0 0 0 0.11 1 2 NA 0.01 NA NA NA NA NA NA 59.13 0.05 99.86 0 2 4 Whitelist PAEN-AU 0.54 1 NA 0.01 0.48 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 4 0.08 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 3 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 4 95201159 182900755 1 5 24 5 0 0 0 0 0 0.02 11 0 0 11 4 7 13 5 7 59.13 99.87 0.11 0 1 3 Whitelist PAEN-AU 0.1 0.08 0 0 0.07 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 10 0.21 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 5 165319123 166354944 1 3 24 3 0 0 0 0 0.03 0.02 4 0 0 4 4 4 7 5 5 59.13 99.43 0.43 0 2 6 Whitelist PAEN-AU 0.41 0.06 0 0 0.33 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 6 0.12 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 6 NA NA 0 0 24 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.86 NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 7 146646231 147018823 2 2 24 2 0 0 0 0 0.11 0.37 2 NA 0 NA NA NA NA NA NA 59.13 99.54 0.23 0 2 4 Whitelist PAEN-AU 0.54 0.62 NA 0 0.48 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 4 0.08 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 8 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 9 33325331 33455091 1 1 24 0 1 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 59.13 0.09 99.8 0 2 3 Whitelist PAEN-AU 0.62 0.83 NA NA 0.59 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 2 0.04 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 10 104816824 104887445 1 1 24 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 59.13 99.82 0 0 3 4 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 2 0.04 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 11 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 12 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 13 60274513 67387597 1 2 24 2 0 0 0 0 0.11 0.2 4 NA 0 4 4 4 5 5 5 59.13 99.59 0.41 0 2 4 Whitelist PAEN-AU 0.54 0.42 NA 0 0.48 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 4 0.08 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 14 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 15 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 16 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 17 17850685 71124342 1 3 24 0 3 0 0 0 0.03 0.03 5 0 0 5 3 5 5 3 5 59.13 100 0 0 4 5 Whitelist PAEN-AU 0.41 0.1 0 0 0.33 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 6 0.12 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 18 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 19 6113105 6130990 1 1 24 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 59.13 99.56 0 0 4 NA Whitelist PAEN-AU 0.62 0.63 NA NA 0.59 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 2 0.04 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 20 15147934 15705946 1 1 24 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 59.13 98.88 0.89 0 2 4 Whitelist PAEN-AU 0.62 0.65 NA NA 0.59 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 2 0.04 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 21 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 22 NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1288 X NA NA 0 0 24 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1288 PAEN 0.88 2.98 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51176 ITNET-1288 female alive C25.4 64 1378 1378 NA Included Panc-Endocrine PAEN AU 1 45.33 PAEN-AU::ITNET-1293 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1293 X 32964587 33355065 2 2 2 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 48.99 100 0 0 1 NA Whitelist PAEN-AU 0.54 0.01 NA 0 0.48 0 No PAEN-AU ITNET-1293 PAEN 0.94 2.51 Panc-Endocrine NA 4 1 NA 3 PAEN-AU DO51177 ITNET-1293 male alive C25.4 36 1072 1072 NA Included Panc-Endocrine PAEN AU 1 35.26 PAEN-AU::ITNET-1301 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 5 31837113 49534026 1 1 9 0 1 0 0 0 0.39 0.11 2 NA NA NA NA NA NA NA NA 43.35 97.32 0 0 3 4 Whitelist PAEN-AU 0.62 0.28 NA NA 0.59 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 2 0.11 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 6 NA NA 0 0 9 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.68 NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 9 8513186 8533159 1 1 9 0 1 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 43.35 99.84 0 0 4 NA Whitelist PAEN-AU 0.62 0.55 NA NA 0.59 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 2 0.11 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 13 NA NA 0 0 9 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.51 NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 15 54965811 59365766 1 2 9 1 0 0 0 1 0.39 0.02 1 NA NA NA NA NA NA NA NA 43.35 84.59 0 0 3 NA Whitelist PAEN-AU 0.54 0.09 NA NA 0.59 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 3 0.17 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1301 X 31429382 33113520 1 3 9 3 0 0 0 0 0.03 0.01 1 0 0 NA NA NA NA NA NA 43.35 0 100 0 2 NA Whitelist PAEN-AU 0.41 0.04 0 0 0.33 0 No PAEN-AU ITNET-1301 PAEN 0.82 2.83 Panc-Endocrine NA 6 0.33 NA 4 PAEN-AU DO51178 ITNET-1301 male deceased C25.4 53 121 121 NA Included Panc-Endocrine PAEN AU 1 3.98 PAEN-AU::ITNET-1304 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 14 106855453 106936847 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 9.23 0 99.62 0 2 NA Whitelist PAEN-AU 0.62 0.19 NA NA 0.59 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 2 0.5 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1304 X 134753830 134802848 1 1 2 0 0 0 1 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 9.23 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.26 NA NA 0.59 0 No PAEN-AU ITNET-1304 PAEN 0.76 1.9 Panc-Endocrine NA 2 0.5 NA 2 PAEN-AU DO51179 ITNET-1304 male alive C25.4 64 2456 2456 NA Included Panc-Endocrine PAEN AU 1 80.79 PAEN-AU::ITNET-1308 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 2 NA NA 0 0 9 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.77 NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 4 181770025 182271616 1 2 9 2 0 0 0 0 0.11 0.12 2 NA 0 NA NA NA NA NA NA 54.51 0.14 99.85 0 1 2 Whitelist PAEN-AU 0.54 0.3 NA 0 0.48 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 4 0.22 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 5 NA NA 0 0 9 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.69 NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 9 9361701 9437327 1 1 9 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 54.51 0.05 99.81 0 1 2 Whitelist PAEN-AU 0.62 0.55 NA NA 0.59 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 12 11666520 11690904 1 1 9 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 54.51 0.02 99.9 0 1 2 Whitelist PAEN-AU 0.62 0.6 NA NA 0.59 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 16 78108089 78119372 1 1 9 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 54.51 99.66 0 0 1 NA Whitelist PAEN-AU 0.62 0.45 NA NA 0.59 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 18 20560661 20610611 1 1 9 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 54.51 0.06 99.9 0 2 3 Whitelist PAEN-AU 0.62 0.45 NA NA 0.59 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 22 44003884 44180734 1 1 9 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 54.51 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.27 NA NA 0.59 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1308 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1308 PAEN 0.63 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51180 ITNET-1308 male alive C25.4 56 NA NA NA Included Panc-Endocrine PAEN AU 0 NA PAEN-AU::ITNET-1309 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 9 28868872 29051133 1 1 1 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 69.01 0.13 99.7 0 1 2 Whitelist PAEN-AU 0.62 0.14 NA NA 0.59 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 2 1 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1309 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1309 PAEN 0.82 2.75 Panc-Endocrine NA 0 0 NA 3 PAEN-AU DO51181 ITNET-1309 female alive C25.4 26 2402 2402 NA Included Panc-Endocrine PAEN AU 1 79.01 PAEN-AU::ITNET-1312 1 24057862 24107292 1 1 9 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 59.37 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.76 NA NA 0.59 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 3 116126227 116554710 1 1 9 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 59.37 99.95 0 0 0 1 Whitelist PAEN-AU 0.62 0.72 NA NA 0.59 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 7 95931660 96048600 1 1 9 0 1 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 59.37 0.07 99.68 0 2 3 Whitelist PAEN-AU 0.62 0.64 NA NA 0.59 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 12 99390294 99538856 1 1 9 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 59.37 0 99.92 1 2 NA Whitelist PAEN-AU 0.62 0.6 NA NA 0.59 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 20 15380603 15906320 1 2 9 0 2 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 59.37 0.07 98.96 0 2 3 Whitelist PAEN-AU 0.54 0.01 0 0 0.48 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 4 0.22 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1312 X 33696037 33707322 1 1 9 0 0 1 0 0 0.39 0.07 1 NA 0 NA NA NA NA NA NA 59.37 100 0 0 1 NA Whitelist PAEN-AU 0.62 0.21 NA 0 0.59 0 No PAEN-AU ITNET-1312 PAEN 0.87 1.38 Panc-Endocrine NA 2 0.11 NA 2 PAEN-AU DO51182 ITNET-1312 male deceased C25.4 50 522 522 NA Included Panc-Endocrine PAEN AU 1 17.17 PAEN-AU::ITNET-1314 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.41 NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 11 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.33 NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 21 31026533 31183731 1 1 3 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 8.07 0 77.73 0 2 NA Whitelist PAEN-AU 0.62 0.13 NA NA 0.59 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 2 0.33 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1314 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1314 PAEN 0.95 1.92 Panc-Endocrine NA 0 0 NA 2 PAEN-AU DO51184 ITNET-1314 female alive C25.4 34 2345 2345 NA Included Panc-Endocrine PAEN AU 1 77.14 PAEN-AU::ITNET-1320 1 51232897 51480801 1 1 16 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 41.79 0.1 99.9 0 0 2 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 3 193801212 193925594 1 1 16 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 41.79 0.06 99.89 0 2 4 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 4 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 1 NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 5 166931211 167754466 1 1 16 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 41.79 99.41 0.46 0 2 4 Whitelist PAEN-AU 0.62 1 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 6 NA NA 0 0 16 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.49 NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 7 NA NA 0 0 16 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.44 NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 8 62636397 63404605 1 1 16 0 0 0 1 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 41.79 0.52 99.33 0 2 4 Whitelist PAEN-AU 0.62 0.42 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 14 NA NA 0 0 16 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PAEN-AU NA 0.25 NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 17 20507250 58208847 2 5 16 1 0 0 1 3 0.57 0 7 0 0 7 7 7 10 10 10 41.79 99.96 0 0 4 3 Whitelist PAEN-AU 0.93 0 0 0 0.64 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 7 0.22 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 20 49128746 60464479 1 1 16 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 6 6 41.79 99.02 0 0 3 4 Whitelist PAEN-AU 0.62 0 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-AU NA NA NA NA NA 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 0 0 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-AU::ITNET-1320 X 33027903 33369872 1 1 16 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 41.79 0.22 99.43 0 0 2 Whitelist PAEN-AU 0.62 0.79 NA NA 0.59 0 No PAEN-AU ITNET-1320 PAEN 0.75 2.75 Panc-Endocrine NA 2 0.06 NA 4 PAEN-AU DO51187 ITNET-1320 female alive C25.4 69 2318 2318 NA Included Panc-Endocrine PAEN AU 1 76.25 PAEN-IT::ITNET-0026 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 9 NA NA 0 0 3 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.29 NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 11 102329382 102483606 1 1 3 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 49.67 99.57 0 0 1 NA Whitelist PAEN-IT 0.62 0.33 NA NA 0.59 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0026 X 33133189 33157073 1 1 3 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 49.67 0.02 99.77 0 2 3 Whitelist PAEN-IT 0.62 0.34 NA NA 0.59 0 No PAEN-IT ITNET-0026 PAEN 0.93 1.48 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52122 ITNET-0026 female alive C25.4 43 1986 1986 NA Included Panc-Endocrine PAEN IT 1 65.33 PAEN-IT::ITNET-0028 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 3 174558466 188103738 1 2 3 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 5 3 3 60.36 99.79 0.07 0 1 0 Whitelist PAEN-IT 0.68 0.06 NA 0 0.64 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 4 0.67 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0028 X 32843257 33694239 1 1 3 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 60.36 100 0 0 0 1 Whitelist PAEN-IT 0.62 0.34 NA NA 0.59 0 No PAEN-IT ITNET-0028 PAEN 0.89 1.37 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52123 ITNET-0028 male alive C25.4 56 5415 5415 NA Included Panc-Endocrine PAEN IT 1 178.12 PAEN-IT::ITNET-0052 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 3 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 4 169232800 170560076 1 1 15 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 47.55 0.12 99.38 0 2 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 2 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 5 58541778 96163929 1 2 15 1 1 0 0 0 0.57 0.24 1 NA 0 NA NA NA NA NA NA 47.55 0 99.86 0 2 NA Whitelist PAEN-IT 0.68 0.48 NA 0 0.64 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 4 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 9 21850892 109368531 1 3 15 3 0 0 0 0 0.03 0.02 4 0.01 0 4 3 4 5 3 5 47.55 1.26 95.62 0 2 1 Whitelist PAEN-IT 0.41 0.08 0.01 0 0.33 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 6 0.2 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 10 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.75 NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 12 20795552 99339135 1 2 15 2 0 0 0 0 0.11 0.15 4 NA 0 4 4 4 6 6 6 47.55 0.71 99.27 0 1 2 Whitelist PAEN-IT 0.54 0.36 NA 0 0.48 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 4 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 13 20337414 53380581 1 3 15 1 2 0 0 0 0.3 0.01 3 0 0 NA NA NA NA NA NA 47.55 0.15 99.66 0 2 1 Whitelist PAEN-IT 0.62 0.06 0 0 0.59 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 6 0.2 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 18 1964639 68873399 2 2 15 0 0 1 1 0 0.57 0.01 6 0.37 0.08 6 6 6 7 7 7 47.55 4.61 95.35 0 1 2 Whitelist PAEN-IT 0.68 0.03 0.37 0.08 0.64 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 4 0.13 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0052 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0052 PAEN 0.78 1.49 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 PAEN-IT DO52124 ITNET-0052 male deceased C25.4 58 2359 2359 NA Included Panc-Endocrine PAEN IT 1 77.6 PAEN-IT::ITNET-0087 1 NA NA 0 0 28 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.9 NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 3 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 5 57246872 58728523 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.54 0.82 99.06 0 2 3 Whitelist PAEN-IT 0.62 1 NA NA 0.59 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 2 0.04 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 7 65951603 149642677 1 2 28 0 2 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 5 5 16.54 99.78 0 0 3 4 Whitelist PAEN-IT 0.54 0.87 NA 0 0.48 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 4 0.07 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 8 15876266 129305739 19 21 28 4 4 5 6 2 0.9 0 25 0 0 25 16 16 26 17 17 16.54 3.21 96.79 15 2 1 Whitelist PAEN-IT 0.95 0 0 0 0.92 1 High confidence PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine Canonical without polyploidization 40 0.71 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 9 21967884 22035368 1 1 28 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 16.54 0 99.33 0 2 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 2 0.04 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 12 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 16 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0087 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0087 PAEN 0.81 2 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52125 ITNET-0087 male deceased C25.4 79 140 140 NA Included Panc-Endocrine PAEN IT 1 4.61 PAEN-IT::ITNET-0100 1 51004494 246226496 1 12 160 4 1 0 0 7 0.04 0.88 6 0 0 6 3 6 6 3 3 38.57 91.09 8.91 0 4 1 Whitelist PAEN-IT 0.93 1 0 0 0.36 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 17 0.05 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 2 164688457 164757947 2 2 160 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 12 12 12 38.57 18.22 81.69 0 1 2 Whitelist PAEN-IT 0.68 0 0 0 0.64 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 4 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 3 4813390 188192537 1 7 160 5 0 0 0 2 0 0.44 11 0 0 11 8 11 12 9 9 38.57 21.89 77.97 0 2 1 Whitelist PAEN-IT 0.47 0.69 0 0 0.07 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 12 0.04 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 4 78635380 115372615 2 2 160 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 8 5 5 38.57 57.23 42.55 0 1 2 Whitelist PAEN-IT 0.68 0 0 0 0.64 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 4 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 5 155511814 162830577 1 4 160 2 0 0 0 2 0.11 0.07 3 0 0 NA NA NA 4 4 4 38.57 5.77 94.1 0 2 1 Whitelist PAEN-IT 0.54 0.21 0 0 0.48 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 6 0.02 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 6 31775091 31819358 1 1 160 1 0 0 0 0 0.39 0.62 1 0 NA NA NA NA NA NA NA 38.57 0 99.86 0 2 NA Whitelist PAEN-IT 0.62 0.83 0 NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 7 NA NA 0 0 160 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.06 NA NA NA 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 8 113571705 113587857 1 1 160 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 38.57 0 99.99 0 2 NA Whitelist PAEN-IT 0.62 0.08 NA NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 9 131333144 131495346 1 1 160 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 4 4 4 38.57 31.31 68.54 0 1 2 Whitelist PAEN-IT 0.62 1 0 NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 10 12507104 76356326 1 7 160 7 0 0 0 0 0 0.09 8 0 0 8 8 8 9 9 9 38.57 0.21 99.62 0 1 2 Whitelist PAEN-IT 0.02 0.24 0 0 0.01 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 14 0.04 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 11 1770173 106879024 2 10 160 0 0 2 2 6 0.26 0 4 0 0 4 4 4 4 4 4 38.57 8.89 90.55 0 1 2 Whitelist PAEN-IT 0.54 0.02 0 0 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 14 0.04 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 12 8800479 128049401 1 4 160 2 0 1 1 0 0.57 0.85 1 0 0 NA NA NA NA NA NA 38.57 0 99.92 0 2 NA Whitelist PAEN-IT 0.68 0.99 0 0 0.64 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 8 0.02 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 13 32942135 114786647 1 14 160 3 1 0 0 10 0.11 0 4 0 0 4 0 4 5 3 3 38.57 72.27 27.4 0 0 1 Whitelist PAEN-IT 10 0.68 0 0 0 0.48 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 18 0.06 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 14 41492227 93416299 1 3 160 2 0 0 1 0 0.3 0.1 4 0 0 4 4 4 5 5 5 38.57 45.23 53.86 0 1 2 Whitelist PAEN-IT 0.62 0.27 0 0 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 6 0.02 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 15 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 16 6896553 85559519 1 2 160 1 1 0 0 0 0.57 0.8 1 0 0 NA NA NA NA NA NA 38.57 99.91 0 0 1 NA Whitelist PAEN-IT 0.68 0.95 0 0 0.64 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 4 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 17 74393618 74407783 1 1 160 0 0 1 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 38.57 0 99.97 0 2 NA Whitelist PAEN-IT 0.62 0.33 NA NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 18 28076312 28092264 1 1 160 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 38.57 99.94 0 0 1 NA Whitelist PAEN-IT 0.62 0.33 NA NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 19 47524841 54530542 1 1 160 1 0 0 0 0 0.39 0.56 2 0.26 NA NA NA NA NA NA NA 38.57 11.85 87.98 0 1 2 Whitelist PAEN-IT 0.62 0.79 0.26 NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 20 15112115 30840466 1 2 160 2 0 0 0 0 0.11 0.59 2 0.01 0 NA NA NA 5 3 3 38.57 26.1 72.91 0 1 2 Whitelist PAEN-IT 0.54 0.81 0.01 0 0.48 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 4 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 21 34590492 34625846 1 1 160 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 38.57 12.65 64.7 0 2 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 2 0.01 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 22 NA NA 0 0 160 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0100 X 16992878 99345559 1 3 160 1 1 1 0 0 0.8 0.86 1 0 0 NA NA NA NA NA NA 38.57 99.9 0 0 1 NA Whitelist PAEN-IT 0.87 0.99 0 0 0.84 0 No PAEN-IT ITNET-0100 PAEN 0.95 1.8 Panc-Endocrine NA 6 0.02 NA 2 PAEN-IT DO52126 ITNET-0100 male alive C25.4 50 4346 4346 NA Included Panc-Endocrine PAEN IT 1 142.96 PAEN-IT::ITNET-0107 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 6 85351066 85404997 1 1 2 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 58.92 99.85 0 0 1 NA Whitelist PAEN-IT 0.62 0.3 NA NA 0.59 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 2 0.5 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 7 19949865 20075642 1 1 2 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 58.92 0 99.77 0 2 NA Whitelist PAEN-IT 0.62 0.27 NA NA 0.59 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 2 0.5 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0107 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0107 PAEN 0.89 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52127 ITNET-0107 female alive C25.4 41 4260 4260 NA Included Panc-Endocrine PAEN IT 1 140.13 PAEN-IT::ITNET-0118 1 168203802 202790967 2 2 19 2 0 0 0 0 0.11 0.18 5 0 0 5 5 5 11 7 7 6.8 16.59 83.41 0 2 1 Whitelist PAEN-IT 0.54 0.4 0 0 0.48 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 4 0.11 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 6 599711 1078684 1 1 19 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.8 0.28 99.48 0 2 3 Whitelist PAEN-IT 0.62 1 NA NA 0.59 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 2 0.05 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 15 35208509 67092577 14 14 19 3 3 4 4 0 0.96 0 15 0 0 15 15 15 17 17 17 6.8 10.37 74.22 0 2 1 Whitelist PAEN-IT 0.98 0 0 0 0.98 1 High confidence PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine Canonical without polyploidization 28 0.74 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 21 43384223 43754600 1 1 19 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 6.8 0.77 76.58 0 2 3 Whitelist PAEN-IT 0.62 0.44 NA NA 0.59 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 2 0.05 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0118 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0118 PAEN 0.56 1.91 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52128 ITNET-0118 male alive C25.4 42 2771 2771 NA Included Panc-Endocrine PAEN IT 1 91.15 PAEN-IT::ITNET-0124 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 3 106417486 106767641 1 1 6 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 37.92 0.18 99.68 0 1 2 Whitelist PAEN-IT 0.62 0.61 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 4 182281901 182308837 1 1 6 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 37.92 99.98 0 0 3 4 Whitelist PAEN-IT 0.62 0.59 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 7 146577126 146757917 1 1 6 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 37.92 99.77 0 0 3 4 Whitelist PAEN-IT 0.62 0.53 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 9 21747614 21991956 1 1 6 1 0 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 37.92 0.17 99.69 0 1 2 Whitelist PAEN-IT 0.62 0.44 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 12 115669758 115820736 1 1 6 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 37.92 99.98 0 0 4 5 Whitelist PAEN-IT 0.62 0.49 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 20 14454168 14831456 1 1 6 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 37.92 99.03 0 0 3 4 Whitelist PAEN-IT 0.62 0.31 NA NA 0.59 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 2 0.17 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0124 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0124 PAEN 0.86 2.79 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52129 ITNET-0124 female alive C25.4 46 2828 2828 NA Included Panc-Endocrine PAEN IT 1 93.03 PAEN-IT::ITNET-0128 1 43012095 43213481 1 3 26 0 1 0 0 2 0.39 0.45 4 NA 0 4 4 4 5 5 5 86.85 100 0 0 4 6 Whitelist PAEN-IT 0.87 0.7 NA 0 0.59 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 4 0.08 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 2 NA NA 0 0 26 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.51 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 3 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 5 6794293 176386910 2 7 26 0 1 0 1 5 0.57 0 11 0 0 11 11 11 13 13 13 86.85 99.86 0 0 6 4 Whitelist PAEN-IT 0.77 0 0 0 0.64 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 9 0.17 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 6 110693794 130992682 1 3 26 0 2 0 0 1 0.11 0.07 3 0 0 NA NA NA 6 5 6 86.85 99.85 0 0 6 4 Whitelist PAEN-IT 0.62 0.2 0 0 0.48 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 5 0.1 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 8 41619346 42237412 1 2 26 0 2 0 0 0 0.11 0.38 2 NA 0 NA NA NA NA NA NA 86.85 99.99 0 0 4 6 Whitelist PAEN-IT 0.54 0.63 NA 0 0.48 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 4 0.08 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 10 NA NA 0 0 26 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.59 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 11 9813328 123484173 1 4 26 0 1 1 0 2 0.57 0.03 4 0 0 4 3 4 5 3 3 86.85 73.34 26.23 0 4 2 Whitelist PAEN-IT 0.68 0.11 0 0 0.64 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 6 0.12 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 13 NA NA 0 0 26 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.46 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 14 NA NA 0 0 26 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.42 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 15 NA NA 0 0 26 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.76 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 16 NA NA 0 0 26 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.36 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 18 57794708 58013954 1 1 26 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA 4 3 4 86.85 95.35 0 0 3 5 Whitelist PAEN-IT 0.62 0.75 NA NA 0.59 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 2 0.04 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 19 NA NA 0 0 26 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.25 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 20 NA NA 0 0 26 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.68 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0128 X NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0128 PAEN 0.8 3.75 Panc-Endocrine NA 0 0 NA 4 PAEN-IT DO52131 ITNET-0128 male alive C25.4 38 3576 3576 NA Included Panc-Endocrine PAEN IT 1 117.63 PAEN-IT::ITNET-0134 1 NA NA 0 0 55 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.57 NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 2 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 3 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 4 182541123 183370387 1 1 55 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 3.59 0 99.99 0 2 NA Whitelist PAEN-IT 0.62 0.4 NA NA 0.59 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 5 95406416 95486191 1 1 55 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 3.59 0.04 99.82 0 2 3 Whitelist PAEN-IT 0.62 0.5 NA NA 0.59 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 6 64428730 65067901 1 2 55 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 3.59 0.11 99.74 0 1 2 Whitelist PAEN-IT 0.54 0.93 NA 0 0.48 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 4 0.04 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 7 153594131 158491469 3 6 55 1 1 1 0 3 0.8 0 3 0 0 NA NA NA NA NA NA 3.59 0.13 99.64 0 2 1 Whitelist PAEN-IT 0.93 0.01 0 0 0.84 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 9 0.08 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 8 80326174 145581514 10 14 55 1 3 3 3 4 0.75 0 4 0 0 4 4 4 6 6 6 3.59 9.94 85.74 0 1 2 Whitelist PAEN-IT 0.68 0 0 0 0.83 0 Low confidence PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine Canonical without polyploidization 24 0.22 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 9 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 11 NA NA 0 0 55 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.02 0 NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 12 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 13 NA NA 0 0 55 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.05 0 NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 14 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 16 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 18 25224223 30154067 3 8 55 2 1 0 0 5 0.3 0 2 0 0 NA NA NA 4 3 4 3.59 89.04 6.31 0 2 4 Whitelist PAEN-IT 0.62 0 0 0 0.59 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 11 0.1 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 20 31362408 38121094 3 6 55 2 0 0 1 3 0.3 0 1 0 0 NA NA NA NA NA NA 3.59 0 99.01 0 2 NA Whitelist PAEN-IT 0.62 0.01 0 0 0.59 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 9 0.08 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 21 16958588 17187311 1 3 55 0 0 0 1 2 0.39 0.03 2 NA 0 NA NA NA NA NA NA 3.59 12.59 64.76 0 1 2 Whitelist PAEN-IT 0.62 0.11 NA 0 0.59 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 4 0.04 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0134 X 33147946 33828062 2 2 55 0 2 0 0 0 0.11 0.2 2 0 0 NA NA NA 5 3 3 3.59 1.54 98.24 0 2 3 Whitelist PAEN-IT 0.54 0.42 0 0 0.48 0 No PAEN-IT ITNET-0134 PAEN 0.61 2.02 Panc-Endocrine NA 4 0.04 NA 2 PAEN-IT DO52132 ITNET-0134 female deceased C25.4 71 287 287 NA Included Panc-Endocrine PAEN IT 1 9.44 PAEN-IT::ITNET-0148 1 NA NA 0 0 13 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 2 NA NA 0 0 13 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 4 NA NA 0 0 13 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.81 NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 6 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 7 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 8 21791398 21997622 1 1 13 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 59.64 99.88 0 0 1 NA Whitelist PAEN-IT 0.62 0.33 NA NA 0.59 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 2 0.08 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 10 84181420 84458375 1 1 13 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 59.64 99.82 0 0 1 NA Whitelist PAEN-IT 0.62 0.7 NA NA 0.59 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 2 0.08 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 11 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 12 811889 871496 1 1 13 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 59.64 0 99.92 0 2 NA Whitelist PAEN-IT 0.62 0.71 NA NA 0.59 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 2 0.08 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 14 80227135 80268136 1 1 13 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 59.64 0 100 0 2 NA Whitelist PAEN-IT 0.62 0.59 NA NA 0.59 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 2 0.08 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 16 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 17 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.55 NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 18 NA NA 0 0 13 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.54 NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 20 15343811 15884835 2 2 13 2 0 0 0 0 0.11 0.03 2 NA 0 NA NA NA NA NA NA 59.64 0.86 98.16 0 1 2 Whitelist PAEN-IT 0.54 0.11 NA 0 0.48 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 4 0.15 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0148 X 32803091 67678799 1 2 13 1 1 0 0 0 0.57 0.14 2 NA 0 NA NA NA NA NA NA 59.64 99.77 0 0 0 1 Whitelist PAEN-IT 0.68 0.33 NA 0 0.64 0 No PAEN-IT ITNET-0148 PAEN 0.91 1.38 Panc-Endocrine NA 4 0.15 NA 2 PAEN-IT DO52135 ITNET-0148 female alive C25.4 47 2054 2054 NA Included Panc-Endocrine PAEN IT 1 67.57 PAEN-IT::ITNET-0152 1 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 2 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 3 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 4 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 5 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 6 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 7 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 8 NA NA 0 0 227 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0 NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 9 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 10 117460104 122847325 3 6 227 2 1 0 0 3 0.3 0.2 6 0 0 6 6 6 7 7 7 3.47 0.16 99.73 0 1 2 Whitelist PAEN-IT 0.68 0.43 0 0 0.59 1 Linked to high confidence PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine Canonical without polyploidization 9 0.02 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 11 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 12 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 13 NA NA 0 0 227 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.26 NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 14 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 15 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 16 76601875 79009992 1 1 227 0 0 1 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 3.47 0 99.91 0 2 NA Whitelist PAEN-IT 0.62 0.13 NA NA 0.59 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 2 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 17 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 18 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 19 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 20 31908654 59087716 2 5 227 0 0 1 1 3 0.57 0.5 6 0 0 6 6 6 7 7 7 3.47 41.13 57.89 1 1 2 Whitelist PAEN-IT 0.93 0.74 0 0 0.64 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 7 0.02 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 21 NA NA 0 0 227 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 22 17924903 47818249 16 99 227 6 3 5 2 83 0.48 0 30 0 0 30 30 30 32 32 32 3.47 25.74 74.26 0 1 2 Whitelist PAEN-IT 0.81 0 0 0 0.64 1 High confidence PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine Canonical without polyploidization 115 0.25 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0152 X 808303 155214868 109 196 227 29 26 27 27 87 0.98 0 122 0 0 122 122 122 123 123 123 3.47 44.19 55.48 1 1 2 Whitelist PAEN-IT 10 0.98 0 0 0 0.99 1 High confidence PAEN-IT ITNET-0152 PAEN 0.82 1.96 Panc-Endocrine Canonical without polyploidization 305 0.67 NA 2 PAEN-IT DO52137 ITNET-0152 female deceased C25.4 30 1570 1570 NA Included Panc-Endocrine PAEN IT 1 51.64 PAEN-IT::ITNET-0673 1 210710282 235865163 1 1 11 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 5 3 3 2.46 10.81 89.19 0 1 2 Whitelist PAEN-IT 0.62 0.81 NA NA 0.59 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 2 0.09 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 2 163236323 191745341 1 1 11 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA NA NA NA 2.46 11.72 88.18 0 1 2 Whitelist PAEN-IT 0.62 0.47 NA NA 0.59 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 2 0.09 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 3 139597513 140073777 1 1 11 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 2.46 0 99.95 0 2 NA Whitelist PAEN-IT 0.62 0.78 NA NA 0.59 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 2 0.09 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 4 62780836 63043067 1 1 11 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 2.46 0.14 99.65 0 1 2 Whitelist PAEN-IT 0.62 0.76 NA NA 0.59 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 2 0.09 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 7 90354744 92648667 1 1 11 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 2.46 0 99.77 0 2 NA Whitelist PAEN-IT 0.62 0.7 NA NA 0.59 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 2 0.09 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 8 NA NA 0 0 11 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.69 NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 13 NA NA 0 0 11 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.57 NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 15 51074094 93715719 2 2 11 1 1 0 0 0 0.57 0 5 0 0 5 5 5 6 6 6 2.46 20.98 78.08 0 1 2 Whitelist PAEN-IT 0.68 0 0 0 0.64 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 4 0.18 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0673 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0673 PAEN 0.8 1.98 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52139 ITNET-0673 female alive C25.4 61 1542 1542 NA Included Panc-Endocrine PAEN IT 1 50.72 PAEN-IT::ITNET-0695 1 32127618 95199582 3 3 14 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 26.82 25.3 74.69 0 1 2 Whitelist PAEN-IT 0.87 0 0 0 0.84 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 6 0.21 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 2 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 3 23805970 24249501 1 1 14 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.82 99.83 0 0 1 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 2 0.07 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 4 148747260 148758608 1 1 14 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.82 99.73 0 0 1 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 2 0.07 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 9 NA NA 0 0 14 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.27 NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 12 86710591 86733080 1 1 14 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 26.82 0.02 99.97 0 1 2 Whitelist PAEN-IT 0.62 0.73 NA NA 0.59 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 2 0.07 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 18 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.57 NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0695 X 9616622 9766386 1 1 14 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 26.82 0 99.78 0 2 NA Whitelist PAEN-IT 0.62 0.11 NA NA 0.59 0 No PAEN-IT ITNET-0695 PAEN 0.8 1.72 Panc-Endocrine NA 2 0.07 NA 2 PAEN-IT DO52141 ITNET-0695 female alive C25.4 46 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0700 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 7 109384993 109416548 1 1 3 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 49.72 0.02 99.75 0 2 3 Whitelist PAEN-IT 0.62 0.36 NA NA 0.59 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 11 16741586 17103716 1 1 3 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 49.72 99.3 0.27 0 1 2 Whitelist PAEN-IT 0.62 0.33 NA NA 0.59 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0700 X 32998948 33288154 1 1 3 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 49.72 0.19 99.58 0 1 2 Whitelist PAEN-IT 0.62 0.34 NA NA 0.59 0 No PAEN-IT ITNET-0700 PAEN 0.84 1.48 Panc-Endocrine NA 2 0.33 NA 2 PAEN-IT DO52142 ITNET-0700 female alive C25.4 62 1140 1140 NA Included Panc-Endocrine PAEN IT 1 37.5 PAEN-IT::ITNET-0783 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 2 78033121 78123500 1 1 16 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 57.83 99.89 0 0 1 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 3 49209585 49233662 1 1 16 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 57.83 99.95 0 0 1 NA Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 4 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 5 14706500 58280230 1 2 16 1 1 0 0 0 0.57 0.27 2 NA 0 NA NA NA NA NA NA 57.83 0.07 99.82 0 1 2 Whitelist PAEN-IT 0.68 0.51 NA 0 0.64 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 4 0.12 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 7 17509281 159128600 1 2 16 0 1 1 0 0 0.57 0.21 3 NA 0.01 NA NA NA 4 3 3 57.83 28.45 71.52 0 1 2 Whitelist PAEN-IT 0.68 0.44 NA 0.01 0.64 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 4 0.12 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 8 117944603 118166170 1 1 16 0 1 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 57.83 99.84 0.15 0 1 2 Whitelist PAEN-IT 0.62 0.15 0 NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 9 21528743 22131037 1 1 16 1 0 0 0 0 0.39 0.47 2 NA NA NA NA NA 4 3 3 57.83 20.66 78.66 0 0 1 Whitelist PAEN-IT 0.62 0.72 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 10 88504596 88669357 1 1 16 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 57.83 99.82 0 0 0 1 Whitelist PAEN-IT 0.62 0.76 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 11 NA NA 0 0 16 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.76 NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 13 95337587 95412176 1 1 16 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 57.83 0 100 0 2 NA Whitelist PAEN-IT 0.62 0.68 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 15 72527411 72698752 1 1 16 1 0 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 57.83 99.87 0 0 1 NA Whitelist PAEN-IT 0.62 0.62 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 17 8003447 8060206 1 1 16 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 57.83 0.07 99.89 0 2 3 Whitelist PAEN-IT 0.62 0.61 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0783 X 110964788 111068472 1 1 16 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 57.83 99.93 0.07 0 1 2 Whitelist PAEN-IT 0.62 0.79 NA NA 0.59 0 No PAEN-IT ITNET-0783 PAEN 0.78 1.39 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52143 ITNET-0783 male alive C25.4 59 1224 1224 NA Included Panc-Endocrine PAEN IT 1 40.26 PAEN-IT::ITNET-0813 1 211917602 236315626 1 2 44 1 1 0 0 0 0.57 0.58 1 NA 0 NA NA NA NA NA NA 43.6 100 0 0 1 NA Whitelist PAEN-IT 0.68 0.8 NA 0 0.64 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 4 0.05 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 2 15903959 170893429 1 3 44 2 1 0 0 0 0.3 1 3 0 0 NA NA NA NA NA NA 43.6 99.9 0 0 1 0 Whitelist PAEN-IT 0.62 1 0 0 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 6 0.07 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 3 436912 21028142 9 9 44 3 2 2 2 0 0.95 0 1 0 0 NA NA NA 6 6 6 43.6 0.08 99.9 2 2 NA Whitelist PAEN-IT 0.97 0 0 0 0.97 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 18 0.2 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 4 92280944 126812792 1 3 44 2 1 0 0 0 0.3 0.54 4 0 0 4 4 4 7 7 7 43.6 0.29 99.49 0 1 2 Whitelist PAEN-IT 0.62 0.77 0 0 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 6 0.07 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 5 126111578 126191064 1 1 44 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 43.6 0 99.86 0 2 NA Whitelist PAEN-IT 0.62 0.76 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 6 162588857 162610743 1 1 44 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 43.6 99.83 0 0 1 NA Whitelist PAEN-IT 0.62 0.76 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 7 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 8 74373967 74592887 1 1 44 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 43.6 0 99.99 0 2 NA Whitelist PAEN-IT 0.62 0.9 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 9 15465468 111760906 1 2 44 2 0 0 0 0 0.11 0.69 1 NA 0 NA NA NA NA NA NA 43.6 0 99.3 0 2 NA Whitelist PAEN-IT 0.54 0.89 NA 0 0.48 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 4 0.05 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 10 135340213 135367772 1 1 44 0 0 1 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 43.6 99.81 0 0 1 NA Whitelist PAEN-IT 0.62 0.9 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 11 22989589 23847871 1 1 44 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 43.6 99.57 0 0 1 NA Whitelist PAEN-IT 0.62 0.9 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 12 10999196 123477346 1 2 44 2 0 0 0 0 0.11 0.46 1 0 0 NA NA NA NA NA NA 43.6 0 99.98 0 2 NA Whitelist PAEN-IT 0.54 0.71 0 0 0.48 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 4 0.05 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 13 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 14 NA NA 0 0 44 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.65 NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 15 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 16 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 17 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 18 36741651 36874546 1 1 44 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 5 5 43.6 0.18 99.79 0 1 2 Whitelist PAEN-IT 0.62 0.58 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 20 13984610 15653212 1 2 44 2 0 0 0 0 0.11 0.07 3 0 0 NA NA NA NA NA NA 43.6 0.25 98.77 7 2 1 Whitelist PAEN-IT 0.54 0.21 0 0 0.48 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 4 0.05 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 21 38725918 38762319 1 1 44 0 1 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 43.6 70.16 0 0 1 NA Whitelist PAEN-IT 0.62 0.67 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 22 32101551 32304693 1 1 44 1 0 0 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 43.6 100 0 0 1 NA Whitelist PAEN-IT 0.62 0.66 NA NA 0.59 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0813 X 31594364 128777513 1 3 44 3 0 0 0 0 0.03 0.49 4 0 0 4 4 4 5 5 5 43.6 100 0 0 0 1 Whitelist PAEN-IT 0.41 0.73 0 0 0.33 0 No PAEN-IT ITNET-0813 PAEN 0.79 1.54 Panc-Endocrine NA 6 0.07 NA 2 PAEN-IT DO52146 ITNET-0813 male alive C25.4 75 1152 1152 NA Included Panc-Endocrine PAEN IT 1 37.89 PAEN-IT::ITNET-0850 1 77259307 221949613 1 8 19 1 1 0 0 6 0.57 0 8 0 0 8 8 8 10 10 10 16.94 54.72 45.28 0 1 2 Whitelist PAEN-IT 2 0.62 0 0 0 0.64 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 10 0.26 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 2 98594221 240713895 1 10 19 1 0 1 0 8 0.57 0 12 0 0 12 12 12 13 13 13 16.94 76.6 23.31 0 1 2 Whitelist PAEN-IT 1 0.96 0 0 0 0.64 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 12 0.32 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 9 91084226 120067974 1 5 19 0 0 0 1 4 0.39 0 3 0 0 NA NA NA 5 5 5 16.94 15.14 84.18 0 2 1 Whitelist PAEN-IT 1_2 0.93 0 0 0 0.59 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 6 0.16 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 10 NA NA 0 0 19 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.45 NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0850 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0850 PAEN 0.71 1.8 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52148 ITNET-0850 male alive C25.4 64 1187 1187 NA Included Panc-Endocrine PAEN IT 1 39.05 PAEN-IT::ITNET-0900 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 4 NA NA 0 0 2 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.32 NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 20 15797022 15879492 1 1 2 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 63.57 0.13 98.88 0 1 2 Whitelist PAEN-IT 0.62 0.15 NA NA 0.59 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 2 0.5 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0900 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0900 PAEN 0.86 1.42 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52149 ITNET-0900 female alive C25.4 66 541 541 NA Included Panc-Endocrine PAEN IT 1 17.8 PAEN-IT::ITNET-0935 1 145462330 145531183 1 1 10 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 50.53 58.15 41.84 0 2 NA Whitelist PAEN-IT 0.62 0.78 NA NA 0.59 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 2 0.1 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 4 149400328 181876523 1 2 10 2 0 0 0 0 0.11 0.14 1 NA 0 NA NA NA NA NA NA 50.53 0 99.89 0 2 NA Whitelist PAEN-IT 0.54 0.34 NA 0 0.48 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 4 0.2 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 5 NA NA 0 0 10 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.72 NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 7 151728378 151763383 1 1 10 1 0 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 50.53 0 96.83 0 2 NA Whitelist PAEN-IT 0.62 0.67 NA NA 0.59 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 2 0.1 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 14 80190839 81403493 1 2 10 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 50.53 0 99.08 0 2 NA Whitelist PAEN-IT 0.54 0.02 0 0 0.48 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 4 0.2 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0935 X 32129342 33064010 1 2 10 1 1 0 0 0 0.57 0.09 3 NA 0 NA NA NA NA NA NA 50.53 99.99 0.01 0 1 2 Whitelist PAEN-IT 0.68 0.24 NA 0 0.64 0 No PAEN-IT ITNET-0935 PAEN 0.68 1.47 Panc-Endocrine NA 4 0.2 NA 2 PAEN-IT DO52150 ITNET-0935 male alive C25.4 40 1097 1097 NA Included Panc-Endocrine PAEN IT 1 36.09 PAEN-IT::ITNET-0938 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 2 178110626 243001283 1 4 9 1 2 0 0 1 0.3 0 4 0 0 4 3 4 5 3 3 45.24 99.7 0.21 0 1 0 Whitelist PAEN-IT 0.54 0 0 0 0.59 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 7 0.39 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 6 NA NA 0 0 9 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.68 NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 9 115074773 115234214 1 1 9 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 45.24 0.11 99.21 0 2 3 Whitelist PAEN-IT 0.62 0.55 NA NA 0.59 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 2 0.11 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 11 NA NA 0 0 9 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.6 NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 14 NA NA 0 0 9 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.49 NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 17 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.45 NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0938 X 33059640 33242967 1 1 9 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 45.24 100 0 0 1 NA Whitelist PAEN-IT 0.62 0.62 NA NA 0.59 0 No PAEN-IT ITNET-0938 PAEN 0.33 1.52 Panc-Endocrine NA 2 0.11 NA 2 PAEN-IT DO52151 ITNET-0938 male alive C25.4 56 1096 1096 NA Included Panc-Endocrine PAEN IT 1 36.05 PAEN-IT::ITNET-0941 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 2 73670717 217931423 1 2 5 2 0 0 0 0 0.11 0.06 4 NA 0 4 4 4 5 5 5 49.13 99.9 0 0 0 1 Whitelist PAEN-IT 0.54 0.19 NA 0 0.48 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 4 0.4 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 5 134236198 134284334 1 1 5 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 49.13 0.03 99.84 0 1 2 Whitelist PAEN-IT 0.62 0.52 NA NA 0.59 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 2 0.2 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 7 64002353 64023241 1 1 5 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 49.13 0.01 99.76 0 1 2 Whitelist PAEN-IT 0.62 0.48 NA NA 0.59 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 2 0.2 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 13 NA NA 0 0 5 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.37 NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0941 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0941 PAEN 0.48 1.47 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52152 ITNET-0941 female alive C25.4 44 1082 1082 NA Included Panc-Endocrine PAEN IT 1 35.59 PAEN-IT::ITNET-0968 1 95538888 234231403 1 5 42 1 1 0 0 3 0.57 0 6 0 0 6 4 6 15 12 12 23.11 47.96 52.03 0 2 1 Whitelist PAEN-IT 0.62 0 0 0 0.64 1 Linked to high confidence PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine Canonical without polyploidization 7 0.08 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 2 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 3 NA NA 0 0 42 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.21 0 NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 4 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 5 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.76 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 6 135742406 136768087 1 1 42 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 23.11 0.6 99.25 0 2 3 Whitelist PAEN-IT 0.62 0.76 NA NA 0.59 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 7 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 8 NA NA 0 0 42 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.9 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 9 NA NA 0 0 42 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.46 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 10 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 11 16954949 18171375 1 1 42 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 23.11 98.67 0.9 0 1 2 Whitelist PAEN-IT 0.62 0.9 NA NA 0.59 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 12 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 13 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 14 74697762 76045379 1 1 42 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 7 3 3 23.11 9.19 89.89 0 2 3 Whitelist PAEN-IT 0.62 0 0 NA 0.59 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 16 NA NA 0 0 42 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.56 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 17 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 18 12732238 76910328 3 19 42 1 0 1 1 16 0.8 0 15 0 0 15 15 15 17 17 17 23.11 67.5 32.47 0 1 2 Whitelist PAEN-IT 1 0.62 0 0 0 0.84 1 High confidence PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine Canonical without polyploidization 22 0.26 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 19 NA NA 0 0 42 0 0 0 0 0 NA 0 NA 0.01 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PAEN-IT NA 0 0.01 NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 20 NA NA 0 0 42 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.06 NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 21 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0968 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 1 No PAEN-IT ITNET-0968 PAEN 0.85 1.73 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52154 ITNET-0968 male alive C25.4 71 1062 1062 NA Included Panc-Endocrine PAEN IT 1 34.93 PAEN-IT::ITNET-0993 1 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 2 8748091 160901518 7 22 46 1 1 3 2 15 0.67 0 8 0 0 8 3 5 8 3 3 25.86 6.1 93.79 0 2 1 Whitelist PAEN-IT 0.68 0 0 0 0.74 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 29 0.32 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 3 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 4 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 5 65500311 67281293 1 1 46 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 6 3 6 25.86 99.85 0.02 0 1 3 Whitelist PAEN-IT 0.62 0 0 NA 0.59 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 6 84573766 152126103 1 10 46 1 0 1 1 7 0.8 0 3 0 0 NA NA NA NA NA NA 25.86 1.51 98.34 0 2 1 Whitelist PAEN-IT 0.68 0 0 0 0.84 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 13 0.14 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 7 124739991 156176266 2 3 46 1 1 0 0 1 0.57 0.04 3 0 0 NA NA NA 15 15 15 25.86 45.89 51.56 0 3 2 Whitelist PAEN-IT 0.62 0.13 0 0 0.64 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 5 0.05 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 8 NA NA 0 0 46 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.01 0 NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 9 NA NA 0 0 46 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 12 NA NA 0 0 46 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.9 NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 13 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 14 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 15 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 16 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 17 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 18 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 19 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 20 60444410 61466929 1 1 46 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 25.86 1.62 97.39 0 1 2 Whitelist PAEN-IT 0.62 0.5 NA NA 0.59 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 21 45395737 47233485 1 1 46 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 25.86 75.49 0 0 4 NA Whitelist PAEN-IT 0.62 0.68 NA NA 0.59 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 2 0.02 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 22 NA NA 0 0 46 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.67 NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-0993 X NA NA 0 0 46 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.91 NA NA NA 0 No PAEN-IT ITNET-0993 PAEN 0.85 2.06 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52155 ITNET-0993 male alive C25.4 60 757 757 NA Included Panc-Endocrine PAEN IT 1 24.9 PAEN-IT::ITNET-1000 1 NA NA 0 0 8 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.32 NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 2 102045932 102533399 1 1 8 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 48.94 0 99.9 0 2 NA Whitelist PAEN-IT 0.62 0.75 NA NA 0.59 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 2 0.12 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 5 NA NA 0 0 8 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.65 NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 6 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 9 8881288 135479092 1 2 8 1 1 0 0 0 0.57 0.04 3 NA 0.04 NA NA NA 4 3 4 48.94 31.3 68 0 2 3 Whitelist PAEN-IT 0.68 0.13 NA 0.04 0.64 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 4 0.25 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1000 X 31300408 33083989 1 2 8 2 0 0 0 0 0.11 0.06 4 NA 0 4 4 4 7 7 7 48.94 100 0 0 0 1 Whitelist PAEN-IT 0.54 0.18 NA 0 0.48 0 No PAEN-IT ITNET-1000 PAEN 0.87 2.41 Panc-Endocrine NA 4 0.25 NA 3 PAEN-IT DO52156 ITNET-1000 male alive C25.4 53 1007 1007 NA Included Panc-Endocrine PAEN IT 1 33.12 PAEN-IT::ITNET-1027 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1027 X 31906363 33495420 1 1 1 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 54.92 100 0 0 0 1 Whitelist PAEN-IT 0.62 0.16 NA NA 0.59 0 No PAEN-IT ITNET-1027 PAEN 0.93 1.41 Panc-Endocrine NA 2 1 NA 2 PAEN-IT DO52159 ITNET-1027 male alive C25.4 50 986 986 NA Included Panc-Endocrine PAEN IT 1 32.43 PAEN-IT::ITNET-1047 1 65279582 65638983 15 18 245 5 7 2 1 3 0.11 0 5 0 0 5 3 5 46 8 8 46.2 22.4 77.6 0 7 8 Whitelist PAEN-IT 0.62 0 0 0 0.48 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 33 0.07 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 2 26791743 241217454 1 6 245 0 4 0 1 1 0.04 0 7 0 0 7 5 7 7 5 5 46.2 28.46 71.45 1 2 1 Whitelist PAEN-IT 0.25 0.01 0 0 0.36 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 11 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 3 42703121 132237065 1 9 245 0 6 0 0 3 0 0.13 7 0 0 7 7 7 7 7 7 46.2 0.39 99.57 0 2 3 Whitelist PAEN-IT 0.41 0.33 0 0 0.03 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 15 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 4 6613483 181260851 1 4 245 0 4 0 0 0 0.01 0 4 0 0 4 4 4 5 5 5 46.2 99.49 0.36 0 1 2 Whitelist PAEN-IT 0.21 0.01 0 0 0.16 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 8 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 5 171387702 175798782 3 3 245 0 1 2 0 0 0.3 0.43 5 0 0 5 5 5 14 9 9 46.2 96.41 0.9 0 1 2 Whitelist PAEN-IT 0.62 0.68 0 0 0.59 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 6 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 6 167845681 170588059 10 10 245 3 2 2 3 0 0.94 0.35 5 0 0 5 3 5 12 7 7 46.2 44.63 55.23 0 1 0 Whitelist PAEN-IT 0.96 0.6 0 0 0.96 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 20 0.04 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 7 3143294 110310059 1 6 245 1 4 0 0 1 0.04 0.16 7 0 0 7 3 6 8 3 6 46.2 0.49 96.96 0 2 3 Whitelist PAEN-IT 0.54 0.36 0 0 0.36 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 11 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 8 3799469 103934793 1 8 245 1 5 0 0 2 0.01 0.38 3 0 0 NA NA NA NA NA NA 46.2 0.33 99.66 0 2 3 Whitelist PAEN-IT 0.54 0.63 0 0 0.19 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 14 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 9 29933578 36500038 9 9 245 2 3 2 2 0 0.95 0 18 0 0 18 4 7 30 5 6 46.2 33.09 64.37 0 2 1 Whitelist PAEN-IT 0.97 0 0 0 0.97 0 Low confidence PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine With other complex events 18 0.04 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 10 5321524 110651105 1 6 245 2 2 0 0 2 0.26 0.22 3 0 0 NA NA NA NA NA NA 46.2 99.7 0.12 0 1 2 Whitelist PAEN-IT 0.93 0.46 0 0 0.59 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 10 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 11 48710192 61425002 9 10 245 4 2 2 1 1 0.55 0 10 0 0 10 6 10 27 6 9 46.2 86.59 9.49 8 2 3 Whitelist PAEN-IT 0.86 0 0 0 0.64 0 Low confidence PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine Canonical without polyploidization 19 0.04 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 12 12060716 110875260 1 4 245 0 4 0 0 0 0.01 0.13 8 0 0 8 8 8 11 11 11 46.2 1 98.91 0 2 3 Whitelist PAEN-IT 0.21 0.32 0 0 0.16 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 8 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 13 22710535 41680062 1 4 245 0 2 2 0 0 0.26 0.86 7 0 0 7 4 7 8 4 4 46.2 79.14 20.86 0 1 2 Whitelist PAEN-IT 0.62 0.99 0 0 0.59 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 8 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 14 26558117 102625704 1 7 245 0 5 0 0 2 0 0.36 7 0 0 7 7 7 10 10 10 46.2 2.82 96.42 0 2 3 Whitelist PAEN-IT 0.47 0.61 0 0 0.07 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 12 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 15 41036020 41385438 3 3 245 1 2 0 0 0 0.3 0.56 1 0 0 NA NA NA NA NA NA 46.2 99.86 0.14 0 1 NA Whitelist PAEN-IT 0.62 0.78 0 0 0.59 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 6 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 16 85305972 85785500 2 4 245 0 2 0 0 2 0.11 0 4 0 0 4 0 3 16 7 9 46.2 84.97 14.94 0 1 2 Whitelist PAEN-IT 0.68 0 0 0 0.48 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 6 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 17 26760972 80440421 1 10 245 1 4 0 1 4 0.11 0.05 11 0 0 11 11 11 13 11 11 46.2 64.57 28.86 0 2 1 Whitelist PAEN-IT 0.54 0.15 0 0 0.48 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 16 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 18 2644078 60843988 1 10 245 1 3 0 0 6 0.11 0.11 10 0 0 10 5 8 10 5 5 46.2 94.35 1.01 8 3 1 Whitelist PAEN-IT 0.54 0.28 0 0 0.48 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 14 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 19 18243239 42492664 1 3 245 0 3 0 0 0 0.03 0.82 3 0 0 NA NA NA NA NA NA 46.2 0.35 99.21 0 2 3 Whitelist PAEN-IT 0.41 0.96 0 0 0.33 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 6 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 20 22252276 22794987 4 5 245 0 2 1 1 1 0.57 0.05 3 0 0 NA NA NA 9 9 9 46.2 3.7 96.06 0 2 3 Whitelist PAEN-IT 0.93 0.15 0 0 0.64 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 9 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 21 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 22 23698892 47225509 1 6 245 0 3 0 0 3 0.03 0 5 0 0 5 4 5 11 4 5 46.2 39.96 60.04 0 1 2 Whitelist PAEN-IT 14 0.25 0 0 0 0.33 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 9 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1047 X NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1047 PAEN 0.9 1.64 Panc-Endocrine NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 2 PAEN-IT DO52161 ITNET-1047 male deceased C25.4 69 3 3 NA Included Panc-Endocrine PAEN IT 1 0.1 PAEN-IT::ITNET-1050 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 0 0 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1050 X 32765047 33315528 2 2 2 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA NA NA NA 42.85 0.25 99.75 0 2 1 Whitelist PAEN-IT 0.54 0.01 NA 0 0.48 0 No PAEN-IT ITNET-1050 PAEN 0.83 2.64 Panc-Endocrine NA 4 1 NA 3 PAEN-IT DO52162 ITNET-1050 female alive C25.4 20 956 956 NA Included Panc-Endocrine PAEN IT 1 31.45 PAEN-IT::ITNET-1053 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 3 17009034 17068427 1 1 17 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 55.73 99.95 0 0 0 1 Whitelist PAEN-IT 0.62 1 NA NA 0.59 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 4 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 1 NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 9 NA NA 0 0 17 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA 0.74 NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 11 81885707 82557089 1 1 17 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 55.73 99.57 0 0 0 1 Whitelist PAEN-IT 0.62 0.14 NA NA 0.59 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 12 108167653 129977325 2 8 17 0 1 0 1 6 0.57 0 7 0 0 7 7 7 7 7 7 55.73 13.02 86.9 0 2 1 Whitelist PAEN-IT 0.87 0 0 0 0.64 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 10 0.29 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 14 37993698 77268387 1 1 17 1 0 0 0 0 0.39 0.42 1 NA NA NA NA NA NA NA NA 55.73 0 99.08 0 2 NA Whitelist PAEN-IT 0.62 0.67 NA NA 0.59 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 18 33926472 34262973 1 1 17 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 55.73 0 99.96 0 2 NA Whitelist PAEN-IT 0.62 0.62 NA NA 0.59 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 2 0.06 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 20 NA NA 0 0 17 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PAEN-IT NA 0 NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PAEN-IT NA NA NA NA NA 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 0 0 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PAEN-IT::ITNET-1053 X 32052880 33608200 1 2 17 1 1 0 0 0 0.57 0.21 3 NA 0 NA NA NA NA NA NA 55.73 99.98 0.02 0 1 2 Whitelist PAEN-IT 0.68 0.44 NA 0 0.64 0 No PAEN-IT ITNET-1053 PAEN 0.78 1.41 Panc-Endocrine NA 4 0.12 NA 2 PAEN-IT DO52164 ITNET-1053 male alive C25.4 66 803 803 NA Included Panc-Endocrine PAEN IT 1 26.41 PBCA-DE::ICGC_MB1 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 2 NA NA 0 0 4 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.13 NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 3 37097405 38852915 1 1 4 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 6.09 0.89 99.06 0 2 11 Whitelist PBCA-DE 0.62 0.49 NA NA 0.59 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 9 98099985 98766747 1 1 4 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA 4 4 4 6.09 51.26 48.03 0 1 NA Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 21 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB1 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB1 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35538 ICGC_MB1 female alive C71 6 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB101 1 97571473 99750441 2 4 27 0 0 2 2 0 0.26 0 9 0 0 9 4 5 19 4 5 9.51 47.09 52.91 0 3 4 Whitelist PBCA-DE 0.62 0 0 0 0.59 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 8 0.15 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 2 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 3 NA NA 0 0 27 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 4 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 5 92711131 150863017 1 4 27 0 0 1 0 3 0.39 0.02 2 0 0 NA NA NA NA NA NA 9.51 16.49 83.38 0 1 2 Whitelist PBCA-DE 0.62 0.1 0 0 0.59 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 5 0.09 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 6 88136790 105074687 1 1 27 1 0 0 0 0 0.39 0.68 1 NA NA NA NA NA NA NA NA 9.51 0 99.83 0 2 NA Whitelist PBCA-DE 0.62 0.88 NA NA 0.59 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 7 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 8 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 9 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 11 NA NA 0 0 27 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 12 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 13 NA NA 0 0 27 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.2 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 14 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 17 15865267 30685738 2 2 27 0 1 0 1 0 0.57 0.01 9 0 0 9 3 3 11 3 4 9.51 27.23 68.32 0 7 1 Whitelist PBCA-DE 0.68 0.03 0 0 0.64 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 18 NA NA 0 0 27 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 19 NA NA 0 0 27 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.66 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 22 NA NA 0 0 27 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.14 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB101 X NA NA 0 0 27 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.64 NA NA NA 0 No PBCA-DE ICGC_MB101 PBCA 0.46 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48909 ICGC_MB101 female alive C71 39 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 2 118452847 124097009 2 2 4 0 0 1 1 0 0.57 0.04 4 NA 0 4 4 4 5 5 5 9.47 2.2 97.78 0 2 3 Whitelist PBCA-DE 0.68 0.13 NA 0 0.64 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 4 0.5 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 5 NA NA 0 0 4 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.46 NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 9 130562034 132729841 1 1 4 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 9.47 1.54 97.79 0 1 2 Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB102 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB102 PBCA 0.95 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48911 ICGC_MB102 female alive C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 1 16035779 38691375 1 1 9 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 90.17 100 0 0 3 4 Whitelist PBCA-DE 0.62 0.76 NA NA 0.59 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 2 0.11 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 6 13610241 31060086 1 1 9 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 90.17 99.85 0 0 4 NA Whitelist PBCA-DE 0.62 0.68 NA NA 0.59 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 2 0.11 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 7 NA NA 0 0 9 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 9 NA NA 0 0 9 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.55 NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 12 NA NA 0 0 9 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.6 NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 14 38914287 101064854 1 4 9 1 0 0 1 2 0.57 0 7 0 0 7 4 7 9 6 6 90.17 98.36 0.72 0 3 4 Whitelist PBCA-DE 0.62 0 0 0 0.64 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 6 0.33 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 18 61503032 71174146 1 2 9 0 0 1 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 90.17 99.96 0 0 4 NA Whitelist PBCA-DE 0.68 0.01 NA NA 0.59 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 3 0.17 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB104 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB104 PBCA 0.83 3.84 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO48912 ICGC_MB104 male alive C71 35 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB106 1 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 2 220031092 223654956 4 4 12 0 2 1 1 0 0.57 0.01 5 0 0 5 5 5 5 5 5 94.66 99.88 0 0 3 5 Whitelist PBCA-DE 0.68 0.06 0 0 0.64 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 8 0.33 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 4 NA NA 0 0 12 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.14 NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 6 NA NA 0 0 12 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.76 NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 8 127960646 144596505 2 2 12 0 0 1 1 0 0.57 0.12 4 NA 0 4 4 4 5 5 5 94.66 99.99 0 0 5 8 Whitelist PBCA-DE 0.68 0.31 NA 0 0.64 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 4 0.17 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 9 139474008 139677444 1 1 12 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 94.66 99.28 0 0 4 6 Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 2 0.08 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 14 74654027 74821843 1 4 12 0 1 0 0 3 0.39 0 2 NA 0 NA NA NA NA NA NA 94.66 69.7 29.38 0 2 6 Whitelist PBCA-DE 0.68 0 NA 0 0.59 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 5 0.21 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB106 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB106 PBCA 0.9 3.83 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35733 ICGC_MB106 male deceased C71 3 304 304 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB110 1 15891894 241247299 1 6 77 0 1 0 1 4 0.57 0.39 2 0.02 0 NA NA NA NA NA NA 91.1 99.96 0 0 4 5 Whitelist PBCA-DE 0.68 0.64 0.02 0 0.64 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 8 0.05 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 2 4474169 5874111 1 1 77 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 91.1 99.89 0 0 4 5 Whitelist PBCA-DE 0.62 0.08 NA NA 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 2 0.01 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 3 NA NA 0 0 77 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.15 NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 4 68330693 107969187 1 6 77 1 3 1 1 0 0.57 0.65 6 0 0 6 3 6 7 3 3 91.1 99.8 0 0 6 7 Whitelist PBCA-DE 0.68 0.86 0 0 0.64 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 12 0.08 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 5 121695469 121880196 2 2 77 0 1 1 0 0 0.57 1 3 0 0 NA NA NA NA NA NA 91.1 99.86 0 0 4 5 Whitelist PBCA-DE 0.68 1 0 0 0.64 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 4 0.03 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 6 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 7 91263547 98311509 1 1 77 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 91.1 99.77 0 0 6 10 Whitelist PBCA-DE 0.62 0.32 NA NA 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 2 0.01 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 8 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 9 135440337 135712137 2 2 77 0 2 0 0 0 0.11 1 2 0 0 NA NA NA 5 5 5 91.1 99.84 0 0 4 5 Whitelist PBCA-DE 0.54 1 0.01 0 0.48 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 4 0.03 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 10 NA NA 0 0 77 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.51 NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 11 99189781 99228722 1 1 77 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 91.1 99.43 0 0 3 4 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 2 0.01 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 12 93341032 93820858 1 1 77 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 91.1 99.92 0 0 5 6 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 2 0.01 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 13 87775279 95191660 2 2 77 1 1 0 0 0 0.57 0.02 2 0 0 NA NA NA 5 5 5 91.1 97.22 0 0 3 4 Whitelist PBCA-DE 0.68 0.07 0 0 0.64 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 4 0.03 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 14 NA NA 0 0 77 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.76 NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 15 67491307 67556284 1 4 77 1 0 0 1 2 0.57 0 3 0 0 NA NA NA 5 3 3 91.1 99.89 0 0 4 5 Whitelist PBCA-DE 0.68 0 0 0 0.64 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 6 0.04 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 16 275259 87888760 22 24 77 5 5 6 6 2 0.98 0 18 0 0 18 9 16 19 9 9 91.1 99.91 0 2 4 3 Whitelist PBCA-DE 0.97 0 0 0 0.99 1 High confidence PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo With other complex events 46 0.3 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 17 25769864 25864396 1 1 77 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 91.1 99.98 0 0 7 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 2 0.01 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 18 44737806 45981267 5 6 77 0 2 0 3 1 0.14 0 7 0 0 7 4 5 9 4 4 91.1 99.96 0 0 5 8 Whitelist PBCA-DE 0.54 0 0 0 0.59 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 11 0.07 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 19 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 20 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 21 NA NA 0 0 77 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.83 NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 22 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB110 X NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB110 PBCA 0.92 4.18 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35739 ICGC_MB110 female alive C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 1 220951925 221712997 1 1 5 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 41.34 0.52 99.48 0 2 3 Whitelist PBCA-DE 0.62 0.02 NA NA 0.59 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 16 5425256 5784165 1 1 5 0 1 0 0 0 0.39 0.01 2 NA 0 NA NA NA NA NA NA 41.34 0.4 99.49 0 2 3 Whitelist PBCA-DE 0.62 0.03 NA 0 0.59 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 17 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.03 NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB111 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB111 PBCA 0.87 2.34 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35741 ICGC_MB111 female alive C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 10 69534555 69630629 1 1 1 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 12.19 0 99.82 0 2 NA Whitelist PBCA-DE 0.62 0.15 NA NA 0.59 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB114 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB114 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35747 ICGC_MB114 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 2 NA NA 0 0 5 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.03 NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 7 10529697 10539908 1 3 5 0 1 0 0 2 0.39 0 1 NA 0 NA NA NA NA NA NA 9.78 6.59 93.18 0 2 NA Whitelist PBCA-DE 0.62 0.01 NA 0 0.59 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 4 0.4 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 8 125821274 125939147 1 1 5 0 1 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 9.78 0 99.99 0 2 NA Whitelist PBCA-DE 0.62 0.46 NA NA 0.59 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB118 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB118 PBCA 0.9 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35753 ICGC_MB118 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 1 243578814 243643181 1 2 6 0 1 0 1 0 0.57 0.07 3 NA 0 NA NA NA NA NA NA 7.53 0.01 99.99 0 2 3 Whitelist PBCA-DE 0.68 0.22 NA 0 0.64 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 3 NA NA 0 0 6 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 9 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 17 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.05 NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB119 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB119 PBCA 0.85 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35755 ICGC_MB119 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB12 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 3 103104786 103174015 1 1 3 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 5.09 0 99.86 0 2 NA Whitelist PBCA-DE 0.62 0.42 NA NA 0.59 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 4 83930848 85649905 1 1 3 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 5.09 0.9 99.09 0 1 2 Whitelist PBCA-DE 0.62 0.41 NA NA 0.59 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 15 NA NA 0 0 3 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB12 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB12 PBCA 0.56 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35547 ICGC_MB12 male alive C71 3 1644 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 54.08 PBCA-DE::ICGC_MB121 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 4 NA NA 0 0 4 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 5 134630957 134939679 1 2 4 1 1 0 0 0 0.57 0.02 3 NA 0 NA NA NA NA NA NA 63.19 74.57 25.29 0 2 3 Whitelist PBCA-DE 0.68 0.09 NA 0 0.64 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 4 0.5 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 8 131253088 131399627 1 1 4 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 3 4 63.19 99.99 0 0 1 4 Whitelist PBCA-DE 0.62 0.41 NA NA 0.59 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 2 0.25 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB121 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB121 PBCA 0.51 3.76 CNS-Medullo NA 0 0 NA 6 PBCA-DE DO35757 ICGC_MB121 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 1 79527217 112932628 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.79 13.4 86.59 0 1 2 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 2 19413121 19424275 1 1 28 1 0 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 5.79 0 99.99 0 2 NA Whitelist PBCA-DE 0.62 0.54 0 NA 0.59 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 3 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 4 143055464 169248377 2 2 28 0 0 1 1 0 0.57 0.71 1 NA 0 NA NA NA NA NA NA 5.79 0 99.99 0 2 NA Whitelist PBCA-DE 0.68 0.9 NA 0 0.64 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 5 NA NA 0 0 28 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.89 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 7 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 9 NA NA 0 0 28 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.02 0 NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 11 86660959 134324064 1 1 28 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.79 35.3 64.26 0 1 2 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 12 72813528 75562264 2 2 28 0 0 1 1 0 0.57 0.38 1 NA 0 NA NA NA NA NA NA 5.79 0.07 99.84 0 2 NA Whitelist PBCA-DE 0.68 0.63 NA 0 0.64 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 13 NA NA 0 0 28 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.84 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 15 NA NA 0 0 28 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.04 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 16 NA NA 0 0 28 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.03 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 17 NA NA 0 0 28 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 18 33237542 52017013 2 2 28 0 0 1 1 0 0.57 0.17 1 NA 0 NA NA NA NA NA NA 5.79 0 99.96 0 2 NA Whitelist PBCA-DE 0.68 0.39 NA 0 0.64 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 20 NA NA 0 0 28 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.31 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 21 NA NA 0 0 28 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.15 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 22 NA NA 0 0 28 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.15 NA NA NA 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB125 X 19306126 81431540 2 2 28 0 0 1 1 0 0.57 0.65 1 NA 0 NA NA NA NA NA NA 5.79 0 99.78 0 2 NA Whitelist PBCA-DE 0.68 0.86 NA 0 0.64 0 No PBCA-DE ICGC_MB125 PBCA 0.92 1.94 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO48914 ICGC_MB125 female C71 19 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 2 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.24 NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB126 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB126 PBCA 0.92 3.95 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48915 ICGC_MB126 female C71 31 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB129 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 2 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 3 NA NA 0 0 12 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.43 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 5 121641570 121738421 1 2 12 1 1 0 0 0 0.57 0.01 2 0 0 NA NA NA 6 3 3 90.51 88.22 11.64 0 4 5 Whitelist PBCA-DE 0.68 0.03 0 0 0.64 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 4 0.17 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 6 NA NA 0 0 12 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 7 19662614 41778935 1 1 12 0 0 0 1 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 90.51 99.77 0 0 6 NA Whitelist PBCA-DE 0.62 0.09 NA NA 0.59 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 2 0.08 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 8 NA NA 0 0 12 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.71 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 12 1176801 1202024 1 1 12 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 90.51 99.43 0 0 5 NA Whitelist PBCA-DE 0.62 0.28 NA NA 0.59 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 2 0.08 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 17 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 18 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 20 NA NA 0 0 12 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.46 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 21 NA NA 0 0 12 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.33 NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB129 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB129 PBCA 0.98 3.99 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35841 ICGC_MB129 male alive C71 16 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB131 1 106161714 107286711 1 1 39 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 3 3 15.82 29.85 70.09 0 1 2 Whitelist PBCA-DE 0.62 0.62 NA NA 0.59 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 2 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 3 38417904 38895251 3 9 39 1 0 0 2 6 0.3 0 13 0 0 13 13 13 18 14 14 15.82 0.34 99.61 0 4 49 Whitelist PBCA-DE 8 0.62 0 0 0 0.59 1 High confidence PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo After polyploidization 12 0.15 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 4 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 5 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 6 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 8 22113923 128760777 13 19 39 1 6 4 2 6 0.21 0 25 0 0 25 5 6 26 5 6 15.82 1.32 98.67 0 4 49 Whitelist PBCA-DE 3 0.62 0 0 0 0.59 1 Low confidence PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo With other complex events 32 0.41 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 9 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 10 114695530 114771893 1 1 39 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.82 0.06 99.77 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 11 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 12 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 16 78740763 78940321 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 15.82 0.22 99.69 0 1 2 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 17 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 19 41960683 42889382 1 1 39 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 15.82 1.57 98.26 0 1 2 Whitelist PBCA-DE 0.62 0.77 NA NA 0.59 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 20 14017393 14836552 1 1 39 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 15.82 1.3 97.72 0 1 2 Whitelist PBCA-DE 0.62 0.8 NA NA 0.59 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB131 X NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB131 PBCA 0.96 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35845 ICGC_MB131 male deceased C71 5 244 244 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB132 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 11 15806250 50519323 1 1 1 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.29 25.71 73.85 0 1 2 Whitelist PBCA-DE 0.62 0.16 NA NA 0.59 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB132 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB132 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35847 ICGC_MB132 female alive C71 5 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 1 217713460 217752763 1 1 2 0 0 0 1 0 0.39 0.01 2 NA NA NA NA NA 5 3 3 62.8 75.35 24.61 0 4 5 Whitelist PBCA-DE 0.62 0.03 NA NA 0.59 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 2 0.5 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 17 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB134 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB134 PBCA 0.96 2.61 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35763 ICGC_MB134 female alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 15 43097628 43296079 1 2 6 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 12.71 0 99.87 0 2 NA Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 17 26117822 26132921 1 1 6 0 1 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 12.71 99.98 0 0 3 NA Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 20 NA NA 0 0 6 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.31 NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB139 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB139 PBCA 0.98 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35857 ICGC_MB139 male alive C71 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB143 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 2 NA NA 0 0 10 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.81 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 3 7307351 10337863 1 1 10 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 5.86 1.53 98.44 0 1 2 Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 5 NA NA 0 0 10 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 8 13985821 15589527 1 1 10 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 5.86 1.1 98.9 0 1 2 Whitelist PBCA-DE 0.62 0.25 NA NA 0.59 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 9 NA NA 0 0 10 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.58 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 10 NA NA 0 0 10 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 11 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 13 NA NA 0 0 10 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 16 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.47 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 18 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB143 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB143 PBCA 0.48 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48917 ICGC_MB143 female C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.42 NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.36 NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB144 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB144 PBCA 0.92 3.98 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48918 ICGC_MB144 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 1 192974986 194162646 1 1 61 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 3 3 86.08 99.52 0.48 0 2 4 Whitelist PBCA-DE 0.62 0.25 NA NA 0.59 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 2 121742847 140644237 13 16 61 4 3 3 3 3 0.97 0 20 0 0 20 3 4 30 3 5 86.08 98.63 1.28 0 3 49 Whitelist PBCA-DE 0.95 0 0 0 0.98 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 29 0.24 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 3 77996143 177903998 1 3 61 2 0 0 0 1 0.11 0.32 7 0 0 7 3 4 9 3 4 86.08 54.92 41.93 0 2 8 Whitelist PBCA-DE 0.62 0.57 0 0 0.48 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 5 0.04 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 4 43575499 43683793 1 1 61 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 86.08 99.9 0 0 3 4 Whitelist PBCA-DE 0.62 0.41 NA NA 0.59 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 5 14411819 29730411 2 5 61 0 1 1 0 3 0.57 0.01 4 0 0 4 0 3 15 0 3 86.08 97.07 0 0 49 4 Whitelist PBCA-DE 0.68 0.06 0 0 0.64 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 7 0.06 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 6 NA NA 0 0 61 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.51 NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 7 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 8 NA NA 0 0 61 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.78 NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 9 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 10 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 11 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 12 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 13 76550487 94569888 1 3 61 2 0 0 1 0 0.3 0.16 4 0 0 4 4 4 8 5 5 86.08 100 0 0 7 9 Whitelist PBCA-DE 0.62 0.36 0 0 0.59 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 14 97234277 97410249 1 2 61 2 0 0 0 0 0.11 0.72 4 NA 0 4 4 4 5 5 5 86.08 98.97 0.11 0 2 4 Whitelist PBCA-DE 0.54 0.9 NA 0 0.48 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 15 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 16 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 17 17334828 78175336 6 8 61 0 0 2 4 2 0.06 0 16 0 0 16 7 11 19 7 7 86.08 59.04 36.53 0 2 4 Whitelist PBCA-DE 0.62 0 0 0 0.48 1 High confidence PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo With other complex events 14 0.11 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 18 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 19 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 20 3862205 7313747 2 2 61 0 1 0 1 0 0.57 0.01 5 0 0 5 0 3 11 3 3 86.08 84.87 7.47 0 19 11 Whitelist PBCA-DE 0.68 0.05 0 0 0.64 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 21 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 22 NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB145 X NA NA 0 0 61 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB145 PBCA 0.94 4.27 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48919 ICGC_MB145 male C71 13 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 1 164214731 249128908 1 2 10 0 2 0 0 0 0.11 0 3 0.14 0 NA NA NA 8 3 6 47.32 93.36 6.59 0 3 4 Whitelist PBCA-DE 0.54 0 0.15 0 0.48 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 4 0.2 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 2 23893570 97416177 1 2 10 0 0 0 1 1 0.39 0.2 2 NA NA NA NA NA NA NA NA 47.32 37.19 60.11 0 2 3 Whitelist PBCA-DE 0.54 0.43 NA NA 0.59 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 3 0.15 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 7 NA NA 0 0 10 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.67 NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 10 89608009 89636167 1 1 10 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 47.32 99.82 0 0 1 NA Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 12 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 15 NA NA 0 0 10 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 17 27183845 27529332 1 1 10 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 47.32 100 0 0 3 4 Whitelist PBCA-DE 0.62 0.48 NA NA 0.59 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 21 NA NA 0 0 10 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.03 NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB146 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB146 PBCA 0.71 2.21 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48920 ICGC_MB146 female C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB151 1 NA NA 0 0 6 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 3 2942459 42833318 3 3 6 1 1 0 1 0 0.8 0 3 0 0 NA NA NA NA NA NA 25.98 99.99 0 0 3 5 Whitelist PBCA-DE 0.87 0 0 0 0.84 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 6 0.5 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 6 NA NA 0 0 6 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.56 NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB151 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB151 PBCA 0.98 2.15 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48922 ICGC_MB151 male deceased C71 4 761 761 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 25.03 PBCA-DE::ICGC_MB152 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 3 15159977 15442114 1 1 6 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 29.02 0.14 99.69 0 1 2 Whitelist PBCA-DE 0.62 0.61 NA NA 0.59 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 4 NA NA 0 0 6 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.18 NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 8 112394931 112405648 1 1 6 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 29.02 33.34 66.66 0 3 NA Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 17 NA NA 0 0 6 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 0 NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB152 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB152 PBCA 0.9 2.2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48923 ICGC_MB152 female deceased C71 10 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB153 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 6 NA NA 0 0 6 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.56 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 14 NA NA 0 0 6 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 16 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 17 39243719 39263729 1 1 6 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 10.23 54.06 45.94 0 3 NA Whitelist PBCA-DE 0.62 0.05 NA NA 0.59 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 19 NA NA 0 0 6 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.29 NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB153 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB153 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48924 ICGC_MB153 male alive C71 3 578 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::ICGC_MB154 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 12 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 19 NA NA 0 0 3 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.18 NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB154 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB154 PBCA 1 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48925 ICGC_MB154 male alive C71 4 61 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 2.01 PBCA-DE::ICGC_MB157 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 4 NA NA 0 0 5 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 6 NA NA 0 0 5 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.51 NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 10 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 13 85678064 86214492 1 2 5 1 1 0 0 0 0.57 0.01 2 NA 0 NA NA NA NA NA NA 35.57 0.42 99.58 0 2 3 Whitelist PBCA-DE 0.68 0.05 NA 0 0.64 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 4 0.4 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB157 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB157 PBCA 0.6 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48927 ICGC_MB157 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB16 1 NA NA 0 0 7 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 3 NA NA 0 0 7 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 4 NA NA 0 0 7 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 7 NA NA 0 0 7 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.02 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 8 NA NA 0 0 7 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.15 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 9 NA NA 0 0 7 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 10 18227383 110149843 1 2 7 1 0 0 0 1 0.39 0.04 2 NA NA NA NA NA NA NA NA 11.61 36.45 63.4 0 1 2 Whitelist PBCA-DE 0.68 0.13 NA NA 0.59 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 3 0.21 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 16 NA NA 0 0 7 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB16 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB16 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35551 ICGC_MB16 male deceased C71 3 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB160 1 NA NA 0 0 16 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.62 NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 2 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 8 41002272 123551081 6 6 16 0 1 2 3 0 0.34 0 17 0 0 17 9 9 25 11 11 84.47 81.16 18.72 0 3 4 Whitelist PBCA-DE 0.62 0 0 0 0.59 1 High confidence PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo With other complex events 12 0.38 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 12 18996963 28448054 1 2 16 0 2 0 0 0 0.11 0.04 3 0 0 NA NA NA 4 4 4 84.47 99.98 0 0 4 5 Whitelist PBCA-DE 0.54 0.13 0 0 0.48 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 4 0.12 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 13 NA NA 0 0 16 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.68 NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 17 NA NA 0 0 16 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.2 NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB160 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB160 PBCA 0.67 3.9 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48929 ICGC_MB160 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 1 NA NA 0 0 17 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 0 NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 2 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 3 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 4 70300211 70328309 1 1 17 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 60.32 99.99 0 0 3 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 2 0.06 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 5 59246103 59272797 1 1 17 0 0 1 0 0 0.39 0 2 0 NA NA NA NA 6 3 3 60.32 28.84 71.02 0 2 3 Whitelist PBCA-DE 0.62 0.02 0 NA 0.59 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 2 0.06 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 6 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 7 NA NA 0 0 17 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.05 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 8 NA NA 0 0 17 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.81 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 14 NA NA 0 0 17 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.06 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 16 NA NA 0 0 17 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 18 NA NA 0 0 17 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.62 NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB161 X 34084597 34634521 1 2 17 0 2 0 0 0 0.11 0.21 3 NA 0 NA NA NA NA NA NA 60.32 0.02 99.98 0 2 3 Whitelist PBCA-DE 0.54 0.44 NA 0 0.48 0 No PBCA-DE ICGC_MB161 PBCA 0.9 2.66 CNS-Medullo NA 4 0.12 NA 3 PBCA-DE DO48930 ICGC_MB161 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 1 4018515 182001295 1 3 14 0 0 0 1 2 0.39 0 1 0 0.1 NA NA NA NA NA NA 2.59 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.02 0 0.1 0.59 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 4 0.14 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 2 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 3 NA NA 0 0 14 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.5 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 4 NA NA 0 0 14 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.05 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 5 NA NA 0 0 14 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 6 NA NA 0 0 14 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.8 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 7 NA NA 0 0 14 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.13 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 8 NA NA 0 0 14 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.76 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 9 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 10 NA NA 0 0 14 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.73 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 13 NA NA 0 0 14 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 15 NA NA 0 0 14 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.58 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 16 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.57 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 20 NA NA 0 0 14 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.13 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 22 NA NA 0 0 14 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.36 NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB163 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB163 PBCA 0.98 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48932 ICGC_MB163 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB164 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 3 NA NA 0 0 12 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.8 NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 4 NA NA 0 0 12 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.79 NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 5 147539241 147678285 4 5 12 1 2 1 0 1 0.57 0 4 0 0 4 4 4 4 4 4 17.92 18.27 81.59 0 1 2 Whitelist PBCA-DE 0.93 0 0 0 0.64 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 9 0.38 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 14 22514057 68345395 1 2 12 0 0 2 0 0 0.11 0.05 1 NA 0 NA NA NA NA NA NA 17.92 99.08 0 0 3 NA Whitelist PBCA-DE 0.54 0.17 NA 0 0.48 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 4 0.17 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 16 61687936 61726320 1 1 12 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 17.92 0.04 99.96 0 2 3 Whitelist PBCA-DE 0.62 0.14 NA NA 0.59 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 2 0.08 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 17 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 22 20059532 31130356 1 1 12 0 0 1 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 17.92 100 0 0 3 NA Whitelist PBCA-DE 0.62 0.33 NA NA 0.59 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 2 0.08 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB164 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB164 PBCA 0.99 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48934 ICGC_MB164 male alive C71 4 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB165 1 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 2 111074 18111365 30 30 98 8 8 9 5 0 0.75 0 41 0 0 41 13 22 42 13 13 29.94 4.31 95.56 5 2 1 Whitelist PBCA-DE 0.86 0 0 0 0.83 1 High confidence PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo With other complex events 60 0.31 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 3 170470986 170616592 1 1 98 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 29.94 0.07 99.92 0 2 3 Whitelist PBCA-DE 0.62 0.06 NA NA 0.59 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 2 0.01 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 4 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 5 14327 179565981 66 66 98 17 17 13 19 0 0.76 0 11 0 0 11 11 11 11 11 11 29.94 1.97 97.89 0 2 1 Whitelist PBCA-DE 0.87 0 0 0 0.84 1 High confidence PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo Canonical without polyploidization 132 0.67 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 6 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 7 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 8 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 9 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 10 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 11 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 12 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 13 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 14 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 15 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 16 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 17 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 18 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 19 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 20 35965360 36274643 1 1 98 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 29.94 0 99.03 0 2 NA Whitelist PBCA-DE 0.62 0.9 NA NA 0.59 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 2 0.01 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 21 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 22 NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB165 X NA NA 0 0 98 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB165 PBCA 0.39 1.87 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48935 ICGC_MB165 male alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 1 247526980 247546228 1 1 7 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 54.42 99.96 0 0 3 4 Whitelist PBCA-DE 0.62 0.69 NA NA 0.59 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 2 0.14 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 2 NA NA 0 0 7 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.7 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.64 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 5 NA NA 0 0 7 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.62 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.55 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 9 NA NA 0 0 7 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 10 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 21 17048163 18874470 1 2 7 0 1 1 0 0 0.57 0 6 0 0 6 3 6 7 3 3 54.42 77.35 0 0 4 5 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 4 0.29 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB166 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB166 PBCA 0.95 2.51 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48936 ICGC_MB166 male alive C71 7 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 2 41732930 42060894 1 1 22 0 1 0 0 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 21.41 0.13 99.77 0 3 NA Whitelist PBCA-DE 0.62 0.9 NA NA 0.59 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 4 2881699 2961396 2 2 22 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 21.41 0.33 99.65 0 2 NA Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 4 0.09 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 7 82009588 82317200 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.41 99.77 0 0 3 4 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 9 133548084 133693834 3 7 22 1 0 2 0 4 0.3 0 3 0 0 NA NA NA NA NA NA 21.41 0.07 99.22 0 2 3 Whitelist PBCA-DE 0.96 0 0 0 0.59 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 10 0.23 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 12 117333835 121314073 1 1 22 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 6 3 3 21.41 60.01 39.91 0 4 5 Whitelist PBCA-DE 0.62 0 0 NA 0.59 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 13 71217261 71665208 1 1 22 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 21.41 0.39 99.61 0 2 3 Whitelist PBCA-DE 0.62 0.77 NA NA 0.59 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 20 NA NA 0 0 22 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB168 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB168 PBCA 0.97 2.11 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48937 ICGC_MB168 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 2 154471506 154946210 1 1 6 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 74.85 99.69 0.2 0 2 4 Whitelist PBCA-DE 0.62 0.66 NA NA 0.59 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 2 0.17 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 5 165672089 165870510 1 1 6 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA 5 5 5 74.85 99.86 0 0 4 5 Whitelist PBCA-DE 0.62 0.57 NA NA 0.59 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 2 0.17 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 8 2839240 5070821 1 1 6 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 4 4 74.85 99.99 0 0 4 6 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 2 0.17 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 15 55480954 55907615 1 1 6 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 74.85 99.9 0 0 1 3 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 2 0.17 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 21 37335904 37639969 1 1 6 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 74.85 77.65 0 0 4 5 Whitelist PBCA-DE 0.62 0.21 NA NA 0.59 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 2 0.17 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB170 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB170 PBCA 0.79 3.32 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48938 ICGC_MB170 male alive C71 21 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 3 37243200 195844269 1 2 5 1 1 0 0 0 0.57 0.04 2 NA 0 NA NA NA NA NA NA 12.92 7.56 92.39 0 1 2 Whitelist PBCA-DE 0.68 0.15 NA 0 0.64 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 4 0.4 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 6 32633296 32730239 1 1 5 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 12.92 0 99.85 0 2 NA Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 12 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 22 39425826 39445935 1 1 5 0 1 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 12.92 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.18 NA NA 0.59 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB174 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB174 PBCA 0.94 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48940 ICGC_MB174 male alive C71 16 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 6 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 17 NA NA 0 0 1 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.1 NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB175 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB175 PBCA 0.91 3.66 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48941 ICGC_MB175 male alive C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 1 NA NA 0 0 59 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.84 NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 2 15386910 16129075 51 54 59 14 9 14 14 3 0.69 0 21 0 0 21 4 7 23 4 7 18.03 0.31 99.59 0 59 29 Whitelist PBCA-DE 0.85 0 0 0 0.77 0 Low confidence PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo With other complex events 105 0.89 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 3 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 4 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 5 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 6 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 7 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 8 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 9 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 10 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 11 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 12 4321264 4515948 1 1 59 0 1 0 0 0 0.39 1 2 NA 0 NA NA NA NA NA NA 18.03 0.15 99.77 0 2 3 Whitelist PBCA-DE 0.62 1 NA 0 0.59 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 13 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 15 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 16 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 17 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 18 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB177 X NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB177 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48943 ICGC_MB177 female alive C71 6 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB18 1 NA NA 0 0 7 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 2 30862478 213268721 1 1 7 0 0 1 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 9.66 24.89 75 0 1 2 Whitelist PBCA-DE 0.62 0.7 NA NA 0.59 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 9 NA NA 0 0 7 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 10 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.52 NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 12 NA NA 0 0 7 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.14 NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 15 98620922 98640937 1 1 7 0 1 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 9.66 0.02 99.98 0 2 3 Whitelist PBCA-DE 0.62 0.4 NA NA 0.59 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 16 78862264 79141259 1 1 7 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 9.66 0.31 99.58 0 1 2 Whitelist PBCA-DE 0.62 0.39 NA NA 0.59 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB18 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB18 PBCA 0.99 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35553 ICGC_MB18 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB180 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 2 40036673 40054149 2 2 4 1 1 0 0 0 0.57 0.04 1 NA 0 NA NA NA NA NA NA 6.54 0 99.88 0 2 NA Whitelist PBCA-DE 0.68 0.13 NA 0 0.64 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 4 0.5 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 6 84822888 84841101 1 1 4 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 6.54 0 99.85 0 2 NA Whitelist PBCA-DE 0.62 0.45 NA NA 0.59 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 10 71869179 121265763 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 6.54 36.45 63.37 0 1 2 Whitelist PBCA-DE 0.62 0.39 NA NA 0.59 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB180 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB180 PBCA 0.96 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48945 ICGC_MB180 male alive C71 26 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB181 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 5 63000287 120810285 6 6 6 1 1 2 2 0 0.88 0 7 0 0 7 4 7 8 4 8 1.52 26.3 73.57 0 2 1 Whitelist PBCA-DE 0.93 0 0 0 0.91 0 Low confidence PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo With other complex events 12 1 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB181 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB181 PBCA 0.97 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48946 ICGC_MB181 female alive C71 22 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 1 178041722 178099829 1 1 14 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 86.22 100 0 0 3 NA Whitelist PBCA-DE 0.62 0.55 NA NA 0.59 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 2 0.07 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 2 13643698 17142903 10 10 14 4 1 3 2 0 0.57 0 19 0 0 19 3 4 21 3 4 86.22 99.89 0 0 8 45 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 20 0.71 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 3 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 9 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 13 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB183 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB183 PBCA 0.91 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48948 ICGC_MB183 male alive C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 10 52684366 53119284 3 3 4 0 2 1 0 0 0.3 0 1 0 0 NA NA NA NA NA NA 7.54 0 99.82 0 2 NA Whitelist PBCA-DE 0.62 0 0 0 0.59 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 6 0.75 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB184 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB184 PBCA 0.98 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48949 ICGC_MB184 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 1 NA NA 0 0 22 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.89 NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 8 127910364 128776351 15 17 22 5 3 3 4 2 0.87 0 16 0 0 16 3 4 16 3 4 4.96 0.21 99.68 3 2 18 Whitelist PBCA-DE 0.99 0 0 0 0.9 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 32 0.73 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB186 X 142188951 142956782 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 4.96 100 0 0 0 1 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB186 PBCA 0.89 1.93 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48951 ICGC_MB186 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 1 9772739 32910678 1 1 5 0 0 1 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 18.15 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.59 NA NA 0.59 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 6 163541338 164176698 1 1 5 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 18.15 0.37 99.48 0 2 3 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 12 NA NA 0 0 5 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 22 NA NA 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB188 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB188 PBCA 0.85 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48952 ICGC_MB188 female C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 9 135540524 135742320 2 2 4 0 1 0 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 7.53 0 99.3 0 2 NA Whitelist PBCA-DE 0.68 0.04 NA 0 0.64 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 4 0.5 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 17 78315289 78347372 1 1 4 0 0 1 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 7.53 99.98 0 0 3 NA Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB189 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB189 PBCA 0.96 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48953 ICGC_MB189 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB19 1 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 3 143501397 144600133 1 1 28 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.17 32.78 64.14 0 2 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 5 87632848 137357445 1 2 28 0 2 0 0 0 0.11 0.26 3 0.05 0 NA NA NA NA NA NA 10.17 0.14 99.72 0 2 3 Whitelist PBCA-DE 0.54 0.5 0.05 0 0.48 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 4 0.07 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 7 99638233 99648923 1 1 28 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 10.17 80.59 19.19 0 3 NA Whitelist PBCA-DE 0.62 0.87 NA NA 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 8 920166 20606971 8 8 28 0 3 4 1 0 0.17 0 1 0.18 0 NA NA NA NA NA NA 10.17 0 99.88 0 2 NA Whitelist PBCA-DE 0.62 0 0.18 0 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 16 0.29 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 9 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 10 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 11 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 12 NA NA 0 0 28 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.34 NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 13 20714879 112206766 2 5 28 0 2 0 2 1 0.26 0 5 0 0 5 3 5 5 3 5 10.17 0.12 99.88 0 2 4 Whitelist PBCA-DE 0.62 0.01 0 0 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 9 0.16 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 16 NA NA 0 0 28 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.76 NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 17 48959012 49106146 1 1 28 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 5 4 4 10.17 100 0 0 4 NA Whitelist PBCA-DE 0.62 0 0 NA 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 2 0.04 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 20 35905314 36086415 1 2 28 0 0 1 0 1 0.39 0 2 0 NA NA NA NA NA NA NA 10.17 0.3 98.73 0 2 3 Whitelist PBCA-DE 0.54 0 0 NA 0.59 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 3 0.05 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB19 X NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB19 PBCA 0.91 2.05 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35554 ICGC_MB19 female alive C71 13 1278 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 42.04 PBCA-DE::ICGC_MB190 1 NA NA 0 0 22 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.89 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 2 NA NA 0 0 22 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA 7 6 7 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 5 NA NA 0 0 22 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.86 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 6 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 7 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 8 117279063 144099108 6 6 22 1 4 1 0 0 0.11 0 16 0 0 16 3 4 17 3 3 77.68 20.68 79.32 0 5 4 Whitelist PBCA-DE 0.54 0 0 0 0.48 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 12 0.27 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 9 16294955 16614281 1 2 22 0 1 0 0 1 0.39 0.21 3 NA NA NA NA NA 5 0 3 77.68 99.87 0 0 3 5 Whitelist PBCA-DE 0.68 0.44 NA NA 0.59 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 3 0.07 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 10 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 13 71324808 73112070 1 2 22 0 2 0 0 0 0.11 0.04 3 NA 0 NA NA NA 4 3 3 77.68 99 1 0 3 2 Whitelist PBCA-DE 0.54 0.13 NA 0 0.48 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 4 0.09 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 16 NA NA 0 0 22 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 17 NA NA 0 0 22 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 7 5 6 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 18 57664618 57807727 1 2 22 1 1 0 0 0 0.57 0.12 1 NA 0 NA NA NA NA NA NA 77.68 95.39 0 0 4 NA Whitelist PBCA-DE 0.68 0.3 NA 0 0.64 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 4 0.09 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 19 35478548 35499703 1 1 22 0 0 1 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 77.68 99.83 0 0 4 NA Whitelist PBCA-DE 0.62 0.61 NA NA 0.59 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 2 0.05 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 20 NA NA 0 0 22 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB190 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB190 PBCA 0.87 3.26 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO48955 ICGC_MB190 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 1 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 2 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 5 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 6 NA NA 0 0 20 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.59 NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 7 38489379 38979657 1 1 20 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 14.2 20.09 79.67 0 2 NA Whitelist PBCA-DE 0.62 0.25 NA NA 0.59 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 8 126099273 129301249 8 8 20 1 4 1 2 0 0.39 0 8 0 0 8 3 5 13 4 6 14.2 30.64 65.74 0 4 3 Whitelist PBCA-DE 0.62 0 0 0 0.59 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 16 0.4 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 12 4378588 4533538 1 1 20 0 1 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 14.2 0 99.92 0 2 NA Whitelist PBCA-DE 0.62 0.83 NA NA 0.59 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 16 NA NA 0 0 20 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.67 NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB198 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB198 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48957 ICGC_MB198 male alive C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 1 11621111 11874687 1 1 10 0 1 0 0 0 0.39 0.04 2 0 NA NA NA NA 4 3 4 11.31 9.25 90.75 0 2 3 Whitelist PBCA-DE 0.62 0.13 0 NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 4 32051625 180802357 1 1 10 0 0 1 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 11.31 21.98 77.82 0 1 2 Whitelist PBCA-DE 0.62 0.74 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 5 87548724 88334898 1 1 10 0 1 0 0 0 0.39 0.48 2 NA NA NA NA NA NA NA NA 11.31 0.43 99.43 0 2 3 Whitelist PBCA-DE 0.62 0.72 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 6 6785841 7068751 1 1 10 0 1 0 0 0 0.39 0.46 2 NA NA NA NA NA NA NA NA 11.31 0.17 99.69 0 2 3 Whitelist PBCA-DE 0.62 0.71 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 8 8189290 12307278 1 1 10 0 0 1 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 11.31 0 99.86 0 2 NA Whitelist PBCA-DE 0.62 0.65 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 11 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 12 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 19 55759593 56290178 1 1 10 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 11.31 0 99.56 0 2 NA Whitelist PBCA-DE 0.62 0.4 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 21 24305055 24354932 1 1 10 0 1 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 11.31 0.1 77 0 2 3 Whitelist PBCA-DE 0.62 0.3 NA NA 0.59 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 2 0.1 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB199 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB199 PBCA 0.96 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48958 ICGC_MB199 male C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB2 1 166906719 167384563 1 1 12 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 22.58 0 100 0 2 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 2 0.08 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 6 127067505 127157066 1 1 12 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 22.58 0 99.83 0 2 NA Whitelist PBCA-DE 0.62 0.76 NA NA 0.59 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 2 0.08 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 19 57700204 59012073 5 5 12 1 0 2 2 0 0.53 0 11 0 0 11 3 3 12 3 5 22.58 1.26 98.37 0 2 9 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 10 0.42 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB2 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB2 PBCA 0.88 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35539 ICGC_MB2 male alive C71 7 3227 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 106.15 PBCA-DE::ICGC_MB205 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 2 161886191 162401348 1 1 12 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 3 15.54 18.25 81.65 0 2 3 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 2 0.08 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 4 NA NA 0 0 12 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 5 13960328 14385134 1 1 12 0 1 0 0 0 0.39 0.54 2 NA NA NA NA NA NA NA NA 15.54 0.23 99.65 0 2 3 Whitelist PBCA-DE 0.62 0.77 NA NA 0.59 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 2 0.08 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 8 83547722 129383569 1 1 12 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 15.54 31.32 68.68 0 2 3 Whitelist PBCA-DE 0.62 0.71 NA NA 0.59 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 2 0.08 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 10 82477075 82682963 4 4 12 0 2 1 1 0 0.57 0 3 0 0 NA NA NA 4 3 3 15.54 13.37 86.45 0 2 3 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 8 0.33 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 12 NA NA 0 0 12 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.28 NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 19 NA NA 0 0 12 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB205 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB205 PBCA 0.92 1.98 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48959 ICGC_MB205 female alive C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB21 1 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 2 15759474 16861648 8 8 11 2 3 1 2 0 0.8 0 8 0 0 8 3 4 9 3 3 2.93 0.45 99.45 0 23 2 Whitelist PBCA-DE 0.87 0 0 0 0.84 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 16 0.73 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 3 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 7 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 10 119297720 130045116 1 1 11 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 2.93 7.93 91.87 0 1 2 Whitelist PBCA-DE 0.62 0.65 NA NA 0.59 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 2 0.09 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 13 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 18 52729985 59892418 1 2 11 1 1 0 0 0 0.57 0.03 3 NA 0 NA NA NA NA NA NA 2.93 7.21 92.75 0 2 7 Whitelist PBCA-DE 0.68 0.12 NA 0 0.64 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 4 0.18 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB21 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB21 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35556 ICGC_MB21 female deceased C71 4 487 487 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 16.02 PBCA-DE::ICGC_MB211 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 9 135468068 135877954 1 1 3 0 1 0 0 0 0.39 0.11 2 NA NA NA NA NA NA NA NA 4.83 0.29 99.04 0 2 3 Whitelist PBCA-DE 0.62 0.29 NA NA 0.59 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 14 NA NA 0 0 3 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 20 NA NA 0 0 3 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB211 X 58361059 64204601 1 1 3 0 1 0 0 0 0.39 0.14 3 NA NA NA NA NA NA NA NA 4.83 95.84 0.78 0 1 2 Whitelist PBCA-DE 0.62 0.34 NA NA 0.59 0 No PBCA-DE ICGC_MB211 PBCA 0.97 1.95 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO48961 ICGC_MB211 female C71 NA NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB224 1 156767997 181497266 1 4 48 0 4 0 0 0 0.01 0.42 7 0 0 7 5 5 8 6 6 18.94 0.1 99.9 0 2 3 Whitelist PBCA-DE 0.21 0.67 0 0 0.16 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 8 0.08 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 2 201801955 201857739 1 1 48 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 18.94 0 99.9 0 2 NA Whitelist PBCA-DE 0.62 0.68 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 3 19945226 19959522 1 1 48 0 1 0 0 0 0.39 0.58 1 0.23 NA NA NA NA 4 4 4 18.94 44.81 55.14 0 2 NA Whitelist PBCA-DE 0.62 0.8 0.24 NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 4 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 5 151777121 151836535 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 18.94 0.11 99.74 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 6 1441844 1458967 1 1 48 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 18.94 0.01 99.84 0 2 3 Whitelist PBCA-DE 0.62 0.62 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 7 141484573 147622203 1 2 48 0 2 0 0 0 0.11 0.33 3 0 0 NA NA NA 7 4 4 18.94 52.68 47.1 0 5 6 Whitelist PBCA-DE 0.54 0.58 0 0 0.48 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 4 0.04 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 8 NA NA 0 0 48 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.76 NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 9 131558294 131718136 1 1 48 0 1 0 0 0 0.39 0.71 2 NA NA NA NA NA 5 3 3 18.94 13.19 86.11 0 3 4 Whitelist PBCA-DE 0.62 0.9 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 10 NA NA 0 0 48 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 12 31796256 32208449 1 1 48 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 18.94 39.02 60.9 0 2 NA Whitelist PBCA-DE 0.62 0.9 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 13 92246673 92277720 1 1 48 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.94 0.03 99.97 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 15 38523441 58980738 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 18.94 75.27 19.95 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 16 58923025 58943025 1 1 48 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 18.94 0.02 99.87 0 2 3 Whitelist PBCA-DE 0.62 0.33 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 17 27090584 78497663 10 11 48 3 3 2 2 1 0.94 0 14 0 0 14 7 14 15 7 7 18.94 49.25 46.3 1 3 2 Whitelist PBCA-DE 0.98 0 0 0 0.96 1 High confidence PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo With other complex events 21 0.22 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 18 4056677 43947901 1 2 48 0 2 0 0 0 0.11 0.37 5 NA 0.04 5 3 5 6 4 4 18.94 75.75 19.61 0 3 2 Whitelist PBCA-DE 0.54 0.62 NA 0.04 0.48 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 4 0.04 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 19 48006125 48024712 1 1 48 0 1 0 0 0 0.39 0.61 1 NA NA NA NA NA NA NA NA 18.94 0 99.56 0 2 NA Whitelist PBCA-DE 0.62 0.83 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 20 54506606 54517635 1 1 48 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.94 0 99.01 0 2 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 21 NA NA 0 0 48 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB224 X 127789276 136375476 1 2 48 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 18.94 99.98 0.02 0 1 2 Whitelist PBCA-DE 0.54 1 NA 0 0.48 1 No PBCA-DE ICGC_MB224 PBCA 0.99 2.04 CNS-Medullo NA 4 0.04 NA 2 PBCA-DE DO48963 ICGC_MB224 male alive C71 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB226 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 10 127758940 128467254 1 1 1 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 25.32 0.52 99.3 0 1 2 Whitelist PBCA-DE 0.62 0.15 NA NA 0.59 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 2 1 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB226 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB226 PBCA 0.95 2.15 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48964 ICGC_MB226 male C71 5 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB227 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 2 NA NA 0 0 4 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 7 NA NA 0 0 4 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.42 NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 19 NA NA 0 0 4 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 22 48862052 49123542 1 1 4 0 1 0 0 0 0.39 0 2 NA 0 NA NA NA NA NA NA 21.74 0.51 99.49 0 2 3 Whitelist PBCA-DE 0.62 0.01 NA 0 0.59 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB227 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB227 PBCA 0.99 2.07 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48965 ICGC_MB227 male alive C71 4 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB228 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 5 121680210 121886581 1 1 5 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 7.59 0.11 99.75 0 2 3 Whitelist PBCA-DE 0.62 0.52 NA NA 0.59 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 14 21603096 21613238 1 1 5 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 7.59 0.17 98.91 0 2 3 Whitelist PBCA-DE 0.62 0 0 NA 0.59 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB228 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB228 PBCA 1 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48966 ICGC_MB228 female C71 8 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB23 1 97637106 98018472 1 1 36 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 16.24 0.15 99.84 0 1 2 Whitelist PBCA-DE 0.62 0.62 NA NA 0.59 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 2 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 3 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 4 NA NA 0 0 36 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.55 NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 5 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 6 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 7 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 8 25032157 37177494 1 3 36 0 0 2 0 1 0.11 0.03 3 0 0 NA NA NA 6 6 6 16.24 19.29 77.29 0 1 2 Whitelist PBCA-DE 0.62 0.12 0 0 0.48 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 5 0.07 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 10 388457 53879148 5 9 36 1 2 1 1 4 0.9 0 11 0 0 11 8 11 12 8 8 16.24 66.92 32.9 0 2 1 Whitelist PBCA-DE 0.97 0 0 0 0.92 1 High confidence PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo Canonical without polyploidization 14 0.19 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 11 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 12 117702577 117737327 1 1 36 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 16.24 95.73 0 0 1 NA Whitelist PBCA-DE 0.62 0.47 NA NA 0.59 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 17 8031528 15108911 4 5 36 1 1 1 1 1 1 0 9 0 0 9 4 9 14 8 14 16.24 63.09 32.48 0 1 2 Whitelist PBCA-DE 0.93 0 0 0 1 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 9 0.12 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 19 NA NA 0 0 36 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.75 NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 21 18595780 34144955 3 3 36 1 0 1 1 0 0.8 0 8 0 0 8 8 8 9 9 9 16.24 20.66 56.69 0 1 2 Whitelist PBCA-DE 0.87 0.01 0 0 0.84 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 6 0.08 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB23 X NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB23 PBCA 0.98 1.88 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35558 ICGC_MB23 female alive C71 10 1218 1218 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 40.07 PBCA-DE::ICGC_MB230 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 9 135489516 135849531 1 1 5 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 0.41 0.25 99.04 0 0 2 Whitelist PBCA-DE 0.62 0.4 NA NA 0.59 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 14 57216236 57245384 1 1 5 0 0 0 1 0 0.39 0.01 2 NA NA NA NA NA 4 0 0 0.41 0.25 98.83 0 4 8 Whitelist PBCA-DE 0.62 0.04 NA NA 0.59 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 15 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 22 NA NA 0 0 5 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.18 NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB230 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB230 PBCA 1 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48967 ICGC_MB230 female C71 4 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 1 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 2 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 3 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 5 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 7 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 8 6664385 143372581 10 10 14 2 1 4 3 0 0.57 0 3 0 0 NA NA NA NA NA NA 10.4 0.42 99.58 0 2 1 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 20 0.71 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 9 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 10 NA NA 0 0 14 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.73 NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 13 25767707 82801385 1 1 14 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 10.4 49.52 50.48 0 1 2 Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 2 0.07 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 15 74678679 74718480 1 1 14 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 10.4 0.04 99.96 0 1 2 Whitelist PBCA-DE 0.62 0.58 NA NA 0.59 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 2 0.07 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 16 NA NA 0 0 14 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.57 NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 19 30833741 30989457 1 1 14 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 10.4 0.26 99.56 0 2 3 Whitelist PBCA-DE 0.62 0.48 NA NA 0.59 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 2 0.07 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB232 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB232 PBCA 0.95 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48968 ICGC_MB232 male C71 3 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB233 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB233 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB233 PBCA 0.99 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48969 ICGC_MB233 female alive C71 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 10 PBCA-DE::ICGC_MB235 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 14 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 20 NA NA 0 0 2 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.15 NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB235 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB235 PBCA 0.99 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48970 ICGC_MB235 female alive C71 2 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 8.03 PBCA-DE::ICGC_MB236 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 2 4483581 31216212 1 2 5 1 1 0 0 0 0.57 0.06 4 NA 0 4 3 4 5 3 3 17.97 4.8 95.1 0 2 1 Whitelist PBCA-DE 0.68 0.19 NA 0 0.64 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 4 0.4 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 6 17146779 23430719 1 1 5 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 17.97 3.67 96.18 0 2 4 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 12 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 16 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 20 NA NA 0 0 5 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.27 NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB236 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB236 PBCA 0.89 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48971 ICGC_MB236 male C71 18 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 1 NA NA 0 0 6 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 6 131527331 133046487 3 3 6 1 0 0 2 0 0.3 0 2 0 0 NA NA NA NA NA NA 20.6 0.84 99.01 0 2 3 Whitelist PBCA-DE 0.62 0 0 0 0.59 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 6 0.5 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB237 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB237 PBCA 0.98 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48972 ICGC_MB237 female C71 11 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB24 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 21 17535118 17764717 1 1 1 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 7.54 0 77.35 0 2 NA Whitelist PBCA-DE 0.62 0.05 NA NA 0.59 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB24 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB24 PBCA 0.94 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35559 ICGC_MB24 male alive C71 7 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB247 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 9 135485039 135872033 2 2 6 0 0 1 1 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 12.58 0 99.84 0 2 NA Whitelist PBCA-DE 0.68 0.08 NA 0 0.64 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 11 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 14 NA NA 0 0 6 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 17 21010194 21316892 2 2 6 0 1 0 1 0 0.57 0 3 0 0 NA NA NA 5 3 3 12.58 0.6 99.39 0 3 4 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB247 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB247 PBCA 0.99 2.12 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48973 ICGC_MB247 female C71 10 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB26 1 53046803 53103898 1 1 6 0 1 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 94.43 100 0 0 4 NA Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 2 0.17 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 5 NA NA 0 0 6 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.57 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 7 NA NA 0 0 6 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.13 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 13 NA NA 0 0 6 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 16 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 19 NA NA 0 0 6 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.29 NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB26 X 55235724 55272805 1 1 6 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 94.43 100 0 0 1 3 Whitelist PBCA-DE 0.62 0.12 NA NA 0.59 0 No PBCA-DE ICGC_MB26 PBCA 0.94 3.7 CNS-Medullo NA 2 0.17 NA 4 PBCA-DE DO35564 ICGC_MB26 male alive C71 8 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB32 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 5 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB32 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB32 PBCA 0.79 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35569 ICGC_MB32 female alive C71 8 2892 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 95.13 PBCA-DE::ICGC_MB34 1 162558385 162728831 1 1 242 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 81.87 100 0 0 3 4 Whitelist PBCA-DE 0.62 0 NA NA 0.59 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 2 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 2 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 3 80545898 151249121 1 16 242 1 2 2 1 10 0.88 0.61 18 0 0 18 11 18 21 11 11 81.87 57 39.92 0 5 6 Whitelist PBCA-DE 0.95 0.83 0 0 0.91 1 Linked to low confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo After polyploidization 22 0.05 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 4 145825625 145999821 1 1 242 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 3 81.87 99.99 0 0 3 4 Whitelist PBCA-DE 0.62 0 NA NA 0.59 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 2 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 5 292496 69696821 46 48 242 14 9 12 11 2 0.77 0 55 0 0 55 7 9 58 7 9 81.87 99.88 0 0 4 5 Whitelist PBCA-DE 0.76 0 0 0 0.84 1 High confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo With other complex events 94 0.19 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 6 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 7 77084803 157150493 2 5 242 2 0 1 1 1 0.57 0.2 11 0 0 11 5 7 12 5 5 81.87 99.69 0.07 0 3 4 Whitelist PBCA-DE 0.93 0.42 0 0 0.64 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 9 0.02 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 8 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 9 17763402 17864364 1 1 242 1 0 0 0 0 0.39 0.07 3 0 NA NA NA NA 6 4 4 81.87 99.3 0 0 4 3 Whitelist PBCA-DE 0.62 0.2 0 NA 0.59 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 2 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 10 74508922 74598411 1 1 242 1 0 0 0 0 0.39 0.44 1 0 NA NA NA NA NA NA NA 81.87 60.39 39.43 0 3 NA Whitelist PBCA-DE 0.62 0.69 0 NA 0.59 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 2 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 11 68340683 68353260 1 1 242 0 0 0 1 0 0.39 0 2 NA NA NA NA NA 4 0 3 81.87 48.97 50.6 0 4 5 Whitelist PBCA-DE 0.62 0.01 NA NA 0.59 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 2 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 12 461707 31932605 30 31 242 7 9 6 8 1 0.88 0 32 0 0 32 5 10 43 9 9 81.87 92.42 7.5 0 4 5 Whitelist PBCA-DE 0.87 0 0 0 0.91 1 Low confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo With other complex events 61 0.13 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 13 94631688 109496433 1 2 242 2 0 0 0 0 0.11 0.02 4 NA 0 4 4 4 6 5 6 81.87 96.85 0.37 0 2 3 Whitelist PBCA-DE 0.54 0.08 NA 0 0.48 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 4 0.01 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 14 29090292 47295794 13 17 242 4 2 3 4 4 0.84 0 35 0 0 35 15 15 51 15 15 81.87 22.31 61.78 0 3 2 Whitelist PBCA-DE 22 0.87 0 0 0 0.88 1 High confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo With other complex events 30 0.06 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 15 38332281 57185178 4 9 242 1 1 1 1 5 1 0.05 4 0 0 4 3 4 6 3 3 81.87 54.7 45.2 0 3 2 Whitelist PBCA-DE 14_22 0.62 0.16 0 0 1 1 Linked to high confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo Canonical without polyploidization 13 0.03 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 16 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 17 27146708 67502119 12 23 242 4 4 3 1 11 0.57 0 20 0 0 20 6 15 24 7 7 81.87 39.51 54.87 0 4 5 Whitelist PBCA-DE 3 0.79 0 0 0 0.64 1 Low confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo With other complex events 35 0.07 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 18 NA NA 0 0 242 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 19 13926040 55341680 1 3 242 1 1 0 1 0 0.8 0.64 12 0 0 12 5 6 14 5 6 81.87 91.92 0 0 4 3 Whitelist PBCA-DE 0.87 0.85 0 0 0.84 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 6 0.01 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 20 6460551 21340626 2 2 242 0 1 0 1 0 0.57 0.19 3 NA 0 NA NA NA 5 4 4 81.87 92.96 0 0 4 3 Whitelist PBCA-DE 0.68 0.41 NA 0 0.64 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 4 0.01 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 21 NA NA 0 0 242 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo NA 0 0 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 22 18004707 43092534 5 10 242 2 2 0 1 5 0.53 0 5 0 0 5 5 5 5 5 5 81.87 98.75 1.25 0 3 2 Whitelist PBCA-DE 14 0.62 0 0 0 0.64 1 Linked to high confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo Canonical without polyploidization 15 0.03 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB34 X 15128807 127701065 17 17 242 3 3 6 5 0 0.66 0 41 0 0 41 7 10 41 7 7 81.87 71.41 24.91 0 2 4 Whitelist PBCA-DE 0.77 0 0 0 0.74 1 High confidence PBCA-DE ICGC_MB34 PBCA 0.97 3.62 CNS-Medullo With other complex events 34 0.07 nonsynonymous_SNV,17_7578235_G_T,CN:2 3 PBCA-DE DO35571 ICGC_MB34 female alive C71 13 1096 1096 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB35 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 5 573801 5359079 1 1 3 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 4.98 0 99.86 0 2 NA Whitelist PBCA-DE 0.62 0.39 NA NA 0.59 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 9 77297821 109717152 1 1 3 1 0 0 0 0 0.39 0.11 2 NA NA NA NA NA 5 3 3 4.98 23.07 76.22 0 1 2 Whitelist PBCA-DE 0.62 0.29 NA NA 0.59 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 10 89463924 89700138 1 1 3 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 4.98 68.62 27.96 0 1 NA Whitelist PBCA-DE 0.62 0.32 NA NA 0.59 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB35 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB35 PBCA 0.94 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35572 ICGC_MB35 female alive C71 4 913 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB36 1 146955459 150020686 1 1 17 0 0 0 1 0 0.39 0.39 3 NA NA NA NA NA 10 10 10 42.26 39.25 60.74 0 3 2 Whitelist PBCA-DE 0.62 0.64 NA NA 0.59 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 2 0.06 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 2 16054209 17087805 2 2 17 0 0 0 2 0 0.11 0 4 0 0 4 3 4 9 3 3 42.26 0.59 99.32 0 2 9 Whitelist PBCA-DE 0.54 0.01 0 0 0.48 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 4 0.12 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 3 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 4 62413720 62534531 1 1 17 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.26 99.73 0.06 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 2 0.06 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 7 33345843 103852809 2 2 17 0 0 1 1 0 0.57 0.23 4 NA 0 4 4 4 5 5 5 42.26 99.77 0 0 3 4 Whitelist PBCA-DE 0.68 0.47 NA 0 0.64 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 4 0.12 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 10 11046757 11159751 2 2 17 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 6 3 3 42.26 8.28 91.54 0 3 4 Whitelist PBCA-DE 0.68 0.01 0 0 0.64 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 4 0.12 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 11 NA NA 0 0 17 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB36 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB36 PBCA 0.99 2.32 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35573 ICGC_MB36 male alive C71 4 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB38 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 10 80979889 124087186 1 1 3 0 0 0 1 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 21.57 2.59 97.23 0 1 2 Whitelist PBCA-DE 0.62 0.32 NA NA 0.59 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 13 47105171 55076018 1 1 3 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 21.57 6.92 93.08 0 1 2 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 17 15306884 52465964 1 1 3 0 0 0 1 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 21.57 81.15 18.85 0 3 4 Whitelist PBCA-DE 0.62 0.23 NA NA 0.59 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB38 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB38 PBCA 0.91 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35575 ICGC_MB38 male alive C71 6 822 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB40 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 5 87581160 88070467 1 1 1 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 10.64 0.27 99.6 0 2 6 Whitelist PBCA-DE 0.62 0.19 NA NA 0.59 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB40 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB40 PBCA 0.24 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35577 ICGC_MB40 male alive C71 3 1005 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 33.06 PBCA-DE::ICGC_MB45 1 NA NA 0 0 3 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.45 NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 10 65104199 65132598 1 1 3 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 91.18 99.82 0 0 4 NA Whitelist PBCA-DE 0.62 0.32 NA NA 0.59 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 2 0.33 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 12 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.33 NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB45 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB45 PBCA 0.96 4.14 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35581 ICGC_MB45 male alive C71 3 974 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 32.04 PBCA-DE::ICGC_MB49 1 NA NA 0 0 5 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.59 NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 12 56301259 56456331 1 1 5 0 1 0 0 0 0.39 0.21 1 NA NA NA NA NA NA NA NA 7.5 0 99.92 0 2 NA Whitelist PBCA-DE 0.62 0.44 NA NA 0.59 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 17 20723598 22177441 2 2 5 1 0 0 1 0 0.57 0 3 0 0 NA NA NA 4 3 4 7.5 98.68 1.31 0 1 2 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 4 0.4 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB49 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB49 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35584 ICGC_MB49 male alive C71 10 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::ICGC_MB5 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 4 85642245 122224068 1 2 5 0 0 1 0 1 0.39 0 2 NA NA NA NA NA NA NA NA 86.15 99.77 0 0 5 6 Whitelist PBCA-DE 0.68 0.02 NA NA 0.59 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 3 0.3 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 7 NA NA 0 0 5 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.1 NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 17 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 19 32617576 32740537 1 1 5 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 86.15 99.83 0 0 4 NA Whitelist PBCA-DE 0.62 0.26 NA NA 0.59 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 2 0.2 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB5 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB5 PBCA 0.94 3.86 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35541 ICGC_MB5 female alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB50 1 NA NA 0 0 60 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 2 121086962 124548216 1 1 60 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 21.21 1.42 98.48 0 2 3 Whitelist PBCA-DE 0.62 0.19 NA NA 0.59 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 2 0.02 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 3 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 4 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 5 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 6 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 7 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 8 126667508 129701837 43 43 60 8 13 11 11 0 0.76 0 36 0 0 36 4 4 37 4 4 21.21 2.07 97.92 3 8 7 Whitelist PBCA-DE 0.86 0 0 0 0.83 0 Low confidence PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo With other complex events 86 0.72 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 9 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 10 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 11 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 12 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 13 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 14 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 15 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 16 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 17 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 19 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 20 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 21 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB50 X NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB50 PBCA 0.95 2.31 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35585 ICGC_MB50 female deceased C71 10 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB51 1 3120194 3351332 1 1 7 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 4 4 20.09 34.06 65.94 0 2 3 Whitelist PBCA-DE 0.62 0.26 NA NA 0.59 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 3 46725412 47212480 1 1 7 1 0 0 0 0 0.39 0.4 2 NA NA NA NA NA NA NA NA 20.09 0.25 99.7 0 1 2 Whitelist PBCA-DE 0.62 0.64 NA NA 0.59 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 4 NA NA 0 0 7 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 5 98879008 99241307 1 1 7 0 1 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 20.09 0 99.86 0 2 NA Whitelist PBCA-DE 0.62 0.62 NA NA 0.59 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 13 42681677 44242103 1 1 7 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 20.09 0 99.88 0 2 NA Whitelist PBCA-DE 0.62 0.45 NA NA 0.59 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 17 13200768 36286487 1 1 7 0 0 0 1 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 20.09 73.57 26.42 0 2 3 Whitelist PBCA-DE 0.62 0.06 NA NA 0.59 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 2 0.14 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB51 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB51 PBCA 0.86 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35586 ICGC_MB51 male alive C71 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB53 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 18 18653536 75574593 3 3 6 2 1 0 0 0 0.3 0 8 0 0 8 3 3 8 3 3 8.26 32.09 67.9 0 2 1 Whitelist PBCA-DE 0.62 0 0 0 0.59 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 6 0.5 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB53 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB53 PBCA 0.49 1.96 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48888 ICGC_MB53 male alive C71 20 1370 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 45.07 PBCA-DE::ICGC_MB56 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 4 170728223 172671738 1 1 4 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 1.92 1.02 98.96 0 1 2 Whitelist PBCA-DE 0.62 0.48 NA NA 0.59 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 10 61478891 118860960 1 1 4 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 1.92 42.34 57.48 0 1 2 Whitelist PBCA-DE 0.62 0.39 NA NA 0.59 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 19 NA NA 0 0 4 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB56 X 93948283 94529916 1 1 4 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 1.92 0.37 99.41 0 1 2 Whitelist PBCA-DE 0.62 0.41 NA NA 0.59 0 No PBCA-DE ICGC_MB56 PBCA 0.86 1.98 CNS-Medullo NA 2 0.25 NA 2 PBCA-DE DO48889 ICGC_MB56 female deceased C71 42 1126 1126 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 37.04 PBCA-DE::ICGC_MB57 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 8 41753574 41957053 2 2 2 0 2 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 0.05 0.26 95.55 0 3 NA Whitelist PBCA-DE 0.54 0.02 NA 0 0.48 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 4 1 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB57 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB57 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48890 ICGC_MB57 female alive C71 23 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB58 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 5 157404078 158444218 1 1 1 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 95.6 99.86 0 0 4 5 Whitelist PBCA-DE 0.62 0.19 NA NA 0.59 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 2 1 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB58 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB58 PBCA 0.91 3.74 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35611 ICGC_MB58 male alive C71 19 1400 1400 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 46.05 PBCA-DE::ICGC_MB59 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 19 44915095 44961855 1 1 1 0 0 0 1 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 0 0 99.83 0 2 NA Whitelist PBCA-DE 0.62 0.08 NA NA 0.59 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB59 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB59 PBCA 0.99 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48891 ICGC_MB59 female alive C71 32 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 14.01 PBCA-DE::ICGC_MB6 1 237837987 239234675 1 2 81 0 0 1 0 1 0.39 0.41 3 0 NA NA NA NA 6 0 3 89.2 100 0 0 15 16 Whitelist PBCA-DE 0.68 0.66 0 NA 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 3 0.02 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 2 15710236 18049954 48 61 81 13 18 7 10 13 0.14 0 58 0 0 58 3 5 59 3 4 89.2 99.9 0 0 63 67 Whitelist PBCA-DE 0.51 0 0 0 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 109 0.67 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 3 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 4 85627976 85642147 1 1 81 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 89.2 99.99 0 0 6 7 Whitelist PBCA-DE 0.62 0.15 NA NA 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 2 0.01 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 5 121652904 121968157 1 1 81 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 89.2 99.86 0 0 4 6 Whitelist PBCA-DE 0.62 0.73 NA NA 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 2 0.01 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 6 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 7 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 8 83933255 84408303 1 1 81 0 1 0 0 0 0.39 0.8 2 NA NA NA NA NA 6 4 4 89.2 93.93 6.07 0 4 5 Whitelist PBCA-DE 0.62 0.95 NA NA 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 2 0.01 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 9 NA NA 0 0 81 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 10 NA NA 0 0 81 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.81 NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 11 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 12 28856336 106002390 1 4 81 0 1 1 0 2 0.57 0.28 3 0 0 NA NA NA 4 0 3 89.2 99.92 0 0 3 4 Whitelist PBCA-DE 0.54 0.52 0 0 0.64 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 6 0.04 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 13 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 14 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 15 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 16 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 17 36459341 36873904 1 16 81 0 1 0 0 15 0.39 0 10 0 0 10 3 4 12 3 4 89.2 73.47 26.53 0 6 10 Whitelist PBCA-DE 0.68 0 0 0 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 17 0.1 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 18 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 19 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 20 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 21 NA NA 0 0 81 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 22 35511780 35609459 1 1 81 0 1 0 0 0 0.39 0.62 2 NA NA NA NA NA NA NA NA 89.2 100 0 0 4 5 Whitelist PBCA-DE 0.62 0.83 NA NA 0.59 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 2 0.01 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB6 X NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB6 PBCA 0.95 4 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35542 ICGC_MB6 female alive C71 14 2374 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 78.09 PBCA-DE::ICGC_MB61 1 153052823 153073789 1 1 2 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 5.06 0.01 99.99 0 1 2 Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 2 0.5 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 2 136522194 138221208 1 1 2 1 0 0 0 0 0.39 0.16 2 NA NA NA NA NA 5 5 5 5.06 0.72 99.18 0 1 2 Whitelist PBCA-DE 0.62 0.37 NA NA 0.59 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 2 0.5 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB61 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB61 PBCA 0.32 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48893 ICGC_MB61 male alive C71 28 365 365 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB63 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.36 NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 15 NA NA 0 0 3 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB63 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB63 PBCA 0.46 2.67 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48894 ICGC_MB63 male alive C71 27 913 913 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 30.03 PBCA-DE::ICGC_MB64 1 105549296 106046050 1 1 19 0 1 0 0 0 0.39 0.18 3 0 0 NA NA NA NA NA NA 13.71 0.2 99.8 0 2 3 Whitelist PBCA-DE 0.62 0.4 0 0 0.59 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 3 76453672 146878549 1 3 19 0 3 0 0 0 0.03 0.14 5 0 0 5 3 5 5 3 3 13.71 0.45 99.41 0 2 3 Whitelist PBCA-DE 0.41 0.34 0 0 0.33 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 6 0.16 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 5 134632667 135020502 1 1 19 0 1 0 0 0 0.39 0.34 1 NA NA NA NA NA 5 5 5 13.71 0.24 99.63 0 2 NA Whitelist PBCA-DE 0.62 0.59 NA NA 0.59 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 8 61215372 61701527 1 1 19 0 1 0 0 0 0.39 0.25 3 NA NA NA NA NA NA NA NA 13.71 0.33 99.55 0 2 3 Whitelist PBCA-DE 0.62 0.49 NA NA 0.59 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 9 20145616 20783377 1 2 19 0 1 1 0 0 0.57 0.17 3 NA 0 NA NA NA NA NA NA 13.71 0.04 99.79 0 2 3 Whitelist PBCA-DE 0.68 0.38 NA 0 0.64 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 4 0.11 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 10 28672288 28841040 1 1 19 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 13.71 0.12 99.69 0 2 3 Whitelist PBCA-DE 0.62 0.81 NA NA 0.59 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 18 48332336 48634843 2 2 19 0 1 1 0 0 0.57 0 5 0 0 5 0 4 6 0 3 13.71 0.39 99.58 0 3 2 Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 4 0.11 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB64 X 84807209 85281474 1 1 19 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.71 100 0 0 1 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB64 PBCA 0.95 2.01 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35612 ICGC_MB64 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 1 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 2 NA NA 0 0 29 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.11 0 NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 3 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 4 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 5 NA NA 0 0 29 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.68 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 6 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 7 10502090 10516570 1 1 29 0 1 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 6.87 0 99.78 0 2 NA Whitelist PBCA-DE 0.62 0.87 NA NA 0.59 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 8 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 10 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 11 NA NA 0 0 29 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.64 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 12 132969179 133165260 1 1 29 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA 4 3 3 6.87 32.42 67.05 0 3 NA Whitelist PBCA-DE 0.62 0.64 NA NA 0.59 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 13 76210652 76240638 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.87 0.03 99.97 0 2 4 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 14 58995974 64549489 1 1 29 1 0 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 6.87 0 99.09 0 2 NA Whitelist PBCA-DE 0.62 0.82 NA NA 0.59 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 16 NA NA 0 0 29 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.4 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 17 64316442 64329737 1 1 29 0 1 0 0 0 0.39 0.55 2 NA NA NA NA NA NA NA NA 6.87 0.02 99.97 0 2 4 Whitelist PBCA-DE 0.62 0.78 NA NA 0.59 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 2 0.03 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 18 NA NA 0 0 29 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.4 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 22 NA NA 0 0 29 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB65 X NA NA 0 0 29 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0 0 NA NA 0 No PBCA-DE ICGC_MB65 PBCA 0.97 1.9 CNS-Medullo NA 0 0 NA 1 PBCA-DE DO35613 ICGC_MB65 male alive C71 18 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB66 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 2 201462661 215443923 1 1 6 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 5.81 5.75 94.14 0 1 2 Whitelist PBCA-DE 0.62 0.66 NA NA 0.59 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 8 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.12 NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 9 79982169 98255570 1 2 6 0 0 1 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 5.81 0 99.3 0 2 NA Whitelist PBCA-DE 0.68 0.01 NA NA 0.59 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 3 0.25 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 10 77441887 90404976 2 2 6 2 0 0 0 0 0.11 0.03 2 NA 0 NA NA NA NA NA NA 5.81 9.56 90.25 0 1 2 Whitelist PBCA-DE 0.54 0.11 NA 0 0.48 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB66 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB66 PBCA 0.94 1.92 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48895 ICGC_MB66 male alive C71 25 1248 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 41.05 PBCA-DE::ICGC_MB67 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 10 NA NA 0 0 2 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 12 131710761 131923584 1 1 2 0 0 0 1 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 4.95 0 99.92 0 2 NA Whitelist PBCA-DE 0.62 0.25 NA NA 0.59 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 2 0.5 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB67 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB67 PBCA 0.99 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48896 ICGC_MB67 male deceased C71 22 1461 1461 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 48.06 PBCA-DE::ICGC_MB69 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 5 NA NA 0 0 6 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.16 NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 8 61528789 61939888 1 1 6 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 4.07 0.28 99.71 0 1 2 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 9 NA NA 0 0 6 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 14 NA NA 0 0 6 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 15 NA NA 0 0 6 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.36 NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 16 63492288 83865499 1 1 6 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 4.07 22.55 77.34 0 1 2 Whitelist PBCA-DE 0.62 0.35 NA NA 0.59 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB69 X 44498135 44878073 1 1 6 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 4.07 0.24 99.54 0 1 2 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB69 PBCA 0.98 2 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48898 ICGC_MB69 female alive C71 29 1157 1157 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 38.06 PBCA-DE::ICGC_MB7 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 8 47226500 100153259 1 1 1 1 0 0 0 0 0.39 0.05 3 NA NA NA NA NA 4 4 4 89.18 96.58 0 0 4 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 2 1 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB7 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB7 PBCA 0.94 3.87 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35543 ICGC_MB7 male alive C71 9 1918 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 63.09 PBCA-DE::ICGC_MB74 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 4 187178766 187196952 2 2 6 0 0 1 1 0 0.57 0.06 1 NA 0 NA NA NA NA NA NA 12.92 0 99.96 0 2 NA Whitelist PBCA-DE 0.68 0.18 NA 0 0.64 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 7 95371745 109218635 1 1 6 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 12.92 8.7 91.27 0 1 2 Whitelist PBCA-DE 0.62 0.53 NA NA 0.59 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 10 32348108 52651413 1 1 6 0 0 1 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 12.92 84.94 14.98 0 1 2 Whitelist PBCA-DE 0.62 0.49 NA NA 0.59 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 16 48835637 66096338 1 1 6 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 12.92 19.1 80.56 0 1 2 Whitelist PBCA-DE 0.62 0.05 NA NA 0.59 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB74 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB74 PBCA 0.96 1.94 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48899 ICGC_MB74 male C71 23 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB75 1 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB75 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB75 PBCA 0.93 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48900 ICGC_MB75 female alive C71 31 956 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 31.45 PBCA-DE::ICGC_MB77 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 5 NA NA 0 0 6 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.57 NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 8 30538634 105429392 3 3 6 0 0 2 1 0 0.3 0 6 0 0 6 6 6 8 8 8 13.63 68.9 27.68 0 1 2 Whitelist PBCA-DE 0.62 0.01 0 0 0.59 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 6 0.5 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 11 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB77 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB77 PBCA 0.37 1.96 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO48902 ICGC_MB77 female alive C71 29 734 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.14 PBCA-DE::ICGC_MB78 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 17 NA NA 0 0 3 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 20 NA NA 0 0 3 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB78 X 66818559 66830434 1 1 3 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 9.42 100 0 0 1 NA Whitelist PBCA-DE 0.62 0.34 NA NA 0.59 0 No PBCA-DE ICGC_MB78 PBCA 0.94 1.93 CNS-Medullo NA 2 0.33 NA 2 PBCA-DE DO48904 ICGC_MB78 male deceased C71 38 1096 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 36.05 PBCA-DE::ICGC_MB79 1 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 5 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB79 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB79 PBCA 1 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48905 ICGC_MB79 male alive C71 32 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB8 1 104838515 104851915 1 1 6 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 12.19 0.01 99.99 0 1 2 Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 5 121699955 121920218 2 2 6 0 0 1 1 0 0.57 0 4 0 0 4 4 4 5 5 5 12.19 0.06 99.8 0 2 3 Whitelist PBCA-DE 0.68 0.02 0 0 0.64 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 4 0.33 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 8 61405129 61783523 1 1 6 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 12.19 99.63 0.26 0 1 2 Whitelist PBCA-DE 0.62 0.51 NA NA 0.59 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 15 64133832 64405339 1 1 6 0 1 0 0 0 0.39 0.16 2 NA NA NA NA NA NA NA NA 12.19 0.26 99.61 0 2 3 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB8 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB8 PBCA 0.98 1.91 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35544 ICGC_MB8 female alive C71 11 1887 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 62.07 PBCA-DE::ICGC_MB81 1 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 2 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 3 83993082 118079412 74 74 91 20 21 20 13 0 0.53 0 48 0 0 48 10 21 52 10 10 2.32 14.99 81.83 1 5 6 Whitelist PBCA-DE 0.68 0 0 0 0.64 1 High confidence PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo With other complex events 148 0.81 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 4 NA NA 0 0 91 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 5 NA NA 0 0 91 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 6 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 7 NA NA 0 0 91 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 8 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 9 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 10 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 11 86457769 95813632 3 3 91 1 0 1 1 0 0.8 0.62 1 0 0 NA NA NA NA NA NA 2.32 0 99.57 0 2 NA Whitelist PBCA-DE 0.87 0.83 0 0 0.84 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 6 0.03 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 12 51418504 53978530 1 1 91 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 2.32 1.91 98.01 0 1 2 Whitelist PBCA-DE 0.62 0.33 NA NA 0.59 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 2 0.01 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 13 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 14 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 15 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 16 NA NA 0 0 91 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.91 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 17 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 18 NA NA 0 0 91 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.91 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 19 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 20 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 21 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 22 NA NA 0 0 91 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB81 X NA NA 0 0 91 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 1 No PBCA-DE ICGC_MB81 PBCA 0.97 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO48906 ICGC_MB81 female C71 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 1 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 2 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 3 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 4 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 5 157571216 158681176 1 3 58 0 3 0 0 0 0.03 1 5 0 0 5 0 3 7 0 3 96.18 99.87 0 0 9 5 Whitelist PBCA-DE 0.41 1 0 0 0.33 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 6 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 7 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 8 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 9 20141118 20915870 2 2 58 0 2 0 0 0 0.11 0.5 2 0 0 NA NA NA 4 0 0 96.18 99.83 0 0 8 9 Whitelist PBCA-DE 0.54 0.74 0 0 0.48 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 10 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 11 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 12 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 13 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 14 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 15 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 16 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 17 58152635 58903220 2 2 58 0 2 0 0 0 0.11 0.67 1 NA 0 NA NA NA NA NA NA 96.18 99.98 0 0 7 NA Whitelist PBCA-DE 0.54 0.87 NA 0 0.48 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 18 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 19 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 20 305936 62568476 47 47 58 11 12 13 11 0 0.97 0 23 0 0 23 23 23 23 23 23 96.18 99.25 0 0 4 3 Whitelist PBCA-DE 0.99 0 0 0 0.98 1 High confidence PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo After polyploidization 94 0.81 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 21 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 22 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB83 X NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB83 PBCA 0.8 4.45 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35616 ICGC_MB83 female alive C71 14 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 2 73117124 131506144 4 4 22 1 1 1 1 0 1 0.01 7 0 0 7 5 7 9 5 8 66.48 44.18 55.73 0 2 4 Whitelist PBCA-DE 1 0.04 0 0 1 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 8 0.18 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 3 9008605 9093267 1 1 22 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 66.48 99.95 0 0 3 4 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 2 0.05 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 4 70719734 104205379 1 2 22 1 1 0 0 0 0.57 0.18 3 NA 0 NA NA NA 4 3 3 66.48 99.97 0.01 0 3 2 Whitelist PBCA-DE 0.68 0.4 NA 0 0.64 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 4 0.09 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 5 NA NA 0 0 22 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.36 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 6 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 7 NA NA 0 0 22 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.58 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 8 146279802 146292524 1 1 22 0 1 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 66.48 29.34 67.09 0 2 NA Whitelist PBCA-DE 0.62 0.56 NA NA 0.59 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 2 0.05 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 9 NA NA 0 0 22 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.81 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 11 65320950 65332818 1 1 22 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 66.48 0 99.57 0 2 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 2 0.05 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 12 60108234 60177216 1 1 22 0 1 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 66.48 99.92 0 0 3 NA Whitelist PBCA-DE 0.62 0.23 NA NA 0.59 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 2 0.05 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 13 NA NA 0 0 22 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 14 NA NA 0 0 22 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 17 NA NA 0 0 22 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.7 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 18 25115564 25276579 1 1 22 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 66.48 99.96 0 0 4 5 Whitelist PBCA-DE 0.62 0.69 NA NA 0.59 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 2 0.05 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 19 NA NA 0 0 22 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB84 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB84 PBCA 0.79 2.93 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35617 ICGC_MB84 male alive C71 12 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::ICGC_MB85 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 3 39336090 75134038 1 2 4 0 0 1 1 0 0.57 0 3 0 0 NA NA NA NA NA NA 12.68 17.98 81.97 0 2 1 Whitelist PBCA-DE 0.68 0.01 0 0 0.64 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 4 0.5 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 7 NA NA 0 0 4 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.42 NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB85 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB85 PBCA 0.92 1.97 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35618 ICGC_MB85 female alive C71 5 3470 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 114.14 PBCA-DE::ICGC_MB86 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 4 91206654 93090440 1 1 1 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 23.3 0 99.75 0 2 NA Whitelist PBCA-DE 0.62 0.2 NA NA 0.59 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB86 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB86 PBCA 0.91 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35619 ICGC_MB86 male alive C71 4 2222 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 73.09 PBCA-DE::ICGC_MB88 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 2 16737955 53658303 1 1 1 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 4.95 0 99.9 0 2 NA Whitelist PBCA-DE 0.62 0.24 NA NA 0.59 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 2 1 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB88 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB88 PBCA 0.92 1.93 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35620 ICGC_MB88 male alive C71 2 822 822 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 27.04 PBCA-DE::ICGC_MB89 1 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 3 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 5 115701524 116137235 1 1 20 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.08 0.24 99.62 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 7 32148714 32316844 1 1 20 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 18.08 0.11 99.67 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 2 0.05 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 8 83621142 84686826 8 8 20 2 2 1 3 0 0.8 0 13 0 0 13 0 4 31 5 5 18.08 9.19 90.8 0 4 20 Whitelist PBCA-DE 0.87 0 0 0 0.84 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 16 0.4 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 10 NA NA 0 0 20 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.82 NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 13 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 21 17498535 18619667 1 2 20 0 2 0 0 0 0.11 0.02 3 NA 0 NA NA NA NA NA NA 18.08 0.78 76.57 0 2 3 Whitelist PBCA-DE 0.54 0.1 NA 0 0.48 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 4 0.1 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB89 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB89 PBCA 0.98 2.04 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35621 ICGC_MB89 female deceased C71 4 183 183 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 6.02 PBCA-DE::ICGC_MB9 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 9 135469284 135879942 3 3 4 0 1 1 1 0 0.8 0 4 0 0 4 4 4 5 5 5 77.31 99.3 0 0 3 4 Whitelist PBCA-DE 0.87 0 0 0 0.84 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 6 0.75 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB9 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB9 PBCA 0.35 4.14 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35545 ICGC_MB9 male alive C71 6 2283 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 75.1 PBCA-DE::ICGC_MB90 1 15782208 15801594 1 1 3 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 53.25 100 0 0 3 NA Whitelist PBCA-DE 0.62 0.45 NA NA 0.59 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 2 0.33 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 7 29748291 29953869 1 1 3 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 53.25 99.64 0.13 0 2 3 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 2 0.33 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 9 NA NA 0 0 3 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.29 NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB90 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB90 PBCA 0.99 2.45 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35622 ICGC_MB90 male alive C71 2 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 22.04 PBCA-DE::ICGC_MB91 1 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 2 NA NA 0 0 34 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 3 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 4 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 5 121649390 121859644 1 1 34 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 12.79 0.12 99.77 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 7 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 8 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 9 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 10 89511733 89634943 1 1 34 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 3 3 12.79 42.33 57.5 0 0 1 Whitelist PBCA-DE 0.62 0.87 NA NA 0.59 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 12 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 14 NA NA 0 0 34 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 17 19371748 79563637 27 27 34 7 7 6 7 0 0.99 0 15 0 0 15 6 10 16 6 6 12.79 76.5 23.5 0 4 3 Whitelist PBCA-DE 1 0 0 0 1 0 Low confidence PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo With other complex events 54 0.79 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 20 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 21 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB91 X NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB91 PBCA 0.86 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35623 ICGC_MB91 male alive C71 15 791 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 26.02 PBCA-DE::ICGC_MB94 1 NA NA 0 0 30 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 2 16117067 16226393 2 2 30 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 8 3 5 87.28 97.3 0 0 5 16 Whitelist PBCA-DE 0.68 0.27 0 0 0.64 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 4 0.07 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 3 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 4 166644535 166924531 1 1 30 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 87.28 99.78 0 0 5 6 Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 2 0.03 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 6 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 7 24963478 116215875 1 2 30 0 1 0 1 0 0.57 0.68 5 NA 0 5 4 5 7 5 7 87.28 99.78 0 0 7 8 Whitelist PBCA-DE 0.68 0.88 NA 0 0.64 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 4 0.07 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 8 34863967 130007928 1 4 30 2 0 0 1 1 0.3 0.02 9 0 0 9 4 4 13 4 5 87.28 96.47 0 0 6 5 Whitelist PBCA-DE 0.62 0.07 0 0 0.59 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 7 0.12 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 9 10546847 12371899 1 1 30 0 1 0 0 0 0.39 0.33 2 NA NA NA NA NA 6 6 6 87.28 99.33 0 1 3 4 Whitelist PBCA-DE 0.62 0.58 NA NA 0.59 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 2 0.03 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 10 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 11 48247600 48311018 1 1 30 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 87.28 63.85 35.72 0 4 NA Whitelist PBCA-DE 0.62 1 NA NA 0.59 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 2 0.03 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 12 12616089 127105460 13 13 30 4 5 2 2 0 0.56 0 26 0 0 26 9 21 26 9 21 87.28 99.92 0 0 5 9 Whitelist PBCA-DE 0.68 0 0 0 0.64 1 High confidence PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo With other complex events 26 0.43 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 20 NA NA 0 0 30 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.72 NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB94 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 1 No PBCA-DE ICGC_MB94 PBCA 0.95 3.96 CNS-Medullo NA 0 0 NA 5 PBCA-DE DO35625 ICGC_MB94 female deceased C71 15 548 548 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.03 PBCA-DE::ICGC_MB96 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 3 NA NA 0 0 5 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.55 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 5 45783376 45819523 1 1 5 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 14.88 0 99.85 0 2 NA Whitelist PBCA-DE 0.62 0.52 NA NA 0.59 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 7 NA NA 0 0 5 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.48 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 10 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 13 NA NA 0 0 5 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 15 61686774 75488280 1 1 5 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 14.88 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.32 NA NA 0.59 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 16 NA NA 0 0 5 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB96 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB96 PBCA 0.99 1.95 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35627 ICGC_MB96 male alive C71 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 24.05 PBCA-DE::ICGC_MB98 1 193332247 193899720 1 1 3 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 60.62 100 0 0 3 4 Whitelist PBCA-DE 0.62 0.45 NA NA 0.59 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 2 0.33 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 6 NA NA 0 0 3 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.38 NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 7 9044596 52705489 1 1 3 1 0 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 60.62 99.77 0 0 3 4 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 2 0.33 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 13 NA NA 0 0 3 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.27 NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_MB98 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_MB98 PBCA 0.96 2.56 CNS-Medullo NA 0 0 NA 3 PBCA-DE DO35628 ICGC_MB98 male alive C71 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 12.01 PBCA-DE::ICGC_PA10 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 7 138550359 140493541 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 3 0.06 1.27 98.5 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA10 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA10 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35880 ICGC_PA10 female alive C71.6 3 426 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA100 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 7 138546588 140490311 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA100 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA100 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36051 ICGC_PA100 female alive C71.6 1 335 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 11.02 PBCA-DE::ICGC_PA102 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 7 140489653 143056463 1 1 1 0 0 0 1 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.06 1.61 98.16 0 1 2 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA102 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA102 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36054 ICGC_PA102 male alive C71.6 15 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA103 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 7 138538558 140489004 1 1 1 0 0 1 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.17 1.23 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA103 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA103 PBCA 0.42 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36057 ICGC_PA103 male alive C71.5 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 7 138554622 140565254 1 2 2 1 1 0 0 0 0.57 0 2 NA 0 NA NA NA NA NA NA 0.07 1.22 98.56 0 2 3 Whitelist PBCA-DE 0.68 0.02 NA 0 0.64 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 4 1 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA107 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA107 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36062 ICGC_PA107 female alive C71.5 4 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA108 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 7 138544903 140488744 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA108 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA108 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36065 ICGC_PA108 female alive C71.7 5 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA109 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 7 138545770 140487942 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA109 X NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.26 NA NA NA 0 No PBCA-DE ICGC_PA109 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36068 ICGC_PA109 female alive C71.6 5 274 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 9.01 PBCA-DE::ICGC_PA11 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 7 138542535 140491864 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 4.35 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 21 46011026 46058073 1 1 2 0 0 0 1 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 4.35 0 70.29 0 2 NA Whitelist PBCA-DE 0.62 0.09 NA NA 0.59 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA11 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA11 PBCA 0.64 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35883 ICGC_PA11 female alive C71.6 11 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA110 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 7 138542775 140489720 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA110 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA110 PBCA 0.52 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36071 ICGC_PA110 male alive C71.6 12 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA112 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 5 179005382 179418178 1 2 2 0 0 1 0 1 0.39 0 2 NA NA NA NA NA NA NA NA 4.98 0.23 99.66 0 1 2 Whitelist PBCA-DE 0.68 0.02 NA NA 0.59 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 3 0.75 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 7 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.27 NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA112 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA112 PBCA 0.43 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36074 ICGC_PA112 male alive C71.3 14 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA116 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 6 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.3 NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 7 138544574 140482556 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 15.43 1.22 98.71 0 2 3 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 9 NA NA 0 0 2 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA116 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA116 PBCA 0.31 2.26 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36077 ICGC_PA116 female alive C71.6 50 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA117 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 9 NA NA 0 0 2 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.22 NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 15 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA117 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA117 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36080 ICGC_PA117 female alive C71.7 40 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA12 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 6 29798597 29977439 1 1 4 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 27.69 99.85 0 0 3 NA Whitelist PBCA-DE 0.62 0.45 NA NA 0.59 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 2 0.25 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 7 138527011 140484397 1 1 4 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 27.69 99.77 0 0 3 5 Whitelist PBCA-DE 0.62 0.42 NA NA 0.59 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 2 0.25 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 13 NA NA 0 0 4 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 20 23686633 23749216 1 1 4 1 0 0 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 27.69 0 99.03 0 2 NA Whitelist PBCA-DE 0.62 0.24 NA NA 0.59 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 2 0.25 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA12 X NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_PA12 PBCA 0.32 2.29 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35886 ICGC_PA12 female alive C71.7 14 761 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 25.03 PBCA-DE::ICGC_PA126 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 7 138537261 140489050 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 0.1 1.23 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 14 106855756 106936849 1 1 2 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 0.1 1.25 95.57 0 2 NA Whitelist PBCA-DE 0.62 0.19 NA NA 0.59 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA126 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA126 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36083 ICGC_PA126 female alive C71.7 no treatment 9 1400 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 46.05 PBCA-DE::ICGC_PA129 1 NA NA 0 0 6 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 3 NA NA 0 0 6 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 6 NA NA 0 0 6 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.56 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 7 138545400 140481699 1 1 6 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 30.17 99.77 0 0 3 4 Whitelist PBCA-DE 0.62 0 NA NA 0.59 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 2 0.17 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 11 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 17 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA129 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA129 PBCA 0.7 2.19 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36087 ICGC_PA129 male alive C71.6 no treatment 25 5510 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 181.25 PBCA-DE::ICGC_PA131 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 7 138539930 140490785 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 3 53.51 97.32 0 0 3 5 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 2 1 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA131 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA131 PBCA 0.37 2.62 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36091 ICGC_PA131 female alive C71.6 no treatment 20 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA134 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 9 92325333 137979386 4 4 7 0 1 2 1 0 0.57 0 1 0 0 NA NA NA 4 3 3 4.95 0.1 97.39 0 2 NA Whitelist PBCA-DE 0.68 0 0 0 0.64 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 8 0.57 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA134 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA134 PBCA 0.99 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36095 ICGC_PA134 male alive C71.7 7 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA135 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 7 138538979 140488098 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.11 1.22 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA135 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA135 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36099 ICGC_PA135 male alive C71.6 3 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA136 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 7 138545177 140488424 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 19 53941453 53978870 1 1 2 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 0.06 0 99.83 0 2 NA Whitelist PBCA-DE 0.62 0.14 NA NA 0.59 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA136 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA136 PBCA 0.57 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36103 ICGC_PA136 female alive C71.6 14 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 7 138540382 140492243 1 1 3 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 0.06 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 19 53788646 53801920 1 1 3 0 0 1 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 0.06 0 99.83 0 2 NA Whitelist PBCA-DE 0.62 0.18 NA NA 0.59 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 21 15250821 15270430 1 1 3 0 1 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 0.06 0 77.5 0 2 NA Whitelist PBCA-DE 0.62 0.13 NA NA 0.59 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA138 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA138 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36107 ICGC_PA138 female alive C71.6 11 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA14 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 7 138550986 140492715 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA14 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA14 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35889 ICGC_PA14 female alive C71.5 5 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA140 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 3 NA NA 0 0 2 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.33 NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 7 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.02 NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA140 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA140 PBCA 0.56 2.58 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO36111 ICGC_PA140 female alive C71.5 10 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 1 11717516 11885081 1 4 4 2 0 0 0 2 0.11 0 2 0 0 NA NA NA NA NA NA 0.02 0.04 99.96 0 1 2 Whitelist PBCA-DE 0.68 0 0 0 0.48 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 6 0.75 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 7 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.07 NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA144 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA144 PBCA 0.62 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36123 ICGC_PA144 female alive C71.0 2 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 7 138537323 140491584 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.07 1.23 98.57 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA145 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA145 PBCA 0.58 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36127 ICGC_PA145 female alive C71.6 7 122 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 4.01 PBCA-DE::ICGC_PA147 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 7 138545823 140492592 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA147 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA147 PBCA 0.68 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36131 ICGC_PA147 male alive C71.6 12 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 7 138541805 140487675 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 5 5 5.01 1.29 98.48 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA148 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA148 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36135 ICGC_PA148 male alive C71.5 1 152 152 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 7 138543923 140493988 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.23 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA150 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA150 PBCA 0.57 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36139 ICGC_PA150 male alive C71.6 2 152 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 5 PBCA-DE::ICGC_PA158 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA158 X NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.16 NA NA NA 0 No PBCA-DE ICGC_PA158 PBCA 0.72 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36147 ICGC_PA158 female alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 6 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 9 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.04 NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 22 38365609 46587217 1 2 4 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 5.22 9.75 90.25 0 1 2 Whitelist PBCA-DE 0.54 0.01 NA 0 0.48 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 4 0.5 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA159 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA159 PBCA 0.81 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36151 ICGC_PA159 male alive C71.0 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 7 138541988 140489206 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.02 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA161 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA161 PBCA 0.65 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36155 ICGC_PA161 male alive C71.6 1 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 2 177087404 177175013 1 1 2 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 5.01 0 99.91 0 2 NA Whitelist PBCA-DE 0.62 0.37 NA NA 0.59 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 6 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.3 NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA162 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA162 PBCA 0.34 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36159 ICGC_PA162 male alive C71.6 7 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 1 NA NA 0 0 1 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.23 NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 19 NA NA 0 0 1 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA163 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA163 PBCA 0.64 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36163 ICGC_PA163 female alive C71.7 29 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 7 138539032 140491304 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 16.26 1.23 98.52 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA165 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA165 PBCA 0.75 2.05 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36167 ICGC_PA165 male alive C71.7 5 91 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 2.99 PBCA-DE::ICGC_PA166 1 NA NA 0 0 48 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.4 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 2 NA NA 0 0 48 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.4 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 3 NA NA 0 0 48 0 0 0 0 0 NA 0.39 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 4 NA NA 0 0 48 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.14 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 5 NA NA 0 0 48 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.93 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 6 NA NA 0 0 48 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.62 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 7 NA NA 0 0 48 0 0 0 0 0 NA 0.18 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.4 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 8 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 9 NA NA 0 0 48 0 0 0 0 0 NA 0.44 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 0.01 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 10 NA NA 0 0 48 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 11 NA NA 0 0 48 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.53 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 12 NA NA 0 0 48 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.21 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 13 NA NA 0 0 48 0 0 0 0 0 NA 0.23 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.46 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 14 NA NA 0 0 48 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.2 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 15 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 17 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 18 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 19 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA166 X NA NA 0 0 48 0 0 0 0 0 NA 0.73 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.91 0 NA NA 0 No PBCA-DE ICGC_PA166 PBCA 0.71 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36171 ICGC_PA166 female alive C71.0 combined chemo+radiation therapy unknown 8 944 944 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 31.05 PBCA-DE::ICGC_PA17 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 7 138541227 140487719 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA17 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA17 PBCA 0.61 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35892 ICGC_PA17 male alive C71.7 radiation therapy unknown 4 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 7 138548901 140491224 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.07 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA21 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA21 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35898 ICGC_PA21 female alive C71.0 radiation therapy unknown 15 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA22 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 7 138547176 140483942 1 1 2 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 35.23 1.22 98.53 0 3 NA Whitelist PBCA-DE 0.62 0.02 NA NA 0.59 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA22 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA22 PBCA 0.62 2.29 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35901 ICGC_PA22 male alive C71.6 4 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA24 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 7 138541121 140490163 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.02 1.22 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA24 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA24 PBCA 0.7 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35904 ICGC_PA24 male alive C71.0 2 639 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 21.02 PBCA-DE::ICGC_PA25 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 7 138543362 140493805 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA25 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA25 PBCA 0.55 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35907 ICGC_PA25 male alive C71.7 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA29 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 7 138539890 140493448 1 1 2 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 5.02 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.02 NA NA 0.59 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA29 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA29 PBCA 0.49 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35916 ICGC_PA29 male alive C71.0 chemotherapy unknown 12 6788 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 223.29 PBCA-DE::ICGC_PA30 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 7 79768433 140484427 2 2 2 0 0 1 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 9.21 97.45 0 0 5 NA Whitelist PBCA-DE 0.68 0.02 NA 0 0.64 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 4 1 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA30 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA30 PBCA 0.37 2.2 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35919 ICGC_PA30 female alive C71.6 no treatment 14 6301 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 207.27 PBCA-DE::ICGC_PA33 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 7 138537139 140490321 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 5.03 1.23 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 14 NA NA 0 0 2 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA33 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA33 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35922 ICGC_PA33 male alive C71.6 no treatment 4 5357 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 176.22 PBCA-DE::ICGC_PA34 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.42 NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 4 NA NA 0 0 3 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.41 NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 7 138539416 140491364 1 1 3 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 5.11 1.23 98.55 0 2 5 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA34 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA34 PBCA 0.3 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35925 ICGC_PA34 male alive C71.5 no treatment 2 5327 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 175.23 PBCA-DE::ICGC_PA36 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 7 138540916 140492000 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.82 1.23 98.52 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA36 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA36 PBCA 0.77 2.06 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35928 ICGC_PA36 female alive C71.6 no treatment 11 5571 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 183.26 PBCA-DE::ICGC_PA37 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 3 185628840 185709326 1 1 3 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 5.01 0 99.95 0 2 NA Whitelist PBCA-DE 0.62 0.42 NA NA 0.59 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 7 138543040 140491683 1 1 3 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.36 NA NA 0.59 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA37 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA37 PBCA 0.47 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35931 ICGC_PA37 male alive C71.6 no treatment 9 4810 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 158.22 PBCA-DE::ICGC_PA39 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 7 138542583 140492901 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.23 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA39 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA39 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35934 ICGC_PA39 female alive C71.6 no treatment 9 7732 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 254.34 PBCA-DE::ICGC_PA4 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 7 138541734 140494151 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 5.01 1.23 98.55 0 2 5 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA4 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA4 PBCA 0.23 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35869 ICGC_PA4 male alive C71.0 1 670 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA42 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 3 NA NA 0 0 2 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.33 NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 19 53335783 53374273 1 1 2 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 4.98 0 99.82 0 2 NA Whitelist PBCA-DE 0.62 0.14 NA NA 0.59 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA42 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA42 PBCA 0.37 1.94 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35940 ICGC_PA42 male alive C71.6 3 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 7 138546185 140492816 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.71 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA43 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA43 PBCA 0.66 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35943 ICGC_PA43 female alive C71.7 radiation therapy unknown 6 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA46 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 7 138542839 140489955 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA46 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA46 PBCA 0.66 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35946 ICGC_PA46 male alive C71.0 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA48 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 7 138551634 140492331 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.07 1.22 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA48 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA48 PBCA 0.8 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35949 ICGC_PA48 female alive C71.5 3 609 609 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA50 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 6 32514785 32541156 1 1 3 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 5.01 0 99.85 0 2 NA Whitelist PBCA-DE 0.62 0.38 NA NA 0.59 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 7 138541846 140489613 1 1 3 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.04 NA NA 0.59 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA50 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA50 PBCA 0.79 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35952 ICGC_PA50 male alive C71.7 radiation therapy unknown 6 670 670 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 22.04 PBCA-DE::ICGC_PA53 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 7 138537973 140481983 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.02 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA53 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA53 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35955 ICGC_PA53 male alive C71.6 10 457 457 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 15.03 PBCA-DE::ICGC_PA55 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 7 138541755 140489360 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA55 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA55 PBCA 0.68 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35959 ICGC_PA55 female alive C71.6 radiation therapy unknown 5 731 731 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA56 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 7 138537592 140493339 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.02 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA56 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA56 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35961 ICGC_PA56 male alive C71.6 9 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 7 140156585 140481765 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 30.52 99.74 0 0 3 5 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 2 1 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA58 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA58 PBCA 0.34 2.19 CNS-PiloAstro NA 0 0 NA 3 PBCA-DE DO35964 ICGC_PA58 male alive C71.7 13 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA59 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 7 138547563 140488511 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA59 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA59 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35967 ICGC_PA59 female alive C71.6 radiation therapy unknown 5 731 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 24.05 PBCA-DE::ICGC_PA64 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 7 138543665 140492247 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA64 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA64 PBCA 0.58 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35976 ICGC_PA64 male alive C71.7 4 609 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 20.03 PBCA-DE::ICGC_PA69 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 17 29293941 29637646 1 1 1 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 0 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.1 NA NA 0.59 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA69 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA69 PBCA 0.73 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35982 ICGC_PA69 female alive C71.0 6 517 517 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 17.01 PBCA-DE::ICGC_PA70 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 7 138538503 140493484 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA70 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA70 PBCA 0.73 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35985 ICGC_PA70 male alive C71.6 6 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA73 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 7 138539371 140488140 1 1 2 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 26.83 1.22 98.55 0 2 4 Whitelist PBCA-DE 0.62 0.27 NA NA 0.59 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA73 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA73 PBCA 0.45 2.15 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35991 ICGC_PA73 male alive C71.6 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA79 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 7 138540429 140481620 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.01 1.22 98.56 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA79 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA79 PBCA 0.76 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35997 ICGC_PA79 male alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA8 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 7 138552685 140483376 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 5 0.08 1.52 98.25 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA8 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA8 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35874 ICGC_PA8 female alive C71.6 7 548 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 18.03 PBCA-DE::ICGC_PA82 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 6 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.02 NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 9 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA82 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA82 PBCA 0.4 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36003 ICGC_PA82 male alive C71.5 12 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA83 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 7 138538945 140493719 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.07 1.23 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA83 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA83 PBCA 0.79 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36006 ICGC_PA83 female alive C71.7 8 365 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 12.01 PBCA-DE::ICGC_PA84 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 9 21184971 21204584 1 1 1 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 5.05 0 99.32 0 2 NA Whitelist PBCA-DE 0.62 0.14 NA NA 0.59 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA84 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA84 PBCA 0.76 1.95 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36009 ICGC_PA84 male alive C71.5 radiation therapy unknown 9 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA85 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 7 138546214 140488592 1 1 2 0 0 1 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 0.09 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.02 NA NA 0.59 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA85 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA85 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36012 ICGC_PA85 female alive C71.6 4 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA86 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 7 138547351 140491433 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.02 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA86 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA86 PBCA 0.75 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36015 ICGC_PA86 male alive C71.6 11 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA87 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 7 138543207 140492009 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.53 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA87 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA87 PBCA 0.65 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36018 ICGC_PA87 female alive C71.6 4 304 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 10 PBCA-DE::ICGC_PA88 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.39 NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 7 138551814 140488373 1 1 3 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.54 0 2 3 Whitelist PBCA-DE 0.62 0.04 NA NA 0.59 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 2 0.33 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 11 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.33 NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA88 X NA NA 0 0 3 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.34 NA NA NA 0 No PBCA-DE ICGC_PA88 PBCA 0.67 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36021 ICGC_PA88 female alive C71.6 6 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA89 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA89 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA89 PBCA 0.6 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36024 ICGC_PA89 male alive C71.7 8 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA9 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 7 138546748 140494123 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA9 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA9 PBCA 0.74 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO35877 ICGC_PA9 female alive C71.7 15 700 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 23.03 PBCA-DE::ICGC_PA91 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 7 138544268 140493473 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA91 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA91 PBCA 0.75 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36027 ICGC_PA91 female alive C71.7 3 183 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 6.02 PBCA-DE::ICGC_PA93 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 7 138545930 140488754 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.12 1.22 98.54 0 2 4 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA93 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA93 PBCA 0.63 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36033 ICGC_PA93 female alive C71.6 21 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA94 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 7 138546698 140488645 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 0.06 1.22 98.55 0 2 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA94 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA94 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36036 ICGC_PA94 female alive C71.6 4 426 426 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 14.01 PBCA-DE::ICGC_PA95 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 7 138523600 140489249 1 1 2 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 0.06 1.24 98.74 0 2 3 Whitelist PBCA-DE 0.62 0.02 NA NA 0.59 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 2 0.5 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA95 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA95 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36039 ICGC_PA95 female alive C71.6 7 244 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 8.03 PBCA-DE::ICGC_PA96 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 5 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.19 NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 7 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA96 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA96 PBCA 0.69 2 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36042 ICGC_PA96 female alive C71.7 15 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 7 138541855 140491715 1 1 1 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 5.12 1.23 98.54 0 2 5 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 2 1 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::ICGC_PA99 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE ICGC_PA99 PBCA 0.31 1.93 CNS-PiloAstro NA 0 0 NA 2 PBCA-DE DO36048 ICGC_PA99 male alive C71.6 9 213 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-PiloAstro PBCA DE 1 7.01 PBCA-DE::MBRep_T27 1 61080984 61126160 1 1 62 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA 6 3 3 77.57 100 0 0 1 3 Whitelist PBCA-DE 0.62 0.73 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 2 4612230 4638144 1 1 62 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 77.57 0.01 99.9 0 2 3 Whitelist PBCA-DE 0.62 0.19 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 3 116326984 116504479 1 1 62 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 77.57 99.95 0 0 3 4 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 4 47175521 135203694 1 7 62 3 2 0 0 2 0.14 0.07 8 0 0 8 5 8 9 5 5 77.57 99.87 0.02 0 3 2 Whitelist PBCA-DE 9 0.54 0.2 0 0 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 12 0.1 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 5 35873227 66087798 1 3 62 0 3 0 0 0 0.03 0.8 6 0 0 6 4 6 7 5 7 77.57 99.85 0 0 5 7 Whitelist PBCA-DE 0.41 0.95 0 0 0.33 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 6 63349475 127069607 1 3 62 0 3 0 0 0 0.03 0.79 4 0 0 4 4 4 5 5 5 77.57 99.86 0 0 4 5 Whitelist PBCA-DE 0.41 0.94 0 0 0.33 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 7 1389893 99781224 1 3 62 0 3 0 0 0 0.03 0.58 2 0.01 0 NA NA NA NA NA NA 77.57 99.78 0 0 4 5 Whitelist PBCA-DE 0.41 0.8 0.01 0 0.33 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 8 76863398 128771452 3 3 62 1 2 0 0 0 0.3 0.13 9 0 0 9 5 5 9 5 5 77.57 99.99 0 0 3 4 Whitelist PBCA-DE 0.62 0.33 0 0 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 6 0.05 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 9 14257092 102256404 1 5 62 0 4 0 0 1 0.01 0.03 8 0 0 8 8 8 9 9 9 77.57 99.29 0 0 3 4 Whitelist PBCA-DE 0.45 0.12 0 0 0.16 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 9 0.07 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 10 33535780 33590067 1 1 62 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 77.57 0.49 99.44 0 2 NA Whitelist PBCA-DE 0.62 0.62 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 11 NA NA 0 0 62 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.62 NA NA NA 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 12 6671658 21856958 1 2 62 0 2 0 0 0 0.11 1 5 NA 0 5 3 3 6 3 4 77.57 99.92 0 0 4 5 Whitelist PBCA-DE 0.54 1 NA 0 0.48 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 13 69676513 72469211 4 4 62 0 4 0 0 0 0.01 0 7 0 0 7 3 6 14 6 6 77.57 100 0 0 7 6 Whitelist PBCA-DE 0.21 0.01 0 0 0.16 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 8 0.06 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 14 20796292 21192542 1 1 62 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 5 5 77.57 99.09 0 0 3 4 Whitelist PBCA-DE 0.62 0.9 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 15 51337840 51837366 1 1 62 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.57 99.85 0 0 4 5 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 16 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 17 43239238 43512879 2 2 62 0 2 0 0 0 0.11 0.01 4 0 0 4 3 4 10 4 4 77.57 94.7 0 0 5 4 Whitelist PBCA-DE 0.54 0.03 0 0 0.48 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 4 0.03 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 18 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 19 29829951 31802339 1 1 62 0 1 0 0 0 0.39 0.12 2 NA NA NA NA NA 4 4 4 77.57 99.83 0 0 4 5 Whitelist PBCA-DE 0.62 0.31 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 20 35110855 35407945 1 1 62 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 77.57 0.47 98.49 0 2 3 Whitelist PBCA-DE 0.62 1 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 21 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 22 28960479 29029306 1 1 62 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 77.57 100 0 0 3 4 Whitelist PBCA-DE 0.62 0.76 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T27 X 66336321 66405542 1 1 62 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 77.57 99.96 0.04 0 1 2 Whitelist PBCA-DE 0.62 0.63 NA NA 0.59 0 No PBCA-DE MBRep_T27 PBCA 0.92 3.16 CNS-Medullo NA 2 0.02 NA 4 PBCA-DE DO35654 MBRep_T27 male alive C71 16 552 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 18.16 PBCA-DE::MBRep_T36 1 94016845 94037956 1 1 9 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 15.15 0 100 0 2 NA Whitelist PBCA-DE 0.62 0.76 NA NA 0.59 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 2 0.11 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 3 NA NA 0 0 9 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.32 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 7 NA NA 0 0 9 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.64 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 8 NA NA 0 0 9 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.63 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 10 NA NA 0 0 9 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.6 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 12 NA NA 0 0 9 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.6 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 14 78284089 78311835 1 1 9 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 15.15 43.08 53.2 0 2 NA Whitelist PBCA-DE 0.62 0.01 NA NA 0.59 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 2 0.11 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 17 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.45 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 18 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.45 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 20 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.06 NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T36 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T36 PBCA 0.98 1.89 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35668 MBRep_T36 male deceased C71 8 639 639 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 21.02 PBCA-DE::MBRep_T40 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 5 NA NA 0 0 6 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.57 NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 7 NA NA 0 0 6 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.53 NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 8 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.12 NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 19 21268384 21327859 1 1 6 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 14.32 41.48 58.35 0 2 NA Whitelist PBCA-DE 0.62 0.03 NA NA 0.59 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 20 NA NA 0 0 6 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.31 NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T40 X 62117324 62149251 1 1 6 0 0 1 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 14.32 99.77 0 0 1 NA Whitelist PBCA-DE 0.62 0.12 NA NA 0.59 0 No PBCA-DE MBRep_T40 PBCA 0.98 1.98 CNS-Medullo NA 2 0.17 NA 2 PBCA-DE DO35676 MBRep_T40 female deceased C71 9 2039 2039 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 67.07 PBCA-DE::MBRep_T41 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 3 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.21 NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 11 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.16 NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T41 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T41 PBCA 0.82 1.98 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35678 MBRep_T41 female deceased C71 9 4627 4627 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 152.2 PBCA-DE::MBRep_T54 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 2 NA NA 0 0 2 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.37 NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 12 NA NA 0 0 2 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.25 NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 17 20925698 21336206 1 1 2 0 0 0 1 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 30.26 94.49 0 0 1 3 Whitelist PBCA-DE 0.62 0.17 NA NA 0.59 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 2 0.5 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T54 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T54 PBCA 0.89 2.3 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35704 MBRep_T54 male alive C71 3 1583 NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 52.07 PBCA-DE::MBRep_T70 1 NA NA 0 0 11 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 2 NA NA 0 0 11 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 3 45293487 52645914 1 1 11 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA 4 3 3 86.58 99.82 0 0 1 3 Whitelist PBCA-DE 0.62 0.39 NA NA 0.59 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 2 0.09 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 4 105640014 105923543 1 1 11 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 86.58 99.98 0 0 4 5 Whitelist PBCA-DE 0.62 0.76 NA NA 0.59 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 2 0.09 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 5 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 7 NA NA 0 0 11 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 8 NA NA 0 0 11 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.69 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 10 NA NA 0 0 11 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.65 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 12 121899318 122098963 1 1 11 0 1 0 0 0 0.39 0.41 2 NA NA NA NA NA NA NA NA 86.58 99.98 0 0 4 5 Whitelist PBCA-DE 0.62 0.66 NA NA 0.59 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 2 0.09 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 13 57819172 58049443 1 1 11 1 0 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 86.58 100 0 0 4 NA Whitelist PBCA-DE 0.62 0.57 NA NA 0.59 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 2 0.09 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 14 NA NA 0 0 11 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.54 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 17 NA NA 0 0 11 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.12 NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T70 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T70 PBCA 0.85 3.92 CNS-Medullo NA 0 0 NA 4 PBCA-DE DO35721 MBRep_T70 male alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 1 42497406 45518039 1 1 32 0 1 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 13.78 1.21 98.47 0 2 3 Whitelist PBCA-DE 0.62 0.56 NA NA 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 2 NA NA 0 0 32 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.92 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 3 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 4 146480332 146879083 3 3 32 0 2 0 1 0 0.3 0 5 0 0 5 5 5 6 6 6 13.78 2.5 97.28 0 2 3 Whitelist PBCA-DE 0.62 0.02 0 0 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 6 0.09 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 5 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 6 NA NA 0 0 32 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.9 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 7 NA NA 0 0 32 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.49 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 8 NA NA 0 0 32 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.45 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 9 117502418 117782841 1 1 32 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 13.78 0.2 99.77 0 2 3 Whitelist PBCA-DE 0.62 0.04 0 NA 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 10 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 11 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 12 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 13 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 1 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 14 NA NA 0 0 32 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.51 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 15 NA NA 0 0 32 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.18 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 16 NA NA 0 0 32 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.44 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 17 NA NA 0 0 32 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.17 NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 18 25497542 70754625 1 1 32 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 13.78 57.96 42 0 2 3 Whitelist PBCA-DE 0.62 0.8 NA NA 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 20 10142047 25911081 1 1 32 0 1 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 13.78 0 99.9 0 2 NA Whitelist PBCA-DE 0.62 0.75 NA NA 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 22 38181021 38603657 1 1 32 0 1 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 13.78 0.82 99.18 0 2 3 Whitelist PBCA-DE 0.62 0.57 NA NA 0.59 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 2 0.03 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T71 X 15740075 15950730 2 2 32 0 0 1 1 0 0.57 0.22 4 0 0 4 4 4 5 5 5 13.78 99.97 0.03 0 1 2 Whitelist PBCA-DE 0.68 0.45 0 0 0.64 0 No PBCA-DE MBRep_T71 PBCA 0.92 1.99 CNS-Medullo NA 4 0.06 NA 2 PBCA-DE DO35723 MBRep_T71 female alive C71 9 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 0 NA PBCA-DE::MBRep_T72 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 2 NA NA 0 0 5 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.61 NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 3 94143347 96180699 1 1 5 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 15.36 1.03 95.7 0 2 3 Whitelist PBCA-DE 0.62 0.55 NA NA 0.59 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 2 0.2 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 5 NA NA 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.01 NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 11 NA NA 0 0 5 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.08 NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 14 NA NA 0 0 5 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.35 NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 20 NA NA 0 0 5 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA 0.27 NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PBCA-DE::MBRep_T72 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PBCA-DE NA NA NA NA NA 0 No PBCA-DE MBRep_T72 PBCA 0.92 2.02 CNS-Medullo NA 0 0 NA 2 PBCA-DE DO35725 MBRep_T72 male alive C71 11 578 578 Smoking history not documented NA Don't know/Not sure Not Documented Included CNS-Medullo PBCA DE 1 19.01 PRAD-CA::CPCG0001 1 107803390 108430731 5 5 183 3 1 0 1 0 0.28 0.89 7 0 0 7 7 7 7 7 7 8.14 0.19 99.81 0 2 1 Whitelist PRAD-CA 0.62 1 0 0 0.59 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 2 169739734 175334457 2 6 183 2 2 0 0 2 0.26 0 3 0 0 NA NA NA 7 7 7 8.14 1.52 98.39 0 2 1 Whitelist PRAD-CA 7 0.62 0 0 0 0.59 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 3 NA NA 0 0 183 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 4 NA NA 0 0 183 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.1 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 5 NA NA 0 0 183 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.61 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 6 73106289 128515137 14 19 183 6 3 3 2 5 0.46 0 10 0 0 10 10 10 16 12 12 8.14 29.67 70.15 0 1 2 Whitelist PRAD-CA 0.72 0 0 0 0.64 1 High confidence PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA Canonical without polyploidization 33 0.09 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 7 73196497 136189143 1 9 183 1 0 0 1 7 0.57 0 5 0 0 5 5 5 7 7 7 8.14 2.59 97.19 0 2 1 Whitelist PRAD-CA 6 0.85 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA Canonical without polyploidization 11 0.03 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 8 8260985 38335621 2 2 183 0 0 1 1 0 0.57 0.87 3 0 0 NA NA NA 7 7 7 8.14 21.2 78.77 0 1 2 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 9 NA NA 0 0 183 0 0 0 0 0 NA 0.34 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.59 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 10 22204562 111394841 1 3 183 1 0 0 1 1 0.57 0.07 1 0 0 NA NA NA NA NA NA 8.14 0.46 99.36 0 2 NA Whitelist PRAD-CA 13 0.62 0.21 0 0 0.64 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 11 NA NA 0 0 183 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.99 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 12 NA NA 0 0 183 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 6 3 6 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.36 0.01 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 13 66962166 101588334 4 8 183 1 1 1 1 4 1 0 5 0 0 5 5 5 5 5 5 8.14 3.9 81.77 0 2 1 Whitelist PRAD-CA 0.87 0 0 0 1 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 14 NA NA 0 0 183 0 0 0 0 0 NA 0.67 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.87 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 15 NA NA 0 0 183 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 16 NA NA 0 0 183 0 0 0 0 0 NA 0.82 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.96 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 17 NA NA 0 0 183 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 18 NA NA 0 0 183 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 NA NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 19 44386211 44972042 1 1 183 1 0 0 0 0 0.39 0.42 2 0 NA NA NA NA NA NA NA 8.14 0.99 98.84 0 1 2 Whitelist PRAD-CA 0.62 0.67 0 NA 0.59 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 20 NA NA 0 0 183 0 0 0 0 0 NA 0.3 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.54 0 NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 21 39874616 42866608 1 1 183 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 8.14 6.22 71.14 0 1 2 Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 22 NA NA 0 0 183 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0001 X 25482732 25496361 1 1 183 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 8.14 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.05 NA NA 0.59 1 No PRAD-CA CPCG0001 PRAD 0.54 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46787 CPCG0001 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 1 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 2 61268547 106138615 2 6 33 0 0 2 0 4 0.11 0 9 0 0 9 5 9 9 5 5 92.01 99.89 0 0 4 3 Whitelist PRAD-CA 0.54 0 0 0 0.48 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 8 0.12 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 3 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 4 155972625 156028638 1 1 33 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 92.01 99.8 0 0 3 4 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 2 0.03 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 5 NA NA 0 0 33 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 6 NA NA 0 0 33 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 7 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 8 NA NA 0 0 33 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 6 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.24 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 9 72570846 101972771 1 8 33 1 0 1 0 6 0.57 0 5 0 0 5 3 5 5 3 5 92.01 99.31 0.01 3 4 2 Whitelist PRAD-CA 0.62 0 0 0 0.64 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 10 0.15 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 11 NA NA 0 0 33 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 0 NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 12 NA NA 0 0 33 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 13 30182813 30865013 1 2 33 0 0 1 0 1 0.39 0.01 2 0 NA NA NA NA 4 3 3 92.01 85.85 0 0 3 4 Whitelist PRAD-CA 0.68 0.03 0 NA 0.59 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 3 0.05 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 14 75928966 81704300 1 1 33 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 92.01 84.09 0 0 4 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 2 0.03 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 16 NA NA 0 0 33 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.45 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 17 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 18 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 19 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 20 NA NA 0 0 33 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 21 NA NA 0 0 33 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0003 X NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0003 PRAD 0.52 3.83 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO46788 CPCG0003 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 1 49343084 242239089 1 3 57 0 1 2 0 0 0.3 0.8 1 0 0 NA NA NA NA NA NA 9.48 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.95 0 0 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 2 145734016 148792174 2 2 57 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 5 5 5 9.48 17.1 82.81 0 2 1 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 3 59293249 61811808 1 1 57 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 9.48 0.11 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 4 129768288 132297638 2 2 57 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 7 3 3 9.48 1.82 98.17 0 2 4 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 5 85713705 111436997 7 10 57 3 1 1 2 3 0.67 0 19 0 0 19 8 19 21 8 8 9.48 13.13 84.2 0 1 2 Whitelist PRAD-CA 0.96 0 0 0 0.74 1 High confidence PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA With other complex events 17 0.15 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 6 77681615 122444558 4 4 57 1 1 1 1 0 1 0 11 0 0 11 11 11 17 17 17 9.48 18.78 81.07 0 1 2 Whitelist PRAD-CA 1 0.01 0 0 1 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 8 0.07 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 7 4081893 115004431 1 6 57 2 3 1 0 0 0.34 0.03 8 0 0 8 7 8 9 7 7 9.48 3.78 93.34 0 2 1 Whitelist PRAD-CA 0.62 0.12 0 0 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 12 0.11 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 8 87575216 135609280 3 3 57 0 2 1 0 0 0.3 0.54 1 0 0 NA NA NA NA NA NA 9.48 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.77 0 0 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 9 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 10 NA NA 0 0 57 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 11 79986059 107538661 1 2 57 1 0 1 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 9.48 0.49 99.12 0 1 2 Whitelist PRAD-CA 0.68 1 NA 0 0.64 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 12 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 13 28995068 69137380 1 1 57 1 0 0 0 0 0.39 0.72 3 NA NA NA NA NA NA NA NA 9.48 25.13 74.87 0 2 1 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 14 28539436 28560051 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.48 0.02 99.07 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 16 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 18 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0020 X 23115997 23319021 1 1 57 1 0 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 9.48 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.62 NA NA 0.59 1 No PRAD-CA CPCG0020 PRAD 0.48 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO46790 CPCG0020 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 1 104892143 106788389 2 2 86 0 1 1 0 0 0.57 0.55 2 0 0 NA NA NA 13 13 13 10.56 15.86 84.14 0 1 2 Whitelist PRAD-CA 0.68 0.78 0 0 0.64 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 2 139897699 188690401 2 4 86 0 0 2 2 0 0.26 0.7 4 0 0 4 4 4 5 5 5 10.56 0.43 99.45 0 1 2 Whitelist PRAD-CA 0.62 0.89 0 0 0.59 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 3 143499142 173065536 1 8 86 3 0 1 0 4 0.11 0.13 10 0 0 10 10 10 11 11 11 10.56 0.38 99.58 0 1 2 Whitelist PRAD-CA 5 0.87 0.33 0 0 0.48 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 4 66000602 188117670 11 15 86 3 2 3 3 4 0.97 0 19 0 0 19 13 19 19 13 13 10.56 1.03 98.77 5 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.98 0 High confidence PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA Canonical without polyploidization 26 0.15 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 5 86238514 129489138 1 10 86 1 1 0 2 6 0.57 0 18 0 0 18 17 18 22 17 17 10.56 24.02 73.31 1 1 0 Whitelist PRAD-CA 3 0.68 0.02 0 0 0.64 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 14 0.08 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 6 55114640 97363829 1 3 86 1 0 0 1 1 0.57 1 5 0 0 5 3 5 5 3 3 10.56 9.26 90.59 0 2 1 Whitelist PRAD-CA 0.87 1 0 0 0.64 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 7 8940200 20434202 5 7 86 0 1 2 2 2 0.53 0.01 10 0 0 10 10 10 13 11 11 10.56 0.16 99.59 0 1 2 Whitelist PRAD-CA 0.68 0.03 0 0 0.64 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0040 8 2949934 33115490 1 2 86 1 1 0 0 0 0.57 0.33 1 NA 0.01 NA NA NA NA NA NA 10.56 0.02 99.98 0 2 NA Whitelist PRAD-CA 0.68 0.58 NA 0.01 0.64 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 9 10209514 10393279 1 1 86 0 0 1 0 0 0.39 0.27 2 NA NA NA NA NA 5 3 3 10.56 6.13 93.16 0 1 2 Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 10 84000395 111505524 1 1 86 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 5 5 10.56 20.39 76.2 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 11 NA NA 0 0 86 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 12 86858802 86872803 1 1 86 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA 5 3 3 10.56 0.16 99.76 0 2 NA Whitelist PRAD-CA 0.62 0.69 NA NA 0.59 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 13 32126601 68563196 1 1 86 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 3 3 10.56 31.66 68.34 0 1 2 Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 14 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 15 NA NA 0 0 86 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 16 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 17 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 18 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 19 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 20 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 21 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 22 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0040 X 53221476 142374783 2 6 86 0 0 1 3 2 0.11 0 1 0 0 NA NA NA NA NA NA 10.56 100 0 0 1 NA Whitelist PRAD-CA 4 0.54 0.02 0 0 0.48 0 Linked to high confidence PRAD-CA CPCG0040 PRAD 0.65 1.87 Prost-AdenoCA With other complex events 10 0.06 NA 2 PRAD-CA DO51044 CPCG0040 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 1 NA NA 0 0 299 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 2 138558355 144187164 1 2 299 1 0 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 10.67 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 3 79315782 84428502 1 4 299 2 0 1 0 1 0.3 0.17 1 0 0 NA NA NA NA NA NA 10.67 0 99.86 0 2 NA Whitelist PRAD-CA 0.68 0.39 0 0 0.59 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 7 0.01 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 4 163128818 163140320 1 1 299 1 0 0 0 0 0.39 0.82 1 0 NA NA NA NA NA NA NA 10.67 0 99.97 0 2 NA Whitelist PRAD-CA 0.62 0.96 0 NA 0.59 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 5 99459645 117301231 1 4 299 1 0 1 0 2 0.57 0.81 8 0 0 8 8 8 11 11 11 10.67 31.5 68.38 0 1 2 Whitelist PRAD-CA 0.68 0.96 0 0 0.64 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 6 85069940 92467188 1 2 299 2 0 0 0 0 0.11 0.46 4 0 0 4 4 4 9 7 9 10.67 0.19 96.84 0 1 2 Whitelist PRAD-CA 0.54 0.71 0 0 0.48 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 7 NA NA 0 0 299 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 8 NA NA 0 0 299 0 0 0 0 0 NA 0.43 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.68 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 9 NA NA 0 0 299 0 0 0 0 0 NA 0.55 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 10 NA NA 0 0 299 0 0 0 0 0 NA 0.58 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.8 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 11 NA NA 0 0 299 0 0 0 0 0 NA 0.89 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 12 NA NA 0 0 299 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.06 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 13 NA NA 0 0 299 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.43 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 14 NA NA 0 0 299 0 0 0 0 0 NA 0.24 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.48 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 15 NA NA 0 0 299 0 0 0 0 0 NA 0.72 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 16 NA NA 0 0 299 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.99 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 17 NA NA 0 0 299 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 18 NA NA 0 0 299 0 0 0 0 0 NA 0.72 NA 0 NA NA NA NA 12 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 19 NA NA 0 0 299 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 16 14 14 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 20 NA NA 0 0 299 0 0 0 0 0 NA 0.31 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.56 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 21 NA NA 0 0 299 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 22 35036042 35259896 1 1 299 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 10.67 0.44 98.54 0 1 2 Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0046 X NA NA 0 0 299 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.05 0 NA NA 0 No PRAD-CA CPCG0046 PRAD 0.66 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51045 CPCG0046 male alive C61 no treatment 79 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 1 NA NA 0 0 74 0 0 0 0 0 NA 0.38 NA 0.03 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 0.03 NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 2 72714202 72737569 1 1 74 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 7.61 0.13 99.75 0 2 NA Whitelist PRAD-CA 0.62 0.25 NA NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 3 136675748 141800438 1 1 74 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA 11 9 9 7.61 3.47 96.38 0 1 2 Whitelist PRAD-CA 0.62 0.39 NA NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 4 70107415 70173803 1 1 74 0 0 0 1 0 0.39 0.24 1 NA NA NA NA NA 5 3 3 7.61 2.12 97.87 0 2 NA Whitelist PRAD-CA 0.62 0.48 NA NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 5 58141508 132747188 5 8 74 1 2 1 1 3 0.9 0 13 0 0 13 8 13 19 12 19 7.61 13.96 85.9 0 1 2 Whitelist PRAD-CA 17 0.68 0.01 0 0 0.92 1 High confidence PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA Canonical without polyploidization 13 0.09 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 6 83479036 95555531 2 2 74 0 0 1 1 0 0.57 0.63 4 0 0 4 4 4 9 5 5 7.61 7.29 92.56 0 1 2 Whitelist PRAD-CA 0.68 0.84 0 0 0.64 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 7 26853227 54177585 1 4 74 1 0 1 0 2 0.57 0.29 3 0 0 NA NA NA 5 3 5 7.61 0.58 99.2 0 2 1 Whitelist PRAD-CA 5 0.68 0.54 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA With other complex events 6 0.04 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 8 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 9 9122527 10461450 1 1 74 0 1 0 0 0 0.39 0.22 4 0.01 NA 4 0 3 8 5 5 7.61 1.71 97.59 0 2 3 Whitelist PRAD-CA 0.62 0.45 0.01 NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 10 11524721 109091685 5 5 74 1 1 0 3 0 0.28 0.01 1 0 0 NA NA NA NA NA NA 7.61 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.03 0 0 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 10 0.07 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 11 NA NA 0 0 74 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 12 64169058 76472680 2 4 74 1 0 0 1 2 0.57 0.09 1 0 0 NA NA NA NA NA NA 7.61 0.08 99.83 0 2 NA Whitelist PRAD-CA 0.54 0.24 0 0 0.64 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 13 46217816 95052714 1 3 74 1 0 1 1 0 0.8 0.74 4 0 0 4 4 4 5 5 5 7.61 3.65 96.35 0 1 2 Whitelist PRAD-CA 0.87 0.91 0 0 0.84 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 14 69718589 81707875 1 1 74 0 0 1 0 0 0.39 0.51 1 0 NA NA NA NA NA NA NA 7.61 0 99.09 1 2 NA Whitelist PRAD-CA 0.62 0.75 0 NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 15 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 16 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 17 7344436 80003025 3 10 74 1 1 0 1 7 0.8 0 10 0 0 10 10 10 13 13 13 7.61 20.43 79.54 0 1 2 Whitelist PRAD-CA 5 0.96 0 0 0 0.84 1 High confidence PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA Canonical without polyploidization 13 0.09 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 18 68503982 68533731 1 1 74 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 5 5 5 7.61 0.53 99.44 0 1 2 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 19 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 20 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 21 39834144 44199722 9 9 74 4 3 1 1 0 0.39 0 5 0 0 5 5 5 7 5 5 7.61 0.52 76.84 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 Low confidence PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA Canonical without polyploidization 18 0.12 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 22 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0047 X 73799816 73998410 1 1 74 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 7.61 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0047 PRAD 0.62 1.91 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578527_G_A,CN:1 2 PRAD-CA DO51046 CPCG0047 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 1 25759499 196892218 1 4 70 1 1 0 0 2 0.57 1 1 0 0 NA NA NA NA NA NA 8.78 0 100 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 2 42479071 207089883 5 14 70 2 1 1 1 9 0.9 0 1 0 0 NA NA NA NA NA NA 8.78 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.92 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 19 0.14 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 3 5168186 119236120 1 4 70 4 0 0 0 0 0.01 0.15 5 0 0 5 5 5 5 5 5 8.78 0.29 99.66 0 2 1 Whitelist PRAD-CA 0.21 0.36 0 0 0.16 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 4 167356157 181913557 5 5 70 2 1 1 1 0 0.9 0.05 7 0 0 7 3 7 9 5 5 8.78 2.52 97.3 0 2 1 Whitelist PRAD-CA 0.93 0.17 0 0 0.92 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 5 21717815 22022094 1 1 70 0 0 0 1 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 8.78 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 6 66817577 68705203 3 3 70 0 0 2 1 0 0.3 0 1 0 0 NA NA NA NA NA NA 8.78 0 99.85 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 7 84579509 84929148 1 1 70 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 8.78 0 99.77 0 2 NA Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 8 28348704 29119499 1 2 70 0 0 0 1 1 0.39 0.59 1 NA NA NA NA NA NA NA NA 8.78 19.25 80.63 0 2 NA Whitelist PRAD-CA 0.68 0.81 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 9 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 10 101157615 106115705 5 5 70 2 1 1 1 0 0.9 0.14 1 0 0 NA NA NA NA NA NA 8.78 0 99.82 0 2 NA Whitelist PRAD-CA 0.93 0.33 0 0 0.92 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 11 100810954 111334997 1 2 70 1 1 0 0 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 8.78 0.06 95.74 0 2 NA Whitelist PRAD-CA 0.68 0.07 0 0 0.64 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 12 131591313 132473634 1 1 70 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 8.78 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 13 32283342 73735487 1 1 70 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 8.78 35.99 64.01 0 1 2 Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 14 NA NA 0 0 70 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.73 NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 15 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 16 34680140 35099940 1 1 70 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA NA NA NA 8.78 44.1 51.36 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 17 8176172 44790680 2 5 70 1 1 0 2 1 0.57 0 3 0 0 NA NA NA 5 5 5 8.78 2.62 97.37 0 2 1 Whitelist PRAD-CA 0.93 0.02 0 0 0.64 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 18 38271340 38324826 2 2 70 0 0 1 1 0 0.57 0.71 1 NA 0 NA NA NA NA NA NA 8.78 0 99.94 0 2 NA Whitelist PRAD-CA 0.68 0.9 NA 0 0.64 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 19 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 20 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 21 39864833 42875764 1 2 70 2 0 0 0 0 0.11 0.21 3 NA 0 NA NA NA NA NA NA 8.78 6.13 71.22 0 2 1 Whitelist PRAD-CA 0.54 0.44 NA 0 0.48 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 22 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0048 X NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0048 PRAD 0.33 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51047 CPCG0048 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 1 NA NA 0 0 58 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 2 121092817 135708550 2 2 58 0 0 1 1 0 0.57 0.82 1 0 0 NA NA NA NA NA NA 13.38 0.02 99.89 0 2 NA Whitelist PRAD-CA 0.68 0.96 0 0 0.64 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 3 125163266 179035673 17 21 58 4 4 4 5 4 0.98 0 5 0 0 5 3 5 9 3 3 13.38 0.2 99.77 0 2 1 Whitelist PRAD-CA 1 0 0 0 0.99 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 38 0.33 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 4 185912227 186697229 1 1 58 1 0 0 0 0 0.39 0.06 1 0 NA NA NA NA 13 7 7 13.38 7.26 92.53 0 2 NA Whitelist PRAD-CA 0.62 0.18 0 NA 0.59 0 High confidence PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA Canonical without polyploidization 2 0.02 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0057 5 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 6 0 171115067 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA 8 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 High confidence PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA Canonical without polyploidization 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0057 7 NA NA 0 0 58 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 14 8 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 8 34234803 38151902 2 5 58 1 1 0 0 3 0.57 0.01 4 0 0 4 4 4 9 5 5 13.38 21.48 78.52 0 1 2 Whitelist PRAD-CA 0.93 0.04 0 0 0.64 0 High confidence PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA Canonical without polyploidization 7 0.06 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0057 9 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 10 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 11 38500462 86941286 1 2 58 1 0 1 0 0 0.57 0.35 8 0 0 8 3 4 12 7 7 13.38 2.08 97.49 0 2 4 Whitelist PRAD-CA 0.68 0.6 0 0 0.64 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 12 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 13 43451157 104415981 1 1 58 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 13.38 52.93 47.07 0 1 2 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 14 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 15 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 16 0 90354753 0 0 58 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.43 NA NA NA 0 High confidence PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA Canonical without polyploidization 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0057 17 27944925 38511402 1 2 58 0 0 1 0 1 0.39 0 3 0 NA NA NA NA 7 7 7 13.38 28.35 67.22 0 1 2 Whitelist PRAD-CA 0.68 0.01 0 NA 0.59 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 3 0.03 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 18 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 19 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 20 3585883 13834780 1 1 58 0 0 1 0 0 0.39 1 3 NA NA NA NA NA 5 5 5 13.38 1.21 97.83 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 21 36210144 42872983 2 5 58 2 0 0 0 3 0.11 0 4 0 0 4 3 4 5 3 3 13.38 13.84 63.51 0 1 0 Whitelist PRAD-CA 0.62 0 0 0 0.48 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 7 0.06 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 22 NA NA 0 0 58 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0057 X NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0057 PRAD 0.56 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51048 CPCG0057 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 1 67264650 228859059 1 3 29 1 1 0 0 1 0.57 0.28 3 0 0 NA NA NA 4 4 4 91.9 100 0 0 4 5 Whitelist PRAD-CA 0.62 0.53 0 0 0.64 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 5 0.09 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 2 138474657 212715589 1 2 29 2 0 0 0 0 0.11 0.73 4 0 0 4 3 4 5 3 5 91.9 99.87 0.01 0 4 2 Whitelist PRAD-CA 0.54 0.91 0 0 0.48 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 4 0.07 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 3 71297 638081 2 2 29 0 0 1 1 0 0.57 1 4 NA 0.03 4 3 4 5 3 4 91.9 99.95 0.04 0 4 1 Whitelist PRAD-CA 0.68 1 NA 0.03 0.64 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 4 0.07 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 4 126272955 142431723 1 2 29 2 0 0 0 0 0.11 0.13 2 0 0 NA NA NA NA NA NA 91.9 99.99 0.01 0 2 4 Whitelist PRAD-CA 0.54 0.32 0 0 0.48 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 4 0.07 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 5 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 6 78329678 118935619 1 2 29 2 0 0 0 0 0.11 0.03 3 0 0 NA NA NA NA NA NA 91.9 77.73 22.15 0 4 2 Whitelist PRAD-CA 0.54 0.1 0 0 0.48 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 4 0.07 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 7 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 8 101969435 114294208 1 4 29 1 0 1 0 2 0.57 0.06 2 0 0 NA NA NA 8 0 3 91.9 99.21 0.79 0 2 6 Whitelist PRAD-CA 0.68 0.18 0 0 0.64 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 6 0.1 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 9 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 10 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 12 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 13 28518801 58530266 2 2 29 1 0 0 1 0 0.57 0.26 5 NA 0 5 3 5 6 3 3 91.9 62.9 22.94 0 2 4 Whitelist PRAD-CA 0.68 0.51 NA 0 0.64 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 4 0.07 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 14 37956157 38060025 1 1 29 0 1 0 0 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 91.9 84.08 0 0 4 NA Whitelist PRAD-CA 0.62 0.82 NA NA 0.59 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 2 0.03 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 15 NA NA 0 0 29 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 17 NA NA 0 0 29 0 0 0 0 0 NA 0.55 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0063 X NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0063 PRAD 0.37 3.87 Prost-AdenoCA NA 0 0 NA 4 PRAD-CA DO51049 CPCG0063 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 1 157348359 248809399 1 3 71 0 0 1 1 1 0.57 0.82 1 0 0 NA NA NA NA NA NA 10.37 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.96 0 0 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 2 140332699 226811403 1 3 71 1 1 0 0 1 0.57 0.83 3 0 0 NA NA NA 5 3 5 10.37 0.03 99.86 0 2 0 Whitelist PRAD-CA 0.62 0.97 0 0 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 3 18220971 165733287 1 4 71 3 0 0 0 1 0.03 0.64 8 0 0 8 5 8 9 5 9 10.37 4.77 95.09 0 2 0 Whitelist PRAD-CA 0.21 0.85 0 0 0.33 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 4 70087919 70135783 1 1 71 0 0 1 0 0 0.39 0.63 1 0 NA NA NA NA NA NA NA 10.37 0 99.8 0 2 NA Whitelist PRAD-CA 0.62 0.84 0 NA 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 5 NA NA 0 0 71 0 0 0 0 0 NA 0.63 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.84 0 NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 6 52652644 144905244 1 9 71 0 2 1 2 4 0.53 0 5 0 0 5 3 5 7 3 5 10.37 0.71 99.14 0 2 0 Whitelist PRAD-CA 0.62 0 0 0 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 14 0.1 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 7 29672657 141794558 1 2 71 2 0 0 0 0 0.11 0.11 8 0 0 8 6 7 10 6 7 10.37 0.28 97.05 0 2 0 Whitelist PRAD-CA 0.54 0.28 0 0 0.48 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 8 NA NA 0 0 71 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 9 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 10 NA NA 0 0 71 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.34 0 NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 11 50072985 71290654 1 4 71 1 0 2 0 1 0.3 0 5 0 0 5 3 5 9 4 4 10.37 5.64 93.93 0 1 2 Whitelist PRAD-CA 0.68 0.01 0 0 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 12 10150940 107463732 1 2 71 1 0 1 0 0 0.57 0.78 5 NA 0.04 5 3 5 5 3 5 10.37 0.67 95.59 0 2 0 Whitelist PRAD-CA 0.68 0.93 NA 0.04 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 13 58241729 58268305 1 1 71 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 10.37 0.02 85.82 0 1 2 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 14 94145751 106841609 1 3 71 2 1 0 0 0 0.3 0.29 3 0 0 NA NA NA 7 7 7 10.37 4.29 80.24 0 1 2 Whitelist PRAD-CA 0.62 0.53 0 0 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 15 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 16 NA NA 0 0 71 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 17 NA NA 0 0 71 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 18 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 19 20801305 53350481 1 2 71 0 1 1 0 0 0.57 0.16 3 NA 0 NA NA NA NA NA NA 10.37 0.05 92.68 0 2 1 Whitelist PRAD-CA 0.68 0.37 NA 0 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 20 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 21 39862353 42873890 1 7 71 1 0 0 1 5 0.57 0 3 0 0 NA NA NA 5 5 5 10.37 0.19 77.17 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 22 25686354 25982879 1 1 71 0 1 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 10.37 0.58 75.64 0 1 2 Whitelist PRAD-CA 0.62 0.8 NA NA 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0073 X 57619079 57936382 1 1 71 0 0 1 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 10.37 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 0 No PRAD-CA CPCG0073 PRAD 0.73 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51050 CPCG0073 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 1 NA NA 0 0 75 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 2 25650975 207023107 1 2 75 1 1 0 0 0 0.57 0.09 6 NA 0 6 5 6 7 5 5 12.77 5.57 94.33 0 2 3 Whitelist PRAD-CA 0.68 0.25 NA 0 0.64 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 3 102500885 131983073 2 6 75 1 0 0 1 4 0.57 0.01 5 0 0 5 5 5 7 7 7 12.77 0.44 99.44 0 2 1 Whitelist PRAD-CA 7 0.68 0.03 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA Canonical without polyploidization 8 0.05 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 4 NA NA 0 0 75 0 0 0 0 0 NA 0.16 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.37 0 NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 5 4363592 157342065 2 2 75 0 1 0 1 0 0.57 0.63 7 NA 0.49 7 5 7 7 5 5 12.77 7.65 92.23 0 2 0 Whitelist PRAD-CA 0.68 0.84 NA 0.49 0.64 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 6 169700195 169773816 2 2 75 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 12.77 0 99.77 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 7 87564783 152327924 13 17 75 3 4 4 2 4 0.84 0 15 0 0 15 9 9 19 12 12 12.77 26.59 73.34 0 2 1 Whitelist PRAD-CA 3 0.99 0 0 0 0.88 1 High confidence PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA Canonical without polyploidization 30 0.2 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 8 24695593 145137532 2 2 75 0 1 0 1 0 0.57 0.79 7 0.12 0 7 0 4 10 4 4 12.77 55.63 44.37 0 2 4 Whitelist PRAD-CA 0.68 0.95 0.12 0 0.64 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 9 9108862 9284753 1 1 75 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 10 4 7 12.77 34.26 63.2 0 2 3 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 10 NA NA 0 0 75 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 11 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 12 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 13 32840367 48125540 3 6 75 1 0 1 1 3 0.8 0 7 0 0 7 5 5 15 7 7 12.77 25.02 60.83 0 1 2 Whitelist PRAD-CA 15 0.93 0 0 0 0.84 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 14 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 15 39340057 58305145 2 6 75 1 0 0 1 4 0.57 0.02 6 0 0 6 6 6 7 7 7 12.77 6.18 78.28 0 1 2 Whitelist PRAD-CA 13 0.93 0.07 0 0 0.64 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 16 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 17 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 18 NA NA 0 0 75 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 19 NA NA 0 0 75 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 20 14962131 15400571 1 1 75 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.77 0 99.03 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 21 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 22 NA NA 0 0 75 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.19 NA NA NA 1 No PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0078 X 116709463 133375527 1 2 75 0 0 1 0 1 0.39 1 1 NA NA NA NA NA NA NA NA 12.77 100 0 0 1 NA Whitelist PRAD-CA 7 0.68 1 NA NA 0.59 1 Linked to high confidence PRAD-CA CPCG0078 PRAD 0.39 2.01 Prost-AdenoCA With other complex events 3 0.02 NA 2 PRAD-CA DO51051 CPCG0078 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 1 1717687 161601354 1 5 104 0 1 1 1 2 0.8 0.58 3 0.06 0.02 NA NA NA NA NA NA 14.26 0.53 99.46 0 2 1 Whitelist PRAD-CA 0.93 0.81 0.06 0.02 0.84 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 2 58366431 62639127 1 2 104 0 0 0 1 1 0.39 0.11 1 0 NA NA NA NA NA NA NA 14.26 0 99.91 0 2 NA Whitelist PRAD-CA 0.68 0.28 0 NA 0.59 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 3 58128103 64491539 2 4 104 0 0 1 1 2 0.57 0.05 2 0 0 NA NA NA 9 9 9 14.26 1.35 98.62 0 1 2 Whitelist PRAD-CA 11 0.68 0.16 0 0 0.64 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 4 61376930 63940529 8 8 104 2 1 3 2 0 0.8 0 5 0 0 5 3 5 9 5 5 14.26 1.89 98.08 0 2 0 Whitelist PRAD-CA 0.87 0.01 0 0 0.84 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 16 0.08 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 5 45719887 45732280 1 1 104 1 0 0 0 0 0.39 0.22 2 0 NA NA NA NA 6 3 3 14.26 0.13 97.14 0 1 2 Whitelist PRAD-CA 0.62 0.45 0 NA 0.59 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 6 19834754 126088633 2 4 104 0 1 1 2 0 0.57 0.84 3 0 0 NA NA NA NA NA NA 14.26 23.79 76.07 0 2 1 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 7 141765514 141794439 1 1 104 1 0 0 0 0 0.39 0.66 1 0 NA NA NA NA NA NA NA 14.26 0 99.76 0 2 NA Whitelist PRAD-CA 0.62 0.87 0 NA 0.59 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 8 32420590 38183164 3 11 104 1 1 0 1 8 0.8 0 5 0 0 5 3 5 7 3 6 14.26 98.29 1.71 0 3 1 Whitelist PRAD-CA 0.98 0.01 0 0 0.84 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 14 0.07 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 9 28464174 33001413 2 2 104 0 0 1 1 0 0.57 0.31 1 0 0 NA NA NA NA NA NA 14.26 0 99.33 0 2 NA Whitelist PRAD-CA 0.68 0.55 0 0 0.64 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 10 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 11 10810305 11901670 2 4 104 0 2 0 0 2 0.11 0 4 0 0 4 4 4 11 11 11 14.26 2.32 97.25 0 1 2 Whitelist PRAD-CA 0.54 0 0 0 0.48 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 12 48471063 57125235 3 3 104 0 1 1 1 0 0.8 0.64 1 0 0 NA NA NA NA NA NA 14.26 0 99.92 0 2 NA Whitelist PRAD-CA 0.87 0.85 0 0 0.84 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 13 NA NA 0 0 104 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.52 NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 14 NA NA 0 0 104 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 15 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 16 NA NA 0 0 104 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 0 NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 17 5098486 6944986 2 3 104 1 1 0 0 1 0.57 0.21 5 0 0 5 5 5 7 7 7 14.26 2.57 97.42 0 1 2 Whitelist PRAD-CA 0.87 0.44 0 0 0.64 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 18 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 19 34797909 35133391 1 1 104 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 14.26 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 20 NA NA 0 0 104 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 21 39823806 42864450 1 8 104 1 1 1 0 5 0.8 0 1 0 0 NA NA NA NA NA NA 14.26 0 77.6 0 2 NA Whitelist PRAD-CA 22 0.62 0 0 0 0.84 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 11 0.05 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 22 17604195 38204157 2 9 104 1 1 0 0 7 0.57 0 5 0 0 5 5 5 7 7 7 14.26 17.21 82.79 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 11 0.05 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0081 X 1130252 1206314 1 1 104 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 14.26 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.2 NA NA 0.59 0 No PRAD-CA CPCG0081 PRAD 0.6 1.95 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51052 CPCG0081 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 1 NA NA 0 0 51 0 0 0 0 0 NA 0.6 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 0 NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 2 169329060 169385828 1 1 51 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 11.67 0.02 99.88 0 1 2 Whitelist PRAD-CA 0.62 0.69 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 3 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 4 154202278 176537550 1 6 51 2 1 0 1 2 0.57 0 8 0 0 8 8 8 9 9 9 11.67 6.31 93.67 0 1 2 Whitelist PRAD-CA 0.93 0.01 0 0 0.64 0 High confidence PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA Canonical without polyploidization 10 0.1 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0083 5 59620402 106825968 1 2 51 2 0 0 0 0 0.11 0.77 3 NA 0 NA NA NA 5 3 5 11.67 0.12 97.2 0 2 1 Whitelist PRAD-CA 0.54 0.93 NA 0 0.48 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 6 67084764 141966516 10 13 51 3 1 3 3 3 0.75 0 6 0 0 6 3 5 6 3 4 11.67 11.19 88.66 0 2 4 Whitelist PRAD-CA 4 0.9 0 0 0 0.83 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 23 0.23 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 7 NA NA 0 0 51 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 9 9188300 9262973 1 1 51 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 11.67 0 99.29 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 10 47654420 51489108 1 1 51 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 11.67 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 11 18268576 104978077 1 2 51 1 0 0 1 0 0.57 0.09 4 0 0 4 0 3 6 3 3 11.67 2.46 97.12 0 2 0 Whitelist PRAD-CA 0.68 0.25 0 0 0.64 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 12 42788739 54467112 3 5 51 0 1 1 1 2 0.8 0.09 6 0 0 6 6 6 7 7 7 11.67 2.85 97.14 0 1 2 Whitelist PRAD-CA 0.68 0.25 0 0 0.84 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 8 0.08 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 13 111708917 114222585 1 1 51 1 0 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 11.67 2.18 82.84 0 1 NA Whitelist PRAD-CA 0.62 0.89 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 15 66281846 85670440 1 1 51 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 11.67 0 84.59 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 16 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 17 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 20 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 21 39955067 42867021 1 3 51 1 0 0 1 1 0.57 0 1 0 0 NA NA NA NA NA NA 11.67 0 77.47 0 2 NA Whitelist PRAD-CA 0.87 0.02 0 0 0.64 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 5 0.05 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 22 39425836 39445947 1 1 51 0 1 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 11.67 0 76.22 0 2 NA Whitelist PRAD-CA 0.62 0.7 NA NA 0.59 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0083 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0083 PRAD 0.67 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51053 CPCG0083 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 1 53862264 153760543 1 3 96 0 0 2 1 0 0.3 0.09 1 0 0 NA NA NA NA NA NA 11.65 0.02 99.98 0 2 NA Whitelist PRAD-CA 0.62 0.25 0 0 0.59 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 2 191862841 201550606 2 4 96 1 1 0 0 2 0.57 0.46 3 0 0 NA NA NA 5 3 5 11.65 0.01 99.88 0 2 0 Whitelist PRAD-CA 0.68 0.7 0 0 0.64 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 3 71477330 186530637 1 5 96 1 0 1 0 3 0.57 0.84 5 0 0 5 5 5 6 6 6 11.65 19.65 80.32 0 1 2 Whitelist PRAD-CA 10 0.68 0.98 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA Canonical without polyploidization 7 0.04 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 4 NA NA 0 0 96 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.66 0 NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 5 60392219 125829510 1 4 96 4 0 0 0 0 0.01 0.83 6 0 0 6 3 6 10 5 5 11.65 23.46 73.83 0 1 2 Whitelist PRAD-CA 0.21 0.97 0 0 0.16 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 6 NA NA 0 0 96 0 0 0 0 0 NA 0.52 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 0 NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 7 14657826 20657692 1 2 96 0 0 1 1 0 0.57 0.18 3 0 0 NA NA NA 7 5 5 11.65 0.61 99.17 0 2 1 Whitelist PRAD-CA 0.68 0.39 0 0 0.64 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 8 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 9 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 10 65582868 91714710 6 10 96 3 0 2 1 4 0.34 0 13 0 0 13 10 13 13 10 10 11.65 4.63 95.19 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.59 1 High confidence PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA Canonical without polyploidization 16 0.08 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 11 60030378 117020757 1 7 96 1 0 1 0 5 0.57 0 1 0 0 NA NA NA NA NA NA 11.65 0.05 99.53 0 2 NA Whitelist PRAD-CA 0.96 0 0 0 0.64 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 9 0.05 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 12 89973906 123851732 2 5 96 0 0 1 1 3 0.57 0.22 3 0 0 NA NA NA 5 3 5 11.65 0.06 99.56 0 2 1 Whitelist PRAD-CA 10 0.93 0.45 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA With other complex events 7 0.04 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 13 30417450 96351929 1 3 96 1 0 1 0 1 0.57 0.58 3 0 0 NA NA NA NA NA NA 11.65 3.77 96.23 0 2 1 Whitelist PRAD-CA 0.87 0.8 0 0 0.64 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 14 106037469 106157541 1 1 96 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 11.65 0.03 99.05 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 15 NA NA 0 0 96 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.92 NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 16 14022069 80914402 1 11 96 2 0 1 1 7 0.57 0 1 0 0 NA NA NA 4 3 3 11.65 9.63 90.03 0 2 NA Whitelist PRAD-CA 10 0.87 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA With other complex events 15 0.08 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 17 NA NA 0 0 96 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.16 0 NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 18 NA NA 0 0 96 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 19 NA NA 0 0 96 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.14 NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 20 NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 21 37556239 45075023 1 9 96 3 0 0 0 6 0.03 0 1 0 0 NA NA NA NA NA NA 11.65 40.57 29.58 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.33 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 12 0.06 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 22 NA NA 0 0 96 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.03 NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0087 X NA NA 0 0 96 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0087 PRAD 0.62 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51054 CPCG0087 male alive C61 no treatment 73 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 1 8589683 155821955 15 33 75 5 4 2 4 18 0.74 0 10 0 0 10 5 8 11 6 6 19.33 23.41 76.59 0 1 2 Whitelist PRAD-CA 2 0.84 0 0 0 0.82 0 Low confidence PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA With other complex events 48 0.32 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 2 13930709 194034058 1 10 75 1 0 0 1 8 0.57 0 8 0 0 8 6 8 9 7 7 19.33 34.02 65.86 0 2 1 Whitelist PRAD-CA 1_6 0.62 0.03 0 0 0.64 0 Linked to low confidence PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA Canonical without polyploidization 12 0.08 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 3 10567626 71290155 2 4 75 0 1 1 0 2 0.57 1 5 0.16 0 5 3 5 7 3 3 19.33 1.02 98.93 0 1 2 Whitelist PRAD-CA 0.68 1 0.16 0 0.64 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 4 90008142 91317812 1 1 75 0 1 0 0 0 0.39 0.06 2 NA NA NA NA NA 7 3 3 19.33 0.71 99.12 0 2 3 Whitelist PRAD-CA 0.62 0.19 NA NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 5 10160706 180218226 2 2 75 0 0 1 1 0 0.57 0.63 17 0 0 17 3 6 18 3 5 19.33 3.61 93.71 0 2 0 Whitelist PRAD-CA 0.68 0.84 0 0 0.64 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 6 66692329 126941783 1 1 75 1 0 0 0 0 0.39 1 6 0 0 6 5 6 11 5 6 19.33 35.24 64.62 0 1 0 Whitelist PRAD-CA 0.62 1 0 0 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 7 136042118 136530790 1 1 75 0 1 0 0 0 0.39 0.8 3 0 NA NA NA NA 11 5 7 19.33 0.6 96.54 0 2 3 Whitelist PRAD-CA 0.62 0.95 0 NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 8 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 9 10244655 11798385 3 3 75 1 0 1 1 0 0.8 0 5 0 0 5 3 3 16 3 5 19.33 0.78 98.55 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.84 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 10 89629515 90128820 1 1 75 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 19.33 99.83 0 0 0 1 Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 11 NA NA 0 0 75 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 11 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 12 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 13 23582500 33221383 6 6 75 2 1 1 2 0 0.88 0 5 0 0 5 5 5 6 5 5 19.33 64.82 35.18 0 2 3 Whitelist PRAD-CA 0.93 0.01 0 0 0.91 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 12 0.08 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 14 90253191 97255921 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 19.33 6.52 92.56 0 1 2 Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 15 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 16 71762835 73919087 1 2 75 0 0 1 0 1 0.39 1 3 NA NA NA NA NA 4 4 4 19.33 20 79.65 0 1 2 Whitelist PRAD-CA 0.68 1 NA NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 17 6815586 7900314 1 1 75 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 19.33 1.34 98.66 0 1 2 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 18 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 19 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 20 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 21 34821531 42877149 3 3 75 2 1 0 0 0 0.3 0.06 3 0 0 NA NA NA NA NA NA 19.33 0.09 77.26 0 2 1 Whitelist PRAD-CA 0.62 0.2 0 0 0.59 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 22 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0094 X NA NA 0 0 75 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 0 No PRAD-CA CPCG0094 PRAD 0.46 1.79 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51055 CPCG0094 male alive C61 no treatment 78 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 1 106583198 201142084 1 5 66 0 0 1 0 4 0.39 0.65 9 0 0 9 6 9 11 7 11 8.66 1.3 98.7 0 1 2 Whitelist PRAD-CA 0.68 0.86 0 0 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 2 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 3 9484749 71638725 1 2 66 2 0 0 0 0 0.11 0.33 4 NA 0 4 4 4 5 5 5 8.66 1.81 98.14 0 1 2 Whitelist PRAD-CA 0.54 0.58 NA 0 0.48 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 4 182500566 182573894 1 1 66 0 0 1 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 8.66 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 5 11310976 59113191 1 1 66 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 8.66 22.19 77.67 0 2 3 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 6 80448970 80720658 1 1 66 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 8.66 0.16 99.7 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 7 124805737 127652931 1 1 66 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.66 0 97.45 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 8 69673174 121023873 1 2 66 0 0 1 0 1 0.39 0.58 1 0 0 NA NA NA NA NA NA 8.66 0 99.99 0 2 NA Whitelist PRAD-CA 0.68 0.8 0 0 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 9 121088355 121351215 2 3 66 1 1 0 0 1 0.57 0 4 0 0 4 4 4 13 5 7 8.66 26.42 72.91 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.64 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 10 89574904 106091553 1 2 66 2 0 0 0 0 0.11 0.77 4 NA 0 4 3 4 7 5 7 8.66 2.81 93.6 0 2 0 Whitelist PRAD-CA 0.54 0.93 NA 0 0.48 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 11 NA NA 0 0 66 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 12 75934454 79808986 1 1 66 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 3 5 8.66 3.04 93.22 0 1 2 Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 13 24230995 114613419 1 8 66 1 0 0 1 6 0.57 0 3 0 0 NA NA NA NA NA NA 8.66 2.72 96.79 0 2 1 Whitelist PRAD-CA 1_22 1 0.01 0 0 0.64 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 10 0.08 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 14 NA NA 0 0 66 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 15 NA NA 0 0 66 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 16 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 17 14628067 43912822 1 3 66 1 1 0 0 1 0.57 0 1 0 0 NA NA NA NA NA NA 8.66 8.45 91.55 0 2 NA Whitelist PRAD-CA 0.87 0.01 0 0 0.64 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 18 NA NA 0 0 66 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 19 35792212 49163182 10 10 66 5 3 1 1 0 0.22 0 9 0 0 9 9 9 13 13 13 8.66 8.29 84.38 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA Canonical without polyploidization 20 0.15 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 20 NA NA 0 0 66 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.17 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 21 39878517 42868092 1 1 66 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA 4 3 4 8.66 6.21 64.46 0 1 2 Whitelist PRAD-CA 0.62 0.78 NA NA 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 22 20842422 38870678 3 6 66 0 0 1 2 3 0.3 0 5 0 0 5 5 5 7 7 7 8.66 10.78 89.22 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 9 0.07 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0095 X NA NA 0 0 66 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0095 PRAD 0.63 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51056 CPCG0095 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 1 225690789 234758315 1 1 100 1 0 0 0 0 0.39 0.36 2 0 NA NA NA NA NA NA NA 15.06 3.64 96.36 0 1 2 Whitelist PRAD-CA 0.62 0.61 0 NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 2 36769612 48111816 1 1 100 0 0 0 1 0 0.39 0.86 3 0 0 NA NA NA NA NA NA 15.06 4.66 95.23 0 2 1 Whitelist PRAD-CA 0.62 0.99 0 0 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 3 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 4 NA NA 0 0 100 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 0 NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 5 54848262 57880071 1 2 100 0 0 0 1 1 0.39 0.84 1 0 NA NA NA NA NA NA NA 15.06 30.13 69.73 0 2 NA Whitelist PRAD-CA 0.68 0.97 0 NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 6 80395987 95133658 11 11 100 3 2 3 3 0 0.97 0 16 0 0 16 16 16 19 19 19 15.06 4.37 95.46 0 1 2 Whitelist PRAD-CA 0.98 0 0 0 0.98 1 High confidence PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA Canonical without polyploidization 22 0.11 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 7 91756616 127127712 2 4 100 0 0 1 1 2 0.57 0.07 4 0 0 4 4 4 11 9 11 15.06 4.96 94.8 0 1 2 Whitelist PRAD-CA 0.68 0.21 0 0 0.64 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 8 29049394 43006111 4 4 100 3 1 0 0 0 0.11 0 2 0 0 NA NA NA 7 6 6 15.06 59.9 40.1 6 1 2 Whitelist PRAD-CA 0.54 0 0 0 0.48 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 9 73899097 123362702 2 2 100 0 0 1 1 0 0.57 0.6 1 0 0 NA NA NA NA NA NA 15.06 0.12 99.74 0 2 NA Whitelist PRAD-CA 0.68 0.81 0 0 0.64 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 10 NA NA 0 0 100 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 11 69374747 69527493 1 1 100 0 0 1 0 0 0.39 0.47 2 0 NA NA NA NA 11 5 5 15.06 0.63 98.95 0 1 2 Whitelist PRAD-CA 0.62 0.72 0 NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 12 28419885 28469622 1 1 100 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 8 6 6 15.06 23.79 76.13 0 0 1 Whitelist PRAD-CA 0.62 0.04 0 NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 13 42366442 43673254 1 2 100 0 0 1 0 1 0.39 1 3 NA NA NA NA NA 5 5 5 15.06 37.51 62.49 0 1 2 Whitelist PRAD-CA 0.68 1 NA NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 14 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 15 NA NA 0 0 100 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 16 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 17 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 18 33322700 34032521 1 1 100 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 15.06 0.91 99.06 0 2 3 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 19 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 20 NA NA 0 0 100 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 21 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 22 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0098 X 26243883 91967097 7 7 100 2 1 2 2 0 0.93 0 10 0 0 10 10 10 15 15 15 15.06 100 0 0 0 1 Whitelist PRAD-CA 0.96 0 0 0 0.95 1 High confidence PRAD-CA CPCG0098 PRAD 0.69 1.93 Prost-AdenoCA Canonical without polyploidization 14 0.07 NA 2 PRAD-CA DO51057 CPCG0098 male alive C61 no treatment 80 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 1 80830451 242530692 1 4 116 3 0 0 0 1 0.03 0.22 6 0 0 6 6 6 9 9 9 21.32 10.19 89.81 0 1 2 Whitelist PRAD-CA 0.21 0.46 0 0 0.33 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 2 56129968 56170281 2 2 116 0 0 1 1 0 0.57 0.87 1 0 0 NA NA NA 5 3 3 21.32 25.13 74.78 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 3 2818500 86464570 1 3 116 3 0 0 0 0 0.03 0.07 5 0.15 0 5 3 5 5 3 5 21.32 0.11 99.72 0 2 0 Whitelist PRAD-CA 0.41 0.2 0.15 0 0.33 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 4 155555537 183584345 3 3 116 1 0 1 1 0 0.8 0.06 10 0 0 10 8 10 21 8 8 21.32 15.48 84.3 0 1 2 Whitelist PRAD-CA 0.87 0.19 0 0 0.84 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 5 49962437 111461751 8 9 116 4 2 1 1 1 0.39 0 23 0 0 23 10 23 27 10 12 21.32 30.13 67.2 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA With other complex events 17 0.07 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 6 27840534 134371152 1 3 116 2 0 0 0 1 0.11 0.33 6 0 0 6 3 6 7 4 4 21.32 36.47 63.29 0 1 2 Whitelist PRAD-CA 0.62 0.58 0 0 0.48 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 7 48017345 154624761 20 20 116 5 8 4 3 0 0.42 0 46 0 0 46 6 21 52 11 26 21.32 91.56 8.42 3 3 2 Whitelist PRAD-CA 0.66 0 0 0 0.63 1 Low confidence PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA With other complex events 40 0.17 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 8 4281679 137943749 2 2 116 1 1 0 0 0 0.57 0.83 6 0 0 6 6 6 7 7 7 21.32 22.84 77.04 0 1 2 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 9 11247991 31410161 1 3 116 3 0 0 0 0 0.03 0.63 6 0 0 6 6 6 7 7 7 21.32 2.79 97.2 0 1 2 Whitelist PRAD-CA 0.41 0.84 0 0 0.33 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 10 20258735 26018961 4 4 116 1 1 1 1 0 1 0.82 6 0 0 6 6 6 9 9 9 21.32 20.23 79.54 0 1 2 Whitelist PRAD-CA 1 0.96 0 0 1 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 11 59827239 101404837 5 5 116 3 0 1 1 0 0.28 0.66 8 0 0 8 4 8 11 5 11 21.32 1 95.82 0 2 1 Whitelist PRAD-CA 0.62 0.87 0 0 0.59 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 10 0.04 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 12 119127021 130890168 2 2 116 0 0 1 1 0 0.57 0.5 4 0 0 4 4 4 11 5 5 21.32 9.65 90.27 0 1 2 Whitelist PRAD-CA 0.68 0.75 0 0 0.64 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 13 39322923 85482219 1 1 116 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 21.32 40.08 59.92 0 1 2 Whitelist PRAD-CA 0.62 0.42 NA NA 0.59 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 14 37289479 37695761 1 1 116 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 21.32 0.38 99.62 0 2 3 Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 16 31901146 58727908 1 2 116 1 1 0 0 0 0.57 0.77 2 NA 0 NA NA NA NA NA NA 21.32 10.04 89.86 0 1 2 Whitelist PRAD-CA 0.68 0.93 NA 0 0.64 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 17 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 18 3428772 3468321 1 1 116 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 21.32 0.05 99.94 0 2 3 Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 19 37025998 37081052 1 1 116 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 21.32 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 20 NA NA 0 0 116 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 21 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 22 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0099 X NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0099 PRAD 0.62 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46792 CPCG0099 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 1 203794945 203826975 1 3 26 0 0 0 1 2 0.39 0 1 0 0 NA NA NA NA NA NA 8.58 0.02 99.98 0 2 NA Whitelist PRAD-CA 0.87 0.02 0 0 0.59 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 3 0 198022430 0 0 26 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.28 NA NA NA 0 High confidence PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA Canonical without polyploidization 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0102 4 NA NA 0 0 26 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 6 15443014 21598217 2 3 26 1 0 1 0 1 0.57 0.02 1 0 0 NA NA NA NA NA NA 8.58 0 99.78 0 2 NA Whitelist PRAD-CA 0.87 0.07 0 0 0.64 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 5 0.1 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 7 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 10 39105286 39119570 1 1 26 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 11 6 6 8.58 32.7 67.12 0 2 NA Whitelist PRAD-CA 0.62 0.01 0 NA 0.59 0 High confidence PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA Canonical without polyploidization 2 0.04 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0102 11 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 12 NA NA 0 0 26 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.6 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 13 0 115169878 0 0 26 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA 11 11 11 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.18 NA NA NA 0 High confidence PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA Canonical without polyploidization 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0102 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 16 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 19 NA NA 0 0 26 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 21 NA NA 0 0 26 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0102 X NA NA 0 0 26 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0102 PRAD 0.24 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46793 CPCG0102 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 1 NA NA 0 0 64 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.19 NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 2 NA NA 0 0 64 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 3 11421883 194134697 2 8 64 0 2 1 1 4 0.57 0.01 4 0 0 4 4 4 5 5 5 11.15 0.58 99.29 0 1 2 Whitelist PRAD-CA 0.68 0.06 0 0 0.64 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 12 0.09 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 4 NA NA 0 0 64 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.13 0 NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 5 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 6 47174222 111964716 1 2 64 1 0 1 0 0 0.57 0.59 2 NA 0 NA NA NA NA NA NA 11.15 0.01 99.84 0 1 2 Whitelist PRAD-CA 0.68 0.81 NA 0 0.64 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 7 4188644 141224271 1 5 64 0 1 0 2 2 0.3 0 4 0 0 4 3 4 4 3 3 11.15 0.37 96.96 0 2 0 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 8 26175897 32934433 3 3 64 1 1 0 1 0 0.8 0 1 0 0 NA NA NA 5 5 5 11.15 41 55.58 5 1 NA Whitelist PRAD-CA 0.87 0.01 0 0 0.84 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 9 71813442 89952392 1 2 64 0 0 1 1 0 0.57 0.74 1 NA 0 NA NA NA NA NA NA 11.15 0 99.3 0 2 NA Whitelist PRAD-CA 0.68 0.91 NA 0 0.64 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 10 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 11 NA NA 0 0 64 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.77 0 NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 12 8137459 124070385 1 3 64 0 0 1 1 1 0.57 1 5 NA 0.01 5 5 5 5 5 5 11.15 0.16 96.09 0 2 0 Whitelist PRAD-CA 0.62 1 NA 0.01 0.64 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 13 NA NA 0 0 64 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 0 NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 14 NA NA 0 0 64 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 15 85867303 87254182 2 2 64 0 0 1 1 0 0.57 0.26 1 NA 0 NA NA NA NA NA NA 11.15 0 84.48 0 2 NA Whitelist PRAD-CA 0.68 0.5 NA 0 0.64 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 16 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 17 7537761 59368936 1 2 64 2 0 0 0 0 0.11 0.1 1 0.01 0 NA NA NA NA NA NA 11.15 3.53 96.46 0 2 NA Whitelist PRAD-CA 0.54 0.26 0.01 0 0.48 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 18 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 19 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 20 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 21 24489763 42872049 1 7 64 2 2 0 0 3 0.26 0 1 0 0 NA NA NA NA NA NA 11.15 0 77.44 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 11 0.09 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 22 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0121 X NA NA 0 0 64 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0121 PRAD 0.36 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51060 CPCG0121 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 1 8088899 52728774 1 5 144 1 0 0 1 3 0.57 0.12 3 0.05 0 NA NA NA NA NA NA 10.19 2.44 97.56 0 2 1 Whitelist PRAD-CA 0.62 0.3 0.05 0 0.64 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 2 32918330 74219519 7 7 144 2 1 2 2 0 0.93 0.01 7 0 0 7 7 7 19 19 19 10.19 3.98 93.32 0 2 1 Whitelist PRAD-CA 0.96 0.03 0 0 0.95 1 High confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 14 0.05 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 3 30806945 33484145 3 3 144 2 1 0 0 0 0.3 0.33 1 0 0 NA NA NA 7 5 5 10.19 1.87 97.99 0 2 NA Whitelist PRAD-CA 0.62 0.58 0 0 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 4 40113263 89954086 9 18 144 2 4 2 1 9 0.55 0 5 0 0 5 5 5 7 7 7 10.19 0.5 99.28 0 2 1 Whitelist PRAD-CA 0.99 0 0 0 0.64 1 Low confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 27 0.09 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 5 NA NA 0 0 144 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.13 NA NA NA 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 6 68837487 116989816 1 3 144 2 0 1 0 0 0.3 0.05 3 0 0 NA NA NA 5 5 5 10.19 1.4 98.47 0 2 1 Whitelist PRAD-CA 0.62 0.17 0 0 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 7 28375608 76749449 1 3 144 3 0 0 0 0 0.03 0.71 4 0 0 4 4 4 7 5 5 10.19 0.9 98.88 0 1 2 Whitelist PRAD-CA 0.41 0.9 0 0 0.33 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 8 22894046 144595974 13 13 144 0 5 4 4 0 0.21 0.01 7 0 0 7 7 7 7 7 7 10.19 21.21 78.79 0 1 2 Whitelist PRAD-CA 0.62 0.04 0 0 0.59 1 High confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 26 0.09 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 9 35133750 37896162 5 5 144 1 2 1 1 0 0.9 0 1 0 0 NA NA NA NA NA NA 10.19 0.08 99.75 3 2 NA Whitelist PRAD-CA 0.93 0 0 0 0.92 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 10 75239971 97413754 2 4 144 1 0 0 1 2 0.57 0.55 5 0 0 5 5 5 7 7 7 10.19 2.08 97.74 0 2 1 Whitelist PRAD-CA 17 0.68 0.77 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 11 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 12 82855222 82883028 1 1 144 1 0 0 0 0 0.39 0.55 1 0 NA NA NA NA NA NA NA 10.19 0.15 99.76 0 2 NA Whitelist PRAD-CA 0.62 0.78 0 NA 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 13 71750798 75835320 1 1 144 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 10.19 3.55 96.45 0 1 2 Whitelist PRAD-CA 0.62 0.2 NA NA 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 14 105589291 105688312 3 3 144 0 1 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 10.19 1.8 97.29 0 2 NA Whitelist PRAD-CA 0.87 1 0 0 0.84 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 15 NA NA 0 0 144 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.95 NA NA NA 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 16 NA NA 0 0 144 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 17 27075680 55017524 6 17 144 0 2 3 1 11 0.34 0 9 0 0 9 9 9 15 15 15 10.19 10.03 89.95 0 1 2 Whitelist PRAD-CA 10_4 0.93 0 0 0 0.59 1 High confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 23 0.08 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 18 59349968 59507058 1 1 144 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 10.19 0.2 99.76 3 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 19 53775291 53815463 1 1 144 0 0 1 0 0 0.39 0.37 1 0 NA NA NA NA NA NA NA 10.19 1.42 98.41 0 2 NA Whitelist PRAD-CA 0.62 0.62 0 NA 0.59 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 20 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 21 39872551 47609493 2 4 144 1 0 1 0 2 0.57 0.1 2 0 0 NA NA NA NA NA NA 10.19 6.23 70.04 0 1 2 Whitelist PRAD-CA 0.68 0.27 0 0 0.64 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 22 27281417 43536139 3 6 144 1 0 1 1 3 0.8 0 8 0 0 8 8 8 11 11 11 10.19 13.34 86.66 0 1 2 Whitelist PRAD-CA 2 0.93 0 0 0 0.84 1 Linked to high confidence PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA Canonical without polyploidization 9 0.03 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0123 X 69866284 131081379 1 3 144 2 0 0 0 1 0.11 0.85 1 0 0 NA NA NA NA NA NA 10.19 99.44 0 0 1 NA Whitelist PRAD-CA 0.41 0.98 0 0 0.48 1 No PRAD-CA CPCG0123 PRAD 0.44 1.9 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51061 CPCG0123 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 1 47850520 98316762 1 2 121 1 1 0 0 0 0.57 0.01 2 NA 0 NA NA NA 7 5 5 10.52 16.72 83.28 0 1 2 Whitelist PRAD-CA 0.68 0.03 NA 0 0.64 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 2 NA NA 0 0 121 0 0 0 0 0 NA 0 NA NA NA NA NA NA 17 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 3 64640778 69066915 1 20 121 2 0 0 0 18 0.11 0 5 0 0 5 0 4 16 5 10 10.52 16.41 83.47 0 1 2 Whitelist PRAD-CA 8 0.62 0 0 0 0.48 1 Linked to low confidence PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA With other complex events 22 0.09 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 4 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 5 54480010 57784932 1 1 121 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 17 4 11 10.52 2.08 95.26 0 1 2 Whitelist PRAD-CA 0.62 0.04 NA NA 0.59 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 6 NA NA 0 0 121 0 0 0 0 0 NA 0.12 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.31 0 NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 7 101040304 101072170 1 1 121 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 7 3 5 10.52 0.34 99.43 0 1 2 Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 8 5872316 42557666 15 46 121 4 4 3 4 31 0.98 0 14 0 0 14 4 7 17 7 10 10.52 8.34 91.66 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.99 1 Low confidence PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA With other complex events 61 0.25 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 9 9210020 38442582 1 5 121 0 1 1 0 3 0.57 0.24 6 0 0 6 6 6 9 7 7 10.52 14.77 84.56 0 1 2 Whitelist PRAD-CA 10 0.68 0.48 0 0 0.64 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 10 48369342 119949558 1 13 121 3 1 1 1 7 0.57 0 19 0 0 19 10 19 21 10 10 10.52 16.63 79.94 0 1 2 Whitelist PRAD-CA 13_9 0.99 0.01 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA With other complex events 19 0.08 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 11 NA NA 0 0 121 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA 11 3 6 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 12 52217184 118439956 2 3 121 1 0 1 0 1 0.57 0.83 1 0 0 NA NA NA 5 3 5 10.52 0.15 96.11 0 2 NA Whitelist PRAD-CA 0.87 0.97 0 0 0.64 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 13 29235366 111679206 12 19 121 3 4 2 3 7 0.88 0 13 0 0 13 13 13 15 15 15 10.52 17.89 82.11 0 2 1 Whitelist PRAD-CA 10 0.62 0 0 0 0.91 1 High confidence PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA Canonical without polyploidization 31 0.13 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 14 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 15 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 16 57158916 64744096 2 18 121 1 0 0 1 16 0.57 0 5 0 0 5 5 5 9 9 9 10.52 11.34 88.57 0 1 2 Whitelist PRAD-CA 8 0.87 0 0 0 0.64 1 Linked to low confidence PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA Canonical without polyploidization 20 0.08 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 17 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 18 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 19 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 20 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 21 39867659 42867027 1 1 121 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 10.52 15.8 62.03 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 22 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0124 X NA NA 0 0 121 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.54 NA NA NA 1 No PRAD-CA CPCG0124 PRAD 0.47 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51062 CPCG0124 male alive C61 no treatment 72 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 1 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 2 29458291 97478348 1 2 63 1 0 1 0 0 0.57 0.49 1 0.01 0 NA NA NA NA NA NA 5.11 0 99.89 0 2 NA Whitelist PRAD-CA 0.68 0.74 0.01 0 0.64 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 3 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 4 180254329 181539208 3 3 63 1 0 1 1 0 0.8 0.2 1 0 0 NA NA NA NA NA NA 5.11 0.02 99.97 0 2 NA Whitelist PRAD-CA 0.87 0.42 0 0 0.84 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 5 103758263 168334916 3 4 63 2 1 0 0 1 0.3 0.06 1 0 0 NA NA NA 4 0 0 5.11 0.1 97.22 0 2 NA Whitelist PRAD-CA 0.68 0.19 0 0 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 7 0.06 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 6 52652922 52691459 1 1 63 1 0 0 0 0 0.39 0.79 1 0 NA NA NA NA NA NA NA 5.11 0 99.87 0 2 NA Whitelist PRAD-CA 0.62 0.94 0 NA 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 7 158926270 158956305 1 1 63 0 0 1 0 0 0.39 0.39 1 0 NA NA NA NA NA NA NA 5.11 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.64 0 NA 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 8 71806592 137864173 4 6 63 1 1 1 1 2 1 0 2 0 0 NA NA NA NA NA NA 5.11 0.29 99.7 0 1 2 Whitelist PRAD-CA 0.93 0.02 0 0 1 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 10 0.08 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 9 NA NA 0 0 63 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 10 48571658 92507601 6 6 63 1 1 2 2 0 0.88 0.01 1 0 0 NA NA NA NA NA NA 5.11 0.46 99.36 0 2 NA Whitelist PRAD-CA 0.93 0.04 0 0 0.91 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 12 0.1 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 11 30988772 125590934 1 4 63 1 0 0 1 2 0.57 0.54 3 0 0 NA NA NA NA NA NA 5.11 0.1 99.47 0 2 0 Whitelist PRAD-CA 0.68 0.77 0 0 0.64 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 12 29218567 108935030 3 4 63 0 0 1 2 1 0.3 0.07 4 0 0 4 0 3 4 0 3 5.11 0.09 99.82 0 2 0 Whitelist PRAD-CA 0.54 0.22 0 0 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 7 0.06 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 13 NA NA 0 0 63 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 14 21675581 106841848 1 3 63 2 0 0 1 0 0.3 0.45 1 0.02 0 NA NA NA NA NA NA 5.11 0 96.73 0 2 NA Whitelist PRAD-CA 0.62 0.7 0.02 0 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 15 45190883 45281234 1 1 63 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.11 0 100 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 16 53359009 63867794 1 1 63 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.11 0 99.91 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 17 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 18 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 19 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 20 NA NA 0 0 63 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 21 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 22 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0127 X NA NA 0 0 63 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0127 PRAD 0.64 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51063 CPCG0127 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 1 NA NA 0 0 84 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.06 NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 2 57746139 137270112 15 15 84 6 2 4 3 0 0.51 0 19 0 0 19 12 19 19 12 12 8.43 0.5 99.4 1 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 High confidence PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA Canonical without polyploidization 30 0.18 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 3 148678910 160049487 2 2 84 0 0 1 1 0 0.57 0.83 2 0 0 NA NA NA 5 5 5 8.43 0.11 99.76 0 1 2 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 4 18477094 35223917 6 6 84 2 0 2 2 0 0.57 0 14 0 0 14 14 14 26 26 26 8.43 6.97 93.01 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0128 5 162475887 167502461 6 6 84 0 0 3 3 0 0.11 0.04 10 0 0 10 10 10 13 13 13 8.43 18.22 81.65 0 1 2 Whitelist PRAD-CA 0.54 0.14 0 0 0.48 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 6 77654737 78047183 1 1 84 0 0 1 0 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 8.43 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.73 NA NA 0.59 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 7 106208873 123387813 13 15 84 4 3 3 3 2 0.97 0 20 0 0 20 20 20 21 21 21 8.43 3.61 96.16 0 1 2 Whitelist PRAD-CA 0.93 0 0 0 0.98 0 High confidence PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA Canonical without polyploidization 28 0.17 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 8 82150418 87351738 4 4 84 0 1 2 1 0 0.57 0.32 10 0 0 10 10 10 13 13 13 8.43 8.03 91.96 0 1 2 Whitelist PRAD-CA 0.68 0.58 0 0 0.64 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 9 NA NA 0 0 84 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 10 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 11 88808522 100669515 1 1 84 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 8.43 0 99.57 0 2 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 12 8995962 14883820 1 1 84 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 8.43 4.4 95.52 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 13 46248857 101080156 1 2 84 1 0 0 1 0 0.57 1 3 NA 0 NA NA NA NA NA NA 8.43 15.98 84.02 0 2 1 Whitelist PRAD-CA 0.68 1 NA 0 0.64 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 14 37090328 37478426 1 1 84 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.43 0.36 98.72 0 2 3 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 15 30266004 45786157 2 2 84 0 0 1 1 0 0.57 1 4 NA 0 4 4 4 5 5 5 8.43 15.11 84.76 0 1 2 Whitelist PRAD-CA 0.68 1 NA 0 0.64 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 16 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 17 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 18 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 19 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 20 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 21 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 22 NA NA 0 0 84 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0128 X 86192145 86203904 1 1 84 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 8.43 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 0 No PRAD-CA CPCG0128 PRAD 0.76 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51064 CPCG0128 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 1 90511937 104454487 2 4 79 0 1 1 0 2 0.57 0.01 10 0 0 10 5 10 29 13 29 7.82 7.07 92.93 0 2 1 Whitelist PRAD-CA 22 0.68 0.05 0 0 0.64 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 2 34562938 36107871 2 2 79 0 0 1 1 0 0.57 0.41 2 0 0 NA NA NA 25 11 25 7.82 0.47 99.42 0 1 2 Whitelist PRAD-CA 0.68 0.66 0 0 0.64 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 3 74125264 78215589 2 5 79 0 1 0 1 3 0.57 0 7 0 0 7 7 7 41 15 23 7.82 2.13 97.81 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 7 0.04 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 4 127356539 127422215 1 1 79 1 0 0 0 0 0.39 0.65 2 0 NA NA NA NA 27 19 27 7.82 2.63 97.18 0 1 2 Whitelist PRAD-CA 0.62 0.86 0 NA 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 5 37374601 38840086 1 1 79 1 0 0 0 0 0.39 0.1 2 0 NA NA NA NA 18 11 14 7.82 1.33 98.55 0 1 2 Whitelist PRAD-CA 0.62 0.26 0 NA 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 6 21775462 116193189 1 5 79 1 0 1 1 2 0.8 0.81 16 0 0 16 11 16 21 11 21 7.82 0.67 99.19 0 2 0 Whitelist PRAD-CA 0.68 0.96 0 0 0.84 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 7 50980659 51043890 1 1 79 1 0 0 0 0 0.39 0.8 1 NA NA NA NA NA 16 8 9 7.82 0.71 96.72 0 2 NA Whitelist PRAD-CA 0.62 0.95 NA NA 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 8 84804734 120742573 1 3 79 0 0 0 1 2 0.39 0.12 3 0 0 NA NA NA 9 9 9 7.82 0.07 99.92 0 2 0 Whitelist PRAD-CA 3 0.87 0.31 0 0 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 9 NA NA 0 0 79 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 13 13 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 10 70013082 118145871 1 5 79 0 1 1 1 2 0.8 0.41 3 0 0 NA NA NA 5 3 5 7.82 4.02 92.59 0 2 1 Whitelist PRAD-CA 0.93 0.66 0 0 0.84 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 11 NA NA 0 0 79 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA 14 13 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.4 0 NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 12 41871673 107239693 7 24 79 2 0 1 4 17 0.17 0 19 0 0 19 11 19 25 12 20 7.82 1.97 94.26 0 2 1 Whitelist PRAD-CA 0.54 0 0 0 0.59 1 High confidence PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA With other complex events 31 0.2 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 13 35784454 95461876 1 2 79 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 7.82 37.29 48.55 0 1 2 Whitelist PRAD-CA 0.54 1 NA 0 0.48 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 15 NA NA 0 0 79 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.73 NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 16 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 17 NA NA 0 0 79 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 18 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 19 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 20 NA NA 0 0 79 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 21 39865202 42870063 1 1 79 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 6 3 6 7.82 6.42 61.99 0 1 2 Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 22 27490991 29470992 1 4 79 0 0 0 1 3 0.39 0 5 0 0 5 5 5 7 7 7 7.82 4.62 71.6 0 2 1 Whitelist PRAD-CA 1 0.62 0.02 0 0 0.59 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0154 X NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0154 PRAD 0.4 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51065 CPCG0154 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 1 54281512 62321091 3 3 114 1 1 0 1 0 0.8 0.38 5 0 0 5 5 5 7 7 7 16.62 1.61 98.38 0 2 1 Whitelist PRAD-CA 0.87 0.63 0 0 0.84 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 2 8882095 193497924 3 3 114 1 1 1 0 0 0.8 0.31 5 0 0 5 5 5 5 5 5 16.62 0.83 99.06 1 2 1 Whitelist PRAD-CA 0.87 0.56 0 0 0.84 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 3 70597771 72874939 2 2 114 0 0 1 1 0 0.57 0.14 2 0 0 NA NA NA 4 3 3 16.62 30.41 69.56 0 1 2 Whitelist PRAD-CA 0.68 0.34 0 0 0.64 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 4 26323776 181747689 1 8 114 0 0 3 1 4 0.11 0.85 1 0 0 NA NA NA NA NA NA 16.62 0 99.78 0 2 NA Whitelist PRAD-CA 0.62 0.99 0 0 0.48 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 5 95680597 129073006 2 2 114 0 0 1 1 0 0.57 0.12 2 0 0 NA NA NA NA NA NA 16.62 18.46 81.42 0 1 2 Whitelist PRAD-CA 0.68 0.31 0 0 0.64 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 6 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 7 38307844 131180183 5 13 114 1 1 1 2 8 0.9 0 16 0 0 16 7 7 16 7 7 16.62 65.55 31.9 0 2 3 Whitelist PRAD-CA 0.68 0 0 0 0.92 1 High confidence PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA With other complex events 18 0.08 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 8 NA NA 0 0 114 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.97 0 NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 9 16144809 36234382 2 4 114 0 1 1 0 2 0.57 0.05 1 0 0 NA NA NA 7 7 7 16.62 1.57 97.76 0 2 NA Whitelist PRAD-CA 1 0.15 0 0 0.64 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 10 45016764 98266172 1 2 114 2 0 0 0 0 0.11 1 4 0.02 0 4 3 4 9 3 3 16.62 60.44 36.1 0 1 0 Whitelist PRAD-CA 0.54 1 0.02 0 0.48 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 11 62551851 62572285 1 1 114 0 0 0 1 0 0.39 0.07 1 NA NA NA NA NA 7 4 4 16.62 0.76 95.62 0 2 NA Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 12 57702096 123638012 1 2 114 1 1 0 0 0 0.57 0.18 3 NA 0 NA NA NA 5 3 5 16.62 0.24 96.02 0 2 1 Whitelist PRAD-CA 0.68 0.4 NA 0 0.64 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 13 NA NA 0 0 114 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 14 NA NA 0 0 114 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 15 65283070 66687481 1 2 114 0 0 0 1 1 0.39 1 1 NA NA NA NA NA NA NA NA 16.62 0 100 0 2 NA Whitelist PRAD-CA 0.68 1 NA NA 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 16 21968140 22131532 1 1 114 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 4 4 16.62 24.79 75.12 0 1 2 Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 17 NA NA 0 0 114 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 18 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 19 NA NA 0 0 114 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 20 26127345 62406063 35 41 114 5 11 10 9 6 0.5 0 52 0 0 52 11 28 52 11 11 16.62 15.85 76.79 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.64 1 High confidence PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA With other complex events 76 0.33 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 21 39857092 42879790 1 1 114 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.62 6.28 64.01 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 22 19123795 19175311 1 2 114 1 0 0 0 1 0.39 0 2 0 NA NA NA NA 9 5 5 16.62 51.34 37.55 0 2 3 Whitelist PRAD-CA 0.68 0 0 NA 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0158 X 11224463 14050459 1 4 114 0 0 1 0 3 0.39 1 1 0 0 NA NA NA NA NA NA 16.62 100 0 0 1 NA Whitelist PRAD-CA 0.62 1 0 0 0.59 1 No PRAD-CA CPCG0158 PRAD 0.56 1.92 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51066 CPCG0158 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 1 64280405 222074952 12 27 126 6 2 1 3 15 0.2 0 16 0 0 16 14 16 19 14 14 13.26 9.49 90.51 1 1 2 Whitelist PRAD-CA 16 0.84 0 0 0 0.59 1 High confidence PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA Canonical without polyploidization 39 0.15 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 2 NA NA 0 0 126 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.22 0 NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 3 48728863 50035918 2 2 126 1 1 0 0 0 0.57 0.86 1 0 0 NA NA NA 4 3 3 13.26 0.82 99.09 0 2 NA Whitelist PRAD-CA 0.68 0.99 0 0 0.64 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 4 NA NA 0 0 126 0 0 0 0 0 NA 0.15 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.35 0 NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 5 10077396 71802762 2 8 126 2 0 0 0 6 0.11 0 6 0 0 6 3 6 13 5 9 13.26 9.4 87.9 0 2 1 Whitelist PRAD-CA 1_16 0.87 0 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA With other complex events 10 0.04 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 6 NA NA 0 0 126 0 0 0 0 0 NA 0.71 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 0 NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 7 NA NA 0 0 126 0 0 0 0 0 NA 0.55 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 0 NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 8 116898911 117050769 1 1 126 1 0 0 0 0 0.39 0.22 1 0 NA NA NA NA NA NA NA 13.26 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.45 0 NA 0.59 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 9 NA NA 0 0 126 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 10 89626569 95441303 6 6 126 3 1 1 1 0 0.57 0.39 5 0 0 5 5 5 9 5 5 13.26 32.22 64.36 0 1 0 Whitelist PRAD-CA 0.68 0.63 0 0 0.64 1 Low confidence PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 11 44102169 134252202 1 5 126 0 0 0 2 3 0.11 0.2 3 0 0 NA NA NA NA NA NA 13.26 0.16 99.41 0 2 4 Whitelist PRAD-CA 0.62 0.42 0 0 0.48 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 12 416416 104525848 2 2 126 0 1 1 0 0 0.57 0.83 4 0 0 4 0 4 4 0 0 13.26 0.1 99.88 0 2 0 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 13 35185529 106330698 1 1 126 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 13.26 61.77 24.07 0 1 2 Whitelist PRAD-CA 0.62 0.58 NA NA 0.59 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 14 NA NA 0 0 126 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 15 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 16 74306345 83503516 3 12 126 1 0 2 0 9 0.3 0 6 0 0 6 6 6 7 7 7 13.26 3.69 96.21 0 1 2 Whitelist PRAD-CA 1 0.68 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA Canonical without polyploidization 15 0.06 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 17 NA NA 0 0 126 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 18 45390371 46982711 3 3 126 1 0 1 1 0 0.8 0.58 4 0 0 4 4 4 6 5 6 13.26 95.33 0 0 0 1 Whitelist PRAD-CA 0.87 0.81 0 0 0.84 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 19 42724521 42835615 1 1 126 1 0 0 0 0 0.39 0.74 1 0 NA NA NA NA NA NA NA 13.26 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.91 0 NA 0.59 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 20 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 21 39868975 42872122 2 4 126 1 0 0 1 2 0.57 0.02 1 0 0 NA NA NA NA NA NA 13.26 0 77.72 0 2 NA Whitelist PRAD-CA 0.62 0.08 0 0 0.64 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 22 38888792 39151324 1 1 126 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.26 23.78 65.11 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0166 X NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0166 PRAD 0.18 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51067 CPCG0166 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 1 210341919 239956135 1 1 44 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA 5 3 5 8.67 11.89 88.1 0 1 2 Whitelist PRAD-CA 0.62 0.5 NA NA 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 2 25993726 207556298 1 10 44 1 0 1 1 7 0.8 0 7 0 0 7 5 7 9 7 9 8.67 0.56 99.34 0 2 0 Whitelist PRAD-CA 0.62 0.01 0 0 0.84 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 13 0.15 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 3 131635656 185491527 2 2 44 1 1 0 0 0 0.57 0 5 0 0 5 3 5 15 7 13 8.67 2.95 93.99 0 2 0 Whitelist PRAD-CA 0.68 0.02 0 0 0.64 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 4 NA NA 0 0 44 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 5 91947238 111095336 1 1 44 1 0 0 0 0 0.39 0.75 4 NA 0 4 3 4 13 5 13 8.67 10.79 86.53 0 1 2 Whitelist PRAD-CA 0.62 0.92 NA 0 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 6 NA NA 0 0 44 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 7 62228963 118342470 1 2 44 1 0 0 1 0 0.57 1 4 NA 0 4 3 4 7 5 7 8.67 0.54 96.8 0 2 0 Whitelist PRAD-CA 0.68 1 NA 0 0.64 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 8 68860634 69458912 1 1 44 1 0 0 0 0 0.39 0.49 2 NA NA NA NA NA 5 3 5 8.67 0.42 99.57 0 1 2 Whitelist PRAD-CA 0.62 0.73 NA NA 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 9 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 10 51557579 90579019 1 1 44 0 0 0 1 0 0.39 0.72 4 NA NA 4 3 4 7 3 4 8.67 31.27 65.27 0 1 0 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 11 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 12 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 13 45559303 49782600 1 1 44 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.67 0 85.85 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 14 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 15 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 16 NA NA 0 0 44 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 17 42276225 56780682 1 2 44 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 5 5 5 8.67 1.58 98.42 0 1 2 Whitelist PRAD-CA 0.68 0.01 0 0 0.64 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 18 56587460 56598143 1 1 44 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 8.67 0 99.94 0 2 NA Whitelist PRAD-CA 0.62 0.58 NA NA 0.59 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 19 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 21 39860981 42874409 3 3 44 0 1 1 1 0 0.8 0 5 0 0 5 5 5 8 8 8 8.67 14.25 63.58 0 2 1 Whitelist PRAD-CA 0.87 0.01 0 0 0.84 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 22 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0182 X NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0182 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51068 CPCG0182 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 1 156833257 199547943 3 3 124 1 0 1 1 0 0.8 0.74 10 0 0 10 10 10 13 13 13 11.43 1.83 98.17 0 1 2 Whitelist PRAD-CA 0.87 0.91 0 0 0.84 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 2 138940415 164545433 2 4 124 1 0 1 2 0 0.57 0.63 4 0 0 4 4 4 11 11 11 11.43 15.09 84.78 0 1 2 Whitelist PRAD-CA 0.68 0.84 0 0 0.64 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 3 86087306 86611396 3 3 124 0 1 1 1 0 0.8 0 1 0 0 NA NA NA 15 15 15 11.43 1.81 98.05 0 2 NA Whitelist PRAD-CA 0.87 0 0 0 0.84 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 4 116070328 119769348 1 2 124 1 1 0 0 0 0.57 0.15 4 0 0 4 3 4 7 5 5 11.43 0.38 99.6 0 2 1 Whitelist PRAD-CA 0.68 0.35 0 0 0.64 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 5 61391468 82150238 6 6 124 1 2 1 2 0 0.88 0 11 0 0 11 11 11 45 45 45 11.43 26.97 73.02 0 1 2 Whitelist PRAD-CA 0.93 0 0 0 0.91 1 High confidence PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 6 64976047 119220772 3 3 124 2 1 0 0 0 0.3 0.85 4 0 0 4 4 4 9 9 9 11.43 30.94 68.89 0 1 2 Whitelist PRAD-CA 0.62 0.98 0 0 0.59 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 7 13265153 13279734 1 1 124 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 11.43 0.01 99.77 0 1 2 Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 8 3924137 30951283 1 1 124 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 11.43 18.47 81.53 0 1 2 Whitelist PRAD-CA 0.62 0.09 NA NA 0.59 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 9 117734586 117744999 1 1 124 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 11.43 0 99.3 0 2 NA Whitelist PRAD-CA 0.62 0.26 NA NA 0.59 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 10 60176709 60466800 1 2 124 2 0 0 0 0 0.11 0.39 4 0 0 4 4 4 5 5 5 11.43 0.05 99.78 0 1 2 Whitelist PRAD-CA 0.54 0.63 0 0 0.48 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 11 22406385 50747919 3 3 124 0 1 1 1 0 0.8 0.19 6 0 0 6 6 6 9 9 9 11.43 3.45 92.45 0 1 2 Whitelist PRAD-CA 0.87 0.41 0 0 0.84 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 12 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 13 57408758 57561484 2 2 124 0 0 1 1 0 0.57 1 3 0 0 NA NA NA NA NA NA 11.43 0 100 0 2 1 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 14 40125360 64446311 1 2 124 1 1 0 0 0 0.57 0.45 1 NA 0 NA NA NA NA NA NA 11.43 0 99.09 0 2 NA Whitelist PRAD-CA 0.68 0.69 NA 0 0.64 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 15 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 16 63407336 87039387 6 7 124 0 0 3 3 1 0.11 0 14 0 0 14 14 14 21 21 21 11.43 24.47 75.44 0 1 2 Whitelist PRAD-CA 0.54 0.01 0 0 0.48 1 High confidence PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA Canonical without polyploidization 13 0.05 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 17 985909 80158071 1 2 124 0 2 0 0 0 0.11 0.78 4 NA 0.04 4 4 4 5 5 5 11.43 2.63 97.34 0 2 3 Whitelist PRAD-CA 0.54 0.93 NA 0.04 0.48 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 18 5095498 27854149 4 4 124 2 0 1 1 0 0.57 0.58 1 0.02 0 NA NA NA NA NA NA 11.43 0 99.96 0 2 NA Whitelist PRAD-CA 0.68 0.8 0.02 0 0.64 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 19 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 20 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 21 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 22 NA NA 0 0 124 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0183 X 28811182 142287146 1 4 124 3 1 0 0 0 0.11 0.84 1 0 0 NA NA NA NA NA NA 11.43 100 0 0 1 NA Whitelist PRAD-CA 0.54 0.97 0 0 0.48 1 No PRAD-CA CPCG0183 PRAD 0.71 1.88 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO46795 CPCG0183 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 1 NA NA 0 0 77 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.11 NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 2 NA NA 0 0 77 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.2 NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 3 71108445 84933227 1 1 77 1 0 0 0 0 0.39 1 2 0.02 NA NA NA NA 4 3 3 38.27 26.01 73.95 0 1 2 Whitelist PRAD-CA 0.62 1 0.02 NA 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 4 110428753 113257836 2 2 77 0 0 1 1 0 0.57 0.65 4 0 0 4 4 4 5 5 5 38.27 1.1 98.68 0 1 2 Whitelist PRAD-CA 0.68 0.86 0 0 0.64 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 5 98180831 122220551 2 2 77 0 0 1 1 0 0.57 0.15 4 0 0 4 4 4 11 11 11 38.27 4.59 95.28 0 1 2 Whitelist PRAD-CA 0.68 0.35 0 0 0.64 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 6 80060834 127619502 1 1 77 1 0 0 0 0 0.39 0.63 2 0 0 NA NA NA NA NA NA 38.27 99.85 0 0 1 3 Whitelist PRAD-CA 0.62 0.84 0 0 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 7 28022973 144475086 8 10 77 3 2 2 1 2 0.8 0 19 0 0 19 7 9 20 8 10 38.27 97.2 0.11 0 3 4 Whitelist PRAD-CA 0.96 0 0 0 0.84 1 High confidence PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA With other complex events 18 0.12 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 8 94239300 121349444 2 4 77 0 2 0 0 2 0.11 0.02 3 0 0 NA NA NA 9 5 9 38.27 98.92 1.08 0 3 2 Whitelist PRAD-CA 5 0.68 0.07 0 0 0.48 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 9 13361684 108641330 1 2 77 0 0 1 1 0 0.57 0.23 5 0 0 5 3 5 5 3 5 38.27 98.64 0.68 0 3 1 Whitelist PRAD-CA 0.68 0.46 0 0 0.64 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 10 89375239 90404918 1 2 77 1 0 0 0 1 0.39 0.59 2 NA NA NA NA NA 5 3 3 38.27 33.95 65.87 0 0 1 Whitelist PRAD-CA 0.68 0.81 NA NA 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 11 68819144 71066145 1 1 77 0 1 0 0 0 0.39 0.27 2 NA NA NA NA NA 9 3 4 38.27 2.49 97.08 0 2 3 Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 12 37913046 38415805 2 4 77 2 0 0 0 2 0.11 0 4 0 0 4 4 4 7 7 7 38.27 9.44 86.82 0 1 2 Whitelist PRAD-CA 0.62 0.02 0 0 0.48 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 13 NA NA 0 0 77 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 14 36950636 37753448 1 1 77 0 1 0 0 0 0.39 0.1 3 0 NA NA NA NA 6 0 3 38.27 98.19 0.9 0 4 5 Whitelist PRAD-CA 0.62 0.26 0 NA 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 15 NA NA 0 0 77 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.08 0 NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 16 NA NA 0 0 77 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 17 464802 76281751 1 6 77 0 1 1 0 4 0.57 0.02 6 0.61 0.14 6 4 6 7 5 5 38.27 9.22 90.76 0 2 1 Whitelist PRAD-CA 4 0.54 0.07 0.61 0.14 0.64 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 18 NA NA 0 0 77 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 19 47766191 56924672 1 2 77 0 0 0 1 1 0.39 0.07 3 NA NA NA NA NA 5 5 5 38.27 4.05 95.78 0 2 1 Whitelist PRAD-CA 0.68 0.2 NA NA 0.59 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 20 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 21 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 22 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0184 X NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0184 PRAD 0.57 2.16 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO46796 CPCG0184 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 1 1595112 99615178 1 2 72 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 5 3 5 10.03 10.53 89.47 0 2 1 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 2 NA NA 0 0 72 0 0 0 0 0 NA 0.52 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 0.01 NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 3 24103673 133408906 1 1 72 1 0 0 0 0 0.39 0.49 7 NA NA 7 7 7 9 7 7 10.03 0.21 99.65 0 2 0 Whitelist PRAD-CA 0.62 0.73 NA NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 4 103260886 124380081 1 1 72 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 10.03 0.04 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.25 NA NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 5 59752130 59775684 1 1 72 0 1 0 0 0 0.39 1 2 0 NA NA NA NA 9 3 3 10.03 0.19 97.13 0 2 3 Whitelist PRAD-CA 0.62 1 0 NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 6 139252959 141663796 1 1 72 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 10.03 1.41 98.35 0 1 2 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 7 25859068 26331506 1 1 72 0 1 0 0 0 0.39 0.8 1 0 NA NA NA NA NA NA NA 10.03 0.06 97.03 0 2 NA Whitelist PRAD-CA 0.62 0.95 0 NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 8 10909190 122438592 5 8 72 1 2 1 1 3 0.9 0.01 10 0 0 10 5 6 12 5 8 10.03 26.51 73.49 0 1 0 Whitelist PRAD-CA 0.87 0.05 0 0 0.92 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 13 0.09 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 9 NA NA 0 0 72 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA 9 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 10 11812464 112681665 8 16 72 5 1 2 0 8 0.07 0 22 0 0 22 7 11 25 7 14 10.03 13.13 83.42 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.48 1 High confidence PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA With other complex events 24 0.17 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 11 111789669 114997477 5 14 72 3 1 1 0 9 0.28 0 7 0 0 7 3 7 14 6 7 10.03 2.12 97.46 0 1 2 Whitelist PRAD-CA 10 0.81 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA With other complex events 19 0.13 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 12 110151139 124914680 3 3 72 0 1 1 1 0 0.8 0.58 2 0 0 NA NA NA 5 3 5 10.03 4.69 91.57 0 1 2 Whitelist PRAD-CA 0.87 0.8 0 0 0.84 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 13 56370226 78061936 3 3 72 1 0 1 1 0 0.8 0.1 1 0 0 NA NA NA NA NA NA 10.03 0 85.85 1 2 NA Whitelist PRAD-CA 0.87 0.27 0 0 0.84 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 15 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 16 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 17 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 18 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 19 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 20 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 21 39946851 42873491 1 1 72 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 10.03 6.08 71.75 0 1 2 Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0185 X NA NA 0 0 72 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0185 PRAD 0.56 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51069 CPCG0185 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 1 93997930 167585215 1 2 92 0 0 0 1 1 0.39 0.33 3 NA NA NA NA NA NA NA NA 9.23 0.02 99.66 0 2 0 Whitelist PRAD-CA 0.68 0.58 NA NA 0.59 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 3 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 2 143322867 172284289 1 2 92 2 0 0 0 0 0.11 0.01 2 0 0 NA NA NA 5 3 5 9.23 11.92 87.97 0 1 2 Whitelist PRAD-CA 0.54 0.06 0 0 0.48 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 3 NA NA 0 0 92 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.2 NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 4 27306310 42266612 2 2 92 0 0 1 1 0 0.57 0.53 3 0 0 NA NA NA NA NA NA 9.23 0.01 99.98 0 2 0 Whitelist PRAD-CA 0.68 0.76 0 0 0.64 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 5 NA NA 0 0 92 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 6 8530760 12542096 6 11 92 2 3 0 1 5 0.34 0 1 0 0 NA NA NA 11 7 11 9.23 0.73 99.13 0 2 NA Whitelist PRAD-CA 11 0.87 0 0 0 0.59 0 Linked to low confidence PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA With other complex events 17 0.09 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 7 21685140 21791327 1 1 92 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 9.23 0.07 99.71 0 1 2 Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 8 48081082 48909008 4 4 92 2 0 1 1 0 0.57 0.03 4 0 0 4 4 4 6 6 6 9.23 30.65 65.93 0 1 2 Whitelist PRAD-CA 0.68 0.1 0 0 0.64 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 9 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 10 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 11 78278095 82964421 6 8 92 1 0 3 2 2 0.34 0 5 0 0 5 5 5 9 5 9 9.23 1.79 97.79 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 Low confidence PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA Canonical without polyploidization 14 0.08 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 12 109797379 119472996 2 2 92 0 1 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 9.23 0.15 96.11 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 13 37633018 50770077 1 2 92 2 0 0 0 0 0.11 0.77 4 NA 0 4 3 4 5 3 3 9.23 11.41 88.59 0 1 0 Whitelist PRAD-CA 0.54 0.93 NA 0 0.48 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 14 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 15 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 16 60414902 61443122 1 1 92 1 0 0 0 0 0.39 1 3 NA NA NA NA NA 5 5 5 9.23 1.02 98.97 0 2 1 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 17 17398073 21140051 1 2 92 1 0 1 0 0 0.57 1 4 NA 0 4 4 4 6 6 6 9.23 21.5 78.49 0 1 2 Whitelist PRAD-CA 0.68 1 NA 0 0.64 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 18 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 19 41392923 43599146 2 2 92 0 0 1 1 0 0.57 0.43 2 0 0 NA NA NA NA NA NA 9.23 2.69 97.14 0 1 2 Whitelist PRAD-CA 0.68 0.68 0 0 0.64 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 20 37273493 44306748 1 1 92 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.23 0 99.03 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 21 39877302 42873052 1 3 92 1 0 0 0 2 0.39 0.1 2 NA 0 NA NA NA 4 4 4 9.23 13.91 63.92 0 1 2 Whitelist PRAD-CA 0.62 0.27 NA 0 0.59 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 22 NA NA 0 0 92 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0189 X NA NA 0 0 92 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.59 NA NA NA 0 No PRAD-CA CPCG0189 PRAD 0.61 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577102_T_C,CN:1 2 PRAD-CA DO51070 CPCG0189 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 1 42771690 248643908 2 16 121 2 0 0 0 14 0.11 0 10 0 0 10 3 6 11 4 6 13.54 31.46 68.29 0 1 2 Whitelist PRAD-CA 8 0.68 0.01 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA With other complex events 18 0.07 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 2 18638690 75295837 1 11 121 2 0 2 1 6 0.53 0.74 8 0 0 8 8 8 17 9 13 13.54 0.26 99.63 0 1 2 Whitelist PRAD-CA 0.87 0.91 0 0 0.64 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 16 0.07 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 3 12670120 195283991 2 4 121 0 0 2 2 0 0.26 0.86 3 0 0 NA NA NA 5 3 5 13.54 0.05 99.92 0 2 0 Whitelist PRAD-CA 0.62 0.99 0 0 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 4 NA NA 0 0 121 0 0 0 0 0 NA 0.86 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.99 0 NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 5 39322914 171049788 2 6 121 1 0 0 1 4 0.57 0.85 1 0 0 NA NA NA NA NA NA 13.54 0 99.88 0 2 NA Whitelist PRAD-CA 0.62 0.99 0 0 0.64 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 6 NA NA 0 0 121 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA 8 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.5 0 NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 7 NA NA 0 0 121 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA 11 7 11 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 0 NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 8 4682515 119746552 9 17 121 4 1 0 4 8 0.13 0 9 0 0 9 9 9 12 12 12 13.54 20.48 79.52 0 2 1 Whitelist PRAD-CA 12 0.77 0 0 0 0.55 1 High confidence PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA Canonical without polyploidization 26 0.11 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 9 114742115 115419330 1 1 121 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA 5 3 3 13.54 0.5 99.36 0 1 2 Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 10 6994207 108361744 23 25 121 3 5 7 8 2 0.46 0 14 0 0 14 4 9 15 5 10 13.54 21.68 74.86 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 Low confidence PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA With other complex events 48 0.2 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 11 112147965 117932509 2 2 121 0 0 1 1 0 0.57 0.66 2 0 0 NA NA NA 11 7 11 13.54 5.49 94.08 0 1 2 Whitelist PRAD-CA 0.68 0.87 0 0 0.64 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 12 51747202 124872408 1 4 121 2 0 0 0 2 0.11 0.83 6 0 0 6 6 6 10 7 9 13.54 8.22 88.04 0 1 2 Whitelist PRAD-CA 8 0.68 0.97 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA Canonical without polyploidization 6 0.02 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 13 95972624 97590132 3 7 121 1 1 1 0 4 0.8 0 2 0 0 NA NA NA 5 3 5 13.54 1.87 83.97 0 1 2 Whitelist PRAD-CA 0.77 0.02 0 0 0.84 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 10 0.04 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 14 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 15 NA NA 0 0 121 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 16 NA NA 0 0 121 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.15 0 NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 17 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 18 55880453 55906034 1 1 121 1 0 0 0 0 0.39 0.78 1 NA NA NA NA NA 4 4 4 13.54 53.75 41.34 0 1 NA Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 19 42556692 46222404 1 1 121 1 0 0 0 0 0.39 0.74 1 NA NA NA NA NA NA NA NA 13.54 0.04 92.69 0 2 NA Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 20 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 21 35386705 42868798 1 2 121 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 8 5 5 13.54 15.82 61.99 0 1 2 Whitelist PRAD-CA 0.54 0.87 NA 0 0.48 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 22 45226948 45835233 1 1 121 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 13.54 100 0 0 1 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0191 X 45488604 69189439 1 2 121 0 0 0 1 1 0.39 0.29 1 NA NA NA NA NA NA NA NA 13.54 100 0 0 1 NA Whitelist PRAD-CA 0.68 0.54 NA NA 0.59 1 No PRAD-CA CPCG0191 PRAD 0.55 1.84 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51072 CPCG0191 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 1 9595464 11057349 1 1 116 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 6.89 0.59 99.41 0 1 2 Whitelist PRAD-CA 0.62 0.01 NA NA 0.59 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 2 71553010 204756130 15 15 116 5 2 4 4 0 0.74 0.03 5 0 0 5 5 5 5 5 5 6.89 0.38 99.51 0 2 1 Whitelist PRAD-CA 0.85 0.1 0 0 0.82 0 Low confidence PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA Canonical without polyploidization 30 0.13 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 3 26993658 173827504 65 65 116 18 15 17 15 0 0.94 0 16 0 0 16 3 5 19 5 5 6.89 12.54 87.32 3 2 4 Whitelist PRAD-CA 0.96 0 0 0 0.95 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 130 0.56 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 4 139272524 139334465 1 1 116 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 6.89 0.03 99.94 0 1 2 Whitelist PRAD-CA 0.62 0.1 NA NA 0.59 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 5 NA NA 0 0 116 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.05 NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 6 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 7 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 8 NA NA 0 0 116 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.12 NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 9 NA NA 0 0 116 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.59 NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 10 79788555 91903252 3 3 116 3 0 0 0 0 0.03 1 4 0 0 4 0 3 4 0 3 6.89 0.97 98.93 0 2 1 Whitelist PRAD-CA 0.41 1 0 0 0.33 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 11 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 12 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 13 35687013 113324397 7 7 116 1 2 2 2 0 0.93 0.12 3 0 0 NA NA NA NA NA NA 6.89 10.47 89.53 0 2 1 Whitelist PRAD-CA 0.96 0.31 0 0 0.95 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 14 0.06 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 14 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 16 NA NA 0 0 116 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 17 21187459 27182357 1 1 116 0 1 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 6.89 7.83 92.17 0 2 NA Whitelist PRAD-CA 0.62 0.79 NA NA 0.59 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 18 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 19 NA NA 0 0 116 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 20 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 21 39862015 42867116 3 5 116 1 1 0 1 2 0.8 0.01 1 0 0 NA NA NA NA NA NA 6.89 0 77.35 0 2 NA Whitelist PRAD-CA 0.93 0.06 0 0 0.84 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 22 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0196 X NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0196 PRAD 0.7 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51073 CPCG0196 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 1 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 2 134132971 242278740 1 2 109 2 0 0 0 0 0.11 0.04 2 NA 0 NA NA NA NA NA NA 11.84 22 77.9 0 1 2 Whitelist PRAD-CA 0.54 0.13 NA 0 0.48 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 3 162683867 169237872 13 13 109 3 3 4 3 0 0.97 0.06 11 0 0 11 11 11 13 13 13 11.84 3.2 96.75 0 2 1 Whitelist PRAD-CA 0.99 0.18 0 0 0.98 1 High confidence PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA Canonical without polyploidization 26 0.12 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 4 35567462 94888746 1 4 109 3 0 0 1 0 0.11 1 4 0 0 4 4 4 5 5 5 11.84 1.44 98.54 1 1 2 Whitelist PRAD-CA 0.54 1 0 0 0.48 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 5 30217746 163056821 14 16 109 3 3 3 5 2 0.84 0 16 0 0 16 16 16 19 17 17 11.84 0.73 99.13 0 1 2 Whitelist PRAD-CA 0.79 0 0 0 0.88 1 High confidence PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA Canonical without polyploidization 30 0.14 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 6 64700080 152466236 6 6 109 1 0 2 3 0 0.34 0.16 6 0 0 6 6 6 9 9 9 11.84 49.87 49.98 0 1 2 Whitelist PRAD-CA 0.62 0.36 0 0 0.59 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 12 0.06 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 7 7799682 14177776 7 7 109 3 0 3 1 0 0.28 0.39 8 0 0 8 8 8 9 9 9 11.84 0.74 99.03 0 1 2 Whitelist PRAD-CA 0.62 0.64 0 0 0.59 1 High confidence PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA Canonical without polyploidization 14 0.06 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 8 2204947 114953955 1 2 109 0 0 0 2 0 0.11 0.66 3 0 0 NA NA NA 4 3 3 11.84 20 79.99 0 2 1 Whitelist PRAD-CA 0.54 0.87 0 0 0.48 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 9 9347387 9483975 1 1 109 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA NA NA NA 11.84 0.1 99.2 0 1 2 Whitelist PRAD-CA 0.62 0.95 NA NA 0.59 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 10 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 11 NA NA 0 0 109 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 12 40811810 113578120 24 24 109 6 4 7 7 0 0.8 0 22 0 0 22 22 22 23 23 23 11.84 3.93 95.99 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.84 1 High confidence PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA Canonical without polyploidization 48 0.22 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 13 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 14 58898638 71429585 1 1 109 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 11.84 11.67 87.41 0 1 2 Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 15 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 16 3240399 84230912 1 5 109 0 1 1 0 3 0.57 0.22 5 0 0.01 5 4 5 7 5 5 11.84 20.42 79.47 0 1 2 Whitelist PRAD-CA 0.62 0.45 0 0.01 0.64 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 17 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 18 NA NA 0 0 109 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 19 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 20 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 21 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 22 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0199 X 126784597 152948223 10 10 109 3 3 2 2 0 0.94 0.07 1 0 0 NA NA NA NA NA NA 11.84 100 0 0 1 NA Whitelist PRAD-CA 0.96 0.21 0 0 0.96 1 No PRAD-CA CPCG0199 PRAD 0.28 1.88 Prost-AdenoCA NA 20 0.09 nonsynonymous_SNV,17_7578525_C_G,CN:2 2 PRAD-CA DO51074 CPCG0199 male alive C61 no treatment 74 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 1 189273295 197948284 7 10 350 3 1 2 1 3 0.67 1 7 0 0 7 7 7 18 9 16 14.58 10.99 86.04 0 2 1 Whitelist PRAD-CA 5 0.96 1 0 0 0.74 0 Linked to high confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 17 0.02 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0201 2 143840477 201125416 3 6 350 2 1 2 1 0 0.88 0.63 7 0 0 7 7 7 9 9 9 14.58 15.62 84.28 6 2 1 Whitelist PRAD-CA 0.93 0.84 0 0 0.91 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 12 0.02 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 3 143268561 161410524 5 5 350 2 1 1 1 0 0.9 0.6 3 0 0 NA NA NA 11 11 11 14.58 14.95 85.02 0 2 1 Whitelist PRAD-CA 0.93 0.81 0 0 0.92 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 10 0.01 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 4 114833795 189168661 22 25 350 6 8 5 3 3 0.5 0 17 0 0 17 17 17 40 19 35 14.58 14.39 83.24 1 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 Linked to high confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 47 0.07 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0201 5 19275862 166331721 36 39 350 8 5 11 12 3 0.34 0 46 0 0 46 26 29 52 28 28 14.58 26.41 73.31 2 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 0 High confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA With other complex events 75 0.11 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 6 64935112 158946645 11 22 350 2 4 3 2 11 0.8 0.02 24 0 0 24 18 24 25 18 18 14.58 39.33 60.49 0 1 2 Whitelist PRAD-CA 11_4 0.89 0.07 0 0 0.84 0 High confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 33 0.05 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 7 31600113 33178556 2 5 350 1 1 0 0 3 0.57 0.81 3 0 0 NA NA NA 9 7 7 14.58 0.14 97.13 0 2 3 Whitelist PRAD-CA 4 0.68 0.96 0 0 0.64 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 7 0.01 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 8 110465140 135423396 5 14 350 4 1 0 0 9 0.04 0.22 2 0 0 NA NA NA 5 5 5 14.58 5.79 94.1 0 1 2 Whitelist PRAD-CA 13 0.68 0.45 0 0 0.36 0 Linked to high confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA With other complex events 19 0.03 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 9 6256612 23184831 23 33 350 4 4 8 7 10 0.53 0 37 0 0 37 37 37 37 37 37 14.58 1.45 97.83 0 2 1 Whitelist PRAD-CA 5 0.62 0 0 0 0.64 0 High confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 56 0.08 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 10 56428302 59799775 5 5 350 1 0 2 2 0 0.53 0.16 1 0 0 NA NA NA NA NA NA 14.58 1.15 98.7 0 2 NA Whitelist PRAD-CA 0.68 0.36 0 0 0.64 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 10 0.01 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 11 36858222 50765923 1 9 350 0 0 1 3 5 0.11 0.9 4 0 0 4 4 4 5 5 5 14.58 1.63 97.95 0 1 2 Whitelist PRAD-CA 6 0.54 1 0 0 0.48 0 Linked to high confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 13 0.02 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 12 NA NA 0 0 350 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 0 NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 13 78597547 81366968 6 13 350 1 0 3 2 7 0.34 0 7 0 0 7 7 7 17 17 17 14.58 40.48 45.37 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 High confidence PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA Canonical without polyploidization 19 0.03 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 14 82127113 82211720 2 2 350 2 0 0 0 0 0.11 0.65 2 0 0 NA NA NA 5 5 5 14.58 1.36 82.73 0 1 2 Whitelist PRAD-CA 0.54 0.86 0 0 0.48 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 15 NA NA 0 0 350 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 16 NA NA 0 0 350 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 17 NA NA 0 0 350 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 18 NA NA 0 0 350 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 19 NA NA 0 0 350 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.07 NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 20 NA NA 0 0 350 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 21 20118177 20139383 1 1 350 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 14.58 0.04 70.17 0 1 2 Whitelist PRAD-CA 0.62 0.34 NA NA 0.59 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 22 NA NA 0 0 350 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.7 NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0201 X NA NA 0 0 350 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 0 No PRAD-CA CPCG0201 PRAD 0.78 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51075 CPCG0201 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 1 79600764 200272115 6 6 173 3 3 0 0 0 0.11 0.05 8 0 0 8 8 8 11 11 11 16.68 18.44 81.56 0 1 2 Whitelist PRAD-CA 0.54 0.15 0 0 0.48 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 2 104245862 156470188 4 4 173 0 1 1 2 0 0.57 0.49 5 0 0 5 5 5 27 27 27 16.68 8.28 91.6 0 2 1 Whitelist PRAD-CA 0.68 0.74 0 0 0.64 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 3 117580181 118859802 2 2 173 0 2 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 16.68 0.12 99.76 0 2 NA Whitelist PRAD-CA 0.54 1 0 0 0.48 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 4 29371490 167408932 1 13 173 7 1 4 1 0 0.05 0 12 0 0 12 6 12 13 7 7 16.68 0.99 98.81 0 2 1 Whitelist PRAD-CA 0.54 0.01 0 0 0.48 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 26 0.08 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 5 7327241 94584506 16 23 173 4 4 6 2 7 0.57 0 17 0 0 17 11 17 25 11 21 16.68 0.78 96.52 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA Canonical without polyploidization 39 0.11 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 6 65992911 120713938 2 6 173 0 1 3 2 0 0.34 0.63 12 0 0 12 12 12 17 17 17 16.68 26.75 73.02 0 1 2 Whitelist PRAD-CA 0.62 0.84 0 0 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 7 11040426 57333395 2 2 173 0 0 1 1 0 0.57 1 6 0 0 6 6 6 11 9 11 16.68 0.39 97.03 0 1 2 Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 8 53396165 56250211 4 4 173 1 1 1 1 0 1 0 2 0 0 NA NA NA 8 8 8 16.68 96.58 0 0 1 3 Whitelist PRAD-CA 1 0.02 0 0 1 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 9 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 10 45921420 108061816 1 2 173 2 0 0 0 0 0.11 0.1 3 0 0 NA NA NA 5 3 5 16.68 16.58 79.97 0 2 1 Whitelist PRAD-CA 0.54 0.26 0 0 0.48 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 11 45858528 97193270 6 9 173 1 1 2 2 3 0.88 0.1 12 0 0 12 4 7 17 5 11 16.68 60.25 36.28 0 2 3 Whitelist PRAD-CA 0.97 0.26 0 0 0.91 1 Low confidence PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA With other complex events 15 0.04 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 12 NA NA 0 0 173 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.03 NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 13 80293776 81873793 1 1 173 0 1 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 16.68 0 85.85 0 2 NA Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 14 39493314 45475335 3 3 173 1 0 1 1 0 0.8 0.27 7 0 0 7 7 7 10 7 7 16.68 2.94 81.15 0 2 1 Whitelist PRAD-CA 0.87 0.51 0 0 0.84 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 15 24756130 25253905 1 1 173 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 16.68 0.49 84.1 0 2 3 Whitelist PRAD-CA 0.62 0.26 NA NA 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 16 49190576 49211680 1 1 173 1 0 0 0 0 0.39 0.64 2 NA NA NA NA NA 7 5 7 16.68 0.92 94.56 0 1 2 Whitelist PRAD-CA 0.62 0.85 NA NA 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 17 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 18 70310623 71646711 1 1 173 0 0 0 1 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 16.68 1.43 98.54 0 2 NA Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 19 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 20 NA NA 0 0 173 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 21 23007527 24393086 2 2 173 1 1 0 0 0 0.57 0.47 1 0 0 NA NA NA NA NA NA 16.68 0 70.37 0 2 NA Whitelist PRAD-CA 0.68 0.72 0 0 0.64 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 22 NA NA 0 0 173 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0206 X 6828588 7155656 1 1 173 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 16.68 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.06 NA NA 0.59 1 No PRAD-CA CPCG0206 PRAD 0.3 1.94 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51078 CPCG0206 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 1 NA NA 0 0 90 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 2 42579314 147490745 1 6 90 2 0 2 0 2 0.26 0.34 1 0 0 NA NA NA NA NA NA 7.15 0 99.88 0 2 NA Whitelist PRAD-CA 0.62 0.59 0 0 0.59 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 10 0.06 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 3 63050271 74920109 1 1 90 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 7 5 5 7.15 6.03 93.83 0 1 2 Whitelist PRAD-CA 0.62 1 0 NA 0.59 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 4 180337210 184458914 4 4 90 3 1 0 0 0 0.11 0.2 4 0 0 4 4 4 5 5 5 7.15 0.61 99.38 0 1 2 Whitelist PRAD-CA 0.54 0.43 0 0 0.48 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 5 54711398 151747029 12 28 90 2 2 2 6 16 0.26 0 23 0 0 23 23 23 27 25 27 7.15 12.86 84.47 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA Canonical without polyploidization 40 0.22 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 6 80312139 91642236 2 8 90 0 1 1 0 6 0.57 0 7 0 0 7 3 3 14 10 10 7.15 1.96 97.9 0 1 2 Whitelist PRAD-CA 5 0.62 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA With other complex events 10 0.06 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 7 149306236 156254192 3 3 90 0 1 2 0 0 0.3 0.15 1 0 0 NA NA NA NA NA NA 7.15 0.48 96.94 0 2 NA Whitelist PRAD-CA 0.62 0.36 0 0 0.59 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 8 6075645 42724629 12 16 90 2 4 3 3 4 0.88 0 8 0 0 8 8 8 11 11 11 7.15 17.92 82.07 0 1 2 Whitelist PRAD-CA 0.95 0 0 0 0.91 1 High confidence PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA Canonical without polyploidization 28 0.16 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 9 NA NA 0 0 90 0 0 0 0 0 NA 0.41 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.65 0 NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 10 NA NA 0 0 90 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.32 NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 11 NA NA 0 0 90 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.32 NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 12 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 13 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 14 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 16 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 17 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 19 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 20 524691 21043858 1 2 90 0 0 1 0 1 0.39 0.45 1 NA NA NA NA NA NA NA NA 7.15 0 99.03 0 2 NA Whitelist PRAD-CA 0.68 0.69 NA NA 0.59 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 22 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0208 X NA NA 0 0 90 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 1 No PRAD-CA CPCG0208 PRAD 0.78 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51079 CPCG0208 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 1 212388907 228266840 2 5 74 1 0 0 1 3 0.57 0.01 9 0 0 9 9 9 13 13 13 8.09 1.25 98.75 0 2 1 Whitelist PRAD-CA 5 0.93 0.06 0 0 0.64 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 2 191297296 204765227 9 9 74 1 1 3 4 0 0.39 0 5 0 0 5 5 5 7 5 7 8.09 0.1 99.79 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 18 0.12 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 3 71932817 138374549 2 4 74 0 0 2 2 0 0.26 0.04 1 0 0 NA NA NA NA NA NA 8.09 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.13 0 0 0.59 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 4 NA NA 0 0 74 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.19 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 5 55537579 138602954 1 4 74 3 0 0 0 1 0.03 0 7 0 0 7 5 7 13 6 8 8.09 27.47 69.86 0 1 2 Whitelist PRAD-CA 0.54 0 0 0 0.33 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 6 2309308 111223580 1 2 74 1 0 0 1 0 0.57 0.21 5 0 0 5 3 5 5 3 3 8.09 0.02 99.84 0 2 0 Whitelist PRAD-CA 0.68 0.44 0 0 0.64 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 7 NA NA 0 0 74 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 8 52749497 53427461 1 1 74 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.09 29.44 67.14 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 9 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 10 NA NA 0 0 74 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 11 NA NA 0 0 74 0 0 0 0 0 NA 0.4 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.64 0 NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 12 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 13 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 14 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 15 29896461 40703979 1 5 74 0 0 1 1 3 0.57 0 3 0 0 NA NA NA 5 5 5 8.09 0.87 83.64 0 2 1 Whitelist PRAD-CA 0.68 0.01 0 0 0.64 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 16 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 17 NA NA 0 0 74 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.34 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 18 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 19 NA NA 0 0 74 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 20 NA NA 0 0 74 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 21 NA NA 0 0 74 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.46 NA NA NA 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 22 23029723 23090303 1 1 74 0 1 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 8.09 0 76.22 0 2 NA Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0210 X 138250737 138906671 1 1 74 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 8.09 99.58 0.42 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0210 PRAD 0.5 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51080 CPCG0210 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 1 7299619 205609221 1 5 106 1 0 0 1 3 0.57 1 5 0.06 0.11 5 3 5 7 5 7 9.57 0.03 99.97 0 2 0 Whitelist PRAD-CA 0.68 1 0.06 0.11 0.64 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 2 15850928 179041463 7 16 106 3 0 2 2 9 0.44 0 20 0 0 20 7 10 25 8 10 9.57 5.55 94.34 0 1 2 Whitelist PRAD-CA 3 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA With other complex events 23 0.11 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 3 37350014 175530481 1 12 106 1 1 1 0 9 0.8 0.02 6 0 0 6 4 6 7 5 5 9.57 1.52 98.45 0 2 1 Whitelist PRAD-CA 2 0.93 0.08 0 0 0.84 1 Linked to high confidence PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA Canonical without polyploidization 15 0.07 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 4 NA NA 0 0 106 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.38 0 NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 5 36564950 42945692 4 6 106 2 2 0 0 2 0.26 0 4 0 0 4 4 4 15 4 9 9.57 4.97 92.28 0 1 2 Whitelist PRAD-CA 0.62 0.02 0 0 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 10 0.05 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 6 NA NA 0 0 106 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.67 0 NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 7 146825267 147523898 1 2 106 2 0 0 0 0 0.11 0.13 1 NA 0 NA NA NA 6 4 4 9.57 0.28 99.5 0 2 NA Whitelist PRAD-CA 0.54 0.32 NA 0 0.48 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 8 12454985 98371148 1 6 106 1 0 0 2 3 0.3 0.07 6 0 0 6 6 6 10 8 8 9.57 31.06 65.52 0 1 2 Whitelist PRAD-CA 0.93 0.21 0 0 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 9 NA NA 0 0 106 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.42 0 NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 10 89625685 93882281 2 3 106 0 0 1 1 1 0.57 0 2 0 0 NA NA NA 6 6 6 9.57 5.33 94.5 0 1 2 Whitelist PRAD-CA 0.62 0.02 0 0 0.64 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 11 2194994 63709398 4 5 106 0 0 2 2 1 0.26 0 13 0 0 13 4 6 13 4 6 9.57 1.12 98.45 0 2 1 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 12 11857561 12732163 2 4 106 0 2 0 0 2 0.11 0.64 6 0 0 6 6 6 16 11 11 9.57 2.75 93.51 0 1 2 Whitelist PRAD-CA 0.68 0.85 0 0 0.48 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 13 42973493 52034529 1 1 106 1 0 0 0 0 0.39 0.03 2 0 NA NA NA NA 7 3 3 9.57 10.41 89.59 0 1 2 Whitelist PRAD-CA 0.62 0.11 0 NA 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 14 23310029 91217856 5 9 106 1 2 1 1 4 0.9 0 18 0 0 18 11 13 19 11 11 9.57 3.11 95.98 0 2 1 Whitelist PRAD-CA 0.85 0.01 0 0 0.92 1 High confidence PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA Canonical without polyploidization 14 0.07 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 15 NA NA 0 0 106 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.77 NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 16 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 17 42081126 44288055 1 1 106 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 9.57 2.72 97.28 0 1 2 Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 18 9244890 48547609 1 1 106 0 1 0 0 0 0.39 0.54 4 NA NA 4 4 4 5 5 5 9.57 50.07 49.9 0 1 2 Whitelist PRAD-CA 0.62 0.77 NA NA 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 19 NA NA 0 0 106 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 20 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 21 NA NA 0 0 106 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 22 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0211 X 41988301 42378447 1 1 106 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 9.57 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.15 NA NA 0.59 1 No PRAD-CA CPCG0211 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51081 CPCG0211 male alive C61 no treatment 75 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 1 22308125 216443323 1 6 155 0 1 0 2 3 0.3 0.55 13 0 0 13 7 13 13 7 7 10.73 0.16 99.81 0 2 4 Whitelist PRAD-CA 0.68 0.78 0 0 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 9 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 2 NA NA 0 0 155 0 0 0 0 0 NA 0.77 NA 0 NA NA NA NA 25 11 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 0 NA NA 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 3 66886956 74277742 1 7 155 2 0 1 0 4 0.3 1 10 0 0 10 8 10 31 8 8 10.73 3.51 96.36 0 1 2 Whitelist PRAD-CA 7 0.77 1 0 0 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 4 60264192 60339286 1 1 155 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 9 5 7 10.73 0.1 99.89 0 1 2 Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 5 NA NA 0 0 155 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA 23 12 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 0 NA NA 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 6 1591700 27034203 2 2 155 1 0 0 1 0 0.57 0.39 5 0 0.01 5 5 5 15 7 13 10.73 16.75 80.4 0 2 1 Whitelist PRAD-CA 0.68 0.64 0 0.01 0.64 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 7 36040035 50519427 1 6 155 2 0 0 0 4 0.11 0.21 5 0 0 5 5 5 19 5 17 10.73 1.77 95.54 0 2 1 Whitelist PRAD-CA 3 0.62 0.43 0 0 0.48 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 8 59302805 62218243 1 1 155 1 0 0 0 0 0.39 0.36 2 0.01 NA NA NA NA 10 6 8 10.73 29.47 70.53 0 1 2 Whitelist PRAD-CA 0.62 0.62 0.01 NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 9 92232326 114078594 3 5 155 1 0 0 2 2 0.3 0.21 5 0 0 5 5 5 11 5 7 10.73 1.25 98.09 0 2 1 Whitelist PRAD-CA 0.93 0.44 0 0 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 10 78295413 113385330 1 6 155 0 1 1 1 3 0.8 0.17 8 0 0 8 4 8 12 4 5 10.73 37.37 59.18 0 1 2 Whitelist PRAD-CA 0.62 0.39 0 0 0.84 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 9 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 11 NA NA 0 0 155 0 0 0 0 0 NA 0.25 NA 0 NA NA NA NA 9 7 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.5 0 NA NA 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 12 48583927 121655567 3 3 155 1 0 1 1 0 0.8 0.08 4 0 0 4 3 4 10 6 8 10.73 0.44 95.82 0 2 0 Whitelist PRAD-CA 0.87 0.24 0 0 0.84 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 13 43058121 45205227 1 1 155 0 0 0 1 0 0.39 0.18 1 NA NA NA NA NA 7 5 5 10.73 0.11 99.89 0 2 NA Whitelist PRAD-CA 0.62 0.4 NA NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 14 106716822 106727574 1 1 155 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 10.73 0.05 99.37 0 2 NA Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 15 56854527 57562751 1 1 155 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA 7 5 5 10.73 0.17 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 16 66944669 67073579 1 1 155 0 1 0 0 0 0.39 0.8 1 0 NA NA NA NA 7 5 5 10.73 0.12 99.78 0 2 NA Whitelist PRAD-CA 0.62 0.95 0 NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 17 6925782 42741053 1 5 155 4 0 0 0 1 0.01 0.08 9 0 0 9 7 9 11 7 7 10.73 11.61 88.38 0 1 0 Whitelist PRAD-CA 0.45 0.22 0 0 0.16 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 9 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 18 55845147 55914284 1 3 155 1 0 0 0 2 0.39 0.32 1 0 0 NA NA NA 5 3 3 10.73 0.11 99.17 0 2 NA Whitelist PRAD-CA 0.62 0.57 0 0 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 19 NA NA 0 0 155 0 0 0 0 0 NA 0.55 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 0.01 NA NA 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 20 49257095 49385503 1 1 155 0 0 1 0 0 0.39 1 1 NA NA NA NA NA 5 3 5 10.73 13.55 85.47 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 21 34026306 42867656 5 5 155 1 2 1 1 0 0.9 0 1 0 0 NA NA NA NA NA NA 10.73 0 77.46 0 2 NA Whitelist PRAD-CA 0.93 0.02 0 0 0.92 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 22 25811728 25955940 1 1 155 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA 4 3 3 10.73 43.37 56.63 0 2 NA Whitelist PRAD-CA 0.62 0.29 NA NA 0.59 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0213 X NA NA 0 0 155 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.03 NA NA NA 0 No PRAD-CA CPCG0213 PRAD 0.49 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51083 CPCG0213 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 2 NA NA 0 0 30 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 3 NA NA 0 0 30 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 4 NA NA 0 0 30 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.7 0 NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 5 101282308 102380066 1 1 30 0 1 0 0 0 0.39 0.43 1 NA NA NA NA NA 6 4 4 5.79 0.14 97.2 0 2 NA Whitelist PRAD-CA 0.62 0.68 NA NA 0.59 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 6 87868209 125261607 2 2 30 0 1 0 1 0 0.57 0.03 1 0 0 NA NA NA NA NA NA 5.79 0.12 99.74 0 2 NA Whitelist PRAD-CA 0.68 0.12 0 0 0.64 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 9 NA NA 0 0 30 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 11 46910294 47006304 1 1 30 0 1 0 0 0 0.39 0.65 1 NA NA NA NA NA 5 3 5 5.79 0.82 95.61 0 2 NA Whitelist PRAD-CA 0.62 0.86 NA NA 0.59 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 12 11281216 18305829 8 8 30 3 1 2 2 0 0.8 0 14 0 0 14 14 14 15 15 15 5.79 1.59 98.33 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.84 1 High confidence PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA Canonical without polyploidization 16 0.27 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 13 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 16 2127071 82608884 1 2 30 1 1 0 0 0 0.57 0.19 3 NA 0.04 NA NA NA NA NA NA 5.79 23.72 76.18 0 2 1 Whitelist PRAD-CA 0.68 0.41 NA 0.04 0.64 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 17 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 18 NA NA 0 0 30 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.78 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 19 NA NA 0 0 30 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0217 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0217 PRAD 0.6 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51084 CPCG0217 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 1 33333284 160926638 14 38 235 5 5 2 2 24 0.46 0 50 0 0 50 23 34 53 24 24 15.15 5.65 94.35 0 1 2 Whitelist PRAD-CA 10_12 0.73 0 0 0 0.64 1 High confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA With other complex events 52 0.11 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 2 152763284 155787088 6 6 235 1 0 2 3 0 0.34 0.81 1 0 0 NA NA NA 13 5 5 15.15 0.52 99.37 0 2 NA Whitelist PRAD-CA 0.62 0.96 0 0 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 3 70605253 72494755 6 8 235 1 3 1 1 2 0.57 0.61 5 0 0 5 5 5 9 9 9 15.15 1.44 98.43 0 2 1 Whitelist PRAD-CA 7 0.62 0.82 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA Canonical without polyploidization 14 0.03 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 4 96062804 178110569 2 4 235 1 0 2 1 0 0.57 0.79 1 0 0 NA NA NA NA NA NA 15.15 0 99.98 0 2 NA Whitelist PRAD-CA 0.68 0.95 0 0 0.64 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 5 54443227 122107536 24 24 235 8 6 6 4 0 0.72 0 9 0 0 9 9 9 17 9 17 15.15 3.9 93.42 0 2 1 Whitelist PRAD-CA 0.83 0 0 0 0.8 1 High confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA Canonical without polyploidization 48 0.1 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 6 76695374 82409551 3 3 235 0 2 1 0 0 0.3 0.58 1 0 0 NA NA NA 17 8 8 15.15 60.74 39.11 0 1 NA Whitelist PRAD-CA 0.62 0.8 0 0 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 7 29672657 149167548 1 8 235 2 0 2 0 4 0.26 0.31 9 0 0 9 6 9 11 8 8 15.15 1.08 96.27 0 1 2 Whitelist PRAD-CA 3 0.62 0.56 0 0 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 8 48754338 79437073 19 21 235 9 2 4 4 2 0.13 0 3 0 0 NA NA NA 4 4 4 15.15 26.73 73.27 0 2 1 Whitelist PRAD-CA 10 0.58 0 0 0 0.56 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 40 0.09 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 9 14210506 35125824 1 2 235 0 1 0 0 1 0.39 0.04 1 NA NA NA NA NA NA NA NA 15.15 0.02 99.31 0 2 NA Whitelist PRAD-CA 0.68 0.14 NA NA 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 10 85447653 117550662 3 9 235 2 0 1 0 6 0.3 0.06 7 0 0 7 5 7 16 5 7 15.15 23.24 73.3 0 1 2 Whitelist PRAD-CA 1_7 0.68 0.19 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA Canonical without polyploidization 12 0.03 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 11 18268597 118219903 1 4 235 2 0 0 1 1 0.3 0.16 11 0 0 11 4 6 11 4 6 15.15 4.17 95.4 0 1 2 Whitelist PRAD-CA 0.62 0.37 0 0 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 7 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 12 14965560 129555947 1 23 235 2 1 0 0 20 0.3 0 21 0 0 21 19 21 23 21 23 15.15 10.73 85.59 0 2 1 Whitelist PRAD-CA 1 1 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA Canonical without polyploidization 26 0.06 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 13 53484536 55549123 2 2 235 1 1 0 0 0 0.57 0.86 1 0 0 NA NA NA NA NA NA 15.15 0.02 99.98 0 2 NA Whitelist PRAD-CA 0.68 0.99 0 0 0.64 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 14 66761264 94566930 2 3 235 1 0 0 1 1 0.57 0.09 5 0 0 5 5 5 18 12 18 15.15 31.27 68.15 0 2 1 Whitelist PRAD-CA 0.87 0.25 0 0 0.64 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 15 23735932 47655159 4 4 235 2 1 0 1 0 0.57 0.43 8 0 0 8 8 8 9 9 9 15.15 17.06 82.81 0 1 2 Whitelist PRAD-CA 0.68 0.68 0 0 0.64 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 16 NA NA 0 0 235 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.46 NA NA NA 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 17 6688147 64164856 1 2 235 2 0 0 0 0 0.11 0.1 4 NA 0.01 4 4 4 5 5 5 15.15 13.01 86.95 0 1 2 Whitelist PRAD-CA 0.54 0.27 NA 0.01 0.48 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 18 54357319 68058750 6 8 235 2 2 1 1 2 0.88 0.15 9 0 0 9 9 9 9 9 9 15.15 1.85 98.11 0 2 1 Whitelist PRAD-CA 3 0.68 0.35 0 0 0.91 1 High confidence PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA Canonical without polyploidization 14 0.03 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 19 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 20 NA NA 0 0 235 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 21 39864979 42863836 1 1 235 1 0 0 0 0 0.39 0.54 2 NA NA NA NA NA 6 6 6 15.15 17.49 60.31 0 1 2 Whitelist PRAD-CA 0.62 0.77 NA NA 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 22 26242273 26547913 1 3 235 0 1 0 0 2 0.39 0.02 3 0 0 NA NA NA 7 7 7 15.15 9.03 90.97 0 1 2 Whitelist PRAD-CA 14 0.87 0.09 0 0 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0232 X 145333439 149955369 1 1 235 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 15.15 100 0 0 1 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 1 No PRAD-CA CPCG0232 PRAD 0.54 1.83 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51085 CPCG0232 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 1 188569591 190587732 2 6 348 0 0 1 1 4 0.57 0.01 4 0 0 4 4 4 7 5 7 16.7 0.23 99.77 0 1 2 Whitelist PRAD-CA 2 0.62 0.03 0 0 0.64 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 8 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 2 117469455 186106088 11 17 348 4 3 2 2 6 0.8 0.02 25 0 0 25 13 25 48 26 28 16.7 1.56 98.34 1 2 1 Whitelist PRAD-CA 1_11 0.99 0.08 0 0 0.84 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 28 0.04 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0233 3 7634513 179524544 39 41 348 8 10 11 10 2 0.92 0 92 0 0 92 8 17 97 8 17 16.7 52.77 44.06 44 3 2 Whitelist PRAD-CA 8 0.9 0 0 0 0.94 0 High confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA With other complex events 80 0.11 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 4 59417131 151727783 18 34 348 2 6 4 6 16 0.49 0 50 0 0 50 29 29 53 29 29 16.7 1.45 98.54 0 2 1 Whitelist PRAD-CA 11 0.62 0 0 0 0.64 0 High confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA With other complex events 52 0.07 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 5 3595335 5549810 2 4 348 1 1 1 1 0 1 0.32 5 0 0 5 5 5 30 11 13 16.7 20.08 77.26 0 2 1 Whitelist PRAD-CA 1 0.57 0 0 1 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 8 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 6 81224216 133441817 12 12 348 3 1 4 4 0 0.57 0.57 26 0 0 26 12 26 37 16 16 16.7 27.72 72.14 0 1 2 Whitelist PRAD-CA 0.68 0.8 0 0 0.64 0 High confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA With other complex events 24 0.03 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 7 32097339 149306170 1 8 348 4 1 1 0 2 0.11 0.72 22 0 0 22 7 19 25 7 7 16.7 8.48 91.3 0 1 2 Whitelist PRAD-CA 6 0.62 0.9 0 0 0.48 0 Linked to high confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA With other complex events 14 0.02 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 8 91134186 115039929 8 8 348 2 1 3 2 0 0.8 0.02 10 0 0 10 10 10 26 15 18 16.7 33.74 66.25 0 1 2 Whitelist PRAD-CA 0.87 0.08 0 0 0.84 0 High confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA Canonical without polyploidization 16 0.02 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 9 109942596 123438138 1 1 348 0 0 1 0 0 0.39 0 3 0.08 NA NA NA NA 9 7 7 16.7 1.65 97.68 0 1 2 Whitelist PRAD-CA 0.62 0.01 0.08 NA 0.59 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 10 59290168 98438172 9 11 348 0 1 4 4 2 0.13 0.8 11 0 0 11 11 11 19 11 13 16.7 0.29 99.53 0 2 1 Whitelist PRAD-CA 8 0.68 0.95 0 0 0.55 0 Linked to high confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA Canonical without polyploidization 20 0.03 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0233 11 31191605 104665239 2 18 348 1 0 1 0 16 0.57 0 25 0 0 25 8 11 29 11 14 16.7 19.15 77.15 0 1 2 Whitelist PRAD-CA 4 0.62 0 0 0 0.64 0 Linked to high confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA With other complex events 20 0.03 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 12 NA NA 0 0 348 0 0 0 0 0 NA 0.31 NA 0 NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.56 0 NA NA 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 13 31412584 113056429 3 6 348 4 1 0 1 0 0.11 0.55 15 0 0 15 15 15 15 15 15 16.7 21.11 78.89 0 2 1 Whitelist PRAD-CA 0.54 0.78 0 0 0.48 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 12 0.02 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 14 NA NA 0 0 348 0 0 0 0 0 NA 0.07 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.2 0 NA NA 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 15 NA NA 0 0 348 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 16 34358344 63315787 1 1 348 0 0 0 1 0 0.39 0 3 NA NA NA NA NA 5 5 5 16.7 18.85 81.05 0 2 1 Whitelist PRAD-CA 0.62 0.01 NA NA 0.59 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 17 NA NA 0 0 348 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 18 14491187 39625890 1 2 348 1 0 1 0 0 0.57 0.18 5 0 0 5 5 5 5 5 5 16.7 6.85 93.12 0 2 1 Whitelist PRAD-CA 0.68 0.4 0 0 0.64 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 19 12507614 57554195 1 2 348 1 0 0 1 0 0.57 0.17 1 0 0 NA NA NA NA NA NA 16.7 0 99.83 0 2 NA Whitelist PRAD-CA 0.68 0.39 0 0 0.64 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 20 1592201 46987839 1 3 348 0 1 1 1 0 0.8 0.26 1 0 0 NA NA NA NA NA NA 16.7 0 99.01 0 2 NA Whitelist PRAD-CA 0.87 0.51 0 0 0.84 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 21 18298400 22568498 9 13 348 1 3 3 2 4 0.75 0 11 0 0 11 11 11 11 11 11 16.7 2.4 75.16 0 2 1 Whitelist PRAD-CA 0.9 0 0 0 0.83 0 High confidence PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA Canonical without polyploidization 22 0.03 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 22 NA NA 0 0 348 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.43 NA NA NA 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0233 X 6260083 146090136 1 2 348 2 0 0 0 0 0.11 0 4 0 0 4 4 4 7 7 7 16.7 100 0 0 0 1 Whitelist PRAD-CA 0.54 0.01 0 0 0.48 0 No PRAD-CA CPCG0233 PRAD 0.59 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51086 CPCG0233 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 1 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 2 NA NA 0 0 21 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.26 0 NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 3 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 4 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 7 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 8 NA NA 0 0 21 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.54 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 9 NA NA 0 0 21 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.79 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 10 61310047 94695839 6 6 21 0 1 2 3 0 0.34 0 5 0 0 5 3 5 7 3 4 7.59 3.37 93.17 2 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 12 0.29 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 12 NA NA 0 0 21 0 0 0 0 0 NA 1 NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 16 NA NA 0 0 21 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.68 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 17 NA NA 0 0 21 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 19 24554534 24569986 1 1 21 0 0 0 1 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 7.59 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.04 0 NA 0.59 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 20 54904992 55043884 1 1 21 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 4 4 7.59 40.78 52.19 0 1 2 Whitelist PRAD-CA 0.62 0.62 NA NA 0.59 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 2 0.05 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 21 NA NA 0 0 21 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.46 NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0234 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0234 PRAD 0.97 1.9 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577568_A_C,CN:2 2 PRAD-CA DO51087 CPCG0234 male alive C61 no treatment 70 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 1 170266116 192996844 11 11 237 1 4 3 3 0 0.63 0.63 14 0 0 14 14 14 17 15 17 15.4 6.67 93.33 0 1 2 Whitelist PRAD-CA 0.74 0.84 0 0 0.71 1 High confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA Canonical without polyploidization 22 0.05 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 2 79571522 130185536 3 3 237 1 0 1 1 0 0.8 0.03 3 0 0 NA NA NA 16 7 9 15.4 0.56 99.33 0 2 1 Whitelist PRAD-CA 0.87 0.12 0 0 0.84 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 3 97198495 100818027 2 2 237 1 1 0 0 0 0.57 0.01 4 0 0 4 4 4 13 7 9 15.4 0.76 96.21 0 2 3 Whitelist PRAD-CA 0.68 0.05 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 4 12833922 68421773 15 16 237 3 3 4 5 1 0.87 0.01 19 0 0 19 7 11 26 13 15 15.4 3.27 96.64 0 2 1 Whitelist PRAD-CA 0.95 0.06 0 0 0.9 1 High confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA With other complex events 31 0.07 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 5 97010270 106309341 7 7 237 1 2 2 2 0 0.93 0 7 0 0 7 7 7 31 15 20 15.4 11.13 88.73 0 1 0 Whitelist PRAD-CA 0.96 0 0 0 0.95 1 High confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA Canonical without polyploidization 14 0.03 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 6 69773178 123627333 1 2 237 2 0 0 0 0 0.11 0 3 0.07 0 NA NA NA 5 3 5 15.4 30 69.86 0 2 1 Whitelist PRAD-CA 0.54 0 0.07 0 0.48 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 7 120753654 155502506 2 2 237 1 0 1 0 0 0.57 0.01 3 0 0 NA NA NA 4 4 4 15.4 0.37 99.4 0 2 3 Whitelist PRAD-CA 0.68 0.04 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 8 NA NA 0 0 237 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA 21 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.33 0 NA NA 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 9 113664978 116134237 1 1 237 0 1 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 15.4 1.85 97.98 0 2 3 Whitelist PRAD-CA 0.62 0.25 NA NA 0.59 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 10 46962433 85287848 28 53 237 9 5 7 7 25 0.77 0 36 0 0 36 21 21 38 21 23 15.4 2.8 93.75 0 2 1 Whitelist PRAD-CA 11_5 0.91 0 0 0 0.84 1 High confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA With other complex events 81 0.17 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 11 39558829 123463708 3 7 237 0 0 1 2 4 0.3 0.04 5 0 0 5 5 5 5 5 5 15.4 0.88 98.7 0 2 0 Whitelist PRAD-CA 10 0.62 0.15 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA Canonical without polyploidization 10 0.02 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 12 4329073 12671939 2 6 237 0 0 1 1 4 0.57 0.04 6 0 0 6 6 6 15 9 15 15.4 4.76 91.5 0 1 2 Whitelist PRAD-CA 0.62 0.15 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 13 NA NA 0 0 237 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.08 NA NA NA 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 14 91529544 106727573 1 3 237 1 1 0 0 1 0.57 0.46 1 0 0 NA NA NA NA NA NA 15.4 0 81.63 0 2 NA Whitelist PRAD-CA 0.62 0.7 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 15 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 16 25066174 72911219 1 2 237 2 0 0 0 0 0.11 0.69 3 0 0 NA NA NA 5 5 5 15.4 1.56 98.34 0 2 1 Whitelist PRAD-CA 0.54 0.89 0 0 0.48 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 17 NA NA 0 0 237 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 18 30000953 33089517 1 1 237 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 15.4 0 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.09 NA NA 0.59 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 19 14507538 44974705 1 2 237 0 0 1 1 0 0.57 0.48 2 0 0 NA NA NA NA NA NA 15.4 0 92.72 0 2 NA Whitelist PRAD-CA 0.68 0.72 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 20 30850339 33795463 15 15 237 7 4 2 2 0 0.22 0 10 0 0 10 5 5 11 5 5 15.4 99.04 0 0 3 5 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 Low confidence PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA With other complex events 30 0.06 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 21 39885392 42871236 1 1 237 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 15.4 7.54 70.29 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 22 21984539 32117003 1 7 237 1 1 0 0 5 0.57 0 6 0 0 6 3 6 6 3 3 15.4 26.5 49.72 0 2 1 Whitelist PRAD-CA 12 0.77 0.01 0 0 0.64 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 9 0.02 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0236 X 3619831 3632657 1 1 237 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 15.4 96.84 0 0 1 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 1 No PRAD-CA CPCG0236 PRAD 0.48 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51088 CPCG0236 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 1 25248495 156885998 18 19 132 5 4 5 4 1 0.97 0 17 0 0 17 14 17 17 14 14 8.91 4.47 95.53 0 2 3 Whitelist PRAD-CA 0.93 0 0 0 0.98 1 High confidence PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA Canonical without polyploidization 37 0.14 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 2 98328921 114809486 1 6 132 3 0 0 0 3 0.03 0.75 4 0 0 4 4 4 9 5 9 8.91 0.78 99.12 0 1 2 Whitelist PRAD-CA 0.68 0.92 0 0 0.33 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 9 0.03 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 3 9880074 10398704 1 1 132 1 0 0 0 0 0.39 0.17 1 0.01 NA NA NA NA 8 3 6 8.91 7.21 92.75 0 2 NA Whitelist PRAD-CA 0.62 0.39 0.01 NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 4 69213322 134381042 4 8 132 0 0 2 2 4 0.26 0.6 3 0 0 NA NA NA 5 5 5 8.91 0.58 99.4 0 2 1 Whitelist PRAD-CA 1 0.82 0 0 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 5 72074310 72348217 1 1 132 1 0 0 0 0 0.39 0.86 2 0 NA NA NA NA 5 3 5 8.91 0.26 97.06 0 1 2 Whitelist PRAD-CA 0.62 0.99 0 NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 6 NA NA 0 0 132 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.1 NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 7 141645078 142669690 1 1 132 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA 5 3 5 8.91 0.3 96.93 0 2 NA Whitelist PRAD-CA 0.62 0.16 NA NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 8 29090034 53295682 8 11 132 0 3 2 3 3 0.39 0.03 3 0 0 NA NA NA 7 5 7 8.91 5.73 94.26 0 2 1 Whitelist PRAD-CA 0.74 0.1 0 0 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 19 0.07 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 9 9706997 9736774 1 1 132 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 8.91 0 99.3 0 2 NA Whitelist PRAD-CA 0.62 0.2 NA NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 10 89251165 90478856 3 3 132 3 0 0 0 0 0.03 1 3 0 0 NA NA NA 7 4 4 8.91 20.68 79.15 0 1 0 Whitelist PRAD-CA 0.41 1 0 0 0.33 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 11 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 12 3217408 12030251 14 19 132 3 3 4 4 5 0.96 0 3 0 0 NA NA NA 7 3 7 8.91 0.8 95.45 0 2 1 Whitelist PRAD-CA 0.93 0 0 0 0.98 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 33 0.12 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 13 33264435 83241801 17 19 132 3 5 5 4 2 0.89 0 14 0 0 14 14 14 15 15 15 8.91 41.71 58.29 0 1 2 Whitelist PRAD-CA 1 0 0 0 0.92 1 High confidence PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA Canonical without polyploidization 36 0.14 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 14 44665840 47314160 7 7 132 2 2 2 1 0 0.93 0.01 1 0 0 NA NA NA NA NA NA 8.91 0 99.09 1 2 NA Whitelist PRAD-CA 0.96 0.04 0 0 0.95 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 14 0.05 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 15 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 16 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 17 NA NA 0 0 132 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.52 NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 18 46625421 46637131 1 1 132 1 0 0 0 0 0.39 0.17 1 0 NA NA NA NA NA NA NA 8.91 0.05 99.91 0 2 NA Whitelist PRAD-CA 0.62 0.39 0 NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 19 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 20 NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 21 39868086 42872559 1 1 132 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 8.91 13.79 63.9 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 22 29094052 47186954 1 2 132 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 5 5 5 8.91 3.31 96.69 0 1 2 Whitelist PRAD-CA 0.54 0.01 0 0 0.48 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0238 X NA NA 0 0 132 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0238 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51089 CPCG0238 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 1 NA NA 0 0 206 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 2 9693687 239470346 21 45 206 6 3 7 5 24 0.64 0 25 0 0 25 23 25 27 25 27 10.42 2.8 97.08 0 2 1 Whitelist PRAD-CA 3 1 0 0 0 0.72 1 High confidence PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA Canonical without polyploidization 66 0.16 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 3 53132905 194929596 24 74 206 4 6 5 9 50 0.51 0 29 0 0 29 15 21 35 15 23 10.42 42.57 57.33 0 2 1 Whitelist PRAD-CA 18_2 0.87 0 0 0 0.64 1 High confidence PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA With other complex events 98 0.24 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 4 NA NA 0 0 206 0 0 0 0 0 NA 0.01 NA 0.02 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.05 0.02 NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 5 15629760 141575224 8 8 206 1 3 2 2 0 0.8 0.89 11 0 0 11 3 7 11 3 7 10.42 0.44 99.41 0 2 1 Whitelist PRAD-CA 0.87 1 0 0 0.84 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 16 0.04 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 6 3122556 64926821 1 15 206 0 1 0 1 13 0.57 0.11 7 0 0 7 3 5 7 3 5 10.42 0.04 99.81 0 2 0 Whitelist PRAD-CA 2 0.54 0.28 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA With other complex events 17 0.04 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 7 107179126 129526076 1 1 206 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 9 5 7 10.42 16.34 80.82 0 1 2 Whitelist PRAD-CA 0.62 0.11 NA NA 0.59 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 8 49140063 49700912 1 1 206 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 10.42 20.57 76.01 0 1 2 Whitelist PRAD-CA 0.62 0.05 NA NA 0.59 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 9 15212996 15459026 2 2 206 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 10 3 5 10.42 0.35 98.95 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 10 45653275 93017647 1 2 206 1 0 0 1 0 0.57 0.03 4 0 0 4 0 3 6 3 5 10.42 4.33 95.5 0 2 0 Whitelist PRAD-CA 0.68 0.11 0 0 0.64 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 11 NA NA 0 0 206 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA 11 5 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 0 NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 12 112349084 112788519 1 1 206 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 7 5 7 10.42 0.52 95.74 0 1 2 Whitelist PRAD-CA 0.62 0.57 0 NA 0.59 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 13 63794744 71333917 7 7 206 2 1 2 2 0 0.93 0.7 8 0 0 8 8 8 9 9 9 10.42 3.29 96.71 0 1 2 Whitelist PRAD-CA 0.96 0.9 0 0 0.95 1 High confidence PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA Canonical without polyploidization 14 0.03 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 14 106518261 106727801 1 2 206 1 1 0 0 0 0.57 0.07 1 NA 0 NA NA NA NA NA NA 10.42 0.03 99.39 0 2 NA Whitelist PRAD-CA 0.68 0.21 NA 0 0.64 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 15 27643526 29818912 1 1 206 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 10.42 2.13 97.87 0 1 2 Whitelist PRAD-CA 0.62 0 0 NA 0.59 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 16 NA NA 0 0 206 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 17 NA NA 0 0 206 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 18 6527402 73201776 3 47 206 1 1 0 1 44 0.8 0 18 0 0 18 5 7 20 5 7 10.42 7.33 92.64 0 2 1 Whitelist PRAD-CA 3 0.94 0 0 0 0.84 1 Linked to high confidence PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA With other complex events 50 0.12 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 19 19354343 44974692 1 2 206 1 0 0 1 0 0.57 0.8 3 0 0 NA NA NA NA NA NA 10.42 0.06 92.66 0 2 1 Whitelist PRAD-CA 0.68 0.95 0 0 0.64 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 20 NA NA 0 0 206 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 21 39872765 42865400 1 3 206 1 0 0 0 2 0.39 0.11 3 0 0 NA NA NA NA NA NA 10.42 0.03 77.45 0 2 1 Whitelist PRAD-CA 0.87 0.29 0 0 0.59 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 22 NA NA 0 0 206 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0241 X NA NA 0 0 206 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 1 No PRAD-CA CPCG0241 PRAD 0.42 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51090 CPCG0241 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 1 207693763 207865988 2 2 217 1 1 0 0 0 0.57 0.01 1 0 0 NA NA NA 5 3 3 10.65 0.25 99.75 0 2 NA Whitelist PRAD-CA 0.68 0.04 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 2 36479801 177529191 4 6 217 1 2 0 1 2 0.57 0.11 12 0 0 12 4 7 14 4 7 10.65 0.43 99.46 0 2 0 Whitelist PRAD-CA 0.93 0.28 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 10 0.02 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 3 11900921 116657523 1 5 217 1 2 0 1 1 0.57 0.35 5 0 0 5 3 5 7 3 5 10.65 0.9 98.96 0 2 1 Whitelist PRAD-CA 0.62 0.6 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 9 0.02 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 4 NA NA 0 0 217 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.14 0 NA NA 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 5 58034191 59780373 1 2 217 1 1 0 0 0 0.57 0.26 3 0 0 NA NA NA 7 3 7 10.65 0.13 99.74 0 2 1 Whitelist PRAD-CA 0.68 0.5 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 6 38413427 39862406 2 2 217 0 0 1 1 0 0.57 0.67 3 0 0 NA NA NA 9 7 9 10.65 0.89 98.88 0 2 1 Whitelist PRAD-CA 0.68 0.87 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 7 29672724 29785499 1 1 217 1 0 0 0 0 0.39 0.76 1 0 NA NA NA NA 7 3 5 10.65 0.18 96.96 0 2 NA Whitelist PRAD-CA 0.62 0.93 0 NA 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 8 8188079 96079992 23 44 217 7 8 3 5 21 0.46 0 66 0 0 66 11 26 71 11 27 10.65 62.79 33.79 0 1 2 Whitelist PRAD-CA 19 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA With other complex events 67 0.15 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 9 82867617 108956321 15 17 217 3 2 6 4 2 0.51 0 23 0 0 23 4 4 43 4 8 10.65 38.99 57.93 0 1 7 Whitelist PRAD-CA 8 0.87 0 0 0 0.64 1 Low confidence PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA With other complex events 32 0.07 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 10 89552946 90311773 2 2 217 2 0 0 0 0 0.11 0.63 3 0 0 NA NA NA 6 3 4 10.65 0.57 99.26 0 0 1 Whitelist PRAD-CA 0.54 0.84 0 0 0.48 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 11 111584665 111598287 1 1 217 1 0 0 0 0 0.39 0.26 1 0 NA NA NA NA 6 4 4 10.65 0.38 95.44 0 2 NA Whitelist PRAD-CA 0.62 0.5 0 NA 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 12 10581662 32322851 1 3 217 3 0 0 0 0 0.03 0.26 1 0 0 NA NA NA 5 3 5 10.65 0.14 96.12 0 2 NA Whitelist PRAD-CA 0.41 0.5 0 0 0.33 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 13 95045793 95482874 1 1 217 0 1 0 0 0 0.39 0.13 1 0 NA NA NA NA NA NA NA 10.65 0.03 85.82 0 2 NA Whitelist PRAD-CA 0.62 0.32 0 NA 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 14 34012627 74042408 1 2 217 1 1 0 0 0 0.57 0.85 3 0 0 NA NA NA NA NA NA 10.65 0.12 81.17 0 2 0 Whitelist PRAD-CA 0.68 0.98 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 15 NA NA 0 0 217 0 0 0 0 0 NA 0.54 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.77 0 NA NA 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 16 25066234 25137508 1 1 217 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA 4 3 4 10.65 18.46 81.45 0 2 NA Whitelist PRAD-CA 0.62 0.64 NA NA 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 17 NA NA 0 0 217 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.12 NA NA NA 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 18 8624410 44240331 8 10 217 4 2 1 1 2 0.39 0 1 0 0 NA NA NA NA NA NA 10.65 0 99.96 0 2 NA Whitelist PRAD-CA 0.68 0.01 0 0 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 18 0.04 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 19 14507324 55917569 1 6 217 1 0 1 0 4 0.57 0 6 0 0 6 5 6 6 5 5 10.65 7.85 84.35 0 2 0 Whitelist PRAD-CA 0.93 0.02 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA Canonical without polyploidization 8 0.02 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 20 NA NA 0 0 217 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 21 39896465 42867244 1 1 217 1 0 0 0 0 0.39 0.34 2 0 NA NA NA NA 4 3 4 10.65 6.17 64.19 0 1 2 Whitelist PRAD-CA 0.62 0.6 0 NA 0.59 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 22 NA NA 0 0 217 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0242 X 54624359 57026892 2 2 217 0 0 1 1 0 0.57 0.44 2 0 0 NA NA NA NA NA NA 10.65 100 0 0 0 1 Whitelist PRAD-CA 0.68 0.69 0 0 0.64 1 No PRAD-CA CPCG0242 PRAD 0.65 1.95 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51091 CPCG0242 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 2 206170172 207229764 1 1 25 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 5.11 0.01 99.88 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 3 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 5 102652925 130586947 2 2 25 0 0 1 1 0 0.57 0.2 1 0 0 NA NA NA NA NA NA 5.11 0 99.99 0 2 NA Whitelist PRAD-CA 0.68 0.43 0 0 0.64 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 6 76566573 128956296 1 1 25 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.11 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 8 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 12 8702882 45773773 18 18 25 6 2 4 6 0 0.49 0 13 0 0 13 11 13 13 11 13 5.11 0.69 95.57 14 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA Canonical without polyploidization 36 0.72 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 17 41475913 44358112 1 1 25 1 0 0 0 0 0.39 0.5 2 NA NA NA NA NA NA NA NA 5.11 3.48 96.52 0 1 2 Whitelist PRAD-CA 0.62 0.74 NA NA 0.59 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0246 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0246 PRAD 0.82 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51092 CPCG0246 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 1 14525889 15252357 1 1 110 1 0 0 0 0 0.39 0.86 2 0 NA NA NA NA 4 4 4 9.39 10.18 89.8 0 1 2 Whitelist PRAD-CA 17 0.62 0.99 0 NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 2 227023973 227061387 1 1 110 0 1 0 0 0 0.39 0.73 1 0 NA NA NA NA 11 11 11 9.39 0.32 99.58 0 2 NA Whitelist PRAD-CA 0.62 0.91 0 NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 3 69541098 115353328 1 3 110 1 0 1 0 1 0.57 0.71 8 0 0 8 4 8 19 5 5 9.39 9.75 87.2 0 2 1 Whitelist PRAD-CA 0.87 0.9 0 0 0.64 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 4 52821935 110337127 1 2 110 0 0 0 1 1 0.39 1 1 0 0 NA NA NA 6 4 4 9.39 0.07 99.83 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 5 54987957 56531298 1 8 110 1 0 0 1 6 0.57 0.23 1 0 0 NA NA NA 7 3 5 9.39 0.23 97.1 0 2 NA Whitelist PRAD-CA 0.87 0.47 0 0 0.64 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 10 0.05 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 6 NA NA 0 0 110 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 0 NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 7 NA NA 0 0 110 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.17 0 NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 8 38124678 42971179 6 6 110 1 1 2 2 0 0.88 0 6 0 0 6 3 6 16 10 10 9.39 21.33 75.25 2 2 1 Whitelist PRAD-CA 0.93 0 0 0 0.91 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 9 NA NA 0 0 110 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.95 NA NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 10 72519646 95990929 1 3 110 1 0 0 0 2 0.39 0.04 4 0 0 4 3 4 5 3 3 9.39 17.32 82.51 0 1 0 Whitelist PRAD-CA 0.62 0.13 0 0 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 11 NA NA 0 0 110 0 0 0 0 0 NA 0.65 NA 0 NA NA NA NA 11 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.86 0 NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 12 23143579 30936876 3 7 110 0 0 1 2 4 0.3 0.18 9 0 0 9 9 9 11 11 11 9.39 14.43 85.49 0 2 1 Whitelist PRAD-CA 0.77 0.39 0 0 0.59 1 High confidence PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA Canonical without polyploidization 10 0.05 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 13 68860503 83891899 1 2 110 1 1 0 0 0 0.57 0.59 3 NA 0 NA NA NA 5 3 3 9.39 0.29 85.55 0 2 3 Whitelist PRAD-CA 0.68 0.81 NA 0 0.64 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 14 38160357 38976089 1 1 110 0 1 0 0 0 0.39 0.27 1 NA NA NA NA NA 4 3 3 9.39 3.56 80.53 0 3 NA Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 15 NA NA 0 0 110 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 16 52969776 81697948 1 2 110 0 2 0 0 0 0.11 0.22 3 0 0 NA NA NA 5 3 3 9.39 1.42 98.46 0 2 3 Whitelist PRAD-CA 0.54 0.46 0 0 0.48 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 17 2736441 58020534 1 10 110 3 0 0 0 7 0.03 0 5 0 0 5 5 5 5 5 5 9.39 2.07 97.91 0 2 1 Whitelist PRAD-CA 0.62 0.01 0 0 0.33 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 13 0.06 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 18 14268349 14323562 1 1 110 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 9.39 8.82 91.15 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 19 42468592 42775714 1 1 110 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 9.39 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 20 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 21 39864632 42870158 1 8 110 1 0 0 0 7 0.39 0 1 0 0 NA NA NA 5 5 5 9.39 2.39 75.05 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 22 33457085 46484828 1 3 110 0 0 1 0 2 0.39 0.01 1 0 0 NA NA NA NA NA NA 9.39 0 75.06 0 2 NA Whitelist PRAD-CA 0.87 0.05 0 0 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0248 X 15711156 16231955 1 1 110 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 9.39 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.4 NA NA 0.59 1 No PRAD-CA CPCG0248 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51093 CPCG0248 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 1 82459938 83499841 2 2 458 1 0 0 1 0 0.57 0 4 0 0 4 0 4 8 3 5 11.02 0.64 99.36 0 1 0 Whitelist PRAD-CA 0.68 0.01 0 0 0.64 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 4 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 2 52137503 222453077 49 50 458 18 5 14 12 1 0.06 0 28 0 0 28 15 21 31 15 21 11.02 11.97 87.94 0 2 1 Whitelist PRAD-CA 0.54 0 0 0 0.48 0 High confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 99 0.11 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 3 57532996 115435241 1 7 458 0 2 1 0 4 0.3 0 2 0 0 NA NA NA 6 3 5 11.02 3.37 96.5 0 1 2 Whitelist PRAD-CA 13_4 0.77 0.01 0 0 0.59 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 10 0.01 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 4 131017625 140613501 5 5 458 1 1 1 2 0 0.9 0.19 10 0 0 10 5 10 27 14 14 11.02 15.29 84.49 0 1 2 Whitelist PRAD-CA 0.93 0.41 0 0 0.92 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 10 0.01 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 5 24023055 168167900 99 103 458 22 24 29 24 4 0.78 0 78 0 0 78 20 21 78 20 21 11.02 24.82 72.54 1 1 2 Whitelist PRAD-CA 8 0.74 0 0 0 0.84 0 High confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 202 0.22 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 6 96628890 124190550 1 10 458 2 1 1 0 6 0.57 0.62 7 0 0 7 3 7 9 3 3 11.02 0.64 99.11 0 2 1 Whitelist PRAD-CA 12 0.68 0.84 0 0 0.64 0 Linked to low confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 14 0.02 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 7 29672656 158956063 1 12 458 5 0 1 0 6 0.01 0.68 5 0 0 5 3 5 5 3 5 11.02 0.38 97.01 0 2 0 Whitelist PRAD-CA 0.54 0.88 0 0 0.19 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 18 0.02 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 8 12585867 142127032 1 21 458 7 3 1 1 9 0.05 0.83 22 0 0 22 7 22 23 7 7 11.02 18.49 77.97 10 2 1 Whitelist PRAD-CA 4_5 0.68 0.97 0 0 0.46 0 Linked to high confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 33 0.04 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 9 32905998 33235978 2 2 458 1 0 1 0 0 0.57 0 1 0 0 NA NA NA 4 3 3 11.02 0.21 99.61 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 4 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 10 NA NA 0 0 458 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 11 6102762 104228614 33 38 458 7 6 9 11 5 0.62 0 32 0 0 32 15 32 35 15 35 11.02 5.42 91.34 0 2 1 Whitelist PRAD-CA 13 0.62 0 0 0 0.69 0 High confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 71 0.08 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 12 40224539 88916203 12 20 458 5 5 1 1 8 0.15 0.03 11 0 0 11 6 6 19 6 7 11.02 10.53 89.39 0 2 1 Whitelist PRAD-CA 0.86 0.1 0 0 0.59 0 Low confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA With other complex events 32 0.03 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 13 82314051 113900734 6 12 458 3 2 0 1 6 0.34 0 11 0 0 11 8 11 25 22 22 11.02 17.6 82.4 0 1 2 Whitelist PRAD-CA 11 0.62 0 0 0 0.59 0 Linked to high confidence PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA Canonical without polyploidization 18 0.02 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0249 14 40427717 92464191 1 2 458 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 11.02 0 100 0 2 NA Whitelist PRAD-CA 0.54 0 0 0 0.48 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 4 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 15 NA NA 0 0 458 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 16 NA NA 0 0 458 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 17 38433604 38582165 1 1 458 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 11.02 0 100 0 2 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 18 59070863 65996134 3 3 458 2 0 0 1 0 0.3 0.11 7 0 0 7 7 7 15 15 15 11.02 10.3 89.65 0 2 1 Whitelist PRAD-CA 0.62 0.28 0 0 0.59 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 19 23802150 23883479 1 1 458 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 11.02 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.01 NA NA 0.59 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 20 NA NA 0 0 458 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 21 NA NA 0 0 458 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.17 NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 22 NA NA 0 0 458 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0249 X 4064049 5220436 4 4 458 1 1 1 1 0 1 0 1 0 0 NA NA NA NA NA NA 11.02 100 0 0 1 NA Whitelist PRAD-CA 1 0 0 0 1 0 No PRAD-CA CPCG0249 PRAD 0.69 1.87 Prost-AdenoCA NA 8 0.01 NA 2 PRAD-CA DO51094 CPCG0249 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 1 247286989 247337168 1 1 28 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 5 5 5 5.35 0.44 99.56 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 2 NA NA 0 0 28 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA 11 5 11 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 3 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 4 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 5 NA NA 0 0 28 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA 12 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.5 0 NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA 17 7 17 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 7 NA NA 0 0 28 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 13 5 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.07 0 NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 8 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 9 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 7 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA 7 3 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 11 NA NA 0 0 28 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA 8 3 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.33 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 12 NA NA 0 0 28 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 9 7 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.14 0 NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 14 24442934 24485717 2 2 28 1 1 0 0 0 0.57 0.22 1 NA 0 NA NA NA 5 3 5 5.35 0.22 83.87 0 2 NA Whitelist PRAD-CA 0.68 0.45 NA 0 0.64 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 16 NA NA 0 0 28 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 19 NA NA 0 0 28 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.68 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 20 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 21 39954358 42876005 1 1 28 1 0 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 5.35 0 77.46 0 2 NA Whitelist PRAD-CA 0.62 0.54 NA NA 0.59 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0250 X NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0250 PRAD 0.26 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51095 CPCG0250 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 1 8548859 155277364 5 8 67 2 0 2 1 3 0.53 0.02 13 0 0 13 5 6 14 5 6 26.23 31.03 65.93 0 2 3 Whitelist PRAD-CA 0.87 0.08 0 0 0.64 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 13 0.1 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 2 NA NA 0 0 67 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA 7 3 6 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.15 NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 3 9531696 111833851 10 20 67 1 2 3 4 10 0.57 0 6 0 0 6 5 6 22 8 8 26.23 27.81 72.05 3 1 2 Whitelist PRAD-CA 0.96 0 0 0 0.64 0 Low confidence PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA Canonical without polyploidization 30 0.22 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 4 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 5 NA NA 0 0 67 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 8 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.32 NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 6 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 7 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 8 126163867 126220548 1 1 67 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 8 26.23 0.17 96.3 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 9 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 10 115339327 116021844 1 1 67 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 7 0 3 26.23 47.1 49.46 0 1 3 Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 11 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 12 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 13 24304433 24318756 1 1 67 0 0 1 0 0 0.39 0 1 0 NA NA NA NA 6 3 3 26.23 5.47 80.38 0 3 NA Whitelist PRAD-CA 0.62 0 0 NA 0.59 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 14 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 15 44073146 62098218 1 1 67 0 0 0 1 0 0.39 0.04 2 0 NA NA NA NA 6 0 4 26.23 62.23 22.36 0 2 3 Whitelist PRAD-CA 0.62 0.13 0 NA 0.59 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 16 73979029 80691272 2 12 67 1 0 1 0 10 0.57 0 11 0 0 11 3 7 18 3 7 26.23 57.95 28.82 0 1 2 Whitelist PRAD-CA 3 0.93 0 0 0 0.64 0 Linked to low confidence PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA With other complex events 14 0.1 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 17 42436541 43936463 1 1 67 1 0 0 0 0 0.39 0.7 2 NA NA NA NA NA 5 3 4 26.23 95.55 0 0 3 4 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 18 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 19 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 20 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 21 42872694 46565039 1 2 67 0 0 1 0 1 0.39 0 5 0 0 5 5 5 8 6 6 26.23 10.92 57.4 0 5 2 Whitelist PRAD-CA 3 0.68 0 0 0 0.59 0 Linked to low confidence PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA With other complex events 3 0.02 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 22 NA NA 0 0 67 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA 6 0 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.15 NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0251 X NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0251 PRAD 0.24 2.2 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51096 CPCG0251 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 1 157348117 157458044 1 1 44 0 0 0 1 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 8.83 0 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.5 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 2 114773946 127934256 4 5 44 0 1 1 2 1 0.57 0 9 0 0 9 9 9 15 15 15 8.83 6.47 93.42 0 2 1 Whitelist PRAD-CA 0.68 0.02 0 0 0.64 0 High confidence PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA Canonical without polyploidization 9 0.1 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0255 3 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 4 155768900 158556596 2 2 44 0 0 1 1 0 0.57 0 4 0 0 4 4 4 11 11 11 8.83 2.53 97.46 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 High confidence PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA Canonical without polyploidization 4 0.05 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0255 5 746178 838326 1 1 44 1 0 0 0 0 0.39 0.36 1 0.03 NA NA NA NA NA NA NA 8.83 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.61 0.03 NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 6 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 7 158925976 158956356 1 1 44 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 8.83 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 8 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 9 NA NA 0 0 44 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 10 58665641 58678851 1 1 44 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 8.83 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 11 4262665 34883993 1 2 44 1 0 1 0 0 0.57 0.15 4 0 0 4 4 4 5 5 5 8.83 12.91 83.17 0 1 2 Whitelist PRAD-CA 0.68 0.35 0 0 0.64 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 12 104373612 125801148 1 1 44 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.83 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 13 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 14 74006879 106727613 1 2 44 0 2 0 0 0 0.11 0.01 1 0 0 NA NA NA NA NA NA 8.83 0.05 99.37 0 2 NA Whitelist PRAD-CA 0.54 0.05 0 0 0.48 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 15 24412689 24487685 1 1 44 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.83 0 99.87 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 16 25066214 25137510 1 1 44 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.83 0 99.89 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 17 NA NA 0 0 44 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 18 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 19 NA NA 0 0 44 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 20 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 21 NA NA 0 0 44 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 22 NA NA 0 0 44 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.66 NA NA NA 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0255 X 142669933 142686561 1 1 44 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.83 100 0 0 1 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0255 PRAD 0.58 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51097 CPCG0255 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 1 156920296 246896381 2 4 64 0 0 2 2 0 0.26 0.35 6 0 0 6 5 6 7 5 7 7.29 0.69 99.31 0 2 0 Whitelist PRAD-CA 0.62 0.6 0 0 0.59 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 2 171797704 173861989 2 4 64 0 1 1 0 2 0.57 0.82 1 0 0 NA NA NA 7 5 5 7.29 0.04 99.85 0 2 NA Whitelist PRAD-CA 1 0.96 0 0 0.64 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 3 71779077 116888777 1 2 64 2 0 0 0 0 0.11 0.63 1 0 0 NA NA NA 5 5 5 7.29 0.03 99.92 0 2 NA Whitelist PRAD-CA 0.54 0.84 0 0 0.48 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 4 15957041 142082643 1 5 64 1 0 1 1 2 0.8 0.62 5 0 0 5 3 5 5 3 5 7.29 0.03 99.96 0 2 0 Whitelist PRAD-CA 0.93 0.83 0 0 0.84 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 5 137274453 173139890 1 6 64 2 0 0 0 4 0.11 0.12 4 0 0 4 4 4 19 15 19 7.29 1.32 96 0 1 2 Whitelist PRAD-CA 10 0.62 0.31 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA Canonical without polyploidization 8 0.06 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 6 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 7 1233620 29459256 1 3 64 0 0 0 1 2 0.39 0.4 3 0.01 0.02 NA NA NA 5 5 5 7.29 0.25 96.93 0 2 0 Whitelist PRAD-CA 0.62 0.64 0.01 0.02 0.59 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 8 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 5 6 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 9 3210234 3229046 1 1 64 1 0 0 0 0 0.39 0.04 1 0.03 NA NA NA NA NA NA NA 7.29 0.01 99.31 0 2 NA Whitelist PRAD-CA 0.62 0.14 0.03 NA 0.59 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 10 753210 118664596 8 13 64 2 2 2 2 5 1 0 26 0 0 26 9 15 26 9 15 7.29 10.84 85.7 0 2 1 Whitelist PRAD-CA 5 0.99 0 0 0 1 1 High confidence PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA With other complex events 21 0.16 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 11 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 12 68146404 122271119 1 3 64 3 0 0 0 0 0.03 1 3 0 0 NA NA NA 7 7 7 7.29 0.14 96.11 0 2 0 Whitelist PRAD-CA 0.41 1 0 0 0.33 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 13 NA NA 0 0 64 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 14 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 15 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 16 30311463 79341601 1 1 64 0 1 0 0 0 0.39 1 8 NA NA 8 3 7 8 3 4 7.29 11.96 87.52 0 2 0 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 17 40056595 79844693 1 4 64 3 1 0 0 0 0.11 0.1 6 0 0 6 6 6 7 7 7 7.29 12.82 87.13 0 1 2 Whitelist PRAD-CA 0.54 0.26 0 0 0.48 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 18 NA NA 0 0 64 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.49 NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 19 NA NA 0 0 64 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.61 NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 20 NA NA 0 0 64 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 21 NA NA 0 0 64 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.4 NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 22 44302436 44829517 2 2 64 1 0 1 0 0 0.57 0 4 0 0 4 4 4 7 7 7 7.29 0.99 99.01 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0256 X NA NA 0 0 64 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.79 NA NA NA 1 No PRAD-CA CPCG0256 PRAD 0.65 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51098 CPCG0256 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 1 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 2 67093759 170590948 1 6 45 2 0 2 0 2 0.26 0.05 11 0 0 11 5 7 13 5 8 7.74 0.71 99.18 0 2 0 Whitelist PRAD-CA 3 0.62 0.17 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA With other complex events 10 0.11 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 3 119241441 156069152 7 7 45 2 1 2 2 0 0.93 0 8 0 0 8 8 8 21 9 21 7.74 4.51 95.36 0 1 2 Whitelist PRAD-CA 0.96 0 0 0 0.95 1 High confidence PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA Canonical without polyploidization 14 0.16 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 4 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 5 NA NA 0 0 45 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA 19 11 19 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 6 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 12 11 11 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 7 99723022 100009095 1 1 45 1 0 0 0 0 0.39 0.73 2 0 NA NA NA NA 11 3 5 7.74 0.32 97.02 0 1 2 Whitelist PRAD-CA 0.62 0.91 0 NA 0.59 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 8 87188484 87418247 1 1 45 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA 12 3 12 7.74 28.47 68.11 0 1 2 Whitelist PRAD-CA 0.62 0.54 NA NA 0.59 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 9 NA NA 0 0 45 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 10 21874645 23360281 2 2 45 0 0 1 1 0 0.57 1 2 NA 0 NA NA NA 8 5 8 7.74 1.45 95.11 0 1 2 Whitelist PRAD-CA 0.68 1 NA 0 0.64 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 11 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 10 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 12 65138378 67628171 1 2 45 2 0 0 0 0 0.11 0.47 4 0 0 4 4 4 10 5 7 7.74 1.99 94.27 0 1 2 Whitelist PRAD-CA 0.54 0.71 0 0 0.48 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 13 75804151 76189197 2 2 45 1 0 1 0 0 0.57 0.2 2 0 0 NA NA NA 5 3 5 7.74 0.02 85.82 0 1 2 Whitelist PRAD-CA 0.68 0.42 0 0 0.64 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 14 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 16 4840838 71657078 1 1 45 0 1 0 0 0 0.39 0.34 3 NA NA NA NA NA 5 3 5 7.74 20.78 74.78 0 2 1 Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 17 29161380 42819547 1 2 45 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 7.74 2.08 97.92 0 1 2 Whitelist PRAD-CA 0.54 0.6 NA 0 0.48 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 19 NA NA 0 0 45 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.45 NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 21 31525854 42871419 1 5 45 1 0 0 1 3 0.57 0 3 0 0 NA NA NA NA NA NA 7.74 6.21 71.23 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 7 0.08 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0258 X 42605750 43337208 1 1 45 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 7.74 100 0 0 0 1 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0258 PRAD 0.3 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51099 CPCG0258 male alive C61 no treatment 49 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 3 NA NA 0 0 5 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.02 NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 11 NA NA 0 0 5 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.08 NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 16 72586336 72844769 1 1 5 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 4.99 0.29 99.62 0 1 2 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 2 0.2 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0259 X NA NA 0 0 5 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.46 NA NA NA 0 No PRAD-CA CPCG0259 PRAD 0.49 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51100 CPCG0259 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 1 21754019 247389899 1 3 75 1 0 0 2 0 0.3 0.28 1 0 0 NA NA NA NA NA NA 10.42 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.53 0 0 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 2 NA NA 0 0 75 0 0 0 0 0 NA 0.53 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 0 NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 3 39567902 71057646 10 12 75 5 3 1 1 2 0.22 0 1 0 0 NA NA NA 9 3 5 10.42 0.38 99.57 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 22 0.15 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 4 70087925 144979162 1 2 75 0 1 1 0 0 0.57 0.82 1 0 0 NA NA NA NA NA NA 10.42 0 99.97 0 2 NA Whitelist PRAD-CA 0.68 0.96 0 0 0.64 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 5 163579966 163604076 1 1 75 0 0 0 1 0 0.39 1 1 0 NA NA NA NA 9 3 3 10.42 0.16 97.17 0 2 NA Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 6 84592674 118634292 2 2 75 0 1 0 1 0 0.57 0.09 3 0 0 NA NA NA NA NA NA 10.42 0.01 99.84 0 2 4 Whitelist PRAD-CA 0.68 0.25 0 0 0.64 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 7 2708547 102041740 1 2 75 0 0 0 1 1 0.39 0.6 18 0 0 18 6 12 19 6 12 10.42 59.59 37.83 0 2 1 Whitelist PRAD-CA 0.68 0.82 0 0 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 8 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 9 NA NA 0 0 75 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 10 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 11 50073000 68411399 1 2 75 0 1 1 0 0 0.57 0.4 5 0 0 5 0 3 7 3 3 10.42 0.81 98.76 0 2 0 Whitelist PRAD-CA 0.68 0.65 0 0 0.64 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 12 NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 13 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 14 106649971 106841749 1 1 75 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA NA NA NA 10.42 0 99.53 0 2 NA Whitelist PRAD-CA 0.62 0.75 NA NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 15 24671998 24722702 1 1 75 0 1 0 0 0 0.39 0.16 1 0 NA NA NA NA NA NA NA 10.42 1.15 98.72 0 2 NA Whitelist PRAD-CA 0.62 0.36 0 NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 16 25066217 25137396 1 1 75 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 10.42 24.48 75.42 0 2 NA Whitelist PRAD-CA 0.62 0.7 NA NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 17 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 18 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 19 44893382 44974710 1 1 75 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.42 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 20 NA NA 0 0 75 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 21 39815030 42869409 1 3 75 1 0 0 0 2 0.39 0 3 0 0 NA NA NA NA NA NA 10.42 0.02 77.44 0 2 1 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 22 45654297 46478054 1 1 75 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 6 6 6 10.42 16.04 83.96 0 1 2 Whitelist PRAD-CA 0.62 0.46 NA NA 0.59 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0262 X NA NA 0 0 75 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0262 PRAD 0.77 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51102 CPCG0262 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 1 22086831 55749183 2 5 67 1 1 0 0 3 0.57 0.37 1 0 0 NA NA NA 6 3 4 17.52 0.26 99.74 0 2 NA Whitelist PRAD-CA 0.93 0.62 0 0 0.64 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 7 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 2 NA NA 0 0 67 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 3 51760828 135855244 21 21 67 6 5 6 4 0 0.91 0 17 0 0 17 5 7 21 5 7 17.52 49.44 50.51 3 3 2 Whitelist PRAD-CA 0.95 0 0 0 0.94 1 Low confidence PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA With other complex events 42 0.31 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 4 NA NA 0 0 67 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.33 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 5 88663013 120102185 1 2 67 1 0 1 0 0 0.57 0.31 3 0 0 NA NA NA 7 5 7 17.52 0.82 96.51 0 2 1 Whitelist PRAD-CA 0.68 0.57 0 0 0.64 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 6 NA NA 0 0 67 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 7 NA NA 0 0 67 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 8 50690802 90644745 4 11 67 0 2 1 1 7 0.57 0 15 0 0 15 10 12 19 10 14 17.52 39.23 57.24 0 2 1 Whitelist PRAD-CA 11 0.87 0 0 0 0.64 1 High confidence PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA Canonical without polyploidization 15 0.11 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 9 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 10 89625024 90419328 2 2 67 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 4 3 3 17.52 64.83 31.83 0 1 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 4 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 11 121125846 122406013 1 4 67 2 0 0 0 2 0.11 0.01 6 0 0 6 6 6 12 9 10 17.52 5.92 90.87 0 1 2 Whitelist PRAD-CA 0.68 0.06 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA Canonical without polyploidization 6 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 12 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 13 NA NA 0 0 67 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 0 NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 14 84335383 84346354 1 1 67 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 6 3 5 17.52 2.81 82.2 0 2 4 Whitelist PRAD-CA 0.62 0.37 0 NA 0.59 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 15 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 16 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 17 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 18 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 19 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 20 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 21 NA NA 0 0 67 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 22 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0263 X NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0263 PRAD 0.39 1.97 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 2 PRAD-CA DO51103 CPCG0263 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 1 NA NA 0 0 68 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 2 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 3 69189064 81814797 2 2 68 0 0 1 1 0 0.57 0.48 2 0 0 NA NA NA 5 5 5 8.11 6.49 93.46 0 1 2 Whitelist PRAD-CA 0.68 0.72 0 0 0.64 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 4 NA NA 0 0 68 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 5 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 6 NA NA 0 0 68 0 0 0 0 0 NA 0.6 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.82 0 NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 7 86932532 119901540 6 14 68 2 2 1 1 8 0.88 0 1 0 0 NA NA NA NA NA NA 8.11 0 99.76 0 2 NA Whitelist PRAD-CA 0.9 0 0 0 0.91 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 20 0.15 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 8 NA NA 0 0 68 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 9 323487 18787888 11 19 68 2 2 6 1 8 0.15 0 1 0 0 NA NA NA NA NA NA 8.11 0 99.3 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 30 0.22 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 10 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 11 113912302 117914149 1 5 68 1 0 1 0 3 0.57 0.14 4 0 0 4 4 4 5 5 5 8.11 2.75 97.1 0 1 2 Whitelist PRAD-CA 0.93 0.33 0 0 0.64 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 12 30457226 30724972 1 1 68 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 4 4 4 8.11 22.69 77.29 0 1 2 Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 13 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 14 90280713 91928092 1 1 68 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 8.11 1.53 98.47 0 2 3 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 15 NA NA 0 0 68 0 0 0 0 0 NA 0.71 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 16 NA NA 0 0 68 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 17 1541665 77956301 2 6 68 0 1 0 1 4 0.57 0 7 0 0 7 7 7 7 7 7 8.11 3.37 96.63 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 19 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 21 39864574 42875839 1 5 68 1 0 0 0 4 0.39 0 4 0 0 4 4 4 5 5 5 8.11 0.11 77.25 0 1 2 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 22 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0265 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0265 PRAD 0.7 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51104 CPCG0265 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 1 11807272 52303365 5 14 121 1 3 1 0 9 0.28 0 4 0 0 4 4 4 15 9 15 7.89 3.8 96.2 0 1 2 Whitelist PRAD-CA 0.54 0 0 0 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 19 0.08 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 2 130907419 236031890 1 14 121 2 0 0 1 11 0.3 0 14 0 0 14 9 13 18 11 15 7.89 1.18 98.73 0 2 0 Whitelist PRAD-CA 1_10_12_3 0.62 0.01 0 0 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 17 0.07 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 3 37943012 196988770 1 5 121 2 0 0 1 2 0.3 0.86 7 0 0 7 5 7 11 9 9 7.89 0.08 99.76 0 2 0 Whitelist PRAD-CA 0.62 0.99 0 0 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 4 179129619 179156242 1 1 121 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA 13 13 13 7.89 0.2 99.78 0 2 NA Whitelist PRAD-CA 0.62 0.1 NA NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 5 165084830 165944769 1 1 121 0 0 0 1 0 0.39 0.26 1 0 NA NA NA NA 19 9 19 7.89 0.64 96.69 0 2 NA Whitelist PRAD-CA 0.62 0.5 0 NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 6 133678889 142503850 3 5 121 0 0 2 1 2 0.3 0.02 3 0 0 NA NA NA 9 7 7 7.89 3.1 96.66 0 2 3 Whitelist PRAD-CA 0.62 0.08 0 0 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 7 NA NA 0 0 121 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA 13 5 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.67 NA NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 8 14023487 99619005 1 8 121 1 0 1 1 5 0.8 0 9 0 0 9 4 5 13 5 7 7.89 15.9 80.68 0 2 1 Whitelist PRAD-CA 10 0.62 0 0 0 0.84 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 11 0.05 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 9 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 7 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 10 11546313 103606002 1 21 121 1 1 1 1 17 1 0 16 0 0 16 11 16 19 13 19 7.89 18.59 77.91 0 2 1 Whitelist PRAD-CA 12_2 0.68 0 0 0 1 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 25 0.1 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 11 68282668 68411411 1 1 121 0 1 0 0 0 0.39 0.38 1 0 NA NA NA NA 11 7 11 7.89 0.87 95.64 0 2 NA Whitelist PRAD-CA 0.62 0.63 0 NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 12 12154419 18225717 2 11 121 1 0 1 0 9 0.57 0 4 0 0 4 4 4 14 9 14 7.89 11.37 84.89 0 1 2 Whitelist PRAD-CA 10_2 0.62 0 0 0 0.64 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 13 0.05 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 13 44468850 73512497 1 3 121 0 0 1 1 1 0.57 1 1 0 0 NA NA NA NA NA NA 7.89 0 85.85 0 2 NA Whitelist PRAD-CA 0.87 1 0 0 0.64 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 14 106134634 106208132 1 1 121 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 7.89 0 84.09 0 2 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 15 51350990 91591956 1 2 121 1 0 1 0 0 0.57 0.78 3 NA 0 NA NA NA 5 3 5 7.89 0.22 84.37 0 2 1 Whitelist PRAD-CA 0.68 0.93 NA 0 0.64 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 16 46965801 76813629 1 2 121 0 0 1 0 1 0.39 0.14 3 0 NA NA NA NA NA NA NA 7.89 0.07 99.84 0 2 1 Whitelist PRAD-CA 0.68 0.34 0 NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 17 44119207 56481818 1 2 121 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 7.89 2.74 97.26 0 2 NA Whitelist PRAD-CA 0.68 0.07 0 0 0.64 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 18 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 19 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 20 NA NA 0 0 121 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 21 39901397 42871011 1 1 121 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 7.89 6.26 71.43 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 22 25812387 25956410 1 1 121 0 1 0 0 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 7.89 0 76.22 0 2 NA Whitelist PRAD-CA 0.62 0.87 NA NA 0.59 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0266 X NA NA 0 0 121 0 0 0 0 0 NA 1 NA 0.04 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0.04 NA NA 0 No PRAD-CA CPCG0266 PRAD 0.51 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51105 CPCG0266 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 1 204042528 237113743 10 20 63 4 4 1 1 10 0.31 0 14 0 0 14 11 11 14 11 11 5.43 1.04 98.96 0 2 1 Whitelist PRAD-CA 3 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA Canonical without polyploidization 30 0.24 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 2 NA NA 0 0 63 0 0 0 0 0 NA 0.82 NA 0.43 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.96 0.43 NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 3 10350196 84771997 4 15 63 1 1 1 1 11 1 0 8 0 0 8 7 8 9 7 9 5.43 0.65 99.18 0 2 1 Whitelist PRAD-CA 1 0.68 0 0 0 1 1 High confidence PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA Canonical without polyploidization 19 0.15 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 4 39535311 39963020 1 1 63 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 5.43 0.22 99.66 0 1 2 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 5 163363858 163419050 1 1 63 1 0 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 5.43 0.03 99.86 0 0 2 Whitelist PRAD-CA 0.62 0.69 NA NA 0.59 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 6 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 7 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 8 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 9 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 10 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 11 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 12 11321597 13299268 1 2 63 0 0 0 1 1 0.39 0.01 3 0 NA NA NA NA NA NA NA 5.43 1.47 98.45 0 2 1 Whitelist PRAD-CA 0.68 0.04 0 NA 0.59 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 13 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 14 94328741 95878726 1 1 63 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 5.43 1.44 98.56 0 1 2 Whitelist PRAD-CA 0.62 0.7 NA NA 0.59 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 15 69134389 100833283 4 9 63 2 1 0 1 5 0.57 0 5 0 0 5 5 5 9 9 9 5.43 7.03 92.85 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.64 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 13 0.1 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 16 NA NA 0 0 63 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 17 73739276 73753173 1 1 63 0 0 1 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 5.43 0 100 0 2 NA Whitelist PRAD-CA 3 0.62 0 0 NA 0.59 1 Linked to high confidence PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA With other complex events 2 0.02 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 18 NA NA 0 0 63 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.89 NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 19 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 20 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 21 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 22 NA NA 0 0 63 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0267 X NA NA 0 0 63 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.79 NA NA NA 1 No PRAD-CA CPCG0267 PRAD 0.91 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51106 CPCG0267 male alive C61 no treatment 44 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 1 156391329 161122378 18 18 135 4 2 6 6 0 0.49 0 20 0 0 20 10 20 23 11 11 8.76 1.19 98.81 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA With other complex events 36 0.13 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 2 114724305 147241418 3 3 135 1 0 1 1 0 0.8 0.27 4 0 0 4 4 4 7 7 7 8.76 14.85 84.99 0 1 2 Whitelist PRAD-CA 0.87 0.52 0 0 0.84 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 3 149020215 149154069 2 2 135 1 0 1 0 0 0.57 1 1 0 0 NA NA NA 9 6 9 8.76 7.66 89.26 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 4 134635808 137495825 7 7 135 2 1 2 2 0 0.93 0 6 0 0 6 6 6 13 13 13 8.76 1.63 98.35 0 1 2 Whitelist PRAD-CA 0.96 0.01 0 0 0.95 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 14 0.05 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 5 86850288 103636603 14 15 135 2 4 4 4 1 0.84 0 13 0 0 13 8 13 15 8 8 8.76 7.78 92.09 0 1 2 Whitelist PRAD-CA 0.85 0 0 0 0.88 1 High confidence PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA Canonical without polyploidization 29 0.11 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 6 66095219 128649048 9 10 135 1 3 2 3 1 0.75 0 5 0 0 5 5 5 5 5 5 8.76 23.42 76.44 0 2 1 Whitelist PRAD-CA 0.68 0.02 0 0 0.83 1 Low confidence PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA Canonical without polyploidization 19 0.07 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 7 NA NA 0 0 135 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.05 NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 8 111750277 112553266 1 1 135 0 0 1 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 8.76 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.38 NA NA 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 9 NA NA 0 0 135 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.21 NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 10 56644895 56655488 1 1 135 1 0 0 0 0 0.39 0.3 1 NA NA NA NA NA NA NA NA 8.76 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.54 NA NA 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 11 48219131 82410826 1 3 135 2 1 0 0 0 0.3 0.54 1 0 0 NA NA NA NA NA NA 8.76 0 99.57 0 2 NA Whitelist PRAD-CA 0.62 0.77 0 0 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 12 30875787 125397269 1 3 135 3 0 0 0 0 0.03 0.84 5 0 0 5 5 5 5 5 5 8.76 0.74 99.18 0 2 1 Whitelist PRAD-CA 0.41 0.97 0 0 0.33 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 13 65335678 65623742 1 1 135 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 8.76 0.25 85.6 0 1 2 Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 14 43971931 44987960 1 1 135 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 8.76 0 85 0 2 NA Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 15 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 16 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 17 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 18 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 19 42711624 50083986 1 2 135 1 0 0 1 0 0.57 1 3 NA 0 NA NA NA NA NA NA 8.76 11.54 88.28 0 2 1 Whitelist PRAD-CA 0.68 1 NA 0 0.64 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 20 15244268 15728543 1 1 135 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 8.76 0 99.01 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 21 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 22 NA NA 0 0 135 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0268 X 139757689 153029723 2 4 135 0 1 2 1 0 0.57 0.84 3 0 0 NA NA NA NA NA NA 8.76 100 0 5 1 0 Whitelist PRAD-CA 0.68 0.98 0 0 0.64 1 No PRAD-CA CPCG0268 PRAD 0.34 1.89 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51107 CPCG0268 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 1 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 3 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 4 90458895 91340339 1 1 8 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 5.91 0.46 99.51 0 2 3 Whitelist PRAD-CA 0.62 0.68 NA NA 0.59 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 2 0.12 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 5 NA NA 0 0 8 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.65 NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 6 NA NA 0 0 8 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.64 NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 12 8030847 108788162 5 5 8 2 1 1 1 0 0.9 0 11 0 0 11 7 7 12 8 8 5.91 7.26 88.94 0 1 2 Whitelist PRAD-CA 0.93 0 0 0 0.92 0 High confidence PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA Canonical without polyploidization 10 0.62 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0269 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0269 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0269 PRAD 0.69 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51108 CPCG0269 male alive C61 no treatment 68 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 1 235474643 235573590 1 1 81 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA 15 7 7 10.68 0.09 99.91 0 2 NA Whitelist PRAD-CA 0.62 0.08 NA NA 0.59 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 2 138429668 155586709 8 8 81 2 0 3 3 0 0.39 0.02 9 0 0 9 9 9 23 9 11 10.68 1.41 98.48 1 2 1 Whitelist PRAD-CA 0.62 0.09 0 0 0.59 0 High confidence PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA Canonical without polyploidization 16 0.1 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 3 63988785 115208379 1 2 81 1 1 0 0 0 0.57 0.83 8 0 0 8 3 4 15 5 7 10.68 5.23 94.63 0 2 0 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 4 115912472 134375016 9 9 81 3 4 1 1 0 0.39 0 9 0 0 9 3 9 15 7 7 10.68 5.63 94.35 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 18 0.11 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 5 42295258 93932503 2 2 81 0 0 1 1 0 0.57 0.82 7 0 0 7 5 7 11 5 7 10.68 0.66 96.66 0 2 0 Whitelist PRAD-CA 0.68 0.96 0 0 0.64 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 6 76943983 98343752 2 5 81 0 1 1 2 1 0.57 0.03 9 0 0 9 7 9 9 7 7 10.68 10.49 89.37 0 1 0 Whitelist PRAD-CA 0.93 0.11 0 0 0.64 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 7 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA 15 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 8 49203760 66529320 4 5 81 0 1 1 2 1 0.57 0.2 7 0 0 7 7 7 10 8 10 10.68 38.32 61.22 0 2 1 Whitelist PRAD-CA 0.68 0.42 0 0 0.64 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 9 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 10 57053189 126746695 5 6 81 3 0 1 1 1 0.28 0 8 0 0 8 8 8 15 11 13 10.68 28.18 68.36 0 1 2 Whitelist PRAD-CA 0.54 0 0 0 0.59 0 High confidence PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA Canonical without polyploidization 11 0.07 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False negative; manually included PRAD-CA::CPCG0324 11 78974144 79086910 1 1 81 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 14 4 9 10.68 0.93 98.65 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 12 51732512 111658995 1 4 81 2 0 0 0 2 0.11 0.79 2 0 0 NA NA NA 5 5 5 10.68 0.21 96.05 0 1 2 Whitelist PRAD-CA 0.68 0.94 0 0 0.48 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 13 51683703 56933149 2 2 81 0 0 1 1 0 0.57 0.36 3 0 0 NA NA NA 7 5 5 10.68 0.08 99.92 0 2 4 Whitelist PRAD-CA 0.68 0.62 0 0 0.64 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 14 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 15 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 16 58084223 60219060 1 1 81 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 6 4 4 10.68 33.11 66.78 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 17 6921653 8082474 1 1 81 1 0 0 0 0 0.39 0.07 2 0.11 NA NA NA NA NA NA NA 10.68 1.43 98.57 0 1 2 Whitelist PRAD-CA 0.62 0.21 0.11 NA 0.59 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 18 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 19 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 20 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 21 39928142 42879042 3 3 81 0 1 1 1 0 0.8 0 2 0 0 NA NA NA 4 4 4 10.68 13.65 64.16 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.84 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 22 NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0324 X NA NA 0 0 81 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0324 PRAD 0.5 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51109 CPCG0324 male alive C61 no treatment 64 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 1 98988888 109534537 3 6 123 0 3 0 0 3 0.03 0.24 8 0 0 8 8 8 31 11 15 10.34 4.68 95.32 0 1 2 Whitelist PRAD-CA 14 0.68 0.48 0 0 0.33 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 2 71318777 235597578 7 19 123 2 1 2 2 12 0.93 0 27 0 0 27 5 9 35 5 9 10.34 3.92 93.39 0 2 4 Whitelist PRAD-CA 1_3 0.93 0 0 0 0.95 1 Linked to high confidence PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA With other complex events 26 0.11 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 3 5905087 156509264 25 35 123 6 5 6 8 10 0.86 0 27 0 0 27 9 21 27 9 21 10.34 10.34 89.56 0 2 1 Whitelist PRAD-CA 2 0.87 0 0 0 0.9 1 High confidence PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA With other complex events 60 0.24 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 4 39616713 91692419 1 2 123 1 1 0 0 0 0.57 0.15 10 0 0 10 5 6 15 5 7 10.34 1.37 98.61 0 2 4 Whitelist PRAD-CA 0.68 0.35 0 0 0.64 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 5 NA NA 0 0 123 0 0 0 0 0 NA NA NA NA NA NA NA NA 13 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 6 66822129 145876559 1 2 123 2 0 0 0 0 0.11 0.25 4 0 0 4 4 4 7 5 7 10.34 31.24 68.61 0 1 2 Whitelist PRAD-CA 0.54 0.5 0 0 0.48 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 7 139241042 140911139 1 1 123 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 17 9 9 10.34 1.35 95.76 0 2 3 Whitelist PRAD-CA 0.62 0.07 NA NA 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 8 18009973 142391076 1 2 123 2 0 0 0 0 0.11 0.22 6 0 0 6 3 4 7 3 3 10.34 15.87 84.12 0 2 0 Whitelist PRAD-CA 0.54 0.45 0 0 0.48 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 9 NA NA 0 0 123 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA 15 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.26 NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 10 26837814 93718569 8 18 123 1 3 2 2 10 0.8 0 14 0 0 14 9 14 21 10 10 10.34 6.92 92.9 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.84 1 High confidence PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA Canonical without polyploidization 26 0.11 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 11 93622189 93644122 1 1 123 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA 11 9 9 10.34 1.03 98.54 0 2 NA Whitelist PRAD-CA 0.62 0.16 NA NA 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 12 59174301 122331154 4 17 123 2 1 1 0 13 0.57 0 11 0 0 11 3 5 15 5 5 10.34 13.52 86.4 0 2 3 Whitelist PRAD-CA 10 0.99 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA With other complex events 21 0.09 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 13 NA NA 0 0 123 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 14 22919002 102276752 1 6 123 0 1 1 1 3 0.8 0 12 0 0 12 6 12 17 9 17 10.34 3.89 95.2 0 2 1 Whitelist PRAD-CA 1 0.68 0.01 0 0 0.84 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 15 24807073 25216882 1 1 123 0 1 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 10.34 0.4 99.6 0 2 3 Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 16 NA NA 0 0 123 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 17 42402402 45326697 1 4 123 1 0 0 1 2 0.57 0.58 6 0 0 6 6 6 7 7 7 10.34 2.11 97.87 0 1 2 Whitelist PRAD-CA 0.68 0.8 0 0 0.64 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 18 NA NA 0 0 123 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 19 8315818 8533242 1 1 123 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA 5 3 3 10.34 0.65 99.17 0 2 3 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 20 NA NA 0 0 123 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 21 39908952 42872299 1 1 123 1 0 0 0 0 0.39 0.02 2 0 NA NA NA NA 4 4 4 10.34 13.7 64.13 0 1 2 Whitelist PRAD-CA 0.62 0.07 0 NA 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 22 17595415 20307027 3 3 123 2 1 0 0 0 0.3 0.02 3 0 0 NA NA NA NA NA NA 10.34 4.69 84.2 0 2 1 Whitelist PRAD-CA 0.62 0.07 0 0 0.59 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0331 X NA NA 0 0 123 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0331 PRAD 0.41 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51110 CPCG0331 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 1 85623801 205751955 1 1 109 1 0 0 0 0 0.39 0.86 1 0 0 NA NA NA NA NA NA 9.85 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.99 0 0 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 2 32086423 240981113 2 2 109 1 0 1 0 0 0.57 0.17 2 0 0 NA NA NA NA NA NA 9.85 11.33 88.58 0 1 2 Whitelist PRAD-CA 0.68 0.38 0 0 0.64 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 3 10057586 195447850 1 8 109 4 1 0 0 3 0.04 0.01 3 0 0 NA NA NA NA NA NA 9.85 0.06 99.8 0 2 1 Whitelist PRAD-CA 0.28 0.06 0 0 0.36 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 13 0.06 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 4 54239792 100431963 1 4 109 3 1 0 0 0 0.11 0.45 9 0 0 9 5 9 9 5 5 9.85 2.02 97.74 0 2 1 Whitelist PRAD-CA 0.54 0.69 0 0 0.48 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 5 82686662 170789702 1 8 109 2 1 0 0 5 0.3 0.05 8 0 0 8 8 8 11 11 11 9.85 23.95 75.9 0 1 2 Whitelist PRAD-CA 10 0.68 0.16 0 0 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 11 0.05 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 6 68905005 118585845 1 2 109 2 0 0 0 0 0.11 0.22 1 0 0 NA NA NA NA NA NA 9.85 0 99.75 1 2 NA Whitelist PRAD-CA 0.54 0.45 0 0 0.48 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 7 29672657 158138533 1 2 109 2 0 0 0 0 0.11 0.67 5 0 0 5 0 5 7 4 7 9.85 0.61 96.88 0 2 0 Whitelist PRAD-CA 0.54 0.87 0 0 0.48 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 8 42900109 140565090 1 1 109 0 1 0 0 0 0.39 1 1 0 0 NA NA NA NA NA NA 9.85 17.77 82.11 0 2 NA Whitelist PRAD-CA 0.62 1 0 0 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 9 30422148 30455267 2 2 109 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 5 5 5 9.85 0.03 99.83 0 2 NA Whitelist PRAD-CA 0.68 0.02 0 0 0.64 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 10 24971445 115965169 3 9 109 0 1 2 0 6 0.3 0 9 0 0 9 6 9 9 6 9 9.85 5.31 91.3 0 1 2 Whitelist PRAD-CA 5 0.85 0.02 0 0 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 12 0.06 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 11 27324103 130903099 4 7 109 0 1 2 1 3 0.57 0.02 4 0 0 4 0 3 4 0 3 9.85 1.56 97.57 0 2 1 Whitelist PRAD-CA 10 0.68 0.08 0 0 0.64 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 11 0.05 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 12 10969789 18406369 2 2 109 0 0 1 1 0 0.57 0.65 2 0 0 NA NA NA 6 3 5 9.85 1.68 94.57 0 1 2 Whitelist PRAD-CA 0.68 0.86 0 0 0.64 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 13 40957036 83036842 3 3 109 2 1 0 0 0 0.3 0.28 6 0 0 6 5 6 9 5 7 9.85 23.82 76.18 0 2 1 Whitelist PRAD-CA 0.62 0.53 0 0 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 14 74010667 106376515 1 2 109 1 1 0 0 0 0.57 0.4 1 0 0 NA NA NA NA NA NA 9.85 0 99.09 0 2 NA Whitelist PRAD-CA 0.68 0.64 0 0 0.64 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 15 60459613 60764809 1 1 109 1 0 0 0 0 0.39 0.77 1 NA NA NA NA NA NA NA NA 9.85 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 16 60282456 60920179 1 1 109 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 4 5 9.85 11.03 88.64 0 2 4 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 17 NA NA 0 0 109 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 18 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 19 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 20 NA NA 0 0 109 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 21 NA NA 0 0 109 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 22 NA NA 0 0 109 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0334 X 120298735 120403378 1 1 109 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 9.85 100 0 0 0 1 Whitelist PRAD-CA 0.62 0.15 NA NA 0.59 0 No PRAD-CA CPCG0334 PRAD 0.77 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51111 CPCG0334 male alive C61 no treatment 53 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 1 NA NA 0 0 68 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 25 11 13 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 2 25183196 160453530 1 3 68 1 0 1 0 1 0.57 0.28 21 0.12 0 21 19 21 25 19 25 6.57 0.62 99.26 0 2 0 Whitelist PRAD-CA 0.87 0.52 0.12 0 0.64 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 3 NA NA 0 0 68 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 23 9 23 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 4 68409315 166008634 2 4 68 1 0 0 1 2 0.57 0.81 21 0 0 21 15 19 29 15 25 6.57 0.45 99.32 0 2 0 Whitelist PRAD-CA 1 0.95 0 0 0.64 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 5 10863552 137714175 1 8 68 1 0 0 1 6 0.57 0.04 27 0 0 27 9 27 33 9 33 6.57 1.07 96.27 0 2 0 Whitelist PRAD-CA 2 1 0.13 0 0 0.64 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 6 165451485 165551157 1 1 68 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 25 9 15 6.57 0.43 99.43 0 1 2 Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 7 NA NA 0 0 68 0 0 0 0 0 NA 1 NA NA NA NA NA NA 17 7 17 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 8 63930625 78804766 9 9 68 4 1 2 2 0 0.55 0 16 0 0 16 11 16 28 14 17 6.57 1.02 95.56 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 High confidence PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA Canonical without polyploidization 18 0.13 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 9 8444162 9454568 1 1 68 0 1 0 0 0 0.39 0.53 3 NA NA NA NA NA 15 15 15 6.57 0.38 98.95 0 2 0 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 10 NA NA 0 0 68 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 11 82374960 82386709 1 1 68 1 0 0 0 0 0.39 1 1 NA NA NA NA NA 29 21 29 6.57 1.65 97.93 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 12 91820954 91841784 1 1 68 1 0 0 0 0 0.39 0.56 2 0.1 NA NA NA NA 14 6 8 6.57 0.37 95.89 0 1 2 Whitelist PRAD-CA 0.62 0.79 0.1 NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 13 39791897 86395732 4 4 68 1 1 1 1 0 1 0.09 13 0 0 13 11 13 15 11 15 6.57 0.53 85.32 0 2 0 Whitelist PRAD-CA 1 0.24 0 0 1 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 14 NA NA 0 0 68 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.38 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 15 42345425 45416289 1 3 68 1 0 1 0 1 0.57 0.04 4 0 0 4 4 4 11 7 11 6.57 1.93 82.66 0 1 2 Whitelist PRAD-CA 0.87 0.14 0 0 0.64 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 16 77075671 85683627 1 1 68 0 1 0 0 0 0.39 0.11 1 NA NA NA NA NA 7 7 7 6.57 0.23 99.68 0 2 NA Whitelist PRAD-CA 0.62 0.28 NA NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 17 2785292 8181930 2 2 68 0 0 1 1 0 0.57 0 4 0 0 4 4 4 7 7 7 6.57 4.62 95.38 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 18 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 19 2842694 3540162 1 1 68 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 7 3 7 6.57 1.3 98.53 0 1 2 Whitelist PRAD-CA 0.62 0.05 0 NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 20 NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 21 39871188 42868976 1 1 68 1 0 0 0 0 0.39 0.57 2 NA NA NA NA NA 4 4 4 6.57 13.77 64.06 0 1 2 Whitelist PRAD-CA 0.62 0.79 NA NA 0.59 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 22 NA NA 0 0 68 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0336 X NA NA 0 0 68 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0336 PRAD 0.39 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51112 CPCG0336 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 1 57547197 154961158 6 8 51 2 0 2 2 2 0.57 0 1 0 0 NA NA NA NA NA NA 4.96 0 100 0 2 NA Whitelist PRAD-CA 0.87 0 0 0 0.64 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 14 0.14 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 2 NA NA 0 0 51 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.32 NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 3 27945845 115209676 3 3 51 1 0 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 4.96 0 99.86 0 2 NA Whitelist PRAD-CA 0.87 1 0 0 0.84 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 6 0.06 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 4 72570226 72581283 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.96 0 99.78 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 5 NA NA 0 0 51 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 6 NA NA 0 0 51 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 7 NA NA 0 0 51 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.61 NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 8 65182725 134883931 15 15 51 2 10 1 2 0 0 0 1 0 0 NA NA NA NA NA NA 4.96 0 99.89 2 2 NA Whitelist PRAD-CA 0.13 0 0 0 0.09 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 30 0.29 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 9 120167337 120247481 2 2 51 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 4.96 0 99.99 0 2 NA Whitelist PRAD-CA 0.68 1 NA 0 0.64 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 10 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 11 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 12 47579817 49398834 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.96 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 13 51103342 68124834 1 3 51 0 1 1 0 1 0.57 0.03 1 0 0 NA NA NA NA NA NA 4.96 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.11 0 0 0.64 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 5 0.05 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 15 48382620 71771078 1 1 51 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.96 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 16 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 17 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 18 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 19 NA NA 0 0 51 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0339 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0339 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51113 CPCG0339 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 1 NA NA 0 0 139 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.18 0 NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 2 68943656 208993580 2 2 139 0 0 1 1 0 0.57 0.09 5 0 0 5 5 5 11 11 11 10.1 0.14 99.75 0 2 0 Whitelist PRAD-CA 0.68 0.25 0 0 0.64 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 3 11477088 197633848 1 4 139 3 0 0 0 1 0.03 0.06 9 0.02 0 9 5 9 10 5 10 10.1 0.98 98.78 0 2 1 Whitelist PRAD-CA 0.54 0.2 0.02 0 0.33 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 4 97722576 98175873 1 1 139 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 7 5 7 10.1 0.29 99.69 0 1 2 Whitelist PRAD-CA 0.62 0.04 NA NA 0.59 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 5 53204904 155545927 29 29 139 9 8 6 6 0 0.82 0 24 0 0 24 9 22 27 10 12 10.1 42.02 55.3 0 1 2 Whitelist PRAD-CA 0.88 0 0 0 0.86 1 High confidence PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA With other complex events 58 0.21 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 6 18322627 152548190 28 39 139 6 9 6 7 11 0.84 0 22 0 0 22 22 22 23 23 23 10.1 4.1 95.75 0 1 2 Whitelist PRAD-CA 0.89 0 0 0 0.88 1 High confidence PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA Canonical without polyploidization 67 0.24 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 7 NA NA 0 0 139 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 8 4 4 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0 NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 8 38213558 41798153 4 4 139 0 1 1 2 0 0.57 0.7 4 0 0 4 4 4 9 5 9 10.1 14.11 85.88 0 1 2 Whitelist PRAD-CA 0.68 0.89 0 0 0.64 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 9 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 10 32944978 101273165 7 9 139 2 2 2 1 2 0.93 0.04 5 0 0 5 3 5 5 3 3 10.1 1.6 98.22 0 1 2 Whitelist PRAD-CA 0.85 0.13 0 0 0.95 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 16 0.06 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 11 4262658 18966252 1 3 139 2 0 1 0 0 0.3 0.69 3 0 0 NA NA NA 9 7 9 10.1 0.91 98.66 0 2 1 Whitelist PRAD-CA 0.62 0.89 0 0 0.59 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 12 41349257 41698950 2 2 139 0 0 1 1 0 0.57 0.16 1 0 0 NA NA NA 5 5 5 10.1 0.18 96.08 0 2 NA Whitelist PRAD-CA 0.68 0.36 0 0 0.64 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 13 32929249 85956801 1 2 139 2 0 0 0 0 0.11 0.64 3 NA 0 NA NA NA NA NA NA 10.1 21.24 64.61 0 2 1 Whitelist PRAD-CA 0.54 0.85 NA 0 0.48 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 14 64965327 81977066 1 1 139 1 0 0 0 0 0.39 0.33 1 NA NA NA NA NA 6 5 6 10.1 2.89 81.19 0 2 NA Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 15 44083370 58158928 1 2 139 2 0 0 0 0 0.11 0.6 4 NA 0 4 4 4 5 5 5 10.1 12.95 71.49 0 1 2 Whitelist PRAD-CA 0.54 0.81 NA 0 0.48 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 16 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 17 NA NA 0 0 139 0 0 0 0 0 NA 0.11 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.28 0 NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 18 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 19 44893350 44974703 1 1 139 0 0 0 1 0 0.39 0.02 1 0 NA NA NA NA 6 3 3 10.1 0.75 99.08 0 2 NA Whitelist PRAD-CA 0.62 0.08 0 NA 0.59 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 20 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 21 39833610 42866844 1 1 139 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 10.1 13.84 63.99 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 22 NA NA 0 0 139 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0340 X NA NA 0 0 139 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.16 NA NA NA 1 No PRAD-CA CPCG0340 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51114 CPCG0340 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 1 NA NA 0 0 31 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 2 202833339 223799819 1 3 31 3 0 0 0 0 0.03 0.33 4 0 0 4 4 4 5 5 5 9.07 0.15 99.76 0 1 2 Whitelist PRAD-CA 0.41 0.58 0 0 0.33 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 6 0.1 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 3 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 4 140712661 140811048 1 1 31 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 9.07 0.03 99.76 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 5 127464096 127496237 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 9 5 9 9.07 0.28 97.05 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 6 NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 7 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 8 423227 42814691 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.07 28.96 70.9 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 9 15104609 107350714 5 12 31 1 1 1 2 7 0.9 0 11 0 0 11 5 11 11 5 11 9.07 2.72 97.14 0 2 0 Whitelist PRAD-CA 0.68 0 0 0 0.92 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 17 0.27 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 10 NA NA 0 0 31 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.02 0 NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 11 107976456 108492575 1 1 31 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA 9 7 9 9.07 1.36 95.42 0 1 2 Whitelist PRAD-CA 0.62 0.86 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 12 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 13 35818294 85541363 1 1 31 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.07 43.17 42.67 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 14 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 15 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 16 67867993 88816688 1 3 31 1 0 0 0 2 0.39 0.05 3 NA 0 NA NA NA NA NA NA 9.07 23.12 76.78 0 2 1 Whitelist PRAD-CA 0.87 0.16 NA 0 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 4 0.06 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 17 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 18 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 19 NA NA 0 0 31 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.7 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 20 NA NA 0 0 31 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.74 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 21 39885805 42883252 1 1 31 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 9.07 6.23 71.13 0 1 2 Whitelist PRAD-CA 0.62 0.57 NA NA 0.59 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 22 NA NA 0 0 31 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0341 X NA NA 0 0 31 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0341 PRAD 0.55 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51115 CPCG0341 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 1 50187028 70255014 3 3 72 2 1 0 0 0 0.3 0.51 1 0 0 NA NA NA NA NA NA 7.32 0.38 99.62 0 2 NA Whitelist PRAD-CA 0.62 0.75 0 0 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 2 61542346 65123885 10 10 72 3 2 2 3 0 0.94 0 6 0 0 6 6 6 21 9 19 7.32 1.38 98.52 0 1 2 Whitelist PRAD-CA 0.96 0.01 0 0 0.96 1 Low confidence PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA Canonical without polyploidization 20 0.14 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 3 12054166 150769419 3 3 72 2 1 0 0 0 0.3 1 5 0 0 5 3 5 7 5 7 7.32 0.7 99.17 0 2 0 Whitelist PRAD-CA 0.62 1 0 0 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 4 NA NA 0 0 72 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 11 5 11 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.25 NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 5 59628461 59648265 2 2 72 0 0 1 1 0 0.57 0.22 1 0 0 NA NA NA 17 9 10 7.32 7.56 89.74 0 1 NA Whitelist PRAD-CA 0.68 0.45 0 0 0.64 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 6 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 7 NA NA 0 0 72 0 0 0 0 0 NA 0.59 NA 0 NA NA NA NA 11 5 11 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 0 NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 8 NA NA 0 0 72 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.11 0 NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 9 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 10 46999321 113799131 5 7 72 1 1 1 2 2 0.9 0.02 12 0 0 12 7 12 14 8 9 7.32 13.35 83.02 0 1 2 Whitelist PRAD-CA 0.96 0.07 0 0 0.92 1 High confidence PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA With other complex events 12 0.08 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 11 NA NA 0 0 72 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.8 NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 12 11809123 130527585 3 9 72 2 0 1 0 6 0.3 0 9 0 0 9 3 7 9 3 7 7.32 0.51 95.75 0 2 0 Whitelist PRAD-CA 0.97 0.01 0 0 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 12 0.08 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 13 45942187 49637065 1 1 72 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 7.32 3.21 82.64 0 1 2 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 15 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 16 14412064 81219757 4 4 72 0 0 2 2 0 0.26 0.13 6 0 0 6 6 6 7 7 7 7.32 14.44 85.54 0 1 2 Whitelist PRAD-CA 0.62 0.32 0 0 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 17 10610210 48531451 2 8 72 0 1 1 0 6 0.57 0 8 0 0 8 8 8 11 11 11 7.32 4.73 95.27 0 1 2 Whitelist PRAD-CA 18 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 18 63401853 72487278 1 4 72 1 0 1 1 1 0.8 0 10 0 0 10 7 10 15 7 15 7.32 5.09 94.9 0 2 1 Whitelist PRAD-CA 17 0.68 0.02 0 0 0.84 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 19 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 20 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 21 39864015 42876362 1 1 72 1 0 0 0 0 0.39 0.22 1 NA NA NA NA NA 4 4 4 7.32 13.96 63.87 0 1 NA Whitelist PRAD-CA 0.62 0.45 NA NA 0.59 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0342 X NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0342 PRAD 0.34 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51116 CPCG0342 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 1 102506837 104677575 3 3 171 1 0 1 1 0 0.8 0.32 3 0 0 NA NA NA NA NA NA 5.88 0.02 99.98 0 2 0 Whitelist PRAD-CA 0.87 0.57 0 0 0.84 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 2 133400546 159262875 48 51 171 12 12 14 10 3 0.88 0 11 0 0 11 3 7 13 3 7 5.88 0.44 99.45 0 2 0 Whitelist PRAD-CA 6 0.95 0 0 0 0.91 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 99 0.29 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 3 71035868 71578773 1 1 171 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 9 5 9 5.88 0.42 99.56 0 1 2 Whitelist PRAD-CA 0.62 0.02 0 NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 4 36250316 164323499 7 15 171 5 6 1 2 1 0.18 0.06 1 0 0 NA NA NA NA NA NA 5.88 0 99.79 0 2 NA Whitelist PRAD-CA 0.62 0.19 0 0 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 29 0.08 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 5 7190467 164958646 5 6 171 3 2 0 0 1 0.14 0.27 11 0 0 11 9 11 11 9 9 5.88 0.2 99.68 0 2 0 Whitelist PRAD-CA 0.62 0.51 0 0 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 11 0.03 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 6 66500721 130649740 3 9 171 1 0 0 2 6 0.3 0.07 7 0 0 7 5 7 10 5 7 5.88 1.36 95.68 0 2 0 Whitelist PRAD-CA 0.68 0.22 0 0 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 12 0.04 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 7 12570105 12591020 1 1 171 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 5.88 0.35 97 0 2 NA Whitelist PRAD-CA 0.62 0.01 NA NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 8 63978022 119026858 11 11 171 6 4 0 1 0 0.04 0 3 0 0 NA NA NA NA NA NA 5.88 0.11 99.88 0 2 0 Whitelist PRAD-CA 0.49 0.01 0 0 0.41 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 22 0.06 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 9 21767143 30321659 1 2 171 1 0 0 1 0 0.57 0.17 1 NA 0 NA NA NA 7 3 5 5.88 0.23 99.1 0 2 NA Whitelist PRAD-CA 0.68 0.38 NA 0 0.64 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 10 54106961 68603382 8 14 171 0 3 2 3 6 0.39 0.02 1 0 0 NA NA NA NA NA NA 5.88 0 99.82 0 2 NA Whitelist PRAD-CA 5 0.81 0.07 0 0 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 22 0.06 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 11 131808391 132667434 1 1 171 0 0 1 0 0 0.39 0.07 1 NA NA NA NA NA 5 5 5 5.88 0.76 95.54 0 2 NA Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 12 18212733 18681802 1 2 171 0 1 0 0 1 0.39 0.2 1 NA NA NA NA NA 5 5 5 5.88 0.23 96.01 0 2 NA Whitelist PRAD-CA 0.68 0.42 NA NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 13 37614144 78907374 3 3 171 0 1 1 1 0 0.8 1 6 0 0 6 6 6 9 7 9 5.88 19.19 66.66 0 1 2 Whitelist PRAD-CA 0.87 1 0 0 0.84 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 14 38593102 38844984 1 1 171 0 1 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 5.88 0 81.29 0 2 NA Whitelist PRAD-CA 0.62 0.16 NA NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 15 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 16 56920983 57502710 1 1 171 0 0 1 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 5.88 0 99.89 0 2 NA Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 17 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 18 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 19 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 20 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 21 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 22 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0344 X 144359028 145805332 2 3 171 0 0 1 1 1 0.57 0.12 1 0 0 NA NA NA NA NA NA 5.88 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.3 0 0 0.64 0 No PRAD-CA CPCG0344 PRAD 0.75 1.92 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51117 CPCG0344 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 1 NA NA 0 0 57 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.32 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 2 132436149 214256393 1 4 57 0 4 0 0 0 0.01 0.14 10 0 0 10 4 7 11 4 4 24.77 1.25 98.64 0 2 3 Whitelist PRAD-CA 0.21 0.34 0 0 0.16 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 8 0.07 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 3 4591854 77484489 1 5 57 1 0 1 0 3 0.57 0.12 3 0 0 NA NA NA NA NA NA 24.77 0.03 99.92 0 2 0 Whitelist PRAD-CA 0.93 0.3 0 0 0.64 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 7 0.06 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 4 NA NA 0 0 57 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.52 0 NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 5 NA NA 0 0 57 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 9 5 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.81 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 6 52652922 52691459 1 1 57 1 0 0 0 0 0.39 0.78 1 0 NA NA NA NA NA NA NA 24.77 0.03 99.73 0 2 NA Whitelist PRAD-CA 0.62 0.93 0 NA 0.59 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 2 0.02 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 7 145632213 146149818 1 2 57 0 2 0 0 0 0.11 0 2 0 0 NA NA NA 22 7 16 24.77 94.22 5.55 0 3 4 Whitelist PRAD-CA 0.54 0 0 0 0.48 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 4 0.04 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 8 NA NA 0 0 57 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 9 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 10 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 11 NA NA 0 0 57 0 0 0 0 0 NA 0.19 NA 0 NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 0 NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 12 98499781 130940199 1 7 57 0 1 1 0 5 0.57 0 5 0 0 5 4 5 9 5 5 24.77 94.74 1.52 0 2 3 Whitelist PRAD-CA 0.77 0 0 0 0.64 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 9 0.08 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 13 31131361 74302695 1 1 57 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.77 37.48 48.36 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 2 0.02 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 14 106716766 106727878 1 1 57 0 1 0 0 0 0.39 0.7 1 NA NA NA NA NA NA NA NA 24.77 0 84.42 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 2 0.02 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 16 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 17 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 18 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 19 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 20 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 22 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 0 0 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0345 X 58087182 58133774 1 1 57 0 1 0 0 0 0.39 0.37 1 NA NA NA NA NA NA NA NA 24.77 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.62 NA NA 0.59 0 No PRAD-CA CPCG0345 PRAD 0.49 2.09 Prost-AdenoCA NA 2 0.02 NA 3 PRAD-CA DO51118 CPCG0345 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 1 244760971 246218809 4 4 51 2 1 0 1 0 0.57 0 1 0 0 NA NA NA 11 5 5 7.86 0.38 99.62 0 2 NA Whitelist PRAD-CA 0.68 0.01 0 0 0.64 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 8 0.08 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 2 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 3 67733963 192470739 1 2 51 2 0 0 0 0 0.11 1 5 0 0 5 3 5 11 3 3 7.86 0.2 99.75 0 2 1 Whitelist PRAD-CA 0.54 1 0 0 0.48 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 4 NA NA 0 0 51 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.5 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 5 NA NA 0 0 51 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 6 42852482 109256613 1 2 51 2 0 0 0 0 0.11 0.13 4 0 0 4 3 4 7 5 7 7.86 0.67 99.19 0 2 0 Whitelist PRAD-CA 0.54 0.32 0 0 0.48 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 7 NA NA 0 0 51 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.92 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 8 42717637 131301155 3 8 51 1 1 0 1 5 0.8 0 3 0 0 NA NA NA 4 4 4 7.86 29.3 70.7 0 2 1 Whitelist PRAD-CA 0.87 0 0 0 0.84 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 11 0.11 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 9 NA NA 0 0 51 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 10 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 11 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA 15 5 6 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 13 25295184 42454163 2 2 51 0 0 1 1 0 0.57 0.7 5 NA 0 5 5 5 9 7 9 7.86 8.47 91.53 0 1 2 Whitelist PRAD-CA 0.68 0.89 NA 0 0.64 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 14 106096402 106727640 1 2 51 1 1 0 0 0 0.57 0.68 1 NA 0 NA NA NA NA NA NA 7.86 0 99.42 0 2 NA Whitelist PRAD-CA 0.68 0.88 NA 0 0.64 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 15 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 16 14321483 79506484 1 9 51 1 2 0 0 6 0.3 0 6 0 0 6 6 6 8 8 8 7.86 30.9 69.09 0 1 2 Whitelist PRAD-CA 0.85 0 0 0 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 12 0.12 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 17 3850046 7100896 1 2 51 0 0 1 0 1 0.39 0.16 3 NA NA NA NA NA 5 5 5 7.86 2.91 97.07 0 1 2 Whitelist PRAD-CA 0.68 0.37 NA NA 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 3 0.03 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 18 41360282 43206448 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.86 0 100 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 19 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 20 23757150 23838741 1 1 51 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 7.86 0 99.04 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 21 39872473 42866626 1 3 51 1 0 0 0 2 0.39 0.02 1 NA 0 NA NA NA NA NA NA 7.86 7.54 70.29 0 2 NA Whitelist PRAD-CA 0.62 0.1 NA 0 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0348 X 32582881 32617608 1 1 51 1 0 0 0 0 0.39 0.74 1 0 NA NA NA NA NA NA NA 7.86 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.91 0 NA 0.59 0 No PRAD-CA CPCG0348 PRAD 0.6 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51120 CPCG0348 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 1 NA NA 0 0 202 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.07 0 NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 2 232788026 235119852 3 4 202 1 0 1 1 1 0.8 0.8 4 0 0 4 4 4 7 5 5 10.8 3.82 96.05 0 1 2 Whitelist PRAD-CA 0.68 0.95 0 0 0.84 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 3 13758756 127053924 4 12 202 2 1 1 0 8 0.57 0.78 9 0 0 9 4 9 12 6 6 10.8 2.67 97.2 0 1 2 Whitelist PRAD-CA 10 0.93 0.94 0 0 0.64 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 16 0.04 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 4 54015688 54040031 1 3 202 0 0 1 1 1 0.57 0.01 1 0 0 NA NA NA NA NA NA 10.8 0.4 97.02 0 2 NA Whitelist PRAD-CA 0.87 0.05 0 0 0.64 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 5 NA NA 0 0 202 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.08 0 NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 6 79787015 79828419 1 2 202 1 0 0 1 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 10.8 0.25 99.51 0 2 NA Whitelist PRAD-CA 0.68 0.13 0 0 0.64 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 7 89975761 155930681 1 3 202 1 2 0 0 0 0.3 0.01 4 0 0 4 4 4 5 5 5 10.8 17.56 82.21 0 2 3 Whitelist PRAD-CA 0.62 0.05 0 0 0.59 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 8 20040649 42029377 8 53 202 0 6 1 1 45 0.01 0 16 0 0 16 14 16 17 14 14 10.8 9.63 90.24 0 1 2 Whitelist PRAD-CA 18 0.46 0 0 0 0.21 1 High confidence PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA Canonical without polyploidization 61 0.15 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 9 140153247 140479948 1 1 202 1 0 0 0 0 0.39 0.2 1 0 NA NA NA NA 4 3 3 10.8 0.43 99.05 0 1 NA Whitelist PRAD-CA 0.62 0.42 0 NA 0.59 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 10 88282525 90643524 5 9 202 2 1 1 1 4 0.9 0 6 0 0 6 6 6 13 13 13 10.8 2 97.8 0 1 2 Whitelist PRAD-CA 0.85 0 0 0 0.92 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 14 0.03 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 11 32402370 134754988 4 45 202 0 0 2 2 41 0.26 0 18 0 0 18 14 18 18 14 14 10.8 28 71.67 2 1 2 Whitelist PRAD-CA 8_18 0.98 0 0 0 0.59 1 High confidence PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA Canonical without polyploidization 49 0.12 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 12 11640309 117390397 1 8 202 3 1 0 0 4 0.11 0.87 9 0 0 9 8 9 10 8 8 10.8 12.62 87.3 0 1 2 Whitelist PRAD-CA 13 0.87 1 0 0 0.48 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 13 69140914 77954397 1 4 202 1 0 0 0 3 0.39 0.33 6 NA 0 6 6 6 7 7 7 10.8 3.85 81.8 0 1 2 Whitelist PRAD-CA 12 0.62 0.59 NA 0 0.59 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 14 77380508 92559252 1 3 202 0 1 0 0 2 0.39 0.15 1 0 0 NA NA NA NA NA NA 10.8 30.17 54.83 0 1 NA Whitelist PRAD-CA 0.62 0.36 0 0 0.59 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 15 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 16 NA NA 0 0 202 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.16 NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 17 NA NA 0 0 202 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 18 4244316 74665300 22 75 202 7 5 5 5 53 0.91 0 19 0 0 19 19 19 20 20 20 10.8 16 83.95 0 2 1 Whitelist PRAD-CA 8 0.78 0 0 0 0.93 1 High confidence PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA Canonical without polyploidization 97 0.24 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 19 NA NA 0 0 202 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.42 NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 20 15272450 16009157 1 1 202 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 10.8 1.17 97.77 0 1 2 Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 21 33072007 42854471 2 6 202 1 0 1 0 4 0.57 0 1 0 0 NA NA NA NA NA NA 10.8 0 77.35 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 22 NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0350 X NA NA 0 0 202 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0350 PRAD 0.74 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51121 CPCG0350 male alive C61 no treatment 52 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 1 155873504 158239868 1 1 41 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 9.92 0.95 98.52 0 1 2 Whitelist PRAD-CA 0.62 0.14 0 NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 2 25983714 193040512 1 6 41 1 1 0 0 4 0.57 0.02 1 0 0 NA NA NA NA NA NA 9.92 0.07 99.84 0 2 NA Whitelist PRAD-CA 0.93 0.08 0 0 0.64 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 8 0.1 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 3 116320577 116708937 1 2 41 1 1 0 0 0 0.57 0.21 1 0 0 NA NA NA NA NA NA 9.92 0 99.81 0 2 NA Whitelist PRAD-CA 0.68 0.43 0 0 0.64 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 4 120966474 140261049 1 2 41 2 0 0 0 0 0.11 1 3 NA 0 NA NA NA NA NA NA 9.92 0.06 99.81 2 2 1 Whitelist PRAD-CA 0.54 1 NA 0 0.48 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 5 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 6 145100349 146061003 1 1 41 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.92 0.56 99.31 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 7 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 8 31013909 46939672 1 4 41 0 1 0 1 2 0.57 0 2 0 0 NA NA NA NA NA NA 9.92 29.32 67.14 0 1 2 Whitelist PRAD-CA 0.54 0.02 0 0 0.64 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 9 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 10 86119075 91254804 1 3 41 2 0 1 0 0 0.3 0.12 7 0 0 7 5 7 7 5 5 9.92 1.53 98.15 0 1 0 Whitelist PRAD-CA 0.62 0.3 0 0 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 11 25123804 91569082 1 2 41 1 0 0 1 0 0.57 0.72 3 NA 0 NA NA NA NA NA NA 9.92 0.34 99.45 0 2 1 Whitelist PRAD-CA 0.68 0.9 NA 0 0.64 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 12 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 13 28540772 96486482 1 3 41 2 1 0 0 0 0.3 0.17 2 0 0 NA NA NA NA NA NA 9.92 59 40.76 0 1 2 Whitelist PRAD-CA 0.62 0.38 0 0 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 14 38321018 39052468 1 1 41 0 1 0 0 0 0.39 1 4 NA NA 4 4 4 6 5 6 9.92 0.55 96.65 0 2 3 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 15 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 16 NA NA 0 0 41 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 0 NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 17 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 18 NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 19 12388415 12770973 1 1 41 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 9.92 0 99.53 0 2 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 20 7968955 8661335 1 1 41 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 9.92 1.1 98.8 0 1 2 Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 21 39826383 42868781 1 3 41 1 0 0 0 2 0.39 0.01 2 NA 0 NA NA NA NA NA NA 9.92 6.32 71.03 0 1 2 Whitelist PRAD-CA 0.62 0.06 NA 0 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 22 39901093 40765067 1 1 41 0 0 0 1 0 0.39 0.39 1 NA NA NA NA NA 4 4 4 9.92 24.24 64.07 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0352 X NA NA 0 0 41 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0352 PRAD 0.62 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51122 CPCG0352 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 1 239496206 240283407 1 1 134 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 14.13 0 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.05 NA NA 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 2 NA NA 0 0 134 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 0 NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 3 60563734 72809930 1 2 134 1 1 0 0 0 0.57 0.01 2 NA 0 NA NA NA NA NA NA 14.13 0.16 99.68 0 2 3 Whitelist PRAD-CA 0.68 0.03 NA 0 0.64 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 4 NA NA 0 0 134 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 5 71158322 72797248 2 2 134 0 0 1 1 0 0.57 0.02 3 NA 0 NA NA NA NA NA NA 14.13 0.15 99.7 0 2 1 Whitelist PRAD-CA 0.68 0.08 NA 0 0.64 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 6 63080680 160103154 1 9 134 2 1 0 0 6 0.3 0.1 1 0 0 NA NA NA NA NA NA 14.13 4.88 94.88 0 2 NA Whitelist PRAD-CA 0.97 0.26 0 0 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 7 NA NA 0 0 134 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.05 NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 8 3876666 3887426 2 2 134 0 0 1 1 0 0.57 0.84 1 0 0 NA NA NA 4 3 3 14.13 67.15 29.3 0 2 NA Whitelist PRAD-CA 0.68 0.98 0 0 0.64 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 9 2803173 3840022 1 10 134 0 0 2 0 8 0.11 0 5 0 0 5 3 5 8 3 4 14.13 0.79 96.8 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.48 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 10 33470244 114203332 1 7 134 1 1 0 1 4 0.8 0.68 1 0 0 NA NA NA NA NA NA 14.13 10.18 89.49 0 2 NA Whitelist PRAD-CA 0.96 0.88 0 0 0.84 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 11 1843210 2179170 1 1 134 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 14.13 18.45 81.4 0 2 NA Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 12 28582794 28705323 2 3 134 0 1 0 1 1 0.57 0 2 0 0 NA NA NA 11 11 11 14.13 1.5 98.42 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.64 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 13 19406366 24611632 14 15 134 2 5 4 3 1 0.7 0 6 0 0 6 0 3 8 4 4 14.13 5.49 80.35 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.78 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 29 0.11 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 14 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 15 57187533 57343214 1 1 134 1 0 0 0 0 0.39 0.28 1 0 NA NA NA NA NA NA NA 14.13 0 99.89 0 2 NA Whitelist PRAD-CA 0.62 0.52 0 NA 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 16 NA NA 0 0 134 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 17 39065930 39123769 2 3 134 0 1 1 0 1 0.57 0 4 0 0 4 4 4 10 9 10 14.13 17.98 82.02 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.64 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 18 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 19 NA NA 0 0 134 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 20 34891837 35094675 5 8 134 1 1 2 1 3 0.9 0 4 0 0 4 3 4 14 6 12 14.13 7.93 91.93 0 2 0 Whitelist PRAD-CA 0.68 0 0 0 0.92 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 21 30837812 42870443 2 22 134 2 0 2 0 18 0.26 0 8 0 0 8 3 8 8 3 3 14.13 11.3 66.05 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 26 0.1 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 22 NA NA 0 0 134 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0353 X 43013012 46101092 1 1 134 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 14.13 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 0 No PRAD-CA CPCG0353 PRAD 0.7 1.95 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578389_A_G,CN:0 2 PRAD-CA DO51123 CPCG0353 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 1 NA NA 0 0 113 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.54 0 NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 2 205161794 235901186 1 4 113 1 0 0 0 3 0.39 0.06 1 NA 0 NA NA NA NA NA NA 5.57 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.19 NA 0 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 3 72001115 73147568 1 1 113 1 0 0 0 0 0.39 0.36 2 0.44 NA NA NA NA 5 3 5 5.57 0.64 99.27 0 1 2 Whitelist PRAD-CA 0.62 0.61 0.44 NA 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 4 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 5 58959306 162751648 1 7 113 1 0 2 0 4 0.3 0.03 3 0 0 NA NA NA 5 5 5 5.57 0.65 99.21 0 2 1 Whitelist PRAD-CA 17 0.62 0.11 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA With other complex events 10 0.04 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 6 61917755 152506280 1 8 113 2 0 0 1 5 0.3 0.23 3 0 0 NA NA NA NA NA NA 5.57 1.04 98.81 0 2 1 Whitelist PRAD-CA 17 0.68 0.46 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA With other complex events 11 0.05 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 7 28890657 112267156 2 5 113 0 0 2 2 1 0.26 0.21 1 0 0 NA NA NA NA NA NA 5.57 0 99.77 0 2 NA Whitelist PRAD-CA 0.68 0.44 0 0 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 9 0.04 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 8 1954596 29212509 1 3 113 1 0 0 0 2 0.39 0.83 1 0.01 0.01 NA NA NA NA NA NA 5.57 0 100 0 2 NA Whitelist PRAD-CA 0.87 0.97 0.01 0.01 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 9 2951456 6092633 1 4 113 1 1 0 0 2 0.57 0.01 1 0.03 0 NA NA NA NA NA NA 5.57 0 99.29 0 2 NA Whitelist PRAD-CA 0.54 0.06 0.03 0 0.64 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 10 77178922 90677494 3 5 113 2 0 0 1 2 0.3 0.65 1 0 0 NA NA NA NA NA NA 5.57 0 99.8 0 2 NA Whitelist PRAD-CA 16 0.62 0.86 0 0 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 11 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 12 12779174 126256048 9 18 113 3 2 2 2 9 0.95 0 19 0 0 19 19 19 21 21 21 5.57 1.33 98.59 0 1 2 Whitelist PRAD-CA 16 0.68 0 0 0 0.97 1 High confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA Canonical without polyploidization 27 0.12 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 13 21051756 22050199 1 1 113 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 5.57 0 99.85 0 2 NA Whitelist PRAD-CA 0.62 0.41 NA NA 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 14 91317728 92942310 1 1 113 1 0 0 0 0 0.39 0.59 1 NA NA NA NA NA NA NA NA 5.57 0 99.09 0 2 NA Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 15 27240116 42918274 1 3 113 3 0 0 0 0 0.03 1 1 0 0 NA NA NA NA NA NA 5.57 0 99.9 0 2 NA Whitelist PRAD-CA 0.41 1 0 0 0.33 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 16 29187104 85721631 2 10 113 0 0 2 0 8 0.11 0 7 0 0 7 7 7 7 7 7 5.57 2.81 97.08 0 2 1 Whitelist PRAD-CA 12 0.62 0 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 17 6755315 80126854 7 20 113 5 1 1 0 13 0.04 0 8 0 0 8 8 8 9 9 9 5.57 8.89 91.11 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.38 1 High confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA Canonical without polyploidization 27 0.12 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 18 46943835 75024605 1 7 113 4 0 0 1 2 0.04 0.03 1 0 0 NA NA NA NA NA NA 5.57 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.12 0 0 0.36 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 19 NA NA 0 0 113 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 20 NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 21 39867093 42868050 1 4 113 1 0 0 1 2 0.57 0.01 1 0 0 NA NA NA NA NA NA 5.57 0 77.35 0 2 NA Whitelist PRAD-CA 17 1 0.06 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA With other complex events 6 0.03 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 22 29995005 48760749 7 9 113 2 1 2 2 2 0.93 0 3 0 0 NA NA NA NA NA NA 5.57 0.03 99.97 0 2 1 Whitelist PRAD-CA 0.85 0 0 0 0.95 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 16 0.07 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0354 X NA NA 0 0 113 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0354 PRAD 0.97 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51124 CPCG0354 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 1 205877648 235076331 2 2 42 1 0 1 0 0 0.57 0.14 4 0 0 4 4 4 7 7 7 8.9 0.48 99.18 0 1 2 Whitelist PRAD-CA 0.68 0.34 0 0 0.64 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 2 NA NA 0 0 42 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.8 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 3 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 4 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 5 75560149 79185814 1 2 42 0 0 0 1 1 0.39 0.33 1 NA NA NA NA NA NA NA NA 8.9 13.74 83.61 0 2 NA Whitelist PRAD-CA 0.68 0.59 NA NA 0.59 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 3 0.04 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 6 16443206 24891779 1 3 42 0 0 2 1 0 0.3 0.32 3 0 0 NA NA NA NA NA NA 8.9 0.05 99.72 0 2 1 Whitelist PRAD-CA 0.62 0.57 0 0 0.59 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 7 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 8 113314544 113334445 1 1 42 0 0 0 1 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 8.9 29.16 67.14 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 9 NA NA 0 0 42 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.88 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 10 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 11 90658929 94194723 3 3 42 1 0 1 1 0 0.8 0.04 1 0 0 NA NA NA NA NA NA 8.9 0.03 99.83 0 2 NA Whitelist PRAD-CA 0.87 0.15 0 0 0.84 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 6 0.07 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 12 57733926 57792112 1 1 42 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 8.9 2.67 97.24 0 1 2 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 13 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 14 NA NA 0 0 42 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.14 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 15 NA NA 0 0 42 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 16 NA NA 0 0 42 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.56 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 17 NA NA 0 0 42 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.57 NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 18 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 19 14507315 14877579 1 1 42 0 0 1 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 8.9 0.99 98.84 0 2 NA Whitelist PRAD-CA 0.62 0.04 NA NA 0.59 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 20 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 21 39831524 42878627 1 6 42 1 0 0 1 4 0.57 0 1 0 0 NA NA NA NA NA NA 8.9 0 77.35 0 2 NA Whitelist PRAD-CA 1 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 8 0.1 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 22 23647359 49864049 5 7 42 1 1 1 2 2 0.9 0 9 0 0 9 4 6 11 5 6 8.9 38.22 50.67 0 1 2 Whitelist PRAD-CA 0.96 0 0 0 0.92 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 12 0.14 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0356 X NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0356 PRAD 0.56 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51126 CPCG0356 male alive C61 no treatment 51 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 1 234433222 235613195 33 71 162 11 11 7 4 38 0.24 0 13 0 0 13 4 8 18 5 8 6.64 0.49 98.99 0 1 2 Whitelist PRAD-CA 11 0.62 0 0 0 0.59 0 Low confidence PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA With other complex events 104 0.32 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 2 NA NA 0 0 162 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.02 NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 3 72080263 176879264 1 2 162 1 1 0 0 0 0.57 0 4 NA 0 4 3 4 5 3 3 6.64 1.3 98.54 0 2 1 Whitelist PRAD-CA 0.68 0.01 NA 0 0.64 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 4 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 5 163580020 163604076 1 1 162 0 0 0 1 0 0.39 0 1 NA NA NA NA NA NA NA NA 6.64 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 6 NA NA 0 0 162 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 7 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 8 101570450 103238032 1 4 162 1 1 0 0 2 0.57 0.15 2 0 0 NA NA NA NA NA NA 6.64 1.13 98.76 0 1 2 Whitelist PRAD-CA 0.68 0.35 0 0 0.64 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 9 118356142 122167907 3 9 162 0 2 0 1 6 0.3 0 8 0 0 8 3 6 12 4 4 6.64 4.39 95.48 0 3 1 Whitelist PRAD-CA 0.97 0 0 0 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 12 0.04 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 10 88852129 101115640 4 4 162 2 0 0 2 0 0.26 0.57 4 0 0 4 4 4 7 5 5 6.64 25.63 74.03 0 0 1 Whitelist PRAD-CA 0.62 0.79 0 0 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 11 33186637 34681926 15 44 162 4 3 5 3 29 0.87 0 7 0 0 7 4 5 9 5 7 6.64 0.73 99.11 0 0 1 Whitelist PRAD-CA 0.64 0 0 0 0.9 0 Low confidence PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA With other complex events 59 0.18 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 12 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 13 26050316 26807113 1 1 162 0 1 0 0 0 0.39 0.67 3 0 0 NA NA NA 5 4 5 6.64 78.99 6.7 0 2 1 Whitelist PRAD-CA 0.62 0.87 0 0 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 14 NA NA 0 0 162 0 0 0 0 0 NA 0.65 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.86 0 NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 15 81795070 82242207 1 1 162 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 6.64 0.44 84.01 0 1 2 Whitelist PRAD-CA 0.62 0.59 NA NA 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 16 52445168 52589267 1 1 162 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 6.64 22.14 77.48 0 2 NA Whitelist PRAD-CA 0.62 0.7 NA NA 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 17 6505728 7589625 1 4 162 0 1 0 0 3 0.39 0.01 4 0 0 4 0 3 6 3 5 6.64 23.36 72.19 0 2 0 Whitelist PRAD-CA 1 0.06 0 0 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 18 NA NA 0 0 162 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.33 NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 19 34945203 41976571 1 2 162 0 0 0 1 1 0.39 0 1 0 NA NA NA NA 4 3 4 6.64 0.29 92.45 0 2 NA Whitelist PRAD-CA 0.68 0 0 NA 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 20 NA NA 0 0 162 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 21 34002266 42878086 3 6 162 2 1 0 0 3 0.3 0.02 3 0 0 NA NA NA NA NA NA 6.64 1.19 76.16 0 2 4 Whitelist PRAD-CA 0.93 0.07 0 0 0.59 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 9 0.03 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 22 31895030 44316804 3 10 162 1 1 1 0 7 0.8 0 6 0 0 6 5 6 7 5 5 6.64 7.32 68.9 0 2 4 Whitelist PRAD-CA 0.96 0 0 0 0.84 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 13 0.04 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0357 X NA NA 0 0 162 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.35 NA NA NA 0 No PRAD-CA CPCG0357 PRAD 0.55 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51127 CPCG0357 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 3 160659294 160896293 1 1 9 1 0 0 0 0 0.39 0.48 2 NA NA NA NA NA 4 3 3 16.69 0.17 99.7 0 1 2 Whitelist PRAD-CA 0.62 0.72 NA NA 0.59 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 2 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 11 28863784 49164867 1 1 9 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 16.69 15.04 84.81 0 1 2 Whitelist PRAD-CA 0.62 0.6 NA NA 0.59 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 2 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 12 115099844 117122349 1 1 9 0 0 1 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 16.69 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 0 0 NA 0.59 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 2 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 13 96814026 97344970 1 1 9 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 3 16.69 85.26 0.46 0 1 2 Whitelist PRAD-CA 0.62 0.51 NA NA 0.59 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 2 0.11 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 18 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.45 NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 21 39838040 42874733 1 3 9 1 0 0 0 2 0.39 0 2 NA 0 NA NA NA NA NA NA 16.69 6.31 71.04 0 1 2 Whitelist PRAD-CA 0.87 0 NA 0 0.59 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 4 0.22 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0358 X NA NA 0 0 9 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.62 NA NA NA 0 No PRAD-CA CPCG0358 PRAD 0.29 1.82 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 PRAD-CA DO51128 CPCG0358 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 1 170656359 188208384 4 4 171 0 0 2 2 0 0.26 1 8 0 0 8 8 8 19 19 19 14.86 16.1 83.58 0 1 2 Whitelist PRAD-CA 0.62 1 0 0 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 2 146919033 148848088 8 8 171 2 3 2 1 0 0.8 0 11 0 0 11 4 6 23 8 8 14.86 12.02 87.87 0 1 2 Whitelist PRAD-CA 0.87 0.01 0 0 0.84 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 16 0.05 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 3 93736271 102539963 1 1 171 0 0 0 1 0 0.39 0 1 NA NA NA NA NA NA NA NA 14.86 0 99.87 0 2 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 4 57981759 63188151 9 9 171 3 2 2 2 0 0.95 0 5 0 0 5 5 5 9 9 9 14.86 2.21 97.66 0 2 1 Whitelist PRAD-CA 0.97 0.02 0 0 0.97 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 18 0.05 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 5 21565017 137334776 1 2 171 1 1 0 0 0 0.57 0.01 3 0.03 0.01 NA NA NA NA NA NA 14.86 29.68 70.21 0 2 1 Whitelist PRAD-CA 0.68 0.05 0.03 0.01 0.64 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 6 162405842 162640163 1 1 171 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 14.86 39.72 60.05 0 2 3 Whitelist PRAD-CA 0.62 0.02 NA NA 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 7 19159464 158789047 1 3 171 2 1 0 0 0 0.3 0.09 3 0 0 NA NA NA 4 3 3 14.86 1.52 98.22 0 1 2 Whitelist PRAD-CA 0.62 0.25 0 0 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 8 57596641 79994420 8 8 171 3 0 3 2 0 0.39 0.38 5 0 0 5 3 3 10 3 3 14.86 28.95 70.92 0 1 0 Whitelist PRAD-CA 0.62 0.63 0 0 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 16 0.05 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 9 9395125 29136352 1 2 171 2 0 0 0 0 0.11 0.07 2 NA 0 NA NA NA 4 4 4 14.86 0.66 99.16 0 1 2 Whitelist PRAD-CA 0.54 0.21 NA 0 0.48 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 10 NA NA 0 0 171 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.1 NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 11 123471455 123544163 2 2 171 0 0 1 1 0 0.57 0.36 3 0 0 NA NA NA 4 0 3 14.86 0.05 99.8 0 0 1 Whitelist PRAD-CA 0.68 0.62 0 0 0.64 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 12 11938733 90103272 49 49 171 13 9 13 14 0 0.75 0 30 0 0 30 8 14 31 8 8 14.86 5 91.26 0 2 1 Whitelist PRAD-CA 0.86 0 0 0 0.83 1 High confidence PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA With other complex events 98 0.29 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 13 99948776 102787654 5 5 171 1 0 2 2 0 0.53 0.53 8 0 0 8 5 8 11 5 11 14.86 0.43 85.41 0 2 0 Whitelist PRAD-CA 0.68 0.76 0 0 0.64 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 14 37573464 80784910 1 3 171 1 2 0 0 0 0.3 0.38 4 0 0 4 4 4 5 5 5 14.86 2.7 82.3 0 2 3 Whitelist PRAD-CA 0.62 0.63 0 0 0.59 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 15 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 16 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 17 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 18 22917350 71721271 4 4 171 1 1 1 1 0 1 0.81 8 0 0 8 8 8 9 9 9 14.86 59.92 40.05 0 1 2 Whitelist PRAD-CA 1 0.96 0 0 1 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 19 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 20 14311417 15045909 2 2 171 2 0 0 0 0 0.11 0.59 2 NA 0 NA NA NA 5 5 5 14.86 1.48 92.31 0 1 2 Whitelist PRAD-CA 0.54 0.81 NA 0 0.48 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 21 NA NA 0 0 171 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 22 NA NA 0 0 171 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0360 X 126161900 128767438 3 4 171 0 1 1 1 1 0.8 1 1 0 0 NA NA NA NA NA NA 14.86 100 0 0 1 NA Whitelist PRAD-CA 1 1 0 0 0.84 1 No PRAD-CA CPCG0360 PRAD 0.25 1.86 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-CA DO51129 CPCG0360 male alive C61 no treatment 65 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 1 NA NA 0 0 48 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.4 NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 2 5973414 186052259 1 5 48 1 1 0 0 3 0.57 0.6 7 0 0 7 3 3 7 3 3 6.53 5.86 94.05 0 2 1 Whitelist PRAD-CA 13 0.68 0.81 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA With other complex events 7 0.07 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 3 121396411 169426454 11 11 48 1 4 4 2 0 0.48 0 1 0 0 NA NA NA NA NA NA 6.53 0.15 99.75 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 22 0.23 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 4 109135241 129348689 1 2 48 2 0 0 0 0 0.11 0.77 1 NA 0 NA NA NA NA NA NA 6.53 0 99.79 0 2 NA Whitelist PRAD-CA 0.54 0.93 NA 0 0.48 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 5 66419135 143752748 1 3 48 1 0 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 6.53 0 99.84 0 2 NA Whitelist PRAD-CA 0.87 1 0 0 0.84 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 6 0.06 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 6 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 7 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 8 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 9 81261500 112106768 1 1 48 0 0 0 1 0 0.39 0.71 1 NA NA NA NA NA NA NA NA 6.53 0 99.84 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 10 14699628 14805258 1 1 48 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 4 6.53 0.21 99.58 0 2 4 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 11 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 12 84322532 85140397 1 1 48 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 6.53 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 13 20078680 98039016 5 8 48 3 0 1 1 3 0.28 0 9 0 0 9 8 9 10 8 10 6.53 13.2 86.61 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA Canonical without polyploidization 13 0.14 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 15 57284751 83985025 2 2 48 0 1 0 1 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 6.53 0 99.89 0 2 NA Whitelist PRAD-CA 0.68 0.15 0 0 0.64 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 16 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 17 4882885 57692860 1 2 48 2 0 0 0 0 0.11 0.37 4 NA 0.03 4 4 4 5 5 5 6.53 9.44 90.56 0 1 2 Whitelist PRAD-CA 0.54 0.63 NA 0.03 0.48 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 18 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 19 18407408 53974085 1 2 48 2 0 0 0 0 0.11 0.24 1 NA 0 NA NA NA NA NA NA 6.53 14.72 85.11 0 2 NA Whitelist PRAD-CA 0.54 0.48 NA 0 0.48 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 21 39832668 42878583 1 1 48 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 6.53 6.33 71.02 0 1 2 Whitelist PRAD-CA 0.62 0.3 NA NA 0.59 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0362 X 48057909 134734793 1 2 48 0 1 1 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 6.53 100 0 0 1 NA Whitelist PRAD-CA 0.68 1 NA 0 0.64 1 No PRAD-CA CPCG0362 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51131 CPCG0362 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 1 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 2 22958509 199840166 6 7 35 1 2 2 1 1 0.88 0 5 0 0 5 3 5 6 3 6 9.34 7.06 90.25 0 2 3 Whitelist PRAD-CA 0.96 0 0 0 0.91 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 13 0.19 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 3 70458563 157235513 15 15 35 3 8 2 2 0 0.09 0 9 0 0 9 3 5 9 3 5 9.34 0.41 99.54 0 2 4 Whitelist PRAD-CA 0.54 0 0 0 0.48 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 30 0.43 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 4 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 5 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 6 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 7 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 8 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 9 20669013 103693761 3 6 35 0 1 2 0 3 0.3 0 11 0 0 11 3 3 12 4 6 9.34 25.78 74.09 0 2 0 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 9 0.13 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 13 41255094 78344669 1 1 35 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.34 2.78 82.85 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 14 NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 15 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 16 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 17 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 18 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 19 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 20 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 22 NA NA 0 0 35 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.59 NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0363 X NA NA 0 0 35 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0363 PRAD 0.28 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51132 CPCG0363 male alive C61 no treatment 56 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 1 155278002 201940134 2 2 78 0 0 1 1 0 0.57 0.83 4 0 0 4 3 4 11 7 11 7.21 15.33 84.67 0 2 0 Whitelist PRAD-CA 0.68 0.97 0 0 0.64 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 2 217001483 217218003 1 1 78 0 0 0 1 0 0.39 0.22 1 NA NA NA NA NA 15 5 9 7.21 0.12 99.77 0 2 NA Whitelist PRAD-CA 0.62 0.45 NA NA 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 3 NA NA 0 0 78 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 12 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.09 0 NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 4 40146550 96108208 1 13 78 2 0 0 1 10 0.3 0 11 0 0 11 5 7 17 5 7 7.21 1.41 98.57 0 2 0 Whitelist PRAD-CA 6_21 0.68 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA With other complex events 16 0.1 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 5 29525 222050 1 1 78 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA 17 6 7 7.21 0.41 96.93 0 1 2 Whitelist PRAD-CA 0.62 0.48 NA NA 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 6 1360399 168764390 18 31 78 3 7 4 4 13 0.57 0 38 0 0 38 14 14 40 15 15 7.21 8.31 91.54 0 2 1 Whitelist PRAD-CA 4 0.9 0 0 0 0.64 1 High confidence PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA With other complex events 49 0.31 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 7 NA NA 0 0 78 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 7 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.95 NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 8 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 9 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 10 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 11 NA NA 0 0 78 0 0 0 0 0 NA 1 NA NA NA NA NA NA 10 6 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 12 3253353 4237543 1 1 78 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 15 5 8 7.21 1.05 95.21 0 1 2 Whitelist PRAD-CA 0.62 0.81 NA NA 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 13 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 14 68200945 78058426 1 7 78 0 0 0 1 6 0.39 0 5 0 0 5 5 5 9 5 9 7.21 2.82 96.27 0 2 1 Whitelist PRAD-CA 0.96 0.02 0 0 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 15 40509283 40794014 1 1 78 0 0 1 0 0 0.39 1 2 NA NA NA NA NA 5 3 5 7.21 0.29 99.71 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 16 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 17 63722784 63985074 2 2 78 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 7.21 0.89 99.09 0 2 NA Whitelist PRAD-CA 0.68 0.08 0 0 0.64 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 18 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 19 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 20 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 21 39882385 42869082 2 7 78 0 1 0 1 5 0.57 0 7 0 0 7 7 7 10 9 10 7.21 0.09 70.35 0 2 1 Whitelist PRAD-CA 4 0.96 0 0 0 0.64 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 22 46409667 48853990 1 3 78 1 0 0 0 2 0.39 0.01 1 NA 0 NA NA NA NA NA NA 7.21 0 100 0 2 NA Whitelist PRAD-CA 0.41 0.06 NA 0 0.59 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0364 X NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0364 PRAD 0.63 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51133 CPCG0364 male alive C61 no treatment 62 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 1 1246360 1555742 1 1 53 0 0 0 1 0 0.39 0.61 1 0.08 NA NA NA NA NA NA NA 5.11 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.82 0.08 NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 2 NA NA 0 0 53 0 0 0 0 0 NA 0.8 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.95 0 NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 3 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 4 NA NA 0 0 53 0 0 0 0 0 NA 0.78 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.94 0 NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 5 NA NA 0 0 53 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 6 6007325 10445991 1 1 53 1 0 0 0 0 0.39 0.25 2 0 NA NA NA NA 5 3 5 5.11 2.61 97.15 0 1 2 Whitelist PRAD-CA 0.62 0.49 0 NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 7 57965287 57976271 1 1 53 0 0 1 0 0 0.39 0.76 2 0 NA NA NA NA 5 3 5 5.11 0.19 97.33 0 1 2 Whitelist PRAD-CA 0.62 0.93 0 NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 8 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 9 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 10 51812300 51861732 1 1 53 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.11 0 99.93 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 11 NA NA 0 0 53 0 0 0 0 0 NA 0.74 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 0 NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 12 111620117 124871691 1 2 53 0 0 0 1 1 0.39 0.31 1 0 NA NA NA NA NA NA NA 5.11 0 99.92 0 2 NA Whitelist PRAD-CA 0.54 0.57 0 NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 3 0.03 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 13 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 14 22070211 106727839 1 2 53 0 2 0 0 0 0.11 0.23 1 0.02 0 NA NA NA NA NA NA 5.11 0 99.42 0 2 NA Whitelist PRAD-CA 0.54 0.47 0.02 0 0.48 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 15 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 16 17911763 89760866 3 8 53 0 0 1 2 5 0.3 0 1 0 0 NA NA NA NA NA NA 5.11 0 99.23 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 11 0.1 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 17 NA NA 0 0 53 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 0 NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 18 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 19 53599984 53629775 1 1 53 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 5.11 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0 0 NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 20 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0365 X 139088619 139309412 1 1 53 0 0 0 1 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 5.11 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 0 No PRAD-CA CPCG0365 PRAD 1 1.93 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51134 CPCG0365 male alive C61 no treatment 71 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 1 150909043 205693972 3 12 213 1 1 0 1 9 0.8 0.37 7 0 0 7 7 7 17 7 8 3.46 1.63 95.41 0 2 0 Whitelist PRAD-CA 6_13 0.62 0.62 0 0 0.84 1 High confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA Canonical without polyploidization 15 0.04 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 2 22493101 230456464 62 117 213 12 16 16 18 55 0.75 0 44 0 0 44 7 8 44 7 7 3.46 0.85 99.04 0 2 0 Whitelist PRAD-CA 6 0.62 0 0 0 0.83 1 High confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA With other complex events 179 0.42 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 3 24809384 25029522 1 7 213 1 0 0 0 6 0.39 0 7 0 0 7 3 4 23 5 5 3.46 0.27 99.59 0 0 2 Whitelist PRAD-CA 2 0.77 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA With other complex events 8 0.02 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 4 NA NA 0 0 213 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 5 76350793 77565199 2 4 213 1 1 0 0 2 0.57 0.03 1 0 0 NA NA NA 5 3 5 3.46 0.28 99.6 0 2 NA Whitelist PRAD-CA 1 0.12 0 0 0.64 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 6 167735883 169038473 1 4 213 1 0 1 0 2 0.57 0 4 0 0 4 4 4 9 5 7 3.46 0.01 99.71 0 2 3 Whitelist PRAD-CA 13 0.68 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA Canonical without polyploidization 6 0.01 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 7 29672654 29785499 1 1 213 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 7 5 5 3.46 0.24 97.3 0 2 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 8 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 9 71156555 74899370 1 1 213 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 3.46 0 99.93 0 2 NA Whitelist PRAD-CA 0.62 0.21 NA NA 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 10 6017897 98484684 1 4 213 0 1 1 0 2 0.57 0.14 3 0.09 0.09 NA NA NA 4 4 4 3.46 4.5 95.33 0 2 1 Whitelist PRAD-CA 1 1 0.33 0.09 0.09 0.64 1 Linked to high confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA With other complex events 6 0.01 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 11 32331394 134028693 1 23 213 0 0 1 2 20 0.3 0 9 0 0 9 7 9 9 7 7 3.46 0.97 95.09 0 2 0 Whitelist PRAD-CA 2_6 0.86 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA Canonical without polyploidization 26 0.06 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 12 30429720 32888317 2 2 213 0 0 1 1 0 0.57 0.02 3 0 0 NA NA NA 5 3 3 3.46 0.89 95.37 0 2 3 Whitelist PRAD-CA 0.68 0.08 0 0 0.64 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 13 20995521 107382176 25 33 213 6 7 5 7 8 0.93 0 11 0 0 11 5 5 11 5 5 3.46 0.1 85.75 0 2 4 Whitelist PRAD-CA 1_6 0.78 0 0 0 0.95 1 Linked to high confidence PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA With other complex events 58 0.14 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 14 82580514 83555450 1 4 213 1 0 0 2 1 0.3 0.84 3 0 0 NA NA NA 4 3 4 3.46 2.94 82.06 0 2 0 Whitelist PRAD-CA 0.68 0.98 0 0 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 15 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 16 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 17 15965861 16281646 1 1 213 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 3.46 0 100 0 2 NA Whitelist PRAD-CA 0.62 0.64 NA NA 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 18 638091 653539 1 1 213 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 8 3 3 3.46 5.25 90.11 0 2 NA Whitelist PRAD-CA 0.62 1 0 NA 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 19 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 20 30843300 37345766 1 1 213 1 0 0 0 0 0.39 0.64 3 NA NA NA NA NA 8 6 6 3.46 59.07 40.76 0 2 1 Whitelist PRAD-CA 0.62 0.85 NA NA 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 21 39866805 42866722 1 4 213 1 0 0 0 3 0.39 0.19 1 0 0 NA NA NA NA NA NA 3.46 7.06 70.29 0 2 NA Whitelist PRAD-CA 0.68 0.42 0 0 0.59 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 22 NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0366 X NA NA 0 0 213 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0366 PRAD 0.55 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51135 CPCG0366 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 1 NA NA 0 0 14 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 2 77008771 77023384 1 1 14 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.95 0 99.9 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 3 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 5 NA NA 0 0 14 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.45 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 6 29684214 103722704 1 2 14 0 2 0 0 0 0.11 0.05 1 0 0 NA NA NA NA NA NA 4.95 0 99.86 0 2 NA Whitelist PRAD-CA 0.54 0.16 0 0 0.48 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 4 0.14 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 7 NA NA 0 0 14 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.77 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 9 41970395 43656986 1 1 14 0 0 1 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 4.95 0 96.92 0 2 NA Whitelist PRAD-CA 0.62 0.68 NA NA 0.59 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 13 NA NA 0 0 14 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 14 NA NA 0 0 14 0 0 0 0 0 NA 0.36 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.61 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 17 NA NA 0 0 14 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.17 NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 19 53599615 53629760 1 1 14 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 4.95 0 99.82 0 2 NA Whitelist PRAD-CA 0.62 0.48 NA NA 0.59 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 20 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 22 25684240 25980528 1 1 14 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 4.95 0 76.22 0 2 NA Whitelist PRAD-CA 0.62 0.36 NA NA 0.59 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0368 X NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0368 PRAD 0.16 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51136 CPCG0368 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 1 57908858 60006619 1 1 131 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 14.4 0 100 0 2 NA Whitelist PRAD-CA 0.62 0 NA NA 0.59 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 2 40151681 74346362 2 4 131 1 0 0 1 2 0.57 0.27 5 0 0 5 5 5 7 7 7 14.4 0.12 99.79 0 2 1 Whitelist PRAD-CA 0.68 0.51 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 3 11436862 164866583 1 12 131 2 1 1 2 6 0.88 0.23 11 0 0 11 11 11 11 11 11 14.4 1.93 98.04 0 2 1 Whitelist PRAD-CA 12_6 0.93 0.46 0 0 0.91 1 Linked to high confidence PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA Canonical without polyploidization 18 0.07 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 4 3251859 44731644 3 4 131 1 1 1 0 1 0.8 0.29 2 0 0 NA NA NA NA NA NA 14.4 2.02 97.97 0 2 3 Whitelist PRAD-CA 0.68 0.53 0 0 0.84 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 5 125496449 125620711 1 2 131 0 2 0 0 0 0.11 0.15 1 NA 0 NA NA NA NA NA NA 14.4 0 99.88 0 2 NA Whitelist PRAD-CA 0.54 0.35 NA 0 0.48 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 6 128987682 166522109 11 11 131 3 2 3 3 0 0.97 0 12 0 0 12 9 12 24 12 12 14.4 30.75 69.09 0 2 1 Whitelist PRAD-CA 0.98 0 0 0 0.98 1 High confidence PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA Canonical without polyploidization 22 0.08 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 7 22270609 22894624 2 2 131 1 0 1 0 0 0.57 0.43 3 0 0 NA NA NA NA NA NA 14.4 0.39 99.38 0 2 1 Whitelist PRAD-CA 0.68 0.68 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 8 41859537 143892153 1 3 131 1 1 0 1 0 0.8 0.32 6 0 0 6 3 3 8 3 3 14.4 63.23 36.76 0 2 3 Whitelist PRAD-CA 0.87 0.57 0 0 0.84 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 9 95868006 129091528 2 3 131 1 1 0 0 1 0.57 0.11 1 0 0 NA NA NA NA NA NA 14.4 0.27 99.03 0 2 NA Whitelist PRAD-CA 0.62 0.28 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 10 12993895 56153574 1 2 131 0 1 1 0 0 0.57 0.29 1 0 0 NA NA NA NA NA NA 14.4 0 99.82 0 2 NA Whitelist PRAD-CA 0.68 0.54 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 11 129576048 129634383 1 1 131 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 14.4 0.33 99.24 0 2 NA Whitelist PRAD-CA 0.62 1 0 NA 0.59 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 12 96856747 131373029 2 8 131 0 1 1 2 4 0.57 0.01 7 0 0 7 7 7 12 9 9 14.4 28.39 67.87 0 2 1 Whitelist PRAD-CA 21 0.87 0.03 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 13 NA NA 0 0 131 0 0 0 0 0 NA 0.46 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.71 0 NA NA 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 14 85896563 85987829 1 1 131 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 14.4 0.09 99 0 1 2 Whitelist PRAD-CA 0.62 0.42 NA NA 0.59 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 15 NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 16 50478182 81972487 1 2 131 1 0 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 14.4 57.28 37.75 0 1 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 17 6734833 72465518 1 4 131 3 1 0 0 0 0.11 0.17 6 0.01 0 6 4 6 8 6 6 14.4 2.9 97.08 0 2 1 Whitelist PRAD-CA 0.54 0.39 0.01 0 0.48 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 18 64594459 64646463 1 1 131 1 0 0 0 0 0.39 0.17 1 0 NA NA NA NA NA NA NA 14.4 27.71 72.26 0 1 NA Whitelist PRAD-CA 0.62 0.38 0 NA 0.59 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 19 16188666 17266832 1 1 131 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA NA NA NA 14.4 1.82 98 0 1 2 Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 20 7174834 7193213 2 2 131 1 1 0 0 0 0.57 0.02 1 0 0 NA NA NA NA NA NA 14.4 1.2 97.83 0 2 NA Whitelist PRAD-CA 0.68 0.09 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 21 39857155 42874789 1 7 131 1 0 1 0 5 0.57 0 5 0 0 5 5 5 5 5 5 14.4 0.89 76.47 0 2 1 Whitelist PRAD-CA 2 0.77 0 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 22 17595256 43567158 2 5 131 1 0 1 2 1 0.57 0 6 0 0 6 6 6 6 6 6 14.4 49.79 50.21 0 2 3 Whitelist PRAD-CA 0.62 0.03 0 0 0.64 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0369 X NA NA 0 0 131 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0369 PRAD 0.52 1.89 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 3 PRAD-CA DO51137 CPCG0369 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 1 89568616 173043599 1 2 90 2 0 0 0 0 0.11 0.69 2 0 0 NA NA NA 7 7 7 10.45 0.16 99.84 0 1 2 Whitelist PRAD-CA 0.54 0.89 0 0 0.48 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 2 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 3 99775834 124213104 5 11 90 2 0 1 2 6 0.53 0 3 0 0 NA NA NA NA NA NA 10.45 4.43 95.52 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 16 0.09 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 4 39548958 39625207 1 5 90 1 0 0 0 4 0.39 0.39 3 0 0 NA NA NA NA NA NA 10.45 0.03 99.96 0 2 1 Whitelist PRAD-CA 5 0.62 0.64 0 0 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 5 68065394 160045329 2 10 90 0 0 2 0 8 0.11 0 6 0 0 6 6 6 13 13 13 10.45 6.72 93.13 0 1 2 Whitelist PRAD-CA 0.96 0 0 0 0.48 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 6 170600085 170752913 1 1 90 1 0 0 0 0 0.39 0.82 2 NA NA NA NA NA 5 5 5 10.45 1.43 98.42 0 1 2 Whitelist PRAD-CA 0.62 0.96 NA NA 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 7 102804193 107311882 1 2 90 0 1 1 0 0 0.57 1 1 0 0 NA NA NA NA NA NA 10.45 0 99.78 0 2 NA Whitelist PRAD-CA 0.68 1 0 0 0.64 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 8 17096210 39325123 3 3 90 0 1 1 1 0 0.8 0.81 3 0 0 NA NA NA NA NA NA 10.45 14.89 85.11 0 2 1 Whitelist PRAD-CA 0.87 0.95 0 0 0.84 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 9 26685373 27276880 1 2 90 1 0 0 0 1 0.39 0.41 1 0 NA NA NA NA NA NA NA 10.45 0.62 98.68 0 2 NA Whitelist PRAD-CA 0.68 0.65 0 NA 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 10 64499541 64512161 1 1 90 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.45 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 11 114402079 115793395 2 2 90 1 0 0 1 0 0.57 0.07 3 0 0 NA NA NA 9 5 5 10.45 2.9 96.67 2 0 1 Whitelist PRAD-CA 0.68 0.21 0 0 0.64 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 12 113380858 116338250 1 1 90 1 0 0 0 0 0.39 0.2 1 0 NA NA NA NA 6 6 6 10.45 2.79 97.01 0 2 NA Whitelist PRAD-CA 0.62 0.42 0 NA 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 13 50766672 50798207 1 1 90 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 10.45 0 100 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 14 NA NA 0 0 90 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 16 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 17 40152710 78336183 2 10 90 0 1 1 0 8 0.57 0 5 0 0 5 5 5 5 5 5 10.45 5.27 94.73 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 18 NA NA 0 0 90 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 19 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 20 13974036 36596344 1 3 90 2 0 1 0 0 0.3 0.13 2 0 0 NA NA NA NA NA NA 10.45 0.36 98.66 0 1 2 Whitelist PRAD-CA 0.62 0.32 0 0 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 21 39880574 42870234 1 5 90 0 1 0 0 4 0.39 0 3 0 0 NA NA NA 5 5 5 10.45 4.41 72.95 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 22 NA NA 0 0 90 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist PRAD-CA NA 0 0 NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0371 X NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0371 PRAD 0.55 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51138 CPCG0371 male alive C61 no treatment 60 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 1 10695500 119824570 4 10 86 1 1 1 1 6 1 0 7 0 0 7 7 7 7 7 7 8.69 1.27 98.73 0 2 1 Whitelist PRAD-CA 0.96 0.02 0 0 1 1 High confidence PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA Canonical without polyploidization 14 0.08 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 2 25198140 45674242 2 2 86 0 0 1 1 0 0.57 0.33 1 0 0 NA NA NA NA NA NA 8.69 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 0.58 0 0 0.64 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 3 16219111 190674382 1 5 86 1 0 2 1 1 0.57 0.13 1 0 0 NA NA NA NA NA NA 8.69 0 99.86 0 2 NA Whitelist PRAD-CA 0.93 0.33 0 0 0.64 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 9 0.05 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 4 25824715 118050161 2 3 86 1 0 1 0 1 0.57 0.19 1 0 0 NA NA NA NA NA NA 8.69 0 99.78 0 2 NA Whitelist PRAD-CA 0.62 0.41 0 0 0.64 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 5 64973978 130543831 2 2 86 0 0 1 1 0 0.57 0.66 1 0 0 NA NA NA NA NA NA 8.69 0.01 99.87 0 2 NA Whitelist PRAD-CA 0.68 0.87 0 0 0.64 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 6 26126568 27026623 1 3 86 1 0 0 0 2 0.39 0.18 1 0 0 NA NA NA NA NA NA 8.69 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.39 0 0 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 7 NA NA 0 0 86 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.84 NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 8 22219476 23033784 2 4 86 1 0 0 1 2 0.57 0.08 3 0 0 NA NA NA 5 5 5 8.69 0.58 99.42 0 2 1 Whitelist PRAD-CA 1 1 0.23 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA With other complex events 6 0.03 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 9 NA NA 0 0 86 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 10 74600037 92639916 1 3 86 1 0 0 0 2 0.39 1 2 NA 0 NA NA NA NA NA NA 8.69 13.31 86.51 0 1 2 Whitelist PRAD-CA 0.87 1 NA 0 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 11 NA NA 0 0 86 0 0 0 0 0 NA 1 NA 0.08 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 0.08 NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 12 19811556 132208936 3 6 86 1 2 0 0 3 0.3 0 10 0 0 10 10 10 12 12 12 8.69 17.72 82.2 0 1 2 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 9 0.05 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 13 34296665 97625589 1 1 86 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 8.69 54.99 45.01 0 1 2 Whitelist PRAD-CA 0.62 0.93 NA NA 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 14 NA NA 0 0 86 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 15 25342624 94664891 1 2 86 2 0 0 0 0 0.11 0.31 3 0 0 NA NA NA NA NA NA 8.69 0.51 99.39 0 2 1 Whitelist PRAD-CA 0.54 0.55 0 0 0.48 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 16 75679058 79910515 1 1 86 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 8.69 0 99.9 0 2 NA Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 17 41776877 43203946 1 4 86 2 0 0 0 2 0.11 0.03 3 0 0 NA NA NA NA NA NA 8.69 0.81 99.19 0 2 1 Whitelist PRAD-CA 0.54 0.11 0 0 0.48 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 18 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 19 NA NA 0 0 86 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 20 20333170 56648940 6 6 86 2 2 1 1 0 0.88 0 11 0 0 11 11 11 11 11 11 8.69 6.11 92.9 0 2 1 Whitelist PRAD-CA 0.93 0 0 0 0.91 1 High confidence PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA Canonical without polyploidization 12 0.07 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 21 39845412 42872803 1 1 86 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 5 5 8.69 6.64 70.72 0 1 2 Whitelist PRAD-CA 0.62 0.25 NA NA 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 22 NA NA 0 0 86 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0372 X 33278368 33439256 1 1 86 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 8.69 100 0 0 1 NA Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 1 No PRAD-CA CPCG0372 PRAD 0.53 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51139 CPCG0372 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 3 71781757 149935155 6 9 16 2 1 1 2 3 0.88 0 1 0 0 NA NA NA NA NA NA 4.95 0 99.95 0 2 NA Whitelist PRAD-CA 0.85 0 0 0 0.91 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 15 0.47 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 4 70087924 70135683 1 1 16 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 4.95 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.06 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 5 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 12 NA NA 0 0 16 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.77 NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 17 NA NA 0 0 16 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.04 NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0373 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0373 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51140 CPCG0373 male alive C61 no treatment 59 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 2 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 3 145829796 169328478 4 4 25 1 1 1 1 0 1 0.01 12 0 0 12 12 12 13 13 13 14.68 0.8 99.06 0 1 2 Whitelist PRAD-CA 1 0.03 0 0 1 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 8 0.16 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 6 66522815 129704415 1 1 25 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA NA NA NA 14.68 36.92 62.9 0 1 2 Whitelist PRAD-CA 0.62 0.87 NA NA 0.59 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 7 151755122 152149760 4 4 25 2 0 2 0 0 0.26 0.04 2 0 0 NA NA NA NA NA NA 14.68 99.76 0 0 1 3 Whitelist PRAD-CA 0.62 0.15 0 0 0.59 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 8 0.16 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 8 14069191 33784520 4 4 25 1 1 1 1 0 1 0.04 8 0 0 8 8 8 9 9 9 14.68 12.47 87.52 0 1 2 Whitelist PRAD-CA 1 0.13 0 0 1 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 8 0.16 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 10 57299939 58736961 2 2 25 0 0 1 1 0 0.57 0.32 3 NA 0 NA NA NA NA NA NA 14.68 0.01 99.81 0 2 1 Whitelist PRAD-CA 0.68 0.57 NA 0 0.64 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 12 28926676 31049781 1 1 25 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 14.68 1.59 98.33 0 2 3 Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 13 61373086 106859815 2 2 25 0 0 1 1 0 0.57 0.01 6 0 0 6 6 6 7 7 7 14.68 39.2 60.8 0 1 2 Whitelist PRAD-CA 0.68 0.05 0 0 0.64 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 14 22356682 22964902 1 1 25 1 0 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 14.68 15 81.29 0 2 NA Whitelist PRAD-CA 0.62 0.78 NA NA 0.59 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 2 0.04 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 18 NA NA 0 0 25 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.74 NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0374 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0374 PRAD 0.37 1.95 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51141 CPCG0374 male alive C61 no treatment 63 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 1 172160158 214270880 2 2 88 1 0 1 0 0 0.57 0.32 1 0 0 NA NA NA NA NA NA 10.41 0 100 0 2 NA Whitelist PRAD-CA 0.68 0.57 0 0 0.64 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 2 103449140 146851707 8 8 88 2 1 3 2 0 0.8 0.33 9 0 0 9 9 9 13 13 13 10.41 28.73 71.16 0 2 1 Whitelist PRAD-CA 0.87 0.58 0 0 0.84 1 High confidence PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA Canonical without polyploidization 16 0.09 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 3 160780610 165992027 3 3 88 1 0 1 1 0 0.8 0.21 3 0 0 NA NA NA 11 9 9 10.41 3.36 96.5 0 2 1 Whitelist PRAD-CA 0.87 0.44 0 0 0.84 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 4 118331066 138561924 4 4 88 1 0 1 2 0 0.57 0 5 0 0 5 5 5 5 5 5 10.41 0.39 99.6 0 2 1 Whitelist PRAD-CA 0.68 0.01 0 0 0.64 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 5 82392505 109609228 2 2 88 2 0 0 0 0 0.11 0.5 6 0 0 6 5 6 9 5 5 10.41 17.71 82.15 0 1 0 Whitelist PRAD-CA 0.54 0.75 0 0 0.48 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 6 66614884 127977752 2 3 88 2 0 0 0 1 0.11 0.82 3 0 0 NA NA NA 5 5 5 10.41 33.78 66.08 0 1 2 Whitelist PRAD-CA 0.62 0.96 0 0 0.48 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 7 14565219 18687976 7 7 88 3 0 2 2 0 0.44 0.05 9 0 0 9 9 9 9 9 9 10.41 0.37 99.41 0 2 1 Whitelist PRAD-CA 0.68 0.17 0 0 0.64 1 High confidence PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA Canonical without polyploidization 14 0.08 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 8 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 9 7559115 10036808 5 5 88 2 1 1 1 0 0.9 0 10 0 0 10 10 10 11 11 11 10.41 1.29 98.01 0 1 2 Whitelist PRAD-CA 0.93 0.01 0 0 0.92 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 10 0.06 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 10 64711983 68595139 2 2 88 0 0 1 1 0 0.57 0.44 2 NA 0 NA NA NA NA NA NA 10.41 0.05 99.77 0 1 2 Whitelist PRAD-CA 0.68 0.69 NA 0 0.64 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 11 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 12 39777632 83554265 14 14 88 3 5 3 3 0 0.84 0 17 0 0 17 17 17 17 17 17 10.41 0.31 99.61 0 2 1 Whitelist PRAD-CA 0.9 0 0 0 0.88 1 High confidence PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA Canonical without polyploidization 28 0.16 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 13 109292002 109498152 1 1 88 0 0 0 1 0 0.39 0.23 1 0 NA NA NA NA 5 5 5 10.41 1.26 98.74 0 2 NA Whitelist PRAD-CA 0.62 0.47 0 NA 0.59 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 14 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 15 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 16 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 17 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 18 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 19 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 20 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 21 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 22 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0375 X 79208830 104781735 1 2 88 2 0 0 0 0 0.11 0.33 1 NA 0 NA NA NA NA NA NA 10.41 100 0 0 1 NA Whitelist PRAD-CA 0.54 0.58 NA 0 0.48 1 No PRAD-CA CPCG0375 PRAD 0.46 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51142 CPCG0375 male alive C61 no treatment 69 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 1 95280610 120433658 1 3 107 1 1 0 0 1 0.57 0.59 3 0 0 NA NA NA 9 3 3 14.54 15.84 75.32 0 1 2 Whitelist PRAD-CA 0.62 0.81 0 0 0.64 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 2 137740995 196942970 1 2 107 1 0 0 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 14.54 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 0.04 NA 0 0.64 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 3 44458433 186255713 2 10 107 0 0 2 2 6 0.26 0 1 0 0 NA NA NA NA NA NA 14.54 0 99.97 0 2 NA Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 14 0.07 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 4 851765 78697476 1 5 107 1 1 1 0 2 0.8 0.56 1 0.01 0 NA NA NA NA NA NA 14.54 0 99.99 0 2 NA Whitelist PRAD-CA 0.68 0.79 0.01 0 0.84 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 5 63925115 64090809 1 1 107 1 0 0 0 0 0.39 0.42 2 0 NA NA NA NA NA NA NA 14.54 0.09 99.79 0 1 2 Whitelist PRAD-CA 0.62 0.67 0 NA 0.59 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 6 NA NA 0 0 107 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.26 NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 7 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 8 NA NA 0 0 107 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.87 NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 9 NA NA 0 0 107 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.33 NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 10 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 11 108115486 127712533 1 3 107 1 0 1 1 0 0.8 0.49 7 0 0 7 6 7 9 6 6 14.54 28.94 70.64 0 1 2 Whitelist PRAD-CA 0.87 0.74 0 0 0.84 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 12 91336933 91408764 1 1 107 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 14.54 0 99.92 0 2 NA Whitelist PRAD-CA 0.62 0.49 NA NA 0.59 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 13 26082635 100108275 4 4 107 1 1 1 1 0 1 0.79 3 0 0 NA NA NA NA NA NA 14.54 38.78 44.29 0 2 1 Whitelist PRAD-CA 1 0.94 0 0 1 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 14 NA NA 0 0 107 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 15 39242166 40387322 2 3 107 1 1 0 0 1 0.57 0.08 3 0 0 NA NA NA 5 5 5 14.54 0.84 83.3 0 2 1 Whitelist PRAD-CA 0.62 0.22 0 0 0.64 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 16 NA NA 0 0 107 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.1 0 NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 17 45491837 70847983 13 20 107 4 3 3 3 7 0.97 0 9 0 0 9 6 9 16 6 6 14.54 50.27 48.72 1 3 4 Whitelist PRAD-CA 0.86 0 0 0 0.98 0 Low confidence PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA After polyploidization 33 0.15 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 18 NA NA 0 0 107 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 19 16290352 58417345 1 8 107 3 1 1 1 2 0.57 0 1 0 0 NA NA NA NA NA NA 14.54 0 98.62 0 2 NA Whitelist PRAD-CA 0.62 0.01 0 0 0.64 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 14 0.07 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 20 14433797 14469761 1 1 107 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 14.54 0.06 98.95 0 2 3 Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 21 37609850 39433359 2 3 107 0 1 0 1 1 0.57 0 4 0 0 4 4 4 9 9 9 14.54 3.13 74.23 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.64 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 22 37269162 45460939 1 1 107 0 0 1 0 0 0.39 0.04 1 0 NA NA NA NA 5 5 5 14.54 0.98 75.24 0 2 NA Whitelist PRAD-CA 0.62 0.14 0 NA 0.59 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0379 X NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0379 PRAD 0.71 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51144 CPCG0379 male alive C61 no treatment 67 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 1 234620154 235585077 3 7 60 2 1 0 0 4 0.3 0.03 2 0 0 NA NA NA 5 5 5 9.17 0.79 99.21 0 1 2 Whitelist PRAD-CA 0.77 0.1 0 0 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 10 0.08 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 2 206823483 232316105 1 4 60 0 0 1 0 3 0.39 0.02 1 0 0 NA NA NA NA NA NA 9.17 0 99.91 0 2 NA Whitelist PRAD-CA 0.68 0.07 0 0 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 3 173943616 174571844 1 1 60 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 9.17 0.32 99.63 0 2 3 Whitelist PRAD-CA 0.62 0.32 NA NA 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 4 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 5 67591146 67702135 1 1 60 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 9.17 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.4 NA NA 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 6 116568244 160958776 3 6 60 0 2 1 0 3 0.3 0 1 0 0 NA NA NA NA NA NA 9.17 0 99.86 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 9 0.08 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 7 17061945 152895469 1 7 60 3 0 1 0 3 0.11 0.01 8 0 0 8 8 8 9 9 9 9.17 2.43 97.34 0 1 2 Whitelist PRAD-CA 0.54 0.06 0 0 0.48 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 11 0.09 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 8 29218443 67546223 1 1 60 0 0 0 1 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 9.17 73.67 26.19 0 2 3 Whitelist PRAD-CA 0.62 0.62 NA NA 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 9 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 10 52049320 130767683 7 7 60 4 1 1 1 0 0.28 0.02 6 0 0 6 3 5 6 3 5 9.17 6.13 93.69 0 2 1 Whitelist PRAD-CA 0.62 0.08 0 0 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 14 0.12 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 11 113581251 119205390 3 9 60 1 0 1 1 6 0.8 0 6 0 0 6 4 6 9 4 4 9.17 2.63 96.94 0 1 2 Whitelist PRAD-CA 7 0.85 0 0 0 0.84 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 12 0.1 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 12 22162787 132427006 2 3 60 0 1 0 1 1 0.57 0.06 7 0.06 0 7 7 7 9 9 9 9.17 2.85 97.07 0 2 1 Whitelist PRAD-CA 0.62 0.19 0.06 0 0.64 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 13 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 14 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 15 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 16 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 17 NA NA 0 0 60 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.23 NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 18 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 19 2858788 7011175 1 1 60 1 0 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 9.17 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.29 NA NA 0.59 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 20 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 21 39868083 44846485 1 3 60 2 0 0 0 1 0.11 0.01 3 0 0 NA NA NA NA NA NA 9.17 0.21 77.15 0 2 1 Whitelist PRAD-CA 0.62 0.03 0 0 0.48 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 22 NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0380 X NA NA 0 0 60 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0380 PRAD 0.51 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51145 CPCG0380 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 1 NA NA 0 0 51 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.95 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 2 180809132 181322461 2 2 51 0 2 0 0 0 0.11 0.04 3 0 0 NA NA NA 5 5 5 7.59 12.39 87.51 0 1 2 Whitelist PRAD-CA 0.54 0.13 0 0 0.48 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 3 10992874 71798095 1 6 51 1 1 0 0 4 0.57 0 6 0 0 6 6 6 9 9 9 7.59 3.06 96.89 0 1 2 Whitelist PRAD-CA 0.62 0.01 0 0 0.64 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 8 0.08 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 4 6644123 140857198 1 5 51 2 0 0 0 3 0.11 0.39 4 0 0 4 4 4 5 5 5 7.59 1.75 98.23 0 1 2 Whitelist PRAD-CA 0.45 0.64 0 0 0.48 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 7 0.07 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 5 NA NA 0 0 51 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.93 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 6 26396077 155363857 2 7 51 1 0 2 1 3 0.57 0 4 0 0 4 4 4 5 5 5 7.59 7.05 92.8 0 1 2 Whitelist PRAD-CA 4 0.77 0 0 0 0.64 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 11 0.11 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 7 94237159 94277825 1 1 51 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 7.59 0 99.78 0 2 NA Whitelist PRAD-CA 0.62 0.61 NA NA 0.59 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 8 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 9 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 10 88270432 90747389 2 8 51 1 0 0 1 6 0.57 0 5 0 0 5 3 5 5 3 3 7.59 1.8 98.03 0 1 2 Whitelist PRAD-CA 0.62 0.01 0 0 0.64 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 10 0.1 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 11 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 12 NA NA 0 0 51 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.91 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 13 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 14 60877928 62565670 1 1 51 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 5 5 5 7.59 26.47 72.61 0 1 2 Whitelist PRAD-CA 0.62 0.22 NA NA 0.59 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 15 38835999 60356498 1 5 51 3 0 0 0 2 0.03 0 6 0 0 6 6 6 7 7 7 7.59 0.33 99.54 0 1 2 Whitelist PRAD-CA 0.62 0.02 0 0 0.33 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 8 0.08 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 16 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 17 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 18 NA NA 0 0 51 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.64 NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 20 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 21 40076216 42871074 1 5 51 1 0 0 0 4 0.39 0 2 0 0 NA NA NA 5 5 5 7.59 0.31 77.04 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.59 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 6 0.06 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0387 X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0387 PRAD 0.52 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51147 CPCG0387 male alive C61 no treatment 66 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 1 193746342 196274612 3 3 212 0 1 1 1 0 0.8 0.52 3 0 0 NA NA NA 11 11 11 10.48 2.94 97.06 0 2 1 Whitelist PRAD-CA 0.87 0.76 0 0 0.84 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 2 117339084 155136678 11 11 212 4 1 3 3 0 0.63 0.71 15 0 0 15 10 15 17 10 10 10.48 9.25 90.65 0 1 2 Whitelist PRAD-CA 0.74 0.9 0 0 0.71 0 High confidence PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 22 0.05 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 3 30946713 151480649 8 19 212 2 2 2 2 11 1 0 14 0 0 14 8 14 17 9 15 10.48 1.5 95.42 0 2 1 Whitelist PRAD-CA 0.93 0.02 0 0 1 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 27 0.06 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA False positive; manually removed PRAD-CA::CPCG0388 4 136152748 155377022 6 6 212 2 0 2 2 0 0.57 0.04 10 0 0 10 10 10 21 21 21 10.48 1.03 98.94 0 1 2 Whitelist PRAD-CA 0.68 0.13 0 0 0.64 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 5 22412327 101716388 11 11 212 2 1 4 4 0 0.48 0 32 0 0 32 16 27 33 17 28 10.48 19.91 77.33 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 0 High confidence PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA With other complex events 22 0.05 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 6 58063731 121544675 6 6 212 2 1 1 2 0 0.88 0.19 7 0 0 7 7 7 7 7 7 10.48 33.84 62.85 0 2 1 Whitelist PRAD-CA 0.93 0.41 0 0 0.91 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 7 14105508 147275919 3 10 212 1 1 2 2 4 0.88 0.28 15 0 0 15 6 8 15 6 8 10.48 3.02 94.36 0 2 1 Whitelist PRAD-CA 0.96 0.53 0 0 0.91 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 16 0.04 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 8 106933930 107851446 2 2 212 0 1 1 0 0 0.57 0.53 1 0 0 NA NA NA 7 7 7 10.48 22.94 76.94 0 2 NA Whitelist PRAD-CA 0.68 0.76 0 0 0.64 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 9 11422131 11448269 1 1 212 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 10.48 0.02 99.97 0 1 2 Whitelist PRAD-CA 0.62 0.02 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 10 NA NA 0 0 212 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA 9 3 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.75 0 NA NA 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 11 80556501 80594346 1 1 212 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 10.48 0.06 99.79 0 2 NA Whitelist PRAD-CA 0.62 0.03 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 12 7695125 132397887 24 24 212 5 7 6 6 0 0.95 0 27 0 0 27 27 27 27 27 27 10.48 0.47 99.45 0 2 1 Whitelist PRAD-CA 0.97 0 0 0 0.97 0 High confidence PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 48 0.11 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 13 101885250 108052344 5 5 212 2 1 1 1 0 0.9 0.34 1 0 0 NA NA NA NA NA NA 10.48 0.25 85.6 0 2 NA Whitelist PRAD-CA 0.93 0.59 0 0 0.92 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 10 0.02 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 14 45553056 48427832 3 3 212 2 1 0 0 0 0.3 0.32 13 0 0 13 6 6 17 7 7 10.48 3.58 81.42 0 1 2 Whitelist PRAD-CA 0.62 0.57 0 0 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 6 0.01 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 15 89667549 89912827 1 1 212 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 10.48 0 84.59 0 2 NA Whitelist PRAD-CA 0.62 0.12 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 16 58630335 62422229 1 2 212 2 0 0 0 0 0.11 0.14 2 NA 0 NA NA NA NA NA NA 10.48 0.02 99.87 0 1 2 Whitelist PRAD-CA 0.54 0.33 NA 0 0.48 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 17 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 18 28430695 28753274 1 2 212 0 0 1 0 1 0.39 0.39 1 NA NA NA NA NA NA NA NA 10.48 0.1 99.84 0 2 NA Whitelist PRAD-CA 0.68 0.64 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 19 46029235 48291109 1 1 212 1 0 0 0 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 10.48 0 92.72 0 2 NA Whitelist PRAD-CA 0.62 0.33 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 20 14782349 14844084 1 1 212 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 10.48 0.1 99.81 0 1 2 Whitelist PRAD-CA 0.62 0.26 NA NA 0.59 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 21 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 22 NA NA 0 0 212 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0388 X 34076987 37773315 5 12 212 1 1 2 1 7 0.9 0 1 0 0 NA NA NA NA NA NA 10.48 100 0 0 1 NA Whitelist PRAD-CA 3 0.83 0 0 0 0.92 0 No PRAD-CA CPCG0388 PRAD 0.68 1.85 Prost-AdenoCA NA 17 0.04 NA 2 PRAD-CA DO51148 CPCG0388 male alive C61 no treatment 54 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 1 111412873 245395183 2 4 198 1 1 0 0 2 0.57 0.23 1 0 0 NA NA NA 5 5 5 12.88 1.35 98.65 0 2 NA Whitelist PRAD-CA 0.68 0.47 0 0 0.64 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 2 99908050 121954033 2 2 198 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 5 3 3 12.88 0.02 99.87 0 2 NA Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 3 94830204 149541270 2 6 198 0 0 1 1 4 0.57 0.49 6 0 0 6 6 6 13 7 7 12.88 4.24 92.12 0 1 2 Whitelist PRAD-CA 14 0.54 0.73 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 8 0.02 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 4 95878871 95893077 1 1 198 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 13 13 13 12.88 3.6 96.39 0 2 NA Whitelist PRAD-CA 0.62 0 0 NA 0.59 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 5 44374104 175313675 43 70 198 6 11 13 13 27 0.38 0 69 0 0 69 25 69 73 25 25 12.88 39.18 58.15 0 1 2 Whitelist PRAD-CA 12_3 0.76 0 0 0 0.59 1 High confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA With other complex events 113 0.29 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 6 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 7 NA NA 0 0 198 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 NA NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 8 28196069 42130039 4 6 198 1 2 1 0 2 0.57 0.63 1 0 0 NA NA NA NA NA NA 12.88 0.02 99.97 0 2 NA Whitelist PRAD-CA 0.62 0.84 0 0 0.64 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 9 13301238 14615764 1 1 198 1 0 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 12.88 0.93 98.4 0 1 2 Whitelist PRAD-CA 0.62 1 0 NA 0.59 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 10 13110713 90642826 4 6 198 2 1 0 1 2 0.57 1 7 0 0 7 7 7 7 7 7 12.88 3.2 93.34 0 2 1 Whitelist PRAD-CA 0.93 1 0 0 0.64 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 11 NA NA 0 0 198 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.14 0 NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 12 62827736 124709304 1 3 198 1 0 1 0 1 0.57 0.18 5 0 0 5 5 5 8 8 8 12.88 38.25 61.66 0 1 2 Whitelist PRAD-CA 0.87 0.39 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 5 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 13 64603127 64635294 1 1 198 0 0 1 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 12.88 27.19 72.81 0 1 NA Whitelist PRAD-CA 0.62 0.07 NA NA 0.59 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 14 58743270 100431685 2 10 198 0 0 0 2 8 0.11 0 7 0 0 7 7 7 13 7 7 12.88 15.1 83.99 0 2 1 Whitelist PRAD-CA 17_19 0.68 0 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 12 0.03 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 15 21900181 86030662 6 12 198 3 2 0 1 6 0.34 0 2 0 0 NA NA NA NA NA NA 12.88 16.59 78.52 0 1 2 Whitelist PRAD-CA 5 0.54 0 0 0 0.59 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA With other complex events 18 0.05 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 16 29316810 30854518 1 1 198 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 12.88 0 99.9 0 2 NA Whitelist PRAD-CA 0.62 0.4 NA NA 0.59 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 17 40076564 53795248 5 16 198 0 3 1 1 11 0.28 0 10 0 0 10 10 10 21 21 21 12.88 13.65 86.13 0 1 2 Whitelist PRAD-CA 0.79 0 0 0 0.59 1 High confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 21 0.05 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 18 NA NA 0 0 198 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.21 NA NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 19 2484194 50838927 2 18 198 0 2 0 0 16 0.11 0 13 0 0 13 13 13 15 15 15 12.88 27.11 72.72 0 2 1 Whitelist PRAD-CA 14_17 0.87 0 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 20 0.05 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 20 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 21 40038879 42877689 1 1 198 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 12.88 6.35 64.25 0 1 2 Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 22 39503079 46692797 1 6 198 2 0 0 0 4 0.11 0.01 4 0 0 4 4 4 5 5 5 12.88 12.38 87.62 0 1 2 Whitelist PRAD-CA 17 0.54 0.05 0 0 0.48 1 Linked to high confidence PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA Canonical without polyploidization 8 0.02 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0392 X NA NA 0 0 198 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.01 NA NA NA 1 No PRAD-CA CPCG0392 PRAD 0.68 1.85 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51150 CPCG0392 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 1 101801416 240519770 1 5 176 4 0 1 0 0 0.04 0.12 11 0 0 11 11 11 15 15 15 15.99 0.99 99.01 2 1 2 Whitelist PRAD-CA 0.45 0.31 0 0 0.36 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 2 44864381 196384507 1 10 176 3 0 0 2 5 0.14 0.68 5 0 0 5 5 5 9 9 9 15.99 6.61 93.3 0 2 1 Whitelist PRAD-CA 8 0.86 0.88 0 0 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 15 0.04 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 3 98011541 158330216 21 28 176 8 6 3 4 7 0.42 0 43 0 0 43 43 43 49 49 49 15.99 7.74 92.21 0 2 1 Whitelist PRAD-CA 8 0.62 0 0 0 0.63 1 High confidence PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA Canonical without polyploidization 49 0.14 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 4 10877187 133253578 11 24 176 2 5 7 8 2 0.28 0 30 0 0 30 30 30 33 31 31 15.99 4.63 95.35 4 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA Canonical without polyploidization 46 0.13 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 5 12953930 128804942 21 27 176 5 3 7 6 6 0.64 0 19 0 0 19 9 14 20 10 15 15.99 26.69 70.65 1 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.72 1 High confidence PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA With other complex events 48 0.14 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 6 39725367 126761938 1 4 176 2 1 0 0 1 0.3 0.04 3 0 0 NA NA NA NA NA NA 15.99 36.42 63.45 0 2 1 Whitelist PRAD-CA 0.68 0.13 0 0 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 7 85889225 85936065 1 1 176 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 9 9 9 15.99 97.72 2.05 0 2 3 Whitelist PRAD-CA 0.62 0.03 NA NA 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 8 131182988 138911085 5 5 176 1 0 2 2 0 0.53 0 7 0 0 7 7 7 19 19 19 15.99 2.17 97.83 1 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA Canonical without polyploidization 10 0.03 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 9 28522866 30547255 1 1 176 1 0 0 0 0 0.39 0.85 1 0 NA NA NA NA 7 7 7 15.99 7.04 92.26 0 2 NA Whitelist PRAD-CA 0.62 0.98 0 NA 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 10 110478350 111640353 2 2 176 0 0 1 1 0 0.57 0.2 4 0 0 4 4 4 7 7 7 15.99 0.74 99.08 0 1 2 Whitelist PRAD-CA 0.68 0.43 0 0 0.64 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 11 127102953 128498177 3 3 176 1 0 1 1 0 0.8 0.37 1 0 0 NA NA NA NA NA NA 15.99 0.31 99.26 0 2 NA Whitelist PRAD-CA 0.87 0.62 0 0 0.84 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 12 75186634 75474713 1 2 176 0 0 0 1 1 0.39 0.07 1 NA NA NA NA NA NA NA NA 15.99 0.06 99.86 0 2 NA Whitelist PRAD-CA 0.68 0.21 NA NA 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 13 50959974 77584106 1 3 176 1 1 0 0 1 0.57 0.53 4 0 0 4 3 4 5 3 3 15.99 19.07 80.93 0 1 0 Whitelist PRAD-CA 0.87 0.76 0 0 0.64 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 5 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 14 NA NA 0 0 176 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.16 NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 15 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 16 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 17 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 18 31991444 37860639 5 5 176 1 0 2 2 0 0.53 0 7 0 0 7 7 7 15 15 15 15.99 1.37 98.59 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 19 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 20 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 21 20652850 25461698 1 1 176 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 15.99 0 77.35 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 22 NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0404 X NA NA 0 0 176 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0404 PRAD 0.65 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51152 CPCG0404 male alive C61 no treatment 55 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 1 211983764 245301532 1 2 72 0 0 0 1 1 0.39 0.38 1 NA NA NA NA NA NA NA NA 9.51 0 100 0 2 NA Whitelist PRAD-CA 0.68 0.63 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 2 NA NA 0 0 72 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.53 NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 3 46487318 84438649 1 1 72 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 9.51 19.17 80.72 0 1 2 Whitelist PRAD-CA 0.62 0.48 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 4 127348851 137036859 9 9 72 3 4 1 1 0 0.39 0 9 0 0 9 9 9 13 13 13 9.51 1.22 98.76 0 2 1 Whitelist PRAD-CA 0.62 0 0 0 0.59 1 High confidence PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA Canonical without polyploidization 18 0.12 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 5 87139293 114434388 4 4 72 1 1 1 1 0 1 0.81 6 0 0 6 6 6 7 7 7 9.51 14.72 85.13 0 1 2 Whitelist PRAD-CA 1 0.95 0 0 1 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 6 3735315 23822999 2 5 72 1 1 0 0 3 0.57 0.08 1 0.36 0 NA NA NA NA NA NA 9.51 1.48 98.34 0 2 NA Whitelist PRAD-CA 0.62 0.22 0.36 0 0.64 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 7 0.05 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 7 NA NA 0 0 72 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 8 9283666 9434552 1 2 72 1 0 0 0 1 0.39 0.79 1 NA NA NA NA NA NA NA NA 9.51 7.75 92.24 0 2 NA Whitelist PRAD-CA 0.68 0.94 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 9 21815101 22309738 1 1 72 1 0 0 0 0 0.39 0.21 1 0 NA NA NA NA NA NA NA 9.51 0 99.29 0 2 NA Whitelist PRAD-CA 0.62 0.43 0 NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 10 43511029 104989644 1 8 72 0 0 0 3 5 0.03 0.02 8 0 0 8 7 8 9 7 7 9.51 5.73 94.09 0 2 1 Whitelist PRAD-CA 0.87 0.07 0 0 0.33 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 11 0.08 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 11 NA NA 0 0 72 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 12 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 13 31807153 73354491 1 1 72 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 9.51 36.07 63.93 0 1 2 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 14 74045493 74375310 1 1 72 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 9.51 0 99.09 0 2 NA Whitelist PRAD-CA 0.62 0.91 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 15 56967988 59810139 2 4 72 1 0 1 0 2 0.57 0 3 0 0 NA NA NA NA NA NA 9.51 2.77 97.23 0 2 1 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 16 14339532 15178021 1 1 72 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.51 0 99.9 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 17 4506002 8041832 2 2 72 0 0 1 1 0 0.57 0 4 0 0 4 4 4 9 9 9 9.51 6.21 93.79 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.64 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 18 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 19 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 20 NA NA 0 0 72 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 21 39959676 42873147 2 2 72 0 0 1 1 0 0.57 0.22 2 NA 0 NA NA NA NA NA NA 9.51 6.04 71.31 0 1 2 Whitelist PRAD-CA 0.68 0.45 NA 0 0.64 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 22 NA NA 0 0 72 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.8 NA NA NA 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0407 X 11212789 15182553 3 3 72 1 0 1 1 0 0.8 1 1 0 0 NA NA NA NA NA NA 9.51 100 0 0 1 NA Whitelist PRAD-CA 0.87 1 0 0 0.84 1 No PRAD-CA CPCG0407 PRAD 0.73 1.89 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51153 CPCG0407 male alive C61 no treatment 57 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 1 23745763 30288802 1 3 106 3 0 0 0 0 0.03 0.36 6 0 0 6 6 6 9 9 9 8.14 0.81 99.19 0 1 2 Whitelist PRAD-CA 0.41 0.62 0 0 0.33 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 2 61391849 120240247 4 11 106 2 1 1 0 7 0.57 0.08 3 0 0 NA NA NA 5 5 5 8.14 2.36 97.54 0 2 1 Whitelist PRAD-CA 1 0.98 0.23 0 0 0.64 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 15 0.07 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 3 9353418 184040107 8 19 106 4 0 2 2 11 0.26 0 28 0 0 28 28 28 29 29 29 8.14 12.39 87.49 0 1 2 Whitelist PRAD-CA 8 0.72 0 0 0 0.59 1 High confidence PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA Canonical without polyploidization 27 0.13 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 4 39471000 39492114 1 2 106 0 0 1 1 0 0.57 0.12 1 0 0 NA NA NA NA NA NA 8.14 0 99.98 0 2 NA Whitelist PRAD-CA 0.68 0.31 0 0 0.64 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 5 93202656 93217649 1 5 106 0 1 0 0 4 0.39 0.01 4 0 0 4 0 3 10 6 8 8.14 1.33 98.53 0 1 2 Whitelist PRAD-CA 0.62 0.04 0 0 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 6 149351655 160192925 2 2 106 0 0 1 1 0 0.57 0.06 3 0 0 NA NA NA 9 9 9 8.14 6.64 93.2 0 2 1 Whitelist PRAD-CA 0.68 0.2 0 0 0.64 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 7 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 8 75912919 113963127 4 13 106 3 0 1 0 9 0.11 0 18 0 0 18 18 18 25 25 25 8.14 17.46 82.53 0 1 2 Whitelist PRAD-CA 3 0.62 0 0 0 0.48 1 High confidence PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA Canonical without polyploidization 17 0.08 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 9 137361433 139064782 1 3 106 0 0 0 1 2 0.39 0 3 0 0 NA NA NA 9 5 5 8.14 1.56 95.33 0 2 1 Whitelist PRAD-CA 0.62 0.01 0 0 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 10 89690082 90387656 1 1 106 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 8.14 0.51 99.31 0 1 2 Whitelist PRAD-CA 0.62 0.26 NA NA 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 11 18268170 94669560 1 13 106 0 0 1 1 11 0.57 0 5 0 0 5 0 3 6 3 3 8.14 0.75 98.7 0 1 2 Whitelist PRAD-CA 8 0.9 0 0 0 0.64 1 Linked to high confidence PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA With other complex events 15 0.07 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 12 9962423 104916091 7 9 106 2 2 2 1 2 0.93 0 13 0 0 13 13 13 17 17 17 8.14 3.88 96.04 0 1 2 Whitelist PRAD-CA 0.68 0.01 0 0 0.95 1 High confidence PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA Canonical without polyploidization 16 0.08 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 13 NA NA 0 0 106 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.52 NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 14 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 15 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 16 72533218 73890308 1 3 106 1 0 0 0 2 0.39 0.76 4 NA 0 4 4 4 7 7 7 8.14 3.09 96.81 0 1 2 Whitelist PRAD-CA 0.87 0.93 NA 0 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 17 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 18 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 19 51697953 51945356 1 1 106 0 0 1 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 8.14 0 99.83 0 2 NA Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 20 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 21 39874208 42869833 2 2 106 0 1 1 0 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 8.14 0 77.35 0 2 NA Whitelist PRAD-CA 0.68 0.14 0 0 0.64 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 22 NA NA 0 0 106 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0409 X 79518070 84229871 1 1 106 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 8.14 100 0 0 0 1 Whitelist PRAD-CA 0.62 0.15 NA NA 0.59 1 No PRAD-CA CPCG0409 PRAD 0.38 1.91 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51154 CPCG0409 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 1 188801922 234712805 1 3 116 3 0 0 0 0 0.03 0.08 1 0 0 NA NA NA NA NA NA 10.4 0 100 0 2 NA Whitelist PRAD-CA 0.41 0.24 0 0 0.33 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 2 NA NA 0 0 116 0 0 0 0 0 NA 0.4 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.65 0 NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 3 139922345 154928509 1 2 116 2 0 0 0 0 0.11 0.07 4 0 0 4 4 4 5 5 5 10.4 1.22 98.74 0 1 2 Whitelist PRAD-CA 0.54 0.2 0 0 0.48 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 4 170515521 174256929 3 7 116 1 1 1 0 4 0.8 0.01 6 0 0 6 3 6 13 9 13 10.4 5.63 94.35 0 2 1 Whitelist PRAD-CA 0.96 0.04 0 0 0.84 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 10 0.04 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 5 92635046 94023030 4 8 116 1 1 1 1 4 1 0 7 0 0 7 4 7 19 14 14 10.4 18.43 78.51 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 1 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 6 NA NA 0 0 116 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.58 0 NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 7 150753845 154780950 2 2 116 0 0 1 1 0 0.57 0.68 4 0 0 4 4 4 5 5 5 10.4 2.07 97.7 0 1 2 Whitelist PRAD-CA 0.68 0.88 0 0 0.64 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 8 38316307 38339641 1 1 116 1 0 0 0 0 0.39 0.53 1 0 NA NA NA NA 4 4 4 10.4 28.85 67.73 2 1 NA Whitelist PRAD-CA 0.62 0.76 0 NA 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 9 NA NA 0 0 116 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.84 NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 10 52183674 106116040 3 10 116 0 1 1 1 7 0.8 0 4 0 0 4 4 4 4 4 4 10.4 24.32 75.51 0 1 2 Whitelist PRAD-CA 12 0.86 0.01 0 0 0.84 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 13 0.06 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 11 102807567 103754830 4 4 116 3 1 0 0 0 0.11 0.66 1 0 0 NA NA NA NA NA NA 10.4 1.08 98.47 1 2 NA Whitelist PRAD-CA 0.54 0.87 0 0 0.48 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 12 12324339 123003530 3 11 116 0 0 1 2 8 0.3 0 6 0 0 6 6 6 7 7 7 10.4 18.72 81.19 0 1 2 Whitelist PRAD-CA 0.87 0 0 0 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 14 0.06 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 13 NA NA 0 0 116 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.69 NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 14 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 15 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 16 1658472 3008266 2 4 116 0 1 1 0 2 0.57 0 1 0.11 0 NA NA NA NA NA NA 10.4 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 0 0.11 0 0.64 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 17 NA NA 0 0 116 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.63 NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 18 72012724 75328196 1 1 116 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 10.4 0 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.63 NA NA 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 19 14066096 14124819 1 5 116 1 0 0 0 4 0.39 0.08 1 0 0 NA NA NA NA NA NA 10.4 0 99.83 0 2 NA Whitelist PRAD-CA 0.93 0.23 0 0 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 20 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 21 33686322 42840128 1 9 116 2 0 0 1 6 0.3 0 3 0 0 NA NA NA NA NA NA 10.4 0.42 76.93 0 2 1 Whitelist PRAD-CA 0.97 0 0 0 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 12 0.05 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 22 NA NA 0 0 116 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0410 X 30432700 80812255 3 5 116 2 0 1 0 2 0.3 0.39 3 0 0 NA NA NA NA NA NA 10.4 100 0 0 1 0 Whitelist PRAD-CA 0.62 0.64 0 0 0.59 0 No PRAD-CA CPCG0410 PRAD 0.36 1.89 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-CA DO51155 CPCG0410 male alive C61 no treatment 61 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 1 8603437 220072845 1 2 70 2 0 0 0 0 0.11 0.18 1 NA 0.04 NA NA NA NA NA NA 6.7 0 100 0 2 NA Whitelist PRAD-CA 0.54 0.39 NA 0.04 0.48 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 2 42188 159020294 1 8 70 2 0 0 0 6 0.11 0.19 1 0 0 NA NA NA NA NA NA 6.7 0 99.9 0 2 NA Whitelist PRAD-CA 0.54 0.41 0 0 0.48 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 3 71597532 176014477 1 13 70 3 1 2 2 5 0.8 0 1 0 0 NA NA NA NA NA NA 6.7 0 99.95 0 2 NA Whitelist PRAD-CA 0.8 0 0 0 0.84 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 21 0.15 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 4 71178308 71205795 1 1 70 0 1 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 6.7 0 99.9 0 2 NA Whitelist PRAD-CA 0.62 1 0 NA 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 5 158638287 164684567 1 1 70 0 0 1 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 6.7 0 99.86 0 2 NA Whitelist PRAD-CA 0.62 0.7 0 NA 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 6 147368410 153430580 1 3 70 2 0 0 0 1 0.11 0.31 1 0 0 NA NA NA NA NA NA 6.7 0 99.85 0 2 NA Whitelist PRAD-CA 0.41 0.57 0 0 0.48 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 7 29672649 29785504 1 1 70 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.7 0 99.77 0 2 NA Whitelist PRAD-CA 0.62 1 NA NA 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 8 17433236 128826347 1 6 70 0 1 1 0 4 0.57 0.09 1 0 0 NA NA NA NA NA NA 6.7 0 99.99 0 2 NA Whitelist PRAD-CA 0.68 0.25 0 0 0.64 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 8 0.06 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 9 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 10 89352689 90567137 1 3 70 1 0 0 0 2 0.39 0.26 4 0 0 4 4 4 5 5 5 6.7 0.9 98.93 0 1 2 Whitelist PRAD-CA 0.62 0.5 0 0 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 11 85914909 127168066 2 5 70 1 1 1 1 1 1 0.01 3 0 0 NA NA NA NA NA NA 6.7 0.01 99.56 0 2 1 Whitelist PRAD-CA 0.93 0.03 0 0 1 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 9 0.06 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 12 NA NA 0 0 70 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.51 NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 13 NA NA 0 0 70 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.02 0 NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 14 50236155 69218076 1 3 70 1 0 1 1 0 0.8 0.49 3 0 0 NA NA NA NA NA NA 6.7 0.58 83.5 0 2 1 Whitelist PRAD-CA 0.87 0.73 0 0 0.84 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 15 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 16 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 17 41440559 44991022 1 3 70 0 1 0 0 2 0.39 0.12 2 NA 0 NA NA NA NA NA NA 6.7 4.37 95.61 0 1 2 Whitelist PRAD-CA 0.62 0.31 NA 0 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 18 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 19 39245145 53396232 1 7 70 1 0 0 2 4 0.3 0 3 0 0 NA NA NA NA NA NA 6.7 0.14 99.68 0 2 1 Whitelist PRAD-CA 0.77 0 0 0 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 10 0.07 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 20 NA NA 0 0 70 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.87 NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 21 39884602 42855637 1 2 70 1 0 0 0 1 0.39 0.05 2 NA NA NA NA NA NA NA NA 6.7 6.17 71.18 0 1 2 Whitelist PRAD-CA 0.68 0.17 NA NA 0.59 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 22 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0411 X NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0411 PRAD 0.21 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51156 CPCG0411 male alive C61 no treatment 45 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 1 164265599 216899731 1 2 55 2 0 0 0 0 0.11 0.32 4 NA 0 4 4 4 5 5 5 17.53 0.35 99.65 0 1 2 Whitelist PRAD-CA 0.54 0.57 NA 0 0.48 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 2 221482410 236024472 2 2 55 0 0 1 1 0 0.57 0.22 1 0 0 NA NA NA NA NA NA 17.53 0 99.9 0 2 NA Whitelist PRAD-CA 0.68 0.46 0 0 0.64 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 3 65635230 66383710 1 2 55 1 0 0 0 1 0.39 1 3 NA NA NA NA NA 4 0 3 17.53 0.38 99.57 0 1 2 Whitelist PRAD-CA 0.68 1 NA NA 0.59 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 3 0.03 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 4 35697092 35740344 1 1 55 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 17.53 0.02 99.95 0 1 2 Whitelist PRAD-CA 0.62 0.4 NA NA 0.59 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 5 NA NA 0 0 55 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.5 NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 6 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 7 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 8 NA NA 0 0 55 0 0 0 0 0 NA 0.76 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.92 NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 9 NA NA 0 0 55 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.9 NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 10 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 11 30685891 119565687 23 24 55 7 3 7 6 1 0.6 0 19 0 0 19 16 19 19 16 16 17.53 12.79 86.78 0 1 2 Whitelist PRAD-CA 0.68 0 0 0 0.67 1 High confidence PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA Canonical without polyploidization 47 0.43 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 12 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 13 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 14 90047547 90206082 2 2 55 0 2 0 0 0 0.11 0.01 2 0 0 NA NA NA 4 4 4 17.53 31.67 67.42 0 1 2 Whitelist PRAD-CA 0.54 0.04 0 0 0.48 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 15 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 16 46944259 68233795 2 3 55 1 1 0 0 1 0.57 0.06 3 0 0 NA NA NA 4 4 4 17.53 47.02 52.87 0 1 2 Whitelist PRAD-CA 0.62 0.19 0 0 0.64 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 5 0.05 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 17 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 18 19831061 77333823 4 4 55 2 1 1 0 0 0.57 0.02 7 0 0 7 7 7 8 8 8 17.53 0.7 92.61 0 1 2 Whitelist PRAD-CA 0.68 0.07 0 0 0.64 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 8 0.07 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 20 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 21 39819733 42875181 1 1 55 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 5 5 17.53 39.71 37.64 0 1 2 Whitelist PRAD-CA 0.62 0.11 NA NA 0.59 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0412 X NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0412 PRAD 0.55 1.8 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51157 CPCG0412 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 1 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 2 131901630 160144420 2 2 55 2 0 0 0 0 0.11 0.81 4 0 0 4 4 4 5 5 5 8 9.92 89.98 0 1 2 Whitelist PRAD-CA 0.54 0.95 0 0 0.48 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 3 21798017 192035507 1 4 55 2 0 1 1 0 0.57 0.79 5 0 0 5 5 5 7 7 7 8 0.13 99.74 0 1 2 Whitelist PRAD-CA 0.68 0.95 0 0 0.64 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 8 0.07 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 4 46998237 118792341 1 2 55 2 0 0 0 0 0.11 0.59 1 NA 0 NA NA NA NA NA NA 8 0 99.8 0 2 NA Whitelist PRAD-CA 0.54 0.81 NA 0 0.48 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 5 28572732 82901949 16 16 55 3 4 4 5 0 0.92 0 27 0 0 27 23 27 27 23 23 8 8.99 90.87 0 2 1 Whitelist PRAD-CA 0.95 0 0 0 0.94 1 High confidence PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA Canonical without polyploidization 32 0.29 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 6 78236665 132881709 1 7 55 2 0 0 0 5 0.11 0.05 4 0 0 4 4 4 5 5 5 8 31.39 68.47 0 1 2 Whitelist PRAD-CA 0.47 0.15 0 0 0.48 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 9 0.08 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 7 33988144 34875994 2 2 55 0 0 1 1 0 0.57 0.54 1 0 0 NA NA NA NA NA NA 8 0 99.77 0 2 NA Whitelist PRAD-CA 0.68 0.77 0 0 0.64 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 8 43753197 61235850 1 1 55 0 1 0 0 0 0.39 0.76 1 NA NA NA NA NA NA NA NA 8 0 99.99 0 2 NA Whitelist PRAD-CA 0.62 0.92 NA NA 0.59 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 9 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 10 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 11 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 12 11900983 12870935 1 1 55 0 0 1 0 0 0.39 0.33 3 0.02 NA NA NA NA 5 5 5 8 0.73 99.19 0 1 2 Whitelist PRAD-CA 0.62 0.58 0.02 NA 0.59 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 13 33218997 33237789 1 1 55 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA NA NA NA 8 0.02 99.86 0 1 2 Whitelist PRAD-CA 0.62 0.9 NA NA 0.59 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 14 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 15 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 16 59535891 59824587 1 4 55 0 0 0 1 3 0.39 0 1 0 0 NA NA NA NA NA NA 8 0 99.9 0 2 NA Whitelist PRAD-CA 6 0.68 0.02 0 0 0.59 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 5 0.05 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 17 NA NA 0 0 55 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 1 NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 18 26153227 26713415 1 1 55 0 0 1 0 0 0.39 0.66 1 NA 0 NA NA NA NA NA NA 8 0 99.96 0 2 NA Whitelist PRAD-CA 0.62 0.87 NA 0 0.59 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 19 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 20 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 21 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 22 NA NA 0 0 55 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0413 X NA NA 0 0 55 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.76 NA NA NA 1 No PRAD-CA CPCG0413 PRAD 0.47 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51158 CPCG0413 male alive C61 no treatment 58 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 1 NA NA 0 0 12 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.48 NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 4 NA NA 0 0 12 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.41 NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 6 138302962 138661633 1 1 12 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 5.31 0.21 99.65 0 1 2 Whitelist PRAD-CA 0.62 0.76 NA NA 0.59 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 11 NA NA 0 0 12 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.68 NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 14 38713971 56378828 1 2 12 2 0 0 0 0 0.11 0.05 4 NA 0 4 4 4 6 5 6 5.31 10.16 86.13 0 1 2 Whitelist PRAD-CA 0.54 0.17 NA 0 0.48 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 4 0.17 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 15 NA NA 0 0 12 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.53 NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 17 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA 0.52 NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 21 19311079 19358579 1 3 12 1 0 0 0 2 0.39 0 4 0 0 4 4 4 5 5 5 5.31 0.04 77.31 0 1 2 Whitelist PRAD-CA 0.62 0 0 0 0.59 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 4 0.17 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-CA::CPCG0414 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-CA NA NA NA NA NA 0 No PRAD-CA CPCG0414 PRAD 0.44 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-CA DO51159 CPCG0414 male alive C61 no treatment 43 NA NA Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD CA 0 NA PRAD-UK::0006_CRUK_PC_0006 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 2 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 3 176210622 197506258 2 2 22 2 0 0 0 0 0.11 0.66 1 NA 0 NA NA NA NA NA NA 6.91 2.1 97.78 0 2 NA Whitelist PRAD-UK 0.54 0.87 NA 0 0.48 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 4 0.09 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 4 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 6 71202635 118986093 1 1 22 1 0 0 0 0 0.39 0.04 1 0 0 NA NA NA NA NA NA 6.91 0 99.88 0 2 NA Whitelist PRAD-UK 0.62 0.14 0 0 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 7 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 8 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 9 12840232 15927781 1 1 22 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 6.91 0 99.99 0 2 NA Whitelist PRAD-UK 0.62 0.17 NA NA 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 10 21968677 89964967 1 3 22 2 1 0 0 0 0.3 0.08 1 0 0 NA NA NA NA NA NA 6.91 0 99.93 0 2 NA Whitelist PRAD-UK 0.62 0.22 0 0 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 6 0.14 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 14 47762696 47800968 1 1 22 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 6.91 0 100 0 2 NA Whitelist PRAD-UK 0.62 0.75 NA NA 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 16 11246736 83747286 2 2 22 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 6.91 0 99.89 0 2 NA Whitelist PRAD-UK 0.68 0.01 0 0 0.64 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 4 0.09 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 17 861677 7763007 1 1 22 0 0 0 1 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 6.91 3.64 96.36 0 2 NA Whitelist PRAD-UK 0.62 0.7 NA NA 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 19 12380194 12465345 1 1 22 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 6.91 1.02 98.81 0 2 NA Whitelist PRAD-UK 0.62 0.21 NA NA 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 21 39867181 42877103 1 1 22 1 0 0 0 0 0.39 0.24 7 NA NA 7 7 7 9 9 9 6.91 0.41 76.95 0 2 1 Whitelist PRAD-UK 0.62 0.47 NA NA 0.59 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 2 0.05 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0006_CRUK_PC_0006 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0006_CRUK_PC_0006 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO48577 0006_CRUK_PC_0006 male alive C61 radiation therapy complete response 71 1362 1362 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 44.8 PRAD-UK::0007_CRUK_PC_0007 1 NA NA 0 0 36 0 0 0 0 0 NA 0.06 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.19 0 NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 2 158194882 190271150 7 7 36 2 0 3 2 0 0.44 0 1 0 0 NA NA NA NA NA NA 5.63 0 99.9 0 2 NA Whitelist PRAD-UK 0.68 0 0 0 0.64 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 14 0.19 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 3 67301104 72879510 2 2 36 0 1 0 1 0 0.57 0.74 1 0 0 NA NA NA NA NA NA 5.63 0 99.97 0 2 NA Whitelist PRAD-UK 0.68 0.91 0 0 0.64 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 4 0.06 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 4 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 5 NA NA 0 0 36 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.9 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 6 135369870 163845221 2 2 36 1 0 1 0 0 0.57 0.48 1 0 0 NA NA NA NA NA NA 5.63 0 99.75 0 2 NA Whitelist PRAD-UK 0.68 0.72 0 0 0.64 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 4 0.06 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 7 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 8 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 9 NA NA 0 0 36 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.17 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 10 NA NA 0 0 36 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.23 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 11 NA NA 0 0 36 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.88 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 12 115115176 116122665 1 3 36 1 0 0 0 2 0.39 0.24 1 NA 0 NA NA NA NA NA NA 5.63 0 99.92 0 2 NA Whitelist PRAD-UK 0.87 0.47 NA 0 0.59 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 4 0.06 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 14 NA NA 0 0 36 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.56 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 16 47792354 56458386 1 1 36 1 0 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 5.63 0 99.89 0 2 NA Whitelist PRAD-UK 0.62 0.84 NA NA 0.59 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 17 40074266 43156940 1 1 36 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5.63 0 100 0 2 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 19 NA NA 0 0 36 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.36 NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 21 39709242 43101228 1 6 36 1 1 0 0 4 0.57 0 3 0 0 NA NA NA NA NA NA 5.63 6.33 71.03 0 2 1 Whitelist PRAD-UK 0.93 0 0 0 0.64 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 8 0.11 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 22 39934022 40754237 1 1 36 1 0 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 5.63 0 76.22 0 2 NA Whitelist PRAD-UK 0.62 0.6 NA NA 0.59 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0007_CRUK_PC_0007 X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0007_CRUK_PC_0007 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36221 0007_CRUK_PC_0007 male alive C61 59 1547 1547 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 50.89 PRAD-UK::0008_CRUK_PC_0008 1 66167710 115253247 3 3 67 1 0 1 1 0 0.8 0.01 1 0 0 NA NA NA NA NA NA 5 0 99.68 0 2 NA Whitelist PRAD-UK 0.87 0.03 0 0 0.84 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 6 0.04 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 2 99290293 223804162 7 7 67 1 2 2 2 0 0.93 0.51 3 0 0 NA NA NA NA NA NA 5 0.6 99.3 0 2 15 Whitelist PRAD-UK 0.96 0.75 0 0 0.95 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 14 0.1 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 3 NA NA 0 0 67 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.84 NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 4 41287657 42479398 1 1 67 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 5 0 99.97 0 2 NA Whitelist PRAD-UK 0.62 0.84 NA NA 0.59 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 5 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 6 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 7 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 8 103227029 141462383 2 6 67 0 1 0 1 4 0.57 0 1 0 0 NA NA NA NA NA NA 5 0 99.87 0 2 NA Whitelist PRAD-UK 0.93 0.01 0 0 0.64 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 8 0.06 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 9 75146347 115480917 4 10 67 1 0 1 2 6 0.57 0 1 0 0 NA NA NA NA NA NA 5 0 99.96 0 2 NA Whitelist PRAD-UK 0.96 0 0 0 0.64 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 14 0.1 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 10 53792378 53851148 1 1 67 1 0 0 0 0 0.39 0.13 1 0 NA NA NA NA NA NA NA 5 0 99.83 0 2 NA Whitelist PRAD-UK 0.62 0.32 0 NA 0.59 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 11 NA NA 0 0 67 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.93 NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 12 78933280 79516785 1 1 67 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5 0 99.92 0 2 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 13 71956975 101788448 2 3 67 1 0 0 1 1 0.57 0 1 0 0 NA NA NA NA NA NA 5 0 100 0 2 NA Whitelist PRAD-UK 0.62 0 0 0 0.64 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 5 0.04 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 14 NA NA 0 0 67 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.37 NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 15 NA NA 0 0 67 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.3 NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 16 47523141 89847540 2 4 67 0 1 0 1 2 0.57 0.1 1 0 0 NA NA NA NA NA NA 5 0 99.89 0 2 NA Whitelist PRAD-UK 0.68 0.27 0 0 0.64 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 6 0.04 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 17 7256627 45972377 1 3 67 3 0 0 0 0 0.03 0.43 1 0 0 NA NA NA NA NA NA 5 0 99.99 0 2 NA Whitelist PRAD-UK 0.41 0.68 0 0 0.33 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 6 0.04 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 18 NA NA 0 0 67 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 19 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 20 17498886 17649803 1 1 67 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 5 0 99.84 0 2 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 21 38745260 42870499 3 3 67 0 1 2 0 0 0.3 0 1 0 0 NA NA NA NA NA NA 5 0 77.35 0 2 NA Whitelist PRAD-UK 0.62 0.01 0 0 0.59 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 6 0.04 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 22 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0008_CRUK_PC_0008 X NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0008_CRUK_PC_0008 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO36223 0008_CRUK_PC_0008 male alive C61 63 1632 1632 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 53.68 PRAD-UK::0056_CRUK_PC_0056 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.35 NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 4 NA NA 0 0 2 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.32 NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 19 35028602 35240293 1 1 2 0 0 1 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 5.29 0 99.83 0 2 NA Whitelist PRAD-UK 0.62 0.14 NA NA 0.59 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 2 0.5 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0056_CRUK_PC_0056 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0056_CRUK_PC_0056 PRAD 0.16 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO221503 0056_CRUK_PC_0056 male alive C61 54 1814 1814 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 59.67 PRAD-UK::0064_CRUK_PC_0064 1 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 2 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 3 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 4 NA NA 0 0 13 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.81 NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 5 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 6 86059356 88273597 2 2 13 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 7.39 0 99.85 0 2 NA Whitelist PRAD-UK 0.68 0.4 NA 0 0.64 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 4 0.15 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 7 NA NA 0 0 13 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.35 NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 8 89200749 140790340 1 1 13 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA 5 3 3 7.39 48.16 51.83 0 2 3 Whitelist PRAD-UK 0.62 0.33 NA NA 0.59 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 9 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 10 25261514 25304219 1 2 13 1 0 0 0 1 0.39 0.12 2 NA NA NA NA NA NA NA NA 7.39 0.02 99.89 0 1 2 Whitelist PRAD-UK 0.68 0.3 NA NA 0.59 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 3 0.12 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 11 NA NA 0 0 13 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.71 NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 12 11191068 132582259 1 4 13 3 1 0 0 0 0.11 0 5 0.04 0 5 3 5 5 3 3 7.39 0.36 99.56 0 2 1 Whitelist PRAD-UK 0.54 0.01 0.04 0 0.48 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 8 0.31 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 13 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 14 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 15 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 16 NA NA 0 0 13 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.15 NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 17 12267278 12479331 1 1 13 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 7.39 0.26 99.74 0 1 2 Whitelist PRAD-UK 0.62 0.55 NA NA 0.59 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 18 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 19 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 20 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 21 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 22 NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0064_CRUK_PC_0064 X NA NA 0 0 13 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0064_CRUK_PC_0064 PRAD 0.41 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50416 0064_CRUK_PC_0064 male alive C61 59 937 937 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 30.82 PRAD-UK::0065_CRUK_PC_0065 1 75879779 120025710 8 8 36 2 2 2 2 0 1 0 11 0 0 11 11 11 19 19 19 9.95 5.06 94.94 0 2 1 Whitelist PRAD-UK 1 0 0 0 1 1 High confidence PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA Canonical without polyploidization 16 0.22 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 2 NA NA 0 0 36 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.93 NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 3 27203160 193771532 7 7 36 1 1 4 1 0 0.28 0 10 0 0 10 10 10 15 15 15 9.95 8.24 91.73 0 1 2 Whitelist PRAD-UK 0.62 0 0 0 0.59 1 High confidence PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA Canonical without polyploidization 14 0.19 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 4 72178116 72195142 1 1 36 1 0 0 0 0 0.39 0.73 2 0 NA NA NA NA NA NA NA 9.95 0.01 99.97 0 1 2 Whitelist PRAD-UK 0.62 0.91 0 NA 0.59 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 5 81505399 111417916 2 2 36 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 9.95 0 99.88 0 2 NA Whitelist PRAD-UK 0.68 1 NA 0 0.64 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 4 0.06 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 6 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 7 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 8 111213267 111453853 1 1 36 1 0 0 0 0 0.39 0.71 2 NA NA NA NA NA 4 4 4 9.95 29.37 66.97 0 1 2 Whitelist PRAD-UK 0.62 0.9 NA NA 0.59 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 9 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 11 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 12 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 13 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 15 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 16 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 17 42270355 44127846 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.95 2.29 97.7 0 1 2 Whitelist PRAD-UK 0.62 1 NA NA 0.59 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 19 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 20 NA NA 0 0 36 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.77 NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 22 50913378 50925568 1 1 36 0 1 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 9.95 0 99.26 0 2 NA Whitelist PRAD-UK 0.62 0.6 NA NA 0.59 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0065_CRUK_PC_0065 X NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0065_CRUK_PC_0065 PRAD 0.56 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50422 0065_CRUK_PC_0065 male alive C61 61 1156 1156 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.03 PRAD-UK::0067_CRUK_PC_0067 1 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 2 114631959 126136351 6 6 83 1 1 2 2 0 0.88 0.23 9 0 0 9 9 9 15 12 12 8.37 8.69 91.2 0 2 1 Whitelist PRAD-UK 0.93 0.47 0 0 0.91 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 12 0.07 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 3 21978772 168757004 6 6 83 1 1 2 2 0 0.88 0.01 9 0 0 9 9 9 13 13 13 8.37 6.51 90.32 0 2 1 Whitelist PRAD-UK 0.93 0.04 0 0 0.91 1 High confidence PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA Canonical without polyploidization 12 0.07 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 4 23157660 118077801 1 2 83 2 0 0 0 0 0.11 0.18 1 NA 0 NA NA NA NA NA NA 8.37 0 99.99 0 2 NA Whitelist PRAD-UK 0.54 0.4 NA 0 0.48 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 5 99885668 128639412 2 2 83 0 0 1 1 0 0.57 0.49 4 0 0 4 4 4 7 7 7 8.37 15.82 84.17 0 1 2 Whitelist PRAD-UK 0.68 0.74 0 0 0.64 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 6 75975266 95082914 3 3 83 1 0 1 1 0 0.8 0.1 3 0 0 NA NA NA 9 9 9 8.37 10.77 89.1 0 2 1 Whitelist PRAD-UK 0.87 0.26 0 0 0.84 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 6 0.04 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 7 79044488 123857840 5 5 83 1 0 2 2 0 0.53 0.22 13 0 0 13 13 13 13 13 13 8.37 0.38 99.39 0 2 1 Whitelist PRAD-UK 0.68 0.45 0 0 0.64 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 10 0.06 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 8 64237001 88665512 4 16 83 0 1 3 0 12 0.11 0 11 0 0 11 11 11 15 15 15 8.37 0.31 99.68 0 1 2 Whitelist PRAD-UK 13 0.95 0 0 0 0.48 1 High confidence PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA Canonical without polyploidization 20 0.12 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 9 26921758 30071295 7 7 83 2 1 2 2 0 0.93 0.04 9 0 0 9 9 9 9 9 9 8.37 0.17 99.69 0 2 1 Whitelist PRAD-UK 0.96 0.15 0 0 0.95 1 High confidence PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA Canonical without polyploidization 14 0.08 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 10 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 11 21126444 22075179 4 4 83 1 1 1 1 0 1 0.44 4 0 0 4 4 4 5 5 5 8.37 0.36 99.21 0 1 2 Whitelist PRAD-UK 1 0.69 0 0 1 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 8 0.05 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 12 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 13 67945892 69823505 3 15 83 2 0 1 0 12 0.3 0 5 0 0 5 5 5 15 15 15 8.37 21.27 78.73 0 2 1 Whitelist PRAD-UK 8 0.62 0 0 0 0.59 1 Linked to high confidence PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA Canonical without polyploidization 18 0.11 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 14 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 15 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 16 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 17 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 18 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 19 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 20 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 21 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 22 NA NA 0 0 83 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0067_CRUK_PC_0067 X 142321476 142337978 1 1 83 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 8.37 100 0 0 1 NA Whitelist PRAD-UK 0.62 0.32 NA NA 0.59 1 No PRAD-UK 0067_CRUK_PC_0067 PRAD 0.8 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50421 0067_CRUK_PC_0067 male alive C61 66 1229 1229 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.43 PRAD-UK::0069_CRUK_PC_0069 1 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 2 NA NA 0 0 30 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.75 NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 3 47554336 120117964 1 7 30 1 0 1 1 4 0.8 0 5 0 0 5 5 5 5 5 5 6.67 11.92 87.98 0 2 1 Whitelist PRAD-UK 0.68 0 0 0 0.84 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 10 0.17 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 4 NA NA 0 0 30 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.9 NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 5 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 6 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 9 NA NA 0 0 30 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.29 NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 11 47561756 130781966 1 2 30 0 0 1 1 0 0.57 0.65 1 NA 0 NA NA NA NA NA NA 6.67 0 99.57 0 2 NA Whitelist PRAD-UK 0.68 0.86 NA 0 0.64 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 12 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 14 104046552 105246252 1 1 30 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 6.67 26.72 72.36 0 1 2 Whitelist PRAD-UK 0.62 0 0 NA 0.59 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 16 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 17 19412862 19674366 1 1 30 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 6.67 0.32 99.68 0 1 2 Whitelist PRAD-UK 0.62 0.79 NA NA 0.59 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 21 34001189 42862028 1 13 30 3 1 0 1 8 0.28 0 3 0 0 NA NA NA NA NA NA 6.67 0.01 77.35 0 2 4 Whitelist PRAD-UK 3 0.62 0 0 0 0.59 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 18 0.3 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0069_CRUK_PC_0069 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0069_CRUK_PC_0069 PRAD 0.41 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50423 0069_CRUK_PC_0069 male alive C61 64 1172 1172 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.55 PRAD-UK::0070_CRUK_PC_0070 1 205596168 205647581 3 3 58 0 0 2 1 0 0.3 0.01 1 0 0 NA NA NA 5 3 3 9.4 0.64 99.36 0 2 NA Whitelist PRAD-UK 0.62 0.03 0 0 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 2 8775831 181892904 1 7 58 4 0 0 0 3 0.01 0.06 7 0 0 7 7 7 7 7 7 9.4 0.88 99.03 0 2 1 Whitelist PRAD-UK 0.62 0.18 0 0 0.16 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 11 0.09 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 3 150443286 176748310 4 4 58 1 1 1 1 0 1 0.12 5 0 0 5 5 5 7 7 7 9.4 0.53 99.27 0 2 1 Whitelist PRAD-UK 1 0.31 0 0 1 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 8 0.07 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 4 41704828 41875085 1 1 58 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 9.4 0.09 99.91 0 1 2 Whitelist PRAD-UK 0.62 0.4 NA NA 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 5 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 6 87619003 90687807 1 1 58 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.4 1.79 98.06 0 1 2 Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 7 106800209 152109403 1 4 58 2 0 0 0 2 0.11 0.55 2 0 0 NA NA NA NA NA NA 9.4 0.43 99.34 0 1 2 Whitelist PRAD-UK 0.54 0.78 0 0 0.48 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 8 41689930 41793085 3 3 58 1 0 1 1 0 0.8 0.01 1 0 0 NA NA NA 4 4 4 9.4 28.54 67.35 0 1 NA Whitelist PRAD-UK 0.87 0.04 0 0 0.84 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 9 NA NA 0 0 58 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 10 130154012 130323926 2 2 58 0 0 1 1 0 0.57 0.75 1 0 0 NA NA NA NA NA NA 9.4 1.03 98.79 0 2 NA Whitelist PRAD-UK 0.68 0.92 0 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 11 94078324 100445514 2 2 58 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 9.4 0 99.57 0 2 NA Whitelist PRAD-UK 0.68 1 NA 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 12 4425218 18827294 2 2 58 0 0 1 1 0 0.57 0.75 3 0.47 0 NA NA NA 5 5 5 9.4 11.37 88.55 0 2 1 Whitelist PRAD-UK 0.68 0.92 0.47 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 13 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 14 51372531 90737410 2 3 58 0 0 1 1 1 0.57 0.11 2 0 0 NA NA NA 5 5 5 9.4 5.94 93.18 0 1 2 Whitelist PRAD-UK 0.62 0.28 0 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 15 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 16 76781325 80164399 4 6 58 0 1 2 1 2 0.57 0 3 0 0 NA NA NA NA NA NA 9.4 1 98.96 0 2 1 Whitelist PRAD-UK 0.62 0.02 0 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 10 0.09 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 17 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 18 2558561 5854075 1 1 58 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 9.4 79.58 14.99 0 1 2 Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 19 9683988 9948204 1 1 58 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.4 0.45 99.38 0 1 2 Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 20 15301580 15466563 2 2 58 0 0 1 1 0 0.57 0.36 1 NA 0 NA NA NA NA NA NA 9.4 0 99.03 0 2 NA Whitelist PRAD-UK 0.68 0.61 NA 0 0.64 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 21 39979559 42873200 1 1 58 1 0 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 9.4 6.01 71.34 0 1 2 Whitelist PRAD-UK 0.62 0.75 NA NA 0.59 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 22 NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0070_CRUK_PC_0070 X NA NA 0 0 58 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0070_CRUK_PC_0070 PRAD 0.65 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50424 0070_CRUK_PC_0070 male alive C61 57 1585 1585 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 52.14 PRAD-UK::0071_CRUK_PC_0071 1 44379525 207980374 4 8 62 2 1 0 1 4 0.57 0 5 0 0 5 3 5 9 7 7 8.31 2.22 97.78 0 2 1 Whitelist PRAD-UK 5 0.87 0.01 0 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 12 0.1 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 2 NA NA 0 0 62 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.19 NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 3 6905894 7814574 2 4 62 2 0 0 0 2 0.11 0.2 4 0.03 0 4 4 4 8 8 8 8.31 9.96 89.99 0 1 2 Whitelist PRAD-UK 0.54 0.43 0.03 0 0.48 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 4 88675093 89360283 2 4 62 1 0 1 0 2 0.57 1 4 0 0 4 4 4 5 5 5 8.31 0.32 99.66 0 1 2 Whitelist PRAD-UK 6 0.68 1 0 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 5 27362598 110869645 3 6 62 1 0 1 1 3 0.8 0.11 5 0 0 5 5 5 5 5 5 8.31 13.88 85.98 0 2 1 Whitelist PRAD-UK 0.93 0.29 0 0 0.84 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 9 0.07 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 6 5552007 7621446 1 2 62 1 0 0 1 0 0.57 0.79 4 0 0 4 4 4 7 7 7 8.31 2.14 97.71 0 1 2 Whitelist PRAD-UK 0.68 0.94 0 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 7 2496399 102032395 1 9 62 1 1 1 1 5 1 0.01 1 0 0 NA NA NA NA NA NA 8.31 0 99.78 0 2 NA Whitelist PRAD-UK 0.97 0.03 0 0 1 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 13 0.1 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 8 6225267 24996498 2 3 62 1 0 1 0 1 0.57 0.04 3 0 0 NA NA NA 7 7 7 8.31 16.66 82.86 0 1 2 Whitelist PRAD-UK 0.87 0.13 0 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 9 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 10 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 11 33062558 60907579 1 2 62 2 0 0 0 0 0.11 1 2 NA 0 NA NA NA NA NA NA 8.31 0.3 99.28 1 1 2 Whitelist PRAD-UK 0.54 1 NA 0 0.48 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 12 49728225 122253193 1 3 62 1 1 0 0 1 0.57 0.54 1 0 0 NA NA NA NA NA NA 8.31 0 99.92 0 2 NA Whitelist PRAD-UK 0.62 0.77 0 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 5 0.04 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 13 93806643 94023817 1 1 62 0 1 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 8.31 0 100 0 2 NA Whitelist PRAD-UK 0.62 0.9 NA NA 0.59 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 14 61113850 100821264 1 4 62 2 0 0 0 2 0.11 0.13 3 0 0 NA NA NA NA NA NA 8.31 1.04 98.05 0 2 1 Whitelist PRAD-UK 0.54 0.32 0 0 0.48 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 15 67590665 68117288 2 2 62 0 0 1 1 0 0.57 0.69 1 NA 0 NA NA NA NA NA NA 8.31 0 100 0 2 NA Whitelist PRAD-UK 0.68 0.89 NA 0 0.64 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 4 0.03 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 16 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 17 73756020 75124580 1 1 62 1 0 0 0 0 0.39 0.09 2 0.01 NA NA NA NA 5 5 5 8.31 6.8 93.18 0 1 2 Whitelist PRAD-UK 0.62 0.24 0.01 NA 0.59 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 18 NA NA 0 0 62 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.88 NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 19 NA NA 0 0 62 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 20 15304210 16489217 1 1 62 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.31 0 99.03 0 2 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 21 38548699 42867739 3 3 62 2 0 0 1 0 0.3 0.01 1 0 0 NA NA NA NA NA NA 8.31 0 77.35 0 2 NA Whitelist PRAD-UK 0.62 0.04 0 0 0.59 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 6 0.05 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 22 NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0071_CRUK_PC_0071 X NA NA 0 0 62 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0071_CRUK_PC_0071 PRAD 0.72 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50420 0071_CRUK_PC_0071 male alive C61 radiation therapy unknown 60 1425 1425 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.88 PRAD-UK::0072_CRUK_PC_0072 1 67986816 86784290 19 38 165 5 6 4 4 19 0.9 0 20 0 0 20 20 20 23 23 23 10.19 5.71 94.29 0 1 2 Whitelist PRAD-UK 0.87 0 0 0 0.92 1 High confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 57 0.17 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 2 61565323 171476492 2 2 165 1 0 1 0 0 0.57 0.01 3 0 0 NA NA NA NA NA NA 10.19 1.62 98.28 0 2 1 Whitelist PRAD-UK 0.68 0.05 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 3 60366143 62946726 3 3 165 1 0 1 1 0 0.8 1 4 0 0 4 4 4 11 11 11 10.19 3.16 96.7 0 1 2 Whitelist PRAD-UK 0.87 1 0 0 0.84 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 4 3129136 148497921 1 7 165 3 0 0 0 4 0.03 0.64 5 0 0.02 5 5 5 7 7 7 10.19 1.6 98.38 0 1 2 Whitelist PRAD-UK 0.77 0.85 0 0.02 0.33 1 Linked to high confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 10 0.03 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 5 132828628 134626478 1 4 165 1 0 1 0 2 0.57 0.04 1 0 0 NA NA NA NA NA NA 10.19 0 99.89 0 2 NA Whitelist PRAD-UK 0.54 0.13 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 6 76121444 109441646 2 5 165 1 0 1 0 3 0.57 0.25 4 0 0 4 3 4 5 3 3 10.19 0.23 99.62 0 2 1 Whitelist PRAD-UK 0.68 0.49 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 7 0.02 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 7 104365483 111070616 5 5 165 1 1 2 1 0 0.9 0.49 6 0 0 6 6 6 11 11 11 10.19 2.24 97.53 1 1 2 Whitelist PRAD-UK 0.93 0.73 0 0 0.92 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 8 12443102 41913983 8 12 165 3 1 2 2 4 0.8 0.03 10 0 0 10 10 10 15 15 15 10.19 10.27 89.72 0 1 2 Whitelist PRAD-UK 13 0.93 0.11 0 0 0.84 1 High confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 20 0.06 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 9 119445834 123592607 1 1 165 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 10.19 2.94 96.89 0 1 2 Whitelist PRAD-UK 0.62 0.09 NA NA 0.59 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 10 27291487 93614346 5 17 165 2 1 1 1 12 0.9 0 13 0 0 13 13 13 13 13 13 10.19 9.9 89.93 0 2 1 Whitelist PRAD-UK 0.93 0 0 0 0.92 1 High confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 22 0.07 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 11 24406667 25117168 2 2 165 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 10.19 1.87 97.7 0 2 NA Whitelist PRAD-UK 0.68 1 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 12 38382189 133229840 4 33 165 1 2 0 1 29 0.57 0 17 0 0 17 17 17 22 22 22 10.19 14.53 81.26 0 1 2 Whitelist PRAD-UK 1_4 0.97 0 0 0 0.64 1 High confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 37 0.11 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 13 34142528 82507264 2 2 165 0 0 1 1 0 0.57 0.02 4 0 0 4 4 4 9 9 9 10.19 52.92 47.08 0 1 2 Whitelist PRAD-UK 0.68 0.07 0 0 0.64 1 Linked to high confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 4 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 14 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 15 29755139 57517403 1 2 165 0 0 1 1 0 0.57 0.81 1 0 0 NA NA NA NA NA NA 10.19 0 99.87 0 2 NA Whitelist PRAD-UK 0.68 0.96 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 16 53443515 72674116 2 2 165 1 1 0 0 0 0.57 0.63 2 0 0 NA NA NA 5 5 5 10.19 8.98 90.93 0 1 2 Whitelist PRAD-UK 0.68 0.84 0 0 0.64 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 17 7873061 11882237 3 5 165 1 0 1 1 2 0.8 0 3 0 0 NA NA NA 5 5 5 10.19 3.96 96.04 0 2 1 Whitelist PRAD-UK 0.68 0.01 0 0 0.84 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 18 60747352 61026666 1 1 165 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 10.19 0.36 99.61 0 1 2 Whitelist PRAD-UK 0.62 0.34 NA NA 0.59 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 19 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 20 8732275 11599345 2 11 165 1 0 1 0 9 0.57 0 6 0 0 6 6 6 9 9 9 10.19 4.76 94.17 0 1 2 Whitelist PRAD-UK 10 0.62 0 0 0 0.64 1 Linked to high confidence PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA Canonical without polyploidization 13 0.04 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 21 39936312 42876482 1 1 165 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 10.19 6.11 71.24 0 1 2 Whitelist PRAD-UK 0.62 0.9 NA NA 0.59 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 22 NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0072_CRUK_PC_0072 X NA NA 0 0 165 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0072_CRUK_PC_0072 PRAD 0.59 1.88 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50415 0072_CRUK_PC_0072 male alive C61 radiation therapy unknown 61 1132 1132 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 37.24 PRAD-UK::0075_CRUK_PC_0075 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 2 NA NA 0 0 16 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.34 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 3 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 4 NA NA 0 0 16 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.24 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 5 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 6 NA NA 0 0 16 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.49 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 7 NA NA 0 0 16 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.44 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 9 137007438 138066052 1 1 16 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA 4 3 4 5.33 2.24 94.67 0 2 NA Whitelist PRAD-UK 0.62 0.09 NA NA 0.59 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 2 0.06 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 10 NA NA 0 0 16 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.76 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 12 NA NA 0 0 16 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.39 NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 15 43766488 43919570 1 1 16 1 0 0 0 0 0.39 0.36 2 NA NA NA NA NA NA NA NA 5.33 0.15 99.85 0 1 2 Whitelist PRAD-UK 0.62 0.62 NA NA 0.59 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 2 0.06 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 17 40076243 43333130 1 3 16 1 0 1 0 1 0.57 0 5 0 0 5 5 5 7 7 7 5.33 4.25 95.73 0 1 2 Whitelist PRAD-UK 0.87 0 0 0 0.64 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 5 0.16 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 18 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 21 39925826 42868956 1 1 16 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 5.33 6.11 71.24 0 1 2 Whitelist PRAD-UK 0.62 0.4 NA NA 0.59 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 2 0.06 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0075_CRUK_PC_0075 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0075_CRUK_PC_0075 PRAD 0.41 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50417 0075_CRUK_PC_0075 male alive C61 49 1376 1376 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.26 PRAD-UK::0077_CRUK_PC_0077 1 148930966 248810132 45 45 198 12 10 11 12 0 0.97 0 78 0 0 78 53 56 80 53 56 14.23 6.37 93.46 8 2 5 Whitelist PRAD-UK 0.98 0 0 0 0.98 0 High confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA With other complex events 90 0.23 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 2 34203351 199138381 1 8 198 6 0 0 0 2 0 0.2 10 0 0 10 10 10 13 13 13 14.23 8.44 91.45 0 1 2 Whitelist PRAD-UK 5 0.06 0.42 0 0 0.03 0 Linked to high confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA Canonical without polyploidization 14 0.04 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 3 93600037 147893785 1 3 198 2 0 1 0 0 0.3 0.01 8 0 0 8 7 8 10 8 10 14.23 27.75 69.11 0 3 1 Whitelist PRAD-UK 0.62 0.05 0 0 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 4 32778170 136168076 9 13 198 4 3 1 1 4 0.39 0.03 28 0 0 28 16 28 33 19 19 14.23 19.39 78.23 0 1 2 Whitelist PRAD-UK 5 0.99 0.12 0 0 0.59 0 High confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA With other complex events 22 0.06 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 5 46053227 172902121 5 15 198 1 1 3 0 10 0.28 0 22 0 0 22 16 22 25 19 19 14.23 29.86 70.02 0 2 1 Whitelist PRAD-UK 2_4 0.65 0 0 0 0.59 0 High confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA Canonical without polyploidization 20 0.05 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 6 697961 127720347 7 10 198 1 1 2 3 3 0.67 0.66 13 0 0 13 9 13 15 9 9 14.23 31.82 68.04 0 2 1 Whitelist PRAD-UK 12 0.96 0.86 0 0 0.74 0 High confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA Canonical without polyploidization 17 0.04 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 7 83605465 87517706 3 3 198 1 0 1 1 0 0.8 0.34 6 0 0 6 6 6 9 9 9 14.23 1.44 98.33 0 1 2 Whitelist PRAD-UK 0.87 0.59 0 0 0.84 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 8 50216666 93610639 6 6 198 2 2 1 1 0 0.88 0 9 0 0 9 9 9 25 20 20 14.23 23.45 76.54 0 2 1 Whitelist PRAD-UK 0.93 0 0 0 0.91 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 False positive; manually removed PRAD-UK::0077_CRUK_PC_0077 9 140293976 140561199 1 1 198 0 0 0 1 0 0.39 0.03 2 NA NA NA NA NA 6 6 6 14.23 0.31 99.2 0 1 2 Whitelist PRAD-UK 0.62 0.1 NA NA 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 10 NA NA 0 0 198 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.25 0 NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 11 NA NA 0 0 198 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.14 0 NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 12 10457601 23828590 7 9 198 3 1 1 2 2 0.67 0.31 7 0 0 7 7 7 7 7 7 14.23 1.49 98.43 0 2 1 Whitelist PRAD-UK 6 0.97 0.57 0 0 0.74 0 High confidence PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA Canonical without polyploidization 16 0.04 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 13 44523108 58662486 6 6 198 2 0 3 1 0 0.34 0.11 11 0 0 11 11 11 11 11 11 14.23 9.78 90.22 0 2 1 Whitelist PRAD-UK 0.62 0.29 0 0 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 12 0.03 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 14 NA NA 0 0 198 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.09 NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 15 64570871 64925093 1 1 198 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 14.23 0.35 99.5 0 1 2 Whitelist PRAD-UK 0.62 0.63 NA NA 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 16 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 17 NA NA 0 0 198 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.41 NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 18 NA NA 0 0 198 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.21 NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 19 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 20 52304428 52659443 1 1 198 0 1 0 0 0 0.39 0.45 2 NA 0 NA NA NA NA NA NA 14.23 0.56 98.46 0 2 3 Whitelist PRAD-UK 0.62 0.7 NA 0 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 21 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 22 NA NA 0 0 198 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0077_CRUK_PC_0077 X 87994155 143163100 2 4 198 0 0 2 2 0 0.26 0.42 1 0 0 NA NA NA NA NA NA 14.23 99.83 0.17 0 1 NA Whitelist PRAD-UK 0.62 0.67 0 0 0.59 0 No PRAD-UK 0077_CRUK_PC_0077 PRAD 0.68 1.89 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-UK DO50418 0077_CRUK_PC_0077 male alive C61 other therapy unknown 66 1236 1236 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 40.66 PRAD-UK::0078_CRUK_PC_0078 1 215317566 216071787 2 3 95 1 0 1 0 1 0.57 0.34 1 0 0 NA NA NA NA NA NA 10.12 1.76 98.24 0 2 NA Whitelist PRAD-UK 0.87 0.59 0 0 0.64 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 5 0.03 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 2 124499423 186179873 6 6 95 2 1 1 2 0 0.88 1 2 0 0 NA NA NA NA NA NA 10.12 18.23 81.68 0 1 2 Whitelist PRAD-UK 0.93 1 0 0 0.91 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 12 0.06 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 3 325885 82305905 5 5 95 1 1 1 2 0 0.9 0.1 3 0 0 NA NA NA 5 5 5 10.12 0.48 99.38 0 2 1 Whitelist PRAD-UK 0.93 0.27 0 0 0.92 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 10 0.05 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 4 32885214 180841057 3 11 95 3 2 1 0 5 0.34 0 21 0 0 21 21 21 21 21 21 10.12 1.95 98.03 0 2 1 Whitelist PRAD-UK 0.87 0 0 0 0.59 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 17 0.09 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 False positive; manually removed PRAD-UK::0078_CRUK_PC_0078 5 7691100 86110720 1 4 95 3 1 0 0 0 0.11 0.53 1 0 0 NA NA NA NA NA NA 10.12 0 99.85 0 2 NA Whitelist PRAD-UK 0.54 0.76 0 0 0.48 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 8 0.04 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 6 65420535 68499452 2 2 95 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 11 11 11 10.12 8.82 90.94 0 2 NA Whitelist PRAD-UK 0.68 0 0 0 0.64 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 7 62443950 79296253 1 1 95 0 0 0 1 0 0.39 0.49 1 NA NA NA NA NA NA NA NA 10.12 0 99.77 0 2 NA Whitelist PRAD-UK 0.62 0.74 NA NA 0.59 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 8 83404164 132375953 1 6 95 4 0 0 2 0 0.06 0.15 8 0 0 8 8 8 11 11 11 10.12 28.53 68.04 0 1 2 Whitelist PRAD-UK 0.54 0.36 0 0 0.48 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 12 0.06 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 9 31660745 32065833 1 2 95 1 0 0 1 0 0.57 0.59 1 NA 0 NA NA NA NA NA NA 10.12 0 99.3 0 2 NA Whitelist PRAD-UK 0.68 0.81 NA 0 0.64 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 10 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 11 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 12 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 13 68898592 68957679 1 1 95 1 0 0 0 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 10.12 0 85.85 0 2 NA Whitelist PRAD-UK 0.62 0.63 NA NA 0.59 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 14 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 15 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 16 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 17 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 18 3216829 3547118 1 1 95 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 10.12 0.42 99.53 0 2 3 Whitelist PRAD-UK 0.62 0.76 NA NA 0.59 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 19 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 20 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 21 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 22 NA NA 0 0 95 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0078_CRUK_PC_0078 X 128176254 144458883 2 2 95 2 0 0 0 0 0.11 0.48 1 0 0 NA NA NA NA NA NA 10.12 100 0 0 1 NA Whitelist PRAD-UK 0.54 0.73 0 0 0.48 0 No PRAD-UK 0078_CRUK_PC_0078 PRAD 0.28 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-UK DO50419 0078_CRUK_PC_0078 male alive C61 radiation therapy unknown 66 1395 1395 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 45.89 PRAD-UK::0080_CRUK_PC_0080 1 75322492 247333753 1 2 4 0 1 1 0 0 0.57 0.03 1 NA 0 NA NA NA NA NA NA 4.95 0 100 0 2 NA Whitelist PRAD-UK 0.68 0.12 NA 0 0.64 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.5 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 2 NA NA 0 0 4 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.54 NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 6 NA NA 0 0 4 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.45 NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 11 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.39 NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0080_CRUK_PC_0080 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0080_CRUK_PC_0080 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50414 0080_CRUK_PC_0080 male alive C61 44 1301 1301 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 42.8 PRAD-UK::0082_CRUK_PC_0082 1 55748556 214787977 16 17 128 6 5 3 2 1 0.48 0.03 1 0 0 NA NA NA NA NA NA 10.13 0 100 0 2 NA Whitelist PRAD-UK 0.62 0.11 0 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 33 0.13 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 2 66402508 207048065 1 4 128 1 1 0 0 2 0.57 0.87 4 0 0 4 3 4 9 5 5 10.13 2.48 97.42 0 2 1 Whitelist PRAD-UK 0.62 1 0 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 3 30056206 71036778 1 2 128 1 1 0 0 0 0.57 0.01 4 NA 0 4 3 4 5 3 3 10.13 4.49 95.46 0 2 1 Whitelist PRAD-UK 0.68 0.04 NA 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 4 92949877 93029624 1 3 128 1 0 0 0 2 0.39 0.05 1 NA 0 NA NA NA NA NA NA 10.13 0 99.79 0 2 NA Whitelist PRAD-UK 0.62 0.16 NA 0 0.59 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 5 52422766 101604452 4 9 128 2 1 0 1 5 0.57 0.14 8 0 0 8 6 8 11 6 6 10.13 15.33 84.53 0 1 2 Whitelist PRAD-UK 0.54 0.34 0 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 6 2865588 18891521 7 21 128 2 1 2 2 14 0.93 0 14 0 0 14 14 14 19 19 19 10.13 41.47 58.38 0 1 2 Whitelist PRAD-UK 10 0.76 0 0 0 0.95 1 High confidence PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA Canonical without polyploidization 28 0.11 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 7 21280976 76765208 5 7 128 2 2 1 0 2 0.53 0.11 1 0 0 NA NA NA NA NA NA 10.13 0 99.78 0 2 NA Whitelist PRAD-UK 0.68 0.29 0 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 12 0.05 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 8 35051242 35096954 1 1 128 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 13 13 13 10.13 10.9 89.1 0 2 NA Whitelist PRAD-UK 0.62 0 0 NA 0.59 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 9 10436777 10452920 1 1 128 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 10.13 0 99.3 0 2 NA Whitelist PRAD-UK 0.62 0.2 NA NA 0.59 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 10 59502181 102770426 17 22 128 3 1 7 6 5 0.15 0 24 0 0 24 16 24 28 18 18 10.13 3.64 96.18 0 1 2 Whitelist PRAD-UK 0.62 0 0 0 0.59 1 High confidence PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA Canonical without polyploidization 39 0.15 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 11 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 12 22618238 30694332 1 2 128 1 1 0 0 0 0.57 1 3 0 0 NA NA NA NA NA NA 10.13 0.15 99.77 0 2 1 Whitelist PRAD-UK 0.68 1 0 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 13 33877218 34459192 1 1 128 1 0 0 0 0 0.39 0.81 2 NA NA NA NA NA NA NA NA 10.13 0.51 99.49 0 1 2 Whitelist PRAD-UK 0.62 0.95 NA NA 0.59 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 14 52285417 107001213 2 14 128 1 0 0 1 12 0.57 0 5 0 0 5 5 5 5 5 5 10.13 2.11 97.57 0 2 1 Whitelist PRAD-UK 6 0.81 0 0 0 0.64 1 Linked to high confidence PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA Canonical without polyploidization 16 0.06 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 15 40118166 45806222 2 2 128 1 0 1 0 0 0.57 0.59 1 NA 0 NA NA NA NA NA NA 10.13 0 100 0 2 NA Whitelist PRAD-UK 0.68 0.81 NA 0 0.64 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 16 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 17 49195200 50189903 1 2 128 2 0 0 0 0 0.11 0.59 1 NA 0 NA NA NA NA NA NA 10.13 0 99.98 0 2 NA Whitelist PRAD-UK 0.54 0.81 NA 0 0.48 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 18 55835083 55855310 1 1 128 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 10.13 0 99.95 0 2 NA Whitelist PRAD-UK 0.62 0.51 NA NA 0.59 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 19 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 20 NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 21 39894083 42867744 1 2 128 2 0 0 0 0 0.11 0.67 4 NA 0 4 4 4 6 5 5 10.13 12.98 64.37 0 1 2 Whitelist PRAD-UK 0.54 0.87 NA 0 0.48 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 22 NA NA 0 0 128 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.42 NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0082_CRUK_PC_0082 X NA NA 0 0 128 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0082_CRUK_PC_0082 PRAD 0.57 1.88 Prost-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577547_A_C,CN:2 2 PRAD-UK DO50430 0082_CRUK_PC_0082 male alive C61 other therapy unknown 54 652 652 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 21.45 PRAD-UK::0089_CRUK_PC_0089 1 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 2 213374296 213963628 1 1 52 0 1 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 17.59 0 99.89 0 2 NA Whitelist PRAD-UK 0.62 0.57 NA NA 0.59 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 3 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 4 101808975 102181646 2 2 52 0 0 1 1 0 0.57 0.16 1 0 0 NA NA NA 5 5 5 17.59 0.71 99.27 0 2 NA Whitelist PRAD-UK 0.68 0.37 0 0 0.64 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 4 0.04 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 5 NA NA 0 0 52 0 0 0 0 0 NA 1 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 6 81197888 127781306 10 10 52 1 5 2 2 0 0.31 0 18 0 0 18 18 18 21 21 21 17.59 15.05 84.8 0 1 2 Whitelist PRAD-UK 0.62 0 0 0 0.59 1 High confidence PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA Canonical without polyploidization 20 0.19 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 7 NA NA 0 0 52 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.76 NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 8 141488238 141773705 1 1 52 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 17.59 96.44 0 0 3 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 9 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 10 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 11 103634542 133363653 6 6 52 1 1 2 2 0 0.88 0 10 0 0 10 6 10 12 7 8 17.59 49 50.57 0 3 1 Whitelist PRAD-UK 0.93 0 0 0 0.91 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 12 0.12 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 12 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 13 19665581 31750172 5 9 52 1 2 1 1 4 0.9 0 17 0 0 17 8 12 18 8 8 17.59 96.28 3.72 0 2 3 Whitelist PRAD-UK 0.62 0 0 0 0.92 1 High confidence PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA With other complex events 14 0.13 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 14 36823876 38115785 1 1 52 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 17.59 1.2 97.88 0 2 3 Whitelist PRAD-UK 0.62 1 NA NA 0.59 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 15 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 16 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 17 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 18 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 19 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 20 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 21 NA NA 0 0 52 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 22 38035594 38733960 2 3 52 1 0 0 1 1 0.57 0 3 0 0 NA NA NA 8 3 4 17.59 90.17 9.83 0 3 2 Whitelist PRAD-UK 13 0.87 0 0 0 0.64 1 Linked to high confidence PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA With other complex events 5 0.05 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0089_CRUK_PC_0089 X 6790676 6803560 1 1 52 1 0 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 17.59 100 0 0 1 NA Whitelist PRAD-UK 0.62 0.76 NA NA 0.59 1 No PRAD-UK 0089_CRUK_PC_0089 PRAD 0.74 1.92 Prost-AdenoCA NA 2 0.02 NA 2 PRAD-UK DO50428 0089_CRUK_PC_0089 male alive C61 72 1423 1423 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 46.81 PRAD-UK::0090_CRUK_PC_0090 1 208976112 241250815 2 2 194 2 0 0 0 0 0.11 0.06 4 0 0 4 3 4 7 4 4 14.79 12.96 87.03 0 1 0 Whitelist PRAD-UK 0.54 0.19 0 0 0.48 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 2 34548278 165627482 1 6 194 2 2 0 0 2 0.26 0.01 3 0 0 NA NA NA NA NA NA 14.79 0.49 99.42 0 2 1 Whitelist PRAD-UK 13 0.54 0.06 0 0 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 3 20407871 82149857 2 6 194 0 0 2 2 2 0.26 0.57 6 0 0 6 6 6 9 9 9 14.79 8.18 91.79 0 1 2 Whitelist PRAD-UK 0.93 0.8 0 0 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 4 67524856 158414913 25 25 194 5 5 7 8 0 0.78 0 22 0 0 22 14 14 34 24 24 14.79 13.04 86.79 5 2 1 Whitelist PRAD-UK 0.87 0 0 0 0.84 0 High confidence PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA Canonical without polyploidization 50 0.13 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 5 41539060 97372926 8 8 194 1 3 2 2 0 0.8 0.01 7 0 0 7 7 7 17 17 17 14.79 3.33 96.55 0 2 1 Whitelist PRAD-UK 0.87 0.03 0 0 0.84 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 16 0.04 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 False positive; manually removed PRAD-UK::0090_CRUK_PC_0090 6 135856209 160302084 4 4 194 0 0 2 2 0 0.26 0.88 4 0 0 4 4 4 15 15 15 14.79 20.83 78.99 0 1 2 Whitelist PRAD-UK 0.62 1 0 0 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 7 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 8 4593970 79446086 14 15 194 3 2 6 3 1 0.46 0 16 0 0 16 9 14 29 9 24 14.79 98.96 1.03 4 3 2 Whitelist PRAD-UK 0.73 0 0 0 0.64 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 29 0.07 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 False positive; manually removed PRAD-UK::0090_CRUK_PC_0090 9 NA NA 0 0 194 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.04 NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 10 85638272 111062616 1 4 194 1 0 1 0 2 0.57 0.39 5 0 0 5 5 5 7 7 7 14.79 2.18 97.64 0 2 1 Whitelist PRAD-UK 4 1 0.64 0 0 0.64 0 Linked to high confidence PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA Canonical without polyploidization 6 0.02 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 11 90271061 99662500 10 12 194 2 3 3 2 2 0.94 0.06 5 0 0 5 5 5 5 5 5 14.79 0.01 99.55 0 2 1 Whitelist PRAD-UK 4 0.93 0.18 0 0 0.96 0 Linked to high confidence PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA Canonical without polyploidization 22 0.06 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 12 4134323 74087961 31 32 194 6 9 8 8 1 0.89 0 24 0 0 24 12 13 28 13 15 14.79 3.24 96.68 0 2 1 Whitelist PRAD-UK 0.92 0 0 0 0.92 0 High confidence PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA With other complex events 63 0.16 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 13 56685617 67403188 2 4 194 0 0 2 2 0 0.26 0.23 5 0 0 5 5 5 9 9 9 14.79 0.77 99.23 0 2 1 Whitelist PRAD-UK 0.62 0.47 0 0 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 8 0.02 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 14 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 15 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 16 46386596 90072747 2 2 194 1 0 1 0 0 0.57 0.5 4 0 0 4 4 4 4 4 4 14.79 37.44 62.15 0 1 2 Whitelist PRAD-UK 0.68 0.74 0 0 0.64 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 17 72414161 75216830 1 1 194 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 14.79 3.45 96.55 0 2 3 Whitelist PRAD-UK 0.62 0.21 NA NA 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 18 64884132 64929252 1 1 194 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 14.79 0.06 99.91 0 1 2 Whitelist PRAD-UK 0.62 0.21 NA NA 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 19 NA NA 0 0 194 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.41 NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 20 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 21 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 22 NA NA 0 0 194 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0090_CRUK_PC_0090 X 82743869 82777329 1 1 194 1 0 0 0 0 0.39 0.14 1 0 NA NA NA NA NA NA NA 14.79 100 0 0 1 NA Whitelist PRAD-UK 0.62 0.33 0 NA 0.59 0 No PRAD-UK 0090_CRUK_PC_0090 PRAD 0.21 1.92 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO50432 0090_CRUK_PC_0090 male alive C61 radiation therapy unknown 71 1057 1057 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 34.77 PRAD-UK::0091_CRUK_PC_0091 1 166331375 177156264 10 10 308 3 1 3 3 0 0.75 0.11 17 0 0 17 17 17 29 29 29 83.97 80.72 19.28 0 4 2 Whitelist PRAD-UK 0.86 0.29 0 0 0.83 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 20 0.03 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 False positive; manually removed PRAD-UK::0091_CRUK_PC_0091 2 52999713 216640063 1 13 308 4 0 2 0 7 0.06 0.04 14 0 0 14 12 14 15 13 15 83.97 99.23 0.66 3 4 2 Whitelist PRAD-UK 5 0.62 0.14 0 0 0.48 0 Linked to high confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 19 0.03 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 3 69780654 86522449 21 22 308 7 4 5 5 1 0.82 0 27 0 0 27 23 27 33 25 25 83.97 95.26 4.61 0 4 2 Whitelist PRAD-UK 0.89 0.01 0 0 0.87 0 Linked to low confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 43 0.07 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 False positive; manually removed PRAD-UK::0091_CRUK_PC_0091 4 10474819 45859032 2 15 308 0 0 1 1 13 0.57 0.07 23 0 0 23 17 18 30 18 19 83.97 94.13 5.85 0 2 4 Whitelist PRAD-UK 8 0.99 0.2 0 0 0.64 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 17 0.03 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 5 654406 92191496 12 12 308 1 2 4 5 0 0.34 0 23 0 0 23 21 23 45 21 24 83.97 78.7 18.61 0 4 2 Whitelist PRAD-UK 0.62 0.01 0 0 0.59 0 High confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 24 0.04 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 6 62098623 120583866 5 9 308 1 1 2 1 4 0.9 0.72 12 0 0 12 5 6 13 5 6 83.97 99.84 0.01 0 1 0 Whitelist PRAD-UK 0.68 0.9 0 0 0.92 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 14 0.02 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 7 82954981 145981427 10 10 308 2 2 3 3 0 0.94 0.16 26 0 0 26 9 17 31 9 19 83.97 91.1 8.68 0 4 2 Whitelist PRAD-UK 0.96 0.37 0 0 0.96 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 20 0.03 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 False positive; manually removed PRAD-UK::0091_CRUK_PC_0091 8 1748311 14207672 2 19 308 2 1 0 1 15 0.57 0 18 0 0 18 14 18 33 14 16 83.97 77.6 18.98 0 2 4 Whitelist PRAD-UK 4 0.62 0 0 0 0.64 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 23 0.04 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 9 11930908 32046895 4 4 308 1 1 1 1 0 1 0.66 4 0 0 4 4 4 14 7 14 83.97 94.07 5.76 0 2 4 Whitelist PRAD-UK 1 0.87 0 0 1 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 10 26164992 131456723 2 4 308 0 0 2 2 0 0.26 0.22 10 0 0 10 4 10 11 4 4 83.97 99.82 0 1 3 4 Whitelist PRAD-UK 0.62 0.45 0 0 0.59 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 11 3944706 132738959 10 10 308 3 2 3 2 0 0.94 1 15 0 0 15 15 15 15 15 15 83.97 99.2 0.37 0 4 2 Whitelist PRAD-UK 0.96 1 0 0 0.96 0 High confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 20 0.03 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 12 4404224 14760891 4 9 308 1 1 1 1 5 1 0.42 8 0 0 8 8 8 11 9 9 83.97 93.62 6.3 0 2 4 Whitelist PRAD-UK 13 0.68 0.67 0 0 1 0 High confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 13 0.02 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 13 61651222 91504852 23 30 308 4 6 7 6 7 0.84 0 34 0 0 34 25 34 59 43 50 83.97 58.62 41.38 0 2 4 Whitelist PRAD-UK 12 1 0 0 0 0.88 0 High confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Before polyploidization 53 0.09 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 14 53847168 54811452 2 2 308 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 83.97 99.09 0 0 4 NA Whitelist PRAD-UK 0.68 0.04 NA 0 0.64 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 4 0.01 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 15 24409187 24797304 1 1 308 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 83.97 100 0 0 4 NA Whitelist PRAD-UK 0.62 0.06 NA NA 0.59 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 16 NA NA 0 0 308 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.62 NA NA NA 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 17 NA NA 0 0 308 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 18 8673012 67370977 11 13 308 5 1 3 2 2 0.36 0 8 0 0 8 5 7 9 5 5 83.97 84.71 15.26 0 2 0 Whitelist PRAD-UK 3 0.68 0 0 0 0.59 0 Low confidence PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA Canonical without polyploidization 24 0.04 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 19 NA NA 0 0 308 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 20 13990060 14587712 1 1 308 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 83.97 99.03 0 0 4 5 Whitelist PRAD-UK 0.62 0.07 NA NA 0.59 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 21 NA NA 0 0 308 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 22 NA NA 0 0 308 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::0091_CRUK_PC_0091 X 3412862 6186825 1 2 308 0 1 0 0 1 0.39 0.03 1 0.03 NA NA NA NA 7 7 7 83.97 0.01 99.99 0 2 NA Whitelist PRAD-UK 0.54 0.1 0.03 NA 0.59 0 No PRAD-UK 0091_CRUK_PC_0091 PRAD 0.86 3.7 Prost-AdenoCA NA 3 0 NA 4 PRAD-UK DO50431 0091_CRUK_PC_0091 male alive C61 other therapy unknown 65 1185 1185 Smoking history not documented NA Don't know/Not sure Not Documented Included Prost-AdenoCA PRAD UK 1 38.98 PRAD-UK::A10-0015_CRUK_PC_0015 1 149781202 155977717 4 4 547 1 3 0 0 0 0.11 0.94 7 0 0 7 6 7 52 20 20 26.95 14.16 85.52 0 2 3 Whitelist PRAD-UK 0.54 1 0 0 0.48 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 2 163214471 184193586 10 12 547 1 4 3 2 2 0.57 0.08 19 0 0 19 5 12 58 21 21 26.95 16.06 81.26 0 3 2 Whitelist PRAD-UK 0.68 0.22 0 0 0.64 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 22 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 3 144682972 149059253 4 4 547 0 4 0 0 0 0.01 0.74 3 0 0 NA NA NA 52 17 17 26.95 20.52 76.33 0 2 3 Whitelist PRAD-UK 0.21 0.91 0 0 0.16 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 4 101850198 102712351 4 4 547 0 4 0 0 0 0.01 0 3 0 0 NA NA NA 46 18 26 26.95 64.37 32.83 0 3 4 Whitelist PRAD-UK 0.21 0.01 0 0 0.16 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 5 98587330 101465048 3 4 547 1 1 1 0 1 0.8 0.04 5 0 0 5 5 5 52 22 22 26.95 12.06 84.86 0 2 3 Whitelist PRAD-UK 1 0.15 0 0 0.84 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 7 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 6 142821351 145319374 2 2 547 0 2 0 0 0 0.11 0.53 1 0 0 NA NA NA 45 28 28 26.95 15.58 84.13 0 2 NA Whitelist PRAD-UK 0.54 0.76 0 0 0.48 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 4 0 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 7 86493963 94224432 5 5 547 0 5 0 0 0 0 0.39 7 0 0 7 5 7 43 15 15 26.95 16.71 83.26 0 3 2 Whitelist PRAD-UK 0.1 0.64 0 0 0.07 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 8 69055456 75098179 3 3 547 0 3 0 0 0 0.03 0.12 8 0 0 8 3 5 47 10 17 26.95 61.52 38.16 0 6 5 Whitelist PRAD-UK 0.41 0.3 0 0 0.33 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 9 1409842 138981764 1 20 547 1 17 1 1 0 0 1 23 0 0 23 23 23 23 23 23 26.95 7.9 91.95 0 2 3 Whitelist PRAD-UK 0 1 0 0 0 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 40 0.04 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 10 129033501 129435608 5 5 547 0 4 0 1 0 0.04 0.47 1 0 0 NA NA NA 27 7 7 26.95 87.66 12.27 0 1 NA Whitelist PRAD-UK 0.45 0.72 0 0 0.36 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 11 2176926 134862526 1 21 547 0 15 0 0 6 0 0.42 22 0 0 22 7 22 22 7 7 26.95 17.96 81.79 0 3 2 Whitelist PRAD-UK 1 0.01 0.67 0 0 0 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 36 0.03 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 12 620605 125885779 4 12 547 2 6 0 0 4 0.01 0.19 37 0 0 37 16 37 38 16 16 26.95 17.2 82.1 0 3 2 Whitelist PRAD-UK 0.12 0.41 0 0 0.16 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 20 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 13 21541530 113593175 1 11 547 0 6 1 1 3 0.01 0.13 35 0 0 35 32 35 35 32 32 26.95 12.02 87.98 0 2 3 Whitelist PRAD-UK 0.54 0.32 0 0 0.21 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 19 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 14 22609121 95699997 1 13 547 1 12 0 0 0 0 0.9 25 0 0 25 18 18 25 18 18 26.95 8.28 91.72 0 2 3 Whitelist PRAD-UK 0 1 0 0 0 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 26 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 15 41980634 78763235 1 7 547 0 6 0 0 1 0 0.04 10 0 0 10 7 10 13 10 10 26.95 4.56 95.34 0 3 2 Whitelist PRAD-UK 0.13 0.13 0 0 0.03 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 13 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 16 2084708 5283835 4 5 547 0 4 0 0 1 0.01 0 9 0 0 9 4 9 26 10 10 26.95 46.78 48.08 0 3 4 Whitelist PRAD-UK 0.45 0.01 0 0 0.16 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 9 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 17 59349204 65403564 5 5 547 0 5 0 0 0 0 0.36 1 0 0 NA NA NA 13 10 10 26.95 9.16 85.59 0 2 NA Whitelist PRAD-UK 0.1 0.61 0 0 0.07 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 18 274859 74026630 1 11 547 1 8 1 0 1 0 0.43 10 0 0 10 10 10 11 11 11 26.95 5.65 89.64 0 2 3 Whitelist PRAD-UK 0.03 0.67 0 0 0.05 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 21 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 19 19610650 53758372 2 4 547 0 4 0 0 0 0.01 0.04 9 0 0 9 7 9 16 11 13 26.95 11.26 80.96 0 2 3 Whitelist PRAD-UK 0.21 0.15 0 0 0.16 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 20 59449451 62832503 2 2 547 0 2 0 0 0 0.11 0.04 2 0 0 NA NA NA 17 5 8 26.95 31.2 62.13 0 3 5 Whitelist PRAD-UK 0.54 0.13 0 0 0.48 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 4 0 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 21 22743323 41561911 1 3 547 0 3 0 0 0 0.03 0.17 5 0 0 5 5 5 8 8 8 26.95 10.51 66.84 0 2 3 Whitelist PRAD-UK 0.41 0.39 0 0 0.33 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 22 42252977 43400537 2 2 547 0 2 0 0 0 0.11 0.23 3 0 0 NA NA NA 5 3 3 26.95 12.32 87.68 0 2 3 Whitelist PRAD-UK 0.54 0.47 0 0 0.48 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 4 0 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 PRAD-UK::A10-0015_CRUK_PC_0015 X 23125163 133708183 3 14 547 0 4 1 1 8 0.11 0.28 33 0 0 33 12 20 40 16 16 26.95 93.92 5.85 0 2 1 Whitelist PRAD-UK 1 0.54 0.53 0 0 0.48 0 No PRAD-UK A10-0015_CRUK_PC_0015 PRAD NA NA Prost-AdenoCA NA 20 0.02 NA 4 PRAD-UK DO51953 A10-0015_CRUK_PC_0015 male deceased C61 67 1392 1392 Current reformed smoker for > 15 years 20 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 45.79 False positive; manually removed PRAD-UK::A12-0020_CRUK_PC_0020 1 144857289 232968598 28 28 189 12 6 4 6 0 0.16 0 1 0 0 NA NA NA NA NA NA 24.41 0 99.68 0 2 NA Whitelist PRAD-UK 0.62 0 0 0 0.59 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 56 0.15 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 2 211637060 212318516 1 1 189 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 24.41 0.28 99.71 0 2 3 Whitelist PRAD-UK 0.62 0.03 0 NA 0.59 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 3 7099331 154439230 15 18 189 3 3 4 5 3 0.87 0.02 17 0 0 17 17 17 17 17 17 24.41 99.86 0 0 3 1 Whitelist PRAD-UK 0.93 0.08 0 0 0.9 1 High confidence PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 33 0.09 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 4 31794384 102178209 1 2 189 1 1 0 0 0 0.57 0 3 NA 0 NA NA NA NA NA NA 24.41 11.67 88.29 0 2 1 Whitelist PRAD-UK 0.68 0 NA 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 5 34900636 35209695 2 2 189 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 24.41 0 99.89 0 2 NA Whitelist PRAD-UK 0.68 0.02 0 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 6 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 7 62278398 148891232 18 47 189 4 5 5 4 29 0.97 0 1 0 0 NA NA NA NA NA NA 24.41 99.97 0 0 3 NA Whitelist PRAD-UK 0.68 0 0 0 0.98 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 65 0.17 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 8 38087686 40934742 3 15 189 0 0 1 2 12 0.3 0 3 0 0 NA NA NA 8 8 8 24.41 28.49 67.17 0 1 2 Whitelist PRAD-UK 0.93 0 0 0 0.59 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 18 0.05 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 9 79836437 81224706 1 2 189 0 0 1 1 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 24.41 0 99.97 0 2 NA Whitelist PRAD-UK 0.68 0.5 0 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 10 108518409 108958576 1 1 189 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 24.41 0.32 99.58 0 2 3 Whitelist PRAD-UK 0.62 0.02 NA NA 0.59 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 11 NA NA 0 0 189 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.3 NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 12 105575280 105809526 4 4 189 1 2 0 1 0 0.57 0.16 1 0 0 NA NA NA 5 3 3 24.41 3.01 96.94 0 2 NA Whitelist PRAD-UK 0.68 0.37 0 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 8 0.02 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 13 33259741 97816264 1 11 189 0 1 1 1 8 0.8 0.02 6 0 0 6 6 6 7 7 7 24.41 40.65 59.35 0 1 2 Whitelist PRAD-UK 0.98 0.07 0 0 0.84 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 14 0.04 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 14 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 15 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 16 63350262 77622825 5 5 189 0 1 2 2 0 0.53 1 1 0 0 NA NA NA NA NA NA 24.41 0 99.9 0 2 NA Whitelist PRAD-UK 0.68 1 0 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 10 0.03 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 17 5505003 17128184 1 2 189 0 0 1 1 0 0.57 0.18 3 0 0 NA NA NA 5 5 5 24.41 16.91 83.09 0 2 1 Whitelist PRAD-UK 0.68 0.39 0 0 0.64 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 18 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 19 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 20 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 21 39760537 42870572 1 3 189 2 0 0 0 1 0.11 0.3 3 0 0 NA NA NA NA NA NA 24.41 6.28 71.07 0 2 1 Whitelist PRAD-UK 0.62 0.55 0 0 0.48 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 5 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 22 25917971 25928729 1 1 189 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 24.41 0 100 0 2 NA Whitelist PRAD-UK 0.62 0.91 NA NA 0.59 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A12-0020_CRUK_PC_0020 X 1559779 82428576 1 31 189 4 0 0 2 25 0.06 0 3 0 0 NA NA NA NA NA NA 24.41 99.86 0.14 0 1 2 Whitelist PRAD-UK 0.9 0 0 0 0.48 1 No PRAD-UK A12-0020_CRUK_PC_0020 PRAD NA NA Prost-AdenoCA NA 37 0.1 NA 2 PRAD-UK DO51959 A12-0020_CRUK_PC_0020 male deceased C61 66 1274 1274 Current reformed smoker for > 15 years 29 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 41.91 PRAD-UK::A17-0095_CRUK_PC_0095 1 153472554 155014885 3 3 772 0 1 1 1 0 0.8 0.04 4 0 0 4 3 4 72 24 24 39.06 33.23 66.41 0 3 2 Whitelist PRAD-UK 0.87 0.15 0 0 0.84 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 6 0 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 2 29177870 206548845 5 27 772 1 0 2 2 22 0.53 0.02 56 0 0 56 16 46 69 16 16 39.06 53.35 46.49 0 3 2 Whitelist PRAD-UK 10_14_17_3_5_7 1 0.07 0 0 0.64 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 32 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 False positive; manually removed PRAD-UK::A17-0095_CRUK_PC_0095 3 18799507 143335634 9 24 772 2 2 3 2 15 0.95 0.26 30 0 0 30 21 30 38 24 24 39.06 23.8 76.08 0 2 3 Whitelist PRAD-UK 14_2_4_9 0.97 0.5 0 0 0.97 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 33 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 False positive; manually removed PRAD-UK::A17-0095_CRUK_PC_0095 4 679859 171367419 1 42 772 0 16 0 0 26 0 0.52 32 0 0 32 16 32 34 16 16 39.06 12.36 87.61 0 2 3 Whitelist PRAD-UK 11_14_2_3_7 0.01 0.76 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 58 0.04 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 5 6657316 135303281 2 12 772 1 2 1 2 6 0.88 0.03 40 0 0 40 28 30 61 33 35 39.06 20.73 78.83 0 2 3 Whitelist PRAD-UK 2 0.93 0.1 0 0 0.91 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 18 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 6 17635126 170579356 1 18 772 2 13 0 0 3 0 0.04 34 0 0 34 10 34 40 10 10 39.06 58.44 41.3 0 2 3 Whitelist PRAD-UK 9 0 0.14 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 33 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 7 740003 154793672 1 49 772 2 24 1 0 22 0 0 58 0 0 58 22 22 58 22 23 39.06 25.97 74 0 3 2 Whitelist PRAD-UK 16_17_2_4_9_X 0 0.01 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 76 0.05 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 8 123392259 129090055 2 4 772 0 4 0 0 0 0.01 0.06 8 0 0 8 3 5 44 7 13 39.06 51.48 48.38 0 2 3 Whitelist PRAD-UK 0.21 0.19 0 0 0.16 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 9 14642449 135273315 1 25 772 0 9 0 0 16 0 1 24 0 0 24 9 24 28 12 12 39.06 47.63 52.2 0 2 1 Whitelist PRAD-UK 3_4_6_7 0.41 1 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 34 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 10 1424131 123537843 1 32 772 0 18 0 0 14 0 0.55 37 0 0 37 17 37 38 18 18 39.06 50.59 49.35 0 3 2 Whitelist PRAD-UK 11_16_2_22 0 0.77 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 50 0.03 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 11 22270950 133333955 1 38 772 0 21 0 1 16 0 0 47 0 0 47 16 19 48 16 20 39.06 45.76 54.09 0 4 5 Whitelist PRAD-UK 10_12_3_4_X 0 0.01 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 60 0.04 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 12 10913800 112566167 1 34 772 1 20 0 0 13 0 0.02 42 0 0 42 10 28 45 10 10 39.06 33.81 65.63 0 3 2 Whitelist PRAD-UK 11_18_X 0 0.07 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 55 0.04 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 13 26493352 51608587 5 9 772 2 2 0 1 4 0.53 0.07 9 0 0 9 3 5 27 7 8 39.06 89.09 10.91 0 5 3 Whitelist PRAD-UK 15_9 0.97 0.22 0 0 0.64 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 14 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 14 21843858 93753839 1 23 772 0 11 1 0 11 0 0 31 0 0 31 13 18 34 16 16 39.06 3.5 96.5 0 2 3 Whitelist PRAD-UK 2_3_4 0.02 0.01 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 35 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 15 41291407 93482213 1 12 772 1 6 0 0 5 0 0.32 13 0 0 13 9 11 23 9 9 39.06 67.48 27.65 0 3 4 Whitelist PRAD-UK 4 0.54 0.57 0 0 0.09 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 19 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 16 1802279 88025686 1 19 772 0 8 1 0 10 0 0.12 24 0 0 24 9 24 26 10 10 39.06 3.65 90.95 0 2 3 Whitelist PRAD-UK 10_19_7 0.01 0.3 0 0 0.02 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 28 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 17 14089050 74031571 1 30 772 0 15 0 0 15 0 0 22 0 0 22 6 16 23 6 6 39.06 39.76 55.17 0 2 3 Whitelist PRAD-UK 2_7 0 0.02 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 45 0.03 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 18 24992540 42319497 2 2 772 0 0 1 1 0 0.57 0.18 5 0 0 5 5 5 25 11 17 39.06 63.19 36.71 0 3 4 Whitelist PRAD-UK 0.68 0.4 0 0 0.64 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 4 0 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 19 23775774 55186177 1 15 772 2 5 1 1 6 0.19 0.05 18 0 0 18 8 9 22 8 8 39.06 28.08 64.1 0 2 3 Whitelist PRAD-UK 16 0.54 0.17 0 0 0.59 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 24 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 20 802409 50822502 1 7 772 0 3 0 0 4 0.03 0.32 6 0 0 6 3 3 9 5 5 39.06 13.11 86.78 0 2 3 Whitelist PRAD-UK 0.62 0.57 0 0 0.33 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 21 10575654 45753258 1 8 772 1 7 0 0 0 0 0.74 17 0 0 17 13 17 17 13 13 39.06 8.65 59.61 0 2 3 Whitelist PRAD-UK 0.06 0.91 0 0 0.04 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 16 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 22 23478507 47041670 1 9 772 0 4 1 0 4 0.04 0.5 7 0 0 7 6 7 8 6 6 39.06 51.23 48.77 0 1 2 Whitelist PRAD-UK 10 0.62 0.75 0 0 0.36 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 14 0.01 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A17-0095_CRUK_PC_0095 X 6702691 131010344 1 16 772 0 11 0 0 5 0 0.01 22 0 0 22 13 22 24 14 14 39.06 83.25 16.75 0 2 1 Whitelist PRAD-UK 11_7 0 0.06 0 0 0 0 No PRAD-UK A17-0095_CRUK_PC_0095 PRAD NA NA Prost-AdenoCA NA 27 0.02 NA 4 PRAD-UK DO51965 A17-0095_CRUK_PC_0095 male deceased C61 58 1322 1322 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 43.49 PRAD-UK::A21-0096_CRUK_PC_0096 1 215701871 242907373 10 10 496 3 3 2 2 0 0.94 0.13 7 0 0 7 3 7 28 10 12 39.24 42.7 56.98 0 4 5 Whitelist PRAD-UK 0.96 0.33 0 0 0.96 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 20 0.02 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 2 8162087 13911525 19 22 496 6 2 6 5 3 0.52 0 1 0 0 NA NA NA 23 11 11 39.24 11.92 87.96 0 2 NA Whitelist PRAD-UK 8 0.94 0 0 0 0.64 1 Linked to high confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA With other complex events 41 0.04 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 3 113971183 160358317 4 30 496 1 1 0 2 26 0.57 0.01 1 0 0 NA NA NA 12 8 8 39.24 51.91 48.06 0 3 NA Whitelist PRAD-UK 7 0.86 0.03 0 0 0.64 1 Linked to high confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA With other complex events 34 0.03 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 4 102585699 128146094 16 28 496 5 2 5 4 12 0.68 0.01 28 0 0 28 28 28 51 51 51 39.24 9.64 90.34 0 1 2 Whitelist PRAD-UK 0.68 0.03 0 0 0.76 1 High confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 44 0.04 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 5 98099127 104173331 4 6 496 2 0 1 1 2 0.57 0.03 4 0 0 4 3 4 13 5 5 39.24 12.84 86.99 0 1 0 Whitelist PRAD-UK 0.62 0.1 0 0 0.64 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 6 110920236 118495780 13 24 496 2 1 5 5 11 0.27 0 13 0 0 13 11 13 33 19 19 39.24 60.71 39.03 0 2 1 Whitelist PRAD-UK 8 0.83 0 0 0 0.59 1 High confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 37 0.04 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 7 47819326 108795651 8 35 496 0 4 3 1 27 0.17 0 16 0 0 16 10 16 26 11 19 39.24 97.22 2.74 0 3 2 Whitelist PRAD-UK 10 0.75 0.02 0 0 0.59 1 High confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 43 0.04 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 8 38045408 103847169 27 49 496 6 3 9 9 22 0.3 0 87 0 0 87 14 19 108 14 19 39.24 72.9 23.54 0 4 1 Whitelist PRAD-UK 6 0.68 0 0 0 0.59 1 High confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA With other complex events 76 0.08 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 9 120196325 131372175 1 2 496 0 2 0 0 0 0.11 0.01 2 0 0 NA NA NA 4 3 3 39.24 51.14 48.83 0 3 4 Whitelist PRAD-UK 0.54 0.03 0 0 0.48 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 4 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 10 9280803 129008365 44 74 496 8 10 13 13 30 0.65 0 55 0 0 55 39 55 57 41 41 39.24 4.69 95.02 0 2 1 Whitelist PRAD-UK 6_7 0.7 0 0 0 0.73 1 High confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 118 0.12 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 11 100079574 105453931 5 5 496 0 1 2 2 0 0.53 0 3 0 0 NA NA NA 15 13 13 39.24 4.27 92.52 0 2 0 Whitelist PRAD-UK 0.68 0 0 0 0.64 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 12 32847418 100724265 2 7 496 1 1 3 1 1 0.57 0.52 6 0 0 6 4 6 19 9 9 39.24 58.3 41.62 0 2 4 Whitelist PRAD-UK 0.77 0.76 0 0 0.64 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 13 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 13 40656453 113562723 1 10 496 3 2 0 0 5 0.14 0.27 15 0 0 15 7 7 18 9 9 39.24 97.14 2.86 0 4 1 Whitelist PRAD-UK 6 0.62 0.51 0 0 0.59 1 Linked to high confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA With other complex events 15 0.02 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 14 83890251 85911437 3 3 496 1 0 1 1 0 0.8 0.01 5 0 0 5 5 5 7 7 7 39.24 99.79 0.21 0 3 2 Whitelist PRAD-UK 0.87 0.04 0 0 0.84 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 15 94069328 98068755 1 3 496 1 0 1 1 0 0.8 0 5 0 0 5 5 5 5 5 5 39.24 2.52 97.35 0 2 1 Whitelist PRAD-UK 0.87 0.01 0 0 0.84 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 16 85707208 87933586 1 7 496 0 1 0 0 6 0.39 0.33 1 0 0 NA NA NA NA NA NA 39.24 32.47 67.22 0 1 NA Whitelist PRAD-UK X 0.77 0.58 0 0 0.59 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 17 NA NA 0 0 496 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0 NA NA NA 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 18 NA NA 0 0 496 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 19 NA NA 0 0 496 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 20 47084010 47274682 1 1 496 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 39.24 0.3 99.6 0 2 3 Whitelist PRAD-UK 0.62 0 NA NA 0.59 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 21 NA NA 0 0 496 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 22 NA NA 0 0 496 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A21-0096_CRUK_PC_0096 X 32559602 90575521 7 16 496 2 4 1 0 9 0.17 0.3 24 0 0 24 5 7 31 9 9 39.24 96.84 0 0 1 0 Whitelist PRAD-UK 0.95 0.55 0 0 0.59 1 Low confidence PRAD-UK A21-0096_CRUK_PC_0096 PRAD NA NA Prost-AdenoCA With other complex events 23 0.02 NA 4 PRAD-UK DO51964 A21-0096_CRUK_PC_0096 male deceased C61 67 1956 1956 Current reformed smoker for > 15 years 86 yes Daily Drinker Included Prost-AdenoCA PRAD UK 1 64.34 PRAD-UK::A22-0016_CRUK_PC_0016 1 9564452 9659099 1 2 156 0 0 0 1 1 0.39 0.04 1 0 NA NA NA NA 25 6 8 63.75 56.03 43.97 0 2 NA Whitelist PRAD-UK 0.68 0.13 0 NA 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 3 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 2 210205164 210324506 1 12 156 0 1 0 1 10 0.57 0 7 0 0 7 5 7 13 5 7 63.75 0.21 99.7 0 2 1 Whitelist PRAD-UK 4_5 0.62 0.02 0 0 0.64 0 Linked to low confidence PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 14 0.04 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 3 5913292 6003447 1 1 156 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 63.75 99.97 0 0 3 5 Whitelist PRAD-UK 0.62 0.01 NA NA 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 4 25070963 26242242 6 25 156 0 1 2 3 19 0.34 0 13 0 0 13 6 13 13 6 13 63.75 13.59 86.25 0 1 2 Whitelist PRAD-UK 2_5 0.87 0 0 0 0.59 0 Low confidence PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA With other complex events 31 0.1 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 5 54361714 175053851 1 15 156 1 2 0 0 12 0.3 0.1 11 0 0 11 6 6 11 6 6 63.75 99.86 0.01 0 3 4 Whitelist PRAD-UK 2_4 0.68 0.26 0 0 0.59 0 Linked to low confidence PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA With other complex events 18 0.06 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 6 12626345 160987932 11 26 156 2 3 3 3 15 0.97 0 24 0 0 24 5 7 31 6 7 63.75 82.25 17.46 0 3 4 Whitelist PRAD-UK 12 0.54 0 0 0 0.98 0 Low confidence PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA With other complex events 37 0.12 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 7 114051807 115187853 2 2 156 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA NA NA NA 63.75 99.96 0 0 4 NA Whitelist PRAD-UK 0.68 0.36 0 0 0.64 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 8 49540195 125378425 11 11 156 2 3 5 1 0 0.36 0 1 0 0 NA NA NA 7 6 7 63.75 66.85 29.34 0 4 NA Whitelist PRAD-UK 0.62 0 0 0 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 22 0.07 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 9 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 10 34343984 38020064 1 2 156 2 0 0 0 0 0.11 0.03 6 0 0 6 4 6 18 5 5 63.75 42.5 54.18 0 3 4 Whitelist PRAD-UK 0.54 0.12 0 0 0.48 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 11 16169555 55802503 1 5 156 1 1 1 0 2 0.8 0.7 4 0 0 4 3 4 6 3 3 63.75 99.59 0.26 0 3 2 Whitelist PRAD-UK 0.68 0.9 0 0 0.84 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 8 0.03 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 12 32463480 122655730 2 9 156 0 0 1 1 7 0.57 0 12 0 0 12 5 7 18 5 12 63.75 71.74 24.46 0 3 4 Whitelist PRAD-UK 6 0.85 0.02 0 0 0.64 0 Linked to low confidence PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA With other complex events 11 0.04 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 13 74374926 74868900 1 1 156 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 63.75 100 0 0 3 NA Whitelist PRAD-UK 0.62 1 0 NA 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 14 NA NA 0 0 156 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 15 NA NA 0 0 156 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.15 0 NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 16 28595352 28630889 1 1 156 1 0 0 0 0 0.39 0.45 3 NA NA NA NA NA 6 3 4 63.75 81.14 14.34 0 5 4 Whitelist PRAD-UK 0.62 0.7 NA NA 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 17 6553211 8282226 2 3 156 1 0 0 1 1 0.57 0.01 5 0 0 5 0 4 12 5 7 63.75 93.79 6.21 0 3 1 Whitelist PRAD-UK 0.87 0.05 0 0 0.64 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 5 0.02 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 18 NA NA 0 0 156 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 19 NA NA 0 0 156 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.63 NA NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 20 NA NA 0 0 156 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA 1 NA NA NA 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 0 0 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 21 36918276 42860087 3 7 156 0 1 0 2 4 0.3 0 4 0 0 4 4 4 8 6 7 63.75 61.05 16.3 0 2 4 Whitelist PRAD-UK 0.68 0 0 0 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 10 0.03 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 22 29300762 31270556 1 1 156 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 63.75 0 100 0 2 NA Whitelist PRAD-UK 0.62 1 NA NA 0.59 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A22-0016_CRUK_PC_0016 X 66103235 66504537 1 2 156 1 1 0 0 0 0.57 0.03 1 NA 0 NA NA NA NA NA NA 63.75 0 100 0 2 NA Whitelist PRAD-UK 0.68 0.1 NA 0 0.64 0 No PRAD-UK A22-0016_CRUK_PC_0016 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 3 PRAD-UK DO51954 A22-0016_CRUK_PC_0016 male deceased C61 49 933 933 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 30.69 PRAD-UK::A24-0021_CRUK_PC_0021 1 39903182 157347897 1 14 313 0 4 1 0 9 0.04 0.03 15 0 0 15 8 11 15 8 11 36.07 66.71 30.31 0 2 1 Whitelist PRAD-UK 2 0.54 0.1 0 0 0.36 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA With other complex events 19 0.03 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 2 104733057 222529357 67 92 313 16 20 12 19 25 0.51 0 57 0 0 57 10 15 73 12 15 36.07 38.33 61.59 0 1 2 Whitelist PRAD-UK 1_16 0.93 0 0 0 0.64 1 High confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA With other complex events 159 0.25 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 3 12152327 178682467 11 31 313 1 4 3 3 20 0.63 0 26 0 0 26 7 13 29 7 8 36.07 88.94 10.92 0 3 1 Whitelist PRAD-UK 11_6 0.76 0 0 0 0.71 1 High confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA With other complex events 42 0.07 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 4 79647242 149467781 1 3 313 0 2 0 0 1 0.11 0 4 0 0 4 4 4 6 5 5 36.07 25.43 72.19 0 2 3 Whitelist PRAD-UK 0.62 0 0 0 0.48 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 5 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 5 NA NA 0 0 313 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.03 0 NA NA 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 6 78541847 151587659 15 29 313 5 6 3 1 14 0.27 0 13 0 0 13 13 13 19 19 19 36.07 25.4 74.36 0 2 1 Whitelist PRAD-UK 3 0.65 0 0 0 0.59 1 High confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 44 0.07 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 7 1384364 102071322 4 10 313 3 0 1 0 6 0.11 0.8 13 0 0 13 5 7 13 5 7 36.07 37.93 59.72 0 2 3 Whitelist PRAD-UK 9 0.68 0.95 0 0 0.48 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 14 0.02 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 8 17838913 33263156 3 3 313 1 1 1 0 0 0.8 1 3 0 0 NA NA NA 20 5 5 36.07 58.93 40.96 0 3 1 Whitelist PRAD-UK 0.87 1 0 0 0.84 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 9 10545276 140165015 1 10 313 1 3 0 0 6 0.11 0.66 8 0 0 8 5 8 9 5 5 36.07 12.77 86.88 0 2 1 Whitelist PRAD-UK 7 0.86 0.87 0 0 0.48 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 14 0.02 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 10 100650599 100815804 4 4 313 1 1 1 1 0 1 0.42 3 0 0 NA NA NA 19 6 6 36.07 4.55 95.38 0 1 0 Whitelist PRAD-UK 1 0.67 0 0 1 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 11 14837827 64851798 1 7 313 0 5 0 0 2 0 0.42 6 0 0 6 6 6 10 9 9 36.07 9.47 90.38 0 2 3 Whitelist PRAD-UK 2 0.13 0.67 0 0 0.07 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 12 0.02 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 12 94700782 133259978 1 2 313 1 1 0 0 0 0.57 0 2 0 0 NA NA NA NA NA NA 36.07 0.46 99.01 0 1 2 Whitelist PRAD-UK 0.68 0.01 0 0 0.64 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 13 50712420 94480122 1 3 313 1 1 0 0 1 0.57 0.09 2 0 0 NA NA NA NA NA NA 36.07 0.26 99.74 0 2 3 Whitelist PRAD-UK 0.62 0.24 0 0 0.64 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 5 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 14 56487995 89119833 1 4 313 0 4 0 0 0 0.01 0.14 10 0 0 10 10 10 11 11 11 36.07 1.48 98.52 0 2 3 Whitelist PRAD-UK 0.21 0.34 0 0 0.16 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 15 38098446 101693203 1 6 313 0 2 0 1 3 0.3 0.49 4 0 0 4 3 4 5 4 4 36.07 32.93 66.25 0 3 2 Whitelist PRAD-UK 3 0.68 0.73 0 0 0.59 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 9 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 16 1786815 72144386 1 12 313 2 5 0 1 4 0.07 0.22 18 0 0 18 13 14 18 13 14 36.07 66.35 29.13 0 1 2 Whitelist PRAD-UK 2 0.62 0.44 0 0 0.48 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 20 0.03 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 17 4563840 77975765 1 7 313 2 5 0 0 0 0.02 0.73 5 0 0 5 3 5 6 4 4 36.07 26.83 68.72 0 2 1 Whitelist PRAD-UK 0.41 0.9 0 0 0.33 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 14 0.02 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 18 NA NA 0 0 313 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-UK NA NA NA NA NA 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 0 0 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 19 30548624 50208711 1 4 313 1 1 0 0 2 0.57 0.54 4 0 0 4 4 4 7 5 5 36.07 24.86 74.96 0 1 2 Whitelist PRAD-UK 7 0.62 0.77 0 0 0.64 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 20 33415279 33633656 4 4 313 1 1 1 1 0 1 0.84 2 0 0 NA NA NA 5 3 3 36.07 0.75 92.58 0 2 3 Whitelist PRAD-UK 1 0.98 0 0 1 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 21 17307002 42873818 3 3 313 2 1 0 0 0 0.3 0.8 6 0 0 6 6 6 7 7 7 36.07 9.1 68.25 0 1 2 Whitelist PRAD-UK 0.62 0.95 0 0 0.59 1 No PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 22 24419325 46747607 1 4 313 1 2 0 0 1 0.3 0 6 0 0 6 5 6 10 5 5 36.07 11.48 88.52 0 2 3 Whitelist PRAD-UK 6 0.62 0.03 0 0 0.59 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 7 0.01 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A24-0021_CRUK_PC_0021 X 46719560 149633279 1 12 313 1 1 1 0 9 0.8 0.6 3 0 0 NA NA NA NA NA NA 36.07 99.44 0.56 0 1 2 Whitelist PRAD-UK 2 0.62 0.82 0 0 0.84 1 Linked to high confidence PRAD-UK A24-0021_CRUK_PC_0021 PRAD NA NA Prost-AdenoCA With other complex events 15 0.02 NA 2 PRAD-UK DO51960 A24-0021_CRUK_PC_0021 male deceased C61 55 3824 3824 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 125.79 PRAD-UK::A29-0017_CRUK_PC_0017 1 NA NA 0 0 322 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 16 5 5 0 0 0 0 0 0 Whitelist PRAD-UK NA 0 0 NA NA 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 0 0 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 2 103639433 188678383 2 8 322 0 0 2 2 4 0.26 0.04 30 0 0 30 9 22 54 9 9 90.85 99.65 0.25 0 4 3 Whitelist PRAD-UK 1 0.15 0 0 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 12 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 3 4677587 5250432 7 7 322 3 3 1 0 0 0.28 0 4 0 0 4 3 4 25 3 5 90.85 99.86 0 0 12 11 Whitelist PRAD-UK 0.62 0.01 0 0 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 14 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 4 39365659 184182914 1 10 322 1 2 0 0 7 0.3 0.06 2 0 0 NA NA NA NA NA NA 90.85 97.62 0 0 4 5 Whitelist PRAD-UK 0.68 0.18 0 0 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 13 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 5 13735145 179718726 5 44 322 1 1 2 1 39 0.9 0 30 0 0 30 5 7 32 5 7 90.85 95.07 2.27 0 4 8 Whitelist PRAD-UK 0.62 0 0 0 0.92 0 Linked to low confidence PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA With other complex events 49 0.08 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 6 38872463 53458268 3 11 322 2 3 1 0 5 0.34 0.91 8 0 0 8 3 5 13 3 5 90.85 77.96 21.8 0 4 6 Whitelist PRAD-UK 0.62 1 0 0 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 17 0.03 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 7 20348549 111432191 1 10 322 0 4 1 0 5 0.04 0.38 9 0 0 9 4 5 13 4 5 90.85 99.97 0 0 9 6 Whitelist PRAD-UK 0.62 0.63 0 0 0.36 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 15 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 8 55705727 120347671 10 33 322 1 3 3 3 23 0.75 0 17 0 0 17 4 5 44 4 4 90.85 81.54 14.54 0 17 8 Whitelist PRAD-UK 5 0.62 0 0 0 0.83 0 Low confidence PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA With other complex events 43 0.07 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 9 78306762 80267690 1 1 322 0 0 0 1 0 0.39 0.01 2 0 NA NA NA NA 4 3 4 90.85 99.83 0 0 4 6 Whitelist PRAD-UK 0.62 0.04 0 NA 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 10 82757959 90416587 12 24 322 3 2 3 4 12 0.88 0 21 0 0 21 3 5 29 3 5 90.85 95.99 3.95 0 4 1 Whitelist PRAD-UK 5 1 0 0 0 0.91 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 36 0.06 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 11 10313360 37299611 16 31 322 4 5 4 3 15 0.92 0 1 0 0 NA NA NA 6 3 3 90.85 96.01 0 0 6 NA Whitelist PRAD-UK 5 0.7 0 0 0 0.94 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 47 0.07 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 12 50887754 80071226 7 7 322 2 3 1 1 0 0.67 0.29 3 0 0 NA NA NA 17 4 5 90.85 99.95 0 0 4 5 Whitelist PRAD-UK 0.77 0.54 0 0 0.74 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 14 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 13 85992506 114932206 2 6 322 0 1 1 0 4 0.57 1 6 0 0 6 3 5 9 3 4 90.85 85.64 0 0 8 3 Whitelist PRAD-UK 5 0.68 1 0 0 0.64 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 14 37697119 37965948 1 2 322 2 0 0 0 0 0.11 0.26 1 0 0 NA NA NA NA NA NA 90.85 85 0 0 6 NA Whitelist PRAD-UK 0.54 0.5 0 0 0.48 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 15 64448234 65142518 1 1 322 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 90.85 84.59 0 0 4 NA Whitelist PRAD-UK 0.62 0.01 NA NA 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 16 20602869 75418949 1 4 322 0 1 0 1 2 0.57 0.12 3 0 0 NA NA NA NA NA NA 90.85 99.68 0 0 6 7 Whitelist PRAD-UK 5 0.68 0.31 0 0 0.64 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 17 7580636 45324930 6 14 322 0 1 2 3 8 0.34 0.04 8 0 0 8 4 5 10 6 7 90.85 87.63 12.35 0 4 6 Whitelist PRAD-UK 0.62 0.13 0 0 0.59 0 Low confidence PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA With other complex events 20 0.03 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 18 29210020 29682732 1 1 322 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 6 3 3 90.85 94.97 0 0 4 16 Whitelist PRAD-UK 0.62 0.17 NA NA 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 19 36225933 54006405 2 3 322 0 1 1 0 1 0.57 0.69 1 0 0 NA NA NA 4 3 3 90.85 92.72 0 0 6 NA Whitelist PRAD-UK 0.87 0.89 0 0 0.64 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 5 0.01 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 20 33664674 33707951 5 5 322 1 0 2 2 0 0.53 0 4 0 0 4 0 3 19 3 4 90.85 92.17 1.52 0 3 4 Whitelist PRAD-UK 0.68 0.02 0 0 0.64 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 10 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 21 39852918 42869236 1 1 322 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 5 0 3 90.85 77.35 0 0 3 9 Whitelist PRAD-UK 0.62 0.42 NA NA 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 2 0 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 22 29665477 38838163 1 2 322 0 2 0 0 0 0.11 0.6 2 NA 0 NA NA NA NA NA NA 90.85 76.22 0 0 4 5 Whitelist PRAD-UK 0.54 0.81 NA 0 0.48 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A29-0017_CRUK_PC_0017 X 63734579 64468338 4 7 322 2 0 2 0 3 0.26 0.16 1 0 0 NA NA NA 5 3 3 90.85 99.52 0 0 1 NA Whitelist PRAD-UK 0.77 0.37 0 0 0.59 0 No PRAD-UK A29-0017_CRUK_PC_0017 PRAD NA NA Prost-AdenoCA NA 11 0.02 NA 4 PRAD-UK DO51955 A29-0017_CRUK_PC_0017 male deceased C61 65 5382 5382 Current reformed smoker for > 15 years 25 yes Occassional Drinker (< once a month) Included Prost-AdenoCA PRAD UK 1 177.04 PRAD-UK::A32-0019_CRUK_PC_0019 1 28175873 31906454 4 4 192 1 1 1 1 0 1 0.04 3 0 0 NA NA NA 23 7 12 83.68 99.93 0.07 0 0 1 Whitelist PRAD-UK 1 0.15 0 0 1 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 8 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 2 171308068 191866282 6 12 192 4 0 1 1 6 0.11 0 14 0 0 14 5 7 17 5 10 83.68 98.56 1.3 0 2 4 Whitelist PRAD-UK 3 0.62 0 0 0 0.48 0 Low confidence PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA With other complex events 18 0.05 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 3 32985863 156750377 10 12 192 3 0 4 3 2 0.31 0.01 12 0 0 12 5 12 26 7 9 83.68 95.51 4.36 0 3 4 Whitelist PRAD-UK 2 0.62 0.03 0 0 0.59 0 Low confidence PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA With other complex events 22 0.06 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 4 52722884 55310950 3 4 192 0 1 1 1 1 0.8 0.08 2 0 0 NA NA NA 25 7 9 83.68 75.22 24.75 0 3 5 Whitelist PRAD-UK 1 0.23 0 0 0.84 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 7 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 5 4863735 14310563 2 4 192 0 0 1 1 2 0.57 0.55 5 0 0 5 0 3 16 5 7 83.68 70.66 29.23 0 3 5 Whitelist PRAD-UK 0.68 0.78 0 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 6 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 6 6839996 158492897 1 7 192 3 1 1 1 1 0.57 0.22 6 0 0 6 3 6 7 3 3 83.68 99.77 0 0 3 4 Whitelist PRAD-UK 0.77 0.45 0 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 13 0.03 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 7 123329712 154991044 1 2 192 1 1 0 0 0 0.57 0.04 21 0 0 21 6 6 24 6 6 83.68 99.5 0.24 0 8 4 Whitelist PRAD-UK 0.68 0.13 0 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 8 58724627 141756995 1 9 192 2 0 0 1 6 0.3 0.18 8 0 0 8 4 7 10 4 7 83.68 70.82 29.03 0 3 4 Whitelist PRAD-UK 0.97 0.4 0 0 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 12 0.03 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 9 16323508 106383321 1 7 192 4 1 0 0 2 0.04 0.06 3 0 0 NA NA NA 8 3 3 83.68 99.86 0 0 4 5 Whitelist PRAD-UK 0.62 0.18 0 0 0.36 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 12 0.03 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 10 63932597 104502403 2 6 192 2 0 0 0 4 0.11 0.16 5 0 0 5 3 5 8 4 4 83.68 86.13 13.56 0 4 2 Whitelist PRAD-UK 0.68 0.37 0 0 0.48 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 8 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 11 6457815 6743499 7 7 192 1 0 3 3 0 0.28 0.73 7 0 0 7 7 7 13 7 7 83.68 99.32 0.53 0 3 2 Whitelist PRAD-UK 0.62 0.91 0 0 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 14 0.04 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 False positive; manually removed PRAD-UK::A32-0019_CRUK_PC_0019 12 99789598 100428272 2 2 192 1 1 0 0 0 0.57 0.3 2 0 0 NA NA NA 14 4 4 83.68 86.27 13.59 0 5 6 Whitelist PRAD-UK 0.68 0.55 0 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 13 NA NA 0 0 192 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist PRAD-UK NA 0.89 NA NA NA 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 0 0 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 14 67740860 68144297 1 1 192 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 8 8 8 83.68 100 0 0 3 4 Whitelist PRAD-UK 0.62 0.97 0 NA 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 15 57055112 57258147 1 1 192 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 5 5 5 83.68 98.89 0.98 0 2 3 Whitelist PRAD-UK 0.62 0.21 NA NA 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 16 79709565 79893320 1 1 192 0 1 0 0 0 0.39 0.11 2 0 NA NA NA NA 9 3 3 83.68 58.21 41.66 0 2 3 Whitelist PRAD-UK 0.62 0.28 0 NA 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 17 15899187 79221419 1 7 192 1 0 1 2 3 0.57 0.04 12 0 0 12 5 9 15 5 9 83.68 80.07 19.56 0 3 4 Whitelist PRAD-UK 0.77 0.15 0 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 11 0.03 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 18 13225707 24889361 1 2 192 1 1 0 0 0 0.57 0.5 2 NA 0 NA NA NA 12 6 6 83.68 94.25 0 0 4 5 Whitelist PRAD-UK 0.68 0.74 NA 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 19 30813523 47655021 1 5 192 2 0 0 0 3 0.11 0.11 6 0 0 6 4 6 8 4 4 83.68 92.72 0 0 3 4 Whitelist PRAD-UK 0.62 0.28 0 0 0.48 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 7 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 20 9265162 48870738 1 5 192 1 1 0 1 2 0.8 0.61 6 0 0 6 4 6 6 4 4 83.68 99.64 0 0 4 3 Whitelist PRAD-UK 0.93 0.83 0 0 0.84 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 8 0.02 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 21 39853789 42861872 1 2 192 1 0 0 0 1 0.39 0.09 2 0 NA NA NA NA 8 3 3 83.68 74.59 2.76 0 3 4 Whitelist PRAD-UK 0.54 0.25 0 NA 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 3 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 22 45468275 47562126 2 2 192 0 0 1 1 0 0.57 1 3 NA 0 NA NA NA 6 3 5 83.68 99.87 0.13 0 3 1 Whitelist PRAD-UK 0.68 1 NA 0 0.64 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 4 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A32-0019_CRUK_PC_0019 X 99226526 99262296 1 1 192 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 83.68 44.13 55.87 0 2 NA Whitelist PRAD-UK 0.62 0.01 NA NA 0.59 0 No PRAD-UK A32-0019_CRUK_PC_0019 PRAD NA NA Prost-AdenoCA NA 2 0.01 NA 5 PRAD-UK DO51958 A32-0019_CRUK_PC_0019 male deceased C61 66 3112 3112 Lifelong non-smoker (<100 cigarettes smoked in lifetime) 0 yes Weekly Drinker (>=1x a week) Included Prost-AdenoCA PRAD UK 1 102.37 PRAD-UK::A34-0022_CRUK_PC_0022 1 57939877 197770719 1 12 461 3 0 2 1 6 0.34 0.66 15 0 0 15 4 15 22 4 6 36.58 68.88 31.12 0 3 2 Whitelist PRAD-UK 0.68 0.87 0 0 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 18 0.02 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 2 31507439 200933013 13 47 461 3 2 4 4 34 0.84 0 30 0 0 30 11 14 31 11 11 36.58 6.85 93.06 0 2 1 Whitelist PRAD-UK 8 0.92 0 0 0 0.88 0 Linked to high confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA With other complex events 60 0.07 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 False positive; manually removed PRAD-UK::A34-0022_CRUK_PC_0022 3 59052336 114484374 1 12 461 1 1 0 0 10 0.57 0.41 4 0 0 4 3 4 5 3 3 36.58 0.44 99.22 0 2 1 Whitelist PRAD-UK 16_2_8 0.62 0.66 0 0 0.64 0 Linked to high confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 14 0.02 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 4 22137845 23065538 5 5 461 1 3 1 0 0 0.28 0.08 1 0 0 NA NA NA 6 3 3 36.58 66.12 33.59 0 2 NA Whitelist PRAD-UK 0.62 0.22 0 0 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 10 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 5 150213967 151472328 3 3 461 1 0 1 1 0 0.8 0.92 3 0 0 NA NA NA 20 5 8 36.58 63.3 36.56 0 3 2 Whitelist PRAD-UK 0.87 1 0 0 0.84 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 6 84353849 118032396 2 4 461 1 1 1 1 0 1 0.33 3 0 0 NA NA NA 16 7 7 36.58 58.88 40.87 0 1 2 Whitelist PRAD-UK 1 0.58 0 0 1 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 7 65221736 117332894 1 2 461 2 0 0 0 0 0.11 0.41 2 0 0 NA NA NA 8 4 5 36.58 50.07 47.58 0 1 2 Whitelist PRAD-UK 0.54 0.65 0 0 0.48 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 4 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 8 18259748 136762151 51 93 461 13 12 13 13 42 1 0 67 0 0 67 11 16 71 11 16 36.58 76.38 23.5 0 2 3 Whitelist PRAD-UK 13_2 0.97 0 0 0 1 0 High confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA With other complex events 144 0.16 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 9 20688187 112491754 1 8 461 2 1 0 0 5 0.3 0.72 1 0 0 NA NA NA NA NA NA 36.58 0 99.84 0 2 NA Whitelist PRAD-UK 0.62 0.9 0 0 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 11 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 10 82501407 92221074 19 19 461 4 5 5 5 0 0.98 0 23 0 0 23 23 23 29 26 26 36.58 48.21 51.73 0 2 1 Whitelist PRAD-UK 1 0.01 0 0 0.99 0 High confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 38 0.04 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 11 560755 90858378 1 10 461 4 1 1 0 4 0.11 0.74 13 0 0 13 3 13 13 3 3 36.58 50.28 49.36 0 2 1 Whitelist PRAD-UK 0.86 0.91 0 0 0.48 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 16 0.02 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 12 113640305 126355202 2 6 461 1 1 0 0 4 0.57 0.32 1 0 0 NA NA NA 7 5 5 36.58 23.76 76.15 0 4 NA Whitelist PRAD-UK 0.93 0.57 0 0 0.64 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 8 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 13 75922651 79259286 6 6 461 2 2 1 1 0 0.88 0.05 6 0 0 6 6 6 13 8 8 36.58 41.21 58.79 0 1 2 Whitelist PRAD-UK 0.93 0.17 0 0 0.91 0 Low confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA Canonical without polyploidization 12 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 14 42240179 72882920 2 4 461 0 0 1 1 2 0.57 0.79 2 0 0 NA NA NA 5 5 5 36.58 4.05 95.95 0 1 2 Whitelist PRAD-UK 0.62 0.94 0 0 0.64 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 6 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 15 44471010 44504067 1 1 461 1 0 0 0 0 0.39 0.39 1 0 NA NA NA NA NA NA NA 36.58 0 99.9 0 2 NA Whitelist PRAD-UK 0.62 0.64 0 NA 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 2 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 16 20629881 80630419 1 15 461 1 2 0 1 11 0.57 0.06 8 0 0 8 7 8 9 7 7 36.58 1.04 98.86 0 2 1 Whitelist PRAD-UK 0.73 0.19 0 0 0.64 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 19 0.02 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 17 63355857 63386633 1 2 461 1 0 0 0 1 0.39 0.66 3 0 NA NA NA NA 8 6 6 36.58 59.74 40.26 0 3 2 Whitelist PRAD-UK 0.68 0.87 0 NA 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 3 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 18 31302450 40220631 2 7 461 0 1 1 0 5 0.57 0.19 3 0 0 NA NA NA 4 4 4 36.58 51.78 48.12 0 1 2 Whitelist PRAD-UK 13_8 0.96 0.41 0 0 0.64 0 Linked to high confidence PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA With other complex events 9 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 19 14277499 54413171 1 4 461 3 0 0 0 1 0.03 0.61 6 0 0 6 6 6 7 7 7 36.58 6.09 93.53 0 1 2 Whitelist PRAD-UK 0.54 0.83 0 0 0.33 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 7 0.01 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 20 21894191 34889857 1 2 461 0 1 0 1 0 0.57 0.11 3 0 0 NA NA NA 6 6 6 36.58 17.98 81.92 0 2 3 Whitelist PRAD-UK 0.68 0.28 0 0 0.64 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 4 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 21 40909343 42892417 1 2 461 2 0 0 0 0 0.11 0.67 2 0 0 NA NA NA 5 5 5 36.58 0.93 76.27 0 1 2 Whitelist PRAD-UK 0.54 0.87 0 0 0.48 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 4 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 22 21352385 21369254 1 1 461 1 0 0 0 0 0.39 0.67 1 0 NA NA NA NA NA NA NA 36.58 0 100 0 2 NA Whitelist PRAD-UK 0.62 0.87 0 NA 0.59 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 2 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-UK::A34-0022_CRUK_PC_0022 X 2954698 3845500 2 2 461 0 1 0 1 0 0.57 0.75 2 0 0 NA NA NA 11 11 11 36.58 66.39 33.61 0 1 2 Whitelist PRAD-UK 0.68 0.92 0 0 0.64 0 No PRAD-UK A34-0022_CRUK_PC_0022 PRAD NA NA Prost-AdenoCA NA 4 0 NA 2 PRAD-UK DO51962 A34-0022_CRUK_PC_0022 male deceased C61 56 4262 4262 Current reformed smoker for > 15 years 60 yes Social Drinker (> once a month, < once a week) Included Prost-AdenoCA PRAD UK 1 140.2 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 1 NA NA 0 0 21 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.88 NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 2 174262802 174969596 1 1 21 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.03 0.29 99.6 0 1 2 Whitelist PRAD-US 0.62 1 NA NA 0.59 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 2 0.05 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 3 63994552 69096592 1 2 21 0 0 1 0 1 0.39 0.18 1 NA NA NA NA NA NA NA NA 5.03 0 99.95 0 2 NA Whitelist PRAD-US 0.68 0.4 NA NA 0.59 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 3 0.07 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 4 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 5 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 6 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 7 NA NA 0 0 21 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.56 NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 8 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 9 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 10 21862324 38385837 3 3 21 0 1 1 1 0 0.8 0.07 1 0 0 NA NA NA NA NA NA 5.03 0 99.82 0 2 NA Whitelist PRAD-US 0.87 0.21 0 0 0.84 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 6 0.14 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 11 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 12 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 13 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 14 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 15 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 16 21994968 55398093 8 8 21 2 1 3 2 0 0.8 0 1 0 0 NA NA NA NA NA NA 5.03 0 99.99 0 2 NA Whitelist PRAD-US 0.87 0 0 0 0.84 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 16 0.38 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 17 56645217 57191271 1 1 21 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 5.03 0 100 0 2 NA Whitelist PRAD-US 0.62 0.69 NA NA 0.59 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 2 0.05 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 18 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 19 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 20 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 21 39909557 42870270 1 2 21 1 0 0 0 1 0.39 0 2 NA NA NA NA NA NA NA NA 5.03 1.49 75.86 0 1 2 Whitelist PRAD-US 0.68 0.01 NA NA 0.59 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 3 0.07 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 22 NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 X NA NA 0 0 21 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 PRAD 0.66 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36356 TCGA-HI-7169 11fb5853-8eeb-4ad8-825d-3eaaf3fa08d6 male alive C61 55 NA 1949 NA Included Prost-AdenoCA PRAD US 0 64.11 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 3 166956604 190014420 2 2 6 0 0 1 1 0 0.57 0.06 1 NA 0 NA NA NA NA NA NA 4.95 0 99.95 0 2 NA Whitelist PRAD-US 0.68 0.19 NA 0 0.64 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.33 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 5 162056794 167947090 1 1 6 0 1 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 4.95 0 99.86 0 2 NA Whitelist PRAD-US 0.62 0.57 NA NA 0.59 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.17 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 6 17025802 85688974 1 2 6 0 0 2 0 0 0.11 0.05 1 NA 0 NA NA NA NA NA NA 4.95 0 99.85 0 2 NA Whitelist PRAD-US 0.54 0.15 NA 0 0.48 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 4 0.33 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 10 127464292 128614739 1 1 6 1 0 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 4.95 0 99.82 0 2 NA Whitelist PRAD-US 0.62 0.49 NA NA 0.59 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 2 0.17 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 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NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::18e79a01-07a2-4cd5-b700-71d41724e041 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 18e79a01-07a2-4cd5-b700-71d41724e041 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36239 TCGA-CH-5763 18e79a01-07a2-4cd5-b700-71d41724e041 male alive C61 66 NA 365 NA Included Prost-AdenoCA PRAD US 0 12.01 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 1 21235981 246814200 9 14 88 2 3 3 1 5 0.75 0 16 0 0 16 11 11 17 11 11 15.17 4.65 95.34 1 2 1 Whitelist PRAD-US 5 0.98 0 0 0 0.83 1 High confidence PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA Canonical without polyploidization 23 0.13 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 2 3647958 18483253 1 2 88 2 0 0 0 0 0.11 0.03 4 NA 0 4 4 4 5 5 5 15.17 5.34 94.54 0 1 2 Whitelist PRAD-US 0.54 0.12 NA 0 0.48 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 3 96355052 96464688 1 1 88 1 0 0 0 0 0.39 0.53 1 0.01 NA NA NA NA 4 4 4 15.17 5.38 94.57 0 2 NA Whitelist PRAD-US 0.62 0.76 0.01 NA 0.59 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 4 13952853 72206902 1 3 88 3 0 0 0 0 0.03 0.53 2 0 0 NA NA NA NA NA NA 15.17 0.62 99.37 0 1 2 Whitelist PRAD-US 0.41 0.76 0 0 0.33 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 5 54730905 58095209 1 5 88 2 1 0 0 2 0.3 0.12 7 0 0 7 7 7 11 7 7 15.17 15.13 82.18 0 1 0 Whitelist PRAD-US 0.93 0.31 0 0 0.59 1 Linked to high confidence PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA Canonical without polyploidization 8 0.05 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 6 15679261 96991141 1 4 88 2 0 0 0 2 0.11 0.82 4 0.01 0 4 4 4 5 5 5 15.17 15 84.75 0 1 2 Whitelist PRAD-US 0.54 0.96 0.01 0 0.48 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 6 0.03 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 7 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 8 9194649 67046989 7 20 88 2 3 1 1 13 0.67 0 9 0 0 9 9 9 10 10 10 15.17 41.64 58.35 0 1 2 Whitelist PRAD-US 17 0.91 0 0 0 0.74 1 High confidence PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA Canonical without polyploidization 27 0.15 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 9 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 10 NA NA 0 0 88 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.41 NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 11 25754426 27733479 1 1 88 0 1 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 15.17 1.47 98.1 0 2 3 Whitelist PRAD-US 0.62 0.42 NA NA 0.59 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 12 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 13 25071631 25098465 1 1 88 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 7 7 7 15.17 34.51 51.34 0 2 NA Whitelist PRAD-US 0.62 0.02 0 NA 0.59 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 14 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 15 40311151 40504390 1 1 88 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 15.17 0.19 84.29 0 1 2 Whitelist PRAD-US 0.62 0.76 NA NA 0.59 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 16 NA NA 0 0 88 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.91 NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 17 10827228 11022986 16 29 88 5 5 3 3 13 0.8 0 12 0 0 12 12 12 15 15 15 15.17 6.41 93.58 0 1 2 Whitelist PRAD-US 8 0.88 0 0 0 0.84 1 High confidence PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA Canonical without polyploidization 45 0.26 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 18 12321773 12382001 1 2 88 0 0 0 1 1 0.39 1 1 NA NA NA NA NA NA NA NA 15.17 15.75 84.22 0 2 NA Whitelist PRAD-US 0.68 1 NA NA 0.59 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 3 0.02 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 19 NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 20 7178989 7200694 1 2 88 0 0 1 1 0 0.57 0.71 1 NA 0 NA NA NA NA NA NA 15.17 0 99.01 0 2 NA Whitelist PRAD-US 0.68 0.9 NA 0 0.64 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 21 NA NA 0 0 88 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist PRAD-US NA 0.26 NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d 22 NA NA 0 0 88 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.52 NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::3acd8328-76f7-4f43-9660-394b95748c3d X NA NA 0 0 88 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 3acd8328-76f7-4f43-9660-394b95748c3d PRAD 0.29 1.87 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36254 TCGA-CH-5771 3acd8328-76f7-4f43-9660-394b95748c3d male alive C61 63 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 1 100529010 105521398 2 3 126 0 1 1 0 1 0.57 0.05 1 0 0 NA NA NA NA NA NA 8.94 0.32 99.67 0 2 NA Whitelist PRAD-US 0.62 0.16 0 0 0.64 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 5 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 2 131735197 162910112 3 3 126 0 0 1 2 0 0.3 0.26 4 0 0 4 4 4 9 9 9 8.94 10.29 89.61 0 1 2 Whitelist PRAD-US 0.62 0.5 0 0 0.59 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 3 2973633 169320706 1 10 126 2 1 0 1 6 0.57 0.6 2 0 0 NA NA NA NA NA NA 8.94 0.29 99.66 0 2 3 Whitelist PRAD-US 18 0.96 0.82 0 0 0.64 1 Linked to high confidence PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA With other complex events 14 0.06 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 4 129883898 133600267 3 4 126 0 0 2 1 1 0.3 0.01 3 0 0 NA NA NA 15 7 7 8.94 3.24 96.74 0 2 1 Whitelist PRAD-US 0.62 0.05 0 0 0.59 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 7 0.03 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 5 99742945 161196865 2 4 126 0 1 1 2 0 0.57 0.86 3 0 0 NA NA NA NA NA NA 8.94 0.73 99.14 0 2 1 Whitelist PRAD-US 0.68 0.99 0 0 0.64 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 6 67029475 160182060 1 10 126 6 0 0 1 3 0 0.19 8 0 0 8 5 8 9 6 6 8.94 21.07 78.7 0 1 2 Whitelist PRAD-US 0.54 0.41 0 0 0.09 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 17 0.07 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 7 119418950 119440029 1 1 126 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 8.94 0 99.77 0 2 NA Whitelist PRAD-US 0.62 1 0 NA 0.59 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 8 64418681 134574191 18 18 126 2 3 6 7 0 0.29 0 16 0 0 16 11 16 17 11 11 8.94 0.95 99.04 0 2 1 Whitelist PRAD-US 0.62 0 0 0 0.59 1 High confidence PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA Canonical without polyploidization 36 0.14 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 9 7167404 7576843 2 2 126 1 0 0 1 0 0.57 0.49 1 0 0 NA NA NA NA NA NA 8.94 0 99.32 0 2 NA Whitelist PRAD-US 0.68 0.74 0 0 0.64 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 10 53115342 111775124 1 4 126 4 0 0 0 0 0.01 0.67 6 0 0 6 6 6 7 7 7 8.94 22.27 77.56 0 1 2 Whitelist PRAD-US 0.21 0.87 0 0 0.16 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 11 86168226 98756069 3 3 126 0 0 1 2 0 0.3 0.67 7 0 0 7 7 7 7 7 7 8.94 7.8 91.77 0 2 1 Whitelist PRAD-US 0.62 0.87 0 0 0.59 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 12 24952262 87448005 2 2 126 0 0 1 1 0 0.57 0.13 2 NA 0 NA NA NA NA NA NA 8.94 0.02 99.96 0 1 2 Whitelist PRAD-US 0.68 0.33 NA 0 0.64 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 13 NA NA 0 0 126 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.58 NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 14 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 15 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 16 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 17 9272138 9321092 1 1 126 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 8.94 0.06 99.91 0 1 2 Whitelist PRAD-US 0.62 0.51 NA NA 0.59 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 18 4417928 70232682 17 24 126 3 4 5 5 7 0.89 0 14 0 0 14 8 14 15 8 8 8.94 16.56 83.41 0 2 1 Whitelist PRAD-US 0.97 0 0 0 0.92 1 High confidence PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA With other complex events 41 0.16 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 19 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 20 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 21 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 22 NA NA 0 0 126 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::4fe004e5-49f9-4336-a690-6ebad512c813 X 87987478 147154931 1 2 126 1 0 1 0 0 0.57 0.54 1 0 0 NA NA NA NA NA NA 8.94 100 0 0 1 NA Whitelist PRAD-US 0.68 0.77 0 0 0.64 1 No PRAD-US 4fe004e5-49f9-4336-a690-6ebad512c813 PRAD 0.21 1.89 Prost-AdenoCA NA 4 0.02 NA 2 PRAD-US DO36360 TCGA-EJ-7791 4fe004e5-49f9-4336-a690-6ebad512c813 male alive C61 67 NA 217 NA Included Prost-AdenoCA PRAD US 0 7.14 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 1 241679959 241817478 1 1 10 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 5.24 0 100 0 2 NA Whitelist PRAD-US 0.62 0.78 NA NA 0.59 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 2 0.1 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 3 69939747 72886117 1 1 10 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 5.24 1.49 98.34 0 1 2 Whitelist PRAD-US 0.62 0.76 NA NA 0.59 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 2 0.1 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 5 3777370 3788122 1 1 10 1 0 0 0 0 0.39 0.48 1 NA NA NA NA NA NA NA NA 5.24 0 99.86 0 2 NA Whitelist PRAD-US 0.62 0.72 NA NA 0.59 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 2 0.1 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 8 136187008 136442464 1 1 10 1 0 0 0 0 0.39 0.41 1 NA NA NA NA NA NA NA NA 5.24 0 99.99 0 2 NA Whitelist PRAD-US 0.62 0.65 NA NA 0.59 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 2 0.1 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 10 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.63 NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 16 58593786 82281594 1 2 10 2 0 0 0 0 0.11 0.03 4 NA 0 4 4 4 5 5 5 5.24 0.4 99.49 0 1 2 Whitelist PRAD-US 0.54 0.1 NA 0 0.48 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 4 0.2 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 17 41887723 44107090 1 2 10 1 1 0 0 0 0.57 0.03 3 NA 0 NA NA NA 5 5 5 5.24 3.53 96.47 0 1 2 Whitelist PRAD-US 0.68 0.11 NA 0 0.64 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 4 0.2 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 21 39909709 42871464 1 1 10 1 0 0 0 0 0.39 0.12 2 NA NA NA NA NA NA NA NA 5.24 6.15 71.2 0 1 2 Whitelist PRAD-US 0.62 0.3 NA NA 0.59 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 2 0.1 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::59207bcd-f127-481f-b576-8716da7d7d97 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 59207bcd-f127-481f-b576-8716da7d7d97 PRAD 0.25 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36372 TCGA-G9-6336 59207bcd-f127-481f-b576-8716da7d7d97 male alive C61 57 NA 1669 NA Included Prost-AdenoCA PRAD US 0 54.9 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 1 50713589 191622424 19 19 39 4 2 9 4 0 0.13 0 15 0 0 15 15 15 17 17 17 5.47 2.16 97.84 0 1 2 Whitelist PRAD-US 0.62 0 0 0 0.56 1 High confidence PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA Canonical without polyploidization 38 0.49 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 2 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 3 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 4 112164830 113429653 2 2 39 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 5.47 0 99.99 0 2 NA Whitelist PRAD-US 0.68 1 NA 0 0.64 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 5 10684545 12676854 1 1 39 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 5.47 0 99.84 0 2 NA Whitelist PRAD-US 0.62 0.76 NA NA 0.59 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 6 62617511 70840186 10 10 39 3 4 1 2 0 0.57 0 9 0 0 9 9 9 9 9 9 5.47 0.11 99.75 0 2 1 Whitelist PRAD-US 0.68 0 0 0 0.64 1 High confidence PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA Canonical without polyploidization 20 0.26 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 7 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 8 4399294 15536701 2 2 39 0 0 1 1 0 0.57 0.45 4 0.15 0 4 4 4 7 7 7 5.47 6.86 93.13 0 1 2 Whitelist PRAD-US 0.68 0.69 0.15 0 0.64 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 4 0.05 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 9 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 10 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 11 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 12 NA NA 0 0 39 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 1 NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 13 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 14 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 15 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 16 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 17 41809009 42464494 1 1 39 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 5.47 0.81 99.19 0 1 2 Whitelist PRAD-US 0.62 1 NA NA 0.59 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 18 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 19 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 20 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 21 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba 22 NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::5dd69c3e-9a3d-450c-9f10-10b4d6daeeba X NA NA 0 0 39 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba PRAD 0.79 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36226 TCGA-HC-7075 5dd69c3e-9a3d-450c-9f10-10b4d6daeeba male alive C61 63 NA 63 NA Included Prost-AdenoCA PRAD US 0 2.07 PRAD-US::6845076e-e940-4437-8618-81db4a447544 1 NA NA 0 0 15 0 0 0 0 0 NA 0.33 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.58 NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 3 70989306 71032971 1 1 15 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.27 0 99.86 0 2 NA Whitelist PRAD-US 0.62 1 NA NA 0.59 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 5 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 6 25649007 30123403 1 1 15 1 0 0 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 6.27 0 99.85 0 2 NA Whitelist PRAD-US 0.62 0.18 NA NA 0.59 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 7 NA NA 0 0 15 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.41 NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 9 123397906 135914836 1 3 15 1 0 0 0 2 0.39 0.02 1 NA 0 NA NA NA NA NA NA 6.27 0.13 99.19 0 2 NA Whitelist PRAD-US 0.87 0.08 NA 0 0.59 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 4 0.13 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 11 67845895 68382536 1 1 15 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 6.27 0.4 99.17 0 1 2 Whitelist PRAD-US 0.62 0.11 NA NA 0.59 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 12 NA NA 0 0 15 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.36 NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 13 NA NA 0 0 15 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.25 NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 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0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 21 39864277 42869602 1 1 15 1 0 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 6.27 6.24 71.11 0 1 2 Whitelist PRAD-US 0.62 0.38 NA NA 0.59 0 No PRAD-US 6845076e-e940-4437-8618-81db4a447544 PRAD 0.53 1.94 Prost-AdenoCA NA 2 0.07 NA 2 PRAD-US DO36345 TCGA-G9-6365 6845076e-e940-4437-8618-81db4a447544 male alive C61 71 NA 804 NA Included Prost-AdenoCA PRAD US 0 26.45 PRAD-US::6845076e-e940-4437-8618-81db4a447544 22 38172591 42886015 1 2 15 0 0 1 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 6.27 0 100 0 2 NA Whitelist PRAD-US 0.68 0 NA NA 0.59 0 No PRAD-US 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PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 2 82362285 156575950 8 8 144 3 1 2 2 0 0.8 0.55 10 0 0 10 10 10 11 11 11 13.46 1.21 98.7 0 1 2 Whitelist PRAD-US 0.87 0.77 0 0 0.84 0 High confidence PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA Canonical without polyploidization 16 0.06 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 3 20035036 181045916 5 8 144 1 0 2 2 3 0.53 0.51 9 0 0 9 9 9 9 9 9 13.46 5.03 94.92 0 2 1 Whitelist PRAD-US 1 0.87 0.75 0 0 0.64 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 13 0.05 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 False positive; manually removed PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 4 63524920 177623975 2 10 144 1 0 2 3 4 0.34 0 8 0 0 8 8 8 11 11 11 13.46 0.16 99.83 0 1 2 Whitelist PRAD-US 0.68 0.01 0 0 0.59 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 16 0.06 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 5 121533482 170643022 7 9 144 3 2 1 1 2 0.67 0.02 9 0 0 9 9 9 13 13 13 13.46 26.22 73.64 0 2 1 Whitelist PRAD-US 0.62 0.09 0 0 0.74 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 16 0.06 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 False positive; manually removed PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 6 99651102 114270414 5 5 144 3 0 1 1 0 0.28 0.01 5 0 0 5 3 5 9 5 5 13.46 13.25 86.55 0 2 1 Whitelist PRAD-US 0.62 0.04 0 0 0.59 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 10 0.03 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 7 8238638 153576066 25 25 144 11 6 5 3 0 0.14 0 35 0 0 35 14 14 35 14 14 13.46 6.81 92.96 0 2 1 Whitelist PRAD-US 0.62 0 0 0 0.58 0 High confidence PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA With other complex events 50 0.17 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 8 94681426 113669451 1 4 144 1 0 1 0 2 0.57 0.26 1 0 0 NA NA NA NA NA NA 13.46 0 99.98 0 2 NA Whitelist PRAD-US 0.68 0.5 0 0 0.64 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 9 32040479 32066187 1 1 144 1 0 0 0 0 0.39 0.05 1 NA NA NA NA NA NA NA NA 13.46 0 99.3 0 2 NA Whitelist PRAD-US 0.62 0.16 NA NA 0.59 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 10 9443050 11422607 1 2 144 2 0 0 0 0 0.11 0.07 3 NA 0 NA NA NA 5 5 5 13.46 50.08 46.31 0 2 1 Whitelist PRAD-US 0.54 0.21 NA 0 0.48 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 11 29023920 29824013 2 2 144 0 0 1 1 0 0.57 0.55 1 0 0 NA NA NA 5 5 5 13.46 9.8 86.27 0 2 NA Whitelist PRAD-US 0.68 0.78 0 0 0.64 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 12 74932833 82996881 3 3 144 2 0 1 0 0 0.3 0.69 6 0 0 6 6 6 7 7 7 13.46 0.73 99.19 0 1 2 Whitelist PRAD-US 0.62 0.89 0 0 0.59 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 13 29851384 59131782 3 3 144 1 0 1 1 0 0.8 0.64 4 0 0 4 4 4 7 7 7 13.46 39.7 60.3 0 1 2 Whitelist PRAD-US 0.87 0.85 0 0 0.84 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 14 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 15 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 16 NA NA 0 0 144 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.53 0 NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 17 NA NA 0 0 144 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.41 NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 18 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 19 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 20 40532515 40549918 1 1 144 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 13.46 0 98.99 0 2 NA Whitelist PRAD-US 0.62 0.63 NA NA 0.59 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 2 0.01 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 21 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 22 NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::73f875cb-bcfc-43ba-ab97-4e94caf836d4 X NA NA 0 0 144 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 73f875cb-bcfc-43ba-ab97-4e94caf836d4 PRAD 0.29 1.84 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36285 TCGA-HC-7737 73f875cb-bcfc-43ba-ab97-4e94caf836d4 male alive C61 55 NA 64 NA Included Prost-AdenoCA PRAD US 0 2.11 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 1 NA NA 0 0 12 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.48 NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 3 70766023 71641400 1 1 12 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 5.43 0.44 99.43 0 1 2 Whitelist PRAD-US 0.62 0.8 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 4 164412976 164490674 1 1 12 1 0 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 5.43 0.04 99.94 0 1 2 Whitelist PRAD-US 0.62 0.79 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 6 4555209 4643434 1 1 12 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 5.43 0.05 99.8 0 1 2 Whitelist PRAD-US 0.62 0.76 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 10 88980112 90313518 1 2 12 1 0 0 0 1 0.39 0.02 3 NA NA NA NA NA 5 3 3 5.43 3.87 95.97 0 1 0 Whitelist PRAD-US 0.54 0.07 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 3 0.12 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 11 68232852 68863909 1 1 12 0 0 0 1 0 0.39 0 3 0 0 NA NA NA 5 5 5 5.43 5.25 94.2 0 2 1 Whitelist PRAD-US 0.62 0.01 0 0 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male 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87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 15 41476011 41713244 1 1 12 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 5.43 0.23 99.77 0 1 2 Whitelist PRAD-US 0.62 0.53 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 16 19401023 20404276 1 1 12 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 5.43 1.11 98.78 0 1 2 Whitelist PRAD-US 0.62 0.52 NA NA 0.59 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 2 0.08 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 21 NA NA 0 0 12 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.04 NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::87959988-bb25-47ee-afc1-9af92592bbe7 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 87959988-bb25-47ee-afc1-9af92592bbe7 PRAD 0.33 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36273 TCGA-G9-7522 87959988-bb25-47ee-afc1-9af92592bbe7 male alive C61 49 NA 452 NA Included Prost-AdenoCA PRAD US 0 14.87 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 1 NA NA 0 0 18 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 9 5 5 0 0 0 0 0 0 Whitelist PRAD-US NA 0.05 NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 2 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 1 NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 3 53382104 178030133 2 5 18 0 1 0 1 3 0.57 0 4 0 0 4 3 4 7 3 5 11.19 0.56 99.31 0 2 1 Whitelist PRAD-US 0.62 0 0 0 0.64 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 7 0.19 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 4 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 8 6278089 29894838 1 1 18 1 0 0 0 0 0.39 0.23 4 NA NA 4 4 4 6 5 5 11.19 19.4 80.6 0 1 2 Whitelist PRAD-US 0.62 0.47 NA NA 0.59 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 2 0.06 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 14 NA NA 0 0 18 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.69 NA NA NA 0 No PRAD-US 91e249a6-b0b0-487e-9fad-0e9f5798dcae PRAD 0.81 1.98 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36262 TCGA-HC-7740 91e249a6-b0b0-487e-9fad-0e9f5798dcae male alive C61 59 NA 53 NA Included Prost-AdenoCA PRAD US 0 1.74 PRAD-US::91e249a6-b0b0-487e-9fad-0e9f5798dcae 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 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TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 15 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.17 NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 21 39862739 42862701 1 1 2 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 4.96 0 77.35 0 2 NA Whitelist PRAD-US 0.62 0.09 NA NA 0.59 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 2 0.5 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::be5411dc-3caa-4b25-9b94-ce463e8e52b4 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US be5411dc-3caa-4b25-9b94-ce463e8e52b4 PRAD 0.98 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36265 TCGA-CH-5789 be5411dc-3caa-4b25-9b94-ce463e8e52b4 male alive C61 61 NA 304 NA Included Prost-AdenoCA PRAD US 0 10 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 1 44799381 166413427 1 6 222 4 1 0 0 1 0.04 0.02 7 0 0 7 7 7 9 9 9 28.5 1.23 98.77 0 2 1 Whitelist PRAD-US 0.54 0.07 0 0 0.36 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 11 0.02 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 2 50901965 229972547 24 24 222 6 3 7 8 0 0.51 0 36 0 0 36 15 36 37 16 16 28.5 11.51 88.38 0 2 1 Whitelist PRAD-US 0.68 0 0 0 0.64 0 High confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA With other complex events 48 0.11 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 3 84662162 86457639 2 2 222 0 0 1 1 0 0.57 0.01 3 0 0 NA NA NA 8 5 5 28.5 54.56 41.93 4 2 1 Whitelist PRAD-US 0.68 0.04 0 0 0.64 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 4 130270320 162657668 5 10 222 3 2 3 2 0 0.94 0.28 13 0 0 13 13 13 13 13 13 28.5 0.17 99.73 0 2 1 Whitelist PRAD-US 0.96 0.52 0 0 0.96 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 20 0.05 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 False positive; manually removed PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 5 30074933 152675583 23 25 222 7 3 7 6 2 0.6 0 32 0 0 32 21 32 33 22 22 28.5 8.05 91.82 39 1 2 Whitelist PRAD-US 0.87 0 0 0 0.67 0 High confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA Canonical without polyploidization 48 0.11 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 6 57910476 98537020 10 10 222 1 1 3 5 0 0.22 0.78 9 0 0 9 5 9 13 6 6 28.5 30.52 66.25 0 1 2 Whitelist PRAD-US 0.62 0.93 0 0 0.59 0 Low confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA With other complex events 20 0.05 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 7 84753907 128099139 10 14 222 0 2 4 4 4 0.22 0 21 0 0 21 7 10 24 7 10 28.5 73.96 23.34 0 2 3 Whitelist PRAD-US 11 0.81 0 0 0 0.59 0 High confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA With other complex events 24 0.05 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 8 49431428 59807696 17 17 222 5 4 4 4 0 0.98 0 19 0 0 19 19 19 27 21 21 28.5 33 63.48 1 2 1 Whitelist PRAD-US 0.99 0 0 0 0.99 0 High confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA Canonical without polyploidization 34 0.08 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 9 NA NA 0 0 222 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.02 NA NA NA 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 10 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 11 29320290 106781287 7 7 222 1 1 2 3 0 0.67 0 20 0 0 20 6 9 30 10 15 28.5 62.67 33.73 1 1 3 Whitelist PRAD-US 0.77 0 0 0 0.74 0 Low confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA With other complex events 14 0.03 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 12 16014655 16946829 1 1 222 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 28.5 0.7 99.22 0 1 2 Whitelist PRAD-US 0.62 0 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 13 68135648 68572445 3 5 222 2 0 1 0 2 0.3 0.85 5 0 0 5 4 5 11 6 6 28.5 64.76 35.24 0 0 1 Whitelist PRAD-US 5 0.93 0.99 0 0 0.59 0 Linked to high confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA Canonical without polyploidization 8 0.02 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 14 52969662 53076460 1 1 222 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 28.5 0.1 98.99 0 2 3 Whitelist PRAD-US 0.62 0.05 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 15 86786745 86982444 1 1 222 0 1 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 28.5 0 99.9 0 2 NA Whitelist PRAD-US 0.62 0.09 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 16 1488526 1820075 1 1 222 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 4 3 3 28.5 48.96 50.94 0 2 3 Whitelist PRAD-US 0.62 0.12 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 17 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 18 51246031 67010387 1 2 222 1 1 0 0 0 0.57 0.54 1 0 0 NA NA NA NA NA NA 28.5 2.77 97.19 0 2 NA Whitelist PRAD-US 0.68 0.77 0 0 0.64 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 4 0.01 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 19 17585690 17943390 1 1 222 0 0 0 1 0 0.39 0.14 1 NA NA NA NA NA NA NA NA 28.5 24.21 75.61 0 2 NA Whitelist PRAD-US 0.62 0.34 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 20 13481781 14499175 1 1 222 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 28.5 0 99.01 0 2 NA Whitelist PRAD-US 0.62 0.26 NA NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 21 16364103 29777341 6 7 222 2 1 1 2 1 0.88 0.02 12 0 0 12 12 12 12 12 12 28.5 26.49 50.86 0 1 2 Whitelist PRAD-US 0.96 0.08 0 0 0.91 0 High confidence PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA Canonical without polyploidization 13 0.03 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa 22 NA NA 0 0 222 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::c039014f-821c-43d6-9d3c-914f9c8d98fa X 6223420 6611422 1 1 222 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA NA NA NA 28.5 99.75 0.25 0 1 2 Whitelist PRAD-US 0.62 0.04 0.01 NA 0.59 0 No PRAD-US c039014f-821c-43d6-9d3c-914f9c8d98fa PRAD 0.85 1.96 Prost-AdenoCA NA 2 0 NA 2 PRAD-US DO36253 TCGA-CH-5788 c039014f-821c-43d6-9d3c-914f9c8d98fa male alive C61 69 NA 821 NA Included Prost-AdenoCA PRAD US 0 27.01 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 1 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 2 140924944 217210101 7 7 29 2 1 2 2 0 0.93 0 12 0 0 12 8 12 17 13 13 8.91 4.27 95.65 0 2 1 Whitelist PRAD-US 0.96 0 0 0 0.95 1 High confidence PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA Canonical without polyploidization 14 0.24 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 3 NA NA 0 0 29 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.9 NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 4 69201842 70924951 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 8.91 0.9 99.08 0 1 2 Whitelist PRAD-US 0.62 0.9 NA NA 0.59 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 5 22916751 100535800 1 3 29 2 0 0 1 0 0.3 0.03 5 0 0 5 5 5 5 5 5 8.91 5.92 93.97 0 2 1 Whitelist PRAD-US 0.62 0.12 0 0 0.59 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 6 0.1 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 7 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 1 NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 8 106204142 112092607 2 2 29 0 0 1 1 0 0.57 0.18 1 0 0 NA NA NA NA NA NA 8.91 0 99.99 0 2 NA Whitelist PRAD-US 0.68 0.4 0 0 0.64 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 9 9533740 10844557 2 2 29 1 0 0 1 0 0.57 0.1 2 0 0 NA NA NA 9 9 9 8.91 2.21 97.68 0 1 2 Whitelist PRAD-US 0.68 0.27 0 0 0.64 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 4 0.07 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 10 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 12 42456603 42476397 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.91 0.01 99.9 0 1 2 Whitelist PRAD-US 0.62 1 NA NA 0.59 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 13 39266614 89627446 1 1 29 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 8.91 43.73 42.12 0 1 2 Whitelist PRAD-US 0.62 0.51 NA NA 0.59 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 14 47524426 70047554 1 1 29 0 0 0 1 0 0.39 0.6 1 NA NA NA NA NA NA NA NA 8.91 1.56 82.53 0 2 NA Whitelist PRAD-US 0.62 0.82 NA NA 0.59 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::da5b0169-e4f4-4674-b348-220af03ff4b5 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 1 No PRAD-US da5b0169-e4f4-4674-b348-220af03ff4b5 PRAD 0.19 1.91 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO49815 TCGA-HC-8258 da5b0169-e4f4-4674-b348-220af03ff4b5 male alive C61 56 NA 66 NA Included Prost-AdenoCA PRAD US 0 2.17 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 1 176162991 231252097 1 3 36 3 0 0 0 0 0.03 0.76 1 0 0 NA NA NA NA NA NA 6.03 0 100 0 2 NA Whitelist PRAD-US 0.41 0.92 0 0 0.33 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 6 0.08 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 2 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 3 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 4 38900776 95194881 6 10 36 1 2 2 1 4 0.88 0 1 0 0 NA NA NA NA NA NA 6.03 0 99.8 3 2 NA Whitelist PRAD-US 0.86 0 0 0 0.91 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 16 0.22 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 5 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 6 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 7 66610946 71138115 1 1 36 1 0 0 0 0 0.39 0.04 2 0.04 NA NA NA NA NA NA NA 6.03 2.84 96.93 0 1 2 Whitelist PRAD-US 0.62 0.14 0.04 NA 0.59 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 8 89095267 90604348 1 1 36 0 1 0 0 0 0.39 0.71 2 NA NA NA NA NA 5 3 3 6.03 17.34 79.24 0 2 3 Whitelist PRAD-US 0.62 0.9 NA NA 0.59 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 2 0.03 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 9 NA NA 0 0 36 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.86 NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 10 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 11 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 1 NA NA NA 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 12 7240454 7264834 1 2 36 0 0 1 0 1 0.39 0.01 1 0 0 NA NA NA NA NA NA 6.03 0 99.92 0 2 NA Whitelist PRAD-US 0.68 0.03 0 0 0.59 0 No PRAD-US dc40cf49-b208-4f59-b5f0-cfbdd02970b2 PRAD 0.75 1.92 Prost-AdenoCA NA 3 0.04 NA 2 PRAD-US DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::dc40cf49-b208-4f59-b5f0-cfbdd02970b2 13 101223715 101908609 1 1 36 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.03 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DO36248 TCGA-CH-5750 dc40cf49-b208-4f59-b5f0-cfbdd02970b2 male alive C61 72 NA 396 NA Included Prost-AdenoCA PRAD US 0 13.03 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 1 NA NA 0 0 25 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.32 NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 2 NA NA 0 0 25 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.17 NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 3 45709074 122992994 1 3 25 0 1 1 0 1 0.57 0 3 0 0 NA NA NA NA NA NA 5.45 0.43 99.43 0 2 4 Whitelist PRAD-US 0.62 0 0 0 0.64 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 5 0.1 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 5 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 6 NA NA 0 0 25 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 1 NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 8 NA NA 0 0 25 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.62 NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 10 65455594 67541080 2 2 25 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 5.45 0.25 99.57 0 2 NA Whitelist PRAD-US 0.68 0 0 0 0.64 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 14 53008239 68107702 1 2 25 0 0 1 1 0 0.57 0 1 0 0 NA NA NA NA NA NA 5.45 0 84.08 0 2 NA Whitelist PRAD-US 0.68 0.01 0 0 0.64 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 16 56552732 67146988 1 2 25 2 0 0 0 0 0.11 0.14 4 NA 0 4 4 4 7 5 7 5.45 3.18 92.28 0 0 2 Whitelist PRAD-US 0.54 0.34 NA 0 0.48 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 4 0.08 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 TCGA-HC-7233 e2b33861-2247-413f-b2e5-9be3b604666c male alive C61 73 NA 52 NA Included Prost-AdenoCA PRAD US 0 1.71 PRAD-US::e2b33861-2247-413f-b2e5-9be3b604666c 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e2b33861-2247-413f-b2e5-9be3b604666c PRAD 0.24 1.92 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO46813 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NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 3 88536270 153879800 1 1 1 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 4.95 0 99.95 0 2 NA Whitelist PRAD-US 0.62 0.21 NA NA 0.59 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 2 1 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA NA NA NA NA 0 No PRAD-US e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 PRAD 0.97 1.93 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36335 TCGA-EJ-5506 e5e4d3b6-8e58-4dcf-8f67-a00e656a8e27 male alive C61 67 NA 356 NA Included Prost-AdenoCA PRAD US 0 11.71 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 1 151359396 156175195 2 6 133 0 0 2 0 4 0.11 0.05 5 0 0 5 5 5 11 11 11 7.5 1.05 98.63 0 1 2 Whitelist PRAD-US 0.54 0.16 0 0 0.48 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 8 0.03 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 2 64119891 235014658 3 11 133 2 0 0 1 8 0.3 0 3 0 0 NA NA NA 7 4 4 7.5 1.3 98.59 0 2 1 Whitelist PRAD-US 0.87 0.01 0 0 0.59 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 14 0.05 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 3 NA NA 0 0 133 0 0 0 0 0 NA 0.17 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.39 0 NA NA 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 4 78187765 166379036 1 3 133 2 1 0 0 0 0.3 0.04 5 0 0 5 5 5 5 5 5 7.5 0.1 99.86 0 2 4 Whitelist PRAD-US 0.62 0.13 0 0 0.59 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 6 0.02 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 5 NA NA 0 0 133 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.02 NA NA NA 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 6 87766263 107431907 5 7 133 2 0 0 3 2 0.14 0.1 7 0 0 7 7 7 11 11 11 7.5 2.65 97.11 0 2 1 Whitelist PRAD-US 0.77 0.26 0 0 0.59 1 High confidence PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA Canonical without polyploidization 12 0.05 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 7 89973314 112183054 1 2 133 0 0 1 0 1 0.39 0.85 3 0 NA NA NA NA 5 5 5 7.5 0.46 99.52 0 1 2 Whitelist PRAD-US 0.68 0.98 0 NA 0.59 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 8 25583518 25868811 1 2 133 0 0 0 1 1 0.39 0.01 1 0 NA NA NA NA 7 7 7 7.5 1.66 98.24 0 2 NA Whitelist PRAD-US 1 0.68 0.04 0 NA 0.59 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 3 0.01 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 9 NA NA 0 0 133 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.62 0 NA NA 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 10 59938517 98135181 7 8 133 1 2 2 2 1 0.93 0.01 5 0 0 5 5 5 5 5 5 7.5 2.88 96.82 0 2 1 Whitelist PRAD-US 1 0.03 0 0 0.95 1 Low confidence PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA Canonical without polyploidization 15 0.06 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 11 NA NA 0 0 133 0 0 0 0 0 NA 0.84 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist PRAD-US NA 0.97 0 NA NA 1 No PRAD-US f6381367-142c-45d0-92b3-c1727d1813ce PRAD 0.92 1.9 Prost-AdenoCA NA 0 0 NA 2 PRAD-US DO36283 TCGA-HC-7744 f6381367-142c-45d0-92b3-c1727d1813ce male alive C61 46 NA 51 NA Included Prost-AdenoCA PRAD US 0 1.68 PRAD-US::f6381367-142c-45d0-92b3-c1727d1813ce 12 74408344 99557210 1 2 133 1 0 0 0 1 0.39 0.22 1 NA NA NA NA NA NA NA NA 7.5 0 99.92 0 2 NA 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TCGA-AG-A032 0bb786ee-07cf-4853-9b49-ec95cd14e282 male alive C20 68 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::0bb786ee-07cf-4853-9b49-ec95cd14e282 7 53826240 54758788 1 3 46 1 0 1 0 1 0.57 0 3 0 0 NA NA NA 13 13 13 79.6 99.78 0 0 3 4 Whitelist READ-US 0.87 0 0 0 0.64 0 No READ-US 0bb786ee-07cf-4853-9b49-ec95cd14e282 READ 0.66 3.33 ColoRect-AdenoCA NA 5 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 READ-US DO36945 TCGA-AG-A032 0bb786ee-07cf-4853-9b49-ec95cd14e282 male alive C20 68 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::0bb786ee-07cf-4853-9b49-ec95cd14e282 8 109956347 132969965 2 2 46 1 0 1 0 0 0.57 0 5 0 0 5 5 5 14 14 14 79.6 99.85 0 0 3 4 Whitelist READ-US 0.68 0 0 0 0.64 0 No READ-US 0bb786ee-07cf-4853-9b49-ec95cd14e282 READ 0.66 3.33 ColoRect-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 READ-US DO36945 TCGA-AG-A032 0bb786ee-07cf-4853-9b49-ec95cd14e282 male alive C20 68 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::0bb786ee-07cf-4853-9b49-ec95cd14e282 9 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 0bb786ee-07cf-4853-9b49-ec95cd14e282 READ 0.66 3.33 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 READ-US DO36945 TCGA-AG-A032 0bb786ee-07cf-4853-9b49-ec95cd14e282 male alive C20 68 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::0bb786ee-07cf-4853-9b49-ec95cd14e282 10 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 0bb786ee-07cf-4853-9b49-ec95cd14e282 READ 0.66 3.33 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 READ-US DO36945 TCGA-AG-A032 0bb786ee-07cf-4853-9b49-ec95cd14e282 male alive C20 68 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::0bb786ee-07cf-4853-9b49-ec95cd14e282 11 NA NA 0 0 46 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 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frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 17 62471130 62526570 1 5 71 0 0 0 2 3 0.11 0 4 0 0 4 3 4 14 4 4 86.02 73.47 26.5 0 7 6 Whitelist READ-US 0.68 0 0 0 0.48 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 7 0.05 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 18 NA NA 0 0 71 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.9 NA NA NA 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 0 0 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 19 1408029 39389106 1 2 71 0 1 1 0 0 0.57 0.65 4 NA 0.04 4 4 4 5 5 5 86.02 99.83 0 0 4 5 Whitelist READ-US 0.68 0.86 NA 0.04 0.64 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 4 0.03 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 20 33144114 55273563 2 4 71 0 0 1 1 2 0.57 0 7 0 0 7 3 7 17 6 12 86.02 69.02 23.61 0 5 7 Whitelist READ-US 0.68 0 0 0 0.64 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 6 0.04 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 21 NA NA 0 0 71 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist READ-US NA 0.81 NA NA NA 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 0 0 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 22 NA NA 0 0 71 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 0 0 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::10290e91-9784-4f94-8daa-b5d9a8b0efb9 X 131930852 132014102 1 1 71 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA 4 3 3 86.02 99.77 0 0 1 4 Whitelist READ-US 0.62 0.51 NA NA 0.59 0 No READ-US 10290e91-9784-4f94-8daa-b5d9a8b0efb9 READ 0.69 3.58 ColoRect-AdenoCA NA 2 0.01 frameshift_insertion,17_7577605_AACCT_-,CN:2 3 READ-US DO36801 TCGA-AG-3593 10290e91-9784-4f94-8daa-b5d9a8b0efb9 female alive C19 72 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 1 32651575 117559110 44 44 306 10 16 9 9 0 0.38 0 53 0 0 53 53 53 54 54 54 60.29 50.3 49.7 0 2 3 Whitelist READ-US 0.62 0 0 0 0.59 1 High confidence READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA Canonical without polyploidization 88 0.14 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 2 186769033 186885531 1 1 306 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 60.29 99.86 0.05 0 2 3 Whitelist READ-US 0.62 0 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 3 60119956 60132583 1 1 306 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 60.29 99.88 0 0 3 4 Whitelist READ-US 0.62 0 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 4 131481566 131496889 1 1 306 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 60.29 0 99.79 0 2 NA Whitelist READ-US 0.62 0 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 5 12567802 128104359 1 2 306 2 0 0 0 0 0.11 0 4 0 0.08 4 4 4 6 6 6 60.29 0.43 99.43 0 1 2 Whitelist READ-US 0.54 0 0 0.08 0.48 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 6 1604791 2228847 4 4 306 2 2 0 0 0 0.26 0.01 3 0.03 0 NA NA NA 7 5 5 60.29 96.52 0.32 0 3 2 Whitelist READ-US 0.62 0.05 0.03 0 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 8 0.01 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 7 NA NA 0 0 306 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0 0 NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 8 82374794 83606255 1 1 306 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 3 4 60.29 71.77 28.22 0 3 4 Whitelist READ-US 0.62 0 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 9 NA NA 0 0 306 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 4 5 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 10 73354513 106587207 1 2 306 2 0 0 0 0 0.11 0 4 0.01 0 4 4 4 8 5 5 60.29 28.31 68.15 0 1 2 Whitelist READ-US 0.54 0.01 0.01 0 0.48 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 11 NA NA 0 0 306 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0 NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 12 361015 132561817 179 179 306 42 44 46 47 0 0.95 0 129 0 0 129 17 49 129 17 17 60.29 39.42 56.84 44 2 3 Whitelist READ-US 0.97 0 0 0 0.97 1 High confidence READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA With other complex events 358 0.58 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 13 NA NA 0 0 306 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 14 NA NA 0 0 306 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 15 NA NA 0 0 306 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.02 NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 16 6524428 79102187 1 2 306 2 0 0 0 0 0.11 0.07 4 0.12 0 4 4 4 5 5 5 60.29 99.52 0.38 0 2 3 Whitelist READ-US 0.54 0.21 0.12 0 0.48 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 17 NA NA 0 0 306 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA 5 4 5 0 0 0 0 0 0 Whitelist READ-US NA 0.22 NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 18 37442356 37635758 1 1 306 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 5 3 3 60.29 0.68 99.28 0 1 2 Whitelist READ-US 0.62 0.21 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 19 30691787 30750395 1 1 306 0 0 1 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 60.29 48.09 51.73 0 4 5 Whitelist READ-US 0.62 0.34 NA NA 0.59 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 20 22183728 46861999 2 4 306 1 3 0 0 0 0.11 0.55 8 0 0 8 3 4 16 3 4 60.29 98.79 0.22 0 3 7 Whitelist READ-US 0.54 0.78 0 0 0.48 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 8 0.01 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 21 21231971 30536463 23 23 306 7 4 7 5 0 0.76 0 24 0 0 24 10 10 31 10 10 60.29 17.89 52.4 3 2 5 Whitelist READ-US 0.86 0 0 0 0.84 1 High confidence READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA With other complex events 46 0.08 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 22 NA NA 0 0 306 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 1 NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1388bba1-02ba-40df-93e5-c3d58b7bbae0 X NA NA 0 0 306 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 1 No READ-US 1388bba1-02ba-40df-93e5-c3d58b7bbae0 READ 0.82 2.94 ColoRect-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 2 READ-US DO36459 TCGA-AG-4015 1388bba1-02ba-40df-93e5-c3d58b7bbae0 female alive C18.9 85 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 1 4239768 34550742 1 2 20 2 0 0 0 0 0.11 0.67 4 NA 0 4 3 4 5 3 3 5.68 12.16 87.84 0 1 0 Whitelist READ-US 0.54 0.87 NA 0 0.48 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 4 0.1 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 3 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 1 NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 4 59926423 110456948 2 2 20 0 0 1 1 0 0.57 0.39 1 NA 0 NA NA NA NA NA NA 5.68 0 99.99 0 2 NA Whitelist READ-US 0.68 0.64 NA 0 0.64 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 4 0.1 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 5 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 1 NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 6 99232447 158673590 1 2 20 2 0 0 0 0 0.11 0.34 4 NA 0 4 4 4 5 5 5 5.68 1.55 98.29 0 1 2 Whitelist READ-US 0.54 0.59 NA 0 0.48 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 4 0.1 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 7 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 1 NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 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READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 17 NA NA 0 0 20 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.67 NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 19 8184354 8210941 1 1 20 0 0 1 0 0 0.39 0.06 1 NA 0 NA NA NA NA NA NA 5.68 0 99.83 0 2 NA Whitelist READ-US 0.62 0.18 NA 0 0.59 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 2 0.05 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 20 NA NA 0 0 20 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.2 NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::1586cb0a-081a-4364-9470-46f9d0f0167d X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 1586cb0a-081a-4364-9470-46f9d0f0167d READ 0.46 1.94 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO36572 TCGA-AG-3901 1586cb0a-081a-4364-9470-46f9d0f0167d female alive C19 67 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 1 22814298 23308792 1 1 72 0 1 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 82.67 100 0 0 3 5 Whitelist READ-US 0.62 0.32 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 2 77764479 213154692 1 4 72 4 0 0 0 0 0.01 0.83 5 0 0 5 5 5 6 5 6 82.67 82.33 17.54 0 4 3 Whitelist READ-US 0.21 0.97 0 0 0.16 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 8 0.06 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 3 14218689 14518795 1 1 72 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 82.67 99.97 0 0 3 4 Whitelist READ-US 0.62 0.48 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 4 116849850 181970286 1 2 72 1 1 0 0 0 0.57 0.24 4 NA 0 4 3 4 7 3 3 82.67 99.86 0.13 0 3 2 Whitelist READ-US 0.68 0.48 NA 0 0.64 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 4 0.03 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 5 59153435 59522253 3 3 72 2 0 0 1 0 0.3 0.46 8 0 0 8 4 7 8 4 7 82.67 99.81 0.06 0 2 3 Whitelist READ-US 0.62 0.7 0 0 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 6 0.04 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 6 162463536 162942490 1 2 72 1 0 0 1 0 0.57 0.8 5 0 0 5 5 5 5 5 5 82.67 99.69 0.17 0 3 2 Whitelist READ-US 0.68 0.95 0 0 0.64 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 4 0.03 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 7 12060998 12087742 1 1 72 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 82.67 99.76 0.02 0 2 4 Whitelist READ-US 0.62 0.41 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 8 205410 133094503 1 2 72 1 0 0 1 0 0.57 0.59 6 NA 0 6 3 6 7 3 7 82.67 63.67 36.21 0 4 2 Whitelist READ-US 0.68 0.81 NA 0 0.64 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 4 0.03 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 9 80925236 81121817 1 1 72 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA 5 5 5 82.67 96.89 0 0 3 4 Whitelist READ-US 0.62 0.76 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 10 88231033 119122652 1 1 72 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 82.67 77.04 22.79 0 2 4 Whitelist READ-US 0.62 0.51 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 11 2136028 2241078 1 1 72 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 82.67 99.44 0 0 3 5 Whitelist READ-US 0.62 0.51 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 12 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 13 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 14 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 15 81082097 81286702 1 1 72 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 82.67 99.67 0.2 0 2 3 Whitelist READ-US 0.62 0.9 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 16 6562019 6882335 1 2 72 2 0 0 0 0 0.11 0.72 4 NA 0 4 3 4 5 3 3 82.67 99.66 0.25 0 3 2 Whitelist READ-US 0.54 0.9 NA 0 0.48 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 4 0.03 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 17 28133401 66354370 11 17 72 2 4 3 2 6 0.8 0 22 0 0 22 4 7 32 4 7 82.67 45.21 50.36 4 4 3 Whitelist READ-US 0.68 0 0 0 0.84 0 Low confidence READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA With other complex events 28 0.19 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 18 42376253 42485554 1 1 72 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 82.67 0.14 99.82 0 0 2 Whitelist READ-US 0.62 1 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 19 15584261 46088933 3 8 72 2 1 0 0 5 0.3 0 2 0 0 NA NA NA 5 5 5 82.67 99.83 0 0 3 4 Whitelist READ-US 0.87 0 0 0 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 11 0.08 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 20 14652098 31002822 1 4 72 2 1 0 1 0 0.57 0 10 0 0 10 3 5 10 3 5 82.67 53.32 38 0 2 6 Whitelist READ-US 0.68 0 0 0 0.64 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 8 0.06 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 21 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 22 NA NA 0 0 72 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 0 0 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::335d0351-3740-4847-9ff4-be2f078c70f7 X 56636514 56842173 1 1 72 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 82.67 99.64 0.13 10 2 4 Whitelist READ-US 0.62 0.81 NA NA 0.59 0 No READ-US 335d0351-3740-4847-9ff4-be2f078c70f7 READ 0.62 3.26 ColoRect-AdenoCA NA 2 0.01 stopgain,17_7578212_A_G,CN:2 3 READ-US DO36822 TCGA-AF-2689 335d0351-3740-4847-9ff4-be2f078c70f7 female alive C19 41 NA 482 NA Included ColoRect-AdenoCA READ US 0 15.86 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 1 NA NA 0 0 82 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist READ-US NA 0.08 NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 2 77740733 78034619 1 1 82 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 4 88.1 99.9 0 0 3 4 Whitelist READ-US 0.62 0.15 NA NA 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 3 59763358 61211010 1 3 82 3 0 0 0 0 0.03 1 6 0 0 6 3 4 7 4 4 88.1 99.87 0.08 0 3 4 Whitelist READ-US 0.41 1 0 0 0.33 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 4 143635020 181123146 1 5 82 1 1 0 1 2 0.8 1 4 0 0 4 3 4 7 3 5 88.1 99.8 0 0 4 5 Whitelist READ-US 0.93 1 0 0 0.84 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 5 1041120 112124739 1 5 82 4 1 0 0 0 0.04 0.65 13 0 0 13 5 7 14 5 7 88.1 99.58 0.19 0 3 4 Whitelist READ-US 0.45 0.86 0 0 0.36 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 10 0.06 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 6 129711748 146808926 2 4 82 0 0 1 1 2 0.57 0 10 0 0 10 5 10 17 8 17 88.1 94.01 5.86 0 2 4 Whitelist READ-US 0.68 0 0 0 0.64 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 7 110156443 132983671 1 3 82 3 0 0 0 0 0.03 1 6 0 0 6 3 5 7 3 5 88.1 99.69 0.04 0 4 2 Whitelist READ-US 0.41 1 0 0 0.33 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 8 36339374 145963211 1 6 82 3 2 0 0 1 0.14 0.07 12 0 0 12 4 5 16 4 4 88.1 75.29 24.43 0 7 3 Whitelist READ-US 0.54 0.21 0 0 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 11 0.07 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 9 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 10 1129711 124167500 1 3 82 2 1 0 0 0 0.3 1 6 0.04 0 6 3 4 7 3 5 88.1 99.72 0.1 0 4 2 Whitelist READ-US 0.62 1 0.04 0 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 11 16540314 16859757 1 1 82 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 88.1 99.57 0 0 4 NA Whitelist READ-US 0.62 0.41 NA NA 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 12 61116779 79930239 9 18 82 3 4 1 1 9 0.39 0 17 0 0 17 3 8 18 3 8 88.1 95.4 4.51 1 1 4 Whitelist READ-US 0.68 0 0 0 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 27 0.16 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 13 73425013 96532058 2 2 82 0 0 1 1 0 0.57 0.37 4 0 0 4 4 4 9 5 9 88.1 83.06 0 0 5 6 Whitelist READ-US 0.68 0.62 0 0 0.64 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 14 NA NA 0 0 82 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.76 NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 15 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 16 6223460 6891728 2 2 82 2 0 0 0 0 0.11 0.01 11 0 0 11 9 10 14 9 9 88.1 99.63 0.27 0 2 1 Whitelist READ-US 0.54 0.03 0 0 0.48 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 17 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 18 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 19 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist 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READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a 22 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::72802851-9340-4c5f-a90b-23b7afd7577a X 112880949 112940184 1 1 82 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 88.1 100 0 0 5 NA Whitelist READ-US 0.62 0.69 NA NA 0.59 0 No READ-US 72802851-9340-4c5f-a90b-23b7afd7577a READ 0.54 4.06 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578478_T_G,CN:2 4 READ-US DO36386 TCGA-AG-4008 72802851-9340-4c5f-a90b-23b7afd7577a male alive C18.9 63 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::830fd359-abd4-4c99-89e4-2d6bb9ce5637 1 41172314 41202278 1 1 18 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA 6 4 4 91.58 100 0 0 1 4 Whitelist READ-US 0.62 0.86 NA NA 0.59 0 No READ-US 830fd359-abd4-4c99-89e4-2d6bb9ce5637 READ 0.28 3.91 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7577530_A_T,CN:2 3 READ-US DO36969 TCGA-AF-2691 830fd359-abd4-4c99-89e4-2d6bb9ce5637 female alive C19 48 NA 323 NA Included ColoRect-AdenoCA READ US 0 10.62 READ-US::830fd359-abd4-4c99-89e4-2d6bb9ce5637 2 124967233 132634726 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 91.58 96.84 3.15 0 2 4 Whitelist READ-US 0.62 1 NA NA 0.59 0 No READ-US 830fd359-abd4-4c99-89e4-2d6bb9ce5637 READ 0.28 3.91 ColoRect-AdenoCA NA 2 0.06 nonsynonymous_SNV,17_7577530_A_T,CN:2 3 READ-US DO36969 TCGA-AF-2691 830fd359-abd4-4c99-89e4-2d6bb9ce5637 female alive C19 48 NA 323 NA Included ColoRect-AdenoCA READ US 0 10.62 READ-US::830fd359-abd4-4c99-89e4-2d6bb9ce5637 3 44276658 87376927 1 1 18 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 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alive C18.9 87 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::8e00e7e7-ffaf-44f0-91a7-172671f18e08 17 26926287 80606072 11 13 126 1 4 3 3 2 0.63 0 7 0 0 7 4 7 8 4 7 88.64 67.5 27.33 2 5 4 Whitelist READ-US 18 0.68 0 0 0 0.71 0 Low confidence READ-US 8e00e7e7-ffaf-44f0-91a7-172671f18e08 READ 0.69 3.49 ColoRect-AdenoCA With other complex events 24 0.1 nonsynonymous_SNV,17_7578551_G_A,CN:2 3 READ-US DO37074 TCGA-AG-4007 8e00e7e7-ffaf-44f0-91a7-172671f18e08 male alive C18.9 87 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::8e00e7e7-ffaf-44f0-91a7-172671f18e08 18 20312665 35616752 1 7 126 1 0 1 0 5 0.57 0 5 0 0 5 5 5 9 7 7 88.64 5.01 90.34 0 2 6 Whitelist READ-US 8 0.77 0 0 0 0.64 0 Linked to low confidence READ-US 8e00e7e7-ffaf-44f0-91a7-172671f18e08 READ 0.69 3.49 ColoRect-AdenoCA With other complex events 9 0.04 nonsynonymous_SNV,17_7578551_G_A,CN:2 3 READ-US DO37074 TCGA-AG-4007 8e00e7e7-ffaf-44f0-91a7-172671f18e08 male alive C18.9 87 NA 31 NA Included 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NA 88.64 77.35 0 0 1 3 Whitelist READ-US 0.62 1 NA NA 0.59 0 No READ-US 8e00e7e7-ffaf-44f0-91a7-172671f18e08 READ 0.69 3.49 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578551_G_A,CN:2 3 READ-US DO37074 TCGA-AG-4007 8e00e7e7-ffaf-44f0-91a7-172671f18e08 male alive C18.9 87 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::8e00e7e7-ffaf-44f0-91a7-172671f18e08 22 NA NA 0 0 126 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.87 NA NA NA 0 No READ-US 8e00e7e7-ffaf-44f0-91a7-172671f18e08 READ 0.69 3.49 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578551_G_A,CN:2 3 READ-US DO37074 TCGA-AG-4007 8e00e7e7-ffaf-44f0-91a7-172671f18e08 male alive C18.9 87 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::8e00e7e7-ffaf-44f0-91a7-172671f18e08 X 6884576 6902902 1 1 126 1 0 0 0 0 0.39 0.22 2 NA NA NA NA NA 9 5 5 88.64 30.22 69.78 0 1 2 Whitelist READ-US 0.62 0.45 NA NA 0.59 0 No READ-US 8e00e7e7-ffaf-44f0-91a7-172671f18e08 READ 0.69 3.49 ColoRect-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578551_G_A,CN:2 3 READ-US DO37074 TCGA-AG-4007 8e00e7e7-ffaf-44f0-91a7-172671f18e08 male alive C18.9 87 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 1 49949850 209579112 2 8 603 2 0 2 2 2 0.57 0.45 5 0 0 5 5 5 9 9 9 1.63 0.1 99.9 0 2 3 Whitelist READ-US 0.62 0.69 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 14 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 2 126985505 165436027 5 5 603 2 1 1 1 0 0.9 0.11 7 0 0 7 5 7 21 5 9 1.63 0.16 99.73 0 2 1 Whitelist READ-US 0.93 0.28 0 0 0.92 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 10 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 3 60103543 60650685 6 6 603 6 0 0 0 0 0 0 9 0 0 9 5 9 25 10 10 1.63 0.73 98.78 0 1 2 Whitelist READ-US 0.04 0 0 0 0.03 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 12 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 4 176112599 176124018 2 2 603 0 0 1 1 0 0.57 0.57 1 0 0 NA NA NA 9 3 3 1.63 16.57 83.33 0 2 NA Whitelist READ-US 0.68 0.79 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 5 58483893 143865387 2 10 603 4 4 0 0 2 0.05 0.04 7 0 0 7 5 7 17 8 8 1.63 5.7 94.15 0 2 1 Whitelist READ-US 0.62 0.13 0 0 0.46 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 18 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 6 1750031 162731368 1 24 603 3 20 1 0 0 0 0.61 10 0 0 10 8 8 10 8 8 1.63 0.21 99.55 0 2 3 Whitelist READ-US 0 0.82 0 0 0 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 48 0.04 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 7 142131690 142230931 2 2 603 0 2 0 0 0 0.11 0.72 1 0 0 NA NA NA 9 9 9 1.63 0.12 99.66 0 2 NA Whitelist READ-US 0.54 0.9 0 0 0.48 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 8 100967694 114795284 2 2 603 1 1 0 0 0 0.57 0.26 1 0 0 NA NA NA NA NA NA 1.63 0.02 99.98 0 2 NA Whitelist READ-US 0.68 0.51 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 9 5377963 140040730 1 17 603 0 13 2 0 2 0 0.6 7 0 0 7 3 7 10 4 6 1.63 2.21 97.09 0 2 3 Whitelist READ-US 0 0.81 0 0 0 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 32 0.03 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 10 35676061 35710992 2 2 603 0 0 1 1 0 0.57 0.01 1 0 0 NA NA NA 5 5 5 1.63 0.13 99.69 0 2 NA Whitelist READ-US 0.68 0.05 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 11 126294900 126450710 4 4 603 0 1 2 1 0 0.57 0.92 3 0 0 NA NA NA 13 5 5 1.63 0.63 98.94 0 2 3 Whitelist READ-US 0.68 1 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 8 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 12 7559045 87392793 2 6 603 0 0 3 3 0 0.11 0.77 5 0 0 5 3 5 7 5 7 1.63 0.09 99.83 0 2 3 Whitelist READ-US 0.54 0.93 0 0 0.48 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 12 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 13 85535645 103334024 2 2 603 0 0 1 1 0 0.57 0.82 3 0 0 NA NA NA 7 7 7 1.63 0.08 99.92 0 2 3 Whitelist READ-US 0.68 0.96 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 14 24572183 91604549 1 11 603 1 8 0 0 2 0 0.56 5 0 0 5 3 5 5 3 3 1.63 0.45 98.64 0 2 1 Whitelist READ-US 0.02 0.79 0 0 0.02 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 20 0.02 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 15 28098710 94910079 1 15 603 1 12 0 0 2 0 0.71 3 0 0 NA NA NA 4 3 4 1.63 0.04 95.18 0 2 3 Whitelist READ-US 2 0.01 0.9 0 0 0 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 28 0.02 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 16 83558960 86404787 5 5 603 1 2 1 1 0 0.9 0.01 3 0 0 NA NA NA 13 7 7 1.63 0.64 98.84 0 2 3 Whitelist READ-US 0.93 0.05 0 0 0.92 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 10 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 17 1092336 58372961 1 5 603 1 4 0 0 0 0.04 0.01 5 0 0 5 4 5 6 5 6 1.63 0.11 95.44 0 2 1 Whitelist READ-US 0.45 0.03 0 0 0.36 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 10 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 18 61188080 61250831 2 2 603 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 1.63 0.15 99.81 0 2 NA Whitelist READ-US 0.68 1 0 0 0.64 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 19 3384163 58907187 1 7 603 0 5 0 0 2 0 1 2 0 0 NA NA NA NA NA NA 1.63 0.05 99.4 0 2 3 Whitelist READ-US 1 0.47 1 0 0 0.07 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 12 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 20 14703946 59468548 1 8 603 1 7 0 0 0 0 0.67 7 0 0 7 5 7 7 5 7 1.63 0.61 98.42 0 2 4 Whitelist READ-US 0.06 0.88 0 0 0.04 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 16 0.01 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 21 19756017 34914238 1 2 603 0 2 0 0 0 0.11 0.13 1 0 0 NA NA NA NA NA NA 1.63 0 77.65 0 2 NA Whitelist READ-US 0.54 0.33 0 0 0.48 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 4 0 NA 2 READ-US DO36556 TCGA-F5-6814 8feb0e8f-d09b-437d-8651-0cdecfe776bf male alive C20 57 NA 16 NA Included ColoRect-AdenoCA READ US 0 0.53 READ-US::8feb0e8f-d09b-437d-8651-0cdecfe776bf 22 21249133 46537308 1 3 603 0 3 0 0 0 0.03 0.34 4 0 0 4 4 4 5 5 5 1.63 0.37 99.63 0 2 3 Whitelist READ-US 0.41 0.59 0 0 0.33 0 No READ-US 8feb0e8f-d09b-437d-8651-0cdecfe776bf READ 0.75 1.99 ColoRect-AdenoCA NA 6 0 NA 2 READ-US DO36556 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READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 2 51734593 236864749 1 9 89 6 1 0 0 2 0 0.09 8 0 0 8 6 6 9 6 6 47.24 47.42 52.48 0 2 3 Whitelist READ-US 0.41 0.24 0 0 0.09 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 16 0.09 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 3 60281164 188938070 1 4 89 4 0 0 0 0 0.01 0.29 6 0 0 6 6 6 7 7 7 47.24 99.85 0.1 0 2 3 Whitelist READ-US 0.21 0.54 0 0 0.16 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 8 0.04 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 4 29823720 29910797 1 1 89 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 4 3 3 47.24 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3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 16 6177607 7133737 3 3 89 3 0 0 0 0 0.03 0.09 5 0 0 5 3 5 9 3 4 47.24 99.35 0.54 0 1 2 Whitelist READ-US 0.41 0.25 0 0 0.33 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 6 0.03 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 17 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 18 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 19 NA NA 0 0 89 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US 9af35239-ffb9-4d4f-889e-f743da271eef READ 0.64 2.52 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578454_A_G,CN:2 3 READ-US DO37259 TCGA-AG-3896 9af35239-ffb9-4d4f-889e-f743da271eef female alive C20 85 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::9af35239-ffb9-4d4f-889e-f743da271eef 20 14694871 15096752 6 6 89 4 0 1 1 0 0.11 0 4 0 0 4 4 4 12 5 5 47.24 88.63 10.37 0 1 2 Whitelist READ-US 0.54 0 0 0 0.48 0 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3 Whitelist READ-US 0.68 0.93 NA 0 0.64 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 4 0.03 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 10 53229666 104032814 1 3 76 1 2 0 0 0 0.3 1 2 0 0 NA NA NA NA NA NA 74.62 99.67 0.14 0 2 3 Whitelist READ-US 0.62 1 0 0 0.59 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 6 0.04 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 11 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 0 0 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive 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READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 17 12727326 32065076 3 3 76 1 2 0 0 0 0.3 0 9 0 0 9 3 5 16 3 6 74.62 36.23 59.33 0 4 3 Whitelist READ-US 0.62 0.02 0 0 0.59 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 6 0.04 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 18 NA NA 0 0 76 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.9 NA NA NA 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 0 0 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 19 38804743 44800011 1 2 76 0 0 1 0 1 0.39 0.06 3 NA NA NA NA NA 7 4 4 74.62 99.83 0 0 3 4 Whitelist READ-US 0.68 0.19 NA NA 0.59 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 3 0.02 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 20 14522784 15203005 2 2 76 2 0 0 0 0 0.11 0 6 0 0 6 3 5 13 4 4 74.62 92.51 0.35 0 2 3 Whitelist READ-US 0.54 0 0 0 0.48 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 4 0.03 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 21 NA NA 0 0 76 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 0 0 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 22 NA NA 0 0 76 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.81 NA NA NA 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 0 0 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::db1e3104-8bfd-4353-854a-c478ba1f7d07 X 7350423 70873714 1 4 76 4 0 0 0 0 0.01 0.79 6 0 0 6 6 6 7 7 7 74.62 99.8 0.2 0 2 3 Whitelist READ-US 0.21 0.95 0 0 0.16 0 No READ-US db1e3104-8bfd-4353-854a-c478ba1f7d07 READ 0.75 3.05 ColoRect-AdenoCA NA 8 0.05 NA 3 READ-US DO36710 TCGA-AG-3582 db1e3104-8bfd-4353-854a-c478ba1f7d07 male alive C18.9 75 NA 31 NA Included ColoRect-AdenoCA READ US 0 1.02 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 1 9491249 212866822 1 8 160 5 1 0 1 1 0.04 0.56 8 0 0 8 3 8 9 3 9 72.36 87.38 12.62 2 2 3 Whitelist READ-US 0.28 0.78 0 0 0.38 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 15 0.05 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 2 18369748 224149589 1 8 160 7 1 0 0 0 0 0.15 16 0 0 16 10 10 17 10 10 72.36 92.97 4.43 1 3 4 Whitelist READ-US 0.06 0.35 0 0 0.04 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 16 0.05 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 3 41431433 175470858 1 7 160 4 1 0 0 2 0.04 0.44 12 0 0 12 5 8 13 5 5 72.36 99.82 0.06 2 3 1 Whitelist READ-US 18 0.62 0.69 0 0 0.36 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 12 0.04 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 4 34608183 34870395 2 2 160 0 0 1 1 0 0.57 0.11 5 0 0 5 3 5 22 7 14 72.36 78.76 18.87 0 2 0 Whitelist READ-US 0.68 0.29 0 0 0.64 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 4 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 5 52372824 60181728 8 8 160 1 2 2 3 0 0.8 0 6 0 0 6 4 4 36 7 13 72.36 52.51 44.8 4 2 3 Whitelist READ-US 0.87 0 0 0 0.84 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 16 0.05 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 6 5154923 163120347 2 4 160 2 0 1 1 0 0.57 0.32 10 0 0 10 4 5 11 5 5 72.36 83.8 16.05 0 3 2 Whitelist READ-US 0.68 0.57 0 0 0.64 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 8 0.02 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 7 26865597 148368697 1 8 160 8 0 0 0 0 0 0.6 12 0 0 12 3 5 15 3 5 72.36 97.33 0.11 0 4 2 Whitelist READ-US 0.01 0.81 0 0 0 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 16 0.05 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 8 56708636 56935207 2 5 160 0 0 1 1 3 0.57 0.72 5 0 0 5 3 5 11 3 5 72.36 55.6 44.4 0 2 3 Whitelist READ-US 11 0.68 0.9 0 0 0.64 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 7 0.02 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 9 561632 134180407 1 7 160 2 4 1 0 0 0.17 0.42 16 0 0 16 4 8 18 6 6 72.36 95.67 1.21 0 4 2 Whitelist READ-US 0.62 0.66 0 0 0.59 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 14 0.04 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 10 52830921 55099172 2 4 160 2 1 0 1 0 0.57 0.71 3 0 0 NA NA NA 8 5 8 72.36 91.41 8.41 4 3 2 Whitelist READ-US 0.68 0.9 0 0 0.64 0 No READ-US 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READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 13 19176863 91407141 1 11 160 8 1 0 1 1 0 0.01 11 0 0 11 7 9 11 7 9 72.36 99.98 0.02 0 4 3 Whitelist READ-US 0.03 0.06 0 0 0.05 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 21 0.07 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 14 25155649 55628247 1 2 160 2 0 0 0 0 0.11 0.25 2 NA 0 NA NA NA 4 3 3 72.36 0.06 96.23 0 0 2 Whitelist READ-US 0.54 0.49 NA 0 0.48 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 4 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 15 67431749 71413707 1 2 160 2 0 0 0 0 0.11 0.34 2 NA 0 NA NA NA NA NA NA 72.36 0.4 99.45 0 1 2 Whitelist READ-US 0.54 0.59 NA 0 0.48 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 4 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 16 69462655 69515215 1 1 160 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 5 5 5 72.36 99.42 0.46 0 2 4 Whitelist READ-US 0.62 1 0 NA 0.59 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 2 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 17 9720909 9877796 2 2 160 1 1 0 0 0 0.57 0.46 2 NA 0 NA NA NA 5 3 3 72.36 80.37 15.18 0 2 3 Whitelist READ-US 0.68 0.7 NA 0 0.64 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 4 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 18 52344655 52491321 3 3 160 1 0 1 1 0 0.8 0.04 4 0 0 4 4 4 9 7 9 72.36 2.45 97.52 0 1 2 Whitelist READ-US 0.87 0.14 0 0 0.84 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 6 0.02 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 19 NA NA 0 0 160 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.63 NA NA NA 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 0 0 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 20 15625649 60603970 1 6 160 3 1 1 1 0 0.57 0.09 12 0 0 12 3 5 13 3 5 72.36 92.31 0 1 7 5 Whitelist READ-US 0.68 0.25 0 0 0.64 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 12 0.04 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 21 24512534 26922520 1 2 160 2 0 0 0 0 0.11 0.45 3 NA 0 NA NA NA 6 3 3 72.36 77.35 0 1 1 0 Whitelist READ-US 0.54 0.7 NA 0 0.48 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 4 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 22 24022738 24199181 1 1 160 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 5 5 5 72.36 99.64 0.36 0 2 3 Whitelist READ-US 0.62 0.9 NA NA 0.59 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 2 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e2d395f8-bf13-4fe4-8031-683b0eedd875 X 95889648 95909841 1 1 160 1 0 0 0 0 0.39 0.2 1 0 NA NA NA NA NA NA NA 72.36 1.74 98.26 0 2 NA Whitelist READ-US 0.62 0.42 0.01 NA 0.59 0 No READ-US e2d395f8-bf13-4fe4-8031-683b0eedd875 READ 0.54 3.12 ColoRect-AdenoCA NA 2 0.01 frameshift_insertion,17_7574023_T_-,CN:3 3 READ-US DO36431 TCGA-AG-3890 e2d395f8-bf13-4fe4-8031-683b0eedd875 male alive C20 62 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 1 28683058 28696383 1 1 33 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 85.86 100 0 0 3 5 Whitelist READ-US 0.62 0.91 NA NA 0.59 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 2 44421039 45070724 3 3 33 1 0 1 1 0 0.8 0.19 3 0 0 NA NA NA 5 5 5 85.86 99.5 0.39 1 3 2 Whitelist READ-US 0.87 0.42 0 0 0.84 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 6 0.09 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 3 60179176 60231436 1 1 33 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 85.86 52.52 44.31 0 1 2 Whitelist READ-US 0.62 0.9 NA NA 0.59 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 4 10382037 42930071 1 2 33 2 0 0 0 0 0.11 0.48 6 0.09 0 6 3 6 7 3 7 85.86 99.7 0.29 0 3 1 Whitelist READ-US 0.54 0.73 0.09 0 0.48 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 4 0.06 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 5 NA NA 0 0 33 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.9 NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 6 130377182 130455990 1 1 33 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 85.86 99.76 0 0 3 NA Whitelist READ-US 0.62 0.9 NA NA 0.59 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 7 37823616 133058608 1 5 33 4 0 0 0 1 0.01 0.03 10 0 0 10 5 8 12 5 5 85.86 99.78 0 0 5 6 Whitelist READ-US 0.45 0.11 0 0 0.16 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 9 0.14 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 8 33164306 134522320 1 4 33 0 0 0 2 2 0.11 0.02 5 0 0 5 3 5 9 7 9 85.86 96.41 0.02 0 3 1 Whitelist READ-US 0.54 0.1 0 0 0.48 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 6 0.09 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 9 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 10 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 11 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 12 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 13 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 14 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 15 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 16 6357057 63352147 1 4 33 3 0 0 1 0 0.11 0 10 0 0 10 6 7 12 6 7 85.86 99.34 0.53 0 2 1 Whitelist READ-US 0.54 0.01 0 0 0.48 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 8 0.12 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 17 11654566 12090752 1 1 33 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA 4 3 3 85.86 68.76 26.8 0 0 2 Whitelist READ-US 0.62 0.81 NA NA 0.59 0 No READ-US 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TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 20 14622785 15110891 1 1 33 1 0 0 0 0 0.39 0.51 3 NA NA NA NA NA 6 3 3 85.86 92.71 0.29 0 2 1 Whitelist READ-US 0.62 0.75 NA NA 0.59 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 21 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 22 NA NA 0 0 33 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e5e4aa9f-6015-4d62-a088-69920d7f2500 X 150414044 151655387 1 1 33 0 0 0 1 0 0.39 0.08 3 0 0 NA NA NA 9 3 4 85.86 99.76 0.01 0 7 2 Whitelist READ-US 0.62 0.23 0 0 0.59 0 No READ-US e5e4aa9f-6015-4d62-a088-69920d7f2500 READ 0.76 3.44 ColoRect-AdenoCA NA 2 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:2 3 READ-US DO36619 TCGA-AG-3885 e5e4aa9f-6015-4d62-a088-69920d7f2500 female alive C20 71 NA 0 NA Included ColoRect-AdenoCA READ US 0 0 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 1 5285168 231792022 1 8 51 2 1 2 2 1 0.93 0 7 0 0 7 6 7 8 7 7 24.25 28.87 71.13 0 1 2 Whitelist READ-US 1 0.01 0 0 0.95 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 15 0.15 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 2 33820884 206397412 1 3 51 2 1 0 0 0 0.3 0.62 4 0 0 4 4 4 5 5 5 24.25 8.49 91.41 0 1 2 Whitelist READ-US 0.62 0.83 0 0 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 6 0.06 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 3 175325232 175555270 2 2 51 2 0 0 0 0 0.11 0.17 2 0 0 NA NA NA 6 3 3 24.25 8.06 91.8 0 1 2 Whitelist READ-US 0.54 0.38 0 0 0.48 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 4 0.04 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 4 178317798 178349333 1 1 51 0 1 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 24.25 0 99.8 1 2 NA Whitelist READ-US 0.62 0.5 NA NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 5 49893182 62017126 1 1 51 1 0 0 0 0 0.39 0.56 1 0 NA NA NA NA NA NA NA 24.25 0 99.86 0 2 NA Whitelist READ-US 0.62 0.79 0 NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 6 48486865 49126569 1 1 51 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 24.25 0.37 99.48 0 1 2 Whitelist READ-US 0.62 0.62 NA NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 7 3160701 117410395 1 3 51 1 2 0 0 0 0.3 0.35 4 0 0 4 4 4 6 6 6 24.25 19.7 80.07 0 2 3 Whitelist READ-US 0.62 0.61 0 0 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 6 0.06 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 8 112943432 133751175 1 3 51 0 1 0 1 1 0.57 0.33 3 0 0 NA NA NA 5 4 4 24.25 46.96 52.92 0 3 2 Whitelist READ-US 0.87 0.58 0 0 0.64 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 5 0.05 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 9 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 10 NA NA 0 0 51 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.75 0 NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 11 2128283 127037151 1 2 51 1 1 0 0 0 0.57 0.51 4 0.01 0 4 3 4 5 3 3 24.25 15.81 83.76 0 2 1 Whitelist READ-US 0.68 0.76 0.01 0 0.64 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 4 0.04 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 13 73644041 73690182 1 1 51 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA NA NA NA 24.25 100 0 0 3 4 Whitelist READ-US 0.62 0.89 NA NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 14 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 15 42543293 60306874 1 1 51 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.25 17.33 82.67 0 1 2 Whitelist READ-US 0.62 1 NA NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 16 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 1 NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 17 NA NA 0 0 51 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.65 NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 18 NA NA 0 0 51 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.64 NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 19 1514753 1534700 1 1 51 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 24.25 0.03 99.79 0 2 4 Whitelist READ-US 0.62 1 NA NA 0.59 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 2 0.02 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 20 12335658 37024176 1 3 51 3 0 0 0 0 0.03 0.1 5 0 0 5 4 5 7 4 4 24.25 73.92 18.36 0 2 3 Whitelist READ-US 0.41 0.26 0 0 0.33 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 6 0.06 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 21 NA NA 0 0 51 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA 0.71 NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 READ-US::e6827400-0d95-46b0-8874-6ce9e9d5011b X NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist READ-US NA NA NA NA NA 0 No READ-US e6827400-0d95-46b0-8874-6ce9e9d5011b READ 0.88 1.91 ColoRect-AdenoCA NA 0 0 NA 2 READ-US DO37138 TCGA-AG-3727 e6827400-0d95-46b0-8874-6ce9e9d5011b female alive C19 78 NA 30 NA Included ColoRect-AdenoCA READ US 0 0.99 RECA-EU::C0001 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 3 NA NA 0 0 10 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 5 NA NA 0 0 10 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.32 NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 6 162965918 163280987 1 1 10 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 11.26 0 99.85 0 2 NA Whitelist RECA-EU 0.62 0.3 NA NA 0.59 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 2 0.1 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 8 NA NA 0 0 10 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.65 NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 10 104196060 104219241 1 1 10 0 0 1 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 11.26 23.02 76.78 0 1 NA Whitelist RECA-EU 0.62 0.63 NA NA 0.59 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 2 0.1 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 15 NA NA 0 0 10 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 16 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.47 NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 21 32447927 37047850 1 2 10 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 11.26 77.35 0 0 1 NA Whitelist RECA-EU 0.68 0.03 NA 0 0.64 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 4 0.2 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0001 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0001 RECA 0.69 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46827 C0001 male deceased C64 67 782 782 NA Included Kidney-RCC RECA EU 1 25.72 RECA-EU::C0004 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 3 NA NA 0 0 9 0 0 0 0 0 NA 0.48 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.72 NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 4 176029249 180379380 1 3 9 0 0 1 0 2 0.39 0 3 0 0 NA NA NA 6 6 6 15.11 6.15 93.66 0 1 2 Whitelist RECA-EU 0.62 0 0 0 0.59 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 4 0.22 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 5 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.07 NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 7 NA NA 0 0 9 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.23 NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 10 NA NA 0 0 9 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.03 NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0004 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0004 RECA 0.46 1.87 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46830 C0004 female alive C64 77 2044 2044 NA Included Kidney-RCC RECA EU 1 67.24 RECA-EU::C0005 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 2 135229956 135249020 1 1 17 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 22.47 0 99.91 0 2 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 3 62575892 70085335 1 5 17 1 0 1 1 2 0.8 0 7 0 0 7 7 7 8 8 8 22.47 32.78 67.17 0 2 1 Whitelist RECA-EU 5 0.68 0.01 0 0 0.84 1 Linked to high confidence RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC Canonical without polyploidization 8 0.24 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 5 120889469 128593853 5 7 17 0 1 2 2 2 0.53 0 7 0 0 7 7 7 8 8 8 22.47 31.83 68.04 0 3 2 Whitelist RECA-EU 3 0.62 0 0 0 0.64 1 High confidence RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC Canonical without polyploidization 12 0.35 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 6 43652705 43759132 1 1 17 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.47 99.76 0.06 0 1 2 Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 7 92208288 103735672 1 1 17 0 1 0 0 0 0.39 0.61 2 NA NA NA NA NA NA NA NA 22.47 7.24 92.53 0 2 3 Whitelist RECA-EU 0.62 0.82 NA NA 0.59 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 11 NA NA 0 0 17 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.78 NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 16 80632999 80802291 1 1 17 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 22.47 0.19 99.7 0 1 2 Whitelist RECA-EU 0.62 0.62 NA NA 0.59 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 20 3519763 3625190 1 1 17 1 0 0 0 0 0.39 0.31 1 NA NA NA NA NA NA NA NA 22.47 0 99.02 0 2 NA Whitelist RECA-EU 0.62 0.56 NA NA 0.59 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0005 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0005 RECA 0.33 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46832 C0005 male deceased C64 55 2 2 NA Included Kidney-RCC RECA EU 1 0.07 RECA-EU::C0006 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 7 NA NA 0 0 7 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.16 NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 10 NA NA 0 0 7 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.52 NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 14 NA NA 0 0 7 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.08 NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 22 20927253 37960759 1 2 7 1 0 0 0 1 0.39 0 1 NA NA NA NA NA NA NA NA 0.4 23.78 65.11 0 2 NA Whitelist RECA-EU 0.68 0 NA NA 0.59 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 3 0.21 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0006 X NA NA 0 0 7 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0 NA NA NA 0 No RECA-EU C0006 RECA 0.64 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46834 C0006 female deceased C64 52 978 978 NA Included Kidney-RCC RECA EU 1 32.17 RECA-EU::C0007 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 5 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.31 NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 11 47302308 47315154 1 1 2 0 1 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 24.62 0 99.57 0 2 NA Whitelist RECA-EU 0.62 0.25 NA NA 0.59 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 2 0.5 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0007 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0007 RECA 0.52 1.97 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46836 C0007 male deceased C64 79 1804 1804 NA Included Kidney-RCC RECA EU 1 59.34 RECA-EU::C0009 1 2805978 16194826 1 2 18 1 1 0 0 0 0.57 0.01 4 0.55 0 4 3 4 5 3 3 19.21 4.55 95.45 0 2 1 Whitelist RECA-EU 0.68 0.05 0.55 0 0.64 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 4 0.11 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 2 219558464 222664053 1 2 18 0 0 1 0 1 0.39 0.01 3 0 NA NA NA NA 7 7 7 19.21 0.18 99.71 0 2 3 Whitelist RECA-EU 0.68 0.06 0 NA 0.59 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 3 0.08 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 3 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 4 171741938 171759487 1 1 18 1 0 0 0 0 0.39 0.34 1 NA NA NA NA NA NA NA NA 19.21 0.66 99.33 0 2 NA Whitelist RECA-EU 0.62 0.59 NA NA 0.59 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 5 1299887 86961552 1 6 18 1 1 0 0 4 0.57 0 6 0 0 6 5 6 10 8 8 19.21 51.8 48.06 2 2 3 Whitelist RECA-EU 0.93 0 0 0 0.64 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 8 0.22 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 8 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 9 NA NA 0 0 18 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.75 NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 10 95206108 95247662 1 1 18 0 1 0 0 0 0.39 0.57 2 NA NA NA NA NA NA NA NA 19.21 0.03 99.79 0 2 3 Whitelist RECA-EU 0.62 0.8 NA NA 0.59 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 14 23161096 23353682 1 1 18 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 19.21 98.91 0.18 0 1 2 Whitelist RECA-EU 0.62 0.69 NA NA 0.59 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 17 36151459 36241088 2 2 18 0 2 0 0 0 0.11 0.08 4 NA 0 4 0 3 4 0 3 19.21 0.08 99.91 0 2 3 Whitelist RECA-EU 0.54 0.24 NA 0 0.48 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 4 0.11 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0009 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0009 RECA 0.41 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46838 C0009 male alive C64 61 2189 2189 NA Included Kidney-RCC RECA EU 1 72.01 RECA-EU::C0011 1 16121449 51696590 1 1 12 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 16.3 14.27 85.73 0 1 2 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 2 0.08 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 2 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 3 70478421 72085703 2 4 12 0 1 1 0 2 0.57 0.01 3 0 0 NA NA NA 4 4 4 16.3 36.19 63.65 1 2 1 Whitelist RECA-EU 0.68 0.04 0 0 0.64 0 High confidence RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC Canonical without polyploidization 6 0.25 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 False negative; manually included RECA-EU::C0011 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 6 0 171115067 0 0 12 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.02 NA NA NA 0 High confidence RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 False negative; manually included RECA-EU::C0011 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 8 73308144 75263863 2 2 12 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 6 6 6 16.3 39.29 60.7 0 2 NA Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC Canonical without polyploidization 4 0.17 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 False negative; manually included RECA-EU::C0011 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 16 9271328 9334033 1 1 12 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 16.3 0 99.9 0 2 NA Whitelist RECA-EU 0.62 0.52 NA NA 0.59 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 2 0.08 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0011 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0011 RECA 0.56 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46844 C0011 female alive C64 65 2097 2097 NA Included Kidney-RCC RECA EU 1 68.98 RECA-EU::C0012 1 33458786 33564128 1 1 49 0 1 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 90.64 100 0 0 4 NA Whitelist RECA-EU 0.62 0.4 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 2 57454255 228735680 1 2 49 0 2 0 0 0 0.11 0.44 4 NA 0 4 4 4 5 5 5 90.64 99.91 0 0 5 6 Whitelist RECA-EU 0.54 0.68 NA 0 0.48 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 4 0.04 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 3 NA NA 0 0 49 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.5 NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 4 181754982 181786247 1 1 49 1 0 0 0 0 0.39 0.26 2 NA NA NA NA NA NA NA NA 90.64 99.96 0 0 3 4 Whitelist RECA-EU 0.62 0.5 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 5 93175170 171663700 1 4 49 1 0 1 0 2 0.57 0.13 6 0 0 6 5 6 8 6 6 90.64 99.87 0 0 4 6 Whitelist RECA-EU 1 0.32 0 0 0.64 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 6 0.06 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 6 NA NA 0 0 49 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 7 78264823 78287364 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.64 99.78 0 0 5 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 8 80632654 143570233 1 2 49 1 1 0 0 0 0.57 1 4 NA 0 4 3 4 5 3 3 90.64 96.58 0 5 5 4 Whitelist RECA-EU 0.68 1 NA 0 0.64 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 4 0.04 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 9 25528545 25547435 1 1 49 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 90.64 99.31 0.01 0 2 3 Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 10 4199382 60236974 17 17 49 6 3 4 4 0 0.77 0 34 0 0 34 19 31 35 19 19 90.64 96.3 0 20 5 4 Whitelist RECA-EU 0.87 0 0 0 0.84 1 High confidence RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC With other complex events 34 0.35 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 11 85448158 97176789 1 4 49 0 0 1 0 3 0.39 0.29 3 NA 0 NA NA NA 4 4 4 90.64 69.07 30.51 0 2 4 Whitelist RECA-EU 0.62 0.53 NA 0 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 5 0.05 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 12 38929186 61631205 1 2 49 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 90.64 95.71 0 0 4 5 Whitelist RECA-EU 0.54 1 NA 0 0.48 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 4 0.04 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 13 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 14 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 15 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 16 6981768 7286441 1 1 49 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 90.64 99.89 0 0 4 5 Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 17 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 18 64598189 66602470 1 1 49 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 90.64 99.99 0 0 4 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 2 0.02 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 19 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 20 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 21 NA NA 0 0 49 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.7 NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 22 NA NA 0 0 49 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 0 0 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0012 X 93353801 153655302 1 3 49 2 1 0 0 0 0.3 0.1 6 0 0 6 4 4 7 5 5 90.64 99.79 0 0 4 5 Whitelist RECA-EU 0.62 0.27 0 0 0.59 1 No RECA-EU C0012 RECA 0.4 4.08 Kidney-RCC NA 6 0.06 NA 5 RECA-EU DO46847 C0012 female alive C64 57 2062 2062 NA Included Kidney-RCC RECA EU 1 67.83 RECA-EU::C0013 1 NA NA 0 0 3 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.45 NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.42 NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 5 NA NA 0 0 3 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA 10 3 5 0 0 0 0 0 0 Whitelist RECA-EU NA 0.39 NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 5 7 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 10 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.32 NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0013 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0013 RECA 0.5 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46850 C0013 male deceased C64 65 114 114 NA Included Kidney-RCC RECA EU 1 3.75 RECA-EU::C0014 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 3 78323577 84515937 14 14 17 2 4 4 4 0 0.84 0 8 0 0 8 8 8 10 10 10 2.57 40.68 59.18 0 1 2 Whitelist RECA-EU 0.9 0 0 0 0.88 1 High confidence RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC Canonical without polyploidization 28 0.82 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 5 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 8 NA NA 0 0 17 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.81 NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 9 NA NA 0 0 17 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.74 NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 12 NA NA 0 0 17 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.78 NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0014 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0014 RECA 0.61 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46853 C0014 female alive C64 62 2112 2112 NA Included Kidney-RCC RECA EU 1 69.47 RECA-EU::C0015 1 189970116 190028247 1 1 2 1 0 0 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 38.78 0 100 0 2 NA Whitelist RECA-EU 0.62 0.35 NA NA 0.59 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 2 0.5 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 12 28909830 28950284 1 1 2 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 38.78 99.89 0.03 0 2 3 Whitelist RECA-EU 0.62 0.25 NA NA 0.59 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 2 0.5 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0015 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0015 RECA 0.46 2.61 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46856 C0015 male alive C64 73 2042 2042 NA Included Kidney-RCC RECA EU 1 67.17 RECA-EU::C0016 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 2 0 243199373 0 0 7 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.07 NA NA NA 0 High confidence RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC Canonical without polyploidization 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 False negative; manually included RECA-EU::C0016 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.64 NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 5 106978404 112157356 2 4 7 0 2 0 0 2 0.11 0 6 0 0 6 6 6 8 8 8 15.04 40.07 59.79 0 2 3 Whitelist RECA-EU 0.68 0 0 0 0.48 0 High confidence RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC Canonical without polyploidization 6 0.43 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 False negative; manually included RECA-EU::C0016 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 19 1154621 1234532 1 1 7 0 1 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 15.04 0 99.83 0 2 NA Whitelist RECA-EU 0.62 0.32 NA NA 0.59 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 2 0.14 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0016 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0016 RECA 0.57 1.89 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7577559_T_G,CN:2 2 RECA-EU DO46859 C0016 female deceased C64 59 1586 1586 NA Included Kidney-RCC RECA EU 1 52.17 RECA-EU::C0019 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 5 94079866 102832962 2 2 2 2 0 0 0 0 0.11 0 6 NA 0 6 6 6 6 6 6 10.29 44.23 55.63 0 2 3 Whitelist RECA-EU 0.54 0.02 NA 0 0.48 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 4 1 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0019 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0019 RECA 0.57 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46869 C0019 female alive C64 61 229 229 NA Included Kidney-RCC RECA EU 1 7.53 RECA-EU::C0020 1 34396123 117921657 1 4 32 1 1 1 0 1 0.8 0.31 3 0 0 NA NA NA NA NA NA 8.23 1.64 98.36 0 2 1 Whitelist RECA-EU 0.68 0.56 0 0 0.84 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 7 0.11 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 2 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 3 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 4 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 5 1757316 2055472 2 2 32 0 1 0 1 0 0.57 0 3 0 0 NA NA NA 5 5 5 8.23 0.15 99.72 0 2 1 Whitelist RECA-EU 0.68 0 0 0 0.64 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 4 0.06 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 6 126454438 126908980 1 1 32 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 8.23 0.27 99.59 0 1 2 Whitelist RECA-EU 0.62 0.9 NA NA 0.59 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 7 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 8 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 9 130216384 130739182 6 9 32 1 3 1 1 3 0.57 0 8 0 0 8 8 8 9 9 9 8.23 0.21 99.09 0 1 2 Whitelist RECA-EU 0.97 0 0 0 0.64 1 High confidence RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC Canonical without polyploidization 15 0.23 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 10 NA NA 0 0 32 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 11 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 12 96571907 96674605 2 2 32 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA NA NA NA 8.23 0 99.92 1 2 NA Whitelist RECA-EU 0.68 0.19 0 0 0.64 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 4 0.06 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 14 NA NA 0 0 32 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.51 NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 15 81542751 92542093 1 1 32 0 0 1 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 8.23 9.61 90.26 0 1 2 Whitelist RECA-EU 0.62 0.45 NA NA 0.59 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 16 NA NA 0 0 32 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.8 NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 17 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 18 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 19 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0020 X NA NA 0 0 32 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.88 NA NA NA 1 No RECA-EU C0020 RECA 0.65 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46873 C0020 male deceased C64 69 1539 1539 NA Included Kidney-RCC RECA EU 1 50.62 RECA-EU::C0021 1 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 3 54440509 59348361 5 9 16 1 0 2 2 4 0.53 0 15 0 0 15 15 15 16 16 16 22.21 27.9 72.05 0 2 1 Whitelist RECA-EU 5 0.85 0 0 0 0.64 1 High confidence RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC Canonical without polyploidization 14 0.44 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 4 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 5 75100143 77822721 1 5 16 0 1 0 1 3 0.57 0 6 0 0 6 6 6 8 8 8 22.21 56.85 43.01 0 2 3 Whitelist RECA-EU 3 0.68 0 0 0 0.64 1 Linked to high confidence RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC Canonical without polyploidization 7 0.22 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 6 4335356 4347802 1 1 16 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 22.21 0.01 99.84 0 0 2 Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 7 NA NA 0 0 16 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.81 NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 14 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 17 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 18 32737747 32762343 1 1 16 0 1 0 0 0 0.39 0.35 1 NA NA NA NA NA NA NA NA 22.21 0.13 99.83 0 2 NA Whitelist RECA-EU 0.62 0.61 NA NA 0.59 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0021 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0021 RECA 0.61 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46877 C0021 male alive C64 61 1576 1576 NA Included Kidney-RCC RECA EU 1 51.84 RECA-EU::C0022 1 NA NA 0 0 7 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.26 NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 5 NA NA 0 0 7 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA 0.04 0 NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 8 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 9 NA NA 0 0 7 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist RECA-EU NA 0.48 NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 12 NA NA 0 0 7 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.14 NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 18 NA NA 0 0 7 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.39 NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0022 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0022 RECA 0.21 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47249 C0022 female deceased C64 75 762 762 NA Included Kidney-RCC RECA EU 1 25.07 RECA-EU::C0023 1 100155824 178948972 1 1 20 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 91.38 99.67 0 0 3 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 2 0.05 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 2 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 3 NA NA 0 0 20 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 5 88477336 97570768 9 10 20 1 4 2 2 1 0.55 0 14 0 0 14 3 4 17 3 4 91.38 99.89 0 0 7 6 Whitelist RECA-EU 0.62 0 0 0 0.64 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 19 0.48 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 12 92847003 93113630 1 1 20 0 1 0 0 0 0.39 0.62 2 NA NA NA NA NA 4 3 3 91.38 99.92 0 0 4 5 Whitelist RECA-EU 0.62 0.83 NA NA 0.59 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 2 0.05 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 13 47734501 48505169 1 1 20 0 0 1 0 0 0.39 0.15 1 NA NA NA NA NA NA NA NA 91.38 100 0 0 3 NA Whitelist RECA-EU 0.62 0.35 NA NA 0.59 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 2 0.05 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 14 NA NA 0 0 20 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.72 NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 19 8205451 8241740 1 1 20 0 1 0 0 0 0.39 0.33 1 NA NA NA NA NA 4 3 3 91.38 78.87 13.45 0 3 NA Whitelist RECA-EU 0.62 0.58 NA NA 0.59 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 2 0.05 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0023 X 15541813 142538335 1 4 20 4 0 0 0 0 0.01 0.02 6 0 0 6 6 6 7 7 7 91.38 99.77 0 0 3 4 Whitelist RECA-EU 0.21 0.07 0 0 0.16 0 No RECA-EU C0023 RECA 0.5 3.47 Kidney-RCC NA 8 0.2 NA 4 RECA-EU DO46881 C0023 female alive C64 77 1927 1927 NA Included Kidney-RCC RECA EU 1 63.39 RECA-EU::C0024 1 183345211 189033620 1 2 8 1 0 1 0 0 0.57 0 5 0 0 5 3 5 9 5 5 4.11 24.66 75.34 0 2 3 Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0024 RECA 0.24 2 Kidney-RCC Canonical without polyploidization 4 0.25 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 False negative; manually included RECA-EU::C0024 2 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 3 59857026 61939059 1 3 8 1 0 0 0 2 0.39 0 2 NA 0 NA NA NA 4 4 4 4.11 29.86 70.09 0 1 2 Whitelist RECA-EU 0.62 0.01 NA 0 0.59 0 High confidence RECA-EU C0024 RECA 0.24 2 Kidney-RCC Canonical without polyploidization 4 0.25 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 False negative; manually included RECA-EU::C0024 4 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 5 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 6 105978156 108512686 1 1 8 0 0 0 1 0 0.39 0.39 1 NA NA NA NA NA NA NA NA 4.11 0 99.78 0 2 NA Whitelist RECA-EU 0.62 0.64 NA NA 0.59 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 2 0.12 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 7 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 8 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 9 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 10 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 11 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 12 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 13 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 14 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 15 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 16 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 17 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 18 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 19 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 20 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 21 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 22 NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0024 X NA NA 0 0 8 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0024 RECA 0.24 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47048 C0024 female alive C64 59 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0025 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 2 212931855 229153467 4 5 9 2 0 1 1 1 0.57 0 5 0 0 5 5 5 6 6 6 19.86 11.62 88.27 0 1 2 Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0025 RECA 0.53 2 Kidney-RCC Canonical without polyploidization 9 0.5 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 False negative; manually included RECA-EU::C0025 3 104912797 106240666 1 2 9 0 0 0 1 1 0.39 0.13 3 NA NA NA NA NA 4 4 4 19.86 53.54 46.41 0 2 1 Whitelist RECA-EU 0.68 0.32 NA NA 0.59 0 High confidence RECA-EU C0025 RECA 0.53 2 Kidney-RCC Canonical without polyploidization 3 0.17 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 False negative; manually included RECA-EU::C0025 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 5 39080482 45025997 2 2 9 1 1 0 0 0 0.57 0.11 3 NA 0 NA NA NA NA NA NA 19.86 96.58 3.29 0 3 2 Whitelist RECA-EU 0.68 0.28 NA 0 0.64 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 4 0.22 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0025 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0025 RECA 0.53 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46885 C0025 male deceased C64 45 656 656 NA Included Kidney-RCC RECA EU 1 21.58 RECA-EU::C0026 1 NA NA 0 0 3 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.45 NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 3 NA NA 0 0 3 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.42 NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 11 NA NA 0 0 3 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.33 NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 13 NA NA 0 0 3 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.27 NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 14 NA NA 0 0 3 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.25 NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0026 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0026 RECA 0.37 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47052 C0026 female alive C64 66 1686 1686 NA Included Kidney-RCC RECA EU 1 55.46 RECA-EU::C0027 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 3 85430417 85571969 1 1 4 1 0 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 13.52 44.34 52.49 0 1 NA Whitelist RECA-EU 0.62 0.1 NA NA 0.59 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 4 62608465 62720901 1 1 4 1 0 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 13.52 0.06 99.91 0 1 2 Whitelist RECA-EU 0.62 0.48 NA NA 0.59 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.41 NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 13 NA NA 0 0 4 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.32 NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0027 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0027 RECA 0.55 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46889 C0027 male deceased C64 60 997 997 NA Included Kidney-RCC RECA EU 1 32.8 RECA-EU::C0028 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 3 53741890 60601043 1 9 22 1 0 2 1 5 0.57 0 6 0 0 6 6 6 8 8 8 33.8 28.94 71.03 0 1 2 Whitelist RECA-EU 5 0.62 0 0 0 0.64 1 Linked to high confidence RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC Canonical without polyploidization 13 0.3 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 5 108336748 122172505 7 13 22 2 0 3 2 6 0.44 0 14 0 0 14 14 14 16 16 16 33.8 99.89 0 0 3 4 Whitelist RECA-EU 3 0.68 0 0 0 0.64 1 High confidence RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC After polyploidization 20 0.45 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 7 13230129 13261487 1 1 22 0 0 0 1 0 0.39 0.33 2 NA NA NA NA NA NA NA NA 33.8 99.75 0.02 0 2 3 Whitelist RECA-EU 0.62 0.58 NA NA 0.59 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 2 0.05 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 14 72629633 87113256 1 1 22 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 33.8 0 99.09 0 2 NA Whitelist RECA-EU 0.62 0.75 NA NA 0.59 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 2 0.05 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0028 X 153539267 154041455 1 1 22 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 33.8 100 0 0 1 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 1 No RECA-EU C0028 RECA 0.65 2.21 Kidney-RCC NA 2 0.05 NA 2 RECA-EU DO47056 C0028 male alive C64 54 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0029 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 3 0 198022430 0 0 12 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0.01 NA NA NA 0 High confidence RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC Canonical without polyploidization 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 False negative; manually included RECA-EU::C0029 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 5 174130148 174140848 2 2 12 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 8 6 6 11.25 38.95 60.92 0 3 4 Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC Canonical without polyploidization 4 0.17 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 False negative; manually included RECA-EU::C0029 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 10 108910110 109259580 1 1 12 0 1 0 0 0 0.39 0.43 2 NA NA NA NA NA NA NA NA 11.25 0.26 99.63 0 2 3 Whitelist RECA-EU 0.62 0.68 NA NA 0.59 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 2 0.08 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 14 30820135 79931210 1 1 12 1 0 0 0 0 0.39 0.32 2 NA NA NA NA NA NA NA NA 11.25 45.75 53.33 0 1 2 Whitelist RECA-EU 0.62 0.57 NA NA 0.59 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 2 0.08 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0029 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0029 RECA 0.51 1.93 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7578534_A_C,CN:2 2 RECA-EU DO46893 C0029 female deceased C64 62 146 146 NA Included Kidney-RCC RECA EU 1 4.8 RECA-EU::C0030 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 22 30163946 30343234 1 1 1 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 13.22 0.35 99.65 0 2 3 Whitelist RECA-EU 0.62 0.05 NA NA 0.59 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 2 1 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0030 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0030 RECA 0.72 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47060 C0030 male alive C64 68 1942 1942 NA Included Kidney-RCC RECA EU 1 63.88 RECA-EU::C0031 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 4 75725849 77214510 1 1 4 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 5.84 0 99.98 0 2 NA Whitelist RECA-EU 0.62 0.09 NA NA 0.59 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 5 75846142 85349863 1 1 4 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 5.84 52.7 47.16 0 2 3 Whitelist RECA-EU 0.62 0.09 NA NA 0.59 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0031 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0031 RECA 0.49 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46897 C0031 female alive C64 48 3 3 NA Included Kidney-RCC RECA EU 1 0.1 RECA-EU::C0033 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 9 68513988 69002903 1 1 2 0 0 1 0 0 0.39 0.08 1 NA NA NA NA NA NA NA NA 6.79 0 99.86 0 2 NA Whitelist RECA-EU 0.62 0.22 NA NA 0.59 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 2 0.5 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 20 39847369 39955939 1 1 2 1 0 0 0 0 0.39 0.04 1 NA NA NA NA NA NA NA NA 6.79 0 98.9 0 2 NA Whitelist RECA-EU 0.62 0.15 NA NA 0.59 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 2 0.5 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0033 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0033 RECA 0.32 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46901 C0033 female deceased C64 68 1369 1369 NA Included Kidney-RCC RECA EU 1 45.03 RECA-EU::C0034 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 3 14880337 18452738 1 4 6 0 0 1 1 2 0.57 0 5 0 0 5 5 5 6 6 6 5.17 7.81 92.14 0 2 1 Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC Canonical without polyploidization 6 0.5 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 False negative; manually included RECA-EU::C0034 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0034 X 140457612 147105943 1 2 6 0 1 0 0 1 0.39 0 3 NA NA NA NA NA 4 4 4 5.17 94.49 5.29 0 1 2 Whitelist RECA-EU 0.68 0.01 NA NA 0.59 0 No RECA-EU C0034 RECA 0.5 1.95 Kidney-RCC NA 3 0.25 NA 2 RECA-EU DO47064 C0034 female alive C64 49 1432 1432 NA Included Kidney-RCC RECA EU 1 47.11 RECA-EU::C0035 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 2 201955923 202028773 1 1 15 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 18.81 0 99.9 0 2 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 3 0 198022430 0 0 15 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0.24 NA NA NA 0 High confidence RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 False negative; manually included RECA-EU::C0035 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 5 96547077 96822217 2 4 15 0 1 1 0 2 0.57 0 1 0 0 NA NA NA 4 3 3 18.81 45.32 54.55 2 2 NA Whitelist RECA-EU 0.68 0 0 0 0.64 0 High confidence RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC Canonical without polyploidization 6 0.2 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 False negative; manually included RECA-EU::C0035 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 8 144806852 145685946 1 1 15 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 18.81 0.6 98.93 0 3 NA Whitelist RECA-EU 0.62 0.77 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 9 21496505 22071240 1 1 15 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 18.81 99.86 0 0 0 1 Whitelist RECA-EU 0.62 0.7 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 10 NA NA 0 0 15 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.75 NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 15 33627246 44115342 1 1 15 1 0 0 0 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 18.81 10.23 89.77 0 1 2 Whitelist RECA-EU 0.62 0.59 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 17 NA NA 0 0 15 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.59 NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 20 42723190 60962110 1 1 15 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 18.81 28.94 70.08 0 2 3 Whitelist RECA-EU 0.62 0.52 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 22 42756575 42767995 1 1 15 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 18.81 0 100 0 2 NA Whitelist RECA-EU 0.62 0.06 NA NA 0.59 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 2 0.07 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0035 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0035 RECA 0.66 1.85 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46905 C0035 male alive C64 56 232 232 NA Included Kidney-RCC RECA EU 1 7.63 RECA-EU::C0036 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 3 47567959 53358528 2 4 6 0 0 1 1 2 0.57 0 4 0 0 4 4 4 4 4 4 9.55 25.36 74.61 0 1 2 Whitelist RECA-EU 0.62 0 0 0 0.64 0 High confidence RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC Canonical without polyploidization 6 0.5 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 False negative; manually included RECA-EU::C0036 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 5 87346269 87788062 1 1 6 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 6 6 9.55 52.06 47.82 0 2 3 Whitelist RECA-EU 0.62 0.02 NA NA 0.59 0 High confidence RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC Canonical without polyploidization 2 0.17 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 False negative; manually included RECA-EU::C0036 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0036 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0036 RECA 0.43 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47068 C0036 male deceased C64 48 1685 1685 NA Included Kidney-RCC RECA EU 1 55.43 RECA-EU::C0037 1 100866004 100925713 1 1 23 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.97 0 100 0 2 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 2 0.04 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 2 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 3 60255735 61409492 1 2 23 1 0 0 0 1 0.39 0 1 0 NA NA NA NA 4 4 4 8.97 29.13 70.73 0 2 NA Whitelist RECA-EU 0.68 0.02 0 NA 0.59 0 High confidence RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC Canonical without polyploidization 3 0.07 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 False negative; manually included RECA-EU::C0037 4 183102744 183113109 1 1 23 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 8.97 0.22 99.77 0 2 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 2 0.04 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 5 103471093 107942441 1 3 23 0 0 1 0 2 0.39 0 2 0 0 NA NA NA 8 8 8 8.97 39.73 60.13 0 2 3 Whitelist RECA-EU 0.62 0 0 0 0.59 0 High confidence RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC Canonical without polyploidization 4 0.09 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 False negative; manually included RECA-EU::C0037 6 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 7 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 8 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 9 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 10 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 11 NA NA 0 0 23 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 12 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 13 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 14 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 15 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 16 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 17 NA NA 0 0 23 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.71 NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 18 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 19 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 20 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 21 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 22 NA NA 0 0 23 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 RECA-EU::C0037 X 107914153 147118597 3 3 23 0 1 1 1 0 0.8 0 3 0 0 NA NA NA 6 6 6 8.97 97.55 1.88 0 1 2 Whitelist RECA-EU 0.87 0 0 0 0.84 0 High confidence RECA-EU C0037 RECA 0.46 1.94 Kidney-RCC Canonical without polyploidization 6 0.13 NA 2 RECA-EU DO46909 C0037 male alive C64 78 981 981 NA Included Kidney-RCC RECA EU 1 32.27 False negative; manually included RECA-EU::C0038 1 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 2 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 3 81926955 83857192 1 1 77 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 27.86 42.32 57.65 0 1 2 Whitelist RECA-EU 0.62 0.39 NA NA 0.59 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 2 0.01 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 4 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 5 1324772 162595018 1 10 77 2 0 0 1 7 0.3 0 9 0 0 9 6 9 18 14 14 27.86 99.72 0.14 0 3 4 Whitelist RECA-EU 11 0.68 0 0 0 0.59 1 Linked to high confidence RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC After polyploidization 13 0.08 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 6 NA NA 0 0 77 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.25 NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 7 109901471 110409855 1 2 77 2 0 0 0 0 0.11 0.61 2 0 0 NA NA NA NA NA NA 27.86 99.45 0.32 0 2 3 Whitelist RECA-EU 0.54 0.82 0 0 0.48 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 4 0.03 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 8 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 9 21953890 22183007 1 1 77 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 5 3 3 27.86 0.43 98.86 0 0 1 Whitelist RECA-EU 0.62 0.63 NA NA 0.59 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 2 0.01 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 10 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 11 70294810 133163692 39 57 77 9 11 10 9 18 0.96 0 41 0 0 41 30 32 42 30 30 27.86 9.11 90.46 0 1 2 Whitelist RECA-EU 5 0.89 0 0 0 0.98 1 High confidence RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC Canonical without polyploidization 96 0.62 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 12 16175932 89877176 1 2 77 2 0 0 0 0 0.11 0.59 3 NA 0 NA NA NA NA NA NA 27.86 99.9 0.02 0 3 2 Whitelist RECA-EU 0.54 0.81 NA 0 0.48 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 4 0.03 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 13 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 14 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 15 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 16 6192561 6960096 1 2 77 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 6 4 5 27.86 99.71 0.2 0 1 2 Whitelist RECA-EU 0.54 1 NA 0 0.48 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 4 0.03 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 17 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 18 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 19 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 20 14686551 15851741 1 2 77 2 0 0 0 0 0.11 0.68 2 NA 0 NA NA NA NA NA NA 27.86 98.24 0.8 0 2 4 Whitelist RECA-EU 0.54 0.88 NA 0 0.48 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 4 0.03 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 21 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 22 NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0038 X NA NA 0 0 77 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0038 RECA 0.52 2.2 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47072 C0038 male deceased C64 64 789 789 NA Included Kidney-RCC RECA EU 1 25.95 RECA-EU::C0039 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 2 NA NA 0 0 10 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.81 NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 5 NA NA 0 0 10 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.32 NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 6 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 7 NA NA 0 0 10 0 0 0 0 0 NA 0.42 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.67 NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 8 88142158 88261332 1 1 10 1 0 0 0 0 0.39 0.41 2 NA NA NA NA NA 5 4 4 79.31 73.96 22.62 0 6 7 Whitelist RECA-EU 0.62 0.65 NA NA 0.59 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 2 0.1 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 10 37899336 38980652 1 1 10 1 0 0 0 0 0.39 0.38 2 NA NA NA NA NA 4 0 0 79.31 96.6 0 0 0 1 Whitelist RECA-EU 0.62 0.63 NA NA 0.59 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 2 0.1 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 11 NA NA 0 0 10 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.63 NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 16 5015180 5118179 1 1 10 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 3 5 79.31 99.89 0 0 4 6 Whitelist RECA-EU 0.62 0.1 NA NA 0.59 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 2 0.1 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 19 NA NA 0 0 10 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.01 NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0039 X 7163107 7177781 1 1 10 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 79.31 99.78 0 0 4 NA Whitelist RECA-EU 0.62 0.65 NA NA 0.59 0 No RECA-EU C0039 RECA 0.31 3.54 Kidney-RCC NA 2 0.1 NA 3 RECA-EU DO46913 C0039 female alive C64 54 1787 1787 NA Included Kidney-RCC RECA EU 1 58.78 RECA-EU::C0040 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.35 NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 3 NA NA 0 0 2 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.33 NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 6 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.02 NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0040 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0040 RECA 0.46 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47076 C0040 female alive C64 38 1866 1866 NA Included Kidney-RCC RECA EU 1 61.38 RECA-EU::C0041 1 49939355 72202580 1 2 14 2 0 0 0 0 0.11 0.3 4 NA 0 4 4 4 4 4 4 42.47 20.21 79.79 0 1 2 Whitelist RECA-EU 0.54 0.55 NA 0 0.48 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 4 0.14 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 2 204955914 240873531 1 1 14 0 0 1 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 42.47 0.87 99.03 0 1 2 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 2 0.07 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 3 67825140 108838958 1 4 14 1 1 0 1 1 0.8 0.01 8 0 0 8 4 5 9 4 5 42.47 96.86 0.09 1 3 1 Whitelist RECA-EU 0.68 0.06 0 0 0.84 0 High confidence RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC Canonical without polyploidization 7 0.25 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 False negative; manually included RECA-EU::C0041 4 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 5 130292956 137206551 1 1 14 0 0 1 0 0 0.39 0.22 2 NA NA NA NA NA 4 3 4 42.47 99.85 0 0 5 6 Whitelist RECA-EU 0.62 0.45 NA NA 0.59 0 High confidence RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC Canonical without polyploidization 2 0.07 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 False negative; manually included RECA-EU::C0041 6 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 7 NA NA 0 0 14 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist RECA-EU NA 0.77 NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 8 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 9 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 10 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 11 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 12 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 13 26484875 26581444 3 3 14 1 0 1 1 0 0.8 0.01 3 0 0 NA NA NA NA NA NA 42.47 99.99 0.01 0 3 2 Whitelist RECA-EU 0.87 0.05 0 0 0.84 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 6 0.21 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 14 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 15 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 16 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 17 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 18 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 19 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 20 14561068 14777571 1 1 14 1 0 0 0 0 0.39 0.26 1 NA NA NA NA NA NA NA NA 42.47 92.89 0 0 4 NA Whitelist RECA-EU 0.62 0.51 NA NA 0.59 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 2 0.07 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 21 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 22 NA NA 0 0 14 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 0 0 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0041 X 47791025 49013285 1 1 14 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 42.47 0.79 99.21 0 2 3 Whitelist RECA-EU 0.62 0.76 NA NA 0.59 0 No RECA-EU C0041 RECA 0.43 2.53 Kidney-RCC NA 2 0.07 NA 3 RECA-EU DO46917 C0041 male alive C64 58 2104 2104 NA Included Kidney-RCC RECA EU 1 69.21 RECA-EU::C0042 1 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 2 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 3 63359585 74750084 4 9 15 1 1 1 1 5 1 0 11 0 0 11 11 11 12 12 12 7.17 33.72 66.11 0 2 1 Whitelist RECA-EU 0.97 0 0 0 1 1 High confidence RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC Canonical without polyploidization 13 0.43 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 4 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 5 78789790 100675145 3 6 15 1 0 1 1 3 0.8 0 5 0 0 5 5 5 8 8 8 7.17 44.2 55.67 0 3 2 Whitelist RECA-EU 3 0.68 0 0 0 0.84 1 Linked to high confidence RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC Canonical without polyploidization 9 0.3 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 6 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 7 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 8 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 9 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 10 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 11 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 12 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 13 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 14 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 15 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 16 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 17 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 18 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 19 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 20 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 21 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 22 NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0042 X NA NA 0 0 15 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0042 RECA 0.44 2.03 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47080 C0042 female alive C64 50 1864 1864 NA Included Kidney-RCC RECA EU 1 61.32 RECA-EU::C0043 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 5 1247487 1582947 1 1 4 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 4 4 10.25 36.33 63.52 0 2 3 Whitelist RECA-EU 0.62 0.09 NA NA 0.59 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 7 142428981 142495144 1 1 4 1 0 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 10.25 0 99.77 0 2 NA Whitelist RECA-EU 0.62 0.42 NA NA 0.59 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 13 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist RECA-EU NA 0.03 NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0043 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0043 RECA 0.34 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47243 C0043 male alive C64 57 2260 2260 NA Included Kidney-RCC RECA EU 1 74.34 RECA-EU::C0046 1 44767482 51925995 1 2 11 1 1 0 0 0 0.57 0.21 2 NA 0 NA NA NA NA NA NA 18.52 0.02 99.98 3 2 3 Whitelist RECA-EU 0.68 0.44 NA 0 0.64 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 4 0.18 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 2 NA NA 0 0 11 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA 0.47 NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 3 37186550 37279020 1 1 11 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 8 8 8 18.52 43.19 53.54 0 1 2 Whitelist RECA-EU 0.62 0 0 NA 0.59 0 High confidence RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC Canonical without polyploidization 2 0.09 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 False negative; manually included RECA-EU::C0046 4 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 5 0 180915260 0 0 11 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0 NA NA NA 0 High confidence RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC Canonical without polyploidization 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 False negative; manually included RECA-EU::C0046 6 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 7 109840109 110035606 1 1 11 1 0 0 0 0 0.39 0.46 1 NA NA NA NA NA NA NA NA 18.52 0 99.77 0 2 NA Whitelist RECA-EU 0.62 0.7 NA NA 0.59 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 2 0.09 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 8 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 9 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 10 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 11 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 12 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 13 19341680 19361153 1 1 11 1 0 0 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 18.52 0 100 0 2 NA Whitelist RECA-EU 0.62 0.57 NA NA 0.59 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 2 0.09 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 14 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 15 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 16 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 17 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 18 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 19 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 20 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 21 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 22 NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0046 X NA NA 0 0 11 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0046 RECA 0.46 1.87 Kidney-RCC NA 0 0 nonsynonymous_SNV,17_7579707_A_T,CN:2 2 RECA-EU DO47088 C0046 male deceased C64 70 1246 1246 NA Included Kidney-RCC RECA EU 1 40.99 RECA-EU::C0047 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 3 126609450 129138779 1 1 2 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA 6 4 6 92.84 51.42 48.53 0 2 4 Whitelist RECA-EU 0.62 0.33 NA NA 0.59 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 2 0.5 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 18 64819121 68148580 1 1 2 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 92.84 95.72 4.26 0 2 3 Whitelist RECA-EU 0.62 0.17 NA NA 0.59 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 2 0.5 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0047 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0047 RECA 0.33 3.56 Kidney-RCC NA 0 0 NA 4 RECA-EU DO46925 C0047 female alive C64 66 2126 2126 NA Included Kidney-RCC RECA EU 1 69.93 RECA-EU::C0048 1 223892597 224592813 2 2 30 0 0 1 1 0 0.57 1 2 NA 0 NA NA NA NA NA NA 19.19 0.01 99.99 0 1 2 Whitelist RECA-EU 0.68 1 NA 0 0.64 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 4 0.07 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 2 158092242 161598269 4 10 30 0 2 2 0 6 0.26 0 7 0 0 7 7 7 8 8 8 19.19 65.75 34.16 0 2 3 Whitelist RECA-EU 0.86 0 0 0 0.59 1 High confidence RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC Canonical without polyploidization 14 0.23 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 3 NA NA 0 0 30 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0 0 NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 4 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 6 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 8 NA NA 0 0 30 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.87 NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 9 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 10 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 11 NA NA 0 0 30 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.86 NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 12 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 13 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 15 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 16 57320937 57616852 1 1 30 0 1 0 0 0 0.39 0.56 2 NA NA NA NA NA NA NA NA 19.19 0.33 99.56 0 2 3 Whitelist RECA-EU 0.62 0.78 NA NA 0.59 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 17 73277136 80654895 7 7 30 2 1 2 2 0 0.93 0 1 0 0 NA NA NA NA NA NA 19.19 0 99.33 0 2 NA Whitelist RECA-EU 0.96 0 0 0 0.95 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 14 0.23 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0048 X NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0048 RECA 0.57 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47092 C0048 male alive C64 67 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0049 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 3 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.21 NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 8 NA NA 0 0 1 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.17 NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0049 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0049 RECA 0.53 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46929 C0049 male alive C64 49 1 1 NA Included Kidney-RCC RECA EU 1 0.03 RECA-EU::C0050 1 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 2 NA NA 0 0 20 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.88 NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 3 57083918 66979704 8 15 20 4 2 2 0 7 0.26 0 11 0 0 11 7 11 12 8 8 3.98 32.62 67.34 0 2 1 Whitelist RECA-EU 13 0.62 0 0 0 0.59 1 High confidence RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC Canonical without polyploidization 23 0.57 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 4 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 5 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 6 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 7 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 8 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 9 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 10 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 11 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 12 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 13 87973980 95150381 1 7 20 0 1 0 1 5 0.57 0 5 0 0 5 5 5 6 6 6 3.98 19.44 79.7 0 2 3 Whitelist RECA-EU 3 0.77 0 0 0 0.64 1 Linked to high confidence RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC Canonical without polyploidization 9 0.22 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 14 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 15 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 16 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 17 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 18 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 19 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 20 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 21 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 22 NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0050 X NA NA 0 0 20 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0050 RECA 0.47 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47096 C0050 female alive C64 55 2060 2060 NA Included Kidney-RCC RECA EU 1 67.76 RECA-EU::C0051 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 3 83642858 132641410 1 1 4 0 0 0 1 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 17.25 75.22 24.74 0 2 3 Whitelist RECA-EU 0.62 0.49 NA NA 0.59 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 5 NA NA 0 0 4 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.46 NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 7 NA NA 0 0 4 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.42 NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 13 NA NA 0 0 4 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.32 NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0051 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0051 RECA 0.56 1.93 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46933 C0051 male alive C64 73 1170 1170 NA Included Kidney-RCC RECA EU 1 38.49 RECA-EU::C0052 1 4825213 32091855 1 4 26 1 1 0 0 2 0.57 0.05 7 0.01 0 7 3 7 9 3 9 66.68 88.75 10.93 0 2 3 Whitelist RECA-EU 0.68 0.16 0.01 0 0.64 0 High confidence RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC Canonical without polyploidization 6 0.12 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 False negative; manually included RECA-EU::C0052 2 31122545 31600644 1 1 26 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 66.68 99.91 0 0 3 4 Whitelist RECA-EU 0.62 0.9 NA NA 0.59 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 2 0.04 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 3 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 4 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 5 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 6 3555069 44962683 7 8 26 0 2 3 2 1 0.44 0 12 0 0 12 6 12 20 7 15 66.68 79.11 20.74 0 2 4 Whitelist RECA-EU 0.62 0 0 0 0.64 0 High confidence RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC Canonical without polyploidization 15 0.29 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 False negative; manually included RECA-EU::C0052 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 8 28054737 129246539 1 2 26 0 2 0 0 0 0.11 0.38 4 NA 0 4 4 4 5 5 5 66.68 99.99 0 0 3 4 Whitelist RECA-EU 0.54 0.63 NA 0 0.48 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 4 0.08 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 9 NA NA 0 0 26 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.07 NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 10 30231253 30401008 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 0 0 66.68 39.81 60.07 0 4 5 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 2 0.04 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 11 101893322 102396220 1 1 26 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 66.68 99.44 0 0 4 5 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 2 0.04 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 15 NA NA 0 0 26 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 18 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 20 NA NA 0 0 26 0 0 0 0 0 NA 0.11 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.28 NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 22 NA NA 0 0 26 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.51 NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0052 X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0052 RECA 0.5 3.11 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47100 C0052 male alive C64 67 1774 1774 NA Included Kidney-RCC RECA EU 1 58.36 RECA-EU::C0053 1 71848252 74633554 1 2 22 2 0 0 0 0 0.11 0.69 2 NA 0 NA NA NA NA NA NA 42.94 0.1 99.89 0 1 2 Whitelist RECA-EU 0.54 0.89 NA 0 0.48 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 4 0.09 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 2 134045582 163786979 2 4 22 2 0 0 0 2 0.11 0 6 0 0 6 4 5 15 7 9 42.94 75.47 24.42 0 1 2 Whitelist RECA-EU 0.54 0 0 0 0.48 0 High confidence RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC Canonical without polyploidization 6 0.14 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 False negative; manually included RECA-EU::C0053 3 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 4 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 5 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 7 NA NA 0 0 22 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 9 122009510 122061513 1 1 22 0 1 0 0 0 0.39 0.21 2 NA NA NA NA NA NA NA NA 42.94 0.04 99.25 0 2 3 Whitelist RECA-EU 0.62 0.44 NA NA 0.59 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 2 0.05 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 10 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 11 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 12 0 133851895 0 0 22 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 6 3 5 0 0 0 0 0 0 Whitelist RECA-EU NA 0.07 NA NA NA 0 High confidence RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC Canonical without polyploidization 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 False negative; manually included RECA-EU::C0053 13 0 115169878 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 High confidence RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC Canonical without polyploidization 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 False negative; manually included RECA-EU::C0053 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 15 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 17 26492307 27512012 2 2 22 0 0 1 1 0 0.57 0.12 4 NA 0 4 4 4 5 5 5 42.94 1.23 93.46 0 2 3 Whitelist RECA-EU 0.68 0.3 NA 0 0.64 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 4 0.09 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 18 NA NA 0 0 22 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA 0.69 NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0053 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0053 RECA 0.48 2.31 Kidney-RCC NA 0 0 NA 6 RECA-EU DO46937 C0053 male alive C64 57 2036 2036 NA Included Kidney-RCC RECA EU 1 66.97 RECA-EU::C0054 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 7 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 10 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 11 91400233 97228842 4 4 6 0 0 2 2 0 0.26 0 6 0 0 6 6 6 7 7 7 21.25 1.3 98.27 0 1 2 Whitelist RECA-EU 0.62 0 0 0 0.59 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 8 0.67 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 12 NA NA 0 0 6 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.49 NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 16 NA NA 0 0 6 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.35 NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0054 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0054 RECA 0.66 1.86 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47104 C0054 male alive C64 50 1581 1581 NA Included Kidney-RCC RECA EU 1 52.01 RECA-EU::C0057 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 13 NA NA 0 0 2 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.2 NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 20 NA NA 0 0 2 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.15 NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0057 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0057 RECA 0.63 1.94 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46945 C0057 female alive C64 60 1922 1922 NA Included Kidney-RCC RECA EU 1 63.22 RECA-EU::C0060 1 72197438 188860115 1 3 43 3 0 0 0 0 0.03 1 5 0 0 5 4 5 6 5 5 63.93 48.41 48.57 0 1 2 Whitelist RECA-EU 0.41 1 0 0 0.33 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 6 0.07 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 2 55522677 142299418 1 3 43 2 1 0 0 0 0.3 1 1 0 0 NA NA NA NA NA NA 63.93 99.9 0 0 4 NA Whitelist RECA-EU 0.62 1 0 0 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 6 0.07 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 3 51874238 162322564 1 8 43 4 1 0 0 3 0.04 0 11 0 0 11 6 8 12 6 8 63.93 49.42 50.55 0 2 5 Whitelist RECA-EU 0.41 0.02 0 0 0.36 0 High confidence RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC Canonical without polyploidization 13 0.15 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 False negative; manually included RECA-EU::C0060 4 18077671 18322255 1 1 43 1 0 0 0 0 0.39 0.76 2 0.01 NA NA NA NA 7 5 5 63.93 99.31 0.58 0 2 3 Whitelist RECA-EU 0.62 0.93 0.01 NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 5 16215074 54294697 1 3 43 3 0 0 0 0 0.03 0.34 6 0 0 6 5 6 9 5 9 63.93 99.84 0.03 0 4 2 Whitelist RECA-EU 0.41 0.6 0 0 0.33 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 6 0.07 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 6 NA NA 0 0 43 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 7 28860159 44923922 1 2 43 0 2 0 0 0 0.11 0.08 2 0 0 NA NA NA 8 3 6 63.93 70.63 26.62 0 4 5 Whitelist RECA-EU 0.54 0.23 0 0 0.48 0 High confidence RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC Canonical without polyploidization 4 0.05 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 False negative; manually included RECA-EU::C0060 8 89475414 89505178 1 1 43 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 4 4 63.93 67.12 29.46 0 2 3 Whitelist RECA-EU 0.62 0.9 NA NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 9 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 10 89427307 89631850 1 1 43 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 63.93 0.15 99.75 0 0 2 Whitelist RECA-EU 0.62 0.9 NA NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 11 3901044 4044708 1 1 43 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 63.93 99.34 0.11 0 2 3 Whitelist RECA-EU 0.62 0.9 NA NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 12 NA NA 0 0 43 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.9 NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 13 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 14 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 15 51141039 51167143 1 1 43 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 4 3 4 63.93 95.13 0 0 3 4 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 16 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 17 40968364 41027743 1 1 43 0 1 0 0 0 0.39 0.01 1 0 NA NA NA NA 5 3 3 63.93 68.22 27.32 0 7 NA Whitelist RECA-EU 0.62 0.03 0 NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 2 0.02 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 18 NA NA 0 0 43 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 19 32413025 32526279 1 2 43 0 0 0 1 1 0.39 0.01 2 NA NA NA NA NA 5 3 5 63.93 99.38 0.45 0 2 4 Whitelist RECA-EU 0.68 0.05 NA NA 0.59 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 3 0.03 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 20 NA NA 0 0 43 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.82 NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 21 NA NA 0 0 43 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.26 NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 22 NA NA 0 0 43 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.25 NA NA NA 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0060 X 1254853 33957013 1 4 43 3 1 0 0 0 0.11 0.17 7 0 0 7 7 7 7 7 7 63.93 0.18 99.82 0 2 1 Whitelist RECA-EU 0.54 0.38 0 0 0.48 0 No RECA-EU C0060 RECA 0.35 3.06 Kidney-RCC NA 8 0.09 NA 4 RECA-EU DO47116 C0060 male deceased C64 56 477 477 NA Included Kidney-RCC RECA EU 1 15.69 RECA-EU::C0061 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 3 88457829 88571157 1 2 5 0 0 0 1 1 0.39 0 2 NA NA NA NA NA NA NA NA 16.24 44.34 52.58 0 1 2 Whitelist RECA-EU 0.68 0.02 NA NA 0.59 0 High confidence RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC Canonical without polyploidization 3 0.3 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 False negative; manually included RECA-EU::C0061 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 5 100033153 100473233 1 2 5 0 0 0 1 1 0.39 0 3 NA NA NA NA NA 6 6 6 16.24 45.45 54.42 9 3 2 Whitelist RECA-EU 0.68 0.01 NA NA 0.59 0 High confidence RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC Canonical without polyploidization 3 0.3 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 False negative; manually included RECA-EU::C0061 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 10 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 11 NA NA 0 0 5 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.44 NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0061 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0061 RECA 0.54 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46953 C0061 male alive C64 50 1852 1852 NA Included Kidney-RCC RECA EU 1 60.92 RECA-EU::C0063 1 25610170 25736173 1 1 10 0 0 0 1 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 3.55 0 100 0 2 NA Whitelist RECA-EU 0.62 0.78 NA NA 0.59 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 2 0.1 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 2 NA NA 0 0 10 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.81 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 3 NA NA 0 0 10 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.35 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 6 NA NA 0 0 10 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.71 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 7 NA NA 0 0 10 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.26 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 11 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 15 NA NA 0 0 10 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.11 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 17 NA NA 0 0 10 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.48 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 19 56712236 56750345 1 1 10 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 3.55 0 99.83 0 2 NA Whitelist RECA-EU 0.62 0.4 NA NA 0.59 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 2 0.1 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 21 NA NA 0 0 10 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.3 NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 22 22707682 22782267 1 1 10 0 1 0 0 0 0.39 0.11 1 NA NA NA NA NA NA NA NA 3.55 0 100 0 2 NA Whitelist RECA-EU 0.62 0.29 NA NA 0.59 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 2 0.1 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0063 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0063 RECA 0.61 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46957 C0063 female alive C64 75 2156 2156 NA Included Kidney-RCC RECA EU 1 70.92 RECA-EU::C0064 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 7 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.27 NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 11 95199520 124228556 1 1 2 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 5 3 3 23.8 21.58 77.99 0 1 2 Whitelist RECA-EU 0.62 0.25 NA NA 0.59 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 2 0.5 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0064 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0064 RECA 0.22 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46826 C0064 male alive C64 39 1964 1964 NA Included Kidney-RCC RECA EU 1 64.61 RECA-EU::C0065 1 NA NA 0 0 9 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 3 77744339 77858516 1 2 9 0 0 0 1 1 0.39 0 1 0 NA NA NA NA 4 4 4 17.74 42.42 57.38 0 2 NA Whitelist RECA-EU 0.68 0 0 NA 0.59 0 High confidence RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC Canonical without polyploidization 3 0.17 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 False negative; manually included RECA-EU::C0065 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 5 NA NA 0 0 9 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.69 NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 9 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 10 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 12 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 13 0 115169878 0 0 9 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0 NA NA NA 0 High confidence RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 False negative; manually included RECA-EU::C0065 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 15 NA NA 0 0 9 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.09 NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 18 NA NA 0 0 9 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.45 NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0065 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0065 RECA 0.66 1.84 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46961 C0065 male alive C64 59 1824 1824 NA Included Kidney-RCC RECA EU 1 60 RECA-EU::C0066 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 2 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 3 65418245 76275813 14 22 25 4 2 4 4 8 0.84 0 11 0 0 11 6 11 12 6 6 83.66 66.3 33.65 0 2 4 Whitelist RECA-EU 0.89 0 0 0 0.88 0 Low confidence RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC With other complex events 36 0.72 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 4 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 5 112220287 112268993 1 1 25 1 0 0 0 0 0.39 0 1 0 NA NA NA NA 4 4 4 83.66 99.89 0 1 6 NA Whitelist RECA-EU 3 0.62 0 0 NA 0.59 0 Linked to low confidence RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC With other complex events 2 0.04 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 8 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 9 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 10 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 13 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 15 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 16 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 17 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0066 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0066 RECA 0.41 3.57 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47124 C0066 male alive C64 57 1784 1784 NA Included Kidney-RCC RECA EU 1 58.68 RECA-EU::C0068 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 3 0 198022430 0 0 12 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 8 6 8 0 0 0 0 0 0 Whitelist RECA-EU NA 0 0 NA NA 0 High confidence RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC Canonical without polyploidization 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 False negative; manually included RECA-EU::C0068 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 5 88358444 97203069 2 5 12 1 0 0 1 3 0.57 0 5 0 0 5 4 5 11 4 10 88.49 99.86 0 0 3 5 Whitelist RECA-EU 0.93 0 0 0 0.64 0 High confidence RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC Canonical without polyploidization 7 0.29 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 False negative; manually included RECA-EU::C0068 6 NA NA 0 0 12 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 7 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 11 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0068 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0068 RECA 0.36 3.53 Kidney-RCC NA 0 0 NA 4 RECA-EU DO47128 C0068 male alive C64 66 2264 2264 NA Included Kidney-RCC RECA EU 1 74.47 RECA-EU::C0071 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 6 NA NA 0 0 4 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.45 NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 8 NA NA 0 0 4 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.41 NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 10 0 135534747 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0.05 NA NA NA 0 High confidence RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 False negative; manually included RECA-EU::C0071 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 12 75496447 90785294 1 1 4 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA NA NA NA 26.1 11.42 88.5 0 2 3 Whitelist RECA-EU 0.62 0.39 NA NA 0.59 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 16 0 90354753 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist RECA-EU NA 0.02 NA NA NA 0 High confidence RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 False negative; manually included RECA-EU::C0071 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0071 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0071 RECA 0.47 1.78 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46973 C0071 male alive C64 78 2160 2160 NA Included Kidney-RCC RECA EU 1 71.05 RECA-EU::C0073 1 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 2 203714228 211103949 3 37 90 1 1 0 1 34 0.8 0 9 0 0 9 7 9 9 7 9 13.26 14.45 85.44 0 1 2 Whitelist RECA-EU 5 0.77 0 0 0 0.84 1 High confidence RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC Canonical without polyploidization 40 0.22 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 3 78008938 84262741 2 10 90 1 1 0 0 8 0.57 0 3 0 0 NA NA NA 8 8 8 13.26 39.37 60.5 0 2 1 Whitelist RECA-EU 2_5 0.62 0 0 0 0.64 1 Linked to high confidence RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC With other complex events 12 0.07 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 4 NA NA 0 0 90 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.12 NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 5 89519689 113305325 3 32 90 0 1 2 0 29 0.3 0 11 0 0 11 6 6 13 6 6 13.26 42.72 57.15 0 2 3 Whitelist RECA-EU 2 0.74 0 0 0 0.59 1 Linked to high confidence RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC With other complex events 35 0.19 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 6 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 7 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 8 69638909 82447691 1 16 90 0 0 1 0 15 0.39 0 4 0 0 4 3 4 9 4 4 13.26 48 51.99 0 2 1 Whitelist RECA-EU 2_5 0.95 0 0 0 0.59 1 Linked to high confidence RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC Canonical without polyploidization 17 0.09 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 9 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 10 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 11 130004464 130054228 1 1 90 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA NA NA NA 13.26 0.04 99.54 0 1 2 Whitelist RECA-EU 0.62 0.69 NA NA 0.59 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 2 0.01 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 12 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 13 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 14 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 15 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 16 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 17 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 18 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 19 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 20 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 21 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 22 NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0073 X NA NA 0 0 90 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0073 RECA 0.47 1.89 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46977 C0073 male alive C64 40 2245 2245 NA Included Kidney-RCC RECA EU 1 73.85 RECA-EU::C0075 1 NA NA 0 0 18 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist RECA-EU NA 0.37 NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 2 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 3 145866521 145905074 1 1 18 0 1 0 0 0 0.39 0.36 2 NA NA NA NA NA 4 3 3 20.43 44.38 52.45 0 2 3 Whitelist RECA-EU 0.62 0.62 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 4 100948359 190132656 1 2 18 1 0 0 1 0 0.57 0.03 6 0 0 6 6 6 7 7 7 20.43 45.33 54.65 0 1 2 Whitelist RECA-EU 0.68 0.11 0 0 0.64 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 4 0.11 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 6 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 8 38726928 38806980 1 1 18 0 1 0 0 0 0.39 0.23 2 NA NA NA NA NA 6 6 6 20.43 62.16 37.72 0 1 2 Whitelist RECA-EU 0.62 0.47 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 10 29621584 29682464 1 1 18 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 9 7 7 20.43 2.77 97.06 0 2 3 Whitelist RECA-EU 0.62 0.16 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 11 NA NA 0 0 18 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.43 NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 12 110232464 110291443 1 1 18 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 20.43 0.04 99.87 0 2 3 Whitelist RECA-EU 0.62 0.8 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 14 23438679 102739869 1 1 18 1 0 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 20.43 0 85 0 2 NA Whitelist RECA-EU 0.62 0.69 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 16 22183155 68025292 1 3 18 0 2 0 0 1 0.11 0.01 7 NA 0 7 7 7 7 7 7 20.43 21.93 73.54 0 2 1 Whitelist RECA-EU 0.62 0.05 NA 0 0.48 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 5 0.14 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 17 77912543 77958908 1 1 18 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 20.43 0.17 99.83 0 2 3 Whitelist RECA-EU 0.62 0.05 NA NA 0.59 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 20 NA NA 0 0 18 0 0 0 0 0 NA 0.32 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.58 NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0075 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0075 RECA 0.64 1.98 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46980 C0075 female deceased C64 56 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0077 1 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 2 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 3 NA NA 0 0 19 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist RECA-EU NA 0 0 NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 4 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 5 96447966 99601957 5 9 19 3 1 0 1 4 0.28 0 11 0 0 11 7 9 17 9 11 10.37 45.9 53.95 1 2 3 Whitelist RECA-EU 0.62 0 0 0 0.59 1 High confidence RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC Canonical without polyploidization 14 0.37 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 15 NA NA 0 0 19 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.66 NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 19 NA NA 0 0 19 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.57 NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0077 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0077 RECA 0.54 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46984 C0077 male alive C64 65 1957 1957 NA Included Kidney-RCC RECA EU 1 64.38 RECA-EU::C0079 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 3 637363 87264263 1 1 4 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 2.77 43.75 56.2 0 1 2 Whitelist RECA-EU 0.62 0.49 NA NA 0.59 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 12 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.05 NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 15 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.02 NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 19 NA NA 0 0 4 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.22 NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0079 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0079 RECA 0.63 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46988 C0079 female deceased C64 65 1130 1130 NA Included Kidney-RCC RECA EU 1 37.17 RECA-EU::C0080 1 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 2 NA NA 0 0 19 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 3 75471918 84297666 1 6 19 2 0 1 0 3 0.3 0 4 0 0 4 4 4 4 4 4 15.81 42.16 57.7 0 1 2 Whitelist RECA-EU 0.68 0 0 0 0.59 0 High confidence RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC Canonical without polyploidization 9 0.24 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 False negative; manually included RECA-EU::C0080 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 5 88172675 88654687 5 12 19 1 1 1 2 7 0.9 0 4 0 0 4 4 4 4 4 4 15.81 50.89 48.95 1 2 3 Whitelist RECA-EU 0.68 0 0 0 0.92 0 High confidence RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC Canonical without polyploidization 17 0.45 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 False negative; manually included RECA-EU::C0080 6 63618049 63646010 1 1 19 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.81 0 99.85 0 2 NA Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 2 0.05 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 8 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 10 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0080 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0080 RECA 0.66 1.9 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47150 C0080 female alive C64 59 1859 1859 NA Included Kidney-RCC RECA EU 1 61.15 RECA-EU::C0081 1 NA NA 0 0 2 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.35 NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 3 NA NA 0 0 2 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.33 NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 5 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.31 NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 18 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.17 NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0081 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0081 RECA 0.49 1.95 Kidney-RCC NA 0 0 NA 2 RECA-EU DO46992 C0081 female alive C64 76 1842 1842 NA Included Kidney-RCC RECA EU 1 60.59 RECA-EU::C0082 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 3 NA NA 0 0 1 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.21 NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 5 NA NA 0 0 1 0 0 0 0 0 NA 0.06 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.19 NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0082 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0082 RECA 0.42 1.97 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47153 C0082 male deceased C64 54 1029 1029 NA Included Kidney-RCC RECA EU 1 33.85 RECA-EU::C0084 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 8 102553655 107475321 1 1 3 0 0 0 1 0 0.39 0 2 0 NA NA NA NA 6 6 6 8.69 72.92 27.07 0 1 2 Whitelist RECA-EU 0.62 0 0 NA 0.59 0 High confidence RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC Canonical without polyploidization 2 0.33 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 False negative; manually included RECA-EU::C0084 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0084 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0084 RECA 0.36 1.91 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47156 C0084 female alive C64 60 1932 1932 NA Included Kidney-RCC RECA EU 1 63.55 RECA-EU::C0085 1 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 2 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 3 80108501 85829127 6 12 17 2 0 2 2 6 0.57 0 9 0 0 9 9 9 10 10 10 15.46 42.59 57.38 0 2 1 Whitelist RECA-EU 0.62 0 0 0 0.64 1 High confidence RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC Canonical without polyploidization 18 0.53 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 5 109170870 111622423 1 2 17 0 1 0 0 1 0.39 0 1 0 0 NA NA NA 4 4 4 15.46 36.58 63.28 0 2 NA Whitelist RECA-EU 3 0.68 0 0 0 0.59 1 Linked to high confidence RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC With other complex events 3 0.09 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 7 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 9 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 10 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 14 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 17 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0085 X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0085 RECA 0.37 2.05 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47000 C0085 female alive C64 43 2121 2121 NA Included Kidney-RCC RECA EU 1 69.77 RECA-EU::C0086 1 42256602 205546359 1 1 12 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 14.21 38.17 61.83 0 2 3 Whitelist RECA-EU 0.62 0.05 NA NA 0.59 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 2 0.08 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 3 80671236 82518822 1 1 12 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 14.21 41.62 58.33 0 1 2 Whitelist RECA-EU 0.62 0.43 NA NA 0.59 0 High confidence RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC Canonical without polyploidization 2 0.08 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 False negative; manually included RECA-EU::C0086 4 70052527 70167678 1 1 12 0 0 1 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 14.21 0 99.78 0 2 NA Whitelist RECA-EU 0.62 0.41 NA NA 0.59 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 2 0.08 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 5 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 6 52652644 52691481 1 1 12 0 1 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 14.21 55.35 44.5 0 2 NA Whitelist RECA-EU 0.62 0.37 NA NA 0.59 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 2 0.08 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 7 NA NA 0 0 12 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.33 NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 8 37833459 40755308 1 2 12 0 0 0 1 1 0.39 0.12 3 NA NA NA NA NA 4 4 4 14.21 26.11 73.78 0 2 1 Whitelist RECA-EU 0.68 0.31 NA NA 0.59 0 High confidence RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC Canonical without polyploidization 3 0.12 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 False negative; manually included RECA-EU::C0086 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 11 NA NA 0 0 12 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.27 NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 12 NA NA 0 0 12 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.69 NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 16 NA NA 0 0 12 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.52 NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0086 X NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0086 RECA 0.54 1.92 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47159 C0086 female deceased C64 83 1402 1402 NA Included Kidney-RCC RECA EU 1 46.12 RECA-EU::C0091 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.52 NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 6 97008831 103561009 1 1 4 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 10.1 43.17 56.56 1 1 2 Whitelist RECA-EU 0.62 0.01 NA NA 0.59 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 2 0.25 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 16 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.02 NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 17 NA NA 0 0 4 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.27 NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0091 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0091 RECA 0.6 1.88 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47004 C0091 male deceased C64 46 221 221 NA Included Kidney-RCC RECA EU 1 7.27 RECA-EU::C0092 1 200129961 211731360 2 3 16 1 1 0 0 1 0.57 0.03 7 0 0 7 7 7 8 8 8 24.27 16.55 83.45 5 3 2 Whitelist RECA-EU 0.62 0.12 0 0 0.64 0 High confidence RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC Canonical without polyploidization 5 0.16 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 False negative; manually included RECA-EU::C0092 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 3 146115714 146375958 2 2 16 0 0 1 1 0 0.57 0.1 1 0 0 NA NA NA NA NA NA 24.27 59.56 40.39 0 2 NA Whitelist RECA-EU 0.68 0.26 0 0 0.64 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 4 0.12 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 5 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 6 NA NA 0 0 16 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 7 71321186 71883300 1 1 16 1 0 0 0 0 0.39 0.05 2 0 NA NA NA NA NA NA NA 24.27 99.42 0.35 0 2 3 Whitelist RECA-EU 0.62 0.17 0 NA 0.59 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 2 0.06 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 11 NA NA 0 0 16 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.76 NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 14 0 107349540 0 0 16 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.65 NA NA NA 0 High confidence RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC Canonical without polyploidization 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 False negative; manually included RECA-EU::C0092 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 17 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 18 58989410 61321689 3 3 16 0 1 1 1 0 0.8 0.01 2 0 0 NA NA NA NA NA NA 24.27 1.64 98.33 0 1 2 Whitelist RECA-EU 0.87 0.04 0 0 0.84 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 6 0.19 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 20 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0092 X NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0092 RECA 0.46 1.95 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47162 C0092 male alive C64 52 1489 1489 NA Included Kidney-RCC RECA EU 1 48.98 RECA-EU::C0094 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 3 0 198022430 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 High confidence RECA-EU C0094 RECA 0.55 2 Kidney-RCC Canonical without polyploidization 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 False negative; manually included RECA-EU::C0094 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 5 85315837 91304012 1 2 3 0 2 0 0 0 0.11 0.01 5 NA 0 5 5 5 6 6 6 5.85 50.98 48.89 1 3 2 Whitelist RECA-EU 0.54 0.05 NA 0 0.48 0 High confidence RECA-EU C0094 RECA 0.55 2 Kidney-RCC Canonical without polyploidization 4 0.67 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 False negative; manually included RECA-EU::C0094 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 7 NA NA 0 0 3 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.36 NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0094 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0094 RECA 0.55 2 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47165 C0094 female alive C64 51 2021 2021 NA Included Kidney-RCC RECA EU 1 66.48 RECA-EU::C0098 1 216470546 222928134 5 5 29 2 1 1 1 0 0.9 0 3 0 0 NA NA NA 8 4 4 23.99 10.81 89.18 0 3 2 Whitelist RECA-EU 0.93 0.01 0 0 0.92 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 10 0.17 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 2 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 3 137044624 147125131 2 3 29 1 1 0 0 1 0.57 0.01 5 0 0 5 5 5 7 6 6 23.99 96.84 0 0 4 3 Whitelist RECA-EU 0.87 0.06 0 0 0.64 0 High confidence RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC Canonical without polyploidization 5 0.09 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 False negative; manually included RECA-EU::C0098 4 59009834 59283511 1 1 29 1 0 0 0 0 0.39 0.44 2 0 NA NA NA NA NA NA NA 23.99 0.14 99.83 0 1 2 Whitelist RECA-EU 0.62 0.69 0 NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 5 13324111 73458897 1 2 29 1 1 0 0 0 0.57 0.43 4 NA 0 4 3 4 6 4 4 23.99 99.89 0 0 3 1 Whitelist RECA-EU 0.68 0.68 NA 0 0.64 0 High confidence RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC Canonical without polyploidization 4 0.07 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 False negative; manually included RECA-EU::C0098 6 43811367 43897425 1 1 29 0 0 0 1 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.99 0.05 99.71 0 2 3 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 7 23349233 23378103 1 1 29 0 1 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 23.99 0 99.78 0 2 NA Whitelist RECA-EU 0.62 0.87 NA NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 8 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 9 21964487 22128414 1 1 29 1 0 0 0 0 0.39 0.31 2 NA NA NA NA NA NA NA NA 23.99 0.12 99.21 0 1 2 Whitelist RECA-EU 0.62 0.57 NA NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 10 45700958 45730849 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 23.99 0.02 99.8 0 2 3 Whitelist RECA-EU 0.62 1 NA NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 11 8791149 8918832 2 2 29 0 0 1 1 0 0.57 0.15 2 0.42 0 NA NA NA NA NA NA 23.99 0.08 99.5 0 2 3 Whitelist RECA-EU 0.68 0.35 0.42 0 0.64 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 4 0.07 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 12 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 17 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 20 49055038 49580771 1 1 29 0 1 0 0 0 0.39 0.47 2 NA NA NA NA NA NA NA NA 23.99 0.83 98.05 0 2 3 Whitelist RECA-EU 0.62 0.71 NA NA 0.59 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 2 0.03 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0098 X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0098 RECA 0.49 2.02 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47171 C0098 male deceased C64 65 474 474 NA Included Kidney-RCC RECA EU 1 15.59 RECA-EU::C0099 1 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 2 144120765 214902326 4 9 18 1 1 1 1 5 1 0 13 0 0 13 13 13 15 15 15 37.87 28.33 71.58 0 2 3 Whitelist RECA-EU 3 0.62 0 0 0 1 1 High confidence RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC Canonical without polyploidization 13 0.36 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 3 95657165 111808749 1 6 18 0 0 2 0 4 0.11 0 7 0 0 7 7 7 9 9 9 37.87 97.66 2.29 0 1 2 Whitelist RECA-EU 2 0.93 0 0 0 0.48 1 Linked to high confidence RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC Canonical without polyploidization 8 0.22 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 4 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 6 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 1 NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 8 65578667 77575569 2 5 18 0 0 2 0 3 0.11 0 6 0 0 6 6 6 8 8 8 37.87 50.93 48.96 0 1 2 Whitelist RECA-EU 3 0.62 0 0 0 0.48 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 7 0.19 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 9 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 10 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 12 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 13 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 17 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 18 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 21 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 22 NA NA 0 0 18 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.41 NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0099 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 1 No RECA-EU C0099 RECA 0.37 1.9 Kidney-RCC NA 0 0 NA 3 RECA-EU DO47016 C0099 male alive C64 51 1976 1976 NA Included Kidney-RCC RECA EU 1 65 RECA-EU::C0100 1 118652069 205561600 2 4 16 0 1 0 1 2 0.57 0 5 0 0 5 5 5 8 8 8 42.01 47.65 52.35 0 2 1 Whitelist RECA-EU 0.68 0 0 0 0.64 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 6 0.19 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 2 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 3 73578981 101327584 1 5 16 0 0 0 1 4 0.39 0 1 NA 0 NA NA NA NA NA NA 42.01 27.65 72.3 0 2 NA Whitelist RECA-EU 0.68 0.02 NA 0 0.59 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 6 0.19 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 4 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 5 NA NA 0 0 16 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.51 NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 6 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 7 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 8 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 9 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 10 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 11 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 12 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 13 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 14 NA NA 0 0 16 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.06 NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 15 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 16 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 17 55654750 56290815 1 1 16 0 1 0 0 0 0.39 0.36 1 NA NA NA NA NA NA NA NA 42.01 0 100 0 2 NA Whitelist RECA-EU 0.62 0.61 NA NA 0.59 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 18 NA NA 0 0 16 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA 0.01 NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 19 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 20 35506204 35564298 1 1 16 0 1 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 42.01 0.09 98.94 0 2 3 Whitelist RECA-EU 0.62 0.54 NA NA 0.59 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 21 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 22 NA NA 0 0 16 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist RECA-EU NA NA NA NA NA 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 0 0 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 RECA-EU::C0100 X 7473593 7538317 1 1 16 1 0 0 0 0 0.39 0.56 1 NA NA NA NA NA NA NA NA 42.01 100 0 0 1 NA Whitelist RECA-EU 0.62 0.79 NA NA 0.59 0 No RECA-EU C0100 RECA 0.61 1.54 Kidney-RCC NA 2 0.06 NA 2 RECA-EU DO47174 C0100 male deceased C64 70 1508 1508 NA Included Kidney-RCC RECA EU 1 49.61 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 1 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 2 134512507 134532254 1 1 59 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 18.83 16.23 83.67 0 2 NA Whitelist SARC-US 0.62 1 0 NA 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 2 0.02 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 3 47080338 175976669 1 7 59 3 0 0 1 3 0.11 0.02 8 0 0 8 8 8 9 9 9 18.83 16 83.83 0 1 2 Whitelist SARC-US 0.77 0.08 0 0 0.48 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 11 0.09 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 4 56237772 56249704 1 2 59 1 0 0 0 1 0.39 0.8 1 NA NA NA NA NA NA NA NA 18.83 0 99.99 0 2 NA Whitelist SARC-US 0.68 0.95 NA NA 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 3 0.03 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 5 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 6 127589484 148472561 4 6 59 0 2 0 2 2 0.26 0 3 0 0 NA NA NA NA NA NA 18.83 0.01 99.84 0 2 1 Whitelist SARC-US 3 0.62 0 0 0 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 10 0.08 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 7 32926157 148755702 1 5 59 1 0 1 1 2 0.8 0.04 3 0 0 NA NA NA NA NA NA 18.83 0.14 99.64 0 2 1 Whitelist SARC-US 0.68 0.13 0 0 0.84 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 8 0.07 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 8 NA NA 0 0 59 0 0 0 0 0 NA 0.54 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.77 NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 9 NA NA 0 0 59 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 1 NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 10 110611680 112068521 2 2 59 0 0 1 1 0 0.57 0.75 1 0 0 NA NA NA NA NA NA 18.83 0 99.82 0 2 NA Whitelist SARC-US 0.68 0.92 0 0 0.64 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 4 0.03 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 11 20150392 26317788 1 2 59 0 0 0 1 1 0.39 0.75 1 NA NA NA NA NA NA NA NA 18.83 0 99.57 0 2 NA Whitelist SARC-US 0.68 0.92 NA NA 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 3 0.03 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 12 2090470 42718726 1 2 59 2 0 0 0 0 0.11 1 4 NA 0.05 4 4 4 5 5 5 18.83 0.56 99.35 0 1 2 Whitelist SARC-US 0.54 1 NA 0.05 0.48 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 4 0.03 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 13 110899641 111138359 1 1 59 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 3 18.83 82.41 17.59 0 0 1 Whitelist SARC-US 0.62 0.9 NA NA 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 2 0.02 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 14 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 15 72129259 74809824 1 1 59 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA 4 4 4 18.83 58.38 41.49 0 1 2 Whitelist SARC-US 0.62 0.23 NA NA 0.59 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 2 0.02 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 16 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 17 40363697 40404567 1 5 59 1 1 0 1 2 0.8 0 2 0 0 NA NA NA NA NA NA 18.83 50.24 49.74 0 2 3 Whitelist SARC-US 3 0.93 0 0 0 0.84 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 8 0.07 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 18 NA NA 0 0 59 0 0 0 0 0 NA 0.67 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.88 NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 19 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 20 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 21 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f 22 NA NA 0 0 59 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::0da5ee6c-d012-4a57-9992-9d74937aaa5f X 22319803 48914568 2 3 59 1 1 0 0 1 0.57 0.03 1 0 0 NA NA NA NA NA NA 18.83 0.26 99.74 0 2 NA Whitelist SARC-US 0.62 0.11 0 0 0.64 0 No SARC-US 0da5ee6c-d012-4a57-9992-9d74937aaa5f SARC 0.92 1.83 SoftTissue-Leiomyo NA 5 0.04 NA 2 SARC-US DO220174 TCGA-IW-A3M4 0da5ee6c-d012-4a57-9992-9d74937aaa5f female alive C55 NA NA 2229 NA Included SoftTissue-Leiomyo SARC US 0 73.32 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 1 195032181 248533341 9 15 247 2 4 2 1 6 0.55 0.19 1 0 0 NA NA NA NA NA NA 31.21 48.74 48 11 2 NA Whitelist SARC-US 0.62 0.41 0 0 0.64 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 24 0.05 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 2 28253208 184375913 1 11 247 3 1 0 0 7 0.11 0.08 6 0 0 6 6 6 9 9 9 31.21 23.05 74.16 0 1 2 Whitelist SARC-US 0.87 0.24 0 0 0.48 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 15 0.03 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 3 47186345 50108994 3 3 247 1 0 1 1 0 0.8 0.13 3 0 0 NA NA NA 6 3 3 31.21 0.09 99.79 0 2 1 Whitelist SARC-US 0.87 0.33 0 0 0.84 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 4 175608271 189786704 3 3 247 1 1 1 0 0 0.8 0.44 1 0 0 NA NA NA NA NA NA 31.21 0.11 99.79 0 2 NA Whitelist SARC-US 0.87 0.69 0 0 0.84 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 5 61907560 62000621 1 1 247 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 31.21 0.05 99.82 0 1 2 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 2 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 6 65051375 66962262 4 4 247 1 1 1 1 0 1 0.04 5 0 0 5 5 5 9 6 6 31.21 24.58 75.28 0 2 1 Whitelist SARC-US 1 0.15 0 0 1 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 8 0.02 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 7 109919434 140958980 1 2 247 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 31.21 0.08 99.7 0 2 1 Whitelist SARC-US 0.68 0.01 0 0 0.64 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 4 0.01 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 8 NA NA 0 0 247 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 9 434615 126676283 37 41 247 8 9 10 10 4 0.96 0 54 0 0 54 9 34 55 9 13 31.21 31.81 65.08 19 2 3 Whitelist SARC-US 10 0.9 0 0 0 0.97 1 High confidence SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo With other complex events 78 0.16 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 10 11662562 50056640 9 21 247 4 5 4 5 3 0.97 0 12 0 0 12 5 5 22 6 6 31.21 36.47 63.43 7 2 3 Whitelist SARC-US 9 0.68 0 0 0 0.98 1 Low confidence SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo With other complex events 39 0.08 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 11 39261849 50164804 14 14 247 6 2 2 4 0 0.37 0.1 4 0 0 4 4 4 8 8 8 31.21 26.76 72.81 8 1 2 Whitelist SARC-US 0.62 0.26 0 0 0.59 1 Low confidence SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo Canonical without polyploidization 28 0.06 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 12 49689929 126602595 5 7 247 0 2 1 2 2 0.53 0.29 7 0 0 7 7 7 14 10 10 31.21 12.84 87.08 0 3 2 Whitelist SARC-US 17 0.62 0.54 0 0 0.64 1 High confidence SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo Canonical without polyploidization 12 0.02 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 13 NA NA 0 0 247 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 1 0 NA NA 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 14 40733038 107074397 3 3 247 1 1 1 0 0 0.8 1 2 0 0 NA NA NA 6 6 6 31.21 65.21 34.54 0 1 2 Whitelist SARC-US 0.87 1 0 0 0.84 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 15 29852280 94692623 5 6 247 2 0 1 2 1 0.53 0.24 7 0 0 7 7 7 12 10 10 31.21 82.31 12.4 4 2 1 Whitelist SARC-US 0.68 0.48 0 0 0.64 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 11 0.02 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 16 NA NA 0 0 247 0 0 0 0 0 NA 0.84 NA 0.15 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.98 0.15 NA NA 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 17 37441745 62969498 5 8 247 1 1 1 2 3 0.9 0 9 0 0 9 6 9 16 6 7 31.21 8.63 91.36 2 2 3 Whitelist SARC-US 6 0.68 0 0 0 0.92 1 Linked to high confidence SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo Canonical without polyploidization 13 0.03 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 18 NA NA 0 0 247 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.21 NA NA NA 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 19 15807523 16674311 1 1 247 0 1 0 0 0 0.39 0.16 2 0 NA NA NA NA 7 4 4 31.21 79.43 20.07 0 2 3 Whitelist SARC-US 0.62 0.37 0 NA 0.59 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 2 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 20 7149396 14725005 4 8 247 1 3 2 2 0 0.8 0 11 0 0 11 6 11 19 8 8 31.21 30.25 68.77 12 3 2 Whitelist SARC-US 0.87 0 0 0 0.84 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 16 0.03 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 21 NA NA 0 0 247 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f 22 24881463 26255334 1 5 247 0 1 0 0 4 0.39 0 3 0 0 NA NA NA 5 5 5 31.21 78.2 21.8 0 2 1 Whitelist SARC-US 2 0.62 0.02 0 0 0.59 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::12bfd446-2ee5-4664-a492-c023d134f60f X 901314 133108932 1 5 247 2 0 1 1 1 0.57 0.14 6 0 0 6 4 4 7 4 4 31.21 98.78 0.41 0 1 2 Whitelist SARC-US 0.68 0.34 0 0 0.64 1 No SARC-US 12bfd446-2ee5-4664-a492-c023d134f60f SARC 0.88 1.73 SoftTissue-Leiomyo NA 9 0.02 NA 2 SARC-US DO220126 TCGA-FX-A48G 12bfd446-2ee5-4664-a492-c023d134f60f female alive C55 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 1 69086265 109086561 13 13 356 2 3 4 4 0 0.84 0 21 0 0 21 16 18 54 18 21 78.15 69.54 27.49 2 2 3 Whitelist SARC-US 0.9 0 0 0 0.88 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo Canonical without polyploidization 26 0.04 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 2 47029935 227773557 22 63 356 5 3 8 6 41 0.5 0 56 0 0 56 7 13 65 7 14 78.15 49.29 47.92 3 2 3 Whitelist SARC-US 4 0.62 0 0 0 0.64 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo With other complex events 85 0.12 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 3 154316348 154404780 1 1 356 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 4 3 4 78.15 97.51 2.35 0 3 NA Whitelist SARC-US 0.62 0 0 NA 0.59 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 4 18377040 178289698 27 45 356 7 8 6 6 18 0.94 0 46 0 0 46 13 25 57 13 13 78.15 63.65 33.47 2 3 4 Whitelist SARC-US 2_9 0.92 0 0 0 0.96 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo With other complex events 72 0.1 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 5 103155559 103454635 2 2 356 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 6 5 5 78.15 99.41 0.46 0 4 3 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 6 5887196 52586986 27 30 356 9 6 7 5 3 0.73 0 52 0 0 52 7 11 68 7 13 78.15 99.2 0.55 11 4 3 Whitelist SARC-US 4 0.86 0 0 0 0.81 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo With other complex events 57 0.08 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 7 72402131 155562912 15 15 356 3 2 7 3 0 0.27 0.12 17 0 0 17 10 17 27 19 19 78.15 97.49 0 2 3 4 Whitelist SARC-US 0.62 0.31 0 0 0.59 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo With other complex events 30 0.04 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 8 77328426 94639881 3 3 356 0 1 1 1 0 0.8 0.09 6 0 0 6 6 6 13 12 12 78.15 96.26 0.27 0 3 4 Whitelist SARC-US 0.87 0.25 0 0 0.84 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 6 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 9 11837191 29559822 6 16 356 1 2 2 1 10 0.88 0.1 15 0 0 15 7 9 21 7 9 78.15 96.89 0 0 4 5 Whitelist SARC-US 4 0.95 0.27 0 0 0.91 1 High confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo With other complex events 22 0.03 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 10 20677271 109922066 1 9 356 0 5 0 0 4 0 0.31 11 0 0 11 7 8 14 7 7 78.15 28 67.95 0 2 3 Whitelist SARC-US 6 0.48 0.56 0 0 0.07 1 Linked to high confidence SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo Canonical without polyploidization 14 0.02 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 11 94671750 107674165 3 3 356 0 2 1 0 0 0.3 0.45 7 0 0 7 6 7 22 9 9 78.15 54.82 41.06 5 2 3 Whitelist SARC-US 0.62 0.69 0 0 0.59 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 6 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 12 129660209 129783690 1 3 356 0 1 0 0 2 0.39 0.1 2 0 0 NA NA NA 11 5 7 78.15 95.62 0.61 0 3 4 Whitelist SARC-US 11 0.87 0.27 0 0 0.59 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 13 62678157 78941973 1 2 356 1 1 0 0 0 0.57 0.66 4 0 0 4 3 4 11 4 5 78.15 99.26 0.6 0 4 3 Whitelist SARC-US 0.68 0.87 0 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 14 21059825 21182821 1 1 356 0 1 0 0 0 0.39 0 1 NA NA NA NA NA 4 0 4 78.15 99.82 0 0 4 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 15 75849947 86652365 3 4 356 0 1 1 1 1 0.8 0.63 8 0 0 8 8 8 14 10 12 78.15 99.9 0 4 4 5 Whitelist SARC-US 1 0.84 0 0 0.84 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 7 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 16 19936269 22222759 1 2 356 1 0 1 0 0 0.57 0.01 4 NA 0 4 4 4 9 6 6 78.15 38.2 56.63 0 3 4 Whitelist SARC-US 0.68 0.04 NA 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 17 27319818 66986399 1 2 356 0 1 1 0 0 0.57 0.02 11 0 0 11 4 10 14 4 4 78.15 93.19 1.47 0 3 4 Whitelist SARC-US 0.68 0.09 0 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 18 38982028 39941533 4 4 356 0 2 1 1 0 0.57 0.19 4 0 0 4 0 3 6 0 3 78.15 99.79 0.15 0 4 1 Whitelist SARC-US 0.68 0.4 0 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 8 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 19 10339808 10497320 1 1 356 0 1 0 0 0 0.39 0.34 2 NA NA NA NA NA 8 5 5 78.15 91.16 1.57 0 3 4 Whitelist SARC-US 0.62 0.59 NA NA 0.59 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 20 234827 344549 2 2 356 1 1 0 0 0 0.57 0.04 1 NA 0 NA NA NA NA NA NA 78.15 92.65 0 0 4 NA Whitelist SARC-US 0.68 0.14 NA 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 21 NA NA 0 0 356 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 22 17806529 31373859 10 10 356 4 3 2 1 0 0.57 0 9 0 0 9 3 6 10 3 6 78.15 53.61 35.28 15 4 3 Whitelist SARC-US 0.68 0.01 0 0 0.64 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 20 0.03 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::257dc623-41e1-4fa3-859c-c787db10bd60 X 14747546 46437464 16 17 356 5 5 3 3 1 0.8 0 29 0 0 29 3 6 38 4 6 78.15 85.3 14.28 0 5 2 Whitelist SARC-US 0.93 0.01 0 0 0.84 1 No SARC-US 257dc623-41e1-4fa3-859c-c787db10bd60 SARC 0.62 3.3 SoftTissue-Leiomyo NA 33 0.05 nonsynonymous_SNV,17_7574017_A_C,CN:3 3 SARC-US DO220172 TCGA-IS-A3KA 257dc623-41e1-4fa3-859c-c787db10bd60 female deceased C55 NA 413 NA NA Included SoftTissue-Leiomyo SARC US 1 13.59 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 1 145389851 238867163 45 207 1958 18 9 10 8 162 0.13 0 138 0 0 138 7 7 157 7 7 68.95 98.51 1.14 7 3 4 Whitelist SARC-US 11_12_18_19_2_5_7_X 0.62 0 0 0 0.57 1 High confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 252 0.06 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 2 103504725 236615450 15 155 1958 2 7 5 1 140 0.11 0.08 82 0 0 82 6 12 85 6 12 68.95 99.74 0.15 1 3 4 Whitelist SARC-US 1_11_12_17_19_20_5_7_X 0.98 0.23 0 0 0.48 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 170 0.04 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 3 158182221 193942170 25 32 1958 7 8 4 6 7 0.71 0 33 0 0 33 17 17 59 18 23 68.95 68.27 31.7 3 3 2 Whitelist SARC-US 10_2 0.92 0 0 0 0.78 1 High confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 57 0.01 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 4 1180151 7462163 7 15 1958 0 1 2 4 8 0.17 0.04 9 0 0 9 0 4 85 7 10 68.95 34.63 62.94 1 4 3 Whitelist SARC-US 10_12 0.62 0.13 0 0 0.59 1 Linked to high confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 22 0.01 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 5 893523 179304807 19 274 1958 5 5 4 5 255 0.98 0 189 0 0 189 5 15 196 5 15 68.95 30.9 66.43 23 3 2 Whitelist SARC-US 1_12_17_19_2_20_3_7_9_X 0.9 0 0 0 0.99 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 293 0.07 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 6 47184887 51731046 11 60 1958 6 2 2 1 49 0.15 0 42 0 0 42 4 5 134 7 9 68.95 90.53 6.5 20 11 8 Whitelist SARC-US 1_11_12_17_2_7_X 0.8 0 0 0 0.59 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 71 0.02 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 7 159034 86160841 22 251 1958 5 4 5 8 229 0.65 0 250 0 0 250 5 8 272 9 9 68.95 96.95 2.82 34 4 5 Whitelist SARC-US 1_11_12_17_19_2_3_9_X 0.89 0 0 0 0.73 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 273 0.07 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 8 NA NA 0 0 1958 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 22 7 9 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 9 7234461 14473862 4 23 1958 2 0 1 1 19 0.57 0 20 0 0 20 5 5 79 5 7 68.95 71.37 27.96 1 2 5 Whitelist SARC-US 1 0.68 0.01 0 0 0.64 1 Linked to high confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 27 0.01 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 10 9380961 36837631 1 18 1958 2 0 1 2 13 0.53 0 15 0 0 15 5 10 34 5 10 68.95 78.57 18.05 0 3 2 Whitelist SARC-US 12 0.93 0 0 0 0.64 1 Linked to high confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 23 0.01 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 11 12674170 130091312 8 74 1958 2 3 2 1 66 0.8 0.39 72 0 0 72 7 9 78 7 11 68.95 45.93 50.82 3 3 4 Whitelist SARC-US 1_12_17_19_2_5_7_X 0.62 0.64 0 0 0.84 1 High confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 82 0.02 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 12 8404400 101121301 243 725 1958 63 64 56 60 482 0.89 0 292 0 0 292 7 9 297 7 7 68.95 96.1 0.15 64 3 49 Whitelist SARC-US 1_11_16_2_20_3_7_9_X 0.62 0 0 0 0.92 1 High confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 968 0.25 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 13 NA NA 0 0 1958 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 14 NA NA 0 0 1958 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 20 3 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 15 NA NA 0 0 1958 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 0 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 16 83655547 88637358 2 19 1958 0 0 0 2 17 0.11 0.4 7 0 0 7 5 7 16 5 11 68.95 95.19 0 0 3 6 Whitelist SARC-US 1_12_7_9 0.93 0.65 0 0 0.48 1 Linked to high confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc After polyploidization 21 0.01 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 17 50057932 77131857 3 84 1958 1 1 1 0 81 0.8 0 43 0 0 43 5 6 55 5 6 68.95 80.1 19.65 0 5 2 Whitelist SARC-US 1_11_12_19_2_5_7_9_X 0.77 0 0 0 0.84 1 Linked to low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 87 0.02 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 18 19701585 65299990 1 7 1958 1 0 1 0 5 0.57 0 17 0 0 17 5 7 20 5 7 68.95 94.96 0.4 0 4 3 Whitelist SARC-US 5 0.62 0 0 0 0.64 1 Linked to low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 9 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 19 10607945 56113176 8 140 1958 3 0 3 2 132 0.39 0 73 0 0 73 5 7 79 5 7 68.95 71.6 20.18 5 5 4 Whitelist SARC-US 1_10_11_12_17_2_5_7_X 0.87 0 0 0 0.59 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 148 0.04 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 20 48743238 54339930 2 15 1958 0 1 0 1 13 0.57 0.44 9 0 0 9 8 9 27 8 9 68.95 53.77 39.22 0 3 5 Whitelist SARC-US 2_5 0.62 0.68 0 0 0.64 1 Linked to low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc After polyploidization 17 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 21 22037712 22721038 1 9 1958 2 0 0 0 7 0.11 0.35 3 0 0 NA NA NA 10 3 3 68.95 59.69 17.66 0 5 6 Whitelist SARC-US 12_7 0.68 0.61 0 0 0.48 1 Linked to high confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 11 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 22 33770397 33788271 1 1 1958 1 0 0 0 0 0.39 0.08 1 0 NA NA NA NA 19 3 4 68.95 33.55 66.45 0 9 NA Whitelist SARC-US 0.62 0.22 0 NA 0.59 1 No SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2905cbd1-719b-46d9-b8af-8fe4927bc473 X 1766391 152187954 32 230 1958 6 6 11 9 198 0.52 0 145 0 0 145 5 8 149 6 8 68.95 44.32 52.31 14 2 4 Whitelist SARC-US 1_10_11_12_17_19_2_20_5_7_9 0.97 0 0 0 0.64 1 Low confidence SARC-US 2905cbd1-719b-46d9-b8af-8fe4927bc473 SARC 0.92 3.54 SoftTissue-Liposarc With other complex events 262 0.07 NA 49 SARC-US DO220116 TCGA-FX-A2QS 2905cbd1-719b-46d9-b8af-8fe4927bc473 female alive C48.0 NA NA 14 NA Included SoftTissue-Liposarc SARC US 0 0.46 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 1 180979548 248890604 32 46 531 9 10 6 7 14 0.74 0 68 0 0 68 16 22 74 16 22 13.02 26.85 73.14 3 2 1 Whitelist SARC-US 12_4 0.8 0 0 0 0.82 1 High confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc With other complex events 78 0.07 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 2 221042972 235439541 1 5 531 1 0 0 1 3 0.57 0 1 0 0 NA NA NA NA NA NA 13.02 0.99 98.91 0 2 NA Whitelist SARC-US 4 0.68 0 0 0 0.64 1 Linked to low confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc With other complex events 7 0.01 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 3 27501721 196649829 3 7 531 1 1 1 0 4 0.8 0 1 0 0 NA NA NA NA NA NA 13.02 0 99.88 0 2 NA Whitelist SARC-US 0.77 0 0 0 0.84 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 10 0.01 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 4 7659968 47714738 34 199 531 8 7 9 10 165 0.9 0 164 0 0 164 5 7 182 18 18 13.02 10.86 86.42 11 8 2 Whitelist SARC-US 1_12_17 0.85 0 0 0 0.92 1 Low confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc With other complex events 233 0.22 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 5 NA NA 0 0 531 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 6 142005435 163328737 1 2 531 2 0 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 13.02 0.18 99.68 0 2 NA Whitelist SARC-US 0.54 0 0 0 0.48 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 4 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 7 108707208 112707824 1 1 531 0 0 1 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 13.02 0 99.78 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 2 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 8 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 9 20799784 27117317 1 4 531 0 1 1 0 2 0.57 0 6 0 0 6 6 6 7 7 7 13.02 1.3 98 0 2 4 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 6 0.01 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 10 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 11 47359447 47483289 1 1 531 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 13.02 35.16 64.42 0 1 2 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 2 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 12 17335568 78414575 119 288 531 31 29 28 31 169 0.97 0 266 0 0 266 7 7 269 8 9 13.02 30.98 65.23 15 8 2 Whitelist SARC-US 1_4 0.68 0 0 0 0.98 1 High confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc With other complex events 407 0.38 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 13 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 14 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 15 66563133 94287255 2 3 531 0 0 1 1 1 0.57 0 1 0 0 NA NA NA NA NA NA 13.02 0 99.9 0 2 NA Whitelist SARC-US 0.87 0.01 0 0 0.64 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 5 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 16 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 17 27172002 57726288 3 13 531 0 1 2 3 7 0.34 1 9 0 0 9 9 9 10 10 10 13.02 22.1 77.9 2 2 1 Whitelist SARC-US 4 0.68 1 0 0 0.59 1 High confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc Canonical without polyploidization 19 0.02 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 18 77011669 77028086 1 1 531 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 13.02 0.52 99.05 0 2 3 Whitelist SARC-US 0.62 0.02 NA NA 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 2 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 19 596348 34678229 43 45 531 8 16 11 8 2 0.26 0 40 0 0 40 23 40 40 23 23 13.02 22.18 77.65 3 2 1 Whitelist SARC-US 0.62 0 0 0 0.59 1 High confidence SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc With other complex events 88 0.08 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 20 33692861 34302683 1 3 531 0 0 0 1 2 0.39 0.01 2 NA 0 NA NA NA NA NA NA 13.02 44.63 54.4 0 2 3 Whitelist SARC-US 0.87 0.03 NA 0 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 4 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 21 34978435 35015614 1 3 531 0 0 1 0 2 0.39 0.43 2 NA 0 NA NA NA NA NA NA 13.02 0.08 70.21 0 1 2 Whitelist SARC-US 0.62 0.68 NA 0 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 4 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 22 NA NA 0 0 531 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 0 0 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2cacd9d0-8414-4f17-8259-c9d838597f39 X 31464799 76983714 1 4 531 2 0 1 0 1 0.3 0 1 0 0 NA NA NA NA NA NA 13.02 100 0 0 1 NA Whitelist SARC-US 0.68 0 0 0 0.59 1 No SARC-US 2cacd9d0-8414-4f17-8259-c9d838597f39 SARC 0.88 1.92 SoftTissue-Liposarc NA 7 0.01 NA 21 SARC-US DO219968 TCGA-DX-A3LW 2cacd9d0-8414-4f17-8259-c9d838597f39 male alive C48.0 NA NA 3289 NA Included SoftTissue-Liposarc SARC US 0 108.19 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 1 16936361 248844598 163 259 1218 38 40 44 41 96 0.93 0 251 0 0 251 39 74 251 39 45 23.07 35.57 64.26 1 2 1 Whitelist SARC-US 5 0.84 0 0 0 0.95 1 High confidence SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc With other complex events 422 0.17 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 2 139870224 139907307 1 1 1218 0 1 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 23.07 0 99.88 0 2 NA Whitelist SARC-US 0.62 0 0 NA 0.59 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 3 191738310 191772222 2 2 1218 1 1 0 0 0 0.57 0 2 0 0 NA NA NA 10 0 4 23.07 0.36 99.61 2 6 9 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 4 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 5 86635 168032760 417 528 1218 110 102 98 107 111 0.85 0 181 0 0 181 88 88 181 88 88 23.07 2.25 97.59 0 2 3 Whitelist SARC-US 0.98 0 0 0 0.89 1 High confidence SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc With other complex events 945 0.39 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 6 NA NA 0 0 1218 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 7 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 8 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 9 8561618 124815411 1 71 1218 2 1 1 3 64 0.67 0 16 0 0 16 3 5 16 3 5 23.07 0.69 99.19 4 2 9 Whitelist SARC-US 5 0.97 0 0 0 0.74 1 Linked to high confidence SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc With other complex events 78 0.03 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 10 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 11 NA NA 0 0 1218 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 12 41458405 132968720 294 430 1218 62 85 76 71 136 0.29 0 261 0 0 261 5 7 262 5 5 23.07 11.71 87.51 32 2 3 Whitelist SARC-US 0.77 0 0 0 0.59 1 High confidence SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc With other complex events 724 0.3 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 13 21166372 114867952 19 49 1218 3 5 6 5 30 0.8 0.27 25 0 0 25 25 25 25 25 25 23.07 99.26 0.48 0 1 2 Whitelist SARC-US 5 0.86 0.51 0 0 0.84 1 High confidence SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc Canonical without polyploidization 68 0.03 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 14 NA NA 0 0 1218 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 15 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 16 NA NA 0 0 1218 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 17 29551551 29835880 1 1 1218 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 4 3 3 23.07 42.89 52.63 0 1 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 18 38084193 38690954 1 1 1218 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 23.07 99.96 0 0 0 1 Whitelist SARC-US 0.62 0 0 NA 0.59 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 19 NA NA 0 0 1218 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 20 NA NA 0 0 1218 0 0 0 0 0 NA 0.05 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.16 0 NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 21 21321341 21340748 2 3 1218 0 1 1 0 1 0.57 0 1 0 0 NA NA NA 26 3 4 23.07 29.85 47.5 6 2 NA Whitelist SARC-US 0.87 0 0 0 0.64 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 5 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e 22 NA NA 0 0 1218 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::2ff6aede-7bcd-440b-99ab-7a023faf658e X 94002018 94012742 1 1 1218 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 23.07 100 0 0 1 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 2ff6aede-7bcd-440b-99ab-7a023faf658e SARC 0.89 1.88 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219962 TCGA-DX-A2J0 2ff6aede-7bcd-440b-99ab-7a023faf658e male deceased C48.0 NA 295 NA NA Included SoftTissue-Liposarc SARC US 1 9.7 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 1 147269177 248454297 59 204 1246 13 13 15 18 145 0.77 0 175 0 0 175 17 25 199 35 35 86.67 99.17 0.54 2 4 6 Whitelist SARC-US 12_2_4_5_9 0.8 0 0 0 0.84 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 263 0.11 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 2 2725830 47762584 36 155 1246 10 9 11 6 119 0.67 0 122 0 0 122 8 12 166 8 12 86.67 97.44 2.45 4 4 6 Whitelist SARC-US 1_12_5_X 0.91 0 0 0 0.74 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 191 0.08 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 3 139339810 157007096 17 39 1246 4 4 5 4 22 0.98 0.27 38 0 0 38 3 5 60 10 12 86.67 99.86 0 0 6 8 Whitelist SARC-US 1_X 0.89 0.51 0 0 0.99 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 56 0.02 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 4 64107549 135664104 1 4 1246 1 1 0 0 2 0.57 0 5 0 0 5 5 5 27 8 8 86.67 99.92 0 0 5 4 Whitelist SARC-US X 0.68 0 0 0 0.64 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc After polyploidization 6 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 5 111534825 180595776 22 127 1246 5 4 6 7 105 0.82 0 135 0 0 135 15 15 175 15 15 86.67 91.87 5.41 5 4 6 Whitelist SARC-US 1_12_13_X 0.95 0 0 0 0.86 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 149 0.06 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 6 57953521 119636361 1 15 1246 3 0 0 3 9 0.11 0 14 0 0 14 8 11 16 8 8 86.67 90.93 8.81 0 5 4 Whitelist SARC-US 5 0.62 0 0 0 0.48 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 21 0.01 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 7 61912885 158960074 57 126 1246 10 19 15 13 69 0.39 0 126 0 0 126 15 19 126 15 19 86.67 94.39 5.47 4 4 3 Whitelist SARC-US 0.84 0 0 0 0.59 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 183 0.07 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 8 560734 11094179 4 57 1246 2 0 1 1 53 0.57 0.18 44 0 0 44 4 5 61 4 5 86.67 94.21 5.68 0 4 2 Whitelist SARC-US 12_13_4_5_X 0.71 0.39 0 0 0.64 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 61 0.02 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 9 107267770 135095319 1 2 1246 2 0 0 0 0 0.11 0 4 0 0 4 4 4 16 5 5 86.67 81.3 18.52 0 2 4 Whitelist SARC-US 0.54 0 0 0 0.48 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc Before polyploidization 4 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 10 66083313 66121587 2 2 1246 0 0 1 1 0 0.57 0 1 0.01 0 NA NA NA 5 5 5 86.67 99.82 0 0 4 NA Whitelist SARC-US 0.68 0 0.01 0 0.64 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 11 1215903 134523511 10 49 1246 4 5 6 5 29 0.94 0.74 45 0 0 45 15 32 47 15 32 86.67 89.65 9.98 2 3 4 Whitelist SARC-US 1_12_6 0.94 0.91 0 0 0.96 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 69 0.03 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 12 4488859 131646237 146 391 1246 31 35 37 43 245 0.56 0 384 0 0 384 7 7 385 7 7 86.67 99.81 0.01 27 3 24 Whitelist SARC-US 1_13_2_4_5_9 0.79 0 0 0 0.64 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 537 0.22 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 13 20111633 31209010 14 65 1246 3 6 3 2 51 0.46 0 35 0 0 35 6 9 51 6 9 86.67 14.94 85.05 0 4 2 Whitelist SARC-US 12_5_X 0.68 0 0 0 0.64 1 Low confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 79 0.03 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 14 NA NA 0 0 1246 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 15 20622452 31646006 1 28 1246 1 0 1 1 25 0.8 1 19 0 0 19 3 4 24 5 5 86.67 94.11 0 0 36 4 Whitelist SARC-US 12_13_5_X 0.54 1 0 0 0.84 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 31 0.01 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 16 NA NA 0 0 1246 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 17 79941886 80720443 5 5 1246 3 2 0 0 0 0.14 0 5 0 0 5 5 5 5 5 5 86.67 99.62 0 0 4 3 Whitelist SARC-US 0.62 0 0 0 0.59 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 10 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 18 40545718 77167798 1 19 1246 1 1 0 1 16 0.8 0.03 16 0 0 16 3 3 18 3 4 86.67 98.77 0 0 4 20 Whitelist SARC-US 12_5 0.62 0.1 0 0 0.84 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 22 0.01 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 19 NA NA 0 0 1246 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 20 119024 4681903 4 15 1246 1 0 1 2 11 0.57 0 10 0 0 10 4 4 38 5 5 86.67 80.01 12.43 0 1 4 Whitelist SARC-US 12_5_X 0.68 0 0 0 0.64 1 Linked to high confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 19 0.01 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 21 26790748 43805631 1 2 1246 1 0 0 0 1 0.39 0.12 3 0 NA NA NA NA 12 5 9 86.67 70.25 0.04 0 3 5 Whitelist SARC-US 0.68 0.31 0 NA 0.59 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 3 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 22 NA NA 0 0 1246 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3505f91d-bc66-4732-84b6-18c5b32ca6b8 X 77058127 154924953 35 205 1246 10 9 5 11 170 0.5 0 147 0 0 147 7 7 155 7 10 86.67 48.86 51.01 11 18 4 Whitelist SARC-US 1_12_13_2_4 0.85 0 0 0 0.64 1 High confidence SARC-US 3505f91d-bc66-4732-84b6-18c5b32ca6b8 SARC 0.61 3.84 SoftTissue-Liposarc With other complex events 240 0.1 NA 0 SARC-US DO219969 TCGA-DX-A3LY 3505f91d-bc66-4732-84b6-18c5b32ca6b8 male alive C48.0 NA NA 520 NA Included SoftTissue-Liposarc SARC US 0 17.11 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 1 145028117 172009311 22 127 448 7 6 5 4 105 0.82 0 67 0 0 67 5 8 73 5 5 9.41 3 97 4 2 7 Whitelist SARC-US 0.68 0 0 0 0.86 1 Low confidence SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc With other complex events 149 0.17 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 2 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 3 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 4 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 5 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 6 97493979 100516286 3 6 448 1 0 2 0 3 0.3 0 3 0 0 NA NA NA 26 5 5 9.41 3.73 96.12 0 2 3 Whitelist SARC-US X 0.68 0 0 0 0.59 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 9 0.01 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 7 65666837 150670275 14 38 448 6 5 2 1 24 0.18 0 39 0 0 39 5 11 43 5 11 9.41 17.47 79.78 1 2 3 Whitelist SARC-US X 0.41 0 0 0 0.59 1 Low confidence SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc With other complex events 52 0.06 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 8 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 9 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 10 NA NA 0 0 448 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 11 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 12 1653427 91264530 116 272 448 27 29 29 31 156 0.96 0 193 0 0 193 3 5 197 3 5 9.41 10.27 89.64 20 2 3 Whitelist SARC-US 1_7 0.77 0 0 0 0.98 1 High confidence SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc With other complex events 388 0.43 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 13 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 14 NA NA 0 0 448 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 15 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 16 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 17 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 18 NA NA 0 0 448 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 19 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 20 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 21 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c 22 NA NA 0 0 448 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::3608bfbb-2a92-4ec2-a330-bf4790a8b65c X 16247627 46643679 20 108 448 10 6 1 3 88 0.03 0 85 0 0 85 5 5 101 5 5 9.41 100 0 9 1 12 Whitelist SARC-US 1_7 0.54 0 0 0 0.33 1 Low confidence SARC-US 3608bfbb-2a92-4ec2-a330-bf4790a8b65c SARC 0.91 2.17 SoftTissue-Liposarc With other complex events 128 0.14 NA 0 SARC-US DO219960 TCGA-DX-A240 3608bfbb-2a92-4ec2-a330-bf4790a8b65c male alive C63.1 NA NA 1834 NA Included SoftTissue-Liposarc SARC US 0 60.33 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 1 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 2 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 3 4159559 20777597 14 107 1635 4 3 5 2 93 0.7 0.01 61 0 0 61 5 7 73 5 7 28.65 42.81 54.04 0 1 4 Whitelist SARC-US 22 0.62 0.03 0 0 0.78 1 Low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 121 0.04 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 4 127090720 151907883 30 49 1635 4 8 11 7 19 0.34 0.03 60 0 0 60 6 15 79 6 6 28.65 61.26 38.72 6 2 3 Whitelist SARC-US 20 0.93 0.12 0 0 0.59 1 Low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 79 0.02 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 5 492905 14929135 16 100 1635 9 4 3 0 84 0.01 0 43 0 0 43 4 6 61 4 6 28.65 11.03 88.83 8 3 6 Whitelist SARC-US 20_3_9 0.54 0 0 0 0.26 1 Low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 116 0.04 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 6 29105248 126918492 12 206 1635 3 3 3 3 194 1 0 64 0 0 64 4 11 75 7 7 28.65 13.26 86.59 9 2 3 Whitelist SARC-US 20_3_9 0.85 0 0 0 1 1 Low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 218 0.07 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 7 77961769 133784786 8 121 1635 1 3 2 2 113 0.8 0 28 0 0 28 3 4 33 3 4 28.65 1.24 98.53 14 13 2 Whitelist SARC-US 20_3_9 0.87 0 0 0 0.84 1 Linked to high confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 129 0.04 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 8 36818890 48127350 3 74 1635 1 0 1 1 71 0.8 0 14 0 0 14 3 4 35 4 5 28.65 28.93 67.64 1 2 1 Whitelist SARC-US 3 0.68 0 0 0 0.84 1 Linked to low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 77 0.02 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 9 103346393 140789888 50 78 1635 9 13 16 12 28 0.57 0 58 0 0 58 6 10 69 6 10 28.65 72.36 27.49 14 3 2 Whitelist SARC-US 0.94 0 0 0 0.64 1 High confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 128 0.04 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 10 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 11 NA NA 0 0 1635 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 10 7 7 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 12 2301723 133385530 615 1209 1635 164 138 161 152 594 0.45 0 350 0 0 350 5 6 352 5 6 28.65 96.68 2.87 108 1 3 Whitelist SARC-US 22_9 0.78 0 0 0 0.64 1 High confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 1824 0.56 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 13 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 14 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 15 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 16 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 17 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 18 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 19 57077268 57124768 1 2 1635 0 0 0 1 1 0.39 0.33 1 0 NA NA NA NA 6 3 3 28.65 0.59 99.23 0 2 NA Whitelist SARC-US 0.68 0.58 0 NA 0.59 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 3 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 20 33082736 57423558 8 73 1635 4 0 3 1 65 0.17 0 48 0 0 48 6 8 62 6 8 28.65 85.52 7.08 1 1 6 Whitelist SARC-US 3_4 0.87 0 0 0 0.59 1 Low confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 81 0.02 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 21 NA NA 0 0 1635 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d 22 23956086 48888566 4 10 1635 0 2 1 1 6 0.57 0.03 9 0 0 9 5 7 9 5 5 28.65 80.49 19.51 0 1 2 Whitelist SARC-US 3 0.68 0.11 0 0 0.64 1 Linked to high confidence SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc With other complex events 14 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::39f68467-3d37-4b19-aa43-ed7b120c619d X 24105896 100833756 3 3 1635 0 0 1 2 0 0.3 0 9 0 0 9 4 6 14 6 9 28.65 1.55 98.4 0 2 4 Whitelist SARC-US 0.62 0 0 0 0.59 1 No SARC-US 39f68467-3d37-4b19-aa43-ed7b120c619d SARC 0.4 2.04 SoftTissue-Liposarc NA 6 0 NA 49 SARC-US DO219965 TCGA-DX-A3LS 39f68467-3d37-4b19-aa43-ed7b120c619d female deceased C48.0 NA 275 NA NA Included SoftTissue-Liposarc SARC US 1 9.05 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 1 10125082 150844158 1 4 47 1 2 0 0 1 0.3 0.79 4 0 0 4 3 4 4 3 3 57.18 99.93 0 0 4 3 Whitelist SARC-US 0.54 0.94 0 0 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 7 0.07 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 2 NA NA 0 0 47 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.95 NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 3 NA NA 0 0 47 0 0 0 0 0 NA 0.38 NA 0 NA NA NA NA 7 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0.63 0 NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 4 NA NA 0 0 47 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.93 NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 5 NA NA 0 0 47 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.62 NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 6 132496958 132733613 1 1 47 0 1 0 0 0 0.39 0.53 2 NA NA NA NA NA 6 6 6 57.18 33.86 63.2 0 2 3 Whitelist SARC-US 0.62 0.76 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 7 21461598 21487055 1 1 47 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 4 4 57.18 36.4 60.89 0 2 3 Whitelist SARC-US 0.62 0.76 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 8 3659519 82202958 1 7 47 0 2 0 0 5 0.11 0 6 0 0 6 3 4 6 3 4 57.18 96.58 0 0 4 5 Whitelist SARC-US 0.77 0 0 0 0.48 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 9 0.1 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 9 17223463 17244431 1 1 47 0 0 0 1 0 0.39 1 1 NA NA NA NA NA 4 3 3 57.18 81.05 16.41 0 4 NA Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 10 25526876 28918299 2 2 47 1 0 0 1 0 0.57 0 4 0 0 4 4 4 8 7 8 57.18 89.52 6.9 9 1 2 Whitelist SARC-US 0.68 0 0 0 0.64 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 4 0.04 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 11 36351495 99958740 1 3 47 1 2 0 0 0 0.3 0.48 7 0 0 7 3 7 9 4 4 57.18 55.45 44.13 0 3 2 Whitelist SARC-US 0.62 0.73 0 0 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 6 0.06 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 12 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 13 33172656 80735260 1 1 47 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 57.18 58.7 41.3 0 2 3 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 14 NA NA 0 0 47 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.4 NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 15 75329549 75508813 1 1 47 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 57.18 99.87 0 0 4 5 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 16 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 17 7577765 7597898 1 1 47 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 57.18 22.78 72.01 0 4 NA Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 18 22671819 22801296 1 1 47 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 9 4 7 57.18 30.59 69.37 0 4 5 Whitelist SARC-US 0.62 0 0 NA 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 2 0.02 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 19 9741413 42493806 1 3 47 2 1 0 0 0 0.3 0 4 0 0 4 3 4 8 5 5 57.18 89.19 2.94 1 3 2 Whitelist SARC-US 0.62 0 0 0 0.59 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 6 0.06 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 20 4533356 37708072 1 3 47 0 3 0 0 0 0.03 0.08 5 0 0 5 4 5 6 4 4 57.18 92.98 0 0 3 4 Whitelist SARC-US 0.41 0.23 0 0 0.33 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 6 0.06 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 21 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d 22 NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::4e8c570c-3cbe-4878-8b2c-b966868dd60d X NA NA 0 0 47 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 4e8c570c-3cbe-4878-8b2c-b966868dd60d SARC 0.7 2.79 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578535_C_T,CN:4 2 SARC-US DO220163 TCGA-IF-A4AJ 4e8c570c-3cbe-4878-8b2c-b966868dd60d male deceased C40.2 NA 767 NA NA Included SoftTissue-Leiomyo SARC US 1 25.23 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 1 NA NA 0 0 10 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.78 NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 2 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 4 90029843 126519239 1 1 10 1 0 0 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 13.16 0 99.9 0 2 NA Whitelist SARC-US 0.62 0.74 NA NA 0.59 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 2 0.1 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 6 22352825 22845548 1 2 10 1 1 0 0 0 0.57 0.12 2 NA 0 NA NA NA NA NA NA 13.16 0.25 99.6 0 2 3 Whitelist SARC-US 0.68 0.3 NA 0 0.64 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 4 0.2 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 7 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 8 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 9 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 10 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 11 123284788 123404227 1 1 10 1 0 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 13.16 0 99.57 0 2 NA Whitelist SARC-US 0.62 0.63 NA NA 0.59 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 2 0.1 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 12 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 13 NA NA 0 0 10 0 0 0 0 0 NA 0.3 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.54 NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 14 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 17 7508900 7751482 1 1 10 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 13.16 27.34 68.22 0 1 NA Whitelist SARC-US 0.62 0.48 NA NA 0.59 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 2 0.1 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 19 56158331 56394670 1 1 10 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 3 4 13.16 54.38 38.33 0 1 2 Whitelist SARC-US 0.62 0.01 NA NA 0.59 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 2 0.1 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 20 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 21 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a 22 NA NA 0 0 10 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.03 NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::590fdb76-20ef-4f95-9783-7d80e7a25e5a X NA NA 0 0 10 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.65 NA NA NA 0 No SARC-US 590fdb76-20ef-4f95-9783-7d80e7a25e5a SARC 0.95 1.87 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220157 TCGA-IE-A4EK 590fdb76-20ef-4f95-9783-7d80e7a25e5a male alive C48.0 NA NA 42 NA Included SoftTissue-Leiomyo SARC US 0 1.38 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 1 33064988 33080363 2 2 339 0 2 0 0 0 0.11 0.54 1 0 0 NA NA NA 15 9 15 36.67 45.46 51.24 0 1 NA Whitelist SARC-US 0.54 0.77 0 0 0.48 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 4 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 2 3363332 238409727 23 43 339 6 7 5 5 20 0.92 0 39 0 0 39 32 39 46 34 41 36.67 22.43 77.48 9 1 2 Whitelist SARC-US 0.98 0 0 0 0.94 1 High confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo Canonical without polyploidization 66 0.1 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 3 95733851 125309240 12 12 339 3 3 1 5 0 0.45 0.34 16 0 0 16 14 16 31 15 15 36.67 41.2 55.64 0 2 1 Whitelist SARC-US 0.68 0.59 0 0 0.64 1 High confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo Canonical without polyploidization 24 0.04 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 4 2524924 178982445 4 4 339 0 0 1 3 0 0.11 0.16 9 0 0 9 7 9 11 9 9 36.67 0.67 99.19 4 2 1 Whitelist SARC-US 0.54 0.36 0 0 0.48 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 8 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 5 102398857 102434880 2 2 339 0 1 1 0 0 0.57 0.26 1 0 0 NA NA NA 8 5 5 36.67 23.85 76.04 0 2 NA Whitelist SARC-US 0.68 0.51 0 0 0.64 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 4 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 6 68646592 92666081 1 2 339 0 2 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 36.67 10.43 89.44 0 2 NA Whitelist SARC-US 0.54 0 0 0 0.48 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 4 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 7 4154645 125672436 1 5 339 5 0 0 0 0 0 0 8 0 0 8 8 8 9 9 9 36.67 0.42 99.36 0 1 2 Whitelist SARC-US 0.1 0.02 0 0 0.07 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 10 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 8 NA NA 0 0 339 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 0 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 9 1710868 35411917 31 33 339 5 8 8 10 2 0.65 0 44 0 0 44 32 34 44 32 34 36.67 21.18 78.67 1 1 2 Whitelist SARC-US 0.87 0 0 0 0.73 1 High confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo Canonical without polyploidization 64 0.09 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 10 109103437 109122933 1 1 339 0 1 0 0 0 0.39 0.01 2 0 NA NA NA NA 6 5 5 36.67 99.66 0.17 0 1 2 Whitelist SARC-US 0.62 0.04 0 NA 0.59 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 2 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 11 9339702 93277570 1 9 339 1 2 0 0 6 0.3 0.16 5 0 0 5 3 5 7 5 5 36.67 0.31 99.14 0 2 1 Whitelist SARC-US 0.85 0.36 0 0 0.59 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 12 0.02 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 12 107038045 133376551 80 81 339 22 17 21 20 1 0.87 0 87 0 0 87 10 24 109 10 24 36.67 33.08 62.82 7 3 2 Whitelist SARC-US 0.93 0 0 0 0.91 1 High confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo With other complex events 161 0.24 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 13 89546954 111210431 1 4 339 1 0 0 1 2 0.57 0.02 4 0 0 4 4 4 4 4 4 36.67 78.19 21.81 0 1 2 Whitelist SARC-US 9 0.68 0.07 0 0 0.64 1 Linked to high confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo Canonical without polyploidization 6 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 14 NA NA 0 0 339 0 0 0 0 0 NA 0.64 NA 0 NA NA NA NA 8 8 8 0 0 0 0 0 0 Whitelist SARC-US NA 0.85 0 NA NA 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 0 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 15 91662964 91959376 2 2 339 0 0 1 1 0 0.57 0.24 1 0 0 NA NA NA 7 5 7 36.67 59.66 39.66 0 2 NA Whitelist SARC-US 0.68 0.48 0 0 0.64 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 4 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 16 3616081 84764407 9 11 339 2 2 2 3 2 0.95 0 10 0 0 10 10 10 12 10 10 36.67 36.16 63.76 0 1 2 Whitelist SARC-US 0.87 0.02 0 0 0.97 1 High confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo Canonical without polyploidization 20 0.03 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 17 20763092 63208342 1 5 339 0 2 0 1 2 0.3 0.24 3 0 0 NA NA NA NA NA NA 36.67 26.45 68.22 0 1 2 Whitelist SARC-US 3 0.68 0.47 0 0 0.59 1 Linked to high confidence SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo With other complex events 8 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 18 11135395 11315137 1 1 339 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 36.67 99.99 0 0 0 1 Whitelist SARC-US 0.62 0.05 NA NA 0.59 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 2 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 19 14388762 14575720 1 1 339 0 1 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 36.67 3.3 96.53 0 2 NA Whitelist SARC-US 0.62 0.22 NA NA 0.59 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 2 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 20 5961498 22807610 5 5 339 1 1 0 3 0 0.28 0.71 7 0 0 7 3 7 8 3 3 36.67 20.74 78.27 0 2 3 Whitelist SARC-US 0.62 0.9 0 0 0.59 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 10 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 21 NA NA 0 0 339 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 0 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 22 NA NA 0 0 339 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 0 0 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::5a64f7e9-3833-4a3c-962b-13eb3e305c69 X 141876421 142464013 2 2 339 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 13 7 7 36.67 7.93 91.84 0 1 3 Whitelist SARC-US 0.68 0.04 0 0 0.64 1 No SARC-US 5a64f7e9-3833-4a3c-962b-13eb3e305c69 SARC 0.72 1.65 SoftTissue-Leiomyo NA 4 0.01 stopgain,17_7576897_A_G,CN:1 2 SARC-US DO220168 TCGA-IS-A3K7 5a64f7e9-3833-4a3c-962b-13eb3e305c69 female alive C55 NA NA 4056 NA Included SoftTissue-Leiomyo SARC US 0 133.42 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 1 152775873 205026034 5 94 318 0 3 0 2 89 0.14 0 49 0 0 49 5 5 50 5 8 0.79 0.99 99 4 2 4 Whitelist SARC-US 6 0.54 0 0 0 0.59 1 Linked to high confidence SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc With other complex events 99 0.16 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 2 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 3 NA NA 0 0 318 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 11 0 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.04 0 NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 4 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 5 91519994 165738784 3 18 318 0 1 1 1 15 0.8 0.64 1 0 0 NA NA NA NA NA NA 0.79 0 99.88 9 2 NA Whitelist SARC-US 1_6 0.68 0.85 0 0 0.84 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 21 0.03 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 6 111055845 148640744 1 32 318 1 3 1 1 26 0.57 0 22 0 0 22 6 12 27 6 12 0.79 3.88 95.98 1 2 3 Whitelist SARC-US 1 0.85 0 0 0 0.64 1 Linked to high confidence SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc With other complex events 38 0.06 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 7 2506893 15600830 2 21 318 0 1 1 0 19 0.57 0.21 16 0 0 16 3 5 16 3 5 0.79 1.86 97.91 0 3 2 Whitelist SARC-US 1_6 0.66 0.44 0 0 0.64 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 23 0.04 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 8 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 9 71399529 72304191 2 8 318 0 0 2 0 6 0.11 0 6 0 0 6 3 5 16 5 7 0.79 1.52 98.34 0 4 2 Whitelist SARC-US 0.54 0 0 0 0.48 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 10 0.02 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 10 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 11 NA NA 0 0 318 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist SARC-US NA 0.23 0 NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 12 57596845 75161279 53 183 318 8 11 20 14 130 0.11 0 104 0 0 104 4 4 106 4 5 0.79 3.4 96.52 8 2 4 Whitelist SARC-US 1_6 0.99 0 0 0 0.49 1 High confidence SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc With other complex events 236 0.37 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 13 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 14 NA NA 0 0 318 0 0 0 0 0 NA 0.75 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist SARC-US NA 0.91 0 NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 15 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 16 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 17 75081944 80353287 1 14 318 2 0 1 0 11 0.3 0 11 0 0 11 3 11 14 3 11 0.79 1.25 98.45 0 2 3 Whitelist SARC-US 0.9 0 0 0 0.59 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 17 0.03 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 18 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 19 NA NA 0 0 318 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.1 NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 20 21936559 39826037 1 15 318 2 0 0 1 12 0.3 0 9 0 0 9 3 5 15 4 5 0.79 5.47 93.54 1 4 3 Whitelist SARC-US 0.62 0 0 0 0.59 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 18 0.03 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 21 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 22 NA NA 0 0 318 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.68 NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6201394f-b70e-4f14-9519-ff9d5f06eb09 X NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 6201394f-b70e-4f14-9519-ff9d5f06eb09 SARC 0.3 2.03 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219973 TCGA-DX-A3U6 6201394f-b70e-4f14-9519-ff9d5f06eb09 female alive C48.0 NA NA 540 NA Included SoftTissue-Liposarc SARC US 0 17.76 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 1 52359894 60254337 7 54 890 1 0 3 3 47 0.28 0.45 33 0 0 33 4 4 41 5 5 21.09 1.89 98.11 2 4 2 Whitelist SARC-US 5_14 1 0.7 0 0 0.59 1 Low confidence SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc With other complex events 61 0.03 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 2 41256062 41267745 1 1 890 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 21.09 0 99.9 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 2 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 3 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 4 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 5 82214 43509706 74 315 890 21 23 15 15 241 0.43 0 196 0 0 196 6 8 196 6 7 21.09 15.19 84.68 43 4 1 Whitelist SARC-US 14 0.72 0 0 0 0.64 1 High confidence SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc With other complex events 389 0.22 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 6 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 7 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 8 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 9 82255424 82268500 1 1 890 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 21.09 0 99.3 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 2 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 10 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 11 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 12 48350328 127948831 400 708 890 102 98 95 105 308 0.9 0 291 0 0 291 4 4 295 4 4 21.09 71.25 25 71 1 3 Whitelist SARC-US 5_14 1 0 0 0 0.92 1 High confidence SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc With other complex events 1108 0.62 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 13 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 14 95901595 105399403 10 79 890 4 1 1 4 69 0.31 0 34 0 0 34 5 6 40 5 5 21.09 7.19 91.9 0 11 14 Whitelist SARC-US 5 0.76 0 0 0 0.59 1 Low confidence SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc With other complex events 89 0.05 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 15 22563932 54759738 23 23 890 5 4 6 8 0 0.68 1 26 0 0 26 4 10 28 4 11 21.09 83.53 10.83 0 1 2 Whitelist SARC-US 0.79 1 0 0 0.75 1 Low confidence SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc With other complex events 46 0.03 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 16 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 17 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 18 NA NA 0 0 890 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 19 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 20 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 21 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba 22 NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::6b189eff-b919-49d6-8775-dbf32c9ccbba X NA NA 0 0 890 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 6b189eff-b919-49d6-8775-dbf32c9ccbba SARC 0.88 2 SoftTissue-Liposarc NA 0 0 NA 48 SARC-US DO219961 TCGA-DX-A2IZ 6b189eff-b919-49d6-8775-dbf32c9ccbba male alive C48.0 NA NA 261 NA Included SoftTissue-Liposarc SARC US 0 8.59 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 1 145112810 172403220 256 432 1088 73 65 56 62 176 0.5 0 440 0 0 440 7 7 461 11 21 70.54 59.34 40.66 22 8 16 Whitelist SARC-US 7 0.75 0 0 0 0.64 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 688 0.32 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 2 1619612 6515519 2 12 1088 0 1 1 0 10 0.57 0 8 0 0 8 5 8 27 12 12 70.54 14.24 85.66 1 3 2 Whitelist SARC-US 12_22 0.62 0 0 0 0.64 1 Linked to high confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc Canonical without polyploidization 14 0.01 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 3 3279482 196670440 58 170 1088 16 15 14 13 112 0.95 0 153 0 0 153 14 24 156 14 14 70.54 54.22 42.65 17 4 3 Whitelist SARC-US 12_14_17_2_22_5_8 0.63 0 0 0 0.97 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 228 0.1 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 4 121551106 185803467 27 30 1088 9 3 7 8 3 0.38 0 25 0 0 25 25 25 36 31 31 70.54 96.92 0.63 0 4 3 Whitelist SARC-US 0.62 0 0 0 0.59 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc After polyploidization 57 0.03 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 5 703397 41841709 53 170 1088 10 12 18 13 117 0.45 0 158 0 0 158 9 20 164 9 20 70.54 95.06 2.24 15 4 5 Whitelist SARC-US 12_17_22_3_8 0.82 0 0 0 0.64 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 223 0.1 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 6 20467962 89499353 1 7 1088 3 0 0 1 3 0.11 0 11 0 0 11 6 9 13 8 8 70.54 99.78 0.08 0 3 4 Whitelist SARC-US 2 0.68 0 0 0 0.48 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 11 0.01 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 7 113482279 131109557 47 215 1088 12 8 14 13 168 0.62 0 167 0 0 167 5 6 177 5 6 70.54 83.73 16.05 18 6 4 Whitelist SARC-US 1 0.62 0 0 0 0.7 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 262 0.12 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 8 13601211 30077763 7 60 1088 1 4 2 0 53 0.17 0.04 40 0 0 40 10 10 52 10 12 70.54 87.14 9.44 1 2 3 Whitelist SARC-US 12_14_17_3_5 0.91 0.13 0 0 0.59 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 67 0.03 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 9 30908471 36266304 2 3 1088 1 0 1 0 1 0.57 0 4 0 0 4 4 4 19 4 6 70.54 93.89 5.96 0 2 3 Whitelist SARC-US 0.87 0.01 0 0 0.64 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 5 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 10 NA NA 0 0 1088 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 0 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 11 19960853 19998734 1 1 1088 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 9 4 5 70.54 42.89 53.5 0 1 2 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 2 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 12 57518989 72095052 25 74 1088 7 6 5 7 49 0.93 0 37 0 0 37 19 22 50 26 26 70.54 96.12 0.07 25 4 3 Whitelist SARC-US 17_22_3_5_8 0.98 0 0 0 0.95 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 99 0.05 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 13 NA NA 0 0 1088 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 0 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 14 29873311 73266124 9 32 1088 3 3 2 1 23 0.75 0 25 0 0 25 7 7 38 7 7 70.54 52.51 46.57 0 3 2 Whitelist SARC-US 3_5_8 0.74 0 0 0 0.83 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 41 0.02 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 15 48606268 48725249 1 1 1088 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 70.54 99.89 0 0 3 4 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 2 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 16 NA NA 0 0 1088 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 0 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 17 38121352 80696808 7 71 1088 1 2 2 2 64 0.93 0 51 0 0 51 6 11 53 6 9 70.54 94.74 0.25 8 4 5 Whitelist SARC-US 12_22_3_5_8 0.93 0 0 0 0.95 1 Low confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc With other complex events 78 0.04 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 18 21042489 50075039 4 5 1088 0 1 1 2 1 0.57 0 9 0 0 9 7 9 15 10 10 70.54 99.38 0.56 0 4 3 Whitelist SARC-US 0.93 0 0 0 0.64 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 9 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 19 5448545 15663137 4 4 1088 1 2 1 0 0 0.57 0 11 0 0 11 11 11 16 12 13 70.54 92.72 0 0 4 6 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 8 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 20 NA NA 0 0 1088 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 0 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 21 31155754 31172501 1 1 1088 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 70.54 0.58 76.77 0 2 3 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc NA 2 0 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb 22 32381273 48585047 2 17 1088 0 0 1 1 15 0.57 0 13 0 0 13 12 13 24 13 13 70.54 75.64 23.12 2 2 3 Whitelist SARC-US 12_3_5 0.62 0 0 0 0.64 1 Linked to high confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc Canonical without polyploidization 19 0.01 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::73d2e8ef-4e10-416a-845b-f48374e48ecb X 22888722 42758155 7 7 1088 2 0 3 2 0 0.44 0 13 0 0 13 12 13 20 18 18 70.54 70.97 25.87 2 1 2 Whitelist SARC-US 0.68 0 0 0 0.64 1 High confidence SARC-US 73d2e8ef-4e10-416a-845b-f48374e48ecb SARC 0.55 3.11 SoftTissue-Liposarc Canonical without polyploidization 14 0.01 NA 4 SARC-US DO219951 TCGA-DX-A1L2 73d2e8ef-4e10-416a-845b-f48374e48ecb male alive C48.0 NA NA 1291 NA Included SoftTissue-Liposarc SARC US 0 42.47 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 1 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 2 NA NA 0 0 25 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.9 NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 3 181342166 182448046 1 1 25 1 0 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 12.35 0.56 99.39 0 1 2 Whitelist SARC-US 0.62 0.5 NA NA 0.59 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 4 85490673 131704026 2 2 25 0 0 1 1 0 0.57 0.08 1 0 0 NA NA NA NA NA NA 12.35 0 99.99 0 2 NA Whitelist SARC-US 0.68 0.23 0 0 0.64 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 4 0.08 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 5 125901873 174270323 1 3 25 2 1 0 0 0 0.3 0.07 3 0 0 NA NA NA NA NA NA 12.35 0.02 99.85 0 2 1 Whitelist SARC-US 0.62 0.2 0 0 0.59 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 6 0.12 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 6 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 7 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 8 113065845 140789858 2 2 25 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 12.35 0 99.99 0 2 NA Whitelist SARC-US 0.68 0.13 0 0 0.64 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 4 0.08 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 9 25354225 25393085 1 1 25 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.35 0 99.3 0 2 NA Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 10 44819098 52294292 2 2 25 1 1 0 0 0 0.57 0 1 0 0 NA NA NA NA NA NA 12.35 59.82 40.07 5 2 NA Whitelist SARC-US 0.68 0 0 0 0.64 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 4 0.08 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 11 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 12 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 13 NA NA 0 0 25 0 0 0 0 0 NA 0.21 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist SARC-US NA 0.44 NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 14 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 15 NA NA 0 0 25 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.35 NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 16 NA NA 0 0 25 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.74 NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 17 7589342 65084397 2 4 25 0 0 1 1 2 0.57 0 3 0.12 0.03 NA NA NA NA NA NA 12.35 55.66 44.34 0 1 2 Whitelist SARC-US 0.68 0.02 0.12 0.03 0.64 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 6 0.12 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 18 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 19 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 20 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 21 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 22 NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 X NA NA 0 0 25 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 SARC 0.91 1.86 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO220118 TCGA-FX-A3NJ 7bab6742-4e3d-4fcf-9b90-d3e0218b4d79 male alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 1 95541391 95711379 2 3 229 1 0 0 1 1 0.57 0.39 1 0 0 NA NA NA 4 3 3 27.48 48.74 48.28 0 1 NA Whitelist SARC-US 0.87 0.64 0 0 0.64 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 5 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 2 1306725 242284081 1 16 229 5 5 3 1 2 0.37 0.19 11 0 0 11 9 11 11 9 9 27.48 0.39 99.51 0 2 1 Whitelist SARC-US 0.62 0.41 0 0 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 30 0.07 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 3 94022172 188180159 25 29 229 9 7 4 5 4 0.5 0 9 0 0 9 5 9 11 5 5 27.48 20.04 79.82 0 1 2 Whitelist SARC-US 18_X 0.88 0 0 0 0.64 1 Low confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo With other complex events 54 0.12 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 4 158296950 159212213 4 4 229 2 2 0 0 0 0.26 0.29 1 0 0 NA NA NA NA NA NA 27.48 0.07 99.9 1 2 NA Whitelist SARC-US 0.62 0.54 0 0 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 8 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 5 24345566 176462524 1 8 229 4 1 0 0 3 0.04 0.28 6 0 0 6 3 6 7 3 3 27.48 0.18 99.67 0 2 1 Whitelist SARC-US 0.54 0.52 0 0 0.36 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 13 0.03 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 6 88233901 150080471 1 2 229 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 27.48 0.14 99.71 1 1 2 Whitelist SARC-US 0.54 0 NA 0 0.48 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 4 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 7 110449622 127696991 5 5 229 0 1 2 2 0 0.53 0.56 8 0 0 8 6 7 18 10 11 27.48 59.59 37.55 0 4 2 Whitelist SARC-US 0.68 0.78 0 0 0.64 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 10 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 8 62953261 127318865 4 7 229 1 2 0 1 3 0.57 0.45 7 0 0 7 3 5 13 7 9 27.48 42.79 57.11 0 2 1 Whitelist SARC-US 21 0.77 0.7 0 0 0.64 1 Linked to high confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo With other complex events 11 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 9 21534126 26695383 2 3 229 2 0 0 0 1 0.11 0.09 2 0 0 NA NA NA 9 7 7 27.48 28.61 70.68 0 0 1 Whitelist SARC-US 0.62 0.25 0 0 0.48 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 5 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 10 73155432 73701359 1 1 229 0 0 1 0 0 0.39 0.08 2 0 NA NA NA NA NA NA NA 27.48 91.85 7.97 0 1 2 Whitelist SARC-US 0.62 0.23 0 NA 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 2 0 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 11 32076795 134868950 1 6 229 2 0 2 1 1 0.53 1 12 0 0 12 8 10 12 8 8 27.48 34.23 65.52 0 1 2 Whitelist SARC-US 0.68 1 0 0 0.64 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 11 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 12 2593202 120783815 1 11 229 1 2 0 0 8 0.3 0.88 1 0 0 NA NA NA NA NA NA 27.48 0 99.92 0 2 NA Whitelist SARC-US 0.98 1 0 0 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 14 0.03 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 13 95519454 106660430 3 3 229 1 0 1 1 0 0.8 0.46 1 0 0 NA NA NA 6 5 5 27.48 73.9 26.1 0 1 NA Whitelist SARC-US 0.87 0.71 0 0 0.84 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 14 50897113 75521200 1 3 229 3 0 0 0 0 0.03 0.13 6 0 0 6 3 6 7 4 4 27.48 17.19 81.9 0 1 2 Whitelist SARC-US 0.41 0.32 0 0 0.33 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 15 42717436 83458438 1 3 229 2 1 0 0 0 0.3 0.54 8 0 0 8 6 8 9 7 7 27.48 5.61 94.29 0 2 1 Whitelist SARC-US 0.62 0.77 0 0 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 6 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 16 30953514 89286258 3 11 229 0 0 1 2 8 0.3 0 4 0 0 4 0 4 6 4 6 27.48 61.12 33.61 0 1 2 Whitelist SARC-US 18 0.62 0 0 0 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 14 0.03 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 17 28526654 65297776 1 7 229 1 3 0 0 3 0.11 0.04 13 0 0 13 6 13 14 6 6 27.48 99.93 0.06 0 3 4 Whitelist SARC-US 21 0.62 0.13 0 0 0.48 1 Linked to high confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo With other complex events 11 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 18 4330785 61517858 1 9 229 1 1 0 0 7 0.57 0.14 6 0 0 6 6 6 6 6 6 27.48 9.87 90.1 1 2 3 Whitelist SARC-US 3 0.85 0.34 0 0 0.64 1 Linked to low confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo Canonical without polyploidization 11 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 19 11199742 42888829 1 5 229 3 0 0 0 2 0.03 0.23 4 0 0 4 3 4 6 3 3 27.48 41.3 51.42 0 2 0 Whitelist SARC-US 0.62 0.46 0 0 0.33 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 8 0.02 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 20 13806817 14149323 1 1 229 0 1 0 0 0 0.39 0.25 1 NA NA NA NA NA NA NA NA 27.48 0 99.01 0 2 NA Whitelist SARC-US 0.62 0.49 NA NA 0.59 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 2 0 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 21 14637168 34593655 9 14 229 1 1 4 3 5 0.39 0 16 0 0 16 16 16 16 16 16 27.48 25.22 52.13 0 1 2 Whitelist SARC-US 17 0.81 0 0 0 0.59 1 High confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo Canonical without polyploidization 23 0.05 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 22 19814411 20089451 2 2 229 0 0 1 1 0 0.57 1 2 NA 0 NA NA NA NA NA NA 27.48 0.5 99.5 0 1 2 Whitelist SARC-US 0.68 1 NA 0 0.64 1 No SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo NA 4 0.01 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::7f9031da-124a-4a38-83e6-878a50e58c24 X 8748611 107791713 1 8 229 3 2 0 0 3 0.14 0.65 7 0 0 7 5 7 7 5 5 27.48 26.04 73.74 0 2 1 Whitelist SARC-US 3 0.68 0.86 0 0 0.59 1 Linked to low confidence SARC-US 7f9031da-124a-4a38-83e6-878a50e58c24 SARC 0.86 1.89 SoftTissue-Leiomyo Canonical without polyploidization 13 0.03 NA 2 SARC-US DO220122 TCGA-FX-A3RE 7f9031da-124a-4a38-83e6-878a50e58c24 female alive C56.9 NA NA 2 NA Included SoftTissue-Leiomyo SARC US 0 0.07 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 1 157434186 248437131 179 598 2036 52 35 44 48 419 0.31 0 240 0 0 240 9 13 253 9 14 62.39 53.24 43.37 37 2 3 Whitelist SARC-US 10_11_12_13_16_3_6_X 0.67 0 0 0 0.59 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 777 0.19 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 2 117676635 243016298 6 10 2036 1 1 2 2 4 0.88 0 18 0 0 18 14 14 37 20 20 62.39 23.73 76.19 0 2 3 Whitelist SARC-US 8 0.68 0 0 0 0.91 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc Canonical without polyploidization 16 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 3 8155512 83721537 29 55 2036 8 5 8 8 26 0.82 0.49 32 0 0 32 12 12 57 12 13 62.39 14.68 82.15 3 2 3 Whitelist SARC-US 11_16_6_X 0.92 0.73 0 0 0.86 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 84 0.02 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 4 637238 140609577 1 8 2036 2 0 0 1 5 0.3 0 14 0 0 14 4 9 15 5 10 62.39 97.38 0.14 0 3 4 Whitelist SARC-US 13 0.62 0 0 0 0.59 1 Linked to high confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 11 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 5 13726553 174060331 25 105 2036 8 5 4 8 80 0.56 0.36 97 0 0 97 7 12 105 7 12 62.39 93.66 3.66 8 3 4 Whitelist SARC-US 12_9 0.68 0.61 0 0 0.64 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 130 0.03 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 6 1095728 156611836 93 148 2036 23 26 19 25 55 0.74 0 135 0 0 135 20 29 137 20 20 62.39 76.51 23.23 9 4 3 Whitelist SARC-US 12_13_14_16_3_X 0.62 0.02 0 0 0.82 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 241 0.06 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 7 9379433 133023159 7 12 2036 1 3 1 2 5 0.67 0 21 0 0 21 10 11 23 10 11 62.39 81.77 18.01 3 3 2 Whitelist SARC-US 16_9 0.68 0 0 0 0.74 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 19 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 8 80454829 117232184 8 8 2036 2 1 1 4 0 0.39 0 10 0 0 10 7 10 49 10 10 62.39 68.03 31.96 0 3 2 Whitelist SARC-US 0.62 0 0 0 0.59 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc Canonical without polyploidization 16 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 9 1604237 38289692 12 76 2036 6 4 2 0 64 0.08 0.33 68 0 0 68 7 15 74 7 15 62.39 88.75 11.14 2 4 3 Whitelist SARC-US 10_14_16_19_5_7 0.93 0.58 0 0 0.48 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 88 0.02 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 10 3043555 124930157 1 38 2036 2 0 0 1 35 0.3 0 11 0 0 11 8 11 13 8 8 62.39 43.1 53.27 0 2 3 Whitelist SARC-US 12_19_9 0.95 0 0 0 0.59 1 Linked to high confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc Canonical without polyploidization 41 0.01 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 11 20106252 97980852 26 67 2036 7 5 7 7 41 0.93 0.46 62 0 0 62 23 39 76 23 25 62.39 69.42 30.3 0 2 3 Whitelist SARC-US 12_3_8 1 0.7 0 0 0.95 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 93 0.02 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 12 27498321 130397265 409 913 2036 97 106 101 105 504 0.92 0 461 0 0 461 11 14 465 11 14 62.39 71.51 24.81 31 3 4 Whitelist SARC-US 10_11_13_15_16_20_3_5_6_8_X 0.98 0 0 0 0.94 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 1322 0.32 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 13 56101373 108997401 33 55 2036 7 7 9 10 22 0.85 0.95 63 0 0 63 12 28 65 12 13 62.39 53.53 46.47 2 2 1 Whitelist SARC-US 12_19_4_6 0.82 1 0 0 0.89 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 88 0.02 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 14 21880534 104480456 20 86 2036 4 7 5 4 66 0.75 0 70 0 0 70 7 19 75 7 21 62.39 25.22 74.72 7 4 3 Whitelist SARC-US 5_6_9 0.62 0 0 0 0.83 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 106 0.03 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 15 22917198 97545746 35 58 2036 10 8 9 8 23 0.96 0.31 69 0 0 69 10 14 70 10 14 62.39 81.25 13.87 3 3 4 Whitelist SARC-US 16_19_X 0.68 0.56 0 0 0.97 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 93 0.02 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 16 261147 88704041 19 118 2036 6 3 3 7 99 0.44 0 98 0 0 98 11 12 103 11 11 62.39 48.22 51.42 2 2 3 Whitelist SARC-US 12_15_19_6_7_8_9_X 0.68 0 0 0 0.64 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 137 0.03 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 17 75392864 75521654 1 1 2036 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 4 3 3 62.39 78.61 21.36 0 1 2 Whitelist SARC-US 0.62 0 0 NA 0.59 1 No SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc NA 2 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 18 73920836 76140161 2 14 2036 0 0 2 0 12 0.11 0.07 9 0 0 9 3 3 44 6 10 62.39 65.29 34.31 0 7 10 Whitelist SARC-US 12_3_X 0.9 0.22 0 0 0.48 1 Linked to high confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 16 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 19 5386099 49674392 10 41 2036 3 2 2 3 31 0.94 0.01 46 0 0 46 19 19 54 19 19 62.39 62.61 29.66 1 2 3 Whitelist SARC-US 10_15_16_9 0.68 0.03 0 0 0.96 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 51 0.01 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 20 37676020 59930522 3 6 2036 1 1 1 0 3 0.8 0 11 0 0 11 9 11 12 9 9 62.39 98.92 0.1 0 3 4 Whitelist SARC-US 12 0.93 0 0 0 0.84 1 Linked to high confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc After polyploidization 9 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 21 26409407 47988256 1 3 2036 0 0 0 2 1 0.11 0 5 0 0 5 4 5 7 4 4 62.39 47.2 29.99 0 1 2 Whitelist SARC-US 0.41 0 0 0 0.48 1 No SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc NA 5 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 22 NA NA 0 0 2036 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc NA 0 0 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::854e42bc-95b2-4b77-a4b2-ffbd6c28b281 X 70422197 98898338 23 94 2036 3 8 8 4 71 0.31 0.07 28 0 0 28 7 13 34 7 8 62.39 93.17 6.8 2 1 3 Whitelist SARC-US 12_15_16_6_8 0.62 0.2 0 0 0.59 1 High confidence SARC-US 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 SARC 0.84 2.88 SoftTissue-Liposarc With other complex events 117 0.03 NA 71 SARC-US DO219949 TCGA-DX-A1L0 854e42bc-95b2-4b77-a4b2-ffbd6c28b281 male deceased C48.0 NA 564 NA NA Included SoftTissue-Liposarc SARC US 1 18.55 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 1 NA NA 0 0 38 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0.93 NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 2 NA NA 0 0 38 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.62 NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 3 12932880 76585301 1 4 38 1 1 0 0 2 0.57 0 4 0 0 4 4 4 8 5 8 68.03 16.28 83.68 0 2 3 Whitelist SARC-US 0.68 0.02 0 0 0.64 1 Linked to high confidence SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo Canonical without polyploidization 6 0.08 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 4 NA NA 0 0 38 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0.91 NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 5 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 6 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 9 1318657 44240245 17 20 38 3 3 5 6 3 0.66 0 29 0 0 29 9 22 31 9 23 68.03 46.23 53.07 13 3 1 Whitelist SARC-US 3 0.62 0 0 0 0.74 1 High confidence SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo With other complex events 37 0.49 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 10 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 11 38435903 87308682 1 3 38 0 0 1 0 2 0.39 0.26 5 NA 0 5 5 5 8 8 8 68.03 36.83 62.75 0 2 3 Whitelist SARC-US 0.87 0.5 NA 0 0.59 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 4 0.05 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 12 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 13 NA NA 0 0 38 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.34 NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 14 94232288 94649097 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 68.03 98.15 0.94 0 2 3 Whitelist SARC-US 0.62 1 NA NA 0.59 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 2 0.03 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 16 47213854 47903193 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 7 4 4 68.03 53.11 46.88 0 2 3 Whitelist SARC-US 0.62 1 NA NA 0.59 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 2 0.03 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 18 165557 74689544 1 4 38 2 0 2 0 0 0.26 0.02 5 0 0 5 3 5 6 4 4 68.03 99.96 0 1 4 3 Whitelist SARC-US 0.62 0.08 0 0 0.59 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 8 0.11 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8654c2b5-27d7-43c5-9a39-7fdefd7a0324 X NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 SARC 0.94 2.94 SoftTissue-Leiomyo NA 0 0 NA 4 SARC-US DO220221 TCGA-MO-A47R 8654c2b5-27d7-43c5-9a39-7fdefd7a0324 female alive C48.0 NA NA 3 NA Included SoftTissue-Leiomyo SARC US 0 0.1 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 1 1201892 21330306 6 6 782 1 2 1 2 0 0.88 0 9 0 0 9 5 7 20 14 14 30.69 38.52 61.48 0 1 2 Whitelist SARC-US 0.93 0 0 0 0.91 1 Low confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 12 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 2 43611222 48288069 2 3 782 0 1 0 1 1 0.57 0 3 0 0 NA NA NA 14 6 8 30.69 30.65 69.24 0 2 3 Whitelist SARC-US 0.87 0 0 0 0.64 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 5 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 3 190977465 197689209 17 17 782 4 8 2 3 0 0.18 0 23 0 0 23 4 7 30 8 10 30.69 14.42 85.45 0 1 3 Whitelist SARC-US 0.62 0 0 0 0.59 1 Low confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 34 0.02 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 4 88570552 123136247 24 57 782 6 7 5 6 33 0.95 0 46 0 0 46 9 13 79 12 18 30.69 21.8 75.51 2 3 2 Whitelist SARC-US 12_6 0.8 0 0 0 0.97 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 81 0.05 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 5 71550993 162747485 25 44 782 4 6 6 9 19 0.56 0.66 29 0 0 29 11 19 35 12 20 30.69 37.24 62.62 1 1 2 Whitelist SARC-US 8 0.85 0.87 0 0 0.64 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 69 0.04 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 6 9401122 151337809 20 91 782 9 3 3 5 71 0.19 0 88 0 0 88 8 20 92 11 11 30.69 21.57 78.21 0 2 3 Whitelist SARC-US 12_4 0.62 0 0 0 0.59 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 111 0.07 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 7 5731429 24048349 1 5 782 1 0 0 1 3 0.57 0 4 0 0 4 3 4 7 3 3 30.69 0.1 99.68 0 2 1 Whitelist SARC-US 12 0.68 0 0 0 0.64 1 Linked to high confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc Canonical without polyploidization 7 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 8 65806479 108515177 7 29 782 2 1 2 2 22 0.93 0.29 15 0 0 15 7 9 23 7 13 30.69 35.33 64.56 1 1 2 Whitelist SARC-US 5 0.88 0.54 0 0 0.95 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 36 0.02 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 9 13132039 27112660 12 19 782 3 4 2 3 7 0.88 0.36 22 0 0 22 11 18 23 11 11 30.69 8.11 91.71 2 2 3 Whitelist SARC-US 12 0.87 0.61 0 0 0.91 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 31 0.02 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 10 5326810 15068387 3 6 782 1 0 1 1 3 0.8 0 11 0 0 11 6 11 18 7 15 30.69 2.32 97.52 0 2 4 Whitelist SARC-US 0.93 0 0 0 0.84 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 9 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 11 14830528 20532174 3 3 782 0 0 2 1 0 0.3 0 5 0 0 5 5 5 23 10 13 30.69 50.2 49.24 0 2 3 Whitelist SARC-US 0.62 0.01 0 0 0.59 1 Linked to high confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc Canonical without polyploidization 6 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 12 1089811 133349179 334 459 782 84 84 85 81 125 0.99 0 580 0 0 580 6 7 582 6 7 30.69 51.17 48.45 45 2 3 Whitelist SARC-US 11_6_9 0.89 0 0 0 1 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 793 0.51 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 13 100098950 108510778 8 8 782 2 3 2 1 0 0.8 0 12 0 0 12 7 12 15 7 7 30.69 14.44 85.46 0 2 1 Whitelist SARC-US 0.87 0.01 0 0 0.84 1 High confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 16 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 14 106999305 107046286 1 1 782 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 30.69 91.2 8.51 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 15 22897164 23003312 1 1 782 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 30.69 0.1 99.4 0 1 2 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 16 4677930 10513806 1 2 782 0 0 0 1 1 0.39 0 7 0.2 NA 7 3 5 13 4 4 30.69 66.26 33.48 0 4 7 Whitelist SARC-US 0.68 0 0.2 NA 0.59 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 3 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 17 5483205 17481065 6 6 782 2 1 1 2 0 0.88 0.08 11 0 0 11 4 7 21 6 8 30.69 9.57 90.43 0 2 3 Whitelist SARC-US 0.93 0.22 0 0 0.91 1 Low confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 12 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 18 43622824 72635271 6 6 782 1 0 2 3 0 0.34 0 8 0 0 8 5 8 11 6 6 30.69 22.01 77.95 0 2 1 Whitelist SARC-US 0.62 0 0 0 0.59 1 Low confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc Canonical without polyploidization 12 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 19 378237 750693 1 4 782 0 0 0 1 3 0.39 0.8 3 0.09 0 NA NA NA 15 6 6 30.69 27.55 72.27 0 3 2 Whitelist SARC-US 12 1 0.95 0.09 0 0.59 1 Linked to high confidence SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc With other complex events 5 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 20 61869240 62949921 2 2 782 0 1 1 0 0 0.57 0 2 NA 0 NA NA NA 5 3 3 30.69 16.22 83.61 0 4 5 Whitelist SARC-US 0.68 0 NA 0 0.64 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 4 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 21 47480023 48061997 5 5 782 1 1 1 2 0 0.9 0.75 3 0 0 NA NA NA 5 4 5 30.69 70.33 0 0 0 1 Whitelist SARC-US 0.93 0.91 0 0 0.92 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 10 0.01 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 22 NA NA 0 0 782 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::8f3f6f7c-4b50-467e-a6e8-d836735913f6 X 76520987 104396846 2 3 782 1 1 0 0 1 0.57 0 2 0 0 NA NA NA 9 3 3 30.69 100 0 0 0 1 Whitelist SARC-US 0.87 0 0 0 0.64 1 No SARC-US 8f3f6f7c-4b50-467e-a6e8-d836735913f6 SARC 0.62 2.12 SoftTissue-Liposarc NA 5 0 NA 49 SARC-US DO219972 TCGA-DX-A3U5 8f3f6f7c-4b50-467e-a6e8-d836735913f6 male alive C48.0 NA NA 458 NA Included SoftTissue-Liposarc SARC US 0 15.07 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 1 59218908 173348092 18 121 498 4 4 6 4 103 0.88 0 75 0 0 75 3 4 75 3 4 4.79 2.96 97.04 7 49 14 Whitelist SARC-US 5 0.8 0 0 0 0.91 1 Linked to low confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 139 0.14 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 2 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 3 115920475 116709296 1 3 498 2 0 1 0 0 0.3 0 4 0 0 4 4 4 5 5 5 4.79 0.26 99.6 0 1 2 Whitelist SARC-US 0.62 0 0 0 0.59 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 6 0.01 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 4 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 5 274679 32089188 19 73 498 4 3 7 5 54 0.61 0 50 0 0 50 5 5 61 5 11 4.79 24.02 73.3 12 7 3 Whitelist SARC-US 0.98 0 0 0 0.68 1 Low confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 92 0.09 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 6 940970 13889214 3 17 498 0 1 1 1 14 0.8 0.78 11 0 0 11 4 4 20 5 7 4.79 5.23 94.62 0 2 3 Whitelist SARC-US 5 0.62 0.93 0 0 0.84 1 Linked to low confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 20 0.02 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 7 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 8 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 9 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 10 NA NA 0 0 498 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 11 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 12 18468583 117642876 167 330 498 39 45 36 47 163 0.6 0 101 0 0 101 4 4 102 4 5 4.79 6.99 92.93 8 2 49 Whitelist SARC-US 0.62 0 0 0 0.67 1 High confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 497 0.5 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 13 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 14 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 15 66780674 67569135 1 8 498 0 0 1 0 7 0.39 0 1 0 0 NA NA NA 12 0 3 4.79 2.2 97.8 0 18 NA Whitelist SARC-US 1 0 0 0 0.59 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 9 0.01 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 16 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 17 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 18 20983183 30290774 9 55 498 2 2 3 2 46 0.95 0 30 0 0 30 4 6 38 4 6 4.79 95.35 0 3 10 5 Whitelist SARC-US 5 0.73 0 0 0 0.97 1 Low confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 64 0.06 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 19 4947957 37334626 1 20 498 1 0 1 0 18 0.57 0 6 0 0 6 0 3 6 0 0 4.79 0.8 99.03 0 2 20 Whitelist SARC-US 5 0.68 0 0 0 0.64 1 Linked to low confidence SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc With other complex events 22 0.02 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 20 14808526 14945169 1 1 498 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 4.79 0 99.01 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 21 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec 22 NA NA 0 0 498 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9517413b-b5b8-4130-8ba1-d86d44abe2ec X 131073498 133985704 1 3 498 0 0 0 1 2 0.39 0 3 NA 0 NA NA NA 4 0 0 4.79 0.03 99.75 0 2 15 Whitelist SARC-US 0.62 0 NA 0 0.59 1 No SARC-US 9517413b-b5b8-4130-8ba1-d86d44abe2ec SARC 0.6 2.24 SoftTissue-Liposarc NA 4 0 NA 49 SARC-US DO219952 TCGA-DX-A1L3 9517413b-b5b8-4130-8ba1-d86d44abe2ec female alive C48.0 NA NA 960 NA Included SoftTissue-Liposarc SARC US 0 31.58 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 1 35240616 35322900 2 2 240 0 0 1 1 0 0.57 0.81 2 0 0 NA NA NA 9 5 8 56.87 79.23 11.66 0 4 5 Whitelist SARC-US 0.68 0.96 0 0 0.64 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 4 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 2 111886181 118462097 3 4 240 1 1 1 0 1 0.8 0.56 6 0 0 6 4 6 22 10 10 56.87 38.81 61.09 0 2 3 Whitelist SARC-US 0.68 0.79 0 0 0.84 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 7 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 3 9549122 195919822 18 24 240 8 3 1 6 6 0.09 0 41 0 0 41 7 15 42 7 15 56.87 81.29 15.46 1 1 2 Whitelist SARC-US 18 0.62 0.01 0 0 0.48 0 High confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo With other complex events 42 0.09 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 4 26976269 129875330 1 4 240 1 2 0 0 1 0.3 0 4 0 0 4 3 4 5 3 3 56.87 0.48 99.5 1 2 3 Whitelist SARC-US 0.68 0.01 0 0 0.59 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 7 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 5 65969433 148959194 1 2 240 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 56.87 99.51 0.36 0 3 2 Whitelist SARC-US 0.68 0 0 0 0.64 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 4 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 6 15833394 154914424 1 10 240 0 2 1 1 6 0.57 0.59 12 0 0 12 4 6 14 4 7 56.87 9.09 90.76 0 2 4 Whitelist SARC-US 0.68 0.81 0 0 0.64 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 14 0.03 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 7 78585846 144766064 4 12 240 0 1 3 4 4 0.17 0 20 0 0 20 7 12 27 7 7 56.87 80.34 19.44 8 2 3 Whitelist SARC-US 0.54 0.02 0 0 0.59 0 Linked to high confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo With other complex events 20 0.04 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 False positive; manually removed SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 8 1764367 56585401 2 9 240 3 2 0 1 3 0.34 0.01 18 0 0 18 4 8 30 4 6 56.87 73.28 26.67 10 2 3 Whitelist SARC-US 0.62 0.04 0 0 0.59 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 15 0.03 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 9 16849804 128994167 1 2 240 2 0 0 0 0 0.11 0.01 7 NA 0 7 5 7 8 6 6 56.87 99.29 0 0 3 4 Whitelist SARC-US 0.54 0.04 NA 0 0.48 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 4 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 10 58572635 90173011 1 9 240 5 0 1 0 3 0.01 1 10 0 0 10 5 5 11 5 5 56.87 68.32 28.25 30 1 0 Whitelist SARC-US 0.62 1 0 0 0.19 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 15 0.03 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 11 46828646 118832754 1 5 240 0 4 0 0 1 0.01 0.13 5 0 0 5 3 3 6 3 4 56.87 47.76 51.68 0 4 2 Whitelist SARC-US 0.45 0.31 0 0 0.16 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 9 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 12 30288936 88408604 1 6 240 0 4 0 0 2 0.01 0.76 2 0 0 NA NA NA 9 6 9 56.87 96.21 0 1 3 4 Whitelist SARC-US 13 0.25 0.92 0 0 0.16 0 Linked to high confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo With other complex events 10 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 13 62209862 72754123 6 6 240 1 1 2 2 0 0.88 0 7 0 0 7 7 7 23 10 10 56.87 71.21 14.64 0 4 5 Whitelist SARC-US 0.93 0 0 0 0.91 0 High confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo After polyploidization 12 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 14 59285735 59359866 1 1 240 0 1 0 0 0 0.39 0.46 2 0 NA NA NA NA 9 4 4 56.87 18.4 65.69 0 2 3 Whitelist SARC-US 0.62 0.7 0 NA 0.59 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 2 0 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 15 NA NA 0 0 240 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 4 5 0 0 0 0 0 0 Whitelist SARC-US NA 1 0 NA NA 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 16 1152709 87149186 1 5 240 0 3 0 1 1 0.11 0.84 6 0.22 0.02 6 4 6 7 4 4 56.87 15.11 76.2 0 2 4 Whitelist SARC-US 0.62 0.98 0.22 0.02 0.48 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 9 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 17 21465665 80272474 1 6 240 1 0 1 1 3 0.8 0.31 8 0 0 8 3 3 12 3 3 56.87 53.19 41.78 0 3 2 Whitelist SARC-US 0.68 0.57 0 0 0.84 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 9 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 18 25133083 67867958 9 13 240 3 0 2 4 4 0.27 0 32 0 0 32 6 8 55 6 13 56.87 93.89 1.33 15 6 4 Whitelist SARC-US 0.62 0 0 0 0.59 0 Low confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo With other complex events 22 0.05 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 19 23587918 34658857 2 2 240 1 0 0 1 0 0.57 1 2 0 0 NA NA NA 9 4 4 56.87 89.15 10.68 0 3 4 Whitelist SARC-US 0.68 1 0 0 0.64 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 4 0.01 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 20 49260679 49366782 1 1 240 0 1 0 0 0 0.39 0.26 2 NA NA NA NA NA 5 4 5 56.87 40.85 52.04 0 2 3 Whitelist SARC-US 0.62 0.5 NA NA 0.59 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 2 0 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 21 10931511 44826284 13 18 240 4 5 1 3 5 0.44 0 34 0 0 34 12 15 35 12 15 56.87 77.31 0.04 2 1 4 Whitelist SARC-US 7 0.68 0 0 0 0.64 0 High confidence SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo With other complex events 31 0.06 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b 22 19876503 19922200 1 1 240 0 1 0 0 0 0.39 0.22 1 0 NA NA NA NA NA NA NA 56.87 65.11 11.11 0 4 NA Whitelist SARC-US 0.62 0.45 0 NA 0.59 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 2 0 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::9c9b53e5-cdbe-4510-a839-4a3b5039681b X 81810647 128409105 2 5 240 1 1 1 1 1 1 0.66 6 0 0 6 3 5 8 3 6 56.87 4.17 92.44 6 2 1 Whitelist SARC-US 0.93 0.87 0 0 1 0 No SARC-US 9c9b53e5-cdbe-4510-a839-4a3b5039681b SARC 0.91 2.73 SoftTissue-Leiomyo NA 9 0.02 frameshift_deletion,17_7577153_-_C,CN:2 3 SARC-US DO220138 TCGA-HB-A43Z 9c9b53e5-cdbe-4510-a839-4a3b5039681b female alive C55 NA NA 126 NA Included SoftTissue-Leiomyo SARC US 0 4.14 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 1 175909202 201271527 19 21 895 3 5 6 5 2 0.8 0 15 0 0 15 7 7 27 8 10 88.81 100 0 5 6 7 Whitelist SARC-US X 0.95 0 0 0 0.84 0 High confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 40 0.02 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 2 192986993 198091040 3 5 895 1 0 1 1 2 0.8 0 1 0 0 NA NA NA 22 6 8 88.81 97.32 0 0 6 NA Whitelist SARC-US 0.93 0 0 0 0.84 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 8 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 3 16208743 73683673 16 24 895 2 4 6 4 8 0.57 0.08 13 0 0 13 6 11 26 6 11 88.81 96.84 0 11 6 7 Whitelist SARC-US 9 0.87 0.22 0 0 0.64 0 Low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 40 0.02 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 4 25270247 161896891 1 9 895 3 1 1 0 4 0.28 0 17 0 0 17 5 5 19 5 5 88.81 97.46 0 0 4 6 Whitelist SARC-US 9 0.62 0 0 0 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 14 0.01 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 5 115325452 165756524 3 20 895 2 1 0 0 17 0.3 0.04 13 0 0 13 3 5 26 6 6 88.81 97.24 0.08 0 8 9 Whitelist SARC-US 15_7_X 0.96 0.13 0 0 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 23 0.01 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 6 121478880 150364308 12 44 895 8 2 2 0 32 0.01 0 22 0 0 22 10 10 47 10 10 88.81 99.83 0 3 4 6 Whitelist SARC-US 13_3_7 0.46 0 0 0 0.16 0 Linked to low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 56 0.03 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 7 2825814 148640816 1 72 895 3 2 0 2 65 0.44 0 43 0 0 43 5 16 44 6 6 88.81 97.03 0 6 6 7 Whitelist SARC-US 13_15_3_6 1 0.01 0 0 0.64 0 Linked to low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 79 0.04 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 8 NA NA 0 0 895 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 0 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 9 1073973 27003044 4 19 895 0 3 0 1 15 0.11 0.26 20 0 0 20 6 6 34 6 6 88.81 99.3 0 7 9 6 Whitelist SARC-US 3_4 0.62 0.5 0 0 0.48 0 Linked to low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 23 0.01 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 10 60031702 114867251 1 2 895 1 1 0 0 0 0.57 0 3 0 0 NA NA NA 7 3 5 88.81 96.55 0 0 6 5 Whitelist SARC-US 0.68 0 0 0 0.64 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 4 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 11 577623 86983176 1 45 895 4 0 2 1 38 0.17 0.47 13 0 0 13 7 7 15 8 8 88.81 96.61 0 0 5 4 Whitelist SARC-US 0.92 0.72 0 0 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 52 0.03 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 12 2032836 97098237 324 537 895 98 102 65 59 213 0 0 284 0 0 284 3 4 285 3 4 88.81 99.76 0.15 37 4 49 Whitelist SARC-US 11_13_15_3_7 0.18 0 0 0 0.03 0 Linked to low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 861 0.48 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 13 65093605 113188518 7 54 895 3 3 0 1 47 0.28 0 41 0 0 41 5 6 46 5 5 88.81 94.28 5.66 1 6 4 Whitelist SARC-US 1_15_3_6_7_X 1 0 0 0 0.59 0 Low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 61 0.03 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 14 21505504 97129454 1 2 895 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 8 8 8 88.81 84.09 0 0 4 5 Whitelist SARC-US 0.54 0 NA 0 0.48 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 4 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 15 77063545 87618666 2 24 895 1 0 2 3 18 0.34 0.22 15 0 0 15 7 7 19 7 8 88.81 99.89 0 0 6 7 Whitelist SARC-US 13_7_X 0.76 0.45 0 0 0.59 0 Linked to low confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc With other complex events 30 0.02 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 16 48588543 49184184 1 33 895 0 0 0 1 32 0.39 0 5 0 0 5 0 3 16 4 4 88.81 95.53 0 0 6 138 Whitelist SARC-US 7 0.57 0 0 0 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 34 0.02 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 17 29483275 44260600 1 2 895 2 0 0 0 0 0.11 0 1 0.06 0 NA NA NA 4 3 3 88.81 99.98 0 0 4 NA Whitelist SARC-US 0.54 0 0.06 0 0.48 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 4 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 18 348753 78017130 1 6 895 2 0 1 0 3 0.3 0 8 0 0 8 0 3 9 3 4 88.81 95.25 0 0 6 4 Whitelist SARC-US 6 0.68 0 0 0 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 9 0.01 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 19 30211725 32009090 2 3 895 1 0 0 1 1 0.57 0.81 6 0 0 6 0 4 18 4 4 88.81 92.29 0 0 5 6 Whitelist SARC-US 0.87 0.96 0 0 0.64 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 5 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 20 56888654 56926751 1 1 895 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 88.81 93.04 0 0 4 7 Whitelist SARC-US 0.62 0 NA NA 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 21 32719430 32885830 1 1 895 1 0 0 0 0 0.39 0.17 1 0 NA NA NA NA NA NA NA 88.81 77.55 0 0 4 NA Whitelist SARC-US 0.62 0.38 0 NA 0.59 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 2 0 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e 22 47749290 49560239 2 15 895 0 0 1 1 13 0.57 0.03 7 0 0 7 0 3 9 0 3 88.81 88.89 0 0 5 7 Whitelist SARC-US 11 0.68 0.11 0 0 0.64 0 No SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc NA 17 0.01 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 SARC-US::b5f27002-4277-418d-90b0-cc5a2742692e X 115283407 149711207 21 31 895 4 8 5 4 10 0.56 0 8 0 0 8 8 8 12 9 9 88.81 0.15 99.62 1 0 2 Whitelist SARC-US 0.87 0 0 0 0.64 0 Linked to high confidence SARC-US b5f27002-4277-418d-90b0-cc5a2742692e SARC 0.87 6.21 SoftTissue-Liposarc Canonical without polyploidization 52 0.03 NA 49 SARC-US DO219954 TCGA-DX-A23R b5f27002-4277-418d-90b0-cc5a2742692e female alive C48.0 NA NA 2271 NA Included SoftTissue-Liposarc SARC US 0 74.7 False positive; manually removed SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 1 116083242 201885271 1 7 215 0 4 0 0 3 0.01 0.16 11 0 0 11 4 9 17 5 6 64.06 96.97 0 0 4 3 Whitelist SARC-US 0.47 0.37 0 0 0.16 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 11 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 2 100231526 114202403 8 13 215 2 2 2 2 5 1 0 18 0 0 18 3 5 40 5 6 64.06 99.82 0.07 0 7 8 Whitelist SARC-US 0.62 0 0 0 1 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 21 0.05 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 3 138369667 192817448 15 25 215 3 1 6 5 10 0.27 0 34 0 0 34 5 7 43 5 7 64.06 46.87 49.96 22 8 5 Whitelist SARC-US 6 0.62 0 0 0 0.59 1 Low confidence SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo With other complex events 40 0.09 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 4 98779288 186523930 1 2 215 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA 5 5 5 64.06 1.3 98.67 0 2 3 Whitelist SARC-US 0.54 0 NA 0 0.48 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 5 24468403 175038427 1 8 215 1 3 0 0 4 0.11 0.26 10 0 0 10 5 8 13 5 8 64.06 99.86 0 0 3 4 Whitelist SARC-US 3 0.54 0.5 0 0 0.48 1 Linked to low confidence SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo With other complex events 12 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 6 18987971 150829168 1 12 215 0 6 0 1 5 0 0.56 18 0 0 18 8 11 21 8 12 64.06 99.86 0 0 4 6 Whitelist SARC-US 3 0.25 0.79 0 0 0.09 1 Linked to low confidence SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo With other complex events 19 0.04 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 7 48627286 110291519 1 9 215 2 0 1 0 6 0.3 0.88 6 0 0 6 3 5 10 3 8 64.06 43.7 56.08 1 3 5 Whitelist SARC-US 0.62 1 0 0 0.59 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 12 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 8 55068041 119303696 1 3 215 1 2 0 0 0 0.3 0.01 6 0 0 6 3 6 7 3 7 64.06 99.99 0 0 4 6 Whitelist SARC-US 0.62 0.04 0 0 0.59 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 6 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 9 21318868 22563475 1 1 215 1 0 0 0 0 0.39 0.86 2 0 NA NA NA NA 7 3 3 64.06 3.35 94.09 0 0 2 Whitelist SARC-US 0.62 0.99 0 NA 0.59 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 10 32651421 125302235 21 22 215 6 7 3 5 1 0.64 0 44 0 0 44 11 16 45 11 11 64.06 45.17 51.11 7 3 4 Whitelist SARC-US 0.76 0 0 0 0.72 1 High confidence SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo With other complex events 43 0.1 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 11 17470648 86105125 1 4 215 1 3 0 0 0 0.11 0.05 6 0 0 6 4 6 7 5 7 64.06 38.03 61.41 0 2 3 Whitelist SARC-US 0.54 0.17 0 0 0.48 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 8 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 12 23124956 23636991 4 4 215 1 1 1 1 0 1 0.52 3 0 0 NA NA NA 14 3 4 64.06 99.98 0 1 4 6 Whitelist SARC-US 1 0.76 0 0 1 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 8 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 13 56845930 56878831 1 1 215 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 64.06 100 0 0 3 4 Whitelist SARC-US 0.62 0.04 NA NA 0.59 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 14 33454785 34024859 2 2 215 2 0 0 0 0 0.11 0.84 4 0 0 4 0 3 12 4 4 64.06 84 0.09 0 4 5 Whitelist SARC-US 0.54 0.98 0 0 0.48 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 15 77777195 90845682 1 2 215 0 2 0 0 0 0.11 0.67 4 0 0 4 3 4 12 3 6 64.06 38.52 56.6 0 3 4 Whitelist SARC-US 0.54 0.88 0 0 0.48 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 16 76492255 85094905 5 6 215 1 1 2 1 1 0.9 0 3 0 0 NA NA NA 12 5 9 64.06 98.8 0 3 3 4 Whitelist SARC-US 0.93 0 0 0 0.92 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 11 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 17 11066190 54474310 1 2 215 1 1 0 0 0 0.57 0.14 3 NA 0 NA NA NA 5 3 4 64.06 49.74 50.14 0 2 3 Whitelist SARC-US 0.68 0.33 NA 0 0.64 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 18 51228943 52324676 1 1 215 0 1 0 0 0 0.39 0.67 2 0.07 NA NA NA NA 7 3 4 64.06 87.51 7.84 0 4 5 Whitelist SARC-US 0.62 0.87 0.07 NA 0.59 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 2 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 19 8476880 45778200 1 14 215 0 1 1 0 12 0.57 0 8 0 0 8 4 5 9 4 4 64.06 85.66 13.9 0 4 3 Whitelist SARC-US 0.81 0 0 0 0.64 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 16 0.04 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 20 19518533 48665038 1 8 215 0 4 1 1 2 0.11 0.15 12 0 0 12 6 7 13 6 8 64.06 99.03 0 0 6 4 Whitelist SARC-US 0.54 0.35 0 0 0.48 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 14 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 21 NA NA 0 0 215 0 0 0 0 0 NA 0.75 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.92 NA NA NA 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 22 NA NA 0 0 215 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c20682a1-f340-430d-99f9-077fe093ed19 X 21219238 23515524 4 4 215 1 1 1 1 0 1 0.64 2 0 0 NA NA NA 12 9 9 64.06 13.84 82.69 0 2 3 Whitelist SARC-US 1 0.85 0 0 1 1 No SARC-US c20682a1-f340-430d-99f9-077fe093ed19 SARC 0.82 3.11 SoftTissue-Leiomyo NA 8 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:2 3 SARC-US DO220176 TCGA-IW-A3M5 c20682a1-f340-430d-99f9-077fe093ed19 female deceased C55 NA 180 NA NA Included SoftTissue-Leiomyo SARC US 1 5.92 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 1 174778472 248340863 1 1 67 1 0 0 0 0 0.39 1 1 0 NA NA NA NA 7 4 4 26.87 43.71 55.93 0 1 NA Whitelist SARC-US 0.62 1 0 NA 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 2 0.01 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 2 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 3 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 4 71927350 90588780 3 3 67 2 1 0 0 0 0.3 0.09 1 0 0 NA NA NA 4 4 4 26.87 19.81 80.17 0 2 NA Whitelist SARC-US 0.62 0.25 0 0 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 6 0.04 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 5 24856196 26905843 5 6 67 0 3 1 1 1 0.28 0 8 0 0 8 5 8 17 6 6 26.87 18.22 81.64 0 4 3 Whitelist SARC-US 0.68 0 0 0 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 11 0.08 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 6 35864666 35950639 1 2 67 2 0 0 0 0 0.11 0.44 1 NA 0 NA NA NA 5 5 5 26.87 33.24 63.94 0 1 NA Whitelist SARC-US 0.54 0.69 NA 0 0.48 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 4 0.03 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 7 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 8 121200452 121498965 1 1 67 1 0 0 0 0 0.39 0.16 2 0 NA NA NA NA 5 5 5 26.87 3.9 96.09 0 1 2 Whitelist SARC-US 0.62 0.36 0 NA 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 2 0.01 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 9 114751389 114908203 2 2 67 2 0 0 0 0 0.11 0.19 7 0 0 7 7 7 7 7 7 26.87 0.05 99.81 0 2 1 Whitelist SARC-US 0.54 0.41 0 0 0.48 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 4 0.03 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 10 88802 44531231 1 2 67 1 0 0 1 0 0.57 0.77 3 NA 0.04 NA NA NA NA NA NA 26.87 99.83 0 0 1 0 Whitelist SARC-US 0.68 0.93 NA 0.04 0.64 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 4 0.03 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 11 65343938 66094041 2 4 67 2 0 1 1 0 0.57 0.13 4 0 0 4 4 4 7 4 4 26.87 81.04 18.54 0 1 2 Whitelist SARC-US 0.68 0.32 0 0 0.64 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 8 0.06 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 12 102269616 103245093 1 2 67 0 0 1 0 1 0.39 0.01 1 0 0 NA NA NA NA NA NA 26.87 48.6 47.66 0 1 NA Whitelist SARC-US 0.54 0.06 0 0 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 3 0.02 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 13 48834786 89011804 2 5 67 0 0 1 1 3 0.57 0.01 6 0 0 6 3 6 7 3 3 26.87 99.92 0.08 0 1 0 Whitelist SARC-US 0.93 0.04 0 0 0.64 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 7 0.05 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 14 NA NA 0 0 67 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.9 NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 15 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 16 NA NA 0 0 67 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.9 NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 17 77012190 77235896 1 5 67 1 0 0 0 4 0.39 0 1 0 0 NA NA NA 6 4 5 26.87 30.27 64.47 0 1 NA Whitelist SARC-US 0.93 0 0 0 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 6 0.04 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 18 6710894 63973770 1 2 67 2 0 0 0 0 0.11 0.7 2 NA 0.04 NA NA NA NA NA NA 26.87 0.07 99.89 0 1 2 Whitelist SARC-US 0.54 0.9 NA 0.04 0.48 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 4 0.03 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 19 12011735 12184834 1 1 67 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 26.87 5.32 94.51 0 1 2 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 2 0.01 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 20 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 21 NA NA 0 0 67 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 22 NA NA 0 0 67 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.41 NA NA NA 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 0 0 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5b0e6be-48b5-40e5-9d90-f9112050aa88 X 149518820 149826307 1 1 67 1 0 0 0 0 0.39 0.78 2 NA NA NA NA NA NA NA NA 26.87 0.21 99.57 0 1 2 Whitelist SARC-US 0.62 0.93 NA NA 0.59 0 No SARC-US c5b0e6be-48b5-40e5-9d90-f9112050aa88 SARC 0.86 1.75 SoftTissue-Leiomyo NA 2 0.01 stopgain,17_7579415_T_C,CN:1 1 SARC-US DO220140 TCGA-HB-A5W3 c5b0e6be-48b5-40e5-9d90-f9112050aa88 female deceased C48.0 NA 384 NA NA Included SoftTissue-Leiomyo SARC US 1 12.63 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 1 75364477 217841881 1 3 38 0 2 0 0 1 0.11 0.54 5 0 0 5 3 5 7 4 4 49.84 44.99 55.01 0 3 2 Whitelist SARC-US 0.62 0.77 0 0 0.48 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 5 0.07 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 2 78082245 79341052 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 49.84 0 99.89 0 2 NA Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 2 0.03 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 3 74972905 161544567 3 3 38 0 1 1 1 0 0.8 0.05 5 0 0 5 5 5 7 7 7 49.84 69.22 30.66 3 3 2 Whitelist SARC-US 0.87 0.16 0 0 0.84 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 6 0.08 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 4 114355179 126300050 2 3 38 1 1 0 0 1 0.57 0.11 1 0 0 NA NA NA NA NA NA 49.84 0.01 99.58 0 2 NA Whitelist SARC-US 0.87 0.28 0 0 0.64 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 5 0.07 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 5 23747385 105896516 1 3 38 1 1 0 0 1 0.57 0.51 2 NA 0 NA NA NA NA NA NA 49.84 97.32 0 0 3 4 Whitelist SARC-US 0.62 0.76 NA 0 0.64 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 5 0.07 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 6 19330125 22605488 1 2 38 0 0 1 1 0 0.57 1 5 NA 0 5 5 5 7 7 7 49.84 9.62 90.23 0 2 1 Whitelist SARC-US 0.68 1 NA 0 0.64 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 4 0.05 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 9 32707997 35100144 1 1 38 1 0 0 0 0 0.39 0.66 2 NA NA NA NA NA 5 4 4 49.84 87.5 9.38 0 1 2 Whitelist SARC-US 0.62 0.87 NA NA 0.59 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 2 0.03 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 10 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 1 NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 11 10548215 22217918 3 3 38 1 0 1 1 0 0.8 0 2 0 0 NA NA NA NA NA NA 49.84 12.35 87.1 0 1 2 Whitelist SARC-US 0.87 0.01 0 0 0.84 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 6 0.08 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 12 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 13 42830835 83773584 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 49.84 35.55 64.45 0 1 2 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 2 0.03 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 16 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 18 NA NA 0 0 38 0 0 0 0 0 NA 0.02 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.08 0 NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 20 49962581 50124885 1 1 38 0 1 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 49.84 66.13 32.77 0 3 NA Whitelist SARC-US 0.62 0.42 NA NA 0.59 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 2 0.03 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 0 0 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::c5e23947-253b-40d2-916a-277b2a580be2 X 2798167 41040188 1 2 38 0 1 0 1 0 0.57 0.01 4 0.19 0.06 4 3 4 6 3 3 49.84 97.75 2 0 3 2 Whitelist SARC-US 0.68 0.05 0.19 0.06 0.64 0 No SARC-US c5e23947-253b-40d2-916a-277b2a580be2 SARC 0.92 2.44 SoftTissue-Leiomyo NA 4 0.05 frameshift_deletion,17_7574019_-_CT,CN:2 2 SARC-US DO220153 TCGA-IE-A4EI c5e23947-253b-40d2-916a-277b2a580be2 female alive C49.2 NA NA 272 NA Included SoftTissue-Leiomyo SARC US 0 8.95 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 1 194957916 205512857 1 2 595 0 0 1 0 1 0.39 0 3 NA NA NA NA NA 7 7 7 67.55 100 0 0 3 4 Whitelist SARC-US 0.68 0 NA NA 0.59 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 3 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 2 134109983 141125790 1 3 595 1 0 0 0 2 0.39 0 4 0 0 4 4 4 16 7 8 67.55 99.91 0 0 3 4 Whitelist SARC-US 0.87 0 0 0 0.59 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 4 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 3 116497225 116813984 1 2 595 2 0 0 0 0 0.11 0 4 0 0 4 4 4 12 7 7 67.55 46.62 50.3 0 1 2 Whitelist SARC-US 0.54 0 0 0 0.48 1 Linked to high confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc Canonical without polyploidization 4 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 4 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 5 40979 180658104 48 54 595 16 9 11 12 6 0.54 0 115 0 0 115 7 21 115 7 21 67.55 43.89 53.4 11 2 5 Whitelist SARC-US 12 0.71 0 0 0 0.64 1 High confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc With other complex events 102 0.09 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 6 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 7 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 8 30791212 101358676 35 43 595 6 10 8 11 8 0.64 0 49 0 0 49 7 18 53 7 18 67.55 53.25 46.74 9 3 4 Whitelist SARC-US 12 0.82 0.01 0 0 0.72 1 High confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc With other complex events 78 0.07 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 9 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 10 1693605 9839814 2 4 595 0 0 1 1 2 0.57 0 6 0 0 6 3 6 8 3 3 67.55 72.58 24.07 0 2 0 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 6 0.01 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 11 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 12 39672405 132182029 376 394 595 90 86 99 101 18 0.65 0 516 0 0 516 8 8 517 8 8 67.55 15.01 84.91 50 8 2 Whitelist SARC-US 5_8_13_19 0.68 0 0 0 0.73 1 High confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc With other complex events 770 0.65 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 13 23586259 110740999 1 7 595 1 0 1 0 5 0.57 0 10 0 0 10 6 10 12 8 8 67.55 41.49 58.51 0 3 2 Whitelist SARC-US 12 0.77 0.02 0 0 0.64 1 Linked to high confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc Canonical without polyploidization 9 0.01 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 14 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 15 22370209 52646685 12 13 595 3 5 3 1 1 0.45 0.26 21 0 0 21 4 10 27 6 10 67.55 91.65 8.23 0 2 4 Whitelist SARC-US 0.68 0.5 0 0 0.64 1 Low confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc With other complex events 25 0.02 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 16 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 17 66034439 66198645 1 1 595 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 4 4 4 67.55 99.98 0 0 3 4 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 2 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 18 24757962 25726038 1 1 595 1 0 0 0 0 0.39 0 1 NA NA NA NA NA 7 4 4 67.55 95.26 0.09 0 4 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 2 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 19 4529269 35019475 21 27 595 3 4 6 8 6 0.42 0 34 0 0 34 17 34 39 17 17 67.55 99.62 0 1 4 3 Whitelist SARC-US 3_12 0.62 0 0 0 0.63 1 High confidence SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc With other complex events 48 0.04 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 20 6570758 14642524 1 1 595 0 0 0 1 0 0.39 0 1 NA NA NA NA NA NA NA NA 67.55 99.01 0 0 4 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 2 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 21 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e 22 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::cd73a55f-03c1-4da0-9fa7-1ae4a263664e X NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US cd73a55f-03c1-4da0-9fa7-1ae4a263664e SARC 0.74 3.24 SoftTissue-Liposarc NA 0 0 NA 8 SARC-US DO219945 TCGA-DX-A1KW cd73a55f-03c1-4da0-9fa7-1ae4a263664e male alive C48.0 NA NA 62 NA Included SoftTissue-Liposarc SARC US 0 2.04 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 1 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 2 NA NA 0 0 27 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.9 NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 3 174783501 174987750 1 3 27 3 0 0 0 0 0.03 0.43 6 0 0 6 3 6 7 4 4 21.6 99.92 0.07 0 2 3 Whitelist SARC-US 0.41 0.68 0 0 0.33 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 6 0.11 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 4 170780394 186776060 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.6 8.37 91.63 0 1 2 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 5 443252 1295239 1 1 27 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.6 99.63 0.23 0 3 4 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 6 5722898 5735526 1 1 27 0 1 0 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 21.6 0 99.85 0 2 NA Whitelist SARC-US 0.62 0.08 0 NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 7 77152063 78196539 2 2 27 2 0 0 0 0 0.11 0.05 4 0 0 4 3 4 7 4 4 21.6 0.68 99.09 0 1 0 Whitelist SARC-US 0.54 0.17 0 0 0.48 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 4 0.07 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 8 112223880 112234230 1 1 27 0 1 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 21.6 99.99 0 0 3 4 Whitelist SARC-US 0.62 0.86 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 9 21862227 22045594 1 1 27 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.6 0.13 99.17 0 0 2 Whitelist SARC-US 0.62 1 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 10 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 11 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 12 91397533 91442737 1 1 27 0 1 0 0 0 0.39 0.36 1 NA 0 NA NA NA NA NA NA 21.6 0 99.92 0 2 NA Whitelist SARC-US 0.62 0.62 NA 0 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 13 NA NA 0 0 27 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.48 NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 14 45258554 45370144 1 1 27 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 21.6 0.1 98.98 0 1 2 Whitelist SARC-US 0.62 0.8 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 15 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 16 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 17 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 18 37288117 37301168 1 1 27 0 1 0 0 0 0.39 0.52 1 NA NA NA NA NA NA NA NA 21.6 0 99.96 0 2 NA Whitelist SARC-US 0.62 0.76 NA NA 0.59 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 2 0.04 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 19 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 20 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 21 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 22 NA NA 0 0 27 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 0 0 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::d40c99d0-79f6-499d-b7f1-5fc4237cfc57 X 31815450 32293467 2 2 27 2 0 0 0 0 0.11 0.15 4 0 0 4 3 4 7 3 4 21.6 0.33 99.67 0 1 0 Whitelist SARC-US 0.54 0.36 0 0 0.48 0 No SARC-US d40c99d0-79f6-499d-b7f1-5fc4237cfc57 SARC 0.41 2.19 SoftTissue-Leiomyo NA 4 0.07 NA 2 SARC-US DO219975 TCGA-DX-A3U8 d40c99d0-79f6-499d-b7f1-5fc4237cfc57 male deceased C48.0 NA 138 NA NA Included SoftTissue-Leiomyo SARC US 1 4.54 SARC-US::e786de34-4c21-460f-89ab-008de4347049 1 60949973 65751755 5 35 872 1 1 1 2 30 0.9 0.12 22 0 0 22 4 5 36 4 5 11.25 2.12 97.88 0 2 6 Whitelist SARC-US 4_6 0.8 0.3 0 0 0.92 1 Linked to high confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 40 0.02 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 2 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 3 70513200 80127855 7 28 872 0 4 2 1 21 0.17 0 16 0 0 16 3 3 16 3 3 11.25 0.61 99.25 1 2 48 Whitelist SARC-US 6 0.87 0 0 0 0.59 1 Linked to high confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 35 0.02 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 4 25848307 38595195 7 31 872 3 0 0 4 24 0.06 0.02 15 0 0 15 7 13 20 7 17 11.25 8.23 91.75 0 4 2 Whitelist SARC-US 6 0.68 0.07 0 0 0.48 1 High confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 38 0.02 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 5 NA NA 0 0 872 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 0 0 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 6 39847295 158859760 197 494 872 55 48 48 46 297 0.81 0 213 0 0 213 5 6 216 5 6 11.25 13.44 86.41 16 2 49 Whitelist SARC-US 4 0.97 0 0 0 0.86 1 High confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 691 0.4 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 7 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 8 39826169 145905988 4 16 872 0 4 0 0 12 0.01 0.03 6 0 0 6 0 4 8 0 4 11.25 0.47 99.21 0 2 3 Whitelist SARC-US 6 0.54 0.1 0 0 0.16 1 Linked to high confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 20 0.01 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 9 116268651 118268539 9 21 872 1 2 2 4 12 0.55 0 5 0 0 5 3 3 37 4 5 11.25 42.19 55.07 0 3 4 Whitelist SARC-US 0.95 0 0 0 0.64 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 30 0.02 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 10 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 11 NA NA 0 0 872 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 12 48431354 77284404 155 448 872 34 42 45 34 293 0.49 0 171 0 0 171 3 4 172 3 4 11.25 4.36 95.56 37 2 49 Whitelist SARC-US 4_6 0.64 0 0 0 0.64 1 High confidence SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc With other complex events 603 0.35 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 13 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 14 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 15 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 16 NA NA 0 0 872 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 17 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 18 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 19 NA NA 0 0 872 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 20 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 21 NA NA 0 0 872 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 1 0 NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 22 NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e786de34-4c21-460f-89ab-008de4347049 X NA NA 0 0 872 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e786de34-4c21-460f-89ab-008de4347049 SARC 0.38 2.37 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219967 TCGA-DX-A3LU e786de34-4c21-460f-89ab-008de4347049 male alive C48.0 NA NA 2144 NA Included SoftTissue-Liposarc SARC US 0 70.53 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 1 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 2 NA NA 0 0 696 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 3 94442780 174075990 14 69 696 5 3 3 3 55 0.84 0 50 0 0 50 7 13 51 7 14 65.69 48.81 47.85 10 2 3 Whitelist SARC-US 11_5_6 0.9 0.01 0 0 0.88 1 High confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 83 0.06 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 4 NA NA 0 0 696 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 5 1295334 20553339 7 20 696 1 1 3 2 13 0.67 0 18 0 0 18 5 5 44 5 7 65.69 80.93 16.38 0 2 3 Whitelist SARC-US 3_6 0.68 0.01 0 0 0.74 1 Linked to high confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 27 0.02 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 6 42555034 48239599 1 44 696 1 1 1 1 40 1 0.11 25 0 0 25 6 10 28 6 10 65.69 69.69 30.29 0 3 5 Whitelist SARC-US 11_3_5 0.62 0.28 0 0 1 1 Linked to high confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 48 0.03 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 7 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 8 16259414 17943416 1 5 696 0 0 1 1 3 0.57 0.02 7 0 0 7 0 3 18 4 8 65.69 83.48 16.42 0 4 2 Whitelist SARC-US 0.62 0.08 0 0 0.64 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 7 0.01 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 9 19739901 21085434 1 1 696 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 6 4 4 65.69 95.83 1.6 0 2 4 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 2 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 10 NA NA 0 0 696 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 4 4 0 0 0 0 0 0 Whitelist SARC-US NA 0 0 NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 11 993833 37433476 55 138 696 17 6 15 17 83 0.11 0 103 0 0 103 8 8 160 43 43 65.69 51.27 48.42 5 3 1 Whitelist SARC-US 3_5_6 0.45 0 0 0 0.48 1 High confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 193 0.14 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 12 8061289 120789609 195 354 696 46 42 49 58 159 0.42 0 174 0 0 174 4 8 178 4 10 65.69 40.63 55.69 39 2 4 Whitelist SARC-US 11_21_3_6 0.68 0 0 0 0.62 1 High confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 549 0.39 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 13 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 14 NA NA 0 0 696 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 15 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 16 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 17 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 18 NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 19 29150130 38233328 6 79 696 1 2 0 3 73 0.34 0 35 0 0 35 4 7 54 4 7 65.69 45.9 53.92 2 2 49 Whitelist SARC-US 11 0.93 0 0 0 0.59 1 Low confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 85 0.06 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 20 NA NA 0 0 696 0 0 0 0 0 NA 0.9 NA 0 NA NA NA NA 13 3 6 0 0 0 0 0 0 Whitelist SARC-US NA 1 0 NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 21 35308379 35766983 1 9 696 1 0 0 1 7 0.57 0.12 5 0 0 5 5 5 7 5 6 65.69 76.03 1.32 0 3 1 Whitelist SARC-US 0.85 0.3 0 0 0.64 1 Linked to high confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc Canonical without polyploidization 11 0.01 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc 22 16915315 49000417 6 44 696 2 2 1 1 38 0.88 0 35 0 0 35 4 5 38 4 5 65.69 57.74 31.15 1 3 2 Whitelist SARC-US 11_5_6 0.89 0 0 0 0.91 1 Low confidence SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc With other complex events 50 0.04 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::e7a72f7e-77b1-4d95-8f37-39a6cffc35dc X NA NA 0 0 696 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US e7a72f7e-77b1-4d95-8f37-39a6cffc35dc SARC 0.62 3.8 SoftTissue-Liposarc NA 0 0 NA 269 SARC-US DO219966 TCGA-DX-A3LT e7a72f7e-77b1-4d95-8f37-39a6cffc35dc male alive C49.1 NA NA 702 NA Included SoftTissue-Liposarc SARC US 0 23.09 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 1 145025792 241989428 66 182 595 14 16 16 20 116 0.76 0 228 0 0 228 5 6 242 11 11 74.17 97.51 2.49 9 3 10 Whitelist SARC-US 12 1 0 0 0 0.84 1 High confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 248 0.21 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 2 32029106 142428755 1 10 595 1 1 0 0 8 0.57 0 10 0 0 10 3 5 13 3 3 74.17 99.78 0.11 0 4 2 Whitelist SARC-US 1_12 0.54 0 0 0 0.64 1 Linked to high confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 12 0.01 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 3 116355802 116789248 1 1 595 1 0 0 0 0 0.39 0 2 0 0 NA NA NA 9 3 3 74.17 99.58 0.3 0 1 2 Whitelist SARC-US 0.62 0 0 0 0.59 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 4 19873557 19932362 1 1 595 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 74.17 99.9 0 0 1 3 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 5 2236113 10293559 3 24 595 2 1 0 0 21 0.3 0 23 0 0 23 5 9 53 8 12 74.17 99.87 0 0 5 1 Whitelist SARC-US 11 0.93 0.01 0 0 0.59 1 Linked to high confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 27 0.02 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 6 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 7 69067685 69083489 1 1 595 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 74.17 97.46 0.01 0 2 3 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 8 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 9 108341487 110724290 1 4 595 0 0 1 0 3 0.39 0 5 0 0 5 0 3 11 3 3 74.17 11.42 86.03 0 2 6 Whitelist SARC-US 12 0.68 0.02 0 0 0.59 1 Linked to high confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 5 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 10 68614487 68628687 1 1 595 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 74.17 99.81 0 0 4 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 11 132789 38263176 134 184 595 39 33 34 28 50 0.61 0 268 0 0 268 8 25 274 8 25 74.17 60.1 36.39 0 6 2 Whitelist SARC-US 0.86 0 0 0 0.68 1 High confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 318 0.27 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 12 8047626 76351792 81 202 595 20 21 18 22 121 0.93 0 250 0 0 250 6 7 255 6 6 74.17 96.21 0.05 15 3 10 Whitelist SARC-US 0.87 0 0 0 0.95 1 High confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc With other complex events 283 0.24 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 13 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 14 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 15 94621040 100706752 1 2 595 2 0 0 0 0 0.11 0 4 0 0 4 3 4 8 3 3 74.17 29.47 70.43 0 4 2 Whitelist SARC-US 0.54 0 0 0 0.48 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 16 836319 15985956 1 2 595 0 1 0 0 1 0.39 0.53 2 0 NA NA NA NA 9 4 4 74.17 54.67 45.24 0 3 4 Whitelist SARC-US 0.68 0.76 0 NA 0.59 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 3 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 17 NA NA 0 0 595 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 18 915255 52915207 23 23 595 6 7 5 5 0 0.92 0.02 52 0 0 52 32 52 54 33 54 74.17 95.17 0.18 0 4 3 Whitelist SARC-US 0.95 0.07 0 0 0.94 1 High confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc After polyploidization 46 0.04 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 19 34561921 54069327 15 22 595 4 5 2 4 7 0.74 0 5 0 0 5 3 5 5 3 3 74.17 99.83 0 1 4 5 Whitelist SARC-US 1_12 0.68 0.02 0 0 0.82 1 Linked to high confidence SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc After polyploidization 37 0.03 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 20 40681828 58367576 4 4 595 1 1 1 1 0 1 0.48 19 0 0 19 19 19 23 23 23 74.17 99.04 0 0 5 4 Whitelist SARC-US 1 0.72 0 0 1 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 8 0.01 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 21 17437637 37521883 4 4 595 0 1 2 1 0 0.57 0.85 9 0 0 9 5 9 10 5 5 74.17 68.45 8.9 0 3 4 Whitelist SARC-US 0.68 0.99 0 0 0.64 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 8 0.01 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 22 NA NA 0 0 595 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea0e5ae7-1f15-4504-aea3-efd1f6733304 X 32560069 62739550 1 2 595 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 74.17 0 100 0 2 NA Whitelist SARC-US 0.54 0 NA 0 0.48 1 No SARC-US ea0e5ae7-1f15-4504-aea3-efd1f6733304 SARC 0.44 3.26 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219944 TCGA-DX-A1KU ea0e5ae7-1f15-4504-aea3-efd1f6733304 male deceased C48.0 NA 427 NA NA Included SoftTissue-Liposarc SARC US 1 14.05 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 1 2466876 6163124 7 16 318 3 2 0 2 9 0.44 1 14 0 0 14 7 14 25 7 8 67.88 76.13 23.87 2 3 2 Whitelist SARC-US 2 0.62 1 0 0 0.64 1 High confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 23 0.04 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 2 9263222 242771262 22 126 318 7 6 6 3 104 0.65 0 103 0 0 103 12 19 105 13 16 67.88 89.95 9.96 6 1 2 Whitelist SARC-US 1_18_21 0.87 0 0 0 0.73 1 High confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 148 0.23 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 3 17045336 188368472 1 9 318 3 0 1 1 4 0.28 0 8 0 0 8 8 8 10 10 10 67.88 99.97 0 1 3 4 Whitelist SARC-US 22 0.62 0.02 0 0 0.59 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 14 0.02 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 4 37338106 70668064 1 5 318 1 0 1 0 3 0.57 0.01 10 0 0 10 4 5 12 5 8 67.88 73.11 24.53 0 2 3 Whitelist SARC-US 0.93 0.04 0 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 7 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 5 41106432 41170834 2 2 318 1 0 0 1 0 0.57 0 2 0 0 NA NA NA 7 4 4 67.88 99.86 0 0 3 4 Whitelist SARC-US 0.68 0 0 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 4 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 6 30240391 30328480 1 1 318 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 7 5 5 67.88 31.56 65.62 0 2 3 Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 2 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 7 NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 8 1968309 3220037 2 2 318 0 0 1 1 0 0.57 0 5 0.14 0 5 5 5 6 5 5 67.88 67.66 28.92 0 2 1 Whitelist SARC-US 0.68 0.01 0.14 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 4 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 9 5797068 28110995 1 2 318 0 1 1 0 0 0.57 0.03 6 0.8 0 6 4 6 13 7 7 67.88 74.46 25.34 3 2 1 Whitelist SARC-US 0.68 0.11 0.8 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 4 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 10 29037018 74756786 2 8 318 1 0 1 0 6 0.57 0.14 13 0 0 13 3 5 22 5 8 67.88 81.04 15.61 0 2 4 Whitelist SARC-US 2_22 1 0.34 0 0 0.64 1 Linked to high confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 10 0.02 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 11 22633386 33675388 7 7 318 4 3 0 0 0 0.06 0.23 5 0 0 5 5 5 10 6 7 67.88 56.76 42.81 0 4 2 Whitelist SARC-US 0.54 0.47 0 0 0.48 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 14 0.02 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 12 NA NA 0 0 318 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 0 3 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 13 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 14 NA NA 0 0 318 0 0 0 0 0 NA 0.42 NA 0 NA NA NA NA 9 3 5 0 0 0 0 0 0 Whitelist SARC-US NA 0.67 0 NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 15 87429238 89790147 5 11 318 4 1 0 0 6 0.04 0 2 0 0 NA NA NA 11 3 6 67.88 99.9 0 0 5 8 Whitelist SARC-US 2 0.62 0 0 0 0.36 1 Linked to high confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 16 0.03 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 16 NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA 7 3 7 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 17 7565907 17795410 1 2 318 1 0 0 1 0 0.57 0.3 2 0 0 NA NA NA 4 0 4 67.88 94.96 0 0 3 4 Whitelist SARC-US 0.68 0.54 0 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 4 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 18 275901 68359363 13 78 318 2 4 2 5 65 0.56 0 72 0 0 72 17 18 75 17 18 67.88 87.2 7.92 8 4 5 Whitelist SARC-US 2_21 0.87 0 0 0 0.64 1 High confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 91 0.14 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 19 29175041 36936422 2 4 318 1 1 0 0 2 0.57 0 7 0 0 7 0 3 29 4 4 67.88 87.92 4.72 0 7 2 Whitelist SARC-US 0.62 0 0 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 6 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 20 11048417 13998667 1 3 318 1 0 1 0 1 0.57 0.05 3 0 0 NA NA NA 12 4 5 67.88 99.01 0 0 4 3 Whitelist SARC-US 0.62 0.17 0 0 0.64 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 5 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 21 14714130 47619466 6 61 318 3 0 1 2 55 0.34 0 61 0 0 61 14 23 62 14 14 67.88 51.16 25.7 0 3 2 Whitelist SARC-US 2_18 0.62 0 0 0 0.59 1 High confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo With other complex events 67 0.11 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c 22 33283642 39131889 2 5 318 0 2 0 0 3 0.11 0 5 0 0 5 5 5 15 8 8 67.88 100 0 0 3 5 Whitelist SARC-US 2 0.68 0 0 0 0.48 1 Linked to high confidence SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo After polyploidization 7 0.01 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::ea3a524b-6ee3-4904-8924-29fcaa20985c X NA NA 0 0 318 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US ea3a524b-6ee3-4904-8924-29fcaa20985c SARC 0.87 3.16 SoftTissue-Leiomyo NA 0 0 NA 3 SARC-US DO219974 TCGA-DX-A3U7 ea3a524b-6ee3-4904-8924-29fcaa20985c male alive C49.2 NA NA 1301 NA Included SoftTissue-Leiomyo SARC US 0 42.8 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 1 177869666 181252262 2 12 562 0 0 1 1 10 0.57 0 3 0 0 NA NA NA 9 5 5 6.18 0.04 99.96 0 2 6 Whitelist SARC-US 12 0.68 0 0 0 0.64 1 Linked to high confidence SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc With other complex events 14 0.01 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 2 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 3 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 4 87382957 87494620 1 1 562 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 6.18 0 99.8 0 2 NA Whitelist SARC-US 0.62 0 NA NA 0.59 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 2 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 5 58274929 164485907 1 2 562 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 6.18 0 99.86 0 2 NA Whitelist SARC-US 0.54 0 NA 0 0.48 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 6 NA NA 0 0 562 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 7 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 8 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 9 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 10 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 11 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 12 43926078 100997188 336 484 562 88 80 91 77 148 0.67 0 441 0 0 441 7 8 442 7 8 6.18 12.9 87.02 41 2 49 Whitelist SARC-US 19 0.87 0 0 0 0.75 1 High confidence SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc With other complex events 820 0.73 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 13 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 14 NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 15 NA NA 0 0 562 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.26 0 NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 16 NA NA 0 0 562 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0 NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 17 NA NA 0 0 562 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.06 0 NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 18 6159239 7598972 1 2 562 2 0 0 0 0 0.11 0.7 5 0 0 5 3 5 7 4 4 6.18 1.05 98.94 0 2 6 Whitelist SARC-US 0.54 0.89 0 0 0.48 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 4 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 19 1283296 50665825 37 135 562 9 10 8 10 98 0.96 0 65 0 0 65 7 13 70 7 13 6.18 7.43 92.39 1 2 6 Whitelist SARC-US 12 0.93 0 0 0 0.97 1 High confidence SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc With other complex events 172 0.15 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 20 NA NA 0 0 562 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.23 0 NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 21 NA NA 0 0 562 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist SARC-US NA 0.11 0 NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c 22 NA NA 0 0 562 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA 0.89 NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SARC-US::f75d2589-fd7b-49a1-a1c8-0b4726b81f3c X NA NA 0 0 562 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SARC-US NA NA NA NA NA 1 No SARC-US f75d2589-fd7b-49a1-a1c8-0b4726b81f3c SARC 0.9 2.01 SoftTissue-Liposarc NA 0 0 NA 0 SARC-US DO219964 TCGA-DX-A2J4 f75d2589-fd7b-49a1-a1c8-0b4726b81f3c male alive C48.0 NA NA 1309 NA Included SoftTissue-Liposarc SARC US 0 43.06 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 1 63903848 76649553 4 9 50 0 2 1 1 5 0.57 0 12 0 0 12 6 12 14 7 14 60.92 54.9 45.1 0 2 4 Whitelist SKCM-US 0.85 0 0 0 0.64 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 13 0.13 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 2 117424411 118545292 1 1 50 1 0 0 0 0 0.39 1 2 0 NA NA NA NA 6 5 5 60.92 45.37 54.53 0 1 2 Whitelist SKCM-US 0.62 1 0 NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 3 61274210 116960820 1 2 50 2 0 0 0 0 0.11 0.58 4 NA 0 4 4 4 5 5 5 60.92 0.27 99.58 1 1 2 Whitelist SKCM-US 0.54 0.8 NA 0 0.48 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 4 0.04 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 4 154477884 154519762 1 1 50 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 60.92 99.96 0.02 2 2 3 Whitelist SKCM-US 0.62 0.93 NA NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 5 12908938 27322633 1 1 50 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA 4 4 4 60.92 97.34 0 0 3 4 Whitelist SKCM-US 0.62 0.62 NA NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 6 NA NA 0 0 50 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.93 NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 7 48939628 49091141 1 1 50 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA 4 3 3 60.92 97.31 0 0 3 4 Whitelist SKCM-US 0.62 0.76 NA NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 8 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 9 21823269 135816455 1 2 50 2 0 0 0 0 0.11 0.72 4 NA 0 4 3 4 5 3 3 60.92 0.28 99.01 2 2 0 Whitelist SKCM-US 0.54 0.9 NA 0 0.48 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 4 0.04 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 10 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 11 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 12 82386076 82793410 1 1 50 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 60.92 99.61 0.3 0 2 3 Whitelist SKCM-US 0.62 0.91 NA NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 13 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 14 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 15 NA NA 0 0 50 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 16 6509850 6809996 1 2 50 2 0 0 0 0 0.11 0.39 4 NA 0 4 4 4 5 5 5 60.92 0.29 99.59 0 1 2 Whitelist SKCM-US 0.54 0.63 NA 0 0.48 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 4 0.04 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 17 34042841 67932342 8 8 50 4 3 0 1 0 0.17 0 14 0 0 14 14 14 23 18 20 60.92 51.16 44.03 3 2 4 Whitelist SKCM-US 0.62 0 0 0 0.59 1 High confidence SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma Before polyploidization 16 0.16 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 18 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 19 NA NA 0 0 50 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.5 NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 20 15139400 15201131 1 1 50 1 0 0 0 0 0.39 0.29 2 NA NA NA NA NA NA NA NA 60.92 98.98 0 0 3 4 Whitelist SKCM-US 0.62 0.54 NA NA 0.59 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 21 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c 22 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::01ad975d-c2ed-4e4d-bd3b-c9512fc9073c X NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c SKCM 0.78 2.85 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37758 TCGA-DA-A1I2 01ad975d-c2ed-4e4d-bd3b-c9512fc9073c male deceased C77.9 45 0 NA NA Included Skin-Melanoma SKCM US 1 0 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 1 1375298 247642165 1 10 573 2 3 0 1 4 0.34 0 15 0 0 15 10 11 15 10 11 50.37 75.28 24.72 73 3 2 Whitelist SKCM-US 22 0.62 0 0 0 0.59 0 Linked to low confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma Canonical without polyploidization 16 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 2 69314092 204640630 1 5 573 0 3 0 1 1 0.11 0 9 0 0 9 8 9 10 8 8 50.37 38.13 59.15 43 2 3 Whitelist SKCM-US 0.62 0 0 0 0.48 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 9 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 3 115451969 115474959 1 1 573 0 0 1 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 50.37 99.54 0.35 25 2 3 Whitelist SKCM-US 0.62 0 0 NA 0.59 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 4 60175751 62799925 3 4 573 1 1 0 1 1 0.8 0 9 0 0 9 3 5 21 4 5 50.37 32.98 66.81 51 3 4 Whitelist SKCM-US 0.68 0.01 0 0 0.84 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 7 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 5 5702180 6058069 6 6 573 2 1 1 2 0 0.88 0.3 1 0 0 NA NA NA 29 8 8 50.37 98.98 0.89 3 4 NA Whitelist SKCM-US 0.93 0.55 0 0 0.91 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 12 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 6 503244 53879504 30 124 573 4 9 7 10 94 0.42 0 53 0 0 53 11 29 61 11 19 50.37 34 63.17 96 6 5 Whitelist SKCM-US 11_19_22_7 0.87 0 0 0 0.63 0 High confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 154 0.13 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 7 306183 65693059 31 98 573 7 7 7 10 67 0.83 0 89 0 0 89 6 10 95 6 10 50.37 25.6 74.17 74 3 5 Whitelist SKCM-US 11_19_22_6_8 0.9 0 0 0 0.87 0 Low confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 129 0.11 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 8 118357384 142919752 5 15 573 3 2 0 0 10 0.14 0.25 13 0 0 13 10 13 30 11 11 50.37 96.58 0 86 5 6 Whitelist SKCM-US 22_7 0.21 0.5 0 0 0.59 0 Linked to low confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma After polyploidization 20 0.02 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 False positive; manually removed SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 9 16730357 128093779 1 4 573 2 0 0 0 2 0.11 0 6 0.14 0 6 3 3 9 3 3 50.37 39.3 59.98 14 2 1 Whitelist SKCM-US 1 0.54 0 0.14 0 0.48 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 6 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 10 7198953 109536687 1 6 573 2 2 0 0 2 0.26 0 6 0 0 6 4 6 7 5 5 50.37 3.69 96.13 18 2 1 Whitelist SKCM-US 0.93 0 0 0 0.59 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 10 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 11 33008500 79611122 6 89 573 5 2 1 4 77 0.34 0 58 0 0 58 13 19 62 13 13 50.37 21.65 74.84 20 3 2 Whitelist SKCM-US 19_6_7 0.62 0 0 0 0.59 0 High confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 101 0.09 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 12 33481556 34247816 6 15 573 1 1 3 1 9 0.57 0.17 2 0 0 NA NA NA 16 5 5 50.37 76.65 19.61 0 3 4 Whitelist SKCM-US 17 0.73 0.38 0 0 0.64 0 Linked to high confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 21 0.02 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 13 NA NA 0 0 573 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 14 93066001 93131091 1 1 573 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 50.37 0 99.09 0 2 NA Whitelist SKCM-US 0.62 0 NA NA 0.59 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 15 NA NA 0 0 573 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 16 5826419 89518678 1 7 573 2 0 0 1 4 0.3 0.03 7 0 0 7 6 7 8 6 6 50.37 41.13 57.85 20 2 3 Whitelist SKCM-US 0.77 0.1 0 0 0.59 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 10 0.01 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 17 26903274 78531573 26 45 573 9 6 7 4 19 0.57 0 37 0 0 37 7 18 42 7 7 50.37 55.16 40.41 5 3 4 Whitelist SKCM-US 0.62 0 0 0 0.64 0 High confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 71 0.06 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 18 NA NA 0 0 573 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 19 32205724 58908289 3 34 573 1 1 2 2 28 0.88 0 28 0 0 28 14 19 29 14 19 50.37 31.31 61.06 20 3 2 Whitelist SKCM-US 11_22_6_7 0.87 0 0 0 0.91 0 Linked to high confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 40 0.03 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 False positive; manually removed SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 20 45122261 48202932 1 2 573 0 1 0 0 1 0.39 0.08 4 0 NA 4 3 4 12 5 5 50.37 99.02 0 4 4 3 Whitelist SKCM-US 0.68 0.23 0 NA 0.59 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 3 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 21 20210987 30572507 2 3 573 2 0 0 0 1 0.11 0.18 3 NA 0 NA NA NA 5 3 3 50.37 25.28 52.07 0 2 3 Whitelist SKCM-US 0.62 0.39 NA 0 0.48 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 5 0 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c 22 29353674 50585362 45 127 573 12 15 10 8 82 0.5 0 73 0 0 73 5 8 97 5 8 50.37 84.36 15.31 0 2 3 Whitelist SKCM-US 1_11_19_6_7 0.96 0 0 0 0.64 0 Low confidence SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma With other complex events 172 0.15 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::1404791b-86bf-4dfd-85b4-c8ff356f109c X 93131726 99720754 13 13 573 2 2 5 4 0 0.56 0.01 3 0 0 NA NA NA NA NA NA 50.37 99.8 0.2 0 1 2 Whitelist SKCM-US 0.68 0.06 0 0 0.64 0 No SKCM-US 1404791b-86bf-4dfd-85b4-c8ff356f109c SKCM 0.89 2.68 Skin-Melanoma NA 26 0.02 NA 3 SKCM-US DO37474 TCGA-FS-A1ZK 1404791b-86bf-4dfd-85b4-c8ff356f109c male deceased C44.9 68 728 NA NA Included Skin-Melanoma SKCM US 1 23.95 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 1 54336808 200744758 1 4 108 1 3 0 0 0 0.11 0.15 6 0 0 6 4 6 7 5 5 56.9 94.71 5.27 190 3 4 Whitelist SKCM-US 0.54 0.35 0 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 8 0.04 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 2 137330210 217835873 1 5 108 1 4 0 0 0 0.04 0.6 10 0 0 10 3 6 11 3 7 56.9 99.85 0.01 208 3 4 Whitelist SKCM-US 0.45 0.82 0 0 0.36 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 10 0.05 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 3 19488007 144088954 4 4 108 1 1 1 1 0 1 0.85 7 0 0 7 5 7 7 5 7 56.9 67.22 32.75 178 2 3 Whitelist SKCM-US 1 0.98 0 0 1 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 8 0.04 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 4 85856791 148727284 1 2 108 0 2 0 0 0 0.11 0.33 3 0 0 NA NA NA 7 3 5 56.9 99.85 0 328 4 6 Whitelist SKCM-US 0.54 0.58 0 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 5 1296282 31464643 24 25 108 6 4 7 7 1 0.8 0 24 0 0 24 7 7 32 7 11 56.9 15.58 81.72 176 4 2 Whitelist SKCM-US 0.96 0 0 0 0.84 1 High confidence SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma With other complex events 49 0.23 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 6 4051284 80120017 1 3 108 0 2 1 0 0 0.3 0.22 3 0.49 0 NA NA NA 5 3 4 56.9 46.8 53.06 259 2 4 Whitelist SKCM-US 0.62 0.45 0.49 0 0.59 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 6 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 7 70128382 129688554 1 3 108 1 2 0 0 0 0.3 0.29 4 0 0 4 3 4 5 3 3 56.9 99.77 0 180 4 3 Whitelist SKCM-US 0.62 0.53 0 0 0.59 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 6 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 8 NA NA 0 0 108 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.15 NA NA NA 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 9 21038303 135283835 1 3 108 1 0 1 0 1 0.57 0.62 8 0 0 8 4 6 11 5 7 56.9 15.49 83.81 45 2 3 Whitelist SKCM-US 0.87 0.83 0 0 0.64 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 5 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 10 28847858 102043499 1 2 108 0 2 0 0 0 0.11 0.25 4 NA 0 4 4 4 5 5 5 56.9 99.82 0 162 3 5 Whitelist SKCM-US 0.54 0.49 NA 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 11 60708202 60810875 1 1 108 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA NA NA NA 56.9 0.08 99.5 0 2 4 Whitelist SKCM-US 0.62 0.49 NA NA 0.59 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 12 44527293 127533801 10 13 108 1 3 3 3 3 0.75 0 16 0 0 16 8 16 19 8 10 56.9 81.54 14.72 150 4 3 Whitelist SKCM-US 0.68 0 0 0 0.83 1 High confidence SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma With other complex events 23 0.11 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 13 50221942 88627920 1 2 108 0 2 0 0 0 0.11 0.59 4 NA 0 4 4 4 5 5 5 56.9 0.22 99.78 2 2 4 Whitelist SKCM-US 0.54 0.81 NA 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 14 41582292 50636866 1 2 108 0 2 0 0 0 0.11 0.78 3 NA 0 NA NA NA NA NA NA 56.9 0.47 98.61 0 2 4 Whitelist SKCM-US 0.54 0.93 NA 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 15 52533222 89502456 2 2 108 1 0 0 1 0 0.57 0 14 0 0 14 10 14 19 10 10 56.9 46.15 53.68 41 3 4 Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 16 390547 444008 1 1 108 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 56.9 99.91 0 0 3 4 Whitelist SKCM-US 0.62 0.63 NA NA 0.59 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 17 NA NA 0 0 108 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.63 NA NA NA 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 18 68797942 68877893 1 1 108 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 56.9 0.1 99.86 151 2 3 Whitelist SKCM-US 0.62 0.63 NA NA 0.59 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 19 NA NA 0 0 108 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 20 17174622 50477781 1 4 108 0 2 0 0 2 0.11 0.03 5 0 0 5 3 3 9 5 5 56.9 52.67 40.32 112 6 2 Whitelist SKCM-US 0.68 0.11 0 0 0.48 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 6 0.03 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 21 29810204 36267315 1 2 108 1 1 0 0 0 0.57 0.01 3 0 0 NA NA NA 9 3 7 56.9 70.18 0.41 6 3 5 Whitelist SKCM-US 0.68 0.05 0 0 0.64 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 22 33345600 41951204 1 3 108 0 1 0 0 2 0.39 0.14 2 NA 0 NA NA NA 4 4 4 56.9 100 0 0 4 5 Whitelist SKCM-US 12 0.62 0.33 NA 0 0.59 1 Linked to high confidence SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma With other complex events 4 0.02 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::210726bd-db19-48ae-9a3d-e6ac44480e85 X NA NA 0 0 108 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.15 NA NA NA 1 No SKCM-US 210726bd-db19-48ae-9a3d-e6ac44480e85 SKCM 0.66 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7577099_T_C,CN:2 4 SKCM-US DO37659 TCGA-DA-A1HV 210726bd-db19-48ae-9a3d-e6ac44480e85 female alive C77.9 75 NA 26 NA Included Skin-Melanoma SKCM US 0 0.86 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 1 95786241 242123097 1 6 87 4 1 0 1 0 0.11 0.84 10 0 0 10 5 9 11 5 5 65.04 99.33 0.67 12 3 2 Whitelist SKCM-US 0.54 0.98 0 0 0.48 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 12 0.07 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 2 196373934 196620968 1 1 87 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 65.04 99.71 0.19 2 2 3 Whitelist SKCM-US 0.62 0.05 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 3 102279974 162133459 1 3 87 1 0 1 1 0 0.8 0.29 4 0 0 4 4 4 5 5 5 65.04 0.05 99.83 5 1 2 Whitelist SKCM-US 0.87 0.53 0 0 0.84 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 6 0.03 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 4 139483168 167110416 12 12 87 5 2 3 2 0 0.57 0 16 0 0 16 8 8 17 8 8 65.04 99.89 0.11 16 2 3 Whitelist SKCM-US 0.68 0 0 0 0.64 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 24 0.14 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 False positive; manually removed SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 5 61932055 62089116 2 2 87 0 0 1 1 0 0.57 0 4 0 0 4 4 4 18 6 6 65.04 99.42 0.46 7 2 3 Whitelist SKCM-US 0.68 0.02 0 0 0.64 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 4 0.02 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 6 48173403 102209514 1 5 87 1 1 0 0 3 0.57 1 7 0 0 7 7 7 8 8 8 65.04 37.55 62.31 5 2 3 Whitelist SKCM-US 0.93 1 0 0 0.64 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 7 0.04 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 7 3361184 56229420 1 3 87 1 1 0 0 1 0.57 0.81 3 0.01 0.01 NA NA NA NA NA NA 65.04 99.78 0 7 4 5 Whitelist SKCM-US 0.62 0.96 0.01 0.01 0.64 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 5 0.03 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 8 33834303 69536726 1 2 87 1 1 0 0 0 0.57 1 4 0 0 4 3 4 5 3 3 65.04 99.33 0.56 8 3 2 Whitelist SKCM-US 0.68 1 0 0 0.64 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 4 0.02 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 9 19655555 26650002 1 1 87 1 0 0 0 0 0.39 0.27 2 NA NA NA NA NA NA NA NA 65.04 4.95 94.91 0 0 2 Whitelist SKCM-US 0.62 0.51 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 10 881509 38175147 11 11 87 5 3 1 2 0 0.36 0 30 0 0 30 6 11 49 6 7 65.04 25.73 70.89 0 2 3 Whitelist SKCM-US 0.62 0 0 0 0.59 0 Low confidence SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma With other complex events 22 0.13 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 11 NA NA 0 0 87 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.41 NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 12 NA NA 0 0 87 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.42 NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 13 65860688 65881558 1 1 87 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 65.04 99.98 0.02 1 2 3 Whitelist SKCM-US 0.62 0.93 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 14 NA NA 0 0 87 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 15 94708867 95749260 1 1 87 1 0 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 65.04 99.87 0 0 3 4 Whitelist SKCM-US 0.62 0.91 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 16 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 17 NA NA 0 0 87 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.91 NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 18 48270490 48437730 1 1 87 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 65.04 99.99 0 4 3 4 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 19 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 20 50070500 50112402 1 1 87 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.04 98.95 0.07 1 2 4 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 21 NA NA 0 0 87 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 22 27883836 38494659 1 3 87 1 1 0 1 0 0.8 0.02 5 0 0 5 3 5 5 3 3 65.04 99.98 0.02 0 3 2 Whitelist SKCM-US 0.87 0.08 0 0 0.84 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 6 0.03 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::238111f9-a08b-49b4-9035-cc43026330e7 X 107809088 107826654 1 1 87 0 1 0 0 0 0.39 0.8 2 0 0 NA NA NA NA NA NA 65.04 0.01 99.99 0 2 3 Whitelist SKCM-US 0.62 0.95 0 0 0.59 0 No SKCM-US 238111f9-a08b-49b4-9035-cc43026330e7 SKCM 0.89 2.79 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37827 TCGA-D3-A1Q5 238111f9-a08b-49b4-9035-cc43026330e7 male deceased C77.9 60 3424 NA NA Included Skin-Melanoma SKCM US 1 112.63 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 1 226912196 249174065 1 1 170 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 76.33 99.97 0 9 4 NA Whitelist SKCM-US 0.62 0 NA NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 2 220968417 240329910 1 2 170 2 0 0 0 0 0.11 0.27 4 0 0 4 3 4 5 3 5 76.33 99.89 0.01 14 4 2 Whitelist SKCM-US 0.54 0.51 0 0 0.48 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 4 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 3 NA NA 0 0 170 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.12 0 NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 4 30343559 185259609 1 7 170 1 1 0 1 4 0.8 0.88 3 0 0 NA NA NA NA NA NA 76.33 99.9 0.08 106 4 2 Whitelist SKCM-US 0.77 1 0 0 0.84 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 10 0.03 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 5 3876320 29807346 2 2 170 0 0 1 1 0 0.57 0.16 1 0.01 0 NA NA NA NA NA NA 76.33 75.19 24.69 38 4 NA Whitelist SKCM-US 0.68 0.36 0.01 0 0.64 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 4 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 6 4799433 14498344 79 83 170 22 22 17 18 4 0.79 0 57 0 0 57 4 8 60 4 6 76.33 97.18 0 17 49 24 Whitelist SKCM-US 0.77 0 0 0 0.84 0 Low confidence SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma With other complex events 162 0.48 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 7 15914471 158528413 1 3 170 1 1 0 0 1 0.57 0.04 4 NA 0.01 4 3 4 5 3 3 76.33 91.19 8.58 63 3 2 Whitelist SKCM-US 0.62 0.13 NA 0.01 0.64 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 5 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 8 NA NA 0 0 170 0 0 0 0 0 NA 0.29 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.54 0 NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 9 NA NA 0 0 170 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.07 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 10 NA NA 0 0 170 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.26 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 11 25651788 81149065 1 6 170 1 0 1 2 2 0.57 0.59 2 0 0 NA NA NA NA NA NA 76.33 99.57 0 35 3 4 Whitelist SKCM-US 0.93 0.81 0 0 0.64 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 10 0.03 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 12 68553802 74066796 10 11 170 1 2 4 3 1 0.57 0 24 0 0 24 5 5 38 6 7 76.33 43.94 52.18 3 20 22 Whitelist SKCM-US 0.68 0 0 0 0.64 0 Low confidence SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma With other complex events 21 0.06 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 13 69056088 69081523 2 2 170 0 0 1 1 0 0.57 0.29 3 0 0 NA NA NA NA NA NA 76.33 85.84 0.01 0 4 2 Whitelist SKCM-US 0.68 0.54 0 0 0.64 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 4 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 14 28187877 28415355 1 1 170 1 0 0 0 0 0.39 0.82 2 NA NA NA NA NA 5 4 4 76.33 54.98 29.1 0 2 3 Whitelist SKCM-US 0.62 0.96 NA NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 15 NA NA 0 0 170 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.59 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 16 NA NA 0 0 170 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.59 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 17 4789057 56102342 1 5 170 1 1 0 0 3 0.57 0.81 6 0 0 6 4 6 7 4 7 76.33 95.57 0 13 3 4 Whitelist SKCM-US 0.93 0.96 0 0 0.64 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 7 0.02 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 18 5401177 5450984 1 1 170 1 0 0 0 0 0.39 0.1 2 NA NA NA NA NA NA NA NA 76.33 99.9 0.06 1 2 3 Whitelist SKCM-US 0.62 0.26 NA NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 19 11413860 12032655 1 1 170 1 0 0 0 0 0.39 0.4 2 0 NA NA NA NA NA NA NA 76.33 99.83 0 0 3 4 Whitelist SKCM-US 0.62 0.64 0 NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 20 14951255 15639053 1 1 170 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 76.33 99.03 0 1 3 4 Whitelist SKCM-US 0.62 0.52 NA NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 21 NA NA 0 0 170 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.9 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 22 40913202 41154530 1 1 170 0 1 0 0 0 0.39 0.15 2 NA NA NA NA NA 5 3 5 76.33 76.22 0 0 3 4 Whitelist SKCM-US 0.62 0.34 NA NA 0.59 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 X NA NA 0 0 170 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.06 NA NA NA 0 No SKCM-US 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 SKCM 0.86 3.45 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579545_T_C,CN:3 39 SKCM-US DO47268 TCGA-EE-A3JI 296f44f9-3ecb-4b40-ae51-c3a06e3fbe00 male alive C77.3 48 NA 4504 NA Included Skin-Melanoma SKCM US 0 148.16 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 1 115652442 144998190 6 6 36 1 1 1 3 0 0.57 0 12 0 0 12 4 4 16 4 6 71.93 58.18 41.82 6 6 5 Whitelist SKCM-US 0.68 0 0 0 0.64 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 12 0.17 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 2 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 3 136380373 136394694 1 1 36 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 71.93 99.87 0 4 3 NA Whitelist SKCM-US 0.62 0.05 0 NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 4 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 5 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 6 113045032 136577217 1 4 36 1 1 0 0 2 0.57 0.01 9 0 0 9 4 5 11 4 5 71.93 67.66 32.19 9 2 1 Whitelist SKCM-US 0.68 0.03 0 0 0.64 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 6 0.08 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 7 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 8 61678991 61835308 1 1 36 1 0 0 0 0 0.39 0.43 1 NA NA NA NA NA NA NA NA 71.93 99.99 0 6 3 NA Whitelist SKCM-US 0.62 0.68 NA NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 9 NA NA 0 0 36 0 0 0 0 0 NA 0.65 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.86 NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 10 50067239 50086315 1 1 36 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 71.93 0.01 99.78 0 1 2 Whitelist SKCM-US 0.62 0.23 NA NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 11 NA NA 0 0 36 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.47 NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 12 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 13 105314965 105325378 1 1 36 1 0 0 0 0 0.39 0.35 2 NA NA NA NA NA NA NA NA 71.93 99.99 0.01 2 2 3 Whitelist SKCM-US 0.62 0.61 NA NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 14 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 15 NA NA 0 0 36 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 16 62968612 63056057 1 1 36 1 0 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 71.93 99.96 0 1 4 NA Whitelist SKCM-US 0.62 0.84 NA NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 17 1261657 1273505 1 1 36 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 71.93 99.99 0 0 3 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 2 0.03 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 18 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 19 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 20 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 21 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb 22 NA NA 0 0 36 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3409f118-1798-48d6-9556-12a5c77ebefb X 28617035 123122932 1 2 36 1 0 0 1 0 0.57 0.43 1 0 0 NA NA NA NA NA NA 71.93 99.78 0 9 3 NA Whitelist SKCM-US 0.68 0.68 0 0 0.64 0 No SKCM-US 3409f118-1798-48d6-9556-12a5c77ebefb SKCM 0.75 2.89 Skin-Melanoma NA 4 0.06 NA 3 SKCM-US DO37750 TCGA-ER-A19D 3409f118-1798-48d6-9556-12a5c77ebefb female deceased C49.3 46 383 NA NA Included Skin-Melanoma SKCM US 1 12.6 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 1 155839251 204554164 14 36 107 2 4 3 5 22 0.7 0 13 0 0 13 6 10 17 7 7 64.88 99.67 0 868 5 1 Whitelist SKCM-US 0.68 0 0 0 0.78 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 50 0.23 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 2 145642288 145716340 1 1 107 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 6 5 5 64.88 99.89 0 378 3 4 Whitelist SKCM-US 0.62 0.12 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 3 24607711 24624332 2 2 107 1 1 0 0 0 0.57 0.57 1 0 0 NA NA NA 6 3 3 64.88 96.86 0.06 238 4 NA Whitelist SKCM-US 0.68 0.79 0 0 0.64 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 4 55445668 182522953 1 5 107 2 1 1 1 0 0.9 0.85 6 0 0 6 5 6 7 5 5 64.88 0.3 99.7 655 2 1 Whitelist SKCM-US 0.93 0.98 0 0 0.92 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 10 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 5 55080394 55096201 4 15 107 1 1 1 1 11 1 0 1 0 0 NA NA NA 7 3 5 64.88 0.6 99.29 606 2 NA Whitelist SKCM-US 1 0.62 0 0 0 1 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 19 0.09 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 6 32666781 144470426 1 4 107 3 1 0 0 0 0.11 0.3 10 0 0 10 6 10 13 6 6 64.88 97.02 0.03 1983 3 4 Whitelist SKCM-US 0.54 0.55 0 0 0.48 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 7 63762678 86326411 1 2 107 2 0 0 0 0 0.11 1 4 0.01 0 4 4 4 8 5 5 64.88 97.4 0.18 667 2 3 Whitelist SKCM-US 0.54 1 0.01 0 0.48 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 8 94851160 94942138 1 1 107 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 3 64.88 96.47 0 520 3 5 Whitelist SKCM-US 0.62 0.15 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 9 101576138 101666230 1 1 107 0 1 0 0 0 0.39 0.45 2 NA NA NA NA NA 4 3 4 64.88 99.3 0 0 3 4 Whitelist SKCM-US 0.62 0.69 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 10 33339696 57106864 1 3 107 2 1 0 0 0 0.3 1 5 0 0 5 3 5 5 3 3 64.88 0.47 99.35 350 2 1 Whitelist SKCM-US 0.62 1 0 0 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 6 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 11 NA NA 0 0 107 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.74 NA NA NA 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 12 25457186 74884492 1 3 107 0 1 1 0 1 0.57 0 8 0 0 8 3 3 9 3 3 64.88 99.92 0 137 6 2 Whitelist SKCM-US 0.87 0.02 0 0 0.64 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 5 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 13 55071886 55155428 1 1 107 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA 5 3 5 64.88 0.16 99.84 0 2 3 Whitelist SKCM-US 0.62 0.81 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 14 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 15 NA NA 0 0 107 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 16 1851705 78165601 1 4 107 1 2 1 0 0 0.57 0.54 5 0.61 0 5 3 5 5 3 3 64.88 99.9 0 772 3 1 Whitelist SKCM-US 0.68 0.77 0.61 0 0.64 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 8 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 17 32323478 32433136 1 1 107 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA 6 3 6 64.88 61.04 38.94 0 2 3 Whitelist SKCM-US 0.62 0.93 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 18 12468268 12533704 1 1 107 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 64.88 95.35 0 7 3 NA Whitelist SKCM-US 0.62 0.63 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 19 19986884 20067482 1 1 107 0 1 0 0 0 0.39 1 2 NA NA NA NA NA 5 0 3 64.88 92.72 0 0 3 6 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 20 1227290 1772513 1 1 107 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 64.88 99.03 0 7 3 4 Whitelist SKCM-US 0.62 0.91 NA NA 0.59 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 21 NA NA 0 0 107 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 22 NA NA 0 0 107 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 0 NA NA 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3429967f-4f77-4894-bf27-c4a22698ca92 X 71373559 112784273 1 2 107 1 1 0 0 0 0.57 0.18 2 NA 0 NA NA NA NA NA NA 64.88 0.24 99.76 111 2 3 Whitelist SKCM-US 0.68 0.4 NA 0 0.64 0 No SKCM-US 3429967f-4f77-4894-bf27-c4a22698ca92 SKCM 0.52 2.88 Skin-Melanoma NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7577070_A_G;17_7578454_A_G,CN:2 3 SKCM-US DO37432 TCGA-GN-A266 3429967f-4f77-4894-bf27-c4a22698ca92 male deceased C44.4 45 308 NA NA Included Skin-Melanoma SKCM US 1 10.13 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 1 170555556 174159090 1 2 179 1 1 0 0 0 0.57 0.58 4 0 0 4 3 4 16 4 4 30.84 50.69 46.32 0 4 1 Whitelist SKCM-US 0.68 0.8 0 0 0.64 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 2 109172422 109450418 1 1 179 1 0 0 0 0 0.39 0.69 1 0 NA NA NA NA 8 8 8 30.84 27.48 72.43 0 2 NA Whitelist SKCM-US 0.62 0.89 0 NA 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 3 20473321 174992135 1 15 179 2 0 0 1 12 0.3 0.01 4 0 0 4 4 4 4 4 4 30.84 22.74 77.12 5 2 3 Whitelist SKCM-US 11 0.65 0.05 0 0 0.59 1 Linked to high confidence SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma Canonical without polyploidization 18 0.05 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 4 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 5 52969272 84413143 15 16 179 6 4 3 2 1 0.51 0 23 0 0 23 13 23 28 14 14 30.84 53.95 43.36 2 4 5 Whitelist SKCM-US 0.79 0 0 0 0.64 1 High confidence SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma With other complex events 31 0.09 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 6 13762190 151691765 1 10 179 0 0 1 0 9 0.39 0.2 4 0 0 4 0 3 7 3 3 30.84 26.83 73.03 4 2 4 Whitelist SKCM-US 0.62 0.43 0 0 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 11 0.03 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 7 NA NA 0 0 179 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.75 0 NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 8 9609293 18136744 1 3 179 1 0 0 1 1 0.57 0.49 4 0 0 4 4 4 10 8 8 30.84 73.74 22.73 0 1 2 Whitelist SKCM-US 0.62 0.74 0 0 0.64 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 5 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 9 32349783 32817647 12 12 179 3 1 3 5 0 0.45 0 7 0 0 7 3 3 37 3 5 30.84 26.25 73.05 0 4 3 Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 24 0.07 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 10 68312598 126321134 1 3 179 0 0 1 0 2 0.39 0.15 1 NA 0 NA NA NA NA NA NA 30.84 0 99.82 2 2 NA Whitelist SKCM-US 0.62 0.36 NA 0 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 11 68283918 109705790 7 40 179 2 1 2 2 33 0.93 0 40 0 0 40 7 11 43 7 7 30.84 43.86 55.72 3 3 4 Whitelist SKCM-US 0.62 0 0 0 0.95 1 High confidence SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma With other complex events 47 0.13 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 12 32232123 32451579 1 1 179 1 0 0 0 0 0.39 0.48 2 0 NA NA NA NA NA NA NA 30.84 0.16 95.46 0 1 2 Whitelist SKCM-US 0.62 0.73 0 NA 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 13 NA NA 0 0 179 0 0 0 0 0 NA 0.84 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.97 NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 14 NA NA 0 0 179 0 0 0 0 0 NA 0.83 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.97 0 NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 15 34591970 41834780 1 6 179 0 1 0 0 5 0.39 0 1 0 0 NA NA NA NA NA NA 30.84 36.14 63.71 0 2 NA Whitelist SKCM-US 0.54 0 0 0 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 7 0.02 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 16 78967496 78989135 1 1 179 1 0 0 0 0 0.39 0.49 2 0 NA NA NA NA 6 3 3 30.84 12.48 87.15 0 1 2 Whitelist SKCM-US 0.62 0.73 0 NA 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 17 48510380 48525344 1 1 179 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 30.84 67.58 27.99 0 2 3 Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 18 NA NA 0 0 179 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 19 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 20 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 21 NA NA 0 0 179 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.03 0 NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c 22 NA NA 0 0 179 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3582fb74-f43d-4fcd-8f22-bb1506fcff1c X NA NA 0 0 179 0 0 0 0 0 NA 1 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 0 NA NA 1 No SKCM-US 3582fb74-f43d-4fcd-8f22-bb1506fcff1c SKCM 0.94 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37607 TCGA-DA-A3F3 3582fb74-f43d-4fcd-8f22-bb1506fcff1c male alive C77.0 52 NA 151 NA Included Skin-Melanoma SKCM US 0 4.97 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 1 58767112 233066054 1 11 262 5 5 0 0 1 0.02 0.17 20 0 0 20 3 6 21 3 7 62.82 96.63 0.06 13 3 4 Whitelist SKCM-US 0.54 0.38 0 0 0.33 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 21 0.04 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 2 50665041 219854802 1 7 262 3 4 0 0 0 0.06 0.01 10 0 0 10 6 10 11 7 7 62.82 99.71 0.2 13 4 2 Whitelist SKCM-US 0.54 0.03 0 0 0.48 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 14 0.03 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 3 98573207 109821728 14 16 262 5 3 3 3 2 0.84 0 18 0 0 18 4 8 54 14 18 62.82 66.28 33.6 5 3 5 Whitelist SKCM-US 0.95 0 0 0 0.88 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 30 0.06 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 4 70143741 70160123 1 1 262 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 5 62.82 0.01 99.78 0 2 4 Whitelist SKCM-US 0.62 0.01 0 NA 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 5 21552863 180645353 1 6 262 2 1 1 0 2 0.57 0.06 9 0 0 9 5 9 9 5 9 62.82 99.86 0 27 3 4 Whitelist SKCM-US 0.93 0.18 0 0 0.64 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 10 0.02 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 6 22577457 166072152 1 9 262 4 2 1 1 1 0.39 0.79 21 0 0 21 5 5 24 5 5 62.82 29.92 67.08 3 2 4 Whitelist SKCM-US 0.68 0.95 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 17 0.03 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 7 90201391 158391119 21 21 262 2 9 5 5 0 0.19 0 45 0 0 45 4 11 52 4 11 62.82 96.27 1.12 12 4 7 Whitelist SKCM-US 0.62 0 0 0 0.59 1 Low confidence SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma With other complex events 42 0.08 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 8 105634697 108827052 1 3 262 2 1 0 0 0 0.3 0.16 2 0 0 NA NA NA 8 7 8 62.82 79.81 20.08 5 2 3 Whitelist SKCM-US 0.62 0.36 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 6 0.01 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 9 34192125 138885872 28 30 262 4 6 10 8 2 0.41 0 50 0 0 50 15 37 54 15 17 62.82 73.88 23.54 4 4 3 Whitelist SKCM-US 0.66 0 0 0 0.62 1 High confidence SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma With other complex events 58 0.11 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 10 18812145 56122648 1 2 262 1 1 0 0 0 0.57 0.01 2 0 0 NA NA NA NA NA NA 62.82 0.01 99.81 3 2 4 Whitelist SKCM-US 0.68 0.05 0 0 0.64 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 11 109990069 110058986 1 1 262 0 1 0 0 0 0.39 0.14 2 0 NA NA NA NA 12 3 5 62.82 99.43 0.01 2 3 5 Whitelist SKCM-US 0.62 0.34 0 NA 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 12 14914745 114415982 1 8 262 0 3 1 0 4 0.11 0.66 10 0 0 10 3 8 10 3 5 62.82 34.66 61.09 6 2 3 Whitelist SKCM-US 0.62 0.87 0 0 0.48 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 12 0.02 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 13 54358152 87880993 1 3 262 2 1 0 0 0 0.3 0.09 3 0 0 NA NA NA NA NA NA 62.82 99.92 0.08 0 4 2 Whitelist SKCM-US 0.62 0.25 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 6 0.01 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 14 23532192 23683387 1 1 262 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 62.82 0.14 99.5 0 2 3 Whitelist SKCM-US 0.62 0.02 NA NA 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 15 33529258 101777977 1 7 262 2 3 0 1 1 0.34 0.26 10 0 0 10 4 6 12 5 5 62.82 99.19 0.07 3 4 3 Whitelist SKCM-US 0.77 0.5 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 13 0.02 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 16 62882637 81135835 1 4 262 2 2 0 0 0 0.26 0.85 7 0 0 7 3 6 10 3 4 62.82 25.51 74.39 0 4 2 Whitelist SKCM-US 0.62 0.98 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 8 0.02 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 17 920696 74610424 1 8 262 2 2 1 0 3 0.53 0.7 11 0 0 11 4 5 14 5 5 62.82 63.41 36.58 1 2 4 Whitelist SKCM-US 0.87 0.9 0 0 0.64 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 13 0.02 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 18 NA NA 0 0 262 0 0 0 0 0 NA 0.18 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.39 NA NA NA 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 19 389870 56191245 1 4 262 1 1 0 0 2 0.57 0.82 4 0.01 0.01 4 3 4 5 3 3 62.82 99.03 0.8 6 4 2 Whitelist SKCM-US 0.68 0.96 0.01 0.01 0.64 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 6 0.01 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 20 31479759 60071503 10 13 262 5 2 1 2 3 0.31 0 18 0 0 18 6 16 20 7 7 62.82 52.3 40.57 1 4 3 Whitelist SKCM-US 0.8 0 0 0 0.59 1 Low confidence SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma With other complex events 23 0.04 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 21 29845708 29878173 1 1 262 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 62.82 0.07 77.65 0 2 4 Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b 22 NA NA 0 0 262 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.63 NA NA NA 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::3fea3f02-2db3-44e0-984e-c61130d92c9b X 63127526 63913142 3 4 262 0 0 1 2 1 0.3 0.2 4 0 0 4 3 4 19 3 5 62.82 81.97 14.65 0 2 4 Whitelist SKCM-US 0.62 0.42 0 0 0.59 1 No SKCM-US 3fea3f02-2db3-44e0-984e-c61130d92c9b SKCM 0.74 3.05 Skin-Melanoma NA 7 0.01 NA 2 SKCM-US DO47542 TCGA-ER-A19E 3fea3f02-2db3-44e0-984e-c61130d92c9b female deceased C44.5 36 396 NA NA Included Skin-Melanoma SKCM US 1 13.03 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 1 4999358 108470074 33 36 140 7 8 9 9 3 0.95 0 7 0 0 7 3 7 15 7 13 29.44 31.5 68.49 6 3 1 Whitelist SKCM-US 0.93 0 0 0 0.97 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 69 0.25 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 2 46109072 46286603 1 1 140 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 29.44 0.07 99.82 0 1 2 Whitelist SKCM-US 0.62 0 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 3 20988755 178740917 1 3 140 2 1 0 0 0 0.3 0.02 5 0 0 5 3 5 5 3 3 29.44 0.27 99.69 39 2 1 Whitelist SKCM-US 0.62 0.08 0.01 0 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 4 12183011 177401875 1 12 140 2 2 0 0 8 0.26 0.39 6 0 0 6 3 6 6 3 3 29.44 7.31 92.49 45 2 1 Whitelist SKCM-US 8 0.83 0.64 0 0 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 16 0.06 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 5 499975 164322849 1 4 140 1 1 0 0 2 0.57 0.22 4 0 0 4 3 4 6 4 4 29.44 28.49 71.37 42 2 1 Whitelist SKCM-US 1 0.46 0 0 0.64 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 6 NA NA 0 0 140 0 0 0 0 0 NA 0.48 NA 0.1 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.72 0.11 NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 7 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 8 50784712 66016345 6 14 140 3 0 1 2 8 0.34 0 8 0 0 8 8 8 10 10 10 29.44 65.19 34.81 12 2 3 Whitelist SKCM-US 0.81 0.01 0 0 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 20 0.07 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 False positive; manually removed SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 9 32139979 140579391 21 25 140 5 8 5 3 4 0.49 0 46 0 0 46 21 46 50 21 21 29.44 36.9 60.49 15 2 3 Whitelist SKCM-US 22 0.68 0 0 0 0.64 0 High confidence SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma With other complex events 46 0.16 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 10 73989458 74006873 1 1 140 0 1 0 0 0 0.39 0.22 1 NA NA NA NA NA NA NA NA 29.44 12.4 87.41 0 2 NA Whitelist SKCM-US 0.62 0.46 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 11 485832 10257739 1 3 140 3 0 0 0 0 0.03 0.22 6 0 0 6 6 6 7 7 7 29.44 0.34 99.11 0 1 2 Whitelist SKCM-US 0.41 0.46 0 0 0.33 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 12 NA NA 0 0 140 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.07 NA NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 13 49628024 49753059 1 1 140 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 29.44 0 100 0 2 NA Whitelist SKCM-US 0.62 0.26 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 14 79339589 79614759 1 1 140 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 29.44 98.83 0.26 0 1 2 Whitelist SKCM-US 0.62 0.33 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 15 33073711 33425696 1 1 140 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 29.44 0.34 99.66 0 1 2 Whitelist SKCM-US 0.62 0.41 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 16 50166190 50213659 1 1 140 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.44 0 99.9 3 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 17 59195864 61406418 3 3 140 0 1 1 1 0 0.8 0.11 3 0 0 NA NA NA 5 3 3 29.44 76.39 23.58 0 3 4 Whitelist SKCM-US 0.87 0.28 0 0 0.84 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 18 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 19 21224833 21376291 1 1 140 1 0 0 0 0 0.39 0.76 2 NA NA NA NA NA NA NA NA 29.44 0.26 99.28 1 1 2 Whitelist SKCM-US 0.62 0.92 NA NA 0.59 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 20 2824957 48714961 1 2 140 2 0 0 0 0 0.11 0.77 4 NA 0.04 4 4 4 5 5 5 29.44 0.11 98.9 8 1 2 Whitelist SKCM-US 0.54 0.93 NA 0.04 0.48 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 21 NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 22 29683567 49998524 8 12 140 3 2 1 2 4 0.8 0 16 0 0 16 16 16 20 19 19 29.44 3.27 95.81 0 2 3 Whitelist SKCM-US 9 0.93 0 0 0 0.84 0 High confidence SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma Canonical without polyploidization 20 0.07 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::40e17bf8-6c19-4e5e-b60d-ad54f504a970 X NA NA 0 0 140 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 40e17bf8-6c19-4e5e-b60d-ad54f504a970 SKCM 0.76 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37409 TCGA-DA-A1HY 40e17bf8-6c19-4e5e-b60d-ad54f504a970 male alive C77.9 42 NA 3199 NA Included Skin-Melanoma SKCM US 0 105.23 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 1 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 2 NA NA 0 0 100 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.07 NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 3 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 4 111514164 118890985 2 2 100 1 1 0 0 0 0.57 0.07 3 NA 0 NA NA NA 5 5 5 19.34 0.34 99.63 7 3 2 Whitelist SKCM-US 0.68 0.2 NA 0 0.64 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 4 0.02 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 5 165252562 165738070 2 2 100 0 0 1 1 0 0.57 0.09 2 NA 0 NA NA NA NA NA NA 19.34 0.25 99.61 14 1 2 Whitelist SKCM-US 0.68 0.26 NA 0 0.64 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 4 0.02 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 6 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 7 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 8 60910863 74776226 54 61 100 14 13 14 13 7 0.99 0 29 0 0 29 3 5 42 3 5 19.34 67.04 29.54 60 8 10 Whitelist SKCM-US 1 0 0 0 1 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 115 0.57 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 9 71676235 74531739 1 1 100 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA NA NA NA 19.34 2.02 97.27 0 2 3 Whitelist SKCM-US 0.62 0.19 0 NA 0.59 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 10 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 11 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 12 30481111 30491296 1 1 100 1 0 0 0 0 0.39 0.09 1 NA NA NA NA NA NA NA NA 19.34 0 99.92 0 2 NA Whitelist SKCM-US 0.62 0.26 NA NA 0.59 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 13 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 14 47820429 48072508 1 1 100 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 4 3 4 19.34 55.18 43.91 1 3 NA Whitelist SKCM-US 0.62 1 0 NA 0.59 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 15 80015829 102381091 1 2 100 1 1 0 0 0 0.57 0.76 3 0 0 NA NA NA 4 0 3 19.34 24.43 75.42 1 0 6 Whitelist SKCM-US 0.68 0.92 0 0 0.64 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 4 0.02 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 16 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 17 4340582 80433212 1 6 100 0 3 0 1 2 0.11 0.05 10 0 0 10 10 10 12 11 11 19.34 12.6 87.27 1 2 3 Whitelist SKCM-US 0.68 0.17 0 0 0.48 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 10 0.05 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 18 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 19 948338 1615828 1 1 100 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 19.34 1.13 98.7 0 2 3 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 20 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 21 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 22 NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::4cdb18f5-47bf-475f-b34c-fa4912515268 X NA NA 0 0 100 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 4cdb18f5-47bf-475f-b34c-fa4912515268 SKCM 0.82 2.17 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37703 TCGA-FS-A1ZP 4cdb18f5-47bf-475f-b34c-fa4912515268 male deceased C77.9 52 2273 NA NA Included Skin-Melanoma SKCM US 1 74.77 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 1 145684513 247510948 36 36 178 9 11 8 8 0 0.88 0 77 0 0 77 11 43 84 11 15 74.85 99.93 0.07 7 6 4 Whitelist SKCM-US 0.93 0 0 0 0.91 0 High confidence SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma With other complex events 72 0.2 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 2 80760359 238826100 1 2 178 0 1 0 1 0 0.57 0 5 NA 0 5 5 5 5 5 5 74.85 99.59 0.3 6 3 2 Whitelist SKCM-US 0.68 0 NA 0 0.64 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 3 21980018 34180207 1 2 178 2 0 0 0 0 0.11 0.03 1 0 0 NA NA NA 4 3 3 74.85 99.88 0 0 3 NA Whitelist SKCM-US 0.54 0.1 0 0 0.48 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 4 93463422 177241256 1 3 178 2 1 0 0 0 0.3 0 8 0 0 8 3 5 9 3 5 74.85 99.74 0.24 6 3 2 Whitelist SKCM-US 0.62 0.02 0 0 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 6 0.02 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 5 NA NA 0 0 178 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.08 NA NA NA 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 6 49240985 49268682 1 1 178 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 7 4 4 74.85 34.27 62.58 0 2 3 Whitelist SKCM-US 0.62 0.05 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 7 1058716 115310886 1 3 178 2 0 1 0 0 0.3 0.32 14 0 0 14 4 7 15 5 7 74.85 97.43 0 9 5 3 Whitelist SKCM-US 0.62 0.57 0 0 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 6 0.02 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 8 24889611 63630843 1 2 178 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 74.85 99.99 0 5 3 4 Whitelist SKCM-US 0.54 0.04 NA 0 0.48 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 9 104758632 105346476 1 1 178 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA 5 5 5 74.85 0.76 98.54 0 1 2 Whitelist SKCM-US 0.62 0.05 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 10 2058526 123926554 1 3 178 3 0 0 0 0 0.03 0.15 4 0 0 4 4 4 6 6 6 74.85 3.88 95.95 6 1 2 Whitelist SKCM-US 0.41 0.36 0 0 0.33 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 6 0.02 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 11 92304531 92672292 1 1 178 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA NA NA NA 74.85 0.27 99.3 0 1 2 Whitelist SKCM-US 0.62 0.08 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 12 74878108 74890684 1 1 178 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA 6 3 3 74.85 99.92 0 0 1 4 Whitelist SKCM-US 0.62 0.21 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 13 103102579 103626991 1 1 178 1 0 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 74.85 99.54 0.46 0 2 3 Whitelist SKCM-US 0.62 0.13 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 14 82993276 83011778 1 1 178 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 5 3 3 74.85 1.25 95.04 0 1 2 Whitelist SKCM-US 0.62 0.16 NA NA 0.59 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 2 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 15 45003571 101242417 50 68 178 19 11 10 10 18 0.21 0 74 0 0 74 9 15 75 9 15 74.85 89.09 10.91 0 2 3 Whitelist SKCM-US 1 0.66 0 0 0 0.59 0 High confidence SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma With other complex events 118 0.33 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 16 NA NA 0 0 178 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 17 NA NA 0 0 178 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.26 NA NA NA 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 18 50573227 52050998 1 2 178 2 0 0 0 0 0.11 0.64 4 0 0 4 4 4 7 7 7 74.85 99.96 0 1 3 4 Whitelist SKCM-US 0.54 0.85 0 0 0.48 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 19 46345042 46470624 2 2 178 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 11 6 6 74.85 42.2 50.43 1 1 2 Whitelist SKCM-US 0.68 0 0 0 0.64 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 20 13434313 53925106 1 2 178 2 0 0 0 0 0.11 0.6 2 NA 0 NA NA NA NA NA NA 74.85 99.01 0 2 3 4 Whitelist SKCM-US 0.54 0.81 NA 0 0.48 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 4 0.01 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 21 NA NA 0 0 178 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.91 NA NA NA 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 22 NA NA 0 0 178 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 SKCM-US::5bc515c8-7727-4d69-98e9-31bbcb748550 X 92816571 93649590 26 26 178 8 7 6 5 0 0.86 0 18 0 0 18 14 16 24 16 18 74.85 99.38 0.39 2 2 3 Whitelist SKCM-US 0.92 0 0 0 0.9 0 No SKCM-US 5bc515c8-7727-4d69-98e9-31bbcb748550 SKCM 0.47 3.2 Skin-Melanoma NA 52 0.15 NA 4 SKCM-US DO37861 TCGA-GN-A26A 5bc515c8-7727-4d69-98e9-31bbcb748550 female deceased C44.5 63 988 NA NA Included Skin-Melanoma SKCM US 1 32.5 False positive; manually removed SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 1 NA NA 0 0 160 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA 9 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.78 0 NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 2 15930327 35023336 2 2 160 1 1 0 0 0 0.57 0.67 5 0 0 5 5 5 9 9 9 38.46 8.67 91.23 0 2 1 Whitelist SKCM-US 0.68 0.87 0 0 0.64 0 Linked to high confidence SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma Canonical without polyploidization 4 0.01 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 3 81208042 140376909 6 6 160 1 1 2 2 0 0.88 0 6 0 0 6 6 6 14 7 7 38.46 11.64 88.22 0 1 2 Whitelist SKCM-US 0.93 0.03 0 0 0.91 0 Low confidence SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma Canonical without polyploidization 12 0.04 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 4 45711578 183166779 1 18 160 5 2 1 2 8 0.31 0 19 0 0 19 5 13 19 5 6 38.46 70.05 29.85 4 2 3 Whitelist SKCM-US 10 0.62 0.02 0 0 0.59 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 28 0.09 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 5 30506155 43234307 1 1 160 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 38.46 7.04 92.82 2 1 2 Whitelist SKCM-US 0.62 0.03 NA NA 0.59 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 6 80713179 118504284 9 13 160 4 3 1 1 4 0.39 0.01 7 0 0 7 7 7 13 13 13 38.46 0.28 96.9 1 2 1 Whitelist SKCM-US 2 0.68 0.05 0 0 0.59 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 22 0.07 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 False positive; manually removed SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 7 NA NA 0 0 160 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 8 93008531 93189600 2 2 160 0 0 1 1 0 0.57 0.2 2 0 0 NA NA NA 16 5 6 38.46 67.14 29.44 5 3 4 Whitelist SKCM-US 0.68 0.43 0 0 0.64 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 9 663880 36723261 1 3 160 1 0 1 0 1 0.57 0.22 2 NA 0 NA NA NA 5 5 5 38.46 30.88 68.39 1 1 2 Whitelist SKCM-US 0.87 0.46 NA 0 0.64 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 5 0.02 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 10 44843350 88556740 1 6 160 1 1 0 0 4 0.57 0 8 0 0 8 5 7 13 5 5 38.46 99.28 0.55 0 3 1 Whitelist SKCM-US 0.68 0.01 0 0 0.64 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 8 0.02 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 11 30885500 99014655 1 20 160 2 1 1 1 15 0.9 0 14 0 0 14 3 3 17 3 3 38.46 77.17 22.41 2 1 17 Whitelist SKCM-US 10_20 0.66 0 0 0 0.92 0 Linked to high confidence SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma With other complex events 25 0.08 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 12 NA NA 0 0 160 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.32 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 13 49273742 50673474 1 1 160 1 0 0 0 0 0.39 0.83 2 0 NA NA NA NA 5 3 5 38.46 99.5 0.5 0 1 3 Whitelist SKCM-US 0.62 0.97 0 NA 0.59 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 14 NA NA 0 0 160 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist SKCM-US NA 0.74 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 15 33291544 54898190 1 3 160 2 1 0 0 0 0.3 0.81 6 0 0 6 3 6 7 3 3 38.46 0.9 98.98 0 2 1 Whitelist SKCM-US 0.62 0.95 0 0 0.59 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 16 NA NA 0 0 160 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.33 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 17 29284811 33228035 1 2 160 1 1 0 0 0 0.57 1 3 0 0 NA NA NA 6 3 3 38.46 63.38 32.19 0 1 2 Whitelist SKCM-US 0.68 1 0 0 0.64 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 18 69402625 77693227 10 20 160 1 4 3 2 10 0.57 0 20 0 0 20 20 20 20 20 20 38.46 3.21 96.26 0 1 2 Whitelist SKCM-US 2_3_6 0.68 0 0 0 0.64 0 High confidence SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma Canonical without polyploidization 30 0.09 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 19 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 20 40210929 55897885 12 14 160 4 3 2 3 2 0.88 0 16 0 0 16 14 16 27 15 15 38.46 98.99 0.03 0 3 5 Whitelist SKCM-US 0.9 0 0 0 0.91 0 High confidence SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma After polyploidization 26 0.08 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 21 NA NA 0 0 160 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 22 NA NA 0 0 160 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 X NA NA 0 0 160 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.1 NA NA NA 0 No SKCM-US 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 SKCM 0.86 1.94 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37587 TCGA-ER-A19L 5f6df69c-4ebf-4811-8b28-ad393dfbe1a3 male deceased C49.5 35 4000 NA NA Included Skin-Melanoma SKCM US 1 131.58 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 1 18599327 18613036 1 1 305 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 28.43 49.65 50.17 0 2 NA Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 2 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 3 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 4 NA NA 0 0 305 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 5 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 6 53800427 56369784 3 3 305 0 1 1 1 0 0.8 0 7 0 0 7 7 7 13 10 13 28.43 33.8 63.36 4 4 3 Whitelist SKCM-US 0.87 0 0 0 0.84 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 6 0.01 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 7 158452719 158549362 1 1 305 1 0 0 0 0 0.39 0 2 0 NA NA NA NA 5 3 3 28.43 77.61 22.16 13 4 5 Whitelist SKCM-US 0.62 0.01 0 NA 0.59 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 8 82041861 82159396 1 2 305 0 1 0 1 0 0.57 0 2 0 0 NA NA NA 7 4 4 28.43 62.91 36.97 5 4 5 Whitelist SKCM-US 0.68 0.02 0 0 0.64 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 9 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 10 NA NA 0 0 305 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 11 108311453 108396357 1 1 305 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 28.43 0.07 99.5 3 1 2 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 12 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 13 NA NA 0 0 305 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 14 NA NA 0 0 305 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 15 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 16 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 17 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 18 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 19 969992 20616012 269 271 305 79 69 58 63 2 0.3 0 211 0 0 211 11 14 211 11 14 28.43 94.2 5.36 4 2 3 Whitelist SKCM-US 0.62 0 0 0 0.59 1 High confidence SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma With other complex events 540 0.89 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 20 NA NA 0 0 305 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 21 NA NA 0 0 305 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.42 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 22 NA NA 0 0 305 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.81 NA NA NA 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 X 128538449 128824511 1 1 305 1 0 0 0 0 0.39 0 1 0 NA NA NA NA NA NA NA 28.43 100 0 0 1 NA Whitelist SKCM-US 0.62 0.02 0 NA 0.59 1 No SKCM-US 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 SKCM 0.56 2.15 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37719 TCGA-DA-A1I0 68f75ab5-9d77-40c5-a8ce-f56016bbe9e4 male alive C44.9 63 NA 215 NA Included Skin-Melanoma SKCM US 0 7.07 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 1 26122546 240587165 1 11 245 5 2 0 0 4 0.02 0.15 15 0 0 15 3 5 15 3 5 70.02 96.2 0.59 23 3 1 Whitelist SKCM-US 4 0.62 0.36 0 0 0.33 1 Linked to high confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma With other complex events 18 0.04 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 2 182474699 242863436 27 28 245 7 6 8 6 1 0.94 0 47 0 0 47 42 47 58 43 43 70.02 43.07 54.26 6 2 3 Whitelist SKCM-US 0.98 0 0 0 0.96 1 High confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma Canonical without polyploidization 55 0.11 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 3 94323340 194333621 1 2 245 2 0 0 0 0 0.11 0 5 NA 0 5 3 5 6 4 4 70.02 44.53 52.11 0 2 1 Whitelist SKCM-US 0.54 0 NA 0 0.48 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 4 176289985 190678345 9 9 245 2 2 2 3 0 0.95 1 18 0 0 18 18 18 30 25 25 70.02 99.72 0.1 0 3 4 Whitelist SKCM-US 0.97 1 0 0 0.97 1 High confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma After polyploidization 18 0.04 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 5 253936 44452670 52 86 245 11 14 13 14 34 0.93 0 67 0 0 67 7 25 69 7 8 70.02 88.05 9.27 7 4 3 Whitelist SKCM-US 16 0.87 0 0 0 0.95 1 High confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma With other complex events 138 0.28 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 6 52090286 66533644 2 3 245 1 0 1 0 1 0.57 0.89 8 0 0 8 3 4 19 3 5 70.02 33.97 62.78 0 2 5 Whitelist SKCM-US 0.62 1 0 0 0.64 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 5 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 7 136178683 136389911 2 3 245 0 0 1 1 1 0.57 1 3 0 0 NA NA NA 15 5 9 70.02 99.77 0.01 0 5 4 Whitelist SKCM-US 0.62 1 0 0 0.64 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 5 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 8 112499134 113081279 1 3 245 0 1 1 0 1 0.57 0.77 1 0 0 NA NA NA 5 3 3 70.02 67.14 29.44 0 3 NA Whitelist SKCM-US 0.62 0.93 0 0 0.64 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 5 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 9 NA NA 0 0 245 0 0 0 0 0 NA 0.51 NA 0 NA NA NA NA 7 3 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.75 0 NA NA 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 10 NA NA 0 0 245 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 11 49654668 56498706 6 10 245 1 2 2 1 4 0.88 0 7 0 0 7 5 7 18 8 13 70.02 56.94 42.63 0 1 4 Whitelist SKCM-US 0.86 0.01 0 0 0.91 1 Low confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma Before polyploidization 16 0.03 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 12 39074262 109165266 1 3 245 1 2 0 0 0 0.3 0.02 6 0 0 6 3 5 7 3 3 70.02 87.44 8.23 0 3 2 Whitelist SKCM-US 0.62 0.09 0 0 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 6 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 13 20542519 20557445 1 1 245 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 70.02 98.58 1.42 0 3 NA Whitelist SKCM-US 0.62 0.36 NA NA 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 14 31322016 34532228 1 2 245 0 0 1 1 0 0.57 1 5 0 0 5 3 5 13 4 7 70.02 10.11 88.97 0 3 2 Whitelist SKCM-US 0.68 1 0 0 0.64 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 15 38589150 100221383 1 4 245 2 1 0 0 1 0.3 1 6 0 0 6 3 4 7 3 4 70.02 67.58 32.25 0 2 4 Whitelist SKCM-US 0.68 1 0 0 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 7 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 16 63130093 68046857 2 8 245 0 0 2 2 4 0.26 0 8 0 0 8 5 5 30 9 9 70.02 85.26 14.7 1 3 1 Whitelist SKCM-US 5 0.68 0 0 0 0.59 1 Linked to high confidence SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma Canonical without polyploidization 12 0.02 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 17 28060655 28203607 1 1 245 1 0 0 0 0 0.39 0.23 1 NA NA NA NA NA NA NA NA 70.02 100 0 0 3 NA Whitelist SKCM-US 0.62 0.47 NA NA 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 18 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 19 3988857 5894279 1 1 245 0 1 0 0 0 0.39 0.64 2 NA NA NA NA NA 4 0 3 70.02 99.83 0 0 3 5 Whitelist SKCM-US 0.62 0.85 NA NA 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 20 4597919 5212706 1 1 245 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA 4 0 4 70.02 99.03 0 0 4 5 Whitelist SKCM-US 0.62 0.41 NA NA 0.59 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 21 45459128 45667676 3 3 245 1 0 1 1 0 0.8 0.23 3 0 0 NA NA NA 5 5 5 70.02 76.78 0.57 7 3 2 Whitelist SKCM-US 0.87 0.47 0 0 0.84 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 6 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 22 NA NA 0 0 245 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::76cc1d42-acec-46b3-9663-5e4de2550353 X 33105618 133513947 1 2 245 2 0 0 0 0 0.11 0 1 NA 0 NA NA NA NA NA NA 70.02 100 0 0 1 NA Whitelist SKCM-US 0.54 0 NA 0 0.48 1 No SKCM-US 76cc1d42-acec-46b3-9663-5e4de2550353 SKCM 0.83 2.94 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37527 TCGA-GN-A264 76cc1d42-acec-46b3-9663-5e4de2550353 male deceased C44.5 60 3587 NA NA Included Skin-Melanoma SKCM US 1 117.99 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 1 57268038 116153671 21 38 137 6 6 5 4 17 0.91 0 46 0 0 46 6 18 51 6 7 85.69 100 0 25 5 4 Whitelist SKCM-US 0.95 0 0 0 0.94 1 Low confidence SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma With other complex events 59 0.22 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 2 6882808 163919167 1 4 137 2 0 0 0 2 0.11 0.02 2 0 0 NA NA NA NA NA NA 85.69 99.89 0 4 4 6 Whitelist SKCM-US 0.54 0.08 0 0 0.48 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 6 0.02 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 3 118794500 119255478 1 1 137 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 85.69 99.88 0 0 1 5 Whitelist SKCM-US 0.62 0.03 NA NA 0.59 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 2 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 4 93443719 190599266 1 6 137 4 0 0 0 2 0.01 0.73 7 0 0 7 7 7 9 8 9 85.69 99.68 0 0 4 5 Whitelist SKCM-US X 0.54 0.91 0 0 0.16 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 10 0.04 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 5 60597779 67947848 2 2 137 0 0 1 1 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 85.69 99.87 0 0 5 NA Whitelist SKCM-US 0.68 0.16 NA 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 6 1287488 1655841 1 1 137 0 1 0 0 0 0.39 0.36 2 0.6 NA NA NA NA 7 5 5 85.69 99.86 0 0 3 4 Whitelist SKCM-US 0.62 0.62 0.6 NA 0.59 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 2 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 7 95206491 98354767 2 2 137 0 0 1 1 0 0.57 1 1 0 0 NA NA NA 7 5 5 85.69 97.45 0 5 7 NA Whitelist SKCM-US 0.68 1 0 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 8 99260946 99288341 1 1 137 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 85.69 99.7 0 1 5 NA Whitelist SKCM-US 0.62 0.38 NA NA 0.59 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 2 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 9 13330925 21974221 2 2 137 0 0 1 1 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 85.69 99.84 0 0 3 NA Whitelist SKCM-US 0.68 0.4 NA 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 10 118612608 119056626 2 2 137 0 0 1 1 0 0.57 0.22 1 0 0 NA NA NA NA NA NA 85.69 0.03 99.79 0 2 NA Whitelist SKCM-US 0.68 0.45 0 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 11 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 12 NA NA 0 0 137 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.27 NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 13 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 14 38346230 59483785 2 2 137 0 0 1 1 0 0.57 1 1 0 0 NA NA NA NA NA NA 85.69 59.46 24.89 0 4 NA Whitelist SKCM-US 0.68 1 0 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 15 24191188 24203768 1 1 137 0 0 0 1 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 85.69 99.85 0 0 4 NA Whitelist SKCM-US 0.62 0.41 NA NA 0.59 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 2 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 16 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 17 52283568 77511259 3 22 137 1 2 1 2 16 0.88 0 28 0 0 28 4 11 35 4 9 85.69 97.89 2.1 5 4 3 Whitelist SKCM-US 1 0.89 0 0 0 0.91 1 Linked to low confidence SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma With other complex events 28 0.1 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 18 61828848 62396148 1 2 137 1 0 0 0 1 0.39 0.59 2 NA NA NA NA NA NA NA NA 85.69 99.94 0 0 3 4 Whitelist SKCM-US 0.68 0.81 NA NA 0.59 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 3 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 19 33508713 33566983 2 2 137 0 0 1 1 0 0.57 1 1 NA 0 NA NA NA NA NA NA 85.69 99.83 0 0 3 NA Whitelist SKCM-US 0.68 1 NA 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 20 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 21 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba 22 17566971 21445273 5 6 137 2 0 1 2 1 0.53 0 16 0 0 16 3 4 17 3 3 85.69 87.89 0 0 14 8 Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma NA 11 0.04 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7b92fcd4-f9be-4b97-94a2-b2e8348aeaba X 118264440 146947067 12 16 137 5 0 3 4 4 0.2 0 20 0 0 20 7 14 21 7 14 85.69 8.31 91.46 0 2 4 Whitelist SKCM-US 0.79 0 0 0 0.59 1 High confidence SKCM-US 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba SKCM 0.67 4.4 Skin-Melanoma With other complex events 28 0.1 NA 5 SKCM-US DO37424 TCGA-DA-A1I8 7b92fcd4-f9be-4b97-94a2-b2e8348aeaba female alive C44.9 63 NA 999 NA Included Skin-Melanoma SKCM US 0 32.86 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 1 149816333 248002432 52 70 201 13 15 12 12 18 0.93 0 91 0 0 91 10 19 98 10 12 78.18 100 0 6 5 6 Whitelist SKCM-US 11_7 0.87 0 0 0 0.95 1 High confidence SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma With other complex events 122 0.3 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 2 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 3 120763840 170508368 8 12 201 3 1 1 3 4 0.57 0 19 0 0 19 5 5 26 6 6 78.18 78.87 21.1 4 3 2 Whitelist SKCM-US 0.68 0 0 0 0.64 1 Low confidence SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma With other complex events 20 0.05 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 4 44369963 182426384 1 4 201 1 2 1 0 0 0.57 0 6 0 0 6 5 6 7 5 5 78.18 99.89 0 0 4 3 Whitelist SKCM-US 0.68 0.02 0 0 0.64 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 8 0.02 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 5 NA NA 0 0 201 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 6 57905956 165922937 1 15 201 5 1 1 2 6 0.19 0.37 23 0 0 23 7 11 24 7 7 78.18 43.25 53.92 0 2 3 Whitelist SKCM-US 3 0.54 0.62 0 0 0.59 1 Linked to low confidence SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma With other complex events 24 0.06 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 7 61559135 158613296 26 57 201 6 4 8 8 31 0.64 0 49 0 0 49 10 11 49 10 10 78.18 50.33 47.1 3 2 3 Whitelist SKCM-US 1_11_3 0.97 0 0 0 0.71 1 High confidence SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma With other complex events 83 0.21 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 8 127885403 130700528 6 6 201 2 1 2 1 0 0.88 0 5 0 0 5 0 3 22 5 5 78.18 96.58 0 0 9 5 Whitelist SKCM-US 0.93 0 0 0 0.91 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 12 0.03 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 9 27589057 28220798 1 2 201 0 0 1 1 0 0.57 0.03 2 NA 0 NA NA NA NA NA NA 78.18 99.3 0 0 3 4 Whitelist SKCM-US 0.68 0.1 NA 0 0.64 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 10 NA NA 0 0 201 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 11 5892683 117914383 5 15 201 3 0 2 0 10 0.14 0 30 0 0 30 8 24 32 8 13 78.18 59.54 40.04 0 3 2 Whitelist SKCM-US 1_7 0.62 0 0 0 0.59 1 High confidence SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma With other complex events 20 0.05 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 12 NA NA 0 0 201 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 13 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 14 74904209 74919575 1 1 201 1 0 0 0 0 0.39 0.02 1 NA NA NA NA NA NA NA NA 78.18 99.09 0 0 3 NA Whitelist SKCM-US 0.62 0.09 NA NA 0.59 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 15 83236603 83305257 1 1 201 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA NA NA NA 78.18 99.81 0.07 0 2 3 Whitelist SKCM-US 0.62 0.16 NA NA 0.59 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 16 NA NA 0 0 201 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.41 NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 17 NA NA 0 0 201 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA 6 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.41 NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 18 2952799 3520449 1 1 201 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 4 3 3 78.18 99.96 0 0 4 5 Whitelist SKCM-US 0.62 0.63 NA NA 0.59 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 19 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 20 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 21 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe 22 NA NA 0 0 201 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::7ce09a09-074e-4f38-bed7-98ab34347fbe X 112520290 112531079 1 1 201 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 78.18 99.76 0.01 0 2 3 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 7ce09a09-074e-4f38-bed7-98ab34347fbe SKCM 0.88 3.45 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37723 TCGA-FS-A1ZU 7ce09a09-074e-4f38-bed7-98ab34347fbe female deceased C44.9 70 808 NA NA Included Skin-Melanoma SKCM US 1 26.58 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 1 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 2 32129440 88367600 17 34 337 4 4 5 4 17 0.98 0 23 0 0 23 8 14 28 9 15 63.6 69.08 28.2 4 2 4 Whitelist SKCM-US 0.97 0.01 0 0 0.99 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 51 0.08 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 3 69695493 193847204 29 67 337 4 10 5 10 38 0.24 0 76 0 0 76 8 17 78 8 17 63.6 56.11 43.74 13 4 2 Whitelist SKCM-US 15_7 0.8 0 0 0 0.59 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 96 0.14 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 4 58983388 104017952 15 18 337 6 2 3 4 3 0.51 0.16 29 0 0 29 8 9 36 8 8 63.6 16.18 81.37 3 4 2 Whitelist SKCM-US 0.68 0.36 0 0 0.64 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 33 0.05 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 5 30198805 59624606 1 3 337 1 1 0 0 1 0.57 0 6 0 0 6 3 4 7 4 5 63.6 24.74 75.14 4 2 4 Whitelist SKCM-US 0.62 0 0 0 0.64 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 5 0.01 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 6 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 7 112828 25746190 15 62 337 3 3 5 4 47 0.87 0 56 0 0 56 8 9 61 8 9 63.6 76.25 21.05 4 5 3 Whitelist SKCM-US 15_3 0.82 0 0 0 0.9 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 77 0.11 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 8 81659260 82251439 1 1 337 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 63.6 99.99 0 6 4 5 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 9 4150123 100761879 2 10 337 0 0 0 2 8 0.11 0.2 13 0 0 13 4 11 19 5 13 63.6 70.97 28.89 2 3 1 Whitelist SKCM-US 3_7 0.68 0.43 0 0 0.48 1 Linked to high confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 12 0.02 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 10 NA NA 0 0 337 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 11 14627440 19120746 44 53 337 8 14 10 12 9 0.61 0 48 0 0 48 11 29 65 11 11 63.6 32.51 67.06 0 4 2 Whitelist SKCM-US 15 0.67 0 0 0 0.69 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 97 0.14 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 12 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 13 95920755 101115282 1 1 337 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 4 4 63.6 100 0 2 3 4 Whitelist SKCM-US 2 0.62 0.07 NA NA 0.59 1 Linked to high confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 2 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 14 NA NA 0 0 337 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.02 NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 15 60170393 102151415 23 81 337 3 7 6 7 58 0.6 0 80 0 0 80 7 7 81 7 7 63.6 32.2 67.67 1 6 8 Whitelist SKCM-US 11_3_7 0.75 0 0 0 0.67 1 High confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 104 0.15 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 16 17199755 28285873 18 34 337 6 5 3 4 16 0.77 0 13 0 0 13 3 8 19 4 6 63.6 7.1 87.16 1 5 2 Whitelist SKCM-US 2 0.93 0 0 0 0.84 1 Linked to high confidence SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma With other complex events 52 0.08 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 17 11330170 11381035 1 1 337 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 63.6 0.06 99.92 0 2 3 Whitelist SKCM-US 0.62 0.05 NA NA 0.59 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 2 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 18 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 19 NA NA 0 0 337 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.68 NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 20 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 21 NA NA 0 0 337 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 22 NA NA 0 0 337 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.7 NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::800d3a17-269f-4d97-94ff-8585f20038d8 X NA NA 0 0 337 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 800d3a17-269f-4d97-94ff-8585f20038d8 SKCM 0.51 3.31 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7579329_C_T,CN:2 4 SKCM-US DO38129 TCGA-DA-A1HW 800d3a17-269f-4d97-94ff-8585f20038d8 female alive C77.9 37 NA 59 NA Included Skin-Melanoma SKCM US 0 1.94 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 1 205013349 205296080 1 1 57 0 1 0 0 0 0.39 1 2 0 0 NA NA NA NA NA NA 26.23 0.11 99.89 0 2 3 Whitelist SKCM-US 0.62 1 0 0 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 2 NA NA 0 0 57 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.47 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 3 33481183 161212070 1 2 57 1 0 1 0 0 0.57 0.29 5 0.04 0 5 5 5 5 5 5 26.23 5.89 94.08 22 2 1 Whitelist SKCM-US 0.68 0.54 0.04 0 0.64 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 4 152830995 152956239 1 1 57 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 26.23 0.07 99.92 13 2 3 Whitelist SKCM-US 0.62 0.81 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 5 64331749 155370835 1 2 57 1 1 0 0 0 0.57 0.17 4 0 0 4 4 4 6 5 5 26.23 75.72 21.62 13 1 2 Whitelist SKCM-US 0.68 0.39 0 0 0.64 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 6 89466188 158235277 13 13 57 3 3 4 3 0 0.97 0 21 0 0 21 15 21 26 16 16 26.23 52.19 47.66 6 2 1 Whitelist SKCM-US 0.99 0 0 0 0.98 1 High confidence SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma Canonical without polyploidization 26 0.23 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 7 140475473 155896806 1 1 57 1 0 0 0 0 0.39 0.55 2 0.01 NA NA NA NA NA NA NA 26.23 90.08 9.69 8 2 3 Whitelist SKCM-US 0.62 0.78 0.01 NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 8 121428465 121777722 2 2 57 0 0 2 0 0 0.11 0.54 1 NA 0 NA NA NA NA NA NA 26.23 0 99.99 9 2 NA Whitelist SKCM-US 0.54 0.77 NA 0 0.48 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 9 27319498 28177138 1 1 57 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 26.23 98.69 0.61 0 1 2 Whitelist SKCM-US 0.62 0.9 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 10 3917754 20672449 1 3 57 1 0 1 1 0 0.8 0.19 1 0 0 NA NA NA NA NA NA 26.23 34.18 65.64 1 2 NA Whitelist SKCM-US 0.87 0.41 0 0 0.84 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 6 0.05 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 11 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 12 NA NA 0 0 57 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 13 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 14 68884326 70792464 1 1 57 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.23 0 96.3 1 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 15 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 16 2751057 31752334 1 1 57 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.23 46.88 53.01 2 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 17 38448229 38520335 1 1 57 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.23 0 100 0 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 18 68385499 68401082 1 1 57 1 0 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 26.23 0 99.94 6 2 NA Whitelist SKCM-US 0.62 0.87 NA NA 0.59 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 19 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 20 NA NA 0 0 57 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 21 NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 22 NA NA 0 0 57 0 0 0 0 0 NA 0.15 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.35 NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::81cedb9e-ee43-476b-9ed9-8d0fdb346065 X NA NA 0 0 57 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 81cedb9e-ee43-476b-9ed9-8d0fdb346065 SKCM 0.38 1.88 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37439 TCGA-EE-A2A0 81cedb9e-ee43-476b-9ed9-8d0fdb346065 female deceased C77.4 77 1424 NA NA Included Skin-Melanoma SKCM US 1 46.84 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 1 7068840 120031293 77 102 219 20 21 18 18 25 0.95 0 42 0 0 42 12 19 44 12 19 29.96 68.07 31.93 0 2 3 Whitelist SKCM-US 8_9 0.99 0 0 0 0.97 1 High confidence SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma With other complex events 179 0.41 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 2 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 3 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 4 NA NA 0 0 219 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 5 95543745 96056694 1 1 219 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 29.96 0.28 99.58 0 2 3 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 6 103771688 104216057 1 1 219 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 29.96 0.26 99.59 0 2 3 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 7 9166194 9936254 1 2 219 0 2 0 0 0 0.11 0.02 3 0.02 0 NA NA NA 4 0 3 29.96 99.8 0 0 3 4 Whitelist SKCM-US 0.54 0.07 0.02 0 0.48 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 8 19835544 144243959 55 90 219 16 12 15 12 35 0.82 0 43 0 0 43 9 18 43 9 9 29.96 86.21 10.26 17 3 4 Whitelist SKCM-US 1_9 0.96 0 0 0 0.86 1 High confidence SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma With other complex events 145 0.33 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 9 72055003 138463855 5 38 219 2 1 2 0 33 0.53 0 8 0 0 8 8 8 12 10 10 29.96 62.33 37.5 0 1 2 Whitelist SKCM-US 1_8 0.95 0 0 0 0.64 1 High confidence SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma Canonical without polyploidization 43 0.1 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 10 89533391 89712541 1 1 219 1 0 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 29.96 99.82 0 0 0 1 Whitelist SKCM-US 0.62 0.01 NA NA 0.59 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 11 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 12 NA NA 0 0 219 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.06 NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 13 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 14 NA NA 0 0 219 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.39 NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 15 33139197 33184510 1 1 219 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 29.96 0.04 99.84 0 2 3 Whitelist SKCM-US 0.62 0.13 NA NA 0.59 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 16 69642549 69689811 2 8 219 1 0 1 0 6 0.57 0 1 0 0 NA NA NA 7 7 7 29.96 0.61 99.29 0 2 NA Whitelist SKCM-US 1 0.87 0 0 0 0.64 1 Linked to high confidence SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma With other complex events 10 0.02 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 17 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 18 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 19 NA NA 0 0 219 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.33 NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 20 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 21 NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee 22 45597460 45928474 1 1 219 1 0 0 0 0 0.39 0.75 2 NA NA NA NA NA 4 3 3 29.96 99.35 0.65 0 2 3 Whitelist SKCM-US 0.62 0.92 NA NA 0.59 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 2 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::85400bf1-23e0-4e0f-8df7-f0d108641aee X NA NA 0 0 219 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 85400bf1-23e0-4e0f-8df7-f0d108641aee SKCM 0.91 2.02 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37427 TCGA-D3-A3MO 85400bf1-23e0-4e0f-8df7-f0d108641aee male deceased C49.4 47 284 NA NA Included Skin-Melanoma SKCM US 1 9.34 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 1 48931843 48973948 2 2 351 0 0 1 1 0 0.57 0 4 0 0 4 4 4 16 7 7 60.94 88.41 11.59 0 2 3 Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 2 11761317 204123967 1 10 351 4 5 0 0 1 0.03 0 14 0 0 14 6 14 15 7 7 60.94 99.91 0 1 4 5 Whitelist SKCM-US 0.3 0.01 0 0 0.33 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 19 0.03 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 3 10265705 127702567 1 3 351 1 2 0 0 0 0.3 0 6 0 0 6 3 6 7 3 3 60.94 99.11 0.86 0 3 4 Whitelist SKCM-US 0.62 0 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 4 1723106 138482726 1 4 351 2 2 0 0 0 0.26 0 8 0 0 8 4 6 9 5 7 60.94 0.35 99.54 0 2 3 Whitelist SKCM-US 0.62 0 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 8 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 5 NA NA 0 0 351 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 6 88873311 102960660 3 10 351 1 2 0 0 7 0.3 0.5 4 0 0 4 4 4 12 7 10 60.94 36.07 61.03 0 2 3 Whitelist SKCM-US 0.68 0.74 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 13 0.02 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 7 875099 105793529 1 5 351 3 2 0 0 0 0.14 0.02 9 0 0 9 5 9 9 5 9 60.94 99.78 0 0 5 4 Whitelist SKCM-US 0.62 0.07 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 10 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 8 27003357 144300868 70 84 351 23 15 18 14 14 0.42 0 41 0 0 41 6 11 62 6 11 60.94 74.71 21.48 0 7 6 Whitelist SKCM-US 0.63 0 0 0 0.63 1 Low confidence SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma With other complex events 154 0.22 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 9 4969264 101805070 1 2 351 1 1 0 0 0 0.57 0 4 0.01 0.03 4 3 4 5 3 3 60.94 14.59 84.68 0 2 1 Whitelist SKCM-US 0.68 0.01 0.01 0.03 0.64 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 10 5757080 11749576 5 17 351 1 3 0 1 12 0.28 0.03 7 0 0 7 4 7 11 6 6 60.94 10.17 86.38 0 2 3 Whitelist SKCM-US 6 0.99 0.11 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 22 0.03 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 11 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 12 12308231 133162422 97 134 351 23 27 21 26 37 0.82 0 99 0 0 99 7 13 109 8 17 60.94 54.43 41.32 15 4 6 Whitelist SKCM-US 8 0.98 0 0 0 0.86 1 High confidence SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma With other complex events 231 0.33 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 13 54688413 76159129 1 3 351 1 2 0 0 0 0.3 0.01 4 0 0 4 3 4 5 3 3 60.94 100 0 0 4 3 Whitelist SKCM-US 0.62 0.05 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 14 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 15 53400944 102164833 6 6 351 1 0 2 3 0 0.34 0.51 3 0 0 NA NA NA 5 3 3 60.94 48.06 51.86 0 2 3 Whitelist SKCM-US 0.62 0.76 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 12 0.02 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 16 84440860 84778114 1 1 351 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 60.94 99.88 0 1 3 4 Whitelist SKCM-US 0.62 0.04 NA NA 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 2 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 17 40937589 59977413 1 3 351 1 2 0 0 0 0.3 0.32 3 0 0 NA NA NA NA NA NA 60.94 99.89 0 0 4 3 Whitelist SKCM-US 0.62 0.57 0 0 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 18 61486830 61545083 1 1 351 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 60.94 0.07 99.89 0 2 3 Whitelist SKCM-US 0.62 0.01 NA NA 0.59 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 2 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 19 10681266 17592525 1 2 351 0 1 0 1 0 0.57 0.34 1 0.15 0 NA NA NA NA NA NA 60.94 51.63 41.09 0 2 NA Whitelist SKCM-US 0.68 0.59 0.15 0 0.64 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 20 NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 21 NA NA 0 0 351 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.34 NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 22 41798258 46971946 1 4 351 0 4 0 0 0 0.01 0 1 0 0 NA NA NA 4 4 4 60.94 100 0 0 4 NA Whitelist SKCM-US 0.21 0 0 0 0.16 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 8 0.01 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::8c54fcfd-999f-43c5-b31f-26d006f5fff3 X NA NA 0 0 351 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 8c54fcfd-999f-43c5-b31f-26d006f5fff3 SKCM 0.9 3.17 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37445 TCGA-D3-A1Q1 8c54fcfd-999f-43c5-b31f-26d006f5fff3 female deceased C77.9 79 504 NA NA Included Skin-Melanoma SKCM US 1 16.58 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 1 106441760 106461805 1 1 53 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 4 4 21.24 46.96 53.04 0 1 2 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 2 53151669 53193552 1 1 53 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 21.24 0.02 99.88 0 2 3 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 3 44367149 64261986 6 10 53 2 1 1 2 4 0.88 0 3 0 0 NA NA NA NA NA NA 21.24 8.47 91.47 3 2 1 Whitelist SKCM-US 0.96 0 0 0 0.91 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 16 0.15 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 4 NA NA 0 0 53 0 0 0 0 0 NA 0.78 NA 0.02 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.94 0.02 NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 5 835994 846778 1 2 53 0 0 0 1 1 0.39 0.05 1 0.02 NA NA NA NA NA NA NA 21.24 0 99.87 0 2 NA Whitelist SKCM-US 19 0.68 0.16 0.02 NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 3 0.03 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 6 29284341 99627552 1 2 53 1 1 0 0 0 0.57 0.77 5 NA 0 5 4 5 6 4 4 21.24 97.1 0 11 1 4 Whitelist SKCM-US 0.68 0.93 NA 0 0.64 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 7 48077840 48136060 1 2 53 1 0 0 0 1 0.39 0.02 2 0 NA NA NA NA 7 5 5 21.24 0.1 99.65 3 1 2 Whitelist SKCM-US 19 0.68 0.09 0 NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 3 0.03 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 8 NA NA 0 0 53 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 9 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 10 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 11 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 12 NA NA 0 0 53 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 13 48879724 49356473 1 1 53 1 0 0 0 0 0.39 0.04 1 0 NA NA NA NA NA NA NA 21.24 100 0 0 3 NA Whitelist SKCM-US 0.62 0.13 0 NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 14 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 15 NA NA 0 0 53 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.87 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 16 31787070 31803992 1 1 53 0 0 1 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 21.24 57.05 37.71 9 2 NA Whitelist SKCM-US 0.62 0.06 0 NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 17 NA NA 0 0 53 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.86 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 18 NA NA 0 0 53 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 19 47588815 47717553 1 8 53 2 0 0 0 6 0.11 0 5 0 0 5 5 5 5 5 5 21.24 0.14 99.68 0 2 1 Whitelist SKCM-US 0.87 0 0 0 0.48 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 10 0.09 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 20 7078336 13913718 1 1 53 0 0 1 0 0 0.39 0.32 1 NA NA NA NA NA NA NA NA 21.24 0 99.03 2 2 NA Whitelist SKCM-US 0.62 0.57 NA NA 0.59 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 21 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 22 NA NA 0 0 53 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::905ea29f-588a-497b-9f06-2eef3bdc9442 X 80611425 94223626 2 2 53 0 0 1 1 0 0.57 1 4 NA 0 4 4 4 5 5 5 21.24 99.79 0.21 0 1 2 Whitelist SKCM-US 0.68 1 NA 0 0.64 0 No SKCM-US 905ea29f-588a-497b-9f06-2eef3bdc9442 SKCM 0.94 2.01 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO47255 TCGA-EE-A29B 905ea29f-588a-497b-9f06-2eef3bdc9442 male alive C44.7 67 NA 2452 NA Included Skin-Melanoma SKCM US 0 80.66 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 1 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 2 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 3 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 4 40298851 40328632 1 1 38 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA 5 5 5 20.17 9.12 90.87 0 1 2 Whitelist SKCM-US 0.62 0.57 0 NA 0.59 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 2 0.03 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 5 176548251 176718410 1 1 38 1 0 0 0 0 0.39 0.51 1 NA NA NA NA NA 4 3 3 20.17 66.62 33.24 0 1 NA Whitelist SKCM-US 0.62 0.76 NA NA 0.59 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 2 0.03 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 6 30956994 44170027 14 14 38 5 2 4 3 0 0.7 0 16 0 0 16 8 16 20 8 20 20.17 99.83 0.04 1 3 5 Whitelist SKCM-US 0.81 0 0 0 0.78 1 High confidence SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma With other complex events 28 0.37 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 7 41955279 114290889 1 3 38 2 0 0 0 1 0.11 0 3 0 0 NA NA NA 6 3 3 20.17 29.11 70.66 5 2 1 Whitelist SKCM-US 0.62 0.02 0 0 0.48 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 5 0.07 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 8 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 9 76498583 88805719 1 2 38 2 0 0 0 0 0.11 0.66 4 NA 0 4 4 4 5 5 5 20.17 3.83 95.47 0 1 2 Whitelist SKCM-US 0.54 0.87 NA 0 0.48 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 4 0.05 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 10 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 11 44825618 63357510 1 1 38 0 1 0 0 0 0.39 1 4 NA NA 4 4 4 5 5 5 20.17 5.65 93.93 4 2 3 Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 2 0.03 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 12 42511549 67939290 1 3 38 1 0 0 0 2 0.39 0.42 4 NA 0 4 4 4 6 5 5 20.17 15.92 84 0 1 2 Whitelist SKCM-US 0.62 0.67 NA 0 0.59 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 4 0.05 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 13 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 14 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 16 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 17 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 18 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 19 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 20 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 21 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::97d9dfc9-c937-48b4-b453-df081950419f X NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 1 No SKCM-US 97d9dfc9-c937-48b4-b453-df081950419f SKCM 0.42 1.95 Skin-Melanoma NA 0 0 stopgain,17_7574003_A_G,CN:1 2 SKCM-US DO37946 TCGA-EE-A2GT 97d9dfc9-c937-48b4-b453-df081950419f male alive C77.3 77 NA 595 NA Included Skin-Melanoma SKCM US 0 19.57 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 1 150504464 246161534 47 48 78 11 8 13 15 1 0.52 0 65 0 0 65 17 60 68 17 17 27.9 21.78 75.24 261 2 3 Whitelist SKCM-US 0.68 0 0 0 0.64 1 High confidence SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma With other complex events 95 0.61 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 2 43036434 220921099 2 2 78 0 0 1 1 0 0.57 0.84 4 0 0 4 0 4 4 0 4 27.9 0.05 99.84 9 2 1 Whitelist SKCM-US 0.68 0.97 0 0 0.64 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 4 0.03 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 3 160726005 163560662 1 2 78 2 0 0 0 0 0.11 0.37 3 0 0 NA NA NA NA NA NA 27.9 0.01 99.94 3 2 1 Whitelist SKCM-US 0.54 0.63 0 0 0.48 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 4 0.03 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 4 67789493 67801344 1 1 78 1 0 0 0 0 0.39 0.18 1 NA NA NA NA NA NA NA NA 27.9 0 99.9 2 2 NA Whitelist SKCM-US 0.62 0.39 NA NA 0.59 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 5 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 6 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA 5 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 7 70191456 116194608 1 7 78 2 1 2 2 0 0.93 0.04 10 0 0 10 9 10 13 9 9 27.9 12.58 87.16 4 2 1 Whitelist SKCM-US 0.96 0.13 0 0 0.95 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 14 0.09 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 8 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 9 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 10 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 11 NA NA 0 0 78 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.51 NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 12 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 13 NA NA 0 0 78 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 14 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 15 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 16 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 17 NA NA 0 0 78 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.9 NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 18 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 19 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 20 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 21 NA NA 0 0 78 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d 22 NA NA 0 0 78 0 0 0 0 0 NA 0.24 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.47 NA NA NA 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::a01a350d-64be-4af3-91c3-7d681c3db11d X 10621227 12848458 1 1 78 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 27.9 98.34 1.43 0 1 2 Whitelist SKCM-US 0.62 0.69 NA NA 0.59 1 No SKCM-US a01a350d-64be-4af3-91c3-7d681c3db11d SKCM 0.93 1.81 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37599 TCGA-EE-A185 a01a350d-64be-4af3-91c3-7d681c3db11d female deceased C44.5 55 151 NA NA Included Skin-Melanoma SKCM US 1 4.97 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 1 204576113 236394914 2 2 42 0 0 1 1 0 0.57 0.14 1 0 0 NA NA NA 4 4 4 32.46 10.41 89.59 33 2 NA Whitelist SKCM-US 0.68 0.34 0 0 0.64 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 2 153337978 153425169 1 1 42 1 0 0 0 0 0.39 0.08 1 0 NA NA NA NA NA NA NA 32.46 0 99.9 127 2 NA Whitelist SKCM-US 0.62 0.24 0 NA 0.59 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 3 1473193 116457979 4 4 42 1 0 1 2 0 0.57 0.03 7 0 0 7 3 5 10 3 6 32.46 96.8 0 115 3 4 Whitelist SKCM-US 0.68 0.1 0 0 0.64 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 8 0.1 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 4 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 5 78421907 166744372 1 2 42 2 0 0 0 0 0.11 0.75 4 NA 0 4 4 4 5 5 5 32.46 0.18 99.68 243 1 2 Whitelist SKCM-US 0.54 0.91 NA 0 0.48 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 6 68560864 108762661 1 2 42 0 0 1 0 1 0.39 0.74 1 NA NA NA NA NA NA NA NA 32.46 0 99.77 209 2 NA Whitelist SKCM-US 0.68 0.91 NA NA 0.59 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 3 0.04 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 7 NA NA 0 0 42 0 0 0 0 0 NA 0.49 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.74 NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 8 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 9 9132501 25292409 1 2 42 2 0 0 0 0 0.11 0.68 4 NA 0 4 3 4 5 3 5 32.46 99.24 0.09 30 3 1 Whitelist SKCM-US 0.54 0.88 NA 0 0.48 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 10 NA NA 0 0 42 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.32 NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 11 114661850 118015251 1 2 42 1 1 0 0 0 0.57 0.45 4 0 0 4 4 4 7 7 7 32.46 99.57 0 120 3 4 Whitelist SKCM-US 0.68 0.69 0 0 0.64 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 12 96516809 110640462 1 2 42 0 2 0 0 0 0.11 1 4 NA 0 4 3 4 6 4 6 32.46 78.92 17.34 53 4 2 Whitelist SKCM-US 0.54 1 NA 0 0.48 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 13 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 15 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 16 83892698 83974673 1 1 42 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 32.46 8.69 86.78 32 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 2 0.02 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 17 NA NA 0 0 42 0 0 0 0 0 NA 0.1 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.27 0 NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 18 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 0 4 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 19 NA NA 0 0 42 0 0 0 0 0 NA 0.57 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.79 NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 20 NA NA 0 0 42 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.81 NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 21 NA NA 0 0 42 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.65 NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c X 1608634 2595463 1 2 42 1 0 1 0 0 0.57 0.47 1 0.47 0 NA NA NA NA NA NA 32.46 100 0 1 1 NA Whitelist SKCM-US 0.68 0.71 0.47 0 0.64 0 No SKCM-US b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c SKCM 0.47 2.24 Skin-Melanoma NA 4 0.05 NA 3 SKCM-US DO37425 TCGA-EE-A2M5 b5e37b9b-6264-4cc8-9b44-1d8ac0692d6c male deceased C77.3 49 659 NA NA Included Skin-Melanoma SKCM US 1 21.68 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 1 NA NA 0 0 17 0 0 0 0 0 NA 0.14 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0.34 0 NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 2 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 3 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 4 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 5 NA NA 0 0 17 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 6 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 7 52802879 55009264 2 2 17 0 1 1 0 0 0.57 0.06 6 0 0 6 3 4 8 4 5 85.33 97.32 0 28 1 3 Whitelist SKCM-US 0.68 0.19 0 0 0.64 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 4 0.12 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 8 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 9 26585807 30068978 1 2 17 0 1 0 0 1 0.39 0 2 0 NA NA NA NA 5 0 3 85.33 99.26 0.06 23 2 4 Whitelist SKCM-US 0.68 0 0 NA 0.59 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 3 0.09 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 10 77074640 89700846 1 3 17 0 0 0 1 2 0.39 0 2 0 0 NA NA NA 4 3 3 85.33 27.99 68.65 16 1 2 Whitelist SKCM-US 0.62 0 0 0 0.59 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 4 0.12 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 11 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 12 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 13 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 14 NA NA 0 0 17 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.26 NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 15 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 16 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 17 NA NA 0 0 17 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.62 NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 18 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 19 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 20 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 21 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d 22 NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b6691e3c-ee3f-49a2-8bd4-2086413e5d8d X NA NA 0 0 17 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US b6691e3c-ee3f-49a2-8bd4-2086413e5d8d SKCM 0.24 3.89 Skin-Melanoma NA 0 0 NA 4 SKCM-US DO37418 TCGA-DA-A3F8 b6691e3c-ee3f-49a2-8bd4-2086413e5d8d male alive C77.0 39 NA 111 NA Included Skin-Melanoma SKCM US 0 3.65 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 1 3557626 31135053 2 7 633 0 0 0 2 5 0.11 0 7 0 0 7 3 4 13 3 4 61.24 77.75 19.23 0 3 6 Whitelist SKCM-US 0.77 0 0 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 9 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 2 38108704 224312260 1 2 633 0 2 0 0 0 0.11 0 5 0 0 5 3 4 7 3 5 61.24 87.41 12.5 0 3 2 Whitelist SKCM-US 0.54 0 0 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 3 47423861 128885162 1 2 633 1 0 1 0 0 0.57 0 5 0.11 0 5 5 5 6 6 6 61.24 46.34 53.53 2 2 3 Whitelist SKCM-US 0.68 0 0.11 0 0.64 1 Linked to high confidence SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma Canonical without polyploidization 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 4 32372925 83804010 1 5 633 0 2 0 0 3 0.11 0 6 0 0 6 4 6 9 5 5 61.24 59.65 37.97 0 2 3 Whitelist SKCM-US 0.62 0 0 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 7 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 5 28384002 28636553 1 1 633 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 61.24 99.54 0.32 0 2 4 Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 6 52941905 53336895 2 2 633 0 2 0 0 0 0.11 0 4 0 0 4 0 3 13 4 7 61.24 59.84 36.85 0 4 5 Whitelist SKCM-US 0.54 0 0 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 7 11358420 131127109 1 4 633 1 1 1 0 1 0.8 0 10 0 0 10 5 7 15 5 11 61.24 99.78 0 0 4 3 Whitelist SKCM-US 0.68 0 0 0 0.84 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 7 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 8 50126618 55588669 8 82 633 1 1 5 1 74 0.11 0 23 0 0 23 4 5 38 10 11 61.24 64.3 32.17 0 2 37 Whitelist SKCM-US 11 0.68 0 0 0 0.48 1 Low confidence SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma With other complex events 90 0.07 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 9 30505458 38578209 2 6 633 1 2 0 1 2 0.57 0.76 15 0 0 15 3 4 25 3 4 61.24 38.44 61.14 0 3 4 Whitelist SKCM-US 0.62 0.92 0 0 0.64 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 10 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 10 NA NA 0 0 633 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist SKCM-US NA 0 0 NA NA 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 11 68369991 101011602 67 198 633 15 18 20 14 131 0.72 0 63 0 0 63 6 6 75 6 6 61.24 50.87 45.19 14 49 4 Whitelist SKCM-US 0.75 0 0 0 0.79 1 Low confidence SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma With other complex events 265 0.21 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 12 32403845 111077933 1 9 633 2 1 0 0 6 0.3 0 6 0 0 6 3 5 8 3 3 61.24 50.54 49.38 0 2 3 Whitelist SKCM-US 0.62 0 0 0 0.59 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 12 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 13 NA NA 0 0 633 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 14 76320103 78531152 4 4 633 0 2 1 1 0 0.57 0 4 0 0 4 0 3 13 5 9 61.24 97.21 0 0 3 4 Whitelist SKCM-US 0.68 0.02 0 0 0.64 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 8 0.01 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 15 47687942 55499374 8 70 633 2 2 1 3 62 0.8 0 28 0 0 28 4 5 57 4 6 61.24 71.59 23.54 0 23 6 Whitelist SKCM-US 11 0.95 0 0 0 0.84 1 Low confidence SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma With other complex events 78 0.06 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 16 26465695 71616182 1 2 633 0 2 0 0 0 0.11 0 4 NA 0 4 3 4 5 3 5 61.24 2.22 97.61 0 2 3 Whitelist SKCM-US 0.54 0 NA 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 17 73362013 75856314 2 2 633 0 2 0 0 0 0.11 0.09 3 0 0 NA NA NA 10 3 3 61.24 74.88 25.1 0 4 8 Whitelist SKCM-US 0.54 0.24 0 0 0.48 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 18 274892 77288441 232 254 633 56 58 58 60 22 0.99 0 145 0 0 145 10 20 146 10 14 61.24 68.08 26.06 30 3 4 Whitelist SKCM-US 3 1 0 0 0 1 1 High confidence SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma With other complex events 486 0.38 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 19 NA NA 0 0 633 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 20 44798234 44955104 2 2 633 1 1 0 0 0 0.57 0.58 2 0 0 NA NA NA NA NA NA 61.24 99.01 0 0 4 5 Whitelist SKCM-US 0.68 0.81 0 0 0.64 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 4 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 21 33058414 33138628 1 1 633 0 1 0 0 0 0.39 0.1 2 NA NA NA NA NA 4 3 4 61.24 77.35 0 0 3 5 Whitelist SKCM-US 0.62 0.27 NA NA 0.59 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 22 NA NA 0 0 633 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.51 NA NA NA 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::b85b14d7-3b5a-4800-af12-622ec03b9fe5 X NA NA 0 0 633 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US b85b14d7-3b5a-4800-af12-622ec03b9fe5 SKCM 0.72 3.36 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO51251 TCGA-ER-A19T b85b14d7-3b5a-4800-af12-622ec03b9fe5 male deceased C44.7 51 270 NA NA Included Skin-Melanoma SKCM US 1 8.88 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 1 234481132 235337474 1 3 50 3 0 0 0 0 0.03 0.8 5 0 0 5 4 5 8 4 5 52.56 48.12 48.85 0 2 4 Whitelist SKCM-US 0.41 0.95 0 0 0.33 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 6 0.06 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 2 NA NA 0 0 50 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.31 NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 3 112330891 157068796 1 1 50 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 52.56 99.97 0 0 1 3 Whitelist SKCM-US 0.62 0.8 NA NA 0.59 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 4 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 5 51681422 51691833 1 1 50 1 0 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 52.56 0.01 99.84 0 1 2 Whitelist SKCM-US 0.62 0.62 NA NA 0.59 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 6 NA NA 0 0 50 0 0 0 0 0 NA 0.37 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.62 NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 7 10477885 62019633 10 21 50 2 1 4 3 11 0.57 0 32 0 0 32 13 13 35 14 14 52.56 37.23 62.55 4 4 3 Whitelist SKCM-US 0.95 0 0 0 0.64 1 High confidence SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma With other complex events 31 0.31 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 8 68522750 114198879 1 2 50 2 0 0 0 0 0.11 1 4 NA 0 4 3 4 5 3 3 52.56 99.88 0.01 7 3 2 Whitelist SKCM-US 0.54 1 NA 0 0.48 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 9 20706871 25649521 1 2 50 2 0 0 0 0 0.11 0 1 0 0 NA NA NA 11 5 5 52.56 94.41 5.46 0 1 NA Whitelist SKCM-US 0.54 0 0 0 0.48 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 10 61158196 61257686 1 1 50 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 52.56 99.82 0 0 0 1 Whitelist SKCM-US 0.62 1 NA NA 0.59 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 11 NA NA 0 0 50 0 0 0 0 0 NA 0.29 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.54 NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 12 51369253 65448709 2 3 50 0 0 1 1 1 0.57 0.51 1 NA 0 NA NA NA NA NA NA 52.56 0 99.92 0 2 NA Whitelist SKCM-US 0.62 0.75 NA 0 0.64 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 5 0.05 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 13 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 14 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 15 NA NA 0 0 50 0 0 0 0 0 NA 0.41 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.65 NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 16 NA NA 0 0 50 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.63 NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 17 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 18 53617024 59024538 1 1 50 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 52.56 6.93 93.04 2 1 2 Whitelist SKCM-US 0.62 0.64 NA NA 0.59 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 19 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 20 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 21 NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b 22 24651462 39105065 1 1 50 0 0 1 0 0 0.39 0.45 1 NA NA NA NA NA NA NA NA 52.56 100 0 0 3 NA Whitelist SKCM-US 0.62 0.69 NA NA 0.59 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::be73fde2-d843-426b-9306-a02d3f2a754b X NA NA 0 0 50 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US be73fde2-d843-426b-9306-a02d3f2a754b SKCM 0.84 2.36 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37896 TCGA-EE-A2GN be73fde2-d843-426b-9306-a02d3f2a754b male alive C49.3 67 NA 2767 NA Included Skin-Melanoma SKCM US 0 91.02 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 1 51935111 51963589 1 1 30 1 0 0 0 0 0.39 0.01 1 0 NA NA NA NA 9 3 3 18.33 7.22 89.76 0 2 NA Whitelist SKCM-US 0.62 0.04 0 NA 0.59 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 2 0.03 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 2 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 3 12642273 42235918 2 2 30 0 0 1 1 0 0.57 0.16 1 0.06 0 NA NA NA NA NA NA 18.33 0.1 99.85 60 2 NA Whitelist SKCM-US 0.68 0.36 0.06 0 0.64 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 4 0.07 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 4 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 5 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 6 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 7 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 8 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 9 21905236 22110189 1 1 30 1 0 0 0 0 0.39 0.33 2 NA NA NA NA NA 5 3 3 18.33 31.28 68.57 0 0 1 Whitelist SKCM-US 0.62 0.58 NA NA 0.59 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 2 0.03 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 10 NA NA 0 0 30 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.16 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 11 128344974 128371131 1 1 30 1 0 0 0 0 0.39 0.65 2 NA NA NA NA NA NA NA NA 18.33 0.02 99.6 40 1 2 Whitelist SKCM-US 0.62 0.86 NA NA 0.59 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 2 0.03 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 12 NA NA 0 0 30 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 13 21086596 21112742 1 1 30 1 0 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 18.33 0.02 99.98 0 1 2 Whitelist SKCM-US 0.62 0.52 NA NA 0.59 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 2 0.03 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 14 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 15 25911346 59664768 1 1 30 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA NA NA NA 18.33 32.92 67.08 3 1 2 Whitelist SKCM-US 0.62 0.43 NA NA 0.59 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 2 0.03 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 16 NA NA 0 0 30 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 7 0 0 0 0 0 0 0 0 Whitelist SKCM-US NA 0.04 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 17 NA NA 0 0 30 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.04 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 18 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 19 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 20 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 21 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 22 NA NA 0 0 30 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c061ae6c-7a02-47c3-aecd-a56487c01603 X NA NA 0 0 30 0 0 0 0 0 NA 0.66 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.87 NA NA NA 0 No SKCM-US c061ae6c-7a02-47c3-aecd-a56487c01603 SKCM 0.64 1.99 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37531 TCGA-EE-A2MI c061ae6c-7a02-47c3-aecd-a56487c01603 male deceased C77.3 43 6225 NA NA Included Skin-Melanoma SKCM US 1 204.77 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 1 150445691 247569477 56 58 236 15 16 13 12 2 0.87 0 97 0 0 97 21 37 103 21 21 82.21 99.97 0 1 3 5 Whitelist SKCM-US 0.86 0 0 0 0.91 1 High confidence SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma With other complex events 114 0.24 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 2 153573071 205747285 1 10 236 1 0 1 0 8 0.57 0.13 8 0 0 8 8 8 9 9 9 82.21 99.1 0.8 0 2 4 Whitelist SKCM-US 1 0.96 0.32 0 0 0.64 1 Linked to high confidence SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma Before polyploidization 12 0.03 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 3 NA NA 0 0 236 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 0 NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 4 143381732 162582632 1 6 236 1 1 0 1 3 0.8 0.09 3 0 0 NA NA NA 4 3 4 82.21 96.73 3.25 3 3 2 Whitelist SKCM-US 0.62 0.25 0 0 0.84 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 9 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 5 114198508 160430501 2 2 236 0 0 1 1 0 0.57 0 4 0 0 4 4 4 6 5 6 82.21 71.86 25.45 2 3 4 Whitelist SKCM-US 0.68 0.01 0 0 0.64 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 6 125111580 133828068 1 2 236 2 0 0 0 0 0.11 0 3 NA 0 NA NA NA 6 4 4 82.21 66.61 33.24 0 2 3 Whitelist SKCM-US 0.54 0 NA 0 0.48 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 7 83569717 150614810 57 57 236 14 13 11 19 0 0.49 0 9 0 0 9 9 9 11 9 9 82.21 99.75 0 0 4 3 Whitelist SKCM-US 0.68 0 0 0 0.64 1 High confidence SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma After polyploidization 114 0.24 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 8 101110847 113997890 4 5 236 2 0 1 1 1 0.57 0.1 6 0 0 6 6 6 14 6 9 82.21 99.98 0.01 0 4 5 Whitelist SKCM-US 0.93 0.27 0 0 0.64 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 9 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 9 21962147 21989581 1 1 236 1 0 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 82.21 67.61 31.69 0 2 NA Whitelist SKCM-US 0.62 0.05 NA NA 0.59 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 2 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 10 121077283 121523403 2 6 236 0 2 0 0 4 0.11 0.75 3 0 0 NA NA NA 6 4 4 82.21 31.77 68.05 0 3 5 Whitelist SKCM-US 0.54 0.92 0 0 0.48 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 8 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 11 NA NA 0 0 236 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 12 85549514 114637712 1 4 236 2 1 1 0 0 0.57 0.06 5 0 0 5 3 5 5 3 3 82.21 99.96 0.03 0 3 2 Whitelist SKCM-US 0.68 0.19 0 0 0.64 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 8 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 13 32421414 32924554 3 6 236 0 2 1 0 3 0.3 0.28 4 0 0 4 4 4 5 5 5 82.21 99.87 0 0 3 4 Whitelist SKCM-US 2 0.62 0.53 0 0 0.59 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 9 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 14 NA NA 0 0 236 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.5 0 NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 15 74989906 75503596 2 6 236 1 1 1 1 2 1 0.32 3 0 0 NA NA NA 5 0 0 82.21 95.22 0 0 1 4 Whitelist SKCM-US 0.93 0.57 0 0 1 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 10 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 16 NA NA 0 0 236 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 17 26198077 70888249 1 6 236 1 1 0 1 3 0.8 0.54 4 0 0 4 0 4 7 3 3 82.21 80.92 14.15 0 2 4 Whitelist SKCM-US 0.62 0.77 0 0 0.84 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 9 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 18 NA NA 0 0 236 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 19 47078312 49037334 1 9 236 0 1 0 1 7 0.57 0.03 8 0 0 8 4 6 12 5 7 82.21 79.17 13.55 0 4 2 Whitelist SKCM-US 0.62 0.11 0 0 0.64 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 11 0.02 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 20 NA NA 0 0 236 0 0 0 0 0 NA 0.82 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.96 NA NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 21 NA NA 0 0 236 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 22 41444539 41927863 2 4 236 1 0 1 0 2 0.57 0 4 0 0 4 3 4 6 3 6 82.21 98.99 0 0 6 4 Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 6 0.01 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::c2948fe9-5798-43bc-a743-511e94e417f8 X 34205440 155099827 1 2 236 2 0 0 0 0 0.11 0 2 NA 0 NA NA NA NA NA NA 82.21 0.08 99.81 3 1 2 Whitelist SKCM-US 0.54 0.01 NA 0 0.48 1 No SKCM-US c2948fe9-5798-43bc-a743-511e94e417f8 SKCM 0.87 3.29 Skin-Melanoma NA 4 0.01 NA 3 SKCM-US DO37627 TCGA-FS-A1ZD c2948fe9-5798-43bc-a743-511e94e417f8 male deceased C77.9 63 1628 NA NA Included Skin-Melanoma SKCM US 1 53.55 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 1 6353685 46737614 1 3 51 0 3 0 0 0 0.03 0.12 6 0.01 0 6 6 6 7 7 7 25.66 0.99 99.01 0 2 3 Whitelist SKCM-US 0.41 0.3 0.01 0 0.33 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 6 0.06 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 2 NA NA 0 0 51 0 0 0 0 0 NA 0.8 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.95 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 3 139452119 169344261 3 3 51 0 1 1 1 0 0.8 0.78 2 0 0 NA NA NA NA NA NA 25.66 15.1 84.74 0 1 2 Whitelist SKCM-US 0.87 0.94 0 0 0.84 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 6 0.06 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 4 182620371 183708737 2 2 51 1 1 0 0 0 0.57 0.39 4 0 0 4 3 4 7 5 5 25.66 0.58 99.39 5 2 1 Whitelist SKCM-US 0.68 0.64 0 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 5 168815618 176768717 4 4 51 2 1 1 0 0 0.57 0.04 6 0 0 6 4 6 7 4 4 25.66 0.27 99.58 9 1 2 Whitelist SKCM-US 0.68 0.14 0 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 8 0.08 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 6 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 7 101683851 110297647 2 3 51 0 0 1 1 1 0.57 0.05 1 0 0 NA NA NA NA NA NA 25.66 99.78 0 0 4 NA Whitelist SKCM-US 0.87 0.17 0 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 5 0.05 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 8 4994724 75572947 1 3 51 3 0 0 0 0 0.03 0.74 5 0.01 0 5 3 4 6 3 3 25.66 96.47 0 5 7 0 Whitelist SKCM-US 0.41 0.91 0.01 0 0.33 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 6 0.06 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 9 15364682 26230724 2 2 51 0 0 1 1 0 0.57 1 2 NA 0 NA NA NA 5 5 5 25.66 21.99 77.88 0 1 2 Whitelist SKCM-US 0.68 1 NA 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 10 49789377 121655776 1 2 51 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 25.66 0 99.8 0 2 NA Whitelist SKCM-US 0.68 1 NA 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 11 55395379 55426729 1 1 51 1 0 0 0 0 0.39 0.51 1 0 NA NA NA NA NA NA NA 25.66 0 99.57 3 2 NA Whitelist SKCM-US 0.62 0.76 0 NA 0.59 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 12 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 13 NA NA 0 0 51 0 0 0 0 0 NA 0.26 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.5 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 14 26028349 51080385 1 2 51 1 1 0 0 0 0.57 0.68 4 NA 0 4 3 4 7 3 3 25.66 1.74 97.34 4 2 1 Whitelist SKCM-US 0.68 0.88 NA 0 0.64 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 4 0.04 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 15 NA NA 0 0 51 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.17 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 16 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 17 NA NA 0 0 51 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 18 25461774 25472326 1 1 51 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 25.66 0 99.96 0 2 NA Whitelist SKCM-US 0.62 0.36 NA NA 0.59 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 2 0.02 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 19 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 20 NA NA 0 0 51 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA 5 5 5 0 0 0 0 0 0 Whitelist SKCM-US NA 0.09 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 21 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 22 NA NA 0 0 51 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::ce28f65d-4ae8-4e63-815f-5b8d4389e092 X NA NA 0 0 51 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.91 NA NA NA 0 No SKCM-US ce28f65d-4ae8-4e63-815f-5b8d4389e092 SKCM 0.86 2.22 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37426 TCGA-ER-A19J ce28f65d-4ae8-4e63-815f-5b8d4389e092 male deceased C49.0 54 196 NA NA Included Skin-Melanoma SKCM US 1 6.45 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 1 NA NA 0 0 12 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 2 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 4 NA NA 0 0 12 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.79 NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 5 165184605 166348506 1 3 12 3 0 0 0 0 0.03 0.01 6 0 0 6 6 6 8 7 7 28 3.07 96.8 0 1 2 Whitelist SKCM-US 0.41 0.03 0 0 0.33 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 6 0.25 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 6 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 7 146669956 146691633 1 1 12 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 4 4 4 28 27.45 72.32 0 2 3 Whitelist SKCM-US 0.62 0.33 NA NA 0.59 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 2 0.08 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 8 NA NA 0 0 12 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.31 NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 10 NA NA 0 0 12 0 0 0 0 0 NA 0.43 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.68 NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 11 NA NA 0 0 12 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.27 NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 12 4752666 5112292 1 1 12 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 28 0.27 99.71 0 2 3 Whitelist SKCM-US 0.62 0.69 NA NA 0.59 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 2 0.08 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 17 37600486 38826283 1 1 12 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 28 1.51 98.49 0 2 3 Whitelist SKCM-US 0.62 0.52 NA NA 0.59 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 2 0.08 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d32a4219-4cca-470f-b6b3-11447d9f5e0b X 124269939 124293471 1 1 12 1 0 0 0 0 0.39 0.46 2 NA NA NA NA NA 4 4 4 28 71.93 28.07 0 1 2 Whitelist SKCM-US 0.62 0.71 NA NA 0.59 0 No SKCM-US d32a4219-4cca-470f-b6b3-11447d9f5e0b SKCM 0.81 2.13 Skin-Melanoma NA 2 0.08 NA 2 SKCM-US DO47451 TCGA-ER-A2NF d32a4219-4cca-470f-b6b3-11447d9f5e0b male alive C44.4 53 NA 498 NA Included Skin-Melanoma SKCM US 0 16.38 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 1 178306230 202995905 2 2 48 0 0 1 1 0 0.57 0.27 4 0 0 4 4 4 7 5 5 26.77 0.19 99.81 43 2 3 Whitelist SKCM-US 0.68 0.52 0 0 0.64 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 4 0.04 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 2 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 3 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 4 112081905 112953329 1 1 48 1 0 0 0 0 0.39 0.14 2 0 NA NA NA NA NA NA NA 26.77 0.46 99.53 41 1 2 Whitelist SKCM-US 0.62 0.33 0 NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 5 61638467 114855591 1 2 48 0 1 0 0 1 0.39 0.03 1 0 0 NA NA NA NA NA NA 26.77 99.86 0 123 1 NA Whitelist SKCM-US 0.68 0.11 0 0 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 3 0.03 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 6 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 7 103764088 106147704 1 1 48 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 4 4 4 26.77 56.43 43.33 18 2 3 Whitelist SKCM-US 0.62 0.06 0 NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 8 60725540 65357279 1 1 48 0 1 0 0 0 0.39 0.31 2 0 NA NA NA NA NA NA NA 26.77 3.16 96.83 82 2 4 Whitelist SKCM-US 0.62 0.56 0 NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 9 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 10 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 11 65350959 65946468 1 1 48 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 26.77 0.44 99.13 46 1 2 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 12 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 13 NA NA 0 0 48 0 0 0 0 0 NA 0.68 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.88 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 14 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 15 70913669 70959831 1 1 48 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 26.77 0 84.59 0 2 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 16 NA NA 0 0 48 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 7 7 7 0 0 0 0 0 0 Whitelist SKCM-US NA 0.01 0 NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 17 43040945 80835098 3 5 48 0 2 0 1 2 0.3 0 7 0 0 7 0 4 9 0 4 26.77 83.49 16.06 10 3 4 Whitelist SKCM-US 0.68 0 0 0 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 8 0.08 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 18 68331960 68413559 1 1 48 0 1 0 0 0 0.39 0.37 2 NA NA NA NA NA NA NA NA 26.77 0.1 99.78 66 2 4 Whitelist SKCM-US 0.62 0.62 NA NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 19 37630069 58531889 1 1 48 0 1 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 26.77 40.83 49.99 9 2 NA Whitelist SKCM-US 0.62 0.48 NA NA 0.59 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 2 0.02 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 20 NA NA 0 0 48 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 21 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 22 NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d6283ab0-9019-4ad2-93aa-2e6b39cd9641 X NA NA 0 0 48 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d6283ab0-9019-4ad2-93aa-2e6b39cd9641 SKCM 0.72 1.79 Skin-Melanoma NA 0 0 nonsynonymous_SNV,17_7578211_T_C,CN:1 2 SKCM-US DO47331 TCGA-EE-A3J5 d6283ab0-9019-4ad2-93aa-2e6b39cd9641 male deceased C44.5 71 1124 NA NA Included Skin-Melanoma SKCM US 1 36.97 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 1 10089340 223685340 1 4 70 1 1 0 2 0 0.57 1 5 0 0 5 3 4 6 3 3 65.94 99.97 0.02 20 3 2 Whitelist SKCM-US 0.68 1 0 0 0.64 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 8 0.06 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 2 3268569 19511546 1 5 70 3 0 1 1 0 0.28 0.19 6 0.03 0 6 3 6 11 5 11 65.94 0.02 99.89 2 2 3 Whitelist SKCM-US 0.62 0.41 0.03 0 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 10 0.07 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 3 61870503 63383697 3 3 70 1 0 1 1 0 0.8 1 4 0 0 4 0 3 6 3 5 65.94 99.11 0.75 0 4 2 Whitelist SKCM-US 0.87 1 0 0 0.84 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 6 0.04 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 4 137413853 148950971 1 2 70 1 0 1 0 0 0.57 0.63 3 0 0 NA NA NA NA NA NA 65.94 99.97 0.01 6 4 2 Whitelist SKCM-US 0.68 0.84 0 0 0.64 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 5 157289915 157303772 1 1 70 0 0 1 0 0 0.39 0.33 1 NA NA NA NA NA NA NA NA 65.94 99.87 0 6 4 NA Whitelist SKCM-US 0.62 0.58 NA NA 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 6 78526675 170358546 1 3 70 1 1 1 0 0 0.8 0.8 4 0 0 4 3 4 9 3 3 65.94 35.14 62.03 4 2 1 Whitelist SKCM-US 0.87 0.95 0 0 0.84 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 6 0.04 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 7 12322884 79041815 1 2 70 2 0 0 0 0 0.11 0.79 5 0 0 5 5 5 5 5 5 65.94 99.78 0 17 5 4 Whitelist SKCM-US 0.54 0.94 0 0 0.48 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 8 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 9 128274854 134899562 5 6 70 1 1 2 1 1 0.9 0 11 0 0 11 11 11 20 12 12 65.94 66.75 30.69 0 2 6 Whitelist SKCM-US 0.93 0 0 0 0.92 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 11 0.08 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 10 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 11 NA NA 0 0 70 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.63 NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 12 81979497 82288702 2 2 70 0 0 1 1 0 0.57 0.57 1 0 0 NA NA NA NA NA NA 65.94 99.92 0 2 3 NA Whitelist SKCM-US 0.68 0.8 0 0 0.64 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 13 107886874 107966393 1 1 70 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 65.94 100 0 2 4 5 Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 14 83805686 83824714 1 1 70 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 65.94 0 99.09 0 2 NA Whitelist SKCM-US 0.62 0.9 NA NA 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 15 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 16 77501268 77947778 1 3 70 0 1 1 1 0 0.8 0.12 3 0 0 NA NA NA 4 3 4 65.94 95.48 0 0 3 2 Whitelist SKCM-US 0.87 0.3 0 0 0.84 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 6 0.04 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 17 11169592 51363795 1 3 70 0 0 1 0 2 0.39 0.01 1 0 0 NA NA NA NA NA NA 65.94 100 0 0 3 NA Whitelist SKCM-US 0.62 0.05 0 0 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 18 NA NA 0 0 70 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.14 NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 19 NA NA 0 0 70 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 20 54566170 58541377 2 2 70 0 0 1 1 0 0.57 0.02 1 0 0 NA NA NA 4 4 4 65.94 99.03 0 4 4 NA Whitelist SKCM-US 0.68 0.07 0 0 0.64 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 21 NA NA 0 0 70 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 0 0 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e 22 27588133 27772354 1 2 70 0 0 1 1 0 0.57 0.2 1 NA 0 NA NA NA NA NA NA 65.94 100 0 0 4 NA Whitelist SKCM-US 0.68 0.43 NA 0 0.64 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 4 0.03 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d7ee2693-39a8-4e3a-b6f6-e4729800e34e X 151616279 152700605 1 1 70 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA 4 4 4 65.94 2.44 97.56 0 1 2 Whitelist SKCM-US 0.62 0.81 NA NA 0.59 0 No SKCM-US d7ee2693-39a8-4e3a-b6f6-e4729800e34e SKCM 0.77 3.43 Skin-Melanoma NA 2 0.01 NA 3 SKCM-US DO37440 TCGA-EB-A24D d7ee2693-39a8-4e3a-b6f6-e4729800e34e male alive C44.6 72 NA 42 NA Included Skin-Melanoma SKCM US 0 1.38 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 1 154439235 155043357 2 2 266 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 6 3 3 75.69 64.66 32.32 0 4 NA Whitelist SKCM-US 0.68 0 0 0 0.64 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 2 142014971 218119264 2 7 266 2 0 2 2 1 0.57 0.32 15 0 0 15 5 12 33 7 12 75.69 99.81 0.1 1 5 3 Whitelist SKCM-US 0.68 0.57 0 0 0.64 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 13 0.02 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 3 66947406 89593615 10 11 266 3 4 2 1 1 0.57 0.15 11 0 0 11 4 6 26 6 13 75.69 96.8 0.05 10 7 8 Whitelist SKCM-US 0.62 0.35 0 0 0.64 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 21 0.04 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 4 11634041 20528560 3 3 266 1 0 1 1 0 0.8 0.62 5 0 0 5 3 5 11 5 10 75.69 33.37 66.62 0 7 5 Whitelist SKCM-US 0.87 0.84 0 0 0.84 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 5 2723123 3079434 3 4 266 2 1 0 0 1 0.3 0.9 4 0 0 4 3 4 15 5 5 75.69 99.76 0.12 0 7 4 Whitelist SKCM-US 0.54 1 0 0 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 7 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 6 38794726 163011693 1 3 266 2 1 0 0 0 0.3 0 6 0 0 6 5 6 6 5 5 75.69 34.47 62.71 0 2 1 Whitelist SKCM-US 0.62 0 0 0 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 7 92899327 128870216 7 7 266 2 0 3 2 0 0.44 0.01 12 0 0 12 4 9 37 5 6 75.69 97.28 0 2 8 10 Whitelist SKCM-US 0.68 0.03 0 0 0.64 1 Low confidence SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma With other complex events 14 0.03 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 8 NA NA 0 0 266 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 9 21982099 22495068 2 2 266 2 0 0 0 0 0.11 0.34 4 0 0 4 3 4 15 3 9 75.69 98.96 0.34 0 2 0 Whitelist SKCM-US 0.54 0.59 0 0 0.48 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 4 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 10 NA NA 0 0 266 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0 NA NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 11 109965906 109976369 1 1 266 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 75.69 99.47 0.1 0 3 NA Whitelist SKCM-US 0.62 0 NA NA 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 2 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 12 86371028 97269441 1 1 266 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA NA NA NA 75.69 99.92 0 1 4 5 Whitelist SKCM-US 0.62 0.18 0 NA 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 2 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 13 NA NA 0 0 266 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 14 63321984 103042483 8 9 266 1 1 3 3 1 0.57 0.37 2 0 0 NA NA NA 4 3 3 75.69 25 74.09 0 2 3 Whitelist SKCM-US 0.85 0.63 0 0 0.64 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 17 0.03 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 15 73891842 97062697 23 27 266 4 6 7 6 4 0.84 0 22 0 0 22 3 3 27 3 4 75.69 99.9 0 4 49 5 Whitelist SKCM-US 0.87 0 0 0 0.88 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 50 0.09 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 16 27344492 79213206 1 6 266 3 1 0 1 1 0.28 0.85 12 0 0 12 7 11 13 7 11 75.69 81.86 18.04 2 4 3 Whitelist SKCM-US 0.68 0.98 0 0 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 11 0.02 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 17 NA NA 0 0 266 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.05 NA NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 18 32146769 51563218 1 3 266 2 1 0 0 0 0.3 0.13 6 0 0 6 5 6 7 5 5 75.69 1.73 98.23 2 2 1 Whitelist SKCM-US 0.62 0.32 0 0 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 6 0.01 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 19 2937633 4461511 1 1 266 1 0 0 0 0 0.39 0.5 2 0.35 NA NA NA NA 8 4 4 75.69 99.83 0 0 3 6 Whitelist SKCM-US 0.62 0.75 0.35 NA 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 2 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 20 14706894 58473316 1 4 266 2 0 2 0 0 0.26 0.67 3 0 0 NA NA NA 4 0 0 75.69 98.73 0.28 0 2 3 Whitelist SKCM-US 0.62 0.87 0 0 0.59 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 8 0.02 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 21 15944010 48061613 72 73 266 21 15 19 17 1 0.77 0 26 0 0 26 17 26 28 17 17 75.69 65.36 11.85 0 3 4 Whitelist SKCM-US 0.85 0 0 0 0.84 1 High confidence SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma After polyploidization 145 0.27 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 22 NA NA 0 0 266 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.63 NA NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::d8eac750-9daf-4465-b672-9e31fd369057 X NA NA 0 0 266 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.12 0 NA NA 1 No SKCM-US d8eac750-9daf-4465-b672-9e31fd369057 SKCM 0.47 3.89 Skin-Melanoma NA 0 0 NA 5 SKCM-US DO37435 TCGA-DA-A3F5 d8eac750-9daf-4465-b672-9e31fd369057 male alive C77.0 45 NA 6076 NA Included Skin-Melanoma SKCM US 0 199.87 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 1 68195011 191874913 1 2 167 2 0 0 0 0 0.11 0 2 0 0 NA NA NA NA NA NA 31.57 18.12 81.88 1 1 2 Whitelist SKCM-US 0.54 0.01 0 0 0.48 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 2 68073055 242389353 1 2 167 1 0 0 1 0 0.57 0 3 NA 0 NA NA NA NA NA NA 31.57 0.3 99.61 8 2 1 Whitelist SKCM-US 0.68 0 NA 0 0.64 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 3 116257667 194255698 1 4 167 4 0 0 0 0 0.01 0.09 1 0 0 NA NA NA NA NA NA 31.57 94.75 5.11 3 1 NA Whitelist SKCM-US 0.21 0.26 0 0 0.16 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 8 0.02 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 4 84339619 188919235 12 12 167 3 2 4 3 0 0.88 0.22 2 0 0 NA NA NA 5 5 5 31.57 40.32 59.67 8 1 2 Whitelist SKCM-US 0.93 0.45 0 0 0.91 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 24 0.07 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 5 NA NA 0 0 167 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.02 NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 6 95835220 130910902 1 3 167 2 0 0 1 0 0.3 0.02 3 0 0 NA NA NA NA NA NA 31.57 0.04 99.81 4 2 1 Whitelist SKCM-US 0.62 0.08 0 0 0.59 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 6 0.02 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 7 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 8 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 9 33890415 119919730 1 2 167 1 1 0 0 0 0.57 0.69 5 0 0 5 4 5 7 4 4 31.57 99.3 0 5 1 4 Whitelist SKCM-US 0.68 0.89 0 0 0.64 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 10 NA NA 0 0 167 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.13 NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 11 102225679 128909750 1 1 167 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 4 4 31.57 57.6 38.57 1 1 2 Whitelist SKCM-US 0.62 0.26 NA NA 0.59 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 12 81681008 125861604 1 4 167 2 0 1 1 0 0.57 0.71 1 0 0 NA NA NA NA NA NA 31.57 0 99.92 3 2 NA Whitelist SKCM-US 0.68 0.9 0 0 0.64 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 8 0.02 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 13 33553524 110451695 72 105 167 19 19 16 18 33 0.95 0 22 0 0 22 22 22 23 23 23 31.57 2.25 97.75 18 1 2 Whitelist SKCM-US 0.98 0 0 0 0.97 1 High confidence SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma Canonical without polyploidization 177 0.53 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 14 67820433 68691243 1 1 167 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 31.57 0.81 98.27 1 2 3 Whitelist SKCM-US 0.62 0.21 NA NA 0.59 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 15 NA NA 0 0 167 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 9 9 9 0 0 0 0 0 0 Whitelist SKCM-US NA 0 0 NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 16 17769667 26045803 1 2 167 2 0 0 0 0 0.11 0.34 1 NA 0 NA NA NA NA NA NA 31.57 86.36 9.12 0 1 NA Whitelist SKCM-US 0.54 0.59 NA 0 0.48 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 17 36332283 61022554 1 1 167 0 0 0 1 0 0.39 0.34 2 NA NA NA NA NA NA NA NA 31.57 30.41 69.59 0 1 2 Whitelist SKCM-US 0.62 0.59 NA NA 0.59 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 2 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 18 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 19 2535027 48181922 1 2 167 1 1 0 0 0 0.57 0.78 4 NA 0.04 4 3 4 5 3 3 31.57 0.5 99.33 1 2 1 Whitelist SKCM-US 0.68 0.93 NA 0.04 0.64 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 4 0.01 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 20 NA NA 0 0 167 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.81 NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 21 NA NA 0 0 167 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.9 NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 22 NA NA 0 0 167 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 0 0 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::e36c9411-773b-4a8e-9b43-895b3cb044c7 X 119259563 141729222 3 6 167 1 1 0 1 3 0.8 0.59 4 0 0 4 3 4 12 4 5 31.57 52.55 43.81 7 2 1 Whitelist SKCM-US 0.62 0.81 0 0 0.84 1 No SKCM-US e36c9411-773b-4a8e-9b43-895b3cb044c7 SKCM 0.97 1.8 Skin-Melanoma NA 9 0.03 NA 2 SKCM-US DO37515 TCGA-GN-A262 e36c9411-773b-4a8e-9b43-895b3cb044c7 female alive C44.5 47 NA 3664 NA Included Skin-Melanoma SKCM US 0 120.53 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 1 154304345 248004133 2 2 34 0 0 1 1 0 0.57 0.19 5 0 0 5 3 5 8 4 6 46.78 96.82 0.21 250 3 2 Whitelist SKCM-US 0.68 0.41 0 0 0.64 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 4 0.06 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 2 NA NA 0 0 34 0 0 0 0 0 NA 0.53 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA 0.76 0 NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 3 17996105 20636147 2 2 34 0 0 1 1 0 0.57 0.3 4 0 0 4 4 4 6 5 5 46.78 96.83 0 34 4 6 Whitelist SKCM-US 0.68 0.54 0 0 0.64 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 4 0.06 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 4 115559668 118314518 4 4 34 1 0 1 2 0 0.57 0.07 2 0 0 NA NA NA NA NA NA 46.78 1.44 98.54 129 1 2 Whitelist SKCM-US 0.68 0.22 0 0 0.64 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 8 0.12 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 5 24707770 24744093 1 1 34 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 46.78 0 99.85 78 2 NA Whitelist SKCM-US 0.62 0.9 NA NA 0.59 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 2 0.03 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 6 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 7 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 8 53201420 71092036 4 4 34 1 1 0 2 0 0.57 0 1 0 0 NA NA NA 4 3 3 46.78 45.52 54.48 110 1 NA Whitelist SKCM-US 0.68 0 0 0 0.64 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 8 0.12 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 9 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 10 NA NA 0 0 34 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.43 NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 11 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 12 NA NA 0 0 34 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 1 NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 13 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 14 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 15 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 16 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 17 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 18 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 19 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 20 NA NA 0 0 34 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.38 NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 21 NA NA 0 0 34 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA 0.04 NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a 22 NA NA 0 0 34 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist SKCM-US NA NA NA NA NA 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 0 0 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 SKCM-US::fa099993-ef30-4eff-a8fb-aa41b5ea671a X 146338766 147994499 1 1 34 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 46.78 100 0 0 1 NA Whitelist SKCM-US 0.62 1 NA NA 0.59 0 No SKCM-US fa099993-ef30-4eff-a8fb-aa41b5ea671a SKCM 0.38 2.47 Skin-Melanoma NA 2 0.03 stopgain,17_7576897_A_G,CN:2 2 SKCM-US DO37782 TCGA-GN-A26C fa099993-ef30-4eff-a8fb-aa41b5ea671a male deceased C44.5 77 821 NA NA Included Skin-Melanoma SKCM US 1 27.01 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 1 106386779 110472223 2 2 332 1 0 1 0 0 0.57 0 2 0 0 NA NA NA 41 13 13 39.91 34.52 65.48 2 1 2 Whitelist STAD-US 0.68 0.02 0 0 0.64 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 4 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 2 9254169 220466625 1 20 332 1 13 0 0 6 0 0.28 23 0 0 23 7 11 23 7 11 39.91 37.63 59.55 1 3 2 Whitelist STAD-US 17_3 0.01 0.52 0 0 0 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 34 0.05 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 3 4802945 186280725 1 24 332 2 15 0 0 7 0 0.67 31 0 0 31 12 20 32 12 20 39.91 5.76 94.2 19 2 3 Whitelist STAD-US 2 0.01 0.87 0 0 0 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 41 0.06 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 4 1715962 175680447 1 4 332 1 2 0 0 1 0.3 0 6 0 0 6 3 6 7 3 3 39.91 99.6 0.22 0 1 2 Whitelist STAD-US 0.54 0 0 0 0.59 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 7 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 5 110794744 166729305 7 7 332 2 1 2 2 0 0.93 1 11 0 0 11 3 4 18 4 4 39.91 54.56 42.74 0 1 2 Whitelist STAD-US 0.96 1 0 0 0.95 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 14 0.02 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 6 29811846 157623369 1 5 332 0 5 0 0 0 0 0 7 0 0 7 5 7 8 5 5 39.91 18.15 81.6 2 2 3 Whitelist STAD-US 0.1 0.01 0 0 0.07 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 10 0.02 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 7 16590286 17039701 3 3 332 0 3 0 0 0 0.03 0.01 4 0 0 4 0 3 28 13 13 39.91 13.3 86.47 0 2 3 Whitelist STAD-US 0.41 0.03 0 0 0.33 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 6 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 8 128085545 128987359 2 3 332 0 2 0 0 1 0.11 0.8 6 0 0 6 3 6 16 5 5 39.91 13.88 86.12 0 3 4 Whitelist STAD-US 0.62 0.95 0 0 0.48 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 5 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 9 15254826 15436789 2 2 332 0 2 0 0 0 0.11 0.03 4 0 0 4 3 4 17 7 7 39.91 68 31.87 0 3 2 Whitelist STAD-US 0.54 0.12 0 0 0.48 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 4 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 10 928722 62008371 1 4 332 0 4 0 0 0 0.01 0.01 5 0 0 5 5 5 6 5 5 39.91 45.79 54.03 0 2 3 Whitelist STAD-US 0.21 0.05 0 0 0.16 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 8 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 11 34804625 63648740 1 5 332 0 2 0 0 3 0.11 0.19 6 0 0 6 6 6 10 8 8 39.91 74.29 25.29 0 1 2 Whitelist STAD-US 0.93 0.41 0 0 0.48 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 7 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 12 24064615 98708265 48 56 332 10 16 10 12 8 0.57 0 66 0 0 66 4 4 72 4 4 39.91 74.52 21.74 3 1 16 Whitelist STAD-US 17 0.68 0 0 0 0.64 0 Low confidence STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA With other complex events 104 0.16 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 13 30969347 99319808 1 6 332 0 6 0 0 0 0 0.55 8 0 0 8 8 8 9 9 9 39.91 0.99 99.01 0 2 3 Whitelist STAD-US 0.04 0.78 0 0 0.03 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 12 0.02 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 14 21184441 21204990 2 2 332 0 2 0 0 0 0.11 0.63 1 0 0 NA NA NA 11 9 9 39.91 0.27 98.82 0 2 NA Whitelist STAD-US 0.54 0.85 0 0 0.48 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 4 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 15 67343393 80933788 1 5 332 1 2 0 0 2 0.3 0.4 3 0 0 NA NA NA NA NA NA 39.91 0.02 99.81 0 2 3 Whitelist STAD-US 0.62 0.65 0 0 0.59 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 8 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 16 6237018 21330868 2 5 332 2 0 1 1 1 0.57 0.09 9 0 0 9 5 9 24 10 11 39.91 65.53 29.8 0 2 0 Whitelist STAD-US 0.68 0.24 0 0 0.64 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 9 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 17 48341217 72770355 2 6 332 0 0 1 1 4 0.57 0.01 9 0 0 9 6 6 19 9 9 39.91 10.36 89.63 0 2 3 Whitelist STAD-US 2 0.68 0.03 0 0 0.64 0 Linked to low confidence STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA Canonical without polyploidization 8 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 18 19161638 19206918 1 1 332 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 4 5 39.91 67.19 27.96 0 2 3 Whitelist STAD-US 0.62 0.07 NA NA 0.59 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 2 0 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 19 10712554 45384330 1 8 332 0 5 1 0 2 0.01 0.16 15 0 0 15 7 8 15 7 7 39.91 43.94 47.19 0 2 3 Whitelist STAD-US 0.54 0.37 0 0 0.19 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 14 0.02 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 20 15590028 15759769 2 2 332 2 0 0 0 0 0.11 0.02 2 0 0 NA NA NA 15 9 9 39.91 4.51 94.5 0 1 2 Whitelist STAD-US 0.54 0.08 0 0 0.48 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 4 0.01 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 21 NA NA 0 0 332 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 0 0 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d 22 19896172 41716307 1 14 332 0 3 0 0 11 0.03 0 9 0 0 9 5 9 11 6 6 39.91 73.69 25.64 0 2 1 Whitelist STAD-US 0.54 0 0 0 0.33 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 17 0.03 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0aecac64-5982-4d76-8f31-958f6a00951d X NA NA 0 0 332 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US 0aecac64-5982-4d76-8f31-958f6a00951d STAD 0.44 1.75 Stomach-AdenoCA NA 0 0 NA 31 STAD-US DO38871 TCGA-CD-5802 0aecac64-5982-4d76-8f31-958f6a00951d male alive C16.0 58 NA 9 NA Included Stomach-AdenoCA STAD US 0 0.3 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 1 77333629 152952486 3 3 208 0 2 1 0 0 0.3 0 10 0 0 10 7 10 15 8 8 56.12 4.08 92.94 0 3 2 Whitelist STAD-US 0.62 0.02 0 0 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 6 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 2 101189993 207792558 9 9 208 2 3 2 2 0 0.95 0.62 19 0 0 19 5 7 21 5 7 56.12 60.18 39.71 0 3 2 Whitelist STAD-US 0.97 0.83 0 0 0.97 0 Low confidence STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA With other complex events 18 0.04 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 3 60585468 60800975 4 4 208 4 0 0 0 0 0.01 0.01 8 0 0 8 4 4 25 4 7 56.12 48.81 48.03 0 0 1 Whitelist STAD-US 0.21 0.04 0 0 0.16 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 8 0.02 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 4 91354801 91908092 3 3 208 2 1 0 0 0 0.3 0.12 3 0 0 NA NA NA 8 3 5 56.12 99.7 0.18 0 1 2 Whitelist STAD-US 0.62 0.31 0 0 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 6 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 5 121676470 121736492 1 1 208 0 1 0 0 0 0.39 0.01 1 0 NA NA NA NA NA NA NA 56.12 97.33 0 0 3 NA Whitelist STAD-US 0.62 0.03 0 NA 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 2 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 6 148322674 163348459 1 3 208 2 0 0 0 1 0.11 0.14 6 0 0 6 3 3 16 4 6 56.12 34.49 65.34 0 2 1 Whitelist STAD-US 0.62 0.34 0 0 0.48 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 5 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 7 109798326 110724771 2 4 208 4 0 0 0 0 0.01 0.04 5 0 0 5 3 5 18 6 7 56.12 74.57 22.88 0 4 6 Whitelist STAD-US 0.21 0.15 0 0 0.16 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 8 0.02 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 8 38410763 129492841 52 55 208 10 15 13 14 3 0.78 0 88 0 0 88 3 6 98 4 4 56.12 20.19 76.38 0 2 8 Whitelist STAD-US 0.82 0 0 0 0.84 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 107 0.26 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 9 21957230 21983833 1 1 208 1 0 0 0 0 0.39 0.37 2 0 NA NA NA NA 5 3 4 56.12 44.89 55 0 0 2 Whitelist STAD-US 0.62 0.62 0 NA 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 2 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 10 80613535 83086866 2 6 208 0 2 0 0 4 0.11 0.87 9 0 0 9 5 7 10 5 6 56.12 99.82 0 0 3 5 Whitelist STAD-US 0.62 1 0 0 0.48 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 8 0.02 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 11 69795641 78826393 1 2 208 1 0 1 0 0 0.57 0.87 4 0 0 4 3 4 13 3 4 56.12 23.03 76.42 0 11 4 Whitelist STAD-US 0.68 1 0 0 0.64 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 4 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 12 41889664 43181179 1 5 208 1 0 1 0 3 0.57 0.87 3 0 0 NA NA NA 8 3 5 56.12 99.92 0 0 3 4 Whitelist STAD-US 10 0.68 1 0 0 0.64 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 7 0.02 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 13 29728530 53972399 2 2 208 1 1 0 0 0 0.57 1 4 0 0 4 0 3 4 0 3 56.12 73.44 12.41 0 2 3 Whitelist STAD-US 0.68 1 0 0 0.64 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 4 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 14 37620059 80997635 1 4 208 3 0 0 0 1 0.03 0.43 4 0 0 4 3 4 6 3 3 56.12 83.88 0.21 0 2 1 Whitelist STAD-US 0.54 0.67 0 0 0.33 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 7 0.02 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 15 NA NA 0 0 208 0 0 0 0 0 NA 0.39 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.64 NA NA NA 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 16 78582955 78826648 2 2 208 2 0 0 0 0 0.11 0.51 6 0 0 6 5 6 13 5 7 56.12 13.23 82.03 0 1 0 Whitelist STAD-US 0.54 0.76 0 0 0.48 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 4 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 17 NA NA 0 0 208 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 5 0 0 0 0 0 0 0 0 Whitelist STAD-US NA 1 0 NA NA 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 18 71567350 73673561 1 1 208 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA 5 3 3 56.12 29.53 70.43 0 1 2 Whitelist STAD-US 0.62 0.41 NA NA 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 2 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 19 NA NA 0 0 208 0 0 0 0 0 NA 0.45 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.69 NA NA NA 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 20 NA NA 0 0 208 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.59 NA NA NA 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 21 16437979 19785195 1 2 208 0 1 0 0 1 0.39 0.33 1 0 NA NA NA NA NA NA NA 56.12 0 68.27 0 2 NA Whitelist STAD-US 0.68 0.58 0 NA 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 3 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 22 NA NA 0 0 208 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::0b4e8d73-459d-4930-9d1a-abb8d53e1844 X 10468351 138504568 1 3 208 2 1 0 0 0 0.3 0.04 7 0.03 0 7 3 7 8 4 4 56.12 98.25 1.75 0 1 2 Whitelist STAD-US 0.62 0.13 0.03 0 0.59 0 No STAD-US 0b4e8d73-459d-4930-9d1a-abb8d53e1844 STAD 0.64 2.72 Stomach-AdenoCA NA 6 0.01 NA 3 STAD-US DO38847 TCGA-CG-5724 0b4e8d73-459d-4930-9d1a-abb8d53e1844 male deceased C16.3 59 366 NA NA Included Stomach-AdenoCA STAD US 1 12.04 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 1 155099449 156001909 3 3 313 0 3 0 0 0 0.03 0.25 6 0 0 6 3 3 41 6 8 75.72 82.51 17.49 0 6 4 Whitelist STAD-US 0.41 0.49 0 0 0.33 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 2 85245117 85921732 13 15 313 4 5 1 3 2 0.44 0.26 17 0 0 17 3 7 42 5 6 75.72 87.58 12.33 0 4 5 Whitelist STAD-US 11 0.62 0.5 0 0 0.64 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 28 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 3 12123697 12654057 2 2 313 0 2 0 0 0 0.11 0.15 2 0 0 NA NA NA 20 5 6 75.72 61.95 37.85 0 4 6 Whitelist STAD-US 0.54 0.35 0 0 0.48 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 4 6815664 181160884 1 6 313 0 5 0 0 1 0 0 14 0 0 14 4 4 16 4 4 75.72 72.7 24.9 0 2 3 Whitelist STAD-US 0.25 0 0 0 0.07 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 5 85673816 175159134 1 9 313 2 7 0 0 0 0 0.03 18 0 0 18 7 11 20 7 7 75.72 99.71 0.16 0 4 6 Whitelist STAD-US 0.12 0.1 0 0 0.08 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 6 30271712 157786893 11 33 313 4 1 1 5 22 0.2 0 48 0 0 48 5 12 56 5 12 75.72 51.23 45.89 0 2 5 Whitelist STAD-US 11_13 0.87 0 0 0 0.59 0 Low confidence STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA With other complex events 44 0.07 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 7 106714900 117011436 2 2 313 0 0 1 1 0 0.57 0.21 7 0 0 7 3 5 30 5 16 75.72 99.19 0.59 0 6 7 Whitelist STAD-US 0.68 0.43 0 0 0.64 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 8 14956623 15012640 2 2 313 0 0 1 1 0 0.57 0.02 4 0 0 4 0 3 12 3 3 75.72 72.42 27.57 0 1 2 Whitelist STAD-US 0.68 0.08 0 0 0.64 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 9 86241551 133768238 1 7 313 1 2 1 0 3 0.57 0.38 13 0 0 13 3 5 20 3 5 75.72 88.13 8.79 0 5 4 Whitelist STAD-US 0.68 0.63 0 0 0.64 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 10 14710620 131823830 12 15 313 2 3 4 3 3 0.88 0.01 29 0 0 29 5 8 30 5 8 75.72 93.16 6.66 0 6 4 Whitelist STAD-US 0.93 0.04 0 0 0.91 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 27 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 11 17850371 130169015 7 23 313 3 2 0 2 16 0.44 0 56 0 0 56 5 7 61 5 7 75.72 78.53 20.91 0 4 5 Whitelist STAD-US 13_6 0.62 0 0 0 0.64 0 Linked to low confidence STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA With other complex events 30 0.05 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 12 41050787 112986379 1 3 313 1 2 0 0 0 0.3 0.02 4 0 0 4 3 4 5 3 5 75.72 99.98 0 0 3 4 Whitelist STAD-US 0.62 0.07 0 0 0.59 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 13 27261037 79173979 1 13 313 0 4 1 0 8 0.04 0 17 0 0 17 5 9 26 5 9 75.72 79.45 20.55 0 3 6 Whitelist STAD-US 11_6 0.54 0.01 0 0 0.36 0 Linked to low confidence STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 14 24756909 105972351 1 15 313 3 7 1 1 3 0.05 0.1 17 0 0 17 9 10 18 9 10 75.72 99.04 0.04 0 3 4 Whitelist STAD-US 0.54 0.27 0 0 0.46 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 27 0.04 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 15 34773861 69571178 1 4 313 0 4 0 0 0 0.01 0.12 8 0 0 8 8 8 9 9 9 75.72 99.88 0 0 3 4 Whitelist STAD-US 0.21 0.31 0 0 0.16 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 16 195857 11647690 1 2 313 0 2 0 0 0 0.11 0.02 4 NA 0.04 4 4 4 6 5 5 75.72 37.74 57.28 0 4 6 Whitelist STAD-US 0.54 0.08 NA 0.04 0.48 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 17 27261014 68948488 1 9 313 2 5 1 0 1 0.07 0.86 14 0 0 14 7 14 16 7 7 75.72 68.22 27.34 0 4 3 Whitelist STAD-US 0.41 0.99 0 0 0.48 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 18 55597772 55692342 1 1 313 0 1 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 75.72 0 99.96 0 2 NA Whitelist STAD-US 0.62 0.02 NA NA 0.59 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 19 12797594 56158690 1 7 313 0 4 0 0 3 0.01 0.41 12 0 0 12 5 6 12 5 5 75.72 92.72 0 0 5 6 Whitelist STAD-US 0.62 0.66 0 0 0.16 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 20 47846009 48551314 3 4 313 0 0 1 2 1 0.3 0 4 0 0 4 3 4 24 3 6 75.72 67.19 26.52 0 8 9 Whitelist STAD-US 0.54 0 0 0 0.59 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 21 42758624 43128443 1 1 313 0 1 0 0 0 0.39 0.06 2 0 NA NA NA NA 8 5 5 75.72 77.35 0 0 6 8 Whitelist STAD-US 0.62 0.19 0 NA 0.59 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 22 22768792 23317243 4 4 313 0 1 2 1 0 0.57 0.43 3 0 0 NA NA NA 6 4 4 75.72 1.35 98.65 0 2 4 Whitelist STAD-US 0.68 0.68 0 0 0.64 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 X 7347752 7697377 3 3 313 2 0 1 0 0 0.3 0.7 3 0 0 NA NA NA 21 5 7 75.72 95.34 1.08 0 2 1 Whitelist STAD-US 0.62 0.89 0 0 0.59 0 No STAD-US 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 STAD 0.3 3.61 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:2 3 STAD-US DO38655 TCGA-BR-6456 1ca3c5e0-32b0-4467-8ec0-ca212e35d2b3 female alive C16.2 74 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 1 168926416 237215102 2 2 176 0 0 1 1 0 0.57 0.33 3 0 0 NA NA NA 9 5 5 36.33 64.19 32.84 0 3 4 Whitelist STAD-US 0.68 0.58 0 0 0.64 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 4 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 2 69806854 178563072 2 3 176 0 0 1 1 1 0.57 0.22 3 0 0 NA NA NA 9 4 4 36.33 24.09 75.8 0 2 1 Whitelist STAD-US 0.62 0.45 0 0 0.64 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 5 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 3 60053650 60741368 4 4 176 4 0 0 0 0 0.01 0 10 0 0 10 7 10 20 7 7 36.33 32.01 67.94 0 1 0 Whitelist STAD-US 0.21 0 0 0 0.16 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 8 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 4 103060675 103502114 1 1 176 1 0 0 0 0 0.39 0.54 2 0 NA NA NA NA 6 6 6 36.33 11.9 88.08 1 1 2 Whitelist STAD-US 0.62 0.77 0 NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 5 44022761 44057192 1 1 176 0 0 0 1 0 0.39 0 1 0 NA NA NA NA 4 0 0 36.33 73.31 24 0 5 NA Whitelist STAD-US 0.62 0.02 0 NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 6 148391408 148451131 1 1 176 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA 4 3 3 36.33 53.55 46.31 0 0 1 Whitelist STAD-US 0.62 0.13 0 NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 7 32662163 115078160 1 2 176 2 0 0 0 0 0.11 0.87 6 0 0 6 4 6 7 5 7 36.33 87.15 12.63 0 3 2 Whitelist STAD-US 0.54 1 0 0 0.48 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 4 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 8 55867992 73540586 3 3 176 0 0 1 2 0 0.3 0 8 0 0 8 4 6 25 4 6 36.33 79.92 20.08 0 1 3 Whitelist STAD-US 0.62 0.02 0 0 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 9 NA NA 0 0 176 0 0 0 0 0 NA 0.33 NA 0.32 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.58 0.32 NA NA 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 10 91144610 91164356 1 1 176 1 0 0 0 0 0.39 0.37 1 0 NA NA NA NA NA NA NA 36.33 18.86 80.96 0 2 NA Whitelist STAD-US 0.62 0.62 0 NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 11 23752922 127273713 1 11 176 1 1 1 1 7 1 0 7 0 0 7 5 7 7 5 5 36.33 0.11 99.47 0 2 1 Whitelist STAD-US 0.98 0.01 0 0 1 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 15 0.04 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 12 72807261 127074655 3 3 176 1 0 1 1 0 0.8 1 2 0 0 NA NA NA NA NA NA 36.33 8.8 91.12 0 1 2 Whitelist STAD-US 0.87 1 0 0 0.84 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 13 NA NA 0 0 176 0 0 0 0 0 NA 0.53 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.76 NA NA NA 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 14 45676949 95979475 1 5 176 2 0 0 0 3 0.11 0.27 3 0 0 NA NA NA NA NA NA 36.33 0.03 99.06 0 2 1 Whitelist STAD-US 3 0.62 0.52 0 0 0.48 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 7 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 15 45005028 61843484 1 3 176 3 0 0 0 0 0.03 0.03 3 0 0 NA NA NA 8 3 3 36.33 17.43 82.47 0 2 1 Whitelist STAD-US 0.41 0.12 0 0 0.33 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 16 329942 79161981 1 7 176 5 0 0 0 2 0 0.15 11 0 0 11 4 6 12 4 5 36.33 16.53 83.31 0 2 1 Whitelist STAD-US 0.47 0.35 0 0 0.07 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 12 0.03 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 17 NA NA 0 0 176 0 0 0 0 0 NA 0.34 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.59 NA NA NA 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 18 NA NA 0 0 176 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 19 34831447 54945985 1 1 176 0 1 0 0 0 0.39 0.09 4 0 0 4 3 4 7 3 4 36.33 42.68 57.15 0 5 3 Whitelist STAD-US 0.62 0.25 0 0 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 20 45357684 45541605 1 1 176 1 0 0 0 0 0.39 0.11 1 0 NA NA NA NA 7 4 7 36.33 99.02 0.01 0 3 NA Whitelist STAD-US 0.62 0.28 0 NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 21 27249958 36537405 1 2 176 0 0 1 1 0 0.57 0.07 1 0 0 NA NA NA NA NA NA 36.33 0 77.35 0 2 NA Whitelist STAD-US 0.68 0.2 0 0 0.64 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 4 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 22 25904559 25924743 1 1 176 1 0 0 0 0 0.39 0.16 1 NA NA NA NA NA NA NA NA 36.33 38.13 50.76 0 2 NA Whitelist STAD-US 0.62 0.36 NA NA 0.59 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::1e1cdf72-820f-48a4-8fb6-89575d07cde9 X 7322628 139133940 1 6 176 0 0 1 1 4 0.57 0.73 3 0.01 0.01 NA NA NA NA NA NA 36.33 94.03 5.97 0 1 2 Whitelist STAD-US 0.93 0.9 0.01 0.01 0.64 0 No STAD-US 1e1cdf72-820f-48a4-8fb6-89575d07cde9 STAD 0.33 2.04 Stomach-AdenoCA NA 8 0.02 NA 2 STAD-US DO48040 TCGA-D7-8570 1e1cdf72-820f-48a4-8fb6-89575d07cde9 male alive C16.0 44 NA 243 NA Included Stomach-AdenoCA STAD US 0 7.99 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 1 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 3 60107359 89476228 1 2 28 2 0 0 0 0 0.11 1 1 NA 0 NA NA NA NA NA NA 3.08 0 99.83 0 2 NA Whitelist STAD-US 0.54 1 NA 0 0.48 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 4 148239621 148386681 1 1 28 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 3.08 0.12 99.87 1 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 5 21697382 58305919 1 2 28 0 2 0 0 0 0.11 0.69 1 NA 0 NA NA NA NA NA NA 3.08 0 99.86 1 2 NA Whitelist STAD-US 0.54 0.89 NA 0 0.48 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 6 44720942 159708319 1 2 28 0 1 0 1 0 0.57 0 3 0 0 NA NA NA NA NA NA 3.08 0.73 99.12 1 2 3 Whitelist STAD-US 0.68 0.01 0 0 0.64 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 7 124635506 124813020 1 1 28 0 0 1 0 0 0.39 0.06 1 NA NA NA NA NA NA NA NA 3.08 0.3 99.47 0 2 NA Whitelist STAD-US 0.62 0.19 NA NA 0.59 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 8 37677586 37735696 1 1 28 0 1 0 0 0 0.39 0.17 2 NA NA NA NA NA 7 3 6 3.08 64.63 31.95 1 2 4 Whitelist STAD-US 0.62 0.38 NA NA 0.59 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 9 5281479 139781001 1 2 28 1 1 0 0 0 0.57 0.3 1 NA 0.04 NA NA NA NA NA NA 3.08 0 99.3 1 2 NA Whitelist STAD-US 0.68 0.55 NA 0.04 0.64 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 11 NA NA 0 0 28 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.63 NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 12 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 13 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 16 51965487 51978032 1 1 28 1 0 0 0 0 0.39 0.17 1 NA NA NA NA NA NA NA NA 3.08 0 99.43 0 2 NA Whitelist STAD-US 0.62 0.39 NA NA 0.59 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 17 70612447 70626517 1 1 28 0 1 0 0 0 0.39 0.54 1 NA NA NA NA NA NA NA NA 3.08 0.12 99.85 0 2 NA Whitelist STAD-US 0.62 0.77 NA NA 0.59 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 18 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 20 NA NA 0 0 28 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.7 NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 X 98500990 101596502 1 2 28 0 1 0 1 0 0.57 0.17 1 0 0 NA NA NA NA NA NA 3.08 0 99.78 0 2 NA Whitelist STAD-US 0.68 0.38 0 0 0.64 0 No STAD-US 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 STAD 0.42 2.07 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO38404 TCGA-BR-6452 27988b3e-cde1-4f4b-82a1-6d8ad08db8e9 female alive C16.2 78 NA 29 NA Included Stomach-AdenoCA STAD US 0 0.95 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 1 113560029 116347739 1 1 99 0 1 0 0 0 0.39 0.02 3 NA NA NA NA NA 8 3 3 46.26 48.37 48.59 0 1 3 Whitelist STAD-US 0.62 0.09 NA NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 2 55952568 142778028 1 2 99 0 2 0 0 0 0.11 0.28 5 0 0 5 3 5 8 5 6 46.26 60.84 36.48 0 3 2 Whitelist STAD-US 0.54 0.52 0 0 0.48 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 3 60140146 60216661 2 2 99 2 0 0 0 0 0.11 0.23 3 0 0 NA NA NA 14 6 11 46.26 0.48 99.49 0 1 0 Whitelist STAD-US 0.54 0.47 0 0 0.48 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 4 91672920 92370183 1 2 99 2 0 0 0 0 0.11 0.07 4 NA 0 4 4 4 7 5 5 46.26 0.41 99.37 0 1 2 Whitelist STAD-US 0.54 0.2 NA 0 0.48 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 5 59098459 59209063 1 1 99 1 0 0 0 0 0.39 0.02 2 NA NA NA NA NA 4 3 3 46.26 97.33 0 0 0 1 Whitelist STAD-US 0.62 0.09 NA NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 6 2071155 148334681 1 3 99 3 0 0 0 0 0.03 0.53 4 0.02 0.11 4 4 4 5 5 5 46.26 0.09 99.68 0 1 2 Whitelist STAD-US 0.41 0.76 0.03 0.11 0.33 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 6 0.03 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 7 118667426 119284021 2 2 99 0 0 1 1 0 0.57 0 1 0 0 NA NA NA 13 5 6 46.26 99.65 0.13 0 3 NA Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 8 NA NA 0 0 99 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.2 NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 9 1273053 106799638 35 35 99 10 8 7 10 0 0.86 0 63 0 0 63 4 8 67 5 6 46.26 54.4 45.47 1 0 4 Whitelist STAD-US 0.92 0 0 0 0.9 0 Low confidence STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA With other complex events 70 0.35 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 10 NA NA 0 0 99 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.26 NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 11 22736610 25272747 3 3 99 0 1 1 1 0 0.8 0.47 4 0 0 4 4 4 10 5 5 46.26 64.48 35.09 0 0 2 Whitelist STAD-US 0.87 0.71 0 0 0.84 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 6 0.03 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 12 NA NA 0 0 99 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.26 NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 13 NA NA 0 0 99 0 0 0 0 0 NA 0.27 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.51 NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 14 66682594 66944360 1 1 99 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 46.26 0.24 83.84 0 2 3 Whitelist STAD-US 0.62 0.63 NA NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 15 NA NA 0 0 99 0 0 0 0 0 NA 0.36 NA 0 NA NA NA NA 9 7 9 0 0 0 0 0 0 Whitelist STAD-US NA 0.61 0 NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 16 78860203 79139842 2 2 99 2 0 0 0 0 0.11 0.05 6 0 0 6 5 6 12 5 5 46.26 0.65 93.92 0 1 0 Whitelist STAD-US 0.54 0.16 0 0 0.48 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 17 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 18 7523675 8581405 1 1 99 0 1 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 46.26 95.35 0 0 1 NA Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 19 12830111 12905595 1 1 99 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 46.26 51.63 41.09 0 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 20 14831977 15186086 1 1 99 1 0 0 0 0 0.39 0.17 3 0 NA NA NA NA 9 6 7 46.26 92.96 0 0 3 5 Whitelist STAD-US 0.62 0.38 0 NA 0.59 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 21 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 22 NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::283776cd-32e8-4a79-bed1-1411c9d3a9e0 X NA NA 0 0 99 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 283776cd-32e8-4a79-bed1-1411c9d3a9e0 STAD 0.9 2.47 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38731 TCGA-F1-6875 283776cd-32e8-4a79-bed1-1411c9d3a9e0 male deceased C16.3 79 2197 NA NA Included Stomach-AdenoCA STAD US 1 72.27 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 1 58341556 245855821 1 3 94 2 1 0 0 0 0.3 0.12 4 0 0 4 4 4 5 5 5 17.46 0.05 99.95 0 1 2 Whitelist STAD-US 0.62 0.31 0 0 0.59 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 6 0.03 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 2 32631150 203682926 1 5 94 5 0 0 0 0 0 1 10 0 0 10 10 10 11 11 11 17.46 0.49 99.42 0 1 2 Whitelist STAD-US 0.1 1 0 0 0.07 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 10 0.05 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 3 40999807 60897931 2 8 94 2 0 1 1 4 0.57 0 20 0 0 20 11 16 25 11 11 17.46 0.85 99.1 0 1 0 Whitelist STAD-US 0.87 0 0 0 0.64 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 12 0.06 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 4 116591804 189942054 1 2 94 2 0 0 0 0 0.11 0.09 3 NA 0 NA NA NA NA NA NA 17.46 0.49 99.5 0 2 1 Whitelist STAD-US 0.54 0.26 NA 0 0.48 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 5 116604389 116640789 1 1 94 0 1 0 0 0 0.39 0.53 1 0 NA NA NA NA NA NA NA 17.46 0 99.86 0 2 NA Whitelist STAD-US 0.62 0.76 0 NA 0.59 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 6 162561493 163171609 1 2 94 2 0 0 0 0 0.11 0.38 5 0 0 5 4 5 8 4 4 17.46 0.31 99.54 0 1 2 Whitelist STAD-US 0.54 0.63 0 0 0.48 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 7 109796156 158343317 1 6 94 5 0 0 0 1 0 0.35 11 0 0 11 5 9 12 5 9 17.46 69.86 29.92 0 2 1 Whitelist STAD-US 0.04 0.61 0 0 0.07 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 11 0.06 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 8 34480839 119677307 1 2 94 1 1 0 0 0 0.57 0.81 4 0 0 4 4 4 5 5 5 17.46 99.99 0 0 3 4 Whitelist STAD-US 0.68 0.96 0 0 0.64 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 9 8999329 102855534 1 4 94 4 0 0 0 0 0.01 0.42 4 0 0 4 4 4 7 6 6 17.46 7 92.86 0 1 2 Whitelist STAD-US 0.21 0.67 0 0 0.16 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 8 0.04 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 10 77207916 77918385 1 3 94 3 0 0 0 0 0.03 1 6 0 0 6 6 6 8 8 8 17.46 0.33 99.52 0 1 2 Whitelist STAD-US 0.41 1 0 0 0.33 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 6 0.03 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 11 28025472 101280688 1 5 94 3 2 0 0 0 0.14 0.21 6 0 0 6 3 6 7 3 3 17.46 0.47 99.11 0 2 3 Whitelist STAD-US 0.62 0.44 0 0 0.59 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 10 0.05 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 12 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 13 105927601 106083700 1 1 94 1 0 0 0 0 0.39 0.77 2 NA NA NA NA NA NA NA NA 17.46 0.14 99.86 0 1 2 Whitelist STAD-US 0.62 0.93 NA NA 0.59 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 14 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 15 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 16 6689696 78851030 1 7 94 5 2 0 0 0 0.02 0.01 12 0 0 12 5 12 13 5 5 17.46 0.47 99.44 0 1 2 Whitelist STAD-US 0.41 0.06 0 0 0.33 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 14 0.07 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 17 37819778 39607789 2 6 94 0 1 1 0 4 0.57 0 9 0 0 9 3 4 10 3 4 17.46 0.67 99.33 0 2 30 Whitelist STAD-US 3 0.68 0.02 0 0 0.64 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 8 0.04 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 18 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 19 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 20 14629637 14889016 2 2 94 2 0 0 0 0 0.11 0 3 0 0 NA NA NA 11 3 3 17.46 98.66 0.36 0 0 1 Whitelist STAD-US 0.54 0.01 0 0 0.48 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 21 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 22 NA NA 0 0 94 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2b4f014f-74e9-4dda-a1ad-abcbd124fc44 X 7229036 121847021 1 5 94 5 0 0 0 0 0 0.24 1 0 0 NA NA NA NA NA NA 17.46 85.87 14.13 0 1 NA Whitelist STAD-US 0.1 0.48 0 0 0.07 0 No STAD-US 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 STAD 0.56 2.02 Stomach-AdenoCA NA 10 0.05 NA 2 STAD-US DO47997 TCGA-D7-A4YX 2b4f014f-74e9-4dda-a1ad-abcbd124fc44 male alive C16.1 63 NA 244 NA Included Stomach-AdenoCA STAD US 0 8.03 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 1 165253918 173167696 4 5 408 0 3 1 0 1 0.11 0.03 8 0 0 8 4 4 31 6 9 66.23 43.72 56.28 0 5 6 Whitelist STAD-US 0.45 0.1 0 0 0.48 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 9 0.01 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 2 744061 80962231 20 57 408 5 7 2 6 37 0.42 0 52 0 0 52 5 9 66 5 10 66.23 78.13 19.16 5 3 5 Whitelist STAD-US 12_4 0.68 0 0 0 0.63 0 Low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA With other complex events 77 0.09 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 3 70868302 78679803 9 10 408 1 2 5 1 1 0.19 0.85 30 0 0 30 3 5 46 5 6 66.23 56.96 39.87 0 30 22 Whitelist STAD-US 0.62 0.98 0 0 0.59 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 19 0.02 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 4 1493041 19429270 3 4 408 0 1 1 1 1 0.8 0 6 0.31 0 6 6 6 10 7 7 66.23 21.4 78.5 0 3 4 Whitelist STAD-US 1 0 0.31 0 0.84 0 Linked to low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA After polyploidization 7 0.01 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 5 32900019 145588634 1 8 408 2 1 1 1 3 0.9 0 10 0 0 10 3 5 16 3 5 66.23 84.18 13.16 0 4 3 Whitelist STAD-US 12 0.87 0.02 0 0 0.92 0 Linked to low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA With other complex events 13 0.02 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 6 NA NA 0 0 408 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 7 66144208 66207541 2 2 408 1 1 0 0 0 0.57 0 4 0.02 0 4 3 4 7 3 3 66.23 99.93 0 0 3 2 Whitelist STAD-US 0.68 0 0.02 0 0.64 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 4 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 8 15990826 56539208 1 2 408 1 1 0 0 0 0.57 0 2 0 0 NA NA NA 5 3 3 66.23 67.14 29.44 0 2 5 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 4 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 9 26612492 26645984 1 1 408 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 66.23 99.3 0 0 4 5 Whitelist STAD-US 0.62 0 NA NA 0.59 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 2 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 10 83825888 84983845 1 2 408 2 0 0 0 0 0.11 0.04 4 0 0 4 4 4 13 5 5 66.23 99.72 0.1 0 2 3 Whitelist STAD-US 0.54 0.15 0 0 0.48 0 Linked to low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA Canonical without polyploidization 4 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 11 33449427 73516085 1 10 408 2 2 0 0 6 0.26 0.29 9 0 0 9 4 6 13 5 8 66.23 15.89 83.55 0 2 4 Whitelist STAD-US 0.86 0.53 0 0 0.59 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 14 0.02 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 12 7030656 104650534 103 169 408 27 25 24 27 66 0.97 0 243 0 0 243 6 8 244 6 8 66.23 40.83 55.43 7 2 11 Whitelist STAD-US 10_2 0.86 0 0 0 0.98 0 Low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA With other complex events 272 0.33 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 13 112982784 113585706 1 1 408 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 66.23 99.84 0 0 4 6 Whitelist STAD-US 0.62 0 NA NA 0.59 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 2 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 14 NA NA 0 0 408 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 15 NA NA 0 0 408 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.03 NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 16 79235572 79760364 1 1 408 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 66.23 99.9 0.01 0 3 7 Whitelist STAD-US 0.62 0.02 NA NA 0.59 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 2 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 17 NA NA 0 0 408 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 18 19843664 28235520 2 14 408 2 0 0 0 12 0.11 0.02 12 0 0 12 3 6 18 3 4 66.23 13.93 80.81 0 3 2 Whitelist STAD-US 12 0.81 0.08 0 0 0.48 0 Linked to low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA With other complex events 16 0.02 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 19 NA NA 0 0 408 0 0 0 0 0 NA 1 NA 0 NA NA NA NA 7 3 3 0 0 0 0 0 0 Whitelist STAD-US NA 1 0 NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 20 34476364 57596716 43 85 408 8 15 7 13 42 0.24 0 82 0 0 82 3 4 85 3 4 66.23 87.23 5.74 1 3 49 Whitelist STAD-US 12_2 0.62 0 0 0 0.59 0 Linked to low confidence STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA With other complex events 128 0.16 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 21 NA NA 0 0 408 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 22 NA NA 0 0 408 0 0 0 0 0 NA 0.64 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.85 NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::2d291fa3-f0fd-4bc1-91a6-783863714190 X NA NA 0 0 408 0 0 0 0 0 NA 0 NA NA NA NA NA NA 6 3 4 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US 2d291fa3-f0fd-4bc1-91a6-783863714190 STAD 0.62 3.54 Stomach-AdenoCA NA 0 0 NA 46 STAD-US DO38807 TCGA-EQ-5647 2d291fa3-f0fd-4bc1-91a6-783863714190 female deceased C16.3 86 19 NA NA Included Stomach-AdenoCA STAD US 1 0.62 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 1 78441943 246323847 1 2 45 2 0 0 0 0 0.11 0.58 2 NA 0 NA NA NA NA NA NA 91.69 99.99 0.01 0 2 3 Whitelist STAD-US 0.54 0.8 NA 0 0.48 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 4 0.04 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 2 191067294 240515751 1 3 45 1 2 0 0 0 0.3 0.79 6 0 0 6 4 6 9 5 5 91.69 99.89 0 0 4 5 Whitelist STAD-US 0.62 0.94 0 0 0.59 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 6 0.07 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 3 60597104 95719229 1 2 45 1 0 0 1 0 0.57 1 3 0 0 NA NA NA NA NA NA 91.69 68.48 31.39 0 2 3 Whitelist STAD-US 0.68 1 0 0 0.64 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 4 0.04 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 4 NA NA 0 0 45 0 0 0 0 0 NA 0.77 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.93 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 5 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 6 NA NA 0 0 45 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.76 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 7 5112898 131901776 2 2 45 0 0 1 1 0 0.57 0.3 10 0 0.01 10 5 10 11 5 11 91.69 99.77 0 0 4 5 Whitelist STAD-US 0.68 0.55 0 0.01 0.64 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 4 0.04 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 8 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 9 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 10 77833985 83628920 1 2 45 2 0 0 0 0 0.11 0.15 3 0 0 NA NA NA 8 4 4 91.69 99.83 0 0 1 3 Whitelist STAD-US 0.54 0.35 0 0 0.48 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 4 0.04 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 11 NA NA 0 0 45 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.9 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 12 73730180 73869360 1 1 45 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 91.69 99.92 0 0 3 4 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 2 0.02 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 13 63155140 63188478 1 1 45 0 1 0 0 0 0.39 0.67 1 NA NA NA NA NA NA NA NA 91.69 100 0 0 5 NA Whitelist STAD-US 0.62 0.87 NA NA 0.59 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 2 0.02 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 14 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 16 78380826 78865736 3 3 45 3 0 0 0 0 0.03 0.03 6 0 0 6 0 6 7 3 3 91.69 99.36 0.29 0 2 3 Whitelist STAD-US 0.41 0.12 0 0 0.33 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 6 0.07 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 17 37921947 38544556 6 6 45 4 1 1 0 0 0.11 0 5 0 0 5 3 5 12 3 5 91.69 100 0 0 46 47 Whitelist STAD-US 0.54 0 0 0 0.48 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 12 0.13 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 18 5116515 5140477 1 1 45 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 91.69 0.03 99.93 0 2 3 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 2 0.02 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 19 NA NA 0 0 45 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.81 NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 20 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 22 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::30a82e9f-2a2d-4a66-bdb1-26b881c21d01 X NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 STAD 0.8 3.43 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47747 TCGA-HU-A4G6 30a82e9f-2a2d-4a66-bdb1-26b881c21d01 male alive C16.0 74 NA 374 NA Included Stomach-AdenoCA STAD US 0 12.3 STAD-US::337819d2-5281-4b41-9583-a476924bc837 1 205509044 219049530 3 3 210 1 1 1 0 0 0.8 0.01 3 0 0 NA NA NA 26 17 18 64.42 81.7 14.98 0 3 4 Whitelist STAD-US 7 0.87 0.06 0 0 0.84 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 2 63345548 242350181 1 12 210 4 4 0 1 3 0.13 0.9 7 0 0 7 5 7 11 5 5 64.42 99.82 0.09 0 3 2 Whitelist STAD-US 0.45 1 0 0 0.55 0 Linked to low confidence STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA Canonical without polyploidization 21 0.05 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 3 16465303 197306776 1 14 210 6 6 0 1 1 0.02 0.68 25 0 0 25 5 20 26 5 7 64.42 54.47 45.39 4 2 3 Whitelist STAD-US 0.54 0.88 0 0 0.33 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 27 0.06 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 4 6879539 187669269 1 4 210 2 2 0 0 0 0.26 0 7 0 0 7 3 5 8 3 6 64.42 48.73 51.17 0 4 3 Whitelist STAD-US 0.62 0.01 0 0 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 8 0.02 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 5 25348267 132102563 1 5 210 2 0 0 0 3 0.11 0.09 4 0 0 4 4 4 6 5 5 64.42 28.56 71.31 0 1 2 Whitelist STAD-US 0.68 0.24 0 0 0.48 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 7 0.02 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 6 20138021 151484461 7 14 210 2 3 1 1 7 0.67 0 28 0 0 28 4 8 36 4 11 64.42 99.01 0.81 0 4 3 Whitelist STAD-US 14_2 0.9 0 0 0 0.74 0 Low confidence STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA With other complex events 21 0.05 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 7 1473977 127642246 1 12 210 2 3 0 0 7 0.14 0.36 12 0 0 12 4 9 13 5 5 64.42 99.66 0.13 0 4 5 Whitelist STAD-US 2_X 0.62 0.61 0 0 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 17 0.04 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 8 37377447 145521023 1 15 210 6 4 0 0 5 0.01 0.06 23 0 0 23 5 5 26 5 5 64.42 92.15 3.9 0 3 8 Whitelist STAD-US 0.62 0.18 0 0 0.23 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 25 0.06 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 9 15225938 139770352 1 6 210 2 3 0 0 1 0.14 1 11 0 0 11 3 9 14 4 4 64.42 65.44 31.99 0 3 1 Whitelist STAD-US 0.62 1 0 0 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 11 0.03 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 10 43843093 98387881 1 9 210 0 6 0 0 3 0 0.87 10 0 0 10 10 10 13 12 13 64.42 77.08 19.5 0 3 4 Whitelist STAD-US 0.15 1 0 0 0.03 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 15 0.04 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 11 65241995 65627704 2 2 210 0 0 1 1 0 0.57 0.51 3 0 0 NA NA NA 7 5 7 64.42 99.57 0 0 3 4 Whitelist STAD-US 0.68 0.75 0 0 0.64 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 12 81181147 113640448 5 7 210 1 2 1 1 2 0.9 0.87 2 0 0 NA NA NA 5 3 3 64.42 98.86 1.03 0 2 3 Whitelist STAD-US 8 0.96 1 0 0 0.92 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 12 0.03 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 13 73801873 87824014 1 2 210 0 2 0 0 0 0.11 0.57 4 0 0 4 4 4 5 5 5 64.42 100 0 0 4 5 Whitelist STAD-US 0.54 0.79 0 0 0.48 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 14 56203717 106008233 1 6 210 1 2 0 0 3 0.3 0.11 10 0 0 10 4 7 17 5 7 64.42 65.96 33.12 0 2 3 Whitelist STAD-US 0.93 0.28 0 0 0.59 0 Linked to low confidence STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA With other complex events 9 0.02 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 15 80998761 81013042 1 1 210 1 0 0 0 0 0.39 0.03 2 NA NA NA NA NA NA NA NA 64.42 0.01 99.99 0 2 3 Whitelist STAD-US 0.62 0.12 NA NA 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 2 0 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 16 24987472 67049646 8 9 210 3 1 2 2 1 0.8 0 11 0 0 11 5 9 14 5 9 64.42 14.63 80.85 0 2 3 Whitelist STAD-US 0.85 0.01 0 0 0.84 0 Low confidence STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA With other complex events 17 0.04 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 17 2357085 79942160 1 18 210 0 6 2 0 10 0.01 0 22 0 0 22 5 6 23 5 7 64.42 16.84 78.51 0 3 2 Whitelist STAD-US 14_8 0.54 0 0 0 0.16 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 26 0.06 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 18 NA NA 0 0 210 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.16 NA NA NA 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 0 0 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 19 55704721 55750389 2 2 210 1 1 0 0 0 0.57 0 4 0 0 4 0 4 11 4 9 64.42 82.83 9.89 0 4 3 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 20 14667205 15071165 3 3 210 2 0 1 0 0 0.3 0.05 6 0 0 6 3 6 15 4 4 64.42 91.64 0.35 0 2 3 Whitelist STAD-US 0.62 0.16 0 0 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 6 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 21 24362212 25284772 1 2 210 1 0 0 1 0 0.57 1 3 NA 0 NA NA NA 5 4 5 64.42 28 49.35 0 2 0 Whitelist STAD-US 0.68 1 NA 0 0.64 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 22 28214883 32593514 1 2 210 0 2 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 64.42 1.48 98.52 0 2 4 Whitelist STAD-US 0.54 1 NA 0 0.48 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::337819d2-5281-4b41-9583-a476924bc837 X 7242173 96816117 1 4 210 2 1 0 0 1 0.3 0.53 7 0 0 7 4 4 10 5 6 64.42 39.48 60.31 0 2 1 Whitelist STAD-US 0.68 0.76 0 0 0.59 0 No STAD-US 337819d2-5281-4b41-9583-a476924bc837 STAD 0.32 2.97 Stomach-AdenoCA NA 7 0.02 stopgain,17_7578500_A_G,CN:2 3 STAD-US DO47911 TCGA-BR-8690 337819d2-5281-4b41-9583-a476924bc837 female alive C16.0 54 NA 18 NA Included Stomach-AdenoCA STAD US 0 0.59 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 1 56906848 230755559 1 8 148 1 1 0 1 5 0.8 0.54 13 0 0 13 4 7 15 4 7 73.68 86.65 10.38 1 3 4 Whitelist STAD-US 0.62 0.77 0 0 0.84 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 11 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 2 18794721 228687502 1 9 148 5 1 0 0 3 0.01 0.88 11 0 0 11 4 11 13 5 5 73.68 77.03 20.25 11 2 3 Whitelist STAD-US 0.62 1 0 0 0.19 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 3 60004028 188612298 1 8 148 6 1 0 0 1 0 0.63 11 0 0 11 5 5 12 5 5 73.68 31.37 68.49 1 3 0 Whitelist STAD-US 0.28 0.84 0 0 0.09 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 4 98703205 98785519 2 2 148 2 0 0 0 0 0.11 0.14 3 0 0 NA NA NA 7 5 5 73.68 0.19 99.8 0 2 0 Whitelist STAD-US 0.54 0.33 0 0 0.48 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 5 155679254 165863998 4 4 148 1 1 1 1 0 1 0.04 3 0 0 NA NA NA 11 5 5 73.68 67.45 32.41 0 4 2 Whitelist STAD-US 1 0.14 0 0 1 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 6 31746185 102042207 1 5 148 2 1 0 1 1 0.57 0.29 16 0 0 16 4 5 22 4 6 73.68 71.76 28.09 0 2 4 Whitelist STAD-US 0.68 0.54 0 0 0.64 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 7 51114028 158394455 1 6 148 2 1 1 0 2 0.57 1 10 0 0 10 3 3 14 3 5 73.68 99.74 0.1 0 5 2 Whitelist STAD-US 0.62 1 0 0 0.64 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 8 89717348 141962037 1 2 148 2 0 0 0 0 0.11 0.04 2 NA 0 NA NA NA 5 3 3 73.68 63.73 36.27 0 2 5 Whitelist STAD-US 0.54 0.13 NA 0 0.48 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 9 97706860 127344617 1 4 148 2 2 0 0 0 0.26 1 6 0 0 6 3 4 7 3 3 73.68 99.33 0 0 5 3 Whitelist STAD-US 0.62 1 0 0 0.59 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 10 30093456 112365853 1 11 148 5 0 1 0 5 0.01 0 25 0 0 25 3 5 28 3 5 73.68 40.92 58.96 1 2 1 Whitelist STAD-US 2 0.54 0 0 0 0.19 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 11 NA NA 0 0 148 0 0 0 0 0 NA 0.33 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.58 0 NA NA 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 12 NA NA 0 0 148 0 0 0 0 0 NA 0.56 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.79 0 NA NA 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 13 NA NA 0 0 148 0 0 0 0 0 NA 0.5 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.74 NA NA NA 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 14 21740041 37428380 1 4 148 1 1 1 1 0 1 1 6 0 0 6 4 6 8 4 4 73.68 96.12 0.21 0 3 4 Whitelist STAD-US 1 1 0 0 1 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 15 97264273 98340810 1 1 148 1 0 0 0 0 0.39 0.45 2 NA NA NA NA NA 8 3 4 73.68 95.09 0 0 3 4 Whitelist STAD-US 0.62 0.69 NA NA 0.59 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 16 11303942 78887275 1 5 148 3 2 0 0 0 0.14 0.3 7 0 0 7 7 7 8 8 8 73.68 99.91 0 0 4 3 Whitelist STAD-US 0.62 0.54 0 0 0.59 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 17 NA NA 0 0 148 0 0 0 0 0 NA NA NA NA NA NA NA NA 6 6 6 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 18 8269880 8322434 1 1 148 1 0 0 0 0 0.39 0.8 2 NA NA NA NA NA 7 4 4 73.68 95.29 0.07 0 2 4 Whitelist STAD-US 0.62 0.95 NA NA 0.59 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 19 29683001 35291752 1 4 148 2 0 0 0 2 0.11 0 11 0 0 11 4 6 14 4 4 73.68 88.52 4.2 0 2 3 Whitelist STAD-US 0.68 0.01 0 0 0.48 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 20 8702728 33097195 1 6 148 3 0 0 1 2 0.11 0 8 0 0 8 3 4 9 3 3 73.68 99.01 0 0 5 8 Whitelist STAD-US 0.54 0 0 0 0.48 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 21 NA NA 0 0 148 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.9 NA NA NA 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 22 29773217 29853624 1 1 148 0 0 1 0 0 0.39 0 2 0 0 NA NA NA 12 3 5 73.68 87.61 12.39 0 4 5 Whitelist STAD-US 0.62 0 0 0 0.59 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::35496e4e-598f-4ffc-b11e-8edaeb676079 X 6983829 7967102 4 5 148 4 0 0 0 1 0.01 0 12 0 0 12 3 7 28 5 7 73.68 96.54 0.13 0 3 1 Whitelist STAD-US 0.45 0.02 0 0 0.16 0 No STAD-US 35496e4e-598f-4ffc-b11e-8edaeb676079 STAD 0.62 3.62 Stomach-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 STAD-US DO38547 TCGA-D7-6528 35496e4e-598f-4ffc-b11e-8edaeb676079 female alive C16.2 70 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 1 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 2 148643191 205519133 1 3 29 1 2 0 0 0 0.3 0.73 6 0 0 6 3 4 7 3 3 15.38 0.15 99.74 0 2 1 Whitelist STAD-US 0.62 0.91 0 0 0.59 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 6 0.1 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 3 178603426 179787042 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 15.38 0.6 99.35 0 1 2 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 4 173890408 174202222 3 3 29 1 0 1 1 0 0.8 0 4 0 0 4 4 4 15 15 15 15.38 1.41 98.39 0 1 2 Whitelist STAD-US 0.87 0 0 0 0.84 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 6 0.1 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 5 59381990 59554909 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 15.38 0 99.87 0 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 7 15713479 34653127 2 2 29 0 0 1 1 0 0.57 0.07 2 0.06 0 NA NA NA 8 5 5 15.38 97.45 0 0 2 3 Whitelist STAD-US 0.68 0.2 0.07 0 0.64 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 8 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 10 89542788 91017978 2 2 29 0 0 1 1 0 0.57 0.04 1 0 0 NA NA NA 7 7 7 15.38 0.41 99.41 0 2 NA Whitelist STAD-US 0.68 0.14 0 0 0.64 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 11 100708978 117857144 1 2 29 1 1 0 0 0 0.57 0.39 4 NA 0 4 3 4 5 3 3 15.38 11.68 87.89 0 2 1 Whitelist STAD-US 0.68 0.64 NA 0 0.64 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 12 52374214 53142161 2 2 29 0 0 1 1 0 0.57 0.15 1 0 0 NA NA NA 4 3 4 15.38 99.85 0.07 0 1 NA Whitelist STAD-US 0.68 0.36 0 0 0.64 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 16 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 17 62880831 70521192 1 2 29 2 0 0 0 0 0.11 0.18 4 NA 0 4 4 4 5 5 5 15.38 1.89 98.11 0 1 2 Whitelist STAD-US 0.54 0.4 NA 0 0.48 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 4 4 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::39dd61a8-cd17-4df3-ae17-61e239eb00bd X NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 39dd61a8-cd17-4df3-ae17-61e239eb00bd STAD 0.36 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38535 TCGA-CG-4474 39dd61a8-cd17-4df3-ae17-61e239eb00bd female alive C16.3 67 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 1 1000784 180558593 1 13 156 0 5 0 0 8 0 0.29 7 0 0 7 3 5 8 4 5 40.78 0.09 99.9 0 2 3 Whitelist STAD-US 20 0.06 0.54 0 0 0.07 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 18 0.06 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 2 16207103 202780100 1 7 156 0 4 0 0 3 0.01 0.31 7 0 0 7 5 7 7 5 7 40.78 0.1 99.8 1 2 3 Whitelist STAD-US 0.13 0.56 0 0 0.16 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 11 0.04 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 3 122214638 194316193 2 3 156 0 0 1 1 1 0.57 0.53 8 0 0 8 5 8 14 5 5 40.78 44.42 52.42 0 2 3 Whitelist STAD-US 0.87 0.76 0 0 0.64 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 5 0.02 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 4 43125256 82757558 1 2 156 0 2 0 0 0 0.11 0 4 NA 0 4 4 4 5 5 5 40.78 99.86 0.12 0 1 2 Whitelist STAD-US 0.54 0.02 NA 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 5 43384041 127284788 1 4 156 1 3 0 0 0 0.11 0.07 4 0 0 4 3 4 4 3 3 40.78 97.31 0 0 1 0 Whitelist STAD-US 0.54 0.2 0 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 8 0.03 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 6 11505241 131133457 1 13 156 0 5 1 0 7 0.01 0.04 8 0 0 8 8 8 9 9 9 40.78 0.42 99.44 0 2 3 Whitelist STAD-US 11_20 0.54 0.14 0 0 0.19 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 19 0.06 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 7 17034879 132443759 1 6 156 1 3 1 0 1 0.28 0.37 4 0 0 4 4 4 9 6 6 40.78 0.42 99.36 0 2 3 Whitelist STAD-US 0.62 0.62 0 0 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 11 0.04 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 8 128306940 130858617 5 7 156 1 0 2 2 2 0.53 0.04 12 0 0 12 4 5 19 4 7 40.78 96.37 0.1 0 3 7 Whitelist STAD-US 0.62 0.14 0 0 0.64 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 12 0.04 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 9 9007586 114764575 1 5 156 0 4 0 0 1 0.01 0.41 7 0 0 7 5 7 9 6 6 40.78 40.34 56.54 0 2 1 Whitelist STAD-US 0.45 0.65 0 0 0.16 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 9 0.03 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 10 63299153 80561354 1 3 156 1 2 0 0 0 0.3 0.44 3 0 0 NA NA NA NA NA NA 40.78 0.09 99.72 0 2 1 Whitelist STAD-US 0.62 0.69 0 0 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 6 0.02 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 11 12244112 67243650 1 8 156 2 3 0 1 2 0.34 0.01 8 0 0 8 6 8 10 8 8 40.78 29.27 70.3 0 2 1 Whitelist STAD-US 0.62 0.03 0 0 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 14 0.04 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 12 15950717 15992667 1 1 156 0 1 0 0 0 0.39 0.45 1 0 NA NA NA NA NA NA NA 40.78 30.96 68.96 0 1 NA Whitelist STAD-US 0.62 0.69 0 NA 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 2 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 13 30948277 32326957 1 2 156 0 0 1 1 0 0.57 0.82 4 0 0 4 3 4 5 3 3 40.78 1.2 98.8 0 3 2 Whitelist STAD-US 0.68 0.96 0 0 0.64 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 14 69441461 69830106 1 1 156 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 40.78 99.09 0 0 1 NA Whitelist STAD-US 0.62 0.27 NA NA 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 2 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 15 30957336 51028081 1 4 156 1 1 1 0 1 0.8 0.33 7 0 0 7 5 7 11 5 5 40.78 34.08 65.76 0 2 1 Whitelist STAD-US 1 0.59 0 0 0.84 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 7 0.02 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 16 11273310 11459098 1 1 156 0 1 0 0 0 0.39 0.07 2 0.11 NA NA NA NA 7 7 7 40.78 99.56 0.34 0 1 2 Whitelist STAD-US 0.62 0.22 0.11 NA 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 2 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 17 60495378 61188887 4 4 156 2 0 2 0 0 0.26 0 5 0 0 5 4 5 15 6 6 40.78 65.89 29.65 0 1 2 Whitelist STAD-US 0.62 0.01 0 0 0.59 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 8 0.03 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 18 46478049 51010157 1 2 156 0 2 0 0 0 0.11 0.45 4 NA 0 4 4 4 6 5 5 40.78 19.92 75.44 0 2 3 Whitelist STAD-US 0.54 0.7 NA 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 19 1188597 59022221 1 7 156 0 5 0 0 2 0 0.04 5 0 0 5 4 5 5 4 4 40.78 41.39 51.16 0 2 3 Whitelist STAD-US 0.41 0.13 0 0 0.07 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 12 0.04 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 20 345372 49015072 1 11 156 3 3 0 0 5 0.11 0 9 0 0 9 7 9 9 7 7 40.78 98.63 0.4 0 3 2 Whitelist STAD-US 6 0.54 0 0 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 17 0.05 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 21 NA NA 0 0 156 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.9 NA NA NA 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 0 0 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 22 38289617 46544711 1 2 156 0 2 0 0 0 0.11 0 1 0 0 NA NA NA NA NA NA 40.78 0 100 0 2 NA Whitelist STAD-US 0.54 0.02 0 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::4e9d13da-438d-4b5e-8e86-67432b5e9471 X 7401495 7707615 1 2 156 2 0 0 0 0 0.11 0.1 1 0 0 NA NA NA NA NA NA 40.78 100 0 0 1 NA Whitelist STAD-US 0.54 0.26 0 0 0.48 0 No STAD-US 4e9d13da-438d-4b5e-8e86-67432b5e9471 STAD 0.54 1.68 Stomach-AdenoCA NA 4 0.01 frameshift_deletion,17_7577560_-_A,CN:1 2 STAD-US DO47929 TCGA-HU-8245 4e9d13da-438d-4b5e-8e86-67432b5e9471 male alive C16.2 72 NA 383 NA Included Stomach-AdenoCA STAD US 0 12.6 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 1 185672518 186911004 3 3 246 1 0 1 1 0 0.8 0.15 3 0 0 NA NA NA 4 4 4 14.47 1 99 0 2 1 Whitelist STAD-US 0.87 0.36 0 0 0.84 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 2 1840504 95654593 1 6 246 2 2 1 0 1 0.53 0.82 1 0 0 NA NA NA NA NA NA 14.47 0 99.89 0 2 NA Whitelist STAD-US 0.62 0.96 0 0 0.64 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 3 60552156 60646562 1 1 246 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 14.47 0.05 99.81 0 1 2 Whitelist STAD-US 0.62 0.01 0 NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 4 29649842 91515207 1 3 246 2 0 1 0 0 0.3 0.12 3 0 0 NA NA NA 6 3 4 14.47 1.71 98.17 0 2 1 Whitelist STAD-US 0.62 0.31 0 0 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 5 NA NA 0 0 246 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 6 28215328 141062702 7 24 246 2 2 2 1 17 0.93 0 20 0 0 20 5 6 33 5 8 14.47 41.13 56.04 3 2 1 Whitelist STAD-US 0.54 0 0 0 0.95 0 Low confidence STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA With other complex events 31 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 7 24323683 116135143 34 37 246 7 10 9 8 3 0.9 0 30 0 0 30 9 9 32 11 12 14.47 3.74 96.03 0 2 3 Whitelist STAD-US 0.98 0 0 0 0.92 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 71 0.14 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 False positive; manually removed STAD-US::53086e20-a727-40d6-b42d-8030109b5130 8 128527518 128777068 1 1 246 0 1 0 0 0 0.39 0.38 3 0 NA NA NA NA 5 4 5 14.47 59.35 37.13 0 3 2 Whitelist STAD-US 0.62 0.63 0 NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 9 12728078 36089491 4 5 246 1 2 0 1 1 0.57 0.25 8 0 0 8 4 5 10 6 6 14.47 11.5 87.81 0 2 1 Whitelist STAD-US 0.68 0.49 0 0 0.64 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 10 7636345 7652488 1 1 246 1 0 0 0 0 0.39 0.02 1 0 NA NA NA NA NA NA NA 14.47 0 99.84 0 2 NA Whitelist STAD-US 0.62 0.08 0 NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 11 47405387 98379119 1 3 246 1 2 0 0 0 0.3 0.02 5 0 0 5 3 5 5 3 5 14.47 0.18 99.39 0 2 0 Whitelist STAD-US 0.62 0.09 0 0 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 12 6986089 56351954 1 2 246 0 2 0 0 0 0.11 0.22 3 0 0 NA NA NA NA NA NA 14.47 0.05 99.93 0 2 3 Whitelist STAD-US 0.54 0.46 0 0 0.48 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 13 73557077 74012816 2 2 246 0 2 0 0 0 0.11 1 2 0 0 NA NA NA 8 8 8 14.47 1.21 84.64 0 2 3 Whitelist STAD-US 0.54 1 0 0 0.48 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 14 68412375 90417177 1 3 246 2 1 0 0 0 0.3 0.2 3 0 0 NA NA NA 5 5 5 14.47 22.79 61.3 0 2 1 Whitelist STAD-US 0.62 0.43 0 0 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 15 25408255 90452414 1 4 246 1 1 0 0 2 0.57 0.33 4 0 0 4 0 3 5 3 3 14.47 2.22 82.24 0 2 3 Whitelist STAD-US 0.62 0.59 0 0 0.64 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 16 30542347 71461227 1 2 246 1 1 0 0 0 0.57 0.23 1 0 0 NA NA NA NA NA NA 14.47 0 99.88 0 2 NA Whitelist STAD-US 0.68 0.46 0 0 0.64 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 17 3107404 39977217 32 43 246 6 8 6 12 11 0.39 0 24 0 0 24 4 10 27 4 5 14.47 29.14 66.42 1 1 2 Whitelist STAD-US 6 0.68 0 0 0 0.59 0 Low confidence STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA With other complex events 75 0.15 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 18 6172204 6188735 1 1 246 1 0 0 0 0 0.39 1 1 0 NA NA NA NA NA NA NA 14.47 2.51 97.45 0 2 NA Whitelist STAD-US 0.62 1 0 NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 19 15981990 19716748 2 3 246 0 0 1 1 1 0.57 0.64 1 NA 0 NA NA NA NA NA NA 14.47 12.16 87.41 0 2 NA Whitelist STAD-US 0.62 0.85 NA 0 0.64 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 20 14405101 15321955 1 3 246 3 0 0 0 0 0.03 0 3 0 0 NA NA NA NA NA NA 14.47 0.03 98.97 0 2 1 Whitelist STAD-US 0.41 0.01 0 0 0.33 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 21 NA NA 0 0 246 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.63 NA NA NA 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 22 41766607 41781905 1 1 246 0 1 0 0 0 0.39 0.38 1 NA NA NA NA NA NA NA NA 14.47 0 76.22 0 2 NA Whitelist STAD-US 0.62 0.63 NA NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::53086e20-a727-40d6-b42d-8030109b5130 X 147292497 147334548 1 1 246 0 0 1 0 0 0.39 0.56 1 0 NA NA NA NA NA NA NA 14.47 2.84 96.93 0 2 NA Whitelist STAD-US 0.62 0.79 0 NA 0.59 0 No STAD-US 53086e20-a727-40d6-b42d-8030109b5130 STAD 0.83 1.96 Stomach-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:2 2 STAD-US DO38603 TCGA-D7-6815 53086e20-a727-40d6-b42d-8030109b5130 female alive C16.2 70 NA 111 NA Included Stomach-AdenoCA STAD US 0 3.65 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 1 43676646 240124427 6 38 1150 3 2 0 1 32 0.34 0.04 46 0 0 46 9 16 57 9 9 77.44 87.59 12.4 4 4 3 Whitelist STAD-US 11_14_15_6_8 0.88 0.13 0 0 0.59 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 44 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 False positive; manually removed STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 2 29490700 81732001 4 11 1150 1 1 0 2 7 0.57 0.87 5 0 0 5 3 5 49 7 13 77.44 79.89 17.42 0 3 1 Whitelist STAD-US 20_7 0.98 1 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 15 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 3 83906659 165520150 9 13 1150 3 1 3 2 4 0.75 0.53 26 0 0 26 4 11 48 5 8 77.44 85.79 14.11 0 4 6 Whitelist STAD-US 11_7 0.8 0.76 0 0 0.83 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 22 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 4 68624535 100557398 4 5 1150 0 1 2 1 1 0.57 0.38 10 0 0 10 4 6 51 6 10 77.44 61.8 35.82 0 2 3 Whitelist STAD-US 0.68 0.63 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 9 0 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 5 53410286 157767053 15 20 1150 3 4 5 3 5 0.87 0.1 29 0 0 29 7 10 49 7 10 77.44 62.48 34.44 1 2 4 Whitelist STAD-US 0.68 0.27 0 0 0.9 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 35 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 False positive; manually removed STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 6 7731685 152831766 2 17 1150 0 0 2 2 13 0.26 0.95 34 0 0 34 13 17 48 13 13 77.44 83.03 16.83 1 3 4 Whitelist STAD-US 1_15 0.93 1 0 0 0.59 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 21 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 7 17657943 75547480 4 10 1150 1 1 1 1 6 1 0.01 9 0 0 9 6 9 32 6 6 77.44 82.1 17.66 0 3 4 Whitelist STAD-US 8 0.96 0.04 0 0 1 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 14 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 8 21266054 103900103 10 24 1150 3 3 2 2 14 0.94 0 33 0 0 33 9 11 55 14 15 77.44 87.96 11.89 1 4 3 Whitelist STAD-US 1_12_20_7 0.76 0.01 0 0 0.96 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 34 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 False positive; manually removed STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 9 8996441 18708947 3 7 1150 1 2 0 0 4 0.3 0.03 3 0 0 NA NA NA 25 7 7 77.44 91.46 5.43 0 3 4 Whitelist STAD-US 0.77 0.1 0 0 0.59 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 10 0 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 10 53191558 116299004 2 13 1150 0 2 1 1 9 0.57 0.2 16 0 0 16 4 5 35 6 11 77.44 54.28 42.3 1 2 4 Whitelist STAD-US 1_5 0.8 0.43 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 17 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 11 686421 122325231 1 33 1150 3 13 1 0 16 0 0.83 19 0 0 19 5 15 19 5 5 77.44 88.39 7.96 3 3 4 Whitelist STAD-US 1_13_20_7 0 0.97 0 0 0 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 50 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 12 47965497 122244787 2 4 1150 1 0 0 1 2 0.57 0.89 9 0 0 9 7 9 29 7 8 77.44 86.03 13.88 1 3 2 Whitelist STAD-US 1 0.68 1 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 6 0 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 13 40416455 109645992 5 11 1150 1 1 2 1 6 0.9 0.47 25 0 0 25 5 7 38 5 6 77.44 67.86 29.36 1 6 4 Whitelist STAD-US 0.68 0.71 0 0 0.92 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 16 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 14 21910299 106251175 1 28 1150 0 21 1 1 5 0 0.05 21 0 0 21 9 21 23 11 11 77.44 96.45 0.03 0 3 4 Whitelist STAD-US 1 0 0.17 0 0 0 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 51 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 15 29417192 101670491 4 14 1150 3 1 0 0 10 0.11 0.24 21 0 0 21 5 15 24 5 5 77.44 68.34 26.76 0 2 3 Whitelist STAD-US 1_6 0.81 0.48 0 0 0.48 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 18 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 16 189811 89826984 1 32 1150 5 15 0 0 12 0 0 41 0 0 41 6 18 41 6 6 77.44 88.25 11.08 1 4 3 Whitelist STAD-US 1_18_7 0 0.02 0 0 0 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 52 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 17 9703698 79150095 1 27 1150 2 13 2 2 8 0 0.01 27 0 0 27 8 19 29 8 19 77.44 69.23 26.3 1 4 3 Whitelist STAD-US 18 0.13 0.03 0 0 0.02 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 46 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 18 518539 70320166 3 17 1150 2 0 1 0 14 0.3 0.1 21 0 0 21 5 7 25 5 7 77.44 65.83 34.14 0 3 2 Whitelist STAD-US 17_5 0.62 0.26 0 0 0.59 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 20 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 19 1335997 58908317 1 25 1150 1 12 0 0 12 0 0.02 15 0 0 15 7 12 15 7 7 77.44 77.65 21.8 1 2 1 Whitelist STAD-US 11_18_20_6 0.02 0.1 0 0 0 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 38 0.02 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 20 30101824 57105676 3 25 1150 1 2 0 0 22 0.3 0 27 0 0 27 10 11 41 10 12 77.44 88.94 3.88 0 4 5 Whitelist STAD-US 1_11_17_5_7_8 0.96 0 0 0 0.59 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 28 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 False positive; manually removed STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 21 15908074 46609729 1 7 1150 0 6 0 0 1 0 0.35 8 0 0 8 8 8 9 9 9 77.44 77.35 0 0 3 4 Whitelist STAD-US 0.13 0.6 0 0 0.03 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 13 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae 22 44599485 50064421 2 2 1150 0 0 1 1 0 0.57 0.02 2 0 0 NA NA NA 17 9 9 77.44 86.47 1.49 0 2 3 Whitelist STAD-US 0.68 0.08 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 4 0 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::5b7e557a-6aee-4077-b3cd-c96179e643ae X 1565817 150877072 4 9 1150 1 2 0 1 5 0.57 0.03 1 0 0 NA NA NA NA NA NA 77.44 99.51 0 0 1 NA Whitelist STAD-US 0.85 0.11 0 0 0.64 0 No STAD-US 5b7e557a-6aee-4077-b3cd-c96179e643ae STAD 0.22 3.05 Stomach-AdenoCA NA 13 0.01 NA 3 STAD-US DO47753 TCGA-CD-8529 5b7e557a-6aee-4077-b3cd-c96179e643ae male alive C16.3 65 NA 4 NA Included Stomach-AdenoCA STAD US 0 0.13 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 1 32603752 248760143 2 15 413 1 1 4 4 5 0.31 0 53 0 0 53 9 19 78 9 21 67.68 89 10.8 0 3 4 Whitelist STAD-US 0.85 0 0 0 0.59 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 25 0.03 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 2 191573387 204495878 3 3 413 1 2 0 0 0 0.3 0.33 2 0 0 NA NA NA 51 13 18 67.68 99.38 0.52 0 3 4 Whitelist STAD-US 0.62 0.58 0 0 0.59 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 3 66372258 66768694 2 2 413 1 1 0 0 0 0.57 0.7 2 0 0 NA NA NA 32 7 12 67.68 99.55 0.1 0 4 6 Whitelist STAD-US 0.68 0.89 0 0 0.64 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 4 38554483 38912678 2 2 413 0 0 1 1 0 0.57 0 4 0 0 4 4 4 15 11 15 67.68 0.99 98.99 0 2 4 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 5 73771207 74088202 7 7 413 1 3 1 2 0 0.67 0.42 4 0 0 4 0 3 27 5 5 67.68 57.35 39.98 0 2 3 Whitelist STAD-US 0.77 0.66 0 0 0.74 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 6 22560709 167683682 1 20 413 1 10 0 0 9 0 0.84 27 0 0 27 15 24 29 15 24 67.68 98.58 1.29 0 4 5 Whitelist STAD-US 11_17 0.54 0.97 0 0 0 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 31 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 7 462479 156140671 1 15 413 0 13 1 1 0 0 0.32 31 0 0 31 5 13 32 5 13 67.68 82.91 16.87 6 3 4 Whitelist STAD-US 0 0.58 0 0 0 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 30 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 8 17507862 99431994 2 4 413 0 1 1 0 2 0.57 0.31 13 0 0 13 7 13 17 7 17 67.68 99.99 0 0 3 4 Whitelist STAD-US 0.68 0.56 0 0 0.64 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 9 130156705 130972853 3 3 413 0 3 0 0 0 0.03 0.2 9 0 0 9 3 5 22 9 14 67.68 99.86 0 0 5 3 Whitelist STAD-US 0.41 0.43 0 0 0.33 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 10 5810804 124150825 1 15 413 0 13 0 1 1 0 0.91 24 0 0 24 11 18 26 11 19 67.68 99.82 0 0 3 4 Whitelist STAD-US 0 1 0 0 0 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 29 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 11 2015155 118632987 1 22 413 0 16 0 0 6 0 0.03 35 0 0 35 15 23 42 15 23 67.68 99.8 0 0 3 4 Whitelist STAD-US 0 0.12 0 0 0 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 38 0.05 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 12 5197209 121876052 1 18 413 2 13 0 0 3 0 1 32 0 0 32 10 18 33 10 11 67.68 96.01 0.02 1 3 4 Whitelist STAD-US 0 1 0 0 0 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 33 0.04 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 13 27490758 97931271 1 6 413 0 4 0 0 2 0.01 0.18 8 0 0 8 5 8 9 5 9 67.68 100 0 0 4 5 Whitelist STAD-US 16 0.25 0.39 0 0 0.16 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 14 34761191 71989897 2 4 413 0 3 1 0 0 0.11 0.26 11 0 0 11 6 9 15 6 8 67.68 2.18 96.91 0 2 3 Whitelist STAD-US 0.54 0.5 0 0 0.48 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 15 44951001 45429974 2 2 413 0 2 0 0 0 0.11 0.55 2 0 0 NA NA NA 10 5 5 67.68 21.56 73.56 0 1 2 Whitelist STAD-US 0.54 0.78 0 0 0.48 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 16 57284825 84641398 1 5 413 0 5 0 0 0 0 0.88 10 0 0 10 9 10 15 9 15 67.68 2.08 97.81 0 2 4 Whitelist STAD-US 0.1 1 0 0 0.07 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 17 40948248 70741201 2 15 413 1 1 2 2 9 0.88 0 18 0 0 18 7 7 40 11 17 67.68 30.61 64.96 0 4 5 Whitelist STAD-US 6 0.62 0 0 0 0.91 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 18 19489464 19871325 2 6 413 0 2 0 0 4 0.11 0.54 3 0 0 NA NA NA 8 4 5 67.68 95.24 0 0 3 4 Whitelist STAD-US 17 0.68 0.77 0 0 0.48 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 19 18025573 19102509 8 8 413 1 4 2 1 0 0.39 0 14 0 0 14 3 5 41 6 11 67.68 10.18 80.72 0 2 3 Whitelist STAD-US 0.62 0 0 0 0.59 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 16 0.02 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 20 44396800 44940404 3 3 413 0 3 0 0 0 0.03 0.49 6 0 0 6 0 3 17 7 8 67.68 99.03 0 0 6 8 Whitelist STAD-US 0.41 0.74 0 0 0.33 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 21 33751460 34165055 2 2 413 1 0 1 0 0 0.57 0.36 3 0 0 NA NA NA 9 3 7 67.68 2.62 74.73 0 2 3 Whitelist STAD-US 0.68 0.62 0 0 0.64 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 22 24216542 50554553 1 7 413 0 5 0 0 2 0 0.35 8 0 0 8 4 7 10 4 7 67.68 98.54 0 0 3 4 Whitelist STAD-US 0.13 0.61 0 0 0.07 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::60879669-96c2-4710-82e0-0ae9d0e5b242 X 43483806 138777758 1 4 413 0 1 1 0 2 0.57 0 10 0 0 10 5 10 11 5 5 67.68 5.97 93.8 0 2 3 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 60879669-96c2-4710-82e0-0ae9d0e5b242 STAD 0.59 2.93 Stomach-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578529_C_A,CN:2 3 STAD-US DO47859 TCGA-BR-8373 60879669-96c2-4710-82e0-0ae9d0e5b242 female alive C16.1 65 NA 26 NA Included Stomach-AdenoCA STAD US 0 0.86 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 1 119235280 239786526 4 11 294 0 2 1 1 7 0.57 0 11 0 0 11 9 11 26 12 12 71.09 92.48 7.51 0 3 4 Whitelist STAD-US 11 0.62 0 0 0 0.64 1 High confidence STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA After polyploidization 15 0.03 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 2 32079889 242189444 1 19 294 5 0 1 1 12 0.04 0.46 17 0 0 17 8 8 18 8 10 71.09 99.89 0 0 3 4 Whitelist STAD-US 11_6_7 0.54 0.71 0 0 0.38 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 26 0.04 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 3 96558377 126292236 10 11 294 2 3 2 3 1 0.94 0 3 0 0 NA NA NA 21 5 9 71.09 99.85 0.01 0 3 1 Whitelist STAD-US 0.98 0 0 0 0.96 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 21 0.04 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 4 89688036 152335051 1 7 294 2 1 0 0 4 0.3 0.08 4 0 0 4 3 4 5 3 3 71.09 6.61 93.26 0 2 1 Whitelist STAD-US 6 0.62 0.23 0 0 0.59 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 10 0.02 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 5 56426055 127642329 1 5 294 2 1 0 0 2 0.3 0.34 9 0 0 9 3 4 13 3 4 71.09 56.24 41.06 0 2 0 Whitelist STAD-US 0.62 0.59 0 0 0.59 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 8 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 6 2239434 155081158 1 17 294 9 0 2 0 6 0 0.02 24 0 0 24 5 11 26 5 11 71.09 82.1 17.77 0 4 3 Whitelist STAD-US 2 0.1 0.08 0 0 0.02 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 28 0.05 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 7 32777131 148554716 1 11 294 5 0 0 0 6 0 0.12 19 0 0 19 6 12 28 6 12 71.09 96.7 0.01 0 3 2 Whitelist STAD-US 2 0.02 0.3 0 0 0.07 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 16 0.03 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 8 61600999 61662270 3 3 294 3 0 0 0 0 0.03 0.01 5 0 0 5 3 5 28 7 7 71.09 67.12 29.46 0 1 2 Whitelist STAD-US 0.41 0.04 0 0 0.33 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 6 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 9 15128656 68392684 2 4 294 0 1 2 1 0 0.57 0.1 9 0 0 9 6 9 11 6 11 71.09 83.18 16.12 0 2 4 Whitelist STAD-US 0.68 0.26 0 0 0.64 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 8 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 10 1269797 116551586 1 10 294 6 0 1 0 3 0 1 12 0 0 12 7 12 13 7 13 71.09 99.83 0.06 0 3 1 Whitelist STAD-US 0.54 1 0 0 0.09 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 17 0.03 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 11 2708193 95973110 1 7 294 3 0 1 0 3 0.11 0.89 10 0 0 10 5 10 11 5 11 71.09 99.18 0.27 0 4 3 Whitelist STAD-US 1 0.62 1 0 0 0.48 1 Linked to high confidence STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA With other complex events 11 0.02 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 12 14336989 14593324 2 2 294 1 1 0 0 0 0.57 0.49 3 0 0 NA NA NA 11 5 7 71.09 86.96 13.03 0 2 1 Whitelist STAD-US 0.68 0.74 0 0 0.64 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 4 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 13 NA NA 0 0 294 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.5 0 NA NA 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 14 68136116 97453248 1 7 294 2 0 0 0 5 0.11 0.04 3 0 0 NA NA NA 4 3 3 71.09 99.09 0 0 3 1 Whitelist STAD-US 9 0.77 0.14 0 0 0.48 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 9 0.02 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 15 82578690 91044017 1 1 294 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 71.09 26.51 73.36 0 3 NA Whitelist STAD-US 0.62 0.21 NA NA 0.59 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 2 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 16 NA NA 0 0 294 0 0 0 0 0 NA 0.37 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.62 0 NA NA 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 17 38032279 68129870 2 3 294 0 0 1 1 1 0.57 0.04 7 0 0 7 3 7 17 5 6 71.09 51.59 48.38 0 3 2 Whitelist STAD-US 0.87 0.15 0 0 0.64 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 5 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 18 1875598 19427543 12 12 294 2 5 2 3 0 0.57 0 20 0 0 20 6 15 24 6 6 71.09 18.47 76.88 7 3 4 Whitelist STAD-US 0.68 0 0 0 0.64 1 Low confidence STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA With other complex events 24 0.04 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 19 NA NA 0 0 294 0 0 0 0 0 NA 0.09 NA 0 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist STAD-US NA 0.25 0 NA NA 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 20 475658 35807278 1 4 294 2 1 0 0 1 0.3 1 8 0 0 8 4 7 11 4 7 71.09 93.11 0 0 4 5 Whitelist STAD-US 0.62 1 0 0 0.59 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 7 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 21 38780812 38813523 1 1 294 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 71.09 0.07 68.19 0 0 2 Whitelist STAD-US 0.62 1 NA NA 0.59 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 2 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 22 NA NA 0 0 294 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::647dc54f-a51b-40ea-9d97-c93598c2af71 X 31752976 77009659 1 4 294 3 0 0 0 1 0.03 0.02 1 0 0 NA NA NA NA NA NA 71.09 99.66 0 0 1 NA Whitelist STAD-US 0.54 0.07 0 0 0.33 1 No STAD-US 647dc54f-a51b-40ea-9d97-c93598c2af71 STAD 0.75 2.88 Stomach-AdenoCA NA 7 0.01 NA 3 STAD-US DO38226 TCGA-HF-7136 647dc54f-a51b-40ea-9d97-c93598c2af71 male alive C16.0 NA NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 1 21517069 189579067 1 4 85 1 1 1 0 1 0.8 1 8 0 0 8 3 8 10 3 3 35.43 8.82 91.18 0 2 1 Whitelist STAD-US 1 1 0 0 0.84 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 7 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 2 60264393 60281297 1 1 85 1 0 0 0 0 0.39 0.32 2 0 NA NA NA NA NA NA NA 35.43 0.01 99.89 0 1 2 Whitelist STAD-US 0.62 0.58 0 NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 3 60272713 60649280 1 1 85 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA 5 3 3 35.43 99.95 0 0 0 1 Whitelist STAD-US 0.62 0.32 NA NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 4 21062479 21105892 1 1 85 0 0 1 0 0 0.39 0.51 1 0 NA NA NA NA 4 3 4 35.43 92.51 7.38 0 1 NA Whitelist STAD-US 0.62 0.76 0 NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 5 59167444 59543809 1 2 85 2 0 0 0 0 0.11 0.82 5 0 0 5 5 5 5 5 5 35.43 99.85 0 0 1 0 Whitelist STAD-US 0.54 0.96 0 0 0.48 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 6 68567441 163000670 1 5 85 3 0 0 0 2 0.03 0 6 0 0 6 6 6 7 7 7 35.43 28.22 71.6 0 1 2 Whitelist STAD-US 0.45 0 0 0 0.33 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 7 NA NA 0 0 85 0 0 0 0 0 NA 1 NA 0.03 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 0.03 NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 8 NA NA 0 0 85 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 9 NA NA 0 0 85 0 0 0 0 0 NA 1 NA 0.51 NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist STAD-US NA 1 0.51 NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 10 85982825 129728054 9 10 85 2 2 2 3 1 0.95 0 7 0 0 7 7 7 11 9 9 35.43 3.42 96.28 0 2 1 Whitelist STAD-US 0.96 0 0 0 0.97 1 High confidence STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA Canonical without polyploidization 19 0.11 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 11 111466865 111566054 1 1 85 0 1 0 0 0 0.39 0.44 2 NA NA NA NA NA NA NA NA 35.43 0.07 99.34 0 2 3 Whitelist STAD-US 0.62 0.69 NA NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 12 50286881 61939145 2 3 85 1 0 0 1 1 0.57 0.06 5 0 0 5 5 5 9 6 6 35.43 16.17 80.09 0 2 1 Whitelist STAD-US 0.62 0.19 0 0 0.64 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 5 0.03 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 13 96914168 97056934 1 1 85 0 1 0 0 0 0.39 0.54 2 0 NA NA NA NA NA NA NA 35.43 0.12 99.88 0 2 3 Whitelist STAD-US 0.62 0.77 0 NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 14 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 15 NA NA 0 0 85 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.75 NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 16 6316758 7190708 1 3 85 2 1 0 0 0 0.3 0.29 4 0.11 0 4 3 4 5 3 3 35.43 0.66 99.23 0 1 0 Whitelist STAD-US 0.62 0.54 0.11 0 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 6 0.04 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 17 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 18 NA NA 0 0 85 0 0 0 0 0 NA 0.08 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.23 0.01 NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 19 NA NA 0 0 85 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.89 NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 20 14635581 14966752 1 1 85 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 35.43 98.51 0.53 0 2 3 Whitelist STAD-US 0.62 0.13 0 NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 21 20965958 21080836 1 1 85 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 35.43 77.11 0.24 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 22 NA NA 0 0 85 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::87c217d4-66f4-46ca-8244-7856ce658fd3 X 11257584 66636710 1 4 85 2 2 0 0 0 0.26 1 5 0 0 5 5 5 5 5 5 35.43 99.66 0.34 0 1 2 Whitelist STAD-US 0.62 1 0 0 0.59 1 No STAD-US 87c217d4-66f4-46ca-8244-7856ce658fd3 STAD 0.66 1.71 Stomach-AdenoCA NA 8 0.05 nonsynonymous_SNV,17_7577094_A_G,CN:1 2 STAD-US DO38831 TCGA-IN-7806 87c217d4-66f4-46ca-8244-7856ce658fd3 male alive C16.0 50 NA 209 NA Included Stomach-AdenoCA STAD US 0 6.88 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 1 78429708 78517561 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 4 4 4 29.69 10.82 89.17 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 2 99521239 99569020 1 1 29 0 1 0 0 0 0.39 0.51 2 NA NA NA NA NA NA NA NA 29.69 0.02 99.89 0 2 3 Whitelist STAD-US 0.62 0.75 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 3 88985324 193470455 5 6 29 3 0 1 1 1 0.28 0 10 0 0 10 7 10 13 7 8 29.69 88.95 7.89 0 3 2 Whitelist STAD-US 0.62 0 0 0 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 11 0.19 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 4 186726254 187450355 1 1 29 1 0 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 29.69 0.38 99.61 0 1 2 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 5 NA NA 0 0 29 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 6 73893935 73954408 1 1 29 0 1 0 0 0 0.39 0.25 2 NA NA NA NA NA 5 3 3 29.69 15.66 84.19 0 2 3 Whitelist STAD-US 0.62 0.49 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 7 110060787 110177329 1 1 29 1 0 0 0 0 0.39 0.67 2 NA NA NA NA NA 4 3 3 29.69 99.7 0.07 0 2 3 Whitelist STAD-US 0.62 0.87 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 8 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 9 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 10 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 11 2427773 3125159 1 1 29 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 29.69 0.52 99.05 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 12 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 14 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 15 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 16 78934804 79030124 1 1 29 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 29.69 0.11 99.54 0 1 2 Whitelist STAD-US 0.62 0.4 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 17 37454068 37741179 3 3 29 0 1 1 1 0 0.8 0 4 0 0 4 0 4 9 0 6 29.69 54.11 45.87 1 1 2 Whitelist STAD-US 0.87 0 0 0 0.84 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 6 0.1 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 19 NA NA 0 0 29 0 0 0 0 0 NA 0.44 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.69 NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8a24f1a3-4bab-4591-9676-7bee01d096c1 X 80425243 80770194 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 29.69 100 0 0 1 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8a24f1a3-4bab-4591-9676-7bee01d096c1 STAD 0.46 2.12 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO38671 TCGA-BR-A4J4 8a24f1a3-4bab-4591-9676-7bee01d096c1 male alive C16.3 39 NA 16 NA Included Stomach-AdenoCA STAD US 0 0.53 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 1 17246972 229690987 10 27 363 2 2 3 3 17 0.94 0 48 0 0 48 6 11 59 6 7 51.66 57.18 42.82 0 5 4 Whitelist STAD-US 0.87 0 0 0 0.96 1 Low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 37 0.05 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 2 44053706 226620541 1 18 363 6 2 1 1 8 0.08 0.03 23 0 0 23 5 13 24 5 6 51.66 20.36 79.53 0 3 2 Whitelist STAD-US 6 0.68 0.11 0 0 0.48 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 28 0.04 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 3 4166467 174904574 1 7 363 4 3 0 0 0 0.06 0 10 0 0 10 7 10 11 7 7 51.66 99.62 0.38 0 3 2 Whitelist STAD-US 0.54 0 0 0 0.48 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 14 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 4 4289129 173281572 1 5 363 2 2 0 0 1 0.26 0 17 0 0 17 3 6 19 3 6 51.66 70.06 27.45 0 2 3 Whitelist STAD-US 0.62 0 0 0 0.59 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 9 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 5 1313396 17276751 2 6 363 0 0 1 1 4 0.57 0.33 7 0 0 7 4 4 24 4 5 51.66 35.47 61.82 0 7 9 Whitelist STAD-US 13 0.62 0.58 0 0 0.64 1 Linked to low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 8 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 6 2131228 162922838 1 19 363 6 6 1 0 6 0.02 0.91 34 0 0 34 8 13 35 8 8 51.66 52.9 43.9 0 4 3 Whitelist STAD-US 2 0.54 1 0 0 0.33 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 32 0.04 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 7 17442614 157408589 1 4 363 0 3 0 0 1 0.03 0 8 0 0 8 4 4 10 5 5 51.66 74.6 22.71 0 3 4 Whitelist STAD-US 0.54 0 0 0 0.33 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 7 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 8 60606691 101621074 1 5 363 0 0 3 1 1 0.11 0 5 0 0 5 3 5 9 3 5 51.66 96.58 0 0 5 2 Whitelist STAD-US 0.62 0.02 0 0 0.48 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 9 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 9 31411590 34930964 2 3 363 0 1 1 0 1 0.57 0.68 3 0 0 NA NA NA 16 4 4 51.66 59.74 37.71 0 4 6 Whitelist STAD-US 0.62 0.88 0 0 0.64 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 5 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 10 39113087 106266056 1 7 363 4 3 0 0 0 0.06 0.1 13 0 0 13 7 13 19 7 7 51.66 58.34 38.31 0 3 2 Whitelist STAD-US 0.54 0.27 0 0 0.48 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 14 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 11 12725196 43348618 8 8 363 1 4 2 1 0 0.39 1 13 0 0 13 13 13 26 18 20 51.66 12.46 84.07 2 3 2 Whitelist STAD-US 0.62 1 0 0 0.59 1 High confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA Canonical without polyploidization 16 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 12 58094075 104538890 1 11 363 1 1 1 0 8 0.8 0.71 8 0 0 8 3 5 12 3 5 51.66 42.62 53.64 0 2 3 Whitelist STAD-US 13_16 0.62 0.9 0 0 0.84 1 Linked to low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 14 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 13 58047889 91889039 30 42 363 8 9 4 9 12 0.52 0 57 0 0 57 5 7 66 5 7 51.66 55.73 44.27 7 8 14 Whitelist STAD-US 0.87 0 0 0 0.64 1 Low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 72 0.1 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 14 20197653 51760534 2 5 363 0 2 0 0 3 0.11 0.45 14 0 0 14 3 6 25 5 9 51.66 36.54 47.54 0 4 2 Whitelist STAD-US 0.68 0.69 0 0 0.48 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 7 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 15 45588239 90529323 1 6 363 1 1 1 0 3 0.8 0.87 10 0 0 10 4 9 13 4 4 51.66 99.66 0.26 0 3 5 Whitelist STAD-US 1 0.93 1 0 0 0.84 1 Linked to low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 9 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 16 693417 62053802 6 6 363 2 1 1 2 0 0.88 0 8 0 0 8 5 8 15 5 7 51.66 33.66 65.71 2 2 1 Whitelist STAD-US 0.93 0.02 0 0 0.91 1 Low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA Canonical without polyploidization 12 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 17 1358751 56764164 1 6 363 2 3 0 0 1 0.14 0.87 12 0 0 12 9 12 15 9 9 51.66 2 93.54 0 2 3 Whitelist STAD-US 0.62 1 0 0 0.59 1 Linked to low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA Canonical without polyploidization 11 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 18 12079569 26348940 4 10 363 2 2 0 0 6 0.26 0 16 0 0 16 3 7 33 5 5 51.66 88.24 7.11 1 3 4 Whitelist STAD-US 1 0.68 0 0 0 0.59 1 Linked to low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 14 0.02 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 19 3088176 57557538 58 63 363 14 17 12 15 5 0.83 0 90 0 0 90 6 9 91 6 6 51.66 48.48 43.82 16 3 2 Whitelist STAD-US 17 0.91 0 0 0 0.87 1 Low confidence STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA With other complex events 121 0.17 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 20 14946706 15015276 2 2 363 1 1 0 0 0 0.57 0.86 1 0 0 NA NA NA 8 5 6 51.66 69.13 23.45 0 2 NA Whitelist STAD-US 0.68 0.99 0 0 0.64 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 4 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 21 23063718 46826886 1 5 363 2 1 0 0 2 0.3 0.01 9 0 0 9 6 9 13 6 6 51.66 40.11 26.49 0 2 1 Whitelist STAD-US 0.68 0.03 0 0 0.59 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 8 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 22 NA NA 0 0 363 0 0 0 0 0 NA 0.04 NA 0 NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist STAD-US NA 0.15 0 NA NA 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8b5746f9-dbee-40bd-9141-1081960cf286 X 35613719 46323762 4 4 363 2 0 1 1 0 0.57 0 2 0 0 NA NA NA 6 6 6 51.66 30.5 69.5 0 1 2 Whitelist STAD-US 0.68 0 0 0 0.64 1 No STAD-US 8b5746f9-dbee-40bd-9141-1081960cf286 STAD 0.27 2.91 Stomach-AdenoCA NA 8 0.01 NA 3 STAD-US DO38571 TCGA-D7-5579 8b5746f9-dbee-40bd-9141-1081960cf286 male alive C16.2 74 NA 138 NA Included Stomach-AdenoCA STAD US 0 4.54 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 1 6636540 246791625 1 49 507 0 16 2 1 30 0 0 43 0 0 43 16 23 43 16 18 34.05 26 74 0 2 3 Whitelist STAD-US 10_13_17_19_5 0.54 0.01 0 0 0 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 68 0.07 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 2 20412846 20938880 2 2 507 0 2 0 0 0 0.11 0.34 4 0 0 4 3 4 39 8 8 34.05 15.09 84.81 0 3 2 Whitelist STAD-US 0.54 0.59 0 0 0.48 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 4 0 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 3 31595663 61350790 2 2 507 0 0 1 1 0 0.57 0.07 11 0 0 11 11 11 23 23 23 34.05 1.24 98.64 0 2 3 Whitelist STAD-US 0.68 0.2 0 0 0.64 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 4 0 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 4 21805024 36771159 4 4 507 0 0 2 2 0 0.26 0.15 4 0 0 4 4 4 27 16 16 34.05 25.74 74.04 0 3 4 Whitelist STAD-US 0.62 0.36 0 0 0.59 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 8 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 5 8959766 170482310 1 20 507 2 7 1 0 10 0.01 0.31 11 0 0 11 5 11 13 5 5 34.05 39.76 60.08 0 2 1 Whitelist STAD-US 1_10 0.68 0.57 0 0 0.19 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 30 0.03 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 6 2029950 166153467 1 14 507 1 9 0 0 4 0 0.45 15 0 0 15 10 15 18 13 13 34.05 57.83 42.02 1 2 3 Whitelist STAD-US X 0.01 0.7 0 0 0.01 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 24 0.02 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 7 86655436 99825258 5 5 507 0 1 3 1 0 0.28 0.01 10 0 0 10 7 9 32 12 12 34.05 38.77 61.15 0 1 2 Whitelist STAD-US 0.62 0.05 0 0 0.59 1 Linked to high confidence STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA Canonical without polyploidization 10 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 8 28796007 70225556 3 4 507 2 0 0 1 1 0.3 0.48 4 0 0 4 4 4 17 4 7 34.05 71.58 27.97 0 2 3 Whitelist STAD-US 0.68 0.72 0 0 0.59 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 7 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 9 3506571 139604450 1 9 507 1 8 0 0 0 0 0.3 18 0 0 18 7 18 18 7 7 34.05 17.92 81.91 0 2 3 Whitelist STAD-US 0.02 0.55 0 0 0.02 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 18 0.02 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 10 11402646 130077522 1 26 507 2 6 2 2 14 0.26 0.17 26 0 0 26 9 21 26 9 9 34.05 20.17 79.66 0 2 3 Whitelist STAD-US 1_17_4_5_7_X 0.68 0.38 0 0 0.59 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 38 0.04 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 11 13332708 120326699 1 14 507 0 7 1 0 6 0 0.53 20 0 0 20 8 9 20 8 9 34.05 60.9 38.55 0 2 1 Whitelist STAD-US 15 0.21 0.76 0 0 0.04 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 22 0.02 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 12 6862817 118814429 1 12 507 0 2 0 0 10 0.11 0.25 5 0 0 5 4 5 6 4 4 34.05 61.55 38.37 0 1 2 Whitelist STAD-US 11_13_5 0.93 0.49 0 0 0.48 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 14 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 13 88602574 107699114 5 14 507 1 0 1 3 9 0.28 0 19 0 0 19 5 11 45 9 10 34.05 47.47 52.53 1 3 2 Whitelist STAD-US 20_X 0.62 0 0 0 0.59 1 Linked to high confidence STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA With other complex events 19 0.02 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 14 71036407 78206873 2 4 507 0 4 0 0 0 0.01 0 6 0 0 6 4 6 24 10 10 34.05 15.02 84.07 0 3 2 Whitelist STAD-US 0.21 0.02 0 0 0.16 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 8 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 15 30184284 91364444 1 8 507 0 6 0 0 2 0 0.41 11 0 0 11 11 11 11 11 11 34.05 1.11 98.79 0 2 3 Whitelist STAD-US 11 0.06 0.66 0 0 0.03 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 14 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 16 4547436 83204030 1 6 507 0 3 1 0 2 0.11 0.27 6 0 0 6 4 6 7 4 4 34.05 16.72 83.18 0 2 1 Whitelist STAD-US 6 0.54 0.51 0 0 0.48 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 10 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 17 17470449 77164988 1 24 507 1 12 0 1 10 0 0 19 0 0 19 12 12 20 12 12 34.05 48.93 51.07 0 2 3 Whitelist STAD-US 1_10_4 0.12 0 0 0 0 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 38 0.04 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 18 3353441 77470669 1 22 507 0 6 0 0 16 0 0 5 0 0 5 5 5 6 6 6 34.05 1 98.18 0 3 2 Whitelist STAD-US 1_13_4 0.54 0.02 0 0 0.03 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 28 0.03 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 19 2019819 51252765 1 9 507 1 3 2 0 3 0.34 0.33 11 0 0 11 7 11 12 8 8 34.05 44.06 55.76 0 2 1 Whitelist STAD-US 1 0.85 0.59 0 0 0.59 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 15 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 20 42226186 62284371 10 18 507 1 4 3 2 8 0.57 0 40 0 0 40 9 9 56 10 10 34.05 35.57 63.77 0 7 6 Whitelist STAD-US 7 0.87 0 0 0 0.64 1 High confidence STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA With other complex events 28 0.03 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 21 27359130 45570825 1 7 507 0 3 0 0 4 0.03 0.68 2 0 0 NA NA NA NA NA NA 34.05 0.39 76.96 0 2 3 Whitelist STAD-US 0.62 0.88 0 0 0.33 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 10 0.01 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 22 45275851 45528592 1 1 507 0 1 0 0 0 0.39 0.41 2 0 NA NA NA NA 9 5 5 34.05 81.89 18.11 0 3 4 Whitelist STAD-US 0.62 0.65 0 NA 0.59 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 2 0 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8cb0144b-be6b-40a1-86a2-708f96d9b615 X 9737541 134063296 1 12 507 1 4 0 0 7 0.04 0.08 11 0 0 11 11 11 13 13 13 34.05 91.61 7.99 0 1 2 Whitelist STAD-US 13_3_6 0.41 0.24 0 0 0.36 1 No STAD-US 8cb0144b-be6b-40a1-86a2-708f96d9b615 STAD 0.88 1.89 Stomach-AdenoCA NA 17 0.02 NA 1 STAD-US DO38779 TCGA-CG-4443 8cb0144b-be6b-40a1-86a2-708f96d9b615 male alive C16.2 68 NA 912 NA Included Stomach-AdenoCA STAD US 0 30 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 1 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 2 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 3 61060176 105446927 1 3 42 2 1 0 0 0 0.3 1 2 0 0 NA NA NA NA NA NA 19.35 99.88 0 0 3 5 Whitelist STAD-US 0.62 1 0 0 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 6 0.07 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 4 101028936 114282972 1 2 42 0 0 0 1 1 0.39 0.36 3 0 NA NA NA NA 5 5 5 19.35 0.08 99.91 2 2 1 Whitelist STAD-US 0.68 0.62 0 NA 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 3 0.04 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 5 NA NA 0 0 42 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.76 NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 6 NA NA 0 0 42 0 0 0 0 0 NA 0.74 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.91 NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 7 20633352 142367849 1 10 42 2 0 1 0 7 0.3 0 1 0 0 NA NA NA NA NA NA 19.35 0 99.78 0 2 NA Whitelist STAD-US 18 0.62 0 0 0 0.59 1 Linked to high confidence STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA With other complex events 13 0.15 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 8 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 9 21189560 23157547 2 2 42 0 0 1 1 0 0.57 0.23 3 0 0 NA NA NA 5 3 5 19.35 2.1 97.2 2 2 0 Whitelist STAD-US 0.68 0.46 0 0 0.64 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 4 0.05 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 10 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 11 8840720 8854029 1 1 42 0 0 1 0 0 0.39 0 1 0.03 0 NA NA NA NA NA NA 19.35 8.66 90.91 0 2 NA Whitelist STAD-US 0.62 0.02 0.03 0 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 2 0.02 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 12 32733732 32812190 1 1 42 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 19.35 0.06 95.83 0 2 3 Whitelist STAD-US 0.62 0.9 NA NA 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 2 0.02 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 13 100291374 108707025 1 3 42 0 0 0 1 2 0.39 0.06 1 0 0 NA NA NA NA NA NA 19.35 0 99.13 13 2 NA Whitelist STAD-US 0.62 0.18 0 0 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 4 0.05 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 14 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 15 NA NA 0 0 42 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 16 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 17 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 18 25148058 76030080 5 7 42 1 2 1 1 2 0.9 0 9 0 0 9 7 9 10 7 7 19.35 74.22 25.74 0 2 1 Whitelist STAD-US 0.96 0 0 0 0.92 1 High confidence STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA Canonical without polyploidization 12 0.14 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 19 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 20 14987713 15125106 1 1 42 1 0 0 0 0 0.39 0.6 2 NA NA NA NA NA NA NA NA 19.35 98.78 0.22 0 2 3 Whitelist STAD-US 0.62 0.81 NA NA 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 2 0.02 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 21 NA NA 0 0 42 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.65 NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae 22 NA NA 0 0 42 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae X 87068808 87091774 1 1 42 0 1 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 19.35 100 0 0 1 NA Whitelist STAD-US 0.62 0.9 NA NA 0.59 1 No STAD-US 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae STAD 0.69 1.97 Stomach-AdenoCA NA 2 0.02 NA 2 STAD-US DO38388 TCGA-BR-7722 8d3e3d09-bc61-4d5e-b8d6-5aee6cb488ae male alive C16.0 62 NA 5 NA Included Stomach-AdenoCA STAD US 0 0.16 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 1 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 2 9478976 62722413 1 2 32 2 0 0 0 0 0.11 0.75 4 0.16 0 4 4 4 5 5 5 9.67 0.06 99.84 0 1 2 Whitelist STAD-US 0.54 0.92 0.17 0 0.48 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 3 4573292 97909293 1 4 32 3 1 0 0 0 0.11 0.07 8 0 0 8 7 8 9 7 7 9.67 0.24 99.58 1 2 1 Whitelist STAD-US 0.54 0.21 0 0 0.48 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 8 0.12 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 4 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 5 58432711 107276548 1 2 32 1 1 0 0 0 0.57 1 2 NA 0 NA NA NA NA NA NA 9.67 0.04 99.83 0 1 2 Whitelist STAD-US 0.68 1 NA 0 0.64 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 6 95527556 101996370 1 2 32 1 0 1 0 0 0.57 0.12 1 0 0 NA NA NA NA NA NA 9.67 0 99.85 0 2 NA Whitelist STAD-US 0.68 0.31 0 0 0.64 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 7 64935196 64945605 1 1 32 0 0 1 0 0 0.39 0.69 1 NA NA NA NA NA NA NA NA 9.67 0 99.77 0 2 NA Whitelist STAD-US 0.62 0.89 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 8 99448965 99700530 1 1 32 0 0 0 1 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.67 99.99 0 0 3 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 9 101854232 112093045 2 2 32 1 1 0 0 0 0.57 0.04 1 0 0 NA NA NA NA NA NA 9.67 0.09 99.2 0 2 NA Whitelist STAD-US 0.68 0.13 0 0 0.64 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 10 96720558 96935078 1 1 32 0 0 0 1 0 0.39 0.66 1 NA NA NA NA NA NA NA NA 9.67 0 99.82 0 2 NA Whitelist STAD-US 0.62 0.87 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 11 40909026 41626166 1 1 32 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 9.67 0.53 99.04 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 12 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 13 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 14 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 15 NA NA 0 0 32 0 0 0 0 0 NA 0.59 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.81 NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 16 78557263 78982610 1 3 32 3 0 0 0 0 0.03 0.01 6 0 0 6 6 6 7 7 7 9.67 0.21 99.68 0 1 2 Whitelist STAD-US 0.41 0.05 0 0 0.33 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 6 0.09 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 17 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 18 55601797 55613847 1 1 32 0 1 0 0 0 0.39 0.58 2 NA NA NA NA NA NA NA NA 9.67 0.02 99.95 1 2 3 Whitelist STAD-US 0.62 0.8 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 19 39737805 39756405 1 1 32 0 0 1 0 0 0.39 0.47 1 NA NA NA NA NA NA NA NA 9.67 0 99.83 0 2 NA Whitelist STAD-US 0.62 0.71 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 20 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 21 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 22 NA NA 0 0 32 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::8fccff71-3710-4cb9-b8af-61707aebe5d8 X 134740883 134812415 1 1 32 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 9.67 100 0 0 1 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US 8fccff71-3710-4cb9-b8af-61707aebe5d8 STAD 0.75 1.99 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38380 TCGA-CG-4442 8fccff71-3710-4cb9-b8af-61707aebe5d8 male alive C16.3 85 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 1 10474765 243482518 1 12 110 4 0 1 1 6 0.11 0.07 18 0 0 18 6 7 20 6 9 61.3 98.84 1.15 0 3 4 Whitelist STAD-US 0.68 0.21 0 0 0.48 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 18 0.08 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 2 103037001 103292114 1 1 110 0 1 0 0 0 0.39 0.03 2 NA NA NA NA NA 5 3 3 61.3 99.9 0 0 3 5 Whitelist STAD-US 0.62 0.1 NA NA 0.59 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 3 60453158 60637963 1 2 110 1 1 0 0 0 0.57 0.45 4 0 0 4 3 4 8 4 6 61.3 30.27 69.62 0 2 0 Whitelist STAD-US 0.68 0.7 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 4 45825910 46495826 1 1 110 0 0 0 1 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 61.3 75.68 24.3 0 2 3 Whitelist STAD-US 0.62 0.03 NA NA 0.59 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 5 NA NA 0 0 110 0 0 0 0 0 NA 0.17 NA 0.01 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.38 0.01 NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 6 42708287 162812595 1 3 110 1 1 0 0 1 0.57 0.69 3 0 0 NA NA NA 5 3 3 61.3 99.86 0 0 4 5 Whitelist STAD-US 0.62 0.89 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 7 10854405 93427187 1 2 110 0 0 1 1 0 0.57 1 7 0 0 7 4 6 12 5 5 61.3 26.7 73.07 0 3 2 Whitelist STAD-US 0.68 1 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 8 2540027 12232407 41 45 110 13 9 11 8 4 0.7 0 31 0 0 31 3 4 37 4 4 61.3 96.46 0 5 4 49 Whitelist STAD-US 0.68 0 0 0 0.77 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 86 0.39 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 9 9323401 9427882 1 1 110 1 0 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 61.3 0.07 99.25 0 1 2 Whitelist STAD-US 0.62 0.33 NA NA 0.59 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 10 56631466 65049299 1 5 110 1 1 0 0 3 0.57 0.17 2 0 0 NA NA NA 6 3 4 61.3 82 17.83 0 4 5 Whitelist STAD-US 0.93 0.38 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 11 97783882 97943393 1 1 110 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA 5 3 3 61.3 99.57 0 0 3 4 Whitelist STAD-US 0.62 0.74 NA NA 0.59 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 12 132265344 132348577 2 2 110 0 1 0 1 0 0.57 0 4 0 0 4 3 4 13 3 5 61.3 79.91 19.92 0 2 3 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 13 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 14 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 15 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 16 NA NA 0 0 110 0 0 0 0 0 NA 0.08 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.22 0 NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 17 14733813 19224656 2 2 110 0 0 1 1 0 0.57 0.01 6 0 0 6 3 5 6 3 5 61.3 99.98 0 1 3 4 Whitelist STAD-US 0.68 0.05 0 0 0.64 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 18 NA NA 0 0 110 0 0 0 0 0 NA 0.38 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.63 NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 19 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 20 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 21 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 22 NA NA 0 0 110 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::956017ba-5e4b-42c7-b93d-42316874ba93 X 146251924 146416133 1 1 110 0 1 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 3 61.3 37.52 59.1 0 2 3 Whitelist STAD-US 0.62 0.15 NA NA 0.59 0 No STAD-US 956017ba-5e4b-42c7-b93d-42316874ba93 STAD 0.21 3.02 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578208_C_T,CN:3 3 STAD-US DO38791 TCGA-BR-4255 956017ba-5e4b-42c7-b93d-42316874ba93 female alive C16.9 76 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 1 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 2 18367285 240397168 1 4 29 4 0 0 0 0 0.01 0.3 6 0 0 6 6 6 7 7 7 25.71 0.78 99.14 0 1 2 Whitelist STAD-US 0.21 0.55 0 0 0.16 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 8 0.14 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 3 931341 178546466 1 7 29 7 0 0 0 0 0 0 14 0 0 14 7 14 15 8 8 25.71 1.53 98.33 3 1 2 Whitelist STAD-US 0.02 0.02 0 0 0.01 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 14 0.24 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 4 174680045 174836079 1 1 29 1 0 0 0 0 0.39 0.72 1 NA NA NA NA NA NA NA NA 25.71 0 99.99 0 2 NA Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 5 130295965 144760421 1 1 29 0 0 1 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.71 0 99.86 0 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 6 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 7 30873082 110667234 1 3 29 2 1 0 0 0 0.3 0.02 6 0 0 6 3 6 7 3 3 25.71 99.73 0.03 0 3 2 Whitelist STAD-US 0.62 0.07 0 0 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 6 0.1 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 8 75146686 75328290 1 1 29 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 25.71 99.99 0 0 3 4 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 9 10400803 33031927 1 2 29 2 0 0 0 0 0.11 0.31 3 NA 0 NA NA NA NA NA NA 25.71 0.01 99.31 0 2 1 Whitelist STAD-US 0.54 0.57 NA 0 0.48 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 10 89569707 89746401 1 1 29 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 25.71 0 99.83 0 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 11 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 12 82948398 82996077 1 1 29 0 1 0 0 0 0.39 0.4 1 NA NA NA NA NA NA NA NA 25.71 60.17 39.75 0 3 NA Whitelist STAD-US 0.62 0.64 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 13 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 14 103293915 103693914 1 1 29 1 0 0 0 0 0.39 0.23 2 NA NA NA NA NA 5 3 3 25.71 42 58 0 0 1 Whitelist STAD-US 0.62 0.47 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 15 NA NA 0 0 29 0 0 0 0 0 NA 0.56 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.78 NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 16 78437454 78489532 2 2 29 1 1 0 0 0 0.57 0.18 1 NA 0 NA NA NA NA NA NA 25.71 0 99.89 0 2 NA Whitelist STAD-US 0.68 0.4 NA 0 0.64 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 4 0.07 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 17 72325055 72372475 1 1 29 0 1 0 0 0 0.39 0.55 1 NA NA NA NA NA NA NA NA 25.71 0 99.98 0 2 NA Whitelist STAD-US 0.62 0.78 NA NA 0.59 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 2 0.03 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 18 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 19 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 20 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 21 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de 22 NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::aef8d98f-7a1c-47f3-b5a7-a3cb299c70de X NA NA 0 0 29 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US aef8d98f-7a1c-47f3-b5a7-a3cb299c70de STAD 0.38 2.15 Stomach-AdenoCA NA 0 0 NA 3 STAD-US DO47817 TCGA-BR-8381 aef8d98f-7a1c-47f3-b5a7-a3cb299c70de male alive C16.1 51 NA 8 NA Included Stomach-AdenoCA STAD US 0 0.26 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 1 152754187 218278379 1 3 26 0 1 0 1 1 0.57 0.45 6 NA 0 6 3 4 8 3 4 31.46 34.65 65.35 0 1 3 Whitelist STAD-US 0.87 0.7 NA 0 0.64 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 5 0.1 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 2 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 3 105424796 105454423 1 1 26 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 31.46 0 99.97 0 2 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 4 19648148 28424454 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.46 4.59 95.39 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 5 58421051 58746980 1 1 26 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.46 0.18 99.66 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 6 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 7 93061292 100175329 9 10 26 3 2 3 1 1 0.75 0 14 0 0 14 3 4 22 4 4 31.46 49.94 49.84 0 9 10 Whitelist STAD-US 0.68 0 0 0 0.83 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 19 0.37 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 9 37479527 91143714 1 1 26 1 0 0 0 0 0.39 1 3 NA NA NA NA NA 5 4 4 31.46 63.16 33.73 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 11 40295980 74558523 1 2 26 2 0 0 0 0 0.11 0.12 5 NA 0 5 3 4 9 5 6 31.46 80.27 19.29 0 1 2 Whitelist STAD-US 0.54 0.3 NA 0 0.48 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 4 0.08 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 12 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 13 NA NA 0 0 26 0 0 0 0 0 NA 0.6 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.81 NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 15 91636696 91713003 1 1 26 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 31.46 0.07 99.93 0 2 3 Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 17 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 18 19562695 36084079 1 2 26 0 1 1 0 0 0.57 0.03 6 0 0 6 0 3 7 0 0 31.46 94.63 0 0 1 5 Whitelist STAD-US 0.68 0.12 0 0 0.64 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 4 0.08 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 21 20483359 20726036 1 1 26 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 31.46 58.86 11.2 0 2 NA Whitelist STAD-US 0.62 0.52 NA NA 0.59 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::af1086cc-b330-4ad6-ae1c-3b5c7259949a X NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US af1086cc-b330-4ad6-ae1c-3b5c7259949a STAD 0.22 1.88 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38229 TCGA-BR-6564 af1086cc-b330-4ad6-ae1c-3b5c7259949a female alive C16.2 46 NA 25 NA Included Stomach-AdenoCA STAD US 0 0.82 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 1 98109351 174166921 1 3 79 2 1 0 0 0 0.3 1 4 0 0 4 4 4 9 5 7 91.48 97.02 0 0 3 4 Whitelist STAD-US 0.62 1 0 0 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 6 0.04 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 2 130581045 131026828 1 1 79 1 0 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 91.48 99.72 0.18 0 2 3 Whitelist STAD-US 0.62 0.06 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 3 60074911 60712452 2 2 79 2 0 0 0 0 0.11 0.27 8 0 0 8 6 7 15 6 7 91.48 99.82 0.04 0 0 2 Whitelist STAD-US 0.54 0.51 0 0 0.48 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 4 0.03 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 4 127336415 127767709 1 1 79 1 0 0 0 0 0.39 0.18 2 NA NA NA NA NA NA NA NA 91.48 99.78 0 0 1 3 Whitelist STAD-US 0.62 0.39 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 5 133705944 145542485 1 1 79 1 0 0 0 0 0.39 0.06 2 NA NA NA NA NA NA NA NA 91.48 93.33 6.54 0 2 3 Whitelist STAD-US 0.62 0.19 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 6 162268790 162524821 1 1 79 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA NA NA NA 91.48 99.86 0 0 3 4 Whitelist STAD-US 0.62 0.25 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 7 110602633 157269388 1 4 79 3 1 0 0 0 0.11 0.07 6 0 0 6 3 5 6 3 3 91.48 99.77 0 0 4 3 Whitelist STAD-US 0.54 0.22 0 0 0.48 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 8 0.05 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 8 14842015 139820217 1 2 79 1 0 1 0 0 0.57 0.44 1 NA 0 NA NA NA NA NA NA 91.48 99.99 0 0 3 NA Whitelist STAD-US 0.68 0.69 NA 0 0.64 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 4 0.03 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 9 3210824 5514822 13 26 79 6 7 7 6 0 0.98 0 32 0 0 32 3 3 38 3 5 91.48 94.65 2.24 0 19 3 Whitelist STAD-US 1 0 0 0 0.99 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 52 0.33 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 10 77347398 129671264 1 3 79 1 1 0 0 1 0.57 0.79 1 0 0 NA NA NA NA NA NA 91.48 96.65 0 0 3 NA Whitelist STAD-US 0.62 0.94 0 0 0.64 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 5 0.03 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 11 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 12 41794723 70724858 1 4 79 0 2 1 1 0 0.57 0.1 7 0 0 7 3 4 8 3 3 91.48 99.92 0 1 4 8 Whitelist STAD-US 0.68 0.27 0 0 0.64 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 8 0.05 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 13 76184711 76434716 1 1 79 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 8 3 5 91.48 97 0.22 0 2 3 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 14 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 15 NA NA 0 0 79 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.9 NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 16 78512717 78777026 3 3 79 3 0 0 0 0 0.03 0.06 6 0 0 6 3 6 12 4 4 91.48 95.56 0 0 1 3 Whitelist STAD-US 0.41 0.19 0 0 0.33 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 6 0.04 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 17 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 18 41217295 44174268 1 1 79 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 91.48 3.79 96.18 0 2 3 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 19 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 20 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 21 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 22 NA NA 0 0 79 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 0 0 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b2e2d35c-7a79-4165-97a5-82d5c37d94f2 X 7614205 7832852 1 1 79 1 0 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 91.48 100 0 0 1 NA Whitelist STAD-US 0.62 0.41 NA NA 0.59 0 No STAD-US b2e2d35c-7a79-4165-97a5-82d5c37d94f2 STAD 0.17 3.37 Stomach-AdenoCA NA 2 0.01 NA 8 STAD-US DO38190 TCGA-FP-7998 b2e2d35c-7a79-4165-97a5-82d5c37d94f2 male alive C16.2 77 NA 109 NA Included Stomach-AdenoCA STAD US 0 3.59 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 1 86667308 87922078 2 2 298 0 0 1 1 0 0.57 0.02 4 0 0 4 4 4 11 6 6 64.27 83.59 16.4 0 2 3 Whitelist STAD-US 0.68 0.09 0 0 0.64 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 4 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 2 50818402 169808536 2 4 298 0 0 2 2 0 0.26 0.06 16 0 0 16 8 16 26 8 8 64.27 97.08 0.23 0 4 3 Whitelist STAD-US 0.62 0.19 0 0 0.59 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 8 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 3 43475901 127775793 1 5 298 1 4 0 0 0 0.04 0 8 0 0 8 5 7 9 5 7 64.27 0.37 99.48 0 2 5 Whitelist STAD-US 0.45 0 0 0 0.36 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 10 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 4 4225342 152658540 1 8 298 1 7 0 0 0 0 0.04 16 0 0 16 5 13 20 5 14 64.27 18.45 79.17 0 2 3 Whitelist STAD-US 0.06 0.13 0 0 0.04 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 16 0.03 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 5 42423989 152631638 1 5 298 1 3 0 0 1 0.11 0.01 12 0 0 12 6 6 13 6 6 64.27 59.29 40.57 0 2 3 Whitelist STAD-US 0.62 0.04 0 0 0.48 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 9 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 6 39514580 170510916 56 66 298 17 16 10 13 10 0.54 0 80 0 0 80 7 13 83 7 11 64.27 38.32 58.64 0 5 4 Whitelist STAD-US 9 0.85 0 0 0 0.64 1 High confidence STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA With other complex events 122 0.2 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 7 25279771 28095993 13 13 298 3 2 4 4 0 0.84 0.05 14 0 0 14 5 11 25 5 14 64.27 96.29 1.16 2 4 2 Whitelist STAD-US 0.9 0.17 0 0 0.88 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 26 0.04 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 8 95527220 98787481 1 3 298 0 1 0 1 1 0.57 0 3 NA 0 NA NA NA 5 3 3 64.27 96.58 0 0 5 6 Whitelist STAD-US 0.87 0 NA 0 0.64 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 5 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 9 74822475 138742366 6 8 298 3 1 1 1 2 0.57 0.04 10 0 0 10 10 10 15 10 13 64.27 61.86 35.03 0 2 3 Whitelist STAD-US 6 0.87 0.13 0 0 0.64 1 High confidence STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA Canonical without polyploidization 14 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 10 3093791 130459630 1 12 298 2 7 0 1 2 0.01 0.68 14 0 0 14 5 6 15 5 7 64.27 10.62 86.03 4 2 4 Whitelist STAD-US 0.21 0.88 0 0 0.19 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 22 0.04 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 11 7823530 127842986 1 6 298 0 3 0 1 2 0.11 0.22 6 0 0 6 3 4 8 3 5 64.27 38.03 57.79 0 2 3 Whitelist STAD-US 0.54 0.44 0 0 0.48 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 10 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 12 6390793 120466862 1 13 298 1 2 1 0 9 0.57 0.41 10 0 0 10 3 7 14 3 4 64.27 93.71 1.9 0 3 4 Whitelist STAD-US 6 0.9 0.66 0 0 0.64 1 Linked to high confidence STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA With other complex events 17 0.03 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 13 58018269 58942911 2 4 298 1 0 2 1 0 0.57 0.42 4 0 0 4 0 3 9 5 5 64.27 48.4 48.82 0 1 2 Whitelist STAD-US 0.68 0.67 0 0 0.64 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 8 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 14 24923256 100767511 1 7 298 1 6 0 0 0 0 0.87 13 0 0 13 9 12 14 9 12 64.27 99.09 0 0 3 5 Whitelist STAD-US 0.13 1 0 0 0.09 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 14 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 15 68175443 68418605 1 1 298 1 0 0 0 0 0.39 0.37 1 0 NA NA NA NA NA NA NA 64.27 100 0 0 3 NA Whitelist STAD-US 0.62 0.62 0 NA 0.59 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 2 0 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 16 47809344 48293233 3 3 298 1 1 0 1 0 0.8 0.04 3 0 0 NA NA NA 17 4 6 64.27 88.46 11.18 0 7 8 Whitelist STAD-US 0.87 0.15 0 0 0.84 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 6 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 17 36948824 37894267 2 3 298 0 0 1 1 1 0.57 0.72 6 0 0 6 3 4 12 4 4 64.27 99.98 0 0 7 1 Whitelist STAD-US 0.87 0.9 0 0 0.64 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 5 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 18 NA NA 0 0 298 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 19 22985925 23057435 1 1 298 0 1 0 0 0 0.39 0.67 2 0 NA NA NA NA 6 3 3 64.27 99.71 0.12 0 2 3 Whitelist STAD-US 0.62 0.88 0 NA 0.59 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 2 0 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 20 44129017 62859821 2 6 298 0 1 1 2 2 0.57 0 8 0 0 8 3 4 17 4 4 64.27 87.54 6.12 4 6 1 Whitelist STAD-US 1 0.68 0 0 0 0.64 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 10 0.02 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 21 10418428 19331597 2 2 298 0 2 0 0 0 0.11 0.42 3 0 0 NA NA NA 7 4 5 64.27 54.5 15.45 0 2 4 Whitelist STAD-US 0.54 0.67 0 0 0.48 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 4 0.01 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 22 NA NA 0 0 298 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 0 0 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 X 21392529 22286670 8 8 298 3 1 2 2 0 0.8 0 8 0 0 8 3 4 26 6 6 64.27 96.42 0 0 5 3 Whitelist STAD-US 0.87 0.02 0 0 0.84 1 No STAD-US b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 STAD 0.49 3.06 Stomach-AdenoCA NA 16 0.03 frameshift_insertion,17_7579395_C_-,CN:3 3 STAD-US DO47863 TCGA-BR-8486 b8a1c8c7-3945-4d84-8f58-3a1a1eb10730 female alive C16.1 90 NA 30 NA Included Stomach-AdenoCA STAD US 0 0.99 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 1 118966740 119037337 1 1 28 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA 4 3 4 8.87 0.03 97 0 2 3 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 2 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 3 159970844 175183913 1 2 28 1 1 0 0 0 0.57 0.13 3 0 0 NA NA NA NA NA NA 8.87 0.04 99.91 0 2 3 Whitelist STAD-US 0.68 0.32 0 0 0.64 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 4 73889436 181316128 1 2 28 0 1 0 1 0 0.57 0.11 3 0 0 NA NA NA NA NA NA 8.87 0.07 99.9 0 2 1 Whitelist STAD-US 0.68 0.29 0 0 0.64 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 5 NA NA 0 0 28 0 0 0 0 0 NA 0.26 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.5 0 NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 6 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 7 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 8 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 9 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 10 NA NA 0 0 28 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 11 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 12 130402695 130419711 1 1 28 1 0 0 0 0 0.39 0.04 2 0 NA NA NA NA NA NA NA 8.87 0.01 99.91 0 2 3 Whitelist STAD-US 0.62 0.14 0 NA 0.59 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 13 87712646 87725719 1 1 28 1 0 0 0 0 0.39 0.63 1 NA NA NA NA NA NA NA NA 8.87 0 100 0 2 NA Whitelist STAD-US 0.62 0.84 NA NA 0.59 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 14 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 15 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 16 78460273 78564175 1 1 28 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 8.87 0.11 99.87 0 1 2 Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 17 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 18 25179586 26571232 2 2 28 0 0 1 1 0 0.57 0 2 0 0 NA NA NA 9 8 8 8.87 74.44 25.52 0 1 2 Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 4 0.07 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 19 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 20 NA NA 0 0 28 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.7 NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 21 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa 22 NA NA 0 0 28 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c6316fb5-99a7-4adf-832f-dce44ddcd3aa X 73349228 76591877 1 1 28 0 1 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 8.87 97.91 2.09 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US c6316fb5-99a7-4adf-832f-dce44ddcd3aa STAD 0.39 1.94 Stomach-AdenoCA NA 2 0.04 NA 2 STAD-US DO47841 TCGA-HU-8608 c6316fb5-99a7-4adf-832f-dce44ddcd3aa male alive C16.2 70 NA 323 NA Included Stomach-AdenoCA STAD US 0 10.62 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 1 26803372 28284878 1 1 187 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 3 68.74 99.41 0.59 0 2 3 Whitelist STAD-US 0.62 0 NA NA 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 2 NA NA 0 0 187 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0 NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 3 59878320 60291053 1 1 187 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 4 3 3 68.74 52.79 44.13 0 0 2 Whitelist STAD-US 0.62 0.06 0 NA 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 4 133771749 177241253 1 2 187 1 0 0 1 0 0.57 0.06 2 0 0 NA NA NA 5 3 4 68.74 4.57 92.85 0 1 2 Whitelist STAD-US 0.68 0.18 0 0 0.64 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 5 59288466 59300446 1 1 187 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 68.74 99.88 0 0 3 NA Whitelist STAD-US 0.62 0 NA NA 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 6 162754034 162844013 1 1 187 1 0 0 0 0 0.39 0.06 2 0 NA NA NA NA 7 3 3 68.74 97.11 0.05 0 2 3 Whitelist STAD-US 0.62 0.19 0 NA 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 7 50236598 98982481 1 8 187 1 2 1 0 4 0.57 0.19 10 0 0 10 3 5 13 3 3 68.74 99.78 0 0 8 4 Whitelist STAD-US 8 0.87 0.41 0 0 0.64 0 Linked to low confidence STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA With other complex events 12 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 8 18453850 78826170 43 51 187 11 13 10 9 8 0.85 0 79 0 0 79 5 8 79 5 8 68.74 83.68 12.9 1 3 8 Whitelist STAD-US 0.87 0 0 0 0.89 0 Low confidence STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA With other complex events 94 0.25 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 9 NA NA 0 0 187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 10 13130549 73406460 1 4 187 2 0 0 1 1 0.3 1 6 0 0 6 4 4 10 4 4 68.74 91.58 5.01 0 5 7 Whitelist STAD-US 0.68 1 0 0 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 11 33783347 70901159 6 7 187 0 3 2 1 1 0.34 0.02 6 0 0 6 0 4 10 3 3 68.74 2.29 97.28 0 2 3 Whitelist STAD-US 0.62 0.09 0 0 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 12 NA NA 0 0 187 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.3 NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 13 NA NA 0 0 187 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.09 NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 14 59049270 101362712 4 5 187 1 1 1 1 1 1 0 7 0 0 7 4 7 13 5 5 68.74 99.09 0 0 3 4 Whitelist STAD-US 0.93 0 0 0 1 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 15 NA NA 0 0 187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 16 60581319 61230216 2 2 187 0 0 1 1 0 0.57 0.5 1 0 0 NA NA NA 4 3 3 68.74 95.48 0 0 3 NA Whitelist STAD-US 0.68 0.74 0 0 0.64 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 17 25815792 62916421 35 40 187 4 7 16 8 5 0.03 0 70 0 0 70 5 9 71 5 9 68.74 43.33 52.19 0 8 49 Whitelist STAD-US 0.54 0 0 0 0.33 0 Low confidence STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA With other complex events 75 0.2 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 18 25500898 32945234 4 4 187 1 0 2 1 0 0.57 0.82 3 0 0 NA NA NA 4 4 4 68.74 36.12 63.82 0 2 5 Whitelist STAD-US 0.68 0.96 0 0 0.64 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 19 2746768 5299734 1 1 187 1 0 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 68.74 95.51 4.32 0 2 3 Whitelist STAD-US 0.62 0.81 NA NA 0.59 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 20 14944358 62391076 1 2 187 2 0 0 0 0 0.11 0.45 5 NA 0 5 4 5 7 4 4 68.74 98.75 0.27 0 3 4 Whitelist STAD-US 0.54 0.69 NA 0 0.48 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 21 NA NA 0 0 187 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 22 NA NA 0 0 187 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::c991697f-77f9-412a-9bd1-0e47f7387cb2 X 11201140 41766909 1 2 187 1 0 0 1 0 0.57 0.09 3 0 0 NA NA NA NA NA NA 68.74 0.02 99.98 0 2 3 Whitelist STAD-US 0.68 0.25 0 0 0.64 0 No STAD-US c991697f-77f9-412a-9bd1-0e47f7387cb2 STAD 0.56 3.09 Stomach-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 4 STAD-US DO38775 TCGA-CD-5799 c991697f-77f9-412a-9bd1-0e47f7387cb2 male alive C16.3 45 NA 21 NA Included Stomach-AdenoCA STAD US 0 0.69 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 1 59833557 118334698 32 49 1322 6 11 5 10 17 0.35 0 47 0 0 47 3 6 138 11 11 92.23 96.65 0.34 11 4 8 Whitelist STAD-US 0.71 0 0 0 0.59 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 81 0.03 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 2 72710938 179446562 6 20 1322 1 1 2 2 14 0.88 0.05 58 0 0 58 5 7 101 7 17 92.23 97.31 0 17 5 6 Whitelist STAD-US 3 0.68 0.16 0 0 0.91 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 26 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 3 12028186 62799589 118 298 1322 32 27 35 24 180 0.48 0 269 0 0 269 5 12 342 7 12 92.23 99.3 0.21 12 5 6 Whitelist STAD-US 2 0.97 0 0 0 0.64 0 Linked to low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA With other complex events 416 0.16 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 4 101648717 156904507 13 17 1322 4 4 2 3 4 0.84 0.02 27 0 0 27 5 9 80 6 9 92.23 97.25 0.29 1 3 5 Whitelist STAD-US 13 0.62 0.09 0 0 0.88 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 30 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 5 94993806 173860097 29 98 1322 6 7 11 5 69 0.41 0 94 0 0 94 4 5 161 4 6 92.23 72.1 25.23 5 4 2 Whitelist STAD-US 17_3 0.54 0 0 0 0.62 0 Low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA With other complex events 127 0.05 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 6 64442061 96377194 6 6 1322 1 3 1 1 0 0.57 0 8 0 0 8 5 8 45 6 17 92.23 90.61 6.56 0 4 6 Whitelist STAD-US 0.68 0 0 0 0.64 0 Low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA Before polyploidization 12 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 7 75111917 159113377 14 84 1322 5 2 4 3 70 0.7 0 71 0 0 71 6 6 98 6 6 92.23 99.95 0 4 5 6 Whitelist STAD-US 3 0.88 0 0 0 0.78 0 Low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA With other complex events 98 0.04 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 8 24773879 85797782 2 7 1322 0 0 1 1 5 0.57 0 13 0 0 13 11 13 31 13 13 92.23 96.48 0 0 6 8 Whitelist STAD-US 0.77 0 0 0 0.64 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 9 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 9 108508965 108850781 2 2 1322 1 1 0 0 0 0.57 0 1 0 0 NA NA NA 11 7 8 92.23 96.86 0.11 0 4 NA Whitelist STAD-US 0.68 0 0 0 0.64 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 4 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 10 48022639 67339711 3 3 1322 0 2 0 1 0 0.3 0.02 8 0 0 8 3 6 43 7 7 92.23 95.23 0.79 0 3 4 Whitelist STAD-US 0.62 0.07 0 0 0.59 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 6 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 11 5981579 123560469 1 37 1322 1 8 1 1 26 0 0.02 26 0 0 26 6 8 27 7 8 92.23 99.57 0 0 4 6 Whitelist STAD-US 17_4 0.77 0.07 0 0 0.13 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 48 0.02 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 12 22553729 22924400 3 3 1322 0 1 1 1 0 0.8 0 3 0 0 NA NA NA 27 6 8 92.23 99.98 0 0 5 7 Whitelist STAD-US 0.87 0 0 0 0.84 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 6 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 13 43528290 111869816 1 12 1322 3 6 0 0 3 0.01 0 17 0 0 17 7 12 20 7 12 92.23 100 0 5 6 7 Whitelist STAD-US 4 0.45 0 0 0 0.21 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 21 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 14 23478242 105206733 1 29 1322 0 12 0 1 16 0 0.1 30 0 0 30 11 16 35 12 16 92.23 99.09 0 1 6 4 Whitelist STAD-US 16_2_3 0.11 0.26 0 0 0 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 42 0.02 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 15 36025787 93562210 1 13 1322 2 4 0 0 7 0.06 0 15 0 0 15 9 10 20 10 12 92.23 93.08 2.14 0 3 5 Whitelist STAD-US 6 0.62 0 0 0 0.48 0 Linked to low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA After polyploidization 19 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 16 1181468 88223092 1 23 1322 4 7 1 0 11 0.02 0.17 36 0 0 36 7 8 36 7 8 92.23 95.48 0 0 5 3 Whitelist STAD-US 14 0.62 0.39 0 0 0.33 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 35 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 17 2599904 79841999 1 43 1322 2 9 1 0 31 0 0.13 23 0 0 23 11 13 24 11 13 92.23 95.11 0.45 0 6 8 Whitelist STAD-US 11 0.62 0.32 0 0 0.05 0 Linked to low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA With other complex events 55 0.02 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 18 21385883 67747406 4 12 1322 2 3 2 1 4 0.8 0 31 0 0 31 4 5 60 5 6 92.23 92.51 2.85 2 4 6 Whitelist STAD-US 0.62 0 0 0 0.84 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 20 0.01 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 19 16006717 23829529 11 99 1322 5 1 2 3 88 0.36 0 44 0 0 44 4 7 91 5 7 92.23 91.97 0 0 4 3 Whitelist STAD-US 17_3 0.97 0 0 0 0.59 0 Low confidence STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA With other complex events 110 0.04 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 20 51925862 53895390 18 149 1322 6 4 4 4 131 0.88 0 91 0 0 91 3 4 124 9 9 92.23 98.96 0.1 4 49 60 Whitelist STAD-US 3 0.68 0 0 0 0.91 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 167 0.06 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 21 19518138 43083133 1 7 1322 1 2 0 0 4 0.3 0.02 8 0 0 8 3 6 10 3 6 92.23 77.83 0 0 6 5 Whitelist STAD-US 0.62 0.09 0 0 0.59 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 10 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 22 29110491 29280549 3 3 1322 0 3 0 0 0 0.03 0 3 0 0 NA NA NA 7 3 4 92.23 100 0 0 4 6 Whitelist STAD-US 0.41 0.02 0 0 0.33 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 6 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::cb622cd6-776d-4681-8a67-4addd61c66b8 X 25435763 26134885 3 4 1322 1 0 1 1 1 0.8 0 3 0 0 NA NA NA 19 7 7 92.23 100 0 1 1 7 Whitelist STAD-US 0.68 0 0 0 0.84 0 No STAD-US cb622cd6-776d-4681-8a67-4addd61c66b8 STAD 0.46 4.99 Stomach-AdenoCA NA 7 0 frameshift_deletion,17_7579585_-_G,CN:4 7 STAD-US DO38635 TCGA-D7-6527 cb622cd6-776d-4681-8a67-4addd61c66b8 male alive C16.0 62 NA 126 NA Included Stomach-AdenoCA STAD US 0 4.14 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 1 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 2 187317145 187526085 1 2 38 2 0 0 0 0 0.11 0.77 4 NA 0 4 4 4 5 5 5 28.06 0.08 99.82 0 1 2 Whitelist STAD-US 0.54 0.93 NA 0 0.48 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 4 0.05 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 3 60338952 60401956 1 2 38 2 0 0 0 0 0.11 1 4 NA 0 4 4 4 5 5 5 28.06 0.02 99.84 0 1 2 Whitelist STAD-US 0.54 1 NA 0 0.48 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 4 0.05 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 4 91231041 91452115 1 1 38 0 1 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 28.06 0.12 99.87 0 2 3 Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 5 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 6 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 7 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 8 48803755 48818663 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 28.06 96.02 0 0 3 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 9 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 10 52829569 68748868 1 2 38 2 0 0 0 0 0.11 0.69 4 NA 0 4 4 4 5 5 5 28.06 99.27 0.56 0 2 3 Whitelist STAD-US 0.54 0.89 NA 0 0.48 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 4 0.05 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 11 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 12 46108614 103291938 1 2 38 2 0 0 0 0 0.11 0 4 0 0 4 4 4 9 5 5 28.06 10.78 89.14 0 1 2 Whitelist STAD-US 0.54 0.01 0 0 0.48 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 4 0.05 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 13 NA NA 0 0 38 0 0 0 0 0 NA 0.01 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.04 0 NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 14 44811658 75641343 1 1 38 1 0 0 0 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 28.06 0 96.29 0 2 NA Whitelist STAD-US 0.62 0.3 NA NA 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 15 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 16 78531215 78683215 1 1 38 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 28.06 0.17 99.72 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 17 74731267 80390575 1 1 38 0 1 0 0 0 0.39 1 1 NA NA NA NA NA 4 3 4 28.06 53.31 41.27 0 3 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 2 0.03 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 18 NA NA 0 0 38 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 1 NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 19 NA NA 0 0 38 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.39 NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 20 2396322 15319853 1 4 38 4 0 0 0 0 0.01 0.01 3 0 0 NA NA NA 4 3 3 28.06 53.99 39.61 0 2 1 Whitelist STAD-US 0.21 0.04 0 0 0.16 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 8 0.11 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 21 33563812 42419252 3 3 38 0 0 1 2 0 0.3 0 8 0 0 8 5 8 12 5 5 28.06 55.57 21.78 0 2 1 Whitelist STAD-US 0.62 0 0 0 0.59 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 6 0.08 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f 22 NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::d5efcde2-21e6-4071-9aa4-3c5688a45b3f X NA NA 0 0 38 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US d5efcde2-21e6-4071-9aa4-3c5688a45b3f STAD 0.46 2.15 Stomach-AdenoCA NA 0 0 stopgain,17_7577022_A_G,CN:1 2 STAD-US DO47737 TCGA-BR-8682 d5efcde2-21e6-4071-9aa4-3c5688a45b3f male alive C16.3 52 NA 51 NA Included Stomach-AdenoCA STAD US 0 1.68 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 1 229710193 230652339 1 1 35 1 0 0 0 0 0.39 0.52 2 NA NA NA NA NA NA NA NA 6.06 0.38 99.62 0 1 2 Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 2 33089899 33156951 1 1 35 0 1 0 0 0 0.39 1 2 0 NA NA NA NA NA NA NA 6.06 0.03 99.87 0 2 3 Whitelist STAD-US 0.62 1 0 NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 3 60262163 60678757 3 3 35 3 0 0 0 0 0.03 0.03 4 0 0 4 3 4 5 3 3 6.06 0.21 99.74 0 1 0 Whitelist STAD-US 0.41 0.12 0 0 0.33 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 6 0.09 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 4 163597670 163970521 1 1 35 1 0 0 0 0 0.39 0.73 2 NA NA NA NA NA NA NA NA 6.06 0.2 99.79 0 1 2 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 5 162593984 162665180 2 2 35 1 1 0 0 0 0.57 1 1 NA 0 NA NA NA NA NA NA 6.06 0 99.99 0 2 NA Whitelist STAD-US 0.68 1 NA 0 0.64 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 6 147806129 147879891 1 1 35 0 1 0 0 0 0.39 0.72 2 NA NA NA NA NA NA NA NA 6.06 0.04 99.81 0 2 3 Whitelist STAD-US 0.62 0.9 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 7 110657741 133292026 1 2 35 2 0 0 0 0 0.11 0.71 2 NA 0 NA NA NA NA NA NA 6.06 0.07 99.7 0 1 2 Whitelist STAD-US 0.54 0.9 NA 0 0.48 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 8 91390449 94021862 1 2 35 1 0 0 1 0 0.57 0.7 3 NA 0 NA NA NA NA NA NA 6.06 0.47 99.52 0 2 1 Whitelist STAD-US 0.68 0.89 NA 0 0.64 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 9 76627098 76653718 1 1 35 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 6.06 0.02 99.28 0 1 2 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 10 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 11 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 12 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 13 58250570 58272046 1 1 35 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 6.06 100 0 0 3 NA Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 14 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 15 31414848 52388761 3 3 35 0 0 2 1 0 0.3 0 4 0 0 4 4 4 5 5 5 6.06 9.74 90.13 0 1 2 Whitelist STAD-US 0.62 0.02 0 0 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 6 0.09 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 16 78583014 78659727 3 3 35 1 0 1 1 0 0.8 0.07 2 0 0 NA NA NA NA NA NA 6.06 0.08 99.8 0 1 2 Whitelist STAD-US 0.87 0.2 0 0 0.84 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 6 0.09 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 17 29271756 29442547 1 1 35 1 0 0 0 0 0.39 0.62 1 NA NA NA NA NA NA NA NA 6.06 0 99.98 0 2 NA Whitelist STAD-US 0.62 0.83 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 18 NA NA 0 0 35 0 0 0 0 0 NA 0.61 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.83 NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 19 20497846 20595621 1 1 35 0 0 1 0 0 0.39 0.5 1 NA NA NA NA NA NA NA NA 6.06 0 99.83 0 2 NA Whitelist STAD-US 0.62 0.75 NA NA 0.59 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 2 0.03 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 20 14666112 14981517 1 2 35 2 0 0 0 0 0.11 0.17 2 NA 0 NA NA NA NA NA NA 6.06 98.53 0.5 0 2 3 Whitelist STAD-US 0.54 0.39 NA 0 0.48 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 21 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef 22 NA NA 0 0 35 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e0916597-e489-45ef-a8f7-653a3c6591ef X 6965571 89663939 1 2 35 2 0 0 0 0 0.11 0.7 2 NA 0.04 NA NA NA NA NA NA 6.06 0.01 99.77 0 1 2 Whitelist STAD-US 0.54 0.89 NA 0.04 0.48 0 No STAD-US e0916597-e489-45ef-a8f7-653a3c6591ef STAD 0.78 2.05 Stomach-AdenoCA NA 4 0.06 NA 2 STAD-US DO38663 TCGA-BR-4280 e0916597-e489-45ef-a8f7-653a3c6591ef female alive C16.9 78 NA 0 NA Included Stomach-AdenoCA STAD US 0 0 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 1 145056910 158293680 5 12 565 2 2 1 0 7 0.53 0 13 0 0 13 4 5 61 14 14 42.79 53.67 42.97 0 3 4 Whitelist STAD-US 0.93 0.02 0 0 0.64 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 17 0.02 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 2 27385178 79482658 5 5 565 1 3 0 1 0 0.28 0.45 7 0 0 7 3 7 31 9 9 42.79 0.77 99.12 0 2 1 Whitelist STAD-US 0.62 0.69 0 0 0.59 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 3 20118117 84053508 3 7 565 0 0 2 1 4 0.3 0.1 23 0 0 23 9 23 42 9 9 42.79 35.77 64.03 0 1 2 Whitelist STAD-US 0.62 0.26 0 0 0.59 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 False positive; manually removed STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 4 21027238 21195871 3 3 565 0 1 1 1 0 0.8 1 1 0 0 NA NA NA 39 13 13 42.79 22.06 77.92 0 2 NA Whitelist STAD-US 0.87 1 0 0 0.84 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 6 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 5 3587780 163844373 1 17 565 11 1 0 1 4 0 0.02 22 0 0 22 14 22 23 15 23 42.79 72.02 25.32 0 1 2 Whitelist STAD-US 0 0.08 0 0 0 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 30 0.03 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 6 1632693 2284818 8 8 565 6 0 1 1 0 0.01 0.48 11 0 0 11 5 7 46 13 13 42.79 98.17 1.69 0 1 2 Whitelist STAD-US 0.28 0.72 0 0 0.21 0 Low confidence STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA With other complex events 16 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 7 67197235 113172401 2 11 565 4 4 0 0 3 0.05 0.11 28 0 0 28 12 25 52 12 12 42.79 44.73 52.6 7 2 1 Whitelist STAD-US 0.54 0.29 0 0 0.46 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 19 0.02 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 8 130188311 132738949 4 4 565 1 1 1 1 0 1 0.03 8 0 0 8 8 8 37 11 11 42.79 99.73 0.27 0 3 4 Whitelist STAD-US 1 0.1 0 0 1 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 8 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 9 3273649 130381646 1 15 565 10 5 0 0 0 0 0.33 24 0 0 24 9 11 24 9 9 42.79 33.16 66.69 0 2 3 Whitelist STAD-US 0.04 0.58 0 0 0.03 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 30 0.03 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 10 126595654 126797858 3 5 565 1 0 1 1 2 0.8 0.55 4 0 0 4 3 4 30 9 9 42.79 2.82 96.97 0 1 0 Whitelist STAD-US 3 0.62 0.77 0 0 0.84 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 8 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 11 2141918 86867429 1 13 565 5 3 0 2 3 0.16 0.07 24 0 0 24 7 24 25 7 7 42.79 13.23 82.7 0 2 3 Whitelist STAD-US 0.54 0.21 0 0 0.59 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 23 0.02 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 12 6355767 107018881 1 10 565 2 3 0 0 5 0.14 0 11 0 0 11 4 6 11 4 5 42.79 26.23 69.83 0 2 3 Whitelist STAD-US 14_8 0.62 0.01 0 0 0.59 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 15 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 13 73624651 73944878 5 5 565 1 4 0 0 0 0.04 0.82 7 0 0 7 0 3 25 13 13 42.79 4.58 95.42 0 4 1 Whitelist STAD-US 0.45 0.96 0 0 0.36 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 14 29414689 52502619 5 5 565 2 1 1 1 0 0.9 0.23 8 0 0 8 7 8 33 8 8 42.79 32.93 66.64 3 2 1 Whitelist STAD-US 0.93 0.46 0 0 0.92 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 15 24590097 27342631 3 5 565 1 0 1 1 2 0.8 0.37 3 0 0 NA NA NA 16 4 6 42.79 81.33 18.58 0 3 2 Whitelist STAD-US 5 0.93 0.62 0 0 0.84 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 8 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 16 35056875 89862765 1 16 565 8 7 0 0 1 0 0.19 27 0 0 27 9 27 32 9 9 42.79 73.25 26.16 0 2 3 Whitelist STAD-US 0.21 0.41 0 0 0.07 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 31 0.03 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 17 37841445 37958285 4 7 565 1 2 1 0 3 0.57 0 2 0 0 NA NA NA 38 7 11 42.79 42.85 52.71 0 2 4 Whitelist STAD-US 0.62 0 0 0 0.64 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 11 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 18 2566605 76926227 1 9 565 3 1 0 0 5 0.11 0.36 9 0 0 9 4 9 10 4 4 42.79 45.44 49.92 0 1 2 Whitelist STAD-US 0.62 0.61 0 0 0.48 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 13 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 19 17203181 58355172 1 2 565 2 0 0 0 0 0.11 0.13 4 0 0 4 0 3 5 3 3 42.79 50.38 41.03 0 1 2 Whitelist STAD-US 0.54 0.32 0 0 0.48 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 4 0 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 20 14355777 56280497 2 6 565 6 0 0 0 0 0 0.01 21 0 0 21 5 10 24 5 6 42.79 90.35 1.12 0 2 3 Whitelist STAD-US 0.04 0.03 0 0 0.03 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 12 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 21 14546653 37195795 5 5 565 1 2 1 1 0 0.9 0.01 14 0 0 14 6 11 18 7 15 42.79 48.6 28.47 0 2 3 Whitelist STAD-US 0.93 0.05 0 0 0.92 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d 22 22004723 35788939 1 5 565 4 1 0 0 0 0.04 0.84 8 0 0 8 6 8 10 7 7 42.79 15.74 84.26 0 2 1 Whitelist STAD-US 0.45 0.98 0 0 0.36 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 10 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d X 93851522 93877416 4 5 565 1 1 2 0 1 0.57 0.07 1 0 0 NA NA NA 14 14 14 42.79 61.77 34.8 0 1 NA Whitelist STAD-US 0.68 0.2 0 0 0.64 0 No STAD-US e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d STAD 0.73 2.22 Stomach-AdenoCA NA 9 0.01 frameshift_deletion,17_7577087_-_G,CN:2 2 STAD-US DO38423 TCGA-D7-6822 e2aaabd9-f4ba-4763-a28a-c14d46a4bc5d male alive C16.2 77 NA 131 NA Included Stomach-AdenoCA STAD US 0 4.31 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 1 8248281 246678031 1 13 303 6 5 0 0 2 0.01 0.34 17 0 0 17 5 9 19 5 9 60.44 50.51 49.49 2 2 3 Whitelist STAD-US 0.54 0.59 0 0 0.2 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 24 0.04 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 2 141732859 141929698 2 2 303 2 0 0 0 0 0.11 0.68 4 0 0 4 0 3 25 16 16 60.44 93.32 3.99 0 0 1 Whitelist STAD-US 0.54 0.88 0 0 0.48 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 4 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 3 374952 134097822 17 39 303 4 5 4 4 22 0.98 0 42 0 0 42 4 7 51 6 7 60.44 52.21 44.65 1 2 4 Whitelist STAD-US 12_7 0.62 0 0 0 0.99 1 Low confidence STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA With other complex events 56 0.09 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 4 12561962 183458255 1 8 303 4 2 0 1 1 0.17 0.17 11 0 0 11 3 7 13 3 3 60.44 99.89 0 0 3 4 Whitelist STAD-US 0.62 0.38 0 0 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 15 0.02 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 5 36999523 176104561 1 7 303 1 3 0 0 3 0.11 0.12 6 0 0 6 3 4 8 4 4 60.44 99.76 0.11 0 4 2 Whitelist STAD-US 0.77 0.31 0 0 0.48 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 11 0.02 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 6 23403850 157533190 1 6 303 1 2 1 0 2 0.57 0.4 11 0 0 11 6 10 16 8 8 60.44 63.21 33.95 0 2 4 Whitelist STAD-US 7 0.62 0.64 0 0 0.64 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 10 0.02 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 7 5548287 146623412 1 9 303 2 2 0 1 4 0.53 0.7 9 0 0 9 6 9 9 6 6 60.44 58.04 41.73 0 2 4 Whitelist STAD-US 0.62 0.9 0 0 0.64 1 Linked to low confidence STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA Before polyploidization 14 0.02 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 8 78419564 102111423 1 3 303 0 3 0 0 0 0.03 0.03 1 0 0 NA NA NA NA NA NA 60.44 99.99 0 0 4 NA Whitelist STAD-US 0.41 0.1 0 0 0.33 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 6 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 9 9307084 112645486 1 4 303 4 0 0 0 0 0.01 0.1 10 0 0 10 6 10 11 7 7 60.44 2.84 94.05 0 2 0 Whitelist STAD-US 0.21 0.27 0 0 0.16 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 8 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 10 28798120 77358643 1 6 303 2 3 0 0 1 0.14 0.89 7 0 0 7 6 7 11 9 9 60.44 99.39 0.5 0 4 5 Whitelist STAD-US 0.54 1 0 0 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 11 0.02 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 11 8014765 116673670 1 4 303 2 2 0 0 0 0.26 0.22 9 0 0 9 4 6 10 4 6 60.44 63.23 36.22 0 2 4 Whitelist STAD-US 0.62 0.45 0 0 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 8 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 12 38025321 70035232 49 67 303 7 9 16 17 18 0.11 0 61 0 0 61 7 8 86 7 8 60.44 38.05 58.21 6 4 2 Whitelist STAD-US 0.62 0 0 0 0.48 1 High confidence STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA With other complex events 116 0.19 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 13 75541784 75796856 2 2 303 0 0 1 1 0 0.57 0.87 2 0 0 NA NA NA 7 5 7 60.44 100 0 0 4 6 Whitelist STAD-US 0.68 1 0 0 0.64 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 4 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 14 45601258 45997197 1 2 303 2 0 0 0 0 0.11 0.18 4 0 0 4 4 4 9 5 5 60.44 25.13 71.68 0 1 2 Whitelist STAD-US 0.54 0.4 0 0 0.48 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 4 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 15 60669982 60683720 1 1 303 0 1 0 0 0 0.39 0.29 1 0 NA NA NA NA NA NA NA 60.44 21.54 73.52 0 2 NA Whitelist STAD-US 0.62 0.54 0 NA 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 2 0 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 16 6509882 78825234 1 4 303 2 0 0 0 2 0.11 0.86 11 0 0 11 3 7 12 3 7 60.44 52.15 43.11 0 4 2 Whitelist STAD-US 0.21 0.99 0 0 0.48 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 6 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 17 32268566 32384550 1 1 303 0 1 0 0 0 0.39 0.07 2 NA NA NA NA NA 4 4 4 60.44 99.95 0 0 3 4 Whitelist STAD-US 0.62 0.21 NA NA 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 2 0 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 18 8088024 55141225 1 3 303 1 2 0 0 0 0.3 0.21 6 0 0 6 3 5 7 3 3 60.44 0.44 99.52 0 2 0 Whitelist STAD-US 0.62 0.43 0 0 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 6 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 19 40462439 40475666 1 1 303 0 1 0 0 0 0.39 0.21 1 0 NA NA NA NA 10 5 5 60.44 62.66 28.68 0 4 NA Whitelist STAD-US 0.62 0.44 0 NA 0.59 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 2 0 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 20 14757082 34600578 1 2 303 1 1 0 0 0 0.57 0.23 3 0 0 NA NA NA 4 3 3 60.44 53.05 39.93 0 1 2 Whitelist STAD-US 0.68 0.46 0 0 0.64 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 4 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 21 29131446 36219500 1 2 303 2 0 0 0 0 0.11 0.03 4 0 0 4 3 4 14 6 6 60.44 21.6 47.56 0 2 0 Whitelist STAD-US 0.54 0.12 0 0 0.48 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 4 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 22 NA NA 0 0 303 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 0 0 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::e37cae9e-0656-4b89-b326-739a5cc859e0 X 6814711 7074731 3 3 303 3 0 0 0 0 0.03 0.69 5 0 0 5 0 4 29 5 14 60.44 39.07 57.54 0 2 0 Whitelist STAD-US 0.41 0.89 0 0 0.33 1 No STAD-US e37cae9e-0656-4b89-b326-739a5cc859e0 STAD 0.74 3.26 Stomach-AdenoCA NA 6 0.01 NA 0 STAD-US DO38238 TCGA-D7-6519 e37cae9e-0656-4b89-b326-739a5cc859e0 female alive C16.0 64 NA 476 NA Included Stomach-AdenoCA STAD US 0 15.66 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 1 98207875 108188791 1 2 125 1 1 0 0 0 0.57 0.74 1 0 0 NA NA NA NA NA NA 62.23 32.47 67.53 0 2 NA Whitelist STAD-US 0.68 0.91 0 0 0.64 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 2 51430472 206201741 1 5 125 3 2 0 0 0 0.14 0.52 6 0 0 6 3 6 7 3 3 62.23 99.9 0 0 3 0 Whitelist STAD-US 0.62 0.76 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 10 0.04 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 3 4513439 60695284 1 4 125 3 1 0 0 0 0.11 1 5 0 0 5 5 5 6 5 5 62.23 99.95 0 0 1 0 Whitelist STAD-US 0.54 1 0 0 0.48 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 8 0.03 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 4 114020838 190890649 1 4 125 2 0 1 1 0 0.57 0.86 5 0 0 5 5 5 6 6 6 62.23 99.85 0 0 0 1 Whitelist STAD-US 0.68 0.99 0 0 0.64 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 8 0.03 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 5 12572061 127490076 1 3 125 2 1 0 0 0 0.3 0.85 4 0 0 4 3 4 4 3 4 62.23 99.86 0.02 0 3 1 Whitelist STAD-US 0.62 0.99 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 6 2080547 147886292 1 3 125 1 2 0 0 0 0.3 0.71 4 0 0 4 3 4 5 3 3 62.23 0.1 99.75 0 2 1 Whitelist STAD-US 0.62 0.9 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 7 110618033 110878607 2 2 125 2 0 0 0 0 0.11 0.23 4 0 0 4 0 3 12 5 7 62.23 99.53 0.25 0 3 1 Whitelist STAD-US 0.54 0.46 0 0 0.48 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 8 NA NA 0 0 125 0 0 0 0 0 NA 0.69 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.89 0 NA NA 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 9 78521442 120942868 1 3 125 1 1 0 0 1 0.57 0.35 3 0 0 NA NA NA 6 3 3 62.23 74.44 24.87 0 0 1 Whitelist STAD-US 0.62 0.6 0 0 0.64 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 5 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 10 56186631 77240169 1 3 125 2 1 0 0 0 0.3 1 2 0 0 NA NA NA 5 5 5 62.23 0.24 99.65 0 1 2 Whitelist STAD-US 0.62 1 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 11 26649353 85539217 1 6 125 1 3 1 0 1 0.28 0.05 7 0 0 7 3 7 7 3 3 62.23 98.53 1.04 0 1 2 Whitelist STAD-US 0.68 0.16 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 11 0.04 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 12 121818147 121955901 1 1 125 1 0 0 0 0 0.39 0.29 2 0 NA NA NA NA NA NA NA 62.23 0.1 99.81 0 1 2 Whitelist STAD-US 0.62 0.54 0 NA 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 13 NA NA 0 0 125 0 0 0 0 0 NA 0.14 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.33 NA NA NA 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 14 32106363 106199277 1 3 125 1 0 1 0 1 0.57 0.8 2 0 0 NA NA NA 4 4 4 62.23 60.03 39.05 0 1 2 Whitelist STAD-US 0.62 0.95 0 0 0.64 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 5 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 15 67196095 67402399 1 1 125 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 62.23 99.64 0.2 0 1 2 Whitelist STAD-US 0.62 0.81 NA NA 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 16 78677192 78823658 2 2 125 2 0 0 0 0 0.11 0 2 0 0 NA NA NA 12 4 4 62.23 0.9 99.09 0 0 1 Whitelist STAD-US 0.54 0 0 0 0.48 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 17 20662121 52130074 2 2 125 0 0 1 1 0 0.57 0.01 15 0 0 15 3 4 16 3 4 62.23 59.18 36.35 0 1 2 Whitelist STAD-US 0.68 0.04 0 0 0.64 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 18 NA NA 0 0 125 0 0 0 0 0 NA 0.78 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA 0.93 NA NA NA 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 19 28282680 57790484 1 3 125 2 0 0 1 0 0.3 0.04 10 0 0 10 3 3 10 3 3 62.23 92.72 0 0 3 1 Whitelist STAD-US 0.62 0.13 0 0 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 6 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 20 48713207 48770320 1 1 125 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 62.23 99.02 0 0 3 4 Whitelist STAD-US 0.62 0.76 NA NA 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 21 NA NA 0 0 125 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist STAD-US NA NA NA NA NA 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 0 0 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 22 26355195 26644939 1 1 125 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 62.23 100 0 0 0 1 Whitelist STAD-US 0.62 1 NA NA 0.59 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 2 0.01 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 STAD-US::fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 X 41489506 142499527 1 2 125 2 0 0 0 0 0.11 0.22 1 0.01 0 NA NA NA NA NA NA 62.23 100 0 0 1 NA Whitelist STAD-US 0.54 0.45 0.01 0 0.48 0 No STAD-US fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 STAD 0.32 1.94 Stomach-AdenoCA NA 4 0.02 NA 2 STAD-US DO47785 TCGA-HU-A4H0 fe45eaee-ff0c-4d52-b18c-04dc2d64d3b4 male alive C16.2 72 NA 64 NA Included Stomach-AdenoCA STAD US 0 2.11 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 1 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 2 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 3 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 4 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 5 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 6 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 7 17578484 18314280 2 2 22 0 0 1 1 0 0.57 0.03 4 0 0 4 4 4 5 5 5 1.68 0.02 99.74 3 1 2 Whitelist THCA-US 0.68 0.11 0 0 0.64 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 4 0.09 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 8 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 9 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 10 43499619 48588565 8 8 22 0 4 3 1 0 0.17 0 16 0 0 16 16 16 25 25 25 1.68 38.08 58.52 0 1 2 Whitelist THCA-US 0.62 0 0 0 0.59 1 High confidence THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA Canonical without polyploidization 16 0.36 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 11 17271954 18464344 1 1 22 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 1.68 0.88 98.68 0 1 2 Whitelist THCA-US 0.62 1 NA NA 0.59 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 2 0.05 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 12 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 13 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 14 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 15 22809873 27447205 4 4 22 1 1 1 1 0 1 0 1 0 0 NA NA NA NA NA NA 1.68 0 100 0 2 NA Whitelist THCA-US 1 0 0 0 1 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 8 0.18 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 16 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 17 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 18 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 19 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 20 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 21 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 22 NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::085ffcdc-8600-42e2-852a-506465f716a2 X NA NA 0 0 22 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 1 No THCA-US 085ffcdc-8600-42e2-852a-506465f716a2 THCA 0.75 1.98 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39910 TCGA-DE-A3KN 085ffcdc-8600-42e2-852a-506465f716a2 female alive C73 49 NA 286 NA Included Thy-AdenoCA THCA US 0 9.41 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 2 NA NA 0 0 3 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.08 NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 7 23510038 49679429 1 2 3 0 0 0 1 1 0.39 0 1 NA NA NA NA NA NA NA NA 0 0 99.77 0 2 NA Whitelist THCA-US 0.68 0 NA NA 0.59 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 3 0.5 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::0c50a2c2-1d4c-45ca-9127-f96d4db18daf X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 0c50a2c2-1d4c-45ca-9127-f96d4db18daf THCA 0.97 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48159 TCGA-EM-A3AL 0c50a2c2-1d4c-45ca-9127-f96d4db18daf female alive C73 45 NA 203 NA Included Thy-AdenoCA THCA US 0 6.68 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 1 86811630 87520252 2 5 19 1 0 0 1 3 0.57 0 3 0 0 NA NA NA NA NA NA 0.05 0.16 99.84 0 2 1 Whitelist THCA-US 0.62 0 0 0 0.64 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 7 0.18 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 2 26235948 178097620 2 6 19 0 2 0 0 4 0.11 0 1 0 0 NA NA NA NA NA NA 0.05 0 99.9 0 2 NA Whitelist THCA-US 0.54 0.02 0 0 0.48 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 8 0.21 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 3 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 4 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 5 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 6 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 7 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 8 133906634 134054398 1 4 19 0 2 0 0 2 0.11 0 1 0 0 NA NA NA NA NA NA 0.05 0 99.99 0 2 NA Whitelist THCA-US 0.54 0 0 0 0.48 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 6 0.16 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 9 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 10 69747731 92893483 2 5 19 1 0 1 0 3 0.57 0 3 0 0 NA NA NA NA NA NA 0.05 0.01 99.81 0 2 0 Whitelist THCA-US 0.62 0 0 0 0.64 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 7 0.18 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 11 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 12 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 13 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 14 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 15 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 16 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 17 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 18 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 19 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 20 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 21 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 22 NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::2f59f12d-ca0c-4ac6-9718-98a6d455af46 X NA NA 0 0 19 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 2f59f12d-ca0c-4ac6-9718-98a6d455af46 THCA 0.38 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39046 TCGA-EM-A2CP 2f59f12d-ca0c-4ac6-9718-98a6d455af46 female alive C73 26 NA 91 NA Included Thy-AdenoCA THCA US 0 2.99 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 6 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.02 NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 12 NA NA 0 0 2 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.25 NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 15 NA NA 0 0 2 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.17 NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::39d90499-8549-4da5-b391-c421f18facf1 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 39d90499-8549-4da5-b391-c421f18facf1 THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40193 TCGA-FE-A3PD 39d90499-8549-4da5-b391-c421f18facf1 female alive C73 17 NA 1913 NA Included Thy-AdenoCA THCA US 0 62.93 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 1 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 2 NA NA 0 0 10 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.43 NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 3 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 4 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 5 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 6 NA 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NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 12 NA NA 0 0 10 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0 0 NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 13 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 14 106348044 106376758 1 1 10 1 0 0 0 0 0.39 0.27 1 NA NA NA NA NA NA NA NA 0 0 99.09 0 2 NA Whitelist THCA-US 0.62 0.52 NA NA 0.59 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 2 0.1 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 15 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 16 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 17 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 18 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 19 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 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THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 22 NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::3b48cc5e-3396-4dd5-893d-54b75b98b016 X NA NA 0 0 10 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 3b48cc5e-3396-4dd5-893d-54b75b98b016 THCA 0.91 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40664 TCGA-DJ-A13W 3b48cc5e-3396-4dd5-893d-54b75b98b016 female alive C73 45 NA 444 NA Included Thy-AdenoCA THCA US 0 14.61 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 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THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA 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TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::4fc8e011-4433-4537-b03f-457a3a70240f X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 4fc8e011-4433-4537-b03f-457a3a70240f THCA 0.49 1.82 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38899 TCGA-EL-A4K6 4fc8e011-4433-4537-b03f-457a3a70240f male alive C73 75 NA 874 NA Included Thy-AdenoCA THCA US 0 28.75 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 5 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.09 NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 10 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.39 NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 17 41477394 41507406 1 1 4 1 0 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 0.39 0 100 0 2 NA Whitelist THCA-US 0.62 0.27 NA NA 0.59 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 2 0.25 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 19 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.01 NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::63b01b43-a68a-4046-89b0-736ba4d08504 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 63b01b43-a68a-4046-89b0-736ba4d08504 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39210 TCGA-FK-A3SD 63b01b43-a68a-4046-89b0-736ba4d08504 female alive C73 61 NA 27 NA Included Thy-AdenoCA THCA US 0 0.89 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 2 29448181 37137826 1 1 1 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 0.74 3.16 96.73 0 1 2 Whitelist THCA-US 0.62 0.24 NA NA 0.59 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 2 1 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::6ee95dc8-2bac-4691-afa2-8222e07506ad X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 6ee95dc8-2bac-4691-afa2-8222e07506ad THCA 0.64 1.99 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39216 TCGA-DJ-A3US 6ee95dc8-2bac-4691-afa2-8222e07506ad female alive C73 37 NA 630 NA Included Thy-AdenoCA THCA US 0 20.72 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 7 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.02 NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 12 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.01 NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::7629f864-a009-4aa9-bf7e-2d99e00d294e X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 7629f864-a009-4aa9-bf7e-2d99e00d294e THCA 0.53 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39072 TCGA-ET-A4KN 7629f864-a009-4aa9-bf7e-2d99e00d294e female alive C73 51 NA 122 NA Included Thy-AdenoCA THCA US 0 4.01 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 2 NA NA 0 0 3 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.08 NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 7 NA NA 0 0 3 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.04 NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 10 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 14 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 21 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::77bb90f0-e923-4e28-bb88-4d6b420e0b5c X 7200548 7502100 1 1 3 0 1 0 0 0 0.39 0.14 2 NA NA NA NA NA NA NA NA 0.01 0.19 99.59 0 2 3 Whitelist THCA-US 0.62 0.34 NA NA 0.59 0 No THCA-US 77bb90f0-e923-4e28-bb88-4d6b420e0b5c THCA 0.88 2 Thy-AdenoCA NA 2 0.33 NA 2 THCA-US DO38978 TCGA-DE-A2OL 77bb90f0-e923-4e28-bb88-4d6b420e0b5c female alive C73 44 NA 161 NA Included Thy-AdenoCA THCA US 0 5.3 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 3 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.03 NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 7 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.02 NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 785803bb-42a8-4afb-b7b4-58c114894408 THCA 0.77 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39127 TCGA-FK-A3S3 785803bb-42a8-4afb-b7b4-58c114894408 female alive C73 43 NA 1401 NA Included Thy-AdenoCA THCA US 0 46.09 THCA-US::785803bb-42a8-4afb-b7b4-58c114894408 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA 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861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 5 32373082 33474631 1 2 6 0 0 1 1 0 0.57 0 1 NA 0 NA NA NA NA NA NA 0.32 0 99.86 0 2 NA Whitelist THCA-US 0.68 0 NA 0 0.64 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 4 0.33 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 6 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 7 NA NA 0 0 6 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist 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THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 10 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 13 21134151 31053177 1 1 6 1 0 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 0.32 8.61 91.39 0 1 2 Whitelist THCA-US 0.62 0.41 NA NA 0.59 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 2 0.17 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 14 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 16 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e 22 NA NA 0 0 6 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.21 NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::861f94ce-45ff-4588-addb-e1ea48878c2e X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 861f94ce-45ff-4588-addb-e1ea48878c2e THCA 0.51 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40759 TCGA-EL-A3T0 861f94ce-45ff-4588-addb-e1ea48878c2e female alive C73 45 NA 3976 NA Included Thy-AdenoCA THCA US 0 130.79 THCA-US::8a233b01-2959-467f-8950-02be16309156 1 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 2 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 1 NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 3 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 4 147367792 163826549 1 2 18 2 0 0 0 0 0.11 0.34 1 NA 0 NA NA NA NA NA NA 24.93 0 99.8 0 2 NA Whitelist THCA-US 0.54 0.59 NA 0 0.48 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 4 0.11 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 5 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 6 NA NA 0 0 18 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 1 NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 7 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 8 NA NA 0 0 18 0 0 0 0 0 NA 0.23 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.47 NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 9 NA NA 0 0 18 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.75 NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 10 43473321 43607031 1 1 18 1 0 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 24.93 0.1 99.74 0 1 2 Whitelist THCA-US 0.62 0.01 0 NA 0.59 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 2 0.06 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 11 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 12 1367154 92355159 2 5 18 0 0 0 2 3 0.11 0 3 0 0 NA NA NA NA NA NA 24.93 0.01 99.91 0 2 1 Whitelist THCA-US 0.68 0 0 0 0.48 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 7 0.19 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 13 NA NA 0 0 18 0 0 0 0 0 NA 0.47 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.71 NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 14 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 15 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 16 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 17 72925800 72970395 1 1 18 0 1 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 24.93 0.05 99.93 0 2 3 Whitelist THCA-US 0.62 0.24 NA NA 0.59 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 2 0.06 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 18 75531150 75543151 1 1 18 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA NA NA NA 24.93 0.02 99.95 0 1 2 Whitelist THCA-US 0.62 0.63 NA NA 0.59 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 2 0.06 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 19 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 20 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 21 19607766 19626237 1 1 18 1 0 0 0 0 0.39 0.2 2 NA NA NA NA NA 4 3 3 24.93 7.1 70.25 0 1 2 Whitelist THCA-US 0.62 0.42 NA NA 0.59 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 2 0.06 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 22 NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8a233b01-2959-467f-8950-02be16309156 X NA NA 0 0 18 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8a233b01-2959-467f-8950-02be16309156 THCA 0.59 2.25 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39635 TCGA-EL-A3T9 8a233b01-2959-467f-8950-02be16309156 female deceased C73 69 174 NA NA Included Thy-AdenoCA THCA US 1 5.72 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 2 NA NA 0 0 2 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.03 NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 7 NA NA 0 0 2 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.02 NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8cfb88f6-7b37-4f1e-882b-3a368b604167 X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8cfb88f6-7b37-4f1e-882b-3a368b604167 THCA 0.59 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO48084 TCGA-BJ-A45K 8cfb88f6-7b37-4f1e-882b-3a368b604167 male alive C73 33 NA 273 NA Included Thy-AdenoCA THCA US 0 8.98 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 7 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.07 NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 14 80647921 102574777 1 2 4 0 0 0 1 1 0.39 0 3 0 0 NA NA NA NA NA NA 0.11 1.64 97.44 0 2 1 Whitelist THCA-US 0.68 0 0 0 0.59 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 3 0.38 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 THCA 0.86 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39016 TCGA-EL-A3H1 8d54a2ed-03f1-4a23-bdd2-f3395f5d3716 female deceased C73 66 1500 NA NA Included Thy-AdenoCA THCA US 1 49.34 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 1 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 4 18177107 18271260 1 1 5 0 0 1 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 0 0 99.77 0 2 NA Whitelist THCA-US 0.62 0.54 NA NA 0.59 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 2 0.2 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 5 17508274 17621869 1 1 5 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 0 0 99.86 0 2 NA Whitelist THCA-US 0.62 0.52 NA NA 0.59 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 2 0.2 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 10 43611768 61656351 2 2 5 0 0 1 1 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 0 0 99.82 0 2 NA Whitelist THCA-US 0.68 0.08 NA 0 0.64 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 4 0.4 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 13 NA NA 0 0 5 0 0 0 0 0 NA 0.16 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.37 NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 17 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 18 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 19 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 20 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 21 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 22 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a09d0be0-fd41-4b30-b488-9a9f2abef8e7 X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a09d0be0-fd41-4b30-b488-9a9f2abef8e7 THCA 0.94 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38901 TCGA-EL-A3TB a09d0be0-fd41-4b30-b488-9a9f2abef8e7 female alive C73 47 NA 2519 NA Included Thy-AdenoCA THCA US 0 82.86 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 3 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 4 33006397 33068197 1 1 1 1 0 0 0 0 0.39 0.07 2 NA NA NA NA NA NA NA NA 0 0.03 99.95 0 1 2 Whitelist THCA-US 0.62 0.2 NA NA 0.59 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 2 1 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 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NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::a65ec434-9ae0-453f-b440-08bf25558fd1 X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US a65ec434-9ae0-453f-b440-08bf25558fd1 THCA 0.6 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39956 TCGA-EM-A2OW a65ec434-9ae0-453f-b440-08bf25558fd1 female alive C73 37 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 1 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 2 20652301 62227314 4 9 12 1 1 0 2 5 0.57 0 1 0 0 NA NA NA NA NA NA 0.01 0 99.89 0 2 NA Whitelist THCA-US 0.97 0 0 0 0.64 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 13 0.54 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 3 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 4 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 5 163137987 163178761 1 3 12 1 0 0 0 2 0.39 0.04 1 NA 0 NA NA NA NA NA NA 0.01 0 99.86 0 2 NA Whitelist THCA-US 0.62 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THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 8 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 9 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 10 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 11 NA NA 0 0 12 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.27 NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 12 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 13 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 14 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 15 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 16 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 17 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 18 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 19 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 20 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 21 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b 22 NA NA 0 0 12 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::acb80b76-2394-4250-8687-60e40e16e83b X NA NA 0 0 12 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.31 NA NA NA 0 No THCA-US acb80b76-2394-4250-8687-60e40e16e83b THCA 0.54 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40069 TCGA-DJ-A4UT acb80b76-2394-4250-8687-60e40e16e83b female alive C73 32 NA 371 NA Included Thy-AdenoCA THCA US 0 12.2 THCA-US::afb00cd4-e5da-4251-86fb-532c3f65324c 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 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0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 2 NA NA 0 0 4 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.13 NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 6 98316660 98488728 2 2 4 0 0 1 1 0 0.57 0.02 1 NA 0 NA NA NA NA NA NA 0 0 99.84 0 2 NA Whitelist THCA-US 0.68 0.08 NA 0 0.64 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 4 0.5 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 7 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.07 NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 TCGA-BJ-A28V bed1fb3c-4459-460e-8190-29211857fa73 female alive C73 80 NA -210 NA Included Thy-AdenoCA THCA US 0 -6.91 THCA-US::bed1fb3c-4459-460e-8190-29211857fa73 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US bed1fb3c-4459-460e-8190-29211857fa73 THCA 0.79 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39070 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NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 6 54822733 54850727 1 1 2 0 0 0 1 0 0.39 0.12 1 NA NA NA NA NA NA NA NA 7.33 0 99.82 0 2 NA Whitelist THCA-US 0.62 0.3 NA NA 0.59 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 2 0.5 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b X NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.26 NA NA NA 0 No THCA-US c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b THCA 0.45 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO219585 TCGA-DJ-A13L c7a2f394-3e3f-4c90-9f1e-f2be3e5b0d6b male alive C73 85 NA 303 NA Included Thy-AdenoCA THCA US 0 9.97 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 1 74385662 74612784 1 2 5 1 0 1 0 0 0.57 0.05 1 NA 0 NA NA NA NA NA NA 0.39 0 100 0 2 NA Whitelist THCA-US 0.68 0.17 NA 0 0.64 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 4 0.4 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 2 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 3 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 4 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 5 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 6 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 7 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 8 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 9 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 10 43611774 61631186 3 3 5 1 0 1 1 0 0.8 0 1 0 0 NA NA NA NA NA NA 0.39 0 99.81 0 2 NA Whitelist THCA-US 0.87 0.01 0 0 0.84 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 6 0.6 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 11 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 12 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 13 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 14 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 15 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa 16 NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 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0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e35b2928-8784-45d0-a71a-a2df161542fa X NA NA 0 0 5 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e35b2928-8784-45d0-a71a-a2df161542fa THCA 0.58 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO38966 TCGA-DJ-A2Q1 e35b2928-8784-45d0-a71a-a2df161542fa female alive C73 44 NA 284 NA Included Thy-AdenoCA THCA US 0 9.34 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 2 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0 NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 7 NA NA 0 0 4 0 0 0 0 0 NA 0.02 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.07 NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 8 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.06 NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e4b08e66-0772-4956-8670-e5c6553eecbe X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e4b08e66-0772-4956-8670-e5c6553eecbe THCA 0.88 1.93 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40274 TCGA-DJ-A1QL e4b08e66-0772-4956-8670-e5c6553eecbe male alive C73 70 NA 219 NA Included Thy-AdenoCA THCA US 0 7.2 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 1 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 2 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 3 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 4 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 5 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 6 NA NA 0 0 6 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.15 NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 7 NA NA 0 0 6 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.13 NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 8 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 9 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 10 NA NA 0 0 6 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.11 NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 11 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 12 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 13 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 14 NA NA 0 0 6 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0 NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 15 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 16 NA NA 0 0 6 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.05 NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 17 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 18 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 19 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 20 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 21 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 22 NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::e8f56d0f-eee4-4def-a43a-dec91f4382a1 X NA NA 0 0 6 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US e8f56d0f-eee4-4def-a43a-dec91f4382a1 THCA 0.87 1.95 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO40484 TCGA-EM-A3AQ e8f56d0f-eee4-4def-a43a-dec91f4382a1 female alive C73 85 NA 262 NA Included Thy-AdenoCA THCA US 0 8.62 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 4 NA NA 0 0 2 0 0 0 0 0 NA 0.13 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.32 NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 5 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 7 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 9 NA NA 0 0 2 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.22 NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 19 NA NA 0 0 2 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.14 NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::ebbd54ad-7b97-4081-ad11-7f7f3ce74eef X NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US ebbd54ad-7b97-4081-ad11-7f7f3ce74eef THCA 0.89 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39481 TCGA-E8-A418 ebbd54ad-7b97-4081-ad11-7f7f3ce74eef female alive C73 75 NA 45 NA Included Thy-AdenoCA THCA US 0 1.48 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 1 185566394 185669958 1 1 7 0 1 0 0 0 0.39 0.44 1 NA NA NA NA NA NA NA NA 6.69 0 100 0 2 NA Whitelist THCA-US 0.62 0.69 NA NA 0.59 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 2 0.14 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 2 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 3 NA NA 0 0 7 0 0 0 0 0 NA 0.4 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.64 NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 6 NA NA 0 0 7 0 0 0 0 0 NA 0.35 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.6 NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 8 NA NA 0 0 7 0 0 0 0 0 NA 0.31 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.55 NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 10 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 12 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 14 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 19 22034144 54233355 2 2 7 0 0 1 1 0 0.57 0.01 1 NA 0 NA NA NA NA NA NA 6.69 0 99.83 0 2 NA Whitelist THCA-US 0.68 0.04 NA 0 0.64 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 4 0.29 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 21 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9ceffc0-d544-418d-b4a9-bd3c84e37026 X 129183928 129262119 1 1 7 1 0 0 0 0 0.39 0.3 2 NA NA NA NA NA NA NA NA 6.69 100 0 0 0 1 Whitelist THCA-US 0.62 0.55 NA NA 0.59 0 No THCA-US f9ceffc0-d544-418d-b4a9-bd3c84e37026 THCA 0.95 1.91 Thy-AdenoCA NA 2 0.14 NA 2 THCA-US DO39306 TCGA-BJ-A0Z2 f9ceffc0-d544-418d-b4a9-bd3c84e37026 male alive C73 57 NA 232 NA Included Thy-AdenoCA THCA US 0 7.63 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 7 138215610 140549926 2 2 4 0 0 1 1 0 0.57 0.02 2 NA 0 NA NA NA NA NA NA 0 0.05 99.72 0 1 2 Whitelist THCA-US 0.68 0.07 NA 0 0.64 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 4 0.5 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 10 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.05 NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 15 NA NA 0 0 4 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.02 NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 THCA 0.59 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39022 TCGA-DJ-A2Q8 f9cf605f-f287-4eba-8e8f-8ba47e14ecc4 female alive C73 47 NA 215 NA Included Thy-AdenoCA THCA US 0 7.07 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 1 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 2 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 3 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 4 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 5 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 6 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 7 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 8 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 9 NA NA 0 0 9 0 0 0 0 0 NA 0.05 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0.15 NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 10 43610194 129627378 2 6 9 1 0 0 1 4 0.57 0 1 0 0 NA NA NA NA NA NA 0 0 99.89 0 2 NA Whitelist THCA-US 0.68 0 0 0 0.64 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 8 0.44 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 11 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 12 NA NA 0 0 9 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA 0 0 NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 13 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 14 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 15 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 16 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 17 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 18 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 19 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 20 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 21 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 22 NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 THCA-US::fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 X NA NA 0 0 9 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist THCA-US NA NA NA NA NA 0 No THCA-US fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 THCA 0.63 2 Thy-AdenoCA NA 0 0 NA 2 THCA-US DO39534 TCGA-EM-A3FQ fef9c64f-5959-4da0-aaa2-66b56fc7b4c3 female alive C73 19 NA 150 NA Included Thy-AdenoCA THCA US 0 4.93 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 1 8100196 203073265 1 14 137 1 5 0 0 8 0.01 0 9 0 0 9 9 9 14 10 10 12.33 0.55 99.44 0 2 3 Whitelist UCEC-US 0.54 0 0 0 0.19 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 20 0.07 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 2 10463144 232453165 1 16 137 1 5 1 0 9 0.04 0.01 16 0 0 16 6 9 20 8 8 12.33 39.03 60.87 0 2 3 Whitelist UCEC-US 1_10 0.54 0.04 0 0 0.38 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 23 0.08 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 3 42641248 190590144 1 9 137 1 3 0 0 5 0.11 1 12 0 0 12 4 6 13 4 5 12.33 39.84 60.11 1 2 3 Whitelist UCEC-US 19 0.68 1 0 0 0.48 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 13 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 4 1939652 99454694 1 3 137 1 1 0 1 0 0.8 0.61 4 0 0 4 3 4 9 5 5 12.33 0.74 99.24 0 2 1 Whitelist UCEC-US 0.87 0.82 0 0 0.84 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 5 36374792 176870410 1 4 137 0 4 0 0 0 0.01 0.11 6 0 0 6 6 6 7 7 7 12.33 0.37 99.5 1 2 3 Whitelist UCEC-US 0.21 0.29 0 0 0.16 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 6 30689459 162853873 1 8 137 0 6 0 0 2 0 1 10 0 0 10 10 10 11 11 11 12.33 0.64 99.22 0 2 3 Whitelist UCEC-US 0.06 1 0 0 0.03 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 7 5433712 148932508 2 5 137 0 1 1 0 3 0.57 0.45 10 0 0 10 10 10 11 11 11 12.33 0.99 98.78 0 2 3 Whitelist UCEC-US 0.68 0.7 0 0 0.64 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 8 56356147 134231926 1 6 137 0 2 0 0 4 0.11 1 4 0 0 4 3 4 6 3 5 12.33 25.59 74.41 0 2 3 Whitelist UCEC-US 2 0.54 1 0 0 0.48 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 9 32812251 131242330 1 3 137 0 3 0 0 0 0.03 0.5 5 0 0 5 3 5 8 3 8 12.33 0.48 96.44 0 2 3 Whitelist UCEC-US 0.41 0.75 0 0 0.33 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 10 61280275 102784638 1 6 137 0 3 0 0 3 0.03 0.3 4 0 0 4 4 4 9 9 9 12.33 0.61 99.21 0 2 3 Whitelist UCEC-US 2 0.62 0.55 0 0 0.33 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 11 63566548 118187462 1 3 137 0 3 0 0 0 0.03 0.22 6 0 0 6 6 6 7 7 7 12.33 0.53 99.05 0 2 3 Whitelist UCEC-US 0.41 0.45 0 0 0.33 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 12 49155033 112912196 1 5 137 0 5 0 0 0 0 0.84 6 0 0 6 6 6 7 7 7 12.33 0.48 99.44 0 2 3 Whitelist UCEC-US 0.1 0.98 0 0 0.07 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 13 103041455 103395441 1 1 137 0 1 0 0 0 0.39 0.1 1 NA NA NA NA NA NA NA NA 12.33 0 100 0 2 NA Whitelist UCEC-US 0.62 0.26 NA NA 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 14 24826217 105404171 1 9 137 0 8 0 0 1 0 0.04 15 0 0 15 13 13 16 14 14 12.33 1.31 97.78 0 2 3 Whitelist UCEC-US 0.02 0.14 0 0 0 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 15 59871153 91434853 1 11 137 0 5 0 0 6 0 0 7 0 0 7 4 5 8 4 6 12.33 34.71 65.19 0 3 2 Whitelist UCEC-US 2 0.54 0 0 0 0.07 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 16 330941 69341729 1 3 137 0 1 0 1 1 0.57 0.19 4 0 0.22 4 0 3 10 5 8 12.33 92.08 2.92 0 3 1 Whitelist UCEC-US 0.87 0.41 0 0.22 0.64 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 17 6238805 39771701 5 10 137 3 2 0 0 5 0.14 0 10 0 0 10 3 3 12 4 4 12.33 2.18 93.36 0 3 2 Whitelist UCEC-US 0.86 0 0 0 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 18 43465708 43901016 1 1 137 0 1 0 0 0 0.39 0.28 2 NA NA NA NA NA NA NA NA 12.33 0.56 99.41 0 2 3 Whitelist UCEC-US 0.62 0.52 NA NA 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 19 43899152 49881315 1 4 137 0 3 0 0 1 0.03 0 8 0 0 8 5 8 19 5 5 12.33 55.71 37.01 0 1 2 Whitelist UCEC-US 0.54 0 0 0 0.33 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 20 48004486 48304306 1 1 137 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 12.33 0.37 98.56 0 2 NA Whitelist UCEC-US 0.62 1 NA NA 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 21 NA NA 0 0 137 0 0 0 0 0 NA 0.69 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA 0.89 NA NA NA 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d 22 50838946 50985120 1 1 137 0 1 0 0 0 0.39 0 1 0 NA NA NA NA 11 5 8 12.33 20.03 79.35 0 4 NA Whitelist UCEC-US 0.62 0 0 NA 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::16e69011-c295-479f-b521-86e66fba498d X 117767558 117788086 1 1 137 0 1 0 0 0 0.39 0.33 2 0 NA NA NA NA 5 5 5 12.33 0.17 99.61 0 2 3 Whitelist UCEC-US 0.62 0.58 0 NA 0.59 0 No UCEC-US 16e69011-c295-479f-b521-86e66fba498d UCEC 0.49 2.05 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:2 2 UCEC-US DO43074 TCGA-D1-A16G 16e69011-c295-479f-b521-86e66fba498d female deceased C54.1 74 834 NA NA Included Uterus-AdenoCA UCEC US 1 27.43 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 1 8226155 101008007 1 13 152 1 3 1 0 8 0.28 0.76 9 0 0 9 8 9 10 8 9 78.35 100 0 1 4 6 Whitelist UCEC-US 10 0.62 0.93 0 0 0.59 1 Linked to high confidence UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA Before polyploidization 18 0.06 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 2 10354175 219349100 1 7 152 1 4 0 0 2 0.04 0.19 8 0 0 8 4 8 9 5 5 78.35 99.87 0.02 3 4 6 Whitelist UCEC-US 6 0.62 0.41 0 0 0.36 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 3 41357769 182883840 1 26 152 4 5 1 0 16 0.08 0 25 0 0 25 3 3 29 3 4 78.35 96.73 0.13 1 19 6 Whitelist UCEC-US 9 0.75 0 0 0 0.48 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 36 0.12 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 4 124373993 124584257 2 2 152 0 0 1 1 0 0.57 0.87 4 0 0 4 4 4 15 5 5 78.35 72.15 25.07 0 4 6 Whitelist UCEC-US 0.68 1 0 0 0.64 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 5 49865413 51054513 2 2 152 1 1 0 0 0 0.57 0.5 4 0 0 4 4 4 13 5 5 78.35 62.6 34.7 0 3 4 Whitelist UCEC-US 0.68 0.75 0 0 0.64 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 6 31561657 157440270 1 6 152 2 1 0 0 3 0.3 0.86 11 0 0 11 4 5 12 5 5 78.35 99.82 0 0 4 6 Whitelist UCEC-US 2 0.93 1 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 7 20135012 70259493 1 4 152 1 2 0 0 1 0.3 0.86 7 0 0 7 4 7 9 5 9 78.35 99.76 0 0 3 4 Whitelist UCEC-US 0.68 0.99 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 8 35370164 39691255 2 2 152 1 0 0 1 0 0.57 0.09 6 0 0 6 3 5 13 5 5 78.35 70.94 25.64 0 5 2 Whitelist UCEC-US 0.68 0.26 0 0 0.64 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 9 35254027 132948794 1 3 152 1 2 0 0 0 0.3 0.84 5 0 0 5 5 5 9 6 6 78.35 99.3 0 0 3 4 Whitelist UCEC-US 0.62 0.97 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 10 45492675 89934330 5 11 152 2 0 1 2 6 0.53 0 19 0 0 19 8 12 24 8 14 78.35 99.82 0 1 4 5 Whitelist UCEC-US 1_18 0.68 0.02 0 0 0.64 1 High confidence UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA With other complex events 16 0.05 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 11 65126741 118628711 1 3 152 0 3 0 0 0 0.03 0.17 5 0 0 5 5 5 5 5 5 78.35 0.38 99.06 0 2 4 Whitelist UCEC-US 0.41 0.39 0 0 0.33 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 12 105792482 128162002 2 4 152 0 1 0 1 2 0.57 0.44 7 0 0 7 5 7 16 9 9 78.35 82.31 17.61 0 2 4 Whitelist UCEC-US 4 0.68 0.69 0 0 0.64 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 13 NA NA 0 0 152 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 14 29259740 48963196 9 10 152 1 1 4 3 1 0.39 0 11 0 0 11 3 6 39 4 5 78.35 66.29 30.2 0 3 4 Whitelist UCEC-US 0.68 0 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 19 0.06 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 15 64279198 64322365 1 1 152 0 1 0 0 0 0.39 0.08 2 0 NA NA NA NA 9 6 9 78.35 17.35 82.57 0 2 4 Whitelist UCEC-US 0.62 0.22 0 NA 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 16 4789984 31958390 4 6 152 0 2 1 1 2 0.57 0.13 13 0 0 13 4 7 20 4 6 78.35 69.51 25.49 0 9 7 Whitelist UCEC-US 0.54 0.32 0 0 0.64 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 17 1065988 76317978 1 6 152 2 1 0 0 3 0.3 0.31 9 0 0 9 5 5 10 5 5 78.35 58.36 37.18 0 4 2 Whitelist UCEC-US 0.68 0.56 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 9 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 18 3979871 48656507 1 8 152 0 2 1 1 4 0.57 0.02 10 0 0 10 4 7 14 5 8 78.35 99.96 0 9 5 4 Whitelist UCEC-US 10 0.68 0.09 0 0 0.64 1 Linked to high confidence UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA With other complex events 12 0.04 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 19 3416864 32900797 1 5 152 2 1 0 0 2 0.3 0 9 0 0 9 4 5 13 5 6 78.35 84.83 14.99 0 4 5 Whitelist UCEC-US 0.45 0.02 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 20 32170380 32378123 1 1 152 1 0 0 0 0 0.39 0.39 2 NA NA NA NA NA 4 3 4 78.35 52.41 40.58 0 3 4 Whitelist UCEC-US 0.62 0.64 NA NA 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 21 NA NA 0 0 152 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 22 38704578 38882820 1 1 152 0 1 0 0 0 0.39 0.7 2 NA NA NA NA NA 4 3 3 78.35 81.33 18.67 0 4 7 Whitelist UCEC-US 0.62 0.9 NA NA 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::24118b8f-59fe-482a-aed3-7b1bde1571b7 X 16596122 32723512 1 4 152 1 2 0 0 1 0.3 0.46 4 0 0 4 3 4 7 3 3 78.35 96.03 0.2 0 3 2 Whitelist UCEC-US 0.68 0.7 0 0 0.59 1 No UCEC-US 24118b8f-59fe-482a-aed3-7b1bde1571b7 UCEC 0.65 3.57 Uterus-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7578479_A_G,CN:2 4 UCEC-US DO40831 TCGA-B5-A0K8 24118b8f-59fe-482a-aed3-7b1bde1571b7 female alive C54.1 71 NA 543 NA Included Uterus-AdenoCA UCEC US 0 17.86 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 1 151533947 151647934 3 3 345 1 2 0 0 0 0.3 0.02 3 0 0 NA NA NA 30 5 13 70.64 82.13 17.87 0 3 4 Whitelist UCEC-US 0.62 0.07 0 0 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 2 15685256 16120579 12 12 345 2 3 3 4 0 0.88 0 10 0 0 10 3 6 44 7 11 70.64 79.66 17.63 0 1 5 Whitelist UCEC-US 0.93 0 0 0 0.91 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 24 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 3 58382592 58523707 11 11 345 2 5 1 3 0 0.36 0 2 0 0 NA NA NA 27 7 12 70.64 96.76 0 0 4 6 Whitelist UCEC-US 0.62 0 0 0 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 22 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 4 82375629 82503741 1 1 345 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 5 5 5 70.64 0.12 99.66 0 2 3 Whitelist UCEC-US 0.62 0 0 NA 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 5 37844909 41807739 3 4 345 0 0 1 2 1 0.3 0.37 3 0 0 NA NA NA 17 5 9 70.64 99.86 0 0 4 5 Whitelist UCEC-US 0.54 0.62 0 0 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 6 159148983 159662078 3 3 345 0 1 1 1 0 0.8 0.07 3 0 0 NA NA NA 27 11 11 70.64 99.82 0 0 4 5 Whitelist UCEC-US 0.87 0.21 0 0 0.84 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 7 5430484 138728690 1 9 345 0 4 0 2 3 0.06 0.23 13 0 0 13 5 9 14 5 9 70.64 99.78 0 0 4 3 Whitelist UCEC-US 0.54 0.47 0 0 0.48 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 8 26429412 67331507 3 5 345 0 1 1 1 2 0.8 0.14 10 0 0 10 6 9 14 6 6 70.64 93.96 2.63 6 6 8 Whitelist UCEC-US 0.62 0.33 0 0 0.84 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 9 3706441 4911319 1 1 345 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 5 3 5 70.64 1.19 98.11 0 2 3 Whitelist UCEC-US 0.62 0.01 NA NA 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 10 106208772 106420852 2 2 345 0 1 1 0 0 0.57 0.05 2 0 0 NA NA NA 19 4 7 70.64 99.85 0.07 0 4 5 Whitelist UCEC-US 0.68 0.17 0 0 0.64 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 11 48091811 48162802 2 2 345 1 0 0 1 0 0.57 1 2 0 0 NA NA NA 13 7 7 70.64 99.44 0 0 4 5 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 12 NA NA 0 0 345 0 0 0 0 0 NA 0 NA NA NA NA NA NA 5 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA 0.01 NA NA NA 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 13 39097481 96104716 1 3 345 0 2 0 1 0 0.3 0.04 5 0 0 5 4 5 6 4 6 70.64 100 0 0 3 4 Whitelist UCEC-US 0.62 0.13 0 0 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 14 21119841 105479235 1 9 345 1 7 0 0 1 0 0.76 11 0 0 11 4 6 12 4 6 70.64 99.55 0.14 0 3 4 Whitelist UCEC-US 0.15 0.92 0 0 0.04 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 15 63564967 63919997 3 3 345 1 0 1 1 0 0.8 0 2 0 0 NA NA NA 13 5 5 70.64 24.38 75.62 0 3 4 Whitelist UCEC-US 0.87 0 0 0 0.84 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 16 30977678 85237503 1 15 345 0 4 2 0 9 0.06 0.04 12 0 0 12 5 11 14 5 11 70.64 1.61 98.27 0 2 3 Whitelist UCEC-US 0.13 0.14 0 0 0.48 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 17 15552988 20511725 2 2 345 0 2 0 0 0 0.11 0 5 0 0 5 3 3 28 8 8 70.64 52.24 43.31 0 6 4 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 18 74228679 74586934 1 4 345 0 1 0 0 3 0.39 0.4 2 0 0 NA NA NA 4 3 3 70.64 20.15 75.21 0 2 3 Whitelist UCEC-US 0.68 0.65 0 0 0.59 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 19 46536637 46823329 9 10 345 2 2 4 1 1 0.55 0 5 0 0 5 5 5 18 5 6 70.64 93.17 6.66 0 3 4 Whitelist UCEC-US 0.68 0 0 0 0.64 0 Low confidence UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA After polyploidization 19 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 20 33890842 34786327 2 4 345 1 1 0 0 2 0.57 0 5 0 0 5 3 5 13 6 7 70.64 92.33 0 0 3 4 Whitelist UCEC-US 0.62 0 0 0 0.64 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 21 NA NA 0 0 345 0 0 0 0 0 NA 0.46 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.7 NA NA NA 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be 22 43133787 46719957 1 3 345 0 1 1 1 0 0.8 0.8 3 0 0 NA NA NA NA NA NA 70.64 100 0 0 3 4 Whitelist UCEC-US 0.87 0.95 0 0 0.84 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b76cc9c-c379-43e4-9c3f-56197a3353be X NA NA 0 0 345 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0 NA NA NA 0 No UCEC-US 2b76cc9c-c379-43e4-9c3f-56197a3353be UCEC 0.62 3.14 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:2 3 UCEC-US DO42240 TCGA-BS-A0V8 2b76cc9c-c379-43e4-9c3f-56197a3353be female alive C54.1 68 NA 1507 NA Included Uterus-AdenoCA UCEC US 0 49.57 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 1 201300552 201726680 2 2 221 0 0 1 1 0 0.57 0.32 4 0 0 4 4 4 18 6 8 68.02 100 0 1 4 5 Whitelist UCEC-US 0.68 0.57 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 2 142056844 142125354 2 2 221 2 0 0 0 0 0.11 0.72 2 0 0 NA NA NA 38 5 7 68.02 99.45 0.45 0 3 5 Whitelist UCEC-US 0.54 0.9 0 0 0.48 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 3 8106463 172748817 1 12 221 5 6 0 1 0 0.03 0.79 18 0 0 18 4 14 18 4 7 68.02 96.32 0.54 2 4 3 Whitelist UCEC-US 0.45 0.94 0 0 0.36 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 24 0.05 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 4 106505975 146681881 4 4 221 1 0 2 1 0 0.57 0.89 8 0 0 8 5 7 25 5 6 68.02 33.53 64.1 0 2 3 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 5 55406655 175308957 9 11 221 4 3 2 0 2 0.27 0.26 13 0 0 13 5 7 15 5 7 68.02 34.41 65.48 15 2 4 Whitelist UCEC-US 0.74 0.51 0 0 0.59 0 Low confidence UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA With other complex events 20 0.05 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 6 20634315 162881159 1 9 221 5 4 0 0 0 0.03 0.26 16 0 0 16 4 6 19 5 7 68.02 96.59 0.02 0 4 3 Whitelist UCEC-US 0.41 0.5 0 0 0.33 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 18 0.04 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 7 11235646 55734459 4 4 221 0 2 1 1 0 0.57 0 32 0 0 32 3 5 60 4 7 68.02 33.46 63.47 7 8 3 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 8 29811228 120459407 1 11 221 2 4 0 1 4 0.17 0.36 15 0 0 15 5 7 16 5 7 68.02 96.58 0 1 6 5 Whitelist UCEC-US 0.62 0.61 0 0 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 18 0.04 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 9 2725445 33354428 4 5 221 2 2 0 0 1 0.26 0.08 13 0 0 13 9 9 21 11 11 68.02 5.6 91.29 1 2 1 Whitelist UCEC-US 0.68 0.23 0 0 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 9 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 10 45098164 79551331 1 2 221 1 1 0 0 0 0.57 0 5 NA 0 5 3 5 7 3 4 68.02 84.25 15.57 0 4 2 Whitelist UCEC-US 0.68 0.02 NA 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 11 91278065 125249271 2 4 221 2 1 1 0 0 0.57 0.08 7 0 0 7 5 7 17 5 7 68.02 85.71 10.09 1 3 2 Whitelist UCEC-US 0.68 0.22 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 12 50421286 99547527 1 4 221 3 1 0 0 0 0.11 0.11 6 0 0 6 5 6 7 5 5 68.02 99.52 0.4 0 3 2 Whitelist UCEC-US 0.54 0.28 0 0 0.48 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 13 21722488 75727846 1 4 221 1 2 0 0 1 0.3 0.71 6 0 0 6 3 4 7 3 5 68.02 99.63 0.37 0 3 2 Whitelist UCEC-US 0.68 0.9 0 0 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 7 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 14 25471508 73849795 1 6 221 3 3 0 0 0 0.11 0.85 9 0 0 9 5 7 9 5 5 68.02 0.6 98.49 0 2 1 Whitelist UCEC-US 0.54 0.98 0 0 0.48 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 12 0.03 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 15 35294919 35414313 1 1 221 0 1 0 0 0 0.39 0.84 1 0 NA NA NA NA 6 3 4 68.02 99.87 0 0 3 NA Whitelist UCEC-US 0.62 0.97 0 NA 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 2 0 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 16 3581151 33559846 1 6 221 1 1 0 0 4 0.57 0.4 7 0 0 7 0 4 14 3 5 68.02 52.11 43.43 1 1 4 Whitelist UCEC-US 0.54 0.64 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 17 465941 71614284 1 6 221 0 2 0 0 4 0.11 1 9 0.08 0.01 9 3 9 10 4 4 68.02 62.69 37.31 1 4 2 Whitelist UCEC-US 0.68 1 0.08 0.01 0.48 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 8 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 18 27130024 72366332 1 4 221 0 2 1 0 1 0.3 0.84 5 0 0 5 5 5 9 6 6 68.02 99.96 0 0 3 4 Whitelist UCEC-US 0.68 0.97 0 0 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 7 0.02 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 19 28125311 37999533 5 7 221 2 0 1 2 2 0.53 0 18 0 0 18 4 5 31 4 5 68.02 74.12 18.6 0 5 8 Whitelist UCEC-US 0.62 0 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 12 0.03 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 20 15337108 43402722 1 2 221 1 0 0 1 0 0.57 0.82 4 0 0 4 0 4 6 3 6 68.02 93.56 0 0 5 4 Whitelist UCEC-US 0.68 0.96 0 0 0.64 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 4 0.01 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 21 NA NA 0 0 221 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 0 0 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 22 30273860 38488823 1 3 221 0 2 0 0 1 0.11 0.75 5 NA 0 5 4 5 7 4 4 68.02 49.99 38.9 0 2 3 Whitelist UCEC-US 0.62 0.92 NA 0 0.48 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 5 0.01 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::2b865f8c-539f-4cb2-8f08-41709e9511e5 X 6944118 99048474 1 8 221 3 1 0 1 3 0.28 0.44 13 0 0 13 4 7 14 5 5 68.02 22.66 77.12 0 2 1 Whitelist UCEC-US 0.87 0.69 0 0 0.59 0 No UCEC-US 2b865f8c-539f-4cb2-8f08-41709e9511e5 UCEC 0.7 3.19 Uterus-AdenoCA NA 13 0.03 stopgain,17_7576855_A_G,CN:2 3 UCEC-US DO40806 TCGA-BK-A0CC 2b865f8c-539f-4cb2-8f08-41709e9511e5 female alive C54.1 69 NA 212 NA Included Uterus-AdenoCA UCEC US 0 6.97 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 1 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 2 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 3 66325786 66899301 1 1 1 1 0 0 0 0 0.39 0.07 1 NA NA NA NA NA NA NA NA 3.37 0 99.95 0 2 NA Whitelist UCEC-US 0.62 0.21 NA NA 0.59 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 2 1 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 4 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 5 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 6 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 7 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 8 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 9 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 10 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 11 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 12 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 13 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 14 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 15 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 16 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 17 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 18 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 19 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 20 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 21 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc 22 NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::45d58088-d3f4-4eb0-b75c-bcb98c0981dc X NA NA 0 0 1 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 45d58088-d3f4-4eb0-b75c-bcb98c0981dc UCEC 0.87 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42304 TCGA-A5-A0G9 45d58088-d3f4-4eb0-b75c-bcb98c0981dc female alive C54.1 79 NA 2165 NA Included Uterus-AdenoCA UCEC US 0 71.22 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 1 6048700 223298663 1 20 166 4 9 1 0 6 0 0.01 32 0 0 32 9 20 33 9 13 23.12 4.09 95.91 0 2 3 Whitelist UCEC-US 3 0.21 0.06 0 0 0.1 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 34 0.1 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 2 11646205 219855353 1 18 166 6 4 1 0 7 0.04 0.01 26 0 0 26 8 20 26 8 8 23.12 14.18 85.72 6 2 3 Whitelist UCEC-US 11 0.41 0.05 0 0 0.41 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 29 0.09 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 3 49839243 138399026 2 5 166 0 1 1 0 3 0.57 0.13 10 0 0 10 10 10 22 12 12 23.12 15.97 84.02 0 2 3 Whitelist UCEC-US 1 0.93 0.31 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 7 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 4 20587384 20645628 3 3 166 1 0 1 1 0 0.8 0.76 3 0 0 NA NA NA 9 3 3 23.12 0.65 99.15 0 2 1 Whitelist UCEC-US 0.87 0.92 0 0 0.84 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 6 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 5 55342579 133013661 3 6 166 1 0 0 2 3 0.3 0.42 8 0 0 8 5 8 19 8 8 23.12 3.51 96.37 0 2 3 Whitelist UCEC-US 8 0.62 0.67 0 0 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 9 0.03 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 6 88090022 168929814 1 3 166 0 3 0 0 0 0.03 0.02 4 0 0 4 4 4 5 5 5 23.12 0.76 99.11 0 2 3 Whitelist UCEC-US 0.41 0.08 0 0 0.33 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 6 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 7 72720792 76328064 1 2 166 1 1 0 0 0 0.57 0.39 4 0 0 4 3 4 9 5 5 23.12 1.26 98.5 0 2 1 Whitelist UCEC-US 0.68 0.64 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 4 0.01 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 8 8378003 120508159 1 9 166 0 2 1 0 6 0.3 0.59 7 0 0 7 7 7 7 7 7 23.12 1.1 98.89 0 2 3 Whitelist UCEC-US 5 0.62 0.81 0 0 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 12 0.04 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 9 97425444 129663486 2 2 166 0 0 1 1 0 0.57 1 3 0 0 NA NA NA 10 8 8 23.12 71.9 27.4 0 1 2 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 4 0.01 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 10 89617310 90758263 1 1 166 1 0 0 0 0 0.39 0.09 2 NA NA NA NA NA 4 3 3 23.12 45.54 54.28 0 0 1 Whitelist UCEC-US 0.62 0.26 NA NA 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 2 0.01 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 11 34271481 118689779 1 5 166 1 2 0 0 2 0.3 0.71 6 0 0 6 6 6 8 7 7 23.12 11.99 87.59 0 2 3 Whitelist UCEC-US 2 0.62 0.9 0 0 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 8 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 12 24684514 121075306 4 8 166 0 2 2 0 4 0.26 0.04 13 0 0 13 5 9 18 5 10 23.12 40.41 55.85 0 2 3 Whitelist UCEC-US 0.62 0.14 0 0 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 12 0.04 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 13 45435405 49607611 1 4 166 1 1 0 0 2 0.57 0.67 4 0 0 4 4 4 5 5 5 23.12 58.49 41.37 0 1 2 Whitelist UCEC-US 12 0.68 0.87 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 6 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 14 92757824 97590164 2 2 166 0 2 0 0 0 0.11 0.65 4 0 0 4 3 4 7 3 3 23.12 4.58 94.5 0 3 2 Whitelist UCEC-US 0.54 0.86 0 0 0.48 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 4 0.01 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 15 59365378 86262293 1 6 166 2 2 0 0 2 0.26 0.01 8 0 0 8 3 8 13 3 6 23.12 97.76 2.11 0 3 2 Whitelist UCEC-US 0.62 0.03 0 0 0.59 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 10 0.03 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 16 54007745 68771105 1 2 166 0 2 0 0 0 0.11 0.34 3 NA 0 NA NA NA 4 4 4 23.12 56.45 38.42 0 1 2 Whitelist UCEC-US 0.54 0.59 NA 0 0.48 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 4 0.01 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 17 37709860 38631265 2 5 166 0 2 0 0 3 0.11 0 4 0 0 4 3 4 15 5 5 23.12 52.08 42.41 0 2 1 Whitelist UCEC-US 0.68 0 0 0 0.48 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 7 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 18 NA NA 0 0 166 0 0 0 0 0 NA 0.63 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.85 NA NA NA 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 0 0 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 19 49851013 51440615 1 5 166 0 1 1 0 3 0.57 0.01 6 0 0 6 3 5 8 3 4 23.12 40.02 59.81 0 2 4 Whitelist UCEC-US 0.93 0.03 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 7 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 20 19594123 35276741 1 6 166 0 2 0 0 4 0.11 0.01 7 0 0 7 3 7 9 3 5 23.12 5.31 93.71 0 2 3 Whitelist UCEC-US 2 0.93 0.05 0 0 0.48 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 8 0.02 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 21 NA NA 0 0 166 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 0 0 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 22 22169942 37258010 1 6 166 1 2 1 0 2 0.57 0 10 0 0 10 5 10 12 6 6 23.12 62.34 37.66 0 1 2 Whitelist UCEC-US 0.93 0.01 0 0 0.64 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 10 0.03 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5c22c8d6-5805-455c-8e1c-e6b8006738e4 X NA NA 0 0 166 0 0 0 0 0 NA 0 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.02 NA NA NA 0 No UCEC-US 5c22c8d6-5805-455c-8e1c-e6b8006738e4 UCEC 0.87 1.88 Uterus-AdenoCA NA 0 0 frameshift_deletion,17_7578429_-_C,CN:2 2 UCEC-US DO42937 TCGA-D1-A17K 5c22c8d6-5805-455c-8e1c-e6b8006738e4 female alive C54.1 74 NA 429 NA Included Uterus-AdenoCA UCEC US 0 14.11 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 1 28341839 227204991 1 14 235 1 4 1 1 7 0.28 0.47 19 0 0 19 4 9 22 7 12 63.79 83.42 16.58 0 3 2 Whitelist UCEC-US 0.62 0.71 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 21 0.04 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 2 33340408 187263193 1 7 235 5 0 0 0 2 0 0.13 10 0 0 10 4 10 15 4 5 63.79 99.38 0.53 0 2 3 Whitelist UCEC-US 0.13 0.32 0 0 0.07 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 12 0.03 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 3 84386548 84521775 2 2 235 0 0 1 1 0 0.57 0.2 3 0 0 NA NA NA 18 5 5 63.79 96.51 0.35 0 3 2 Whitelist UCEC-US 0.68 0.42 0 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 4 2076880 103656376 1 4 235 2 2 0 0 0 0.26 0 8 0 0 8 5 8 9 5 5 63.79 0.65 99.16 0 2 1 Whitelist UCEC-US 0.62 0 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 8 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 5 20380181 20612251 2 2 235 2 0 0 0 0 0.11 1 3 0 0 NA NA NA 23 5 11 63.79 97.27 0.06 0 3 4 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 6 34168302 162624466 1 11 235 3 4 0 0 4 0.06 1 18 0 0 18 7 10 19 7 11 63.79 34.93 61.89 1 3 2 Whitelist UCEC-US 7 0.62 1 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 18 0.04 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 7 5548182 122572516 1 10 235 3 3 0 1 3 0.28 0.66 20 0 0 20 7 11 23 7 8 63.79 63.89 35.88 0 4 3 Whitelist UCEC-US 6 0.68 0.87 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 17 0.04 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 8 48224400 112912235 1 6 235 2 2 0 0 2 0.26 0.66 9 0 0 9 4 9 19 4 4 63.79 73.31 23.27 0 2 3 Whitelist UCEC-US 0.62 0.87 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 10 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 9 17916186 29054809 2 4 235 2 0 1 1 0 0.57 0.31 12 0 0 12 7 9 21 8 8 63.79 49.73 50.16 0 3 4 Whitelist UCEC-US 0.68 0.56 0 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 8 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 10 24604441 75878008 1 2 235 1 1 0 0 0 0.57 0.01 4 0.01 0 4 3 4 5 3 3 63.79 99.77 0.05 0 3 2 Whitelist UCEC-US 0.68 0.05 0.01 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 11 100011760 129373898 4 5 235 1 2 0 1 1 0.57 0.02 6 0 0 6 6 6 28 12 12 63.79 74.3 22.07 0 2 3 Whitelist UCEC-US 0.93 0.08 0 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 9 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 12 6729293 60718006 1 8 235 3 1 0 0 4 0.11 0.64 13 0 0 13 5 5 14 5 5 63.79 91.14 5.19 0 5 3 Whitelist UCEC-US 0.62 0.85 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 12 0.03 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 13 84055725 87121370 1 2 235 2 0 0 0 0 0.11 0.07 4 0 0 4 4 4 5 5 5 63.79 0.98 99.02 0 1 2 Whitelist UCEC-US 0.54 0.21 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 14 32511170 76298089 1 6 235 2 2 0 0 2 0.26 1 12 0 0 12 6 10 13 7 7 63.79 98.54 0.54 0 3 2 Whitelist UCEC-US 0.62 1 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 10 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 15 91295471 91471047 2 2 235 1 1 0 0 0 0.57 0.32 4 0 0 4 0 3 16 5 10 63.79 43.53 51.59 0 3 5 Whitelist UCEC-US 0.68 0.57 0 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 16 3871176 69309478 1 5 235 3 1 0 0 1 0.11 0.04 12 0 0 12 3 4 15 3 3 63.79 39.11 60.8 0 2 1 Whitelist UCEC-US 0.45 0.13 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 9 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 17 70402987 70513984 2 2 235 2 0 0 0 0 0.11 0 4 0 0 4 3 4 28 6 6 63.79 68.02 27.53 0 3 2 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 18 19615029 51581563 3 3 235 1 2 0 0 0 0.3 0.15 6 0 0 6 4 6 12 4 4 63.79 72.59 21.98 0 4 3 Whitelist UCEC-US 0.62 0.35 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 6 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 19 38699460 40106367 5 6 235 1 0 2 2 1 0.53 0 9 0 0 9 3 5 66 5 5 63.79 78.01 21.81 3 47 80 Whitelist UCEC-US 0.93 0 0 0 0.64 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 11 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 20 2892972 58139340 1 8 235 0 3 0 0 5 0.03 0.17 11 0 0 11 8 11 12 8 11 63.79 99.03 0 0 6 4 Whitelist UCEC-US 0.87 0.39 0 0 0.33 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 11 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 21 23339273 39056754 1 6 235 2 1 0 0 3 0.3 0.01 7 0 0 7 4 7 10 5 5 63.79 75.8 1.56 0 2 3 Whitelist UCEC-US 0.54 0.04 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 9 0.02 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 22 29158160 42429509 1 2 235 0 2 0 0 0 0.11 0.76 4 0 0 4 4 4 7 5 5 63.79 1.75 98.25 0 2 3 Whitelist UCEC-US 0.54 0.93 0 0 0.48 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 X 5818648 153949132 1 9 235 4 3 0 1 1 0.17 1 14 0 0 14 3 7 15 3 7 63.79 27.13 72.64 0 2 3 Whitelist UCEC-US 0.62 1 0 0 0.59 0 No UCEC-US 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 UCEC 0.71 3.06 Uterus-AdenoCA NA 17 0.04 NA 3 UCEC-US DO43859 TCGA-B5-A1MY 5d2f1a0f-a01b-48c2-b749-1ca710aa2bb4 female deceased C54.1 62 361 NA NA Included Uterus-AdenoCA UCEC US 1 11.88 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 1 27159190 205824002 2 3 137 0 1 1 0 1 0.57 0.04 21 0 0 21 5 5 37 7 8 74.13 97.49 2.51 0 4 5 Whitelist UCEC-US 0.62 0.13 0 0 0.64 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 2 8690448 85931482 1 5 137 1 2 0 0 2 0.3 0.35 10 0 0 10 6 10 16 7 11 74.13 99.98 0 0 3 5 Whitelist UCEC-US 0.93 0.61 0 0 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 3 1194265 187948184 1 11 137 2 2 1 1 5 0.88 0.13 60 0 0 60 6 10 65 6 10 74.13 96.16 0.78 0 6 4 Whitelist UCEC-US 0.62 0.33 0 0 0.91 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 17 0.06 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 4 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 5 NA NA 0 0 137 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 6 31236009 152789893 1 8 137 0 2 1 1 4 0.57 0.72 15 0 0 15 3 4 20 3 4 74.13 97.07 0 0 3 4 Whitelist UCEC-US 1 0.87 0.9 0 0 0.64 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 12 0.04 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 7 33023335 53917686 13 20 137 3 3 2 5 7 0.69 0 24 0 0 24 5 5 39 5 7 74.13 79.47 20.33 0 4 3 Whitelist UCEC-US 0.91 0 0 0 0.77 0 Low confidence UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA With other complex events 33 0.12 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 8 29249771 38952996 2 2 137 0 1 0 1 0 0.57 0.43 10 0 0 10 0 3 83 6 12 74.13 95.96 0 0 4 5 Whitelist UCEC-US 0.68 0.68 0 0 0.64 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 9 20877875 21577863 2 2 137 0 0 1 1 0 0.57 0.5 2 0 0 NA NA NA 15 5 5 74.13 57.89 42.11 0 2 4 Whitelist UCEC-US 0.68 0.75 0 0 0.64 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 10 104871413 105162900 1 1 137 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA NA NA NA 74.13 0.22 99.58 0 2 3 Whitelist UCEC-US 0.62 0.45 NA NA 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 11 14248536 120776204 1 11 137 0 4 1 0 6 0.04 0.01 24 0 0 24 4 7 29 4 10 74.13 95.7 1.13 0 4 5 Whitelist UCEC-US 2 0.54 0.06 0 0 0.36 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 12 52302748 122651666 3 3 137 0 2 0 1 0 0.3 0.42 6 0 0 6 3 4 14 3 5 74.13 96.23 0.03 0 5 3 Whitelist UCEC-US 0.62 0.67 0 0 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 13 91425093 94722045 1 2 137 1 1 0 0 0 0.57 0.34 6 NA 0 6 5 6 10 5 8 74.13 32.38 67.62 0 2 4 Whitelist UCEC-US 0.68 0.59 NA 0 0.64 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 14 NA NA 0 0 137 0 0 0 0 0 NA 0 NA 0 NA NA NA NA 15 3 5 0 0 0 0 0 0 Whitelist UCEC-US NA 0.01 0 NA NA 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 15 75096050 75149519 1 1 137 0 1 0 0 0 0.39 0.19 1 NA NA NA NA NA NA NA NA 74.13 99.9 0 0 3 NA Whitelist UCEC-US 0.62 0.41 NA NA 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 16 56856280 57176795 1 1 137 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA 7 3 5 74.13 95.19 0 0 4 6 Whitelist UCEC-US 0.62 0.81 NA NA 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 17 27098682 73779255 1 6 137 1 3 0 0 2 0.11 0.01 8 0 0 8 3 5 10 4 5 74.13 30.24 63.4 0 2 3 Whitelist UCEC-US 0.54 0.06 0 0 0.48 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 18 NA NA 0 0 137 0 0 0 0 0 NA 1 NA NA NA NA NA NA 13 4 6 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 19 9690317 14530624 5 13 137 1 2 1 1 8 0.9 0 5 0 0 5 0 4 10 4 6 74.13 62.1 29.78 0 3 2 Whitelist UCEC-US 7 0.8 0 0 0 0.92 0 Linked to low confidence UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA With other complex events 18 0.07 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 20 31037050 49278489 1 4 137 0 3 0 0 1 0.03 0.54 6 0 0 6 4 6 7 4 5 74.13 99.86 0 0 5 6 Whitelist UCEC-US 0.21 0.77 0 0 0.33 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 21 NA NA 0 0 137 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f 22 29529538 29813200 1 1 137 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA 7 5 6 74.13 48.21 40.68 0 3 4 Whitelist UCEC-US 0.62 0.46 NA NA 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f X 10983160 64652687 1 3 137 1 2 0 0 0 0.3 0.56 5 0 0 5 0 4 8 3 4 74.13 17.42 79.43 0 2 3 Whitelist UCEC-US 0.62 0.79 0 0 0.59 0 No UCEC-US 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f UCEC 0.79 3.24 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577566_C_T,CN:3 3 UCEC-US DO43739 TCGA-BS-A0U9 5ffa2ec6-2d94-4b09-8fb9-3591cf38fa4f female alive C54.1 59 NA 1749 NA Included Uterus-AdenoCA UCEC US 0 57.53 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 1 NA NA 0 0 45 0 0 0 0 0 NA 0.58 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.8 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 2 125409745 125478375 2 2 45 0 0 1 1 0 0.57 0.27 2 0 0 NA NA NA 6 4 4 45.79 56.78 43.1 0 1 2 Whitelist UCEC-US 0.68 0.51 0 0 0.64 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 3 175475866 175736530 1 1 45 0 1 0 0 0 0.39 0.24 2 0 0 NA NA NA 5 3 3 45.79 70.61 29.26 0 4 5 Whitelist UCEC-US 0.62 0.48 0 0 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 4 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 5 59222917 59311510 1 1 45 1 0 0 0 0 0.39 0.53 2 NA NA NA NA NA NA NA NA 45.79 0.05 99.83 0 1 2 Whitelist UCEC-US 0.62 0.76 NA NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 6 NA NA 0 0 45 0 0 0 0 0 NA 0.52 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.76 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 7 4882581 104729935 1 3 45 1 2 0 0 0 0.3 0.73 7 0.01 0 7 6 7 8 6 8 45.79 16.72 83.06 0 2 3 Whitelist UCEC-US 0.62 0.91 0.01 0 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 6 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 8 71434055 129661833 1 2 45 1 1 0 0 0 0.57 0.5 2 0 0 NA NA NA 4 3 3 45.79 23.12 76.87 0 1 2 Whitelist UCEC-US 0.68 0.74 0 0 0.64 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 9 NA NA 0 0 45 0 0 0 0 0 NA 0.7 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.89 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 10 NA NA 0 0 45 0 0 0 0 0 NA 0.72 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.9 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 11 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 12 4216134 99332454 1 6 45 2 1 0 0 3 0.3 0 4 0 0 4 3 4 5 4 4 45.79 29.35 70.56 0 2 1 Whitelist UCEC-US 0.54 0.02 0 0 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 9 0.1 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 13 48907572 50006573 1 1 45 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 45.79 100 0 0 0 1 Whitelist UCEC-US 0.62 1 NA NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 14 72807246 73162993 1 2 45 0 0 0 1 1 0.39 0.05 1 0 NA NA NA NA NA NA NA 45.79 67.82 31.26 0 2 NA Whitelist UCEC-US 0.54 0.17 0 NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 3 0.03 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 15 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 16 72788358 72921281 1 1 45 0 1 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 45.79 99.32 0.55 0 1 NA Whitelist UCEC-US 0.62 1 NA NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 17 NA NA 0 0 45 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 18 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 19 45174367 45280827 1 1 45 0 1 0 0 0 0.39 0.22 2 NA NA NA NA NA 5 5 5 45.79 98.95 0.87 0 1 2 Whitelist UCEC-US 0.62 0.45 NA NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 20 15041348 15534190 2 2 45 1 1 0 0 0 0.57 0 4 0 0 4 4 4 7 5 5 45.79 0.95 98.06 0 1 2 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 4 0.04 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 21 NA NA 0 0 45 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 22 29215244 29464404 1 1 45 1 0 0 0 0 0.39 0.42 2 NA NA NA NA NA NA NA NA 45.79 100 0 0 0 1 Whitelist UCEC-US 0.62 0.66 NA NA 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 2 0.02 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::66e305ca-8a16-44f0-b837-85e529b7ad55 X 32055489 32984555 1 3 45 1 2 0 0 0 0.3 0.5 6 0 0 6 3 6 7 3 3 45.79 99.47 0.31 0 1 2 Whitelist UCEC-US 0.62 0.74 0 0 0.59 0 No UCEC-US 66e305ca-8a16-44f0-b837-85e529b7ad55 UCEC 0.86 1.61 Uterus-AdenoCA NA 6 0.07 nonsynonymous_SNV,17_7578190_C_T,CN:1 2 UCEC-US DO42464 TCGA-BG-A18C 66e305ca-8a16-44f0-b837-85e529b7ad55 female alive C54.1 72 NA 169 NA Included Uterus-AdenoCA UCEC US 0 5.56 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 1 54723498 244586486 11 19 409 2 3 3 3 8 0.97 0.02 54 0 0 54 5 6 57 5 6 66.8 70.96 28.67 0 2 3 Whitelist UCEC-US 0.62 0.07 0 0 0.98 0 Low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 30 0.04 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 2 20024112 213236791 1 19 409 5 6 0 0 8 0.01 0.03 24 0 0 24 5 6 25 5 7 66.8 95.93 3.96 6 3 4 Whitelist UCEC-US 7 0.62 0.1 0 0 0.2 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 30 0.04 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 3 1139885 193824811 1 18 409 1 9 0 0 8 0 0.44 33 0 0 33 4 7 35 4 5 66.8 96.72 0.08 13 3 4 Whitelist UCEC-US 1 0.21 0.69 0 0 0.01 0 Linked to low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 28 0.03 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 4 20426835 165790449 1 13 409 3 4 0 0 6 0.06 0.01 15 0 0 15 4 6 16 4 6 66.8 6.7 90.9 4 2 3 Whitelist UCEC-US 0.54 0.06 0 0 0.48 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 20 0.02 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 5 1568362 164256051 1 18 409 2 10 2 1 3 0 0.54 21 0 0 21 8 10 22 8 15 66.8 73.38 23.94 3 3 2 Whitelist UCEC-US 0.41 0.77 0 0 0.09 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 33 0.04 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 6 101518828 135926443 29 35 409 5 8 8 8 6 0.82 0 41 0 0 41 4 5 76 6 11 66.8 95.43 4.31 5 6 4 Whitelist UCEC-US 17 0.94 0 0 0 0.86 0 Low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 64 0.08 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 7 66676167 140933719 3 8 409 1 0 1 1 5 0.8 0.51 18 0 0 18 5 10 33 5 10 66.8 49.06 48.11 4 5 7 Whitelist UCEC-US 2 0.87 0.75 0 0 0.84 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 8 126280423 138629562 17 19 409 4 5 3 5 2 0.89 0 16 0 0 16 5 11 55 8 12 66.8 75.29 21.17 2 3 4 Whitelist UCEC-US 1 0 0 0 0.92 0 Low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 36 0.04 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 9 28588999 136891208 1 6 409 2 3 0 1 0 0.34 0.01 11 0 0 11 3 10 12 3 3 66.8 70.55 29.42 1 3 2 Whitelist UCEC-US 0.62 0.03 0 0 0.59 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 10 19695492 133265283 1 13 409 0 7 1 1 4 0 0.29 20 0 0 20 6 8 28 6 8 66.8 56.69 39.92 4 2 3 Whitelist UCEC-US 0.15 0.53 0 0 0.11 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 22 0.03 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 11 74099931 74753977 9 10 409 2 3 1 3 1 0.75 0.81 4 0 0 4 0 3 20 5 8 66.8 36.41 60.06 0 2 3 Whitelist UCEC-US 0.68 0.96 0 0 0.83 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 19 0.02 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 12 1493299 26945675 2 9 409 2 0 0 0 7 0.11 0 7 0 0 7 3 3 29 5 7 66.8 91.51 4.75 5 3 4 Whitelist UCEC-US 0.62 0.03 0 0 0.48 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 13 60345895 113978519 1 12 409 2 5 0 2 3 0.13 0.59 18 0 0 18 6 6 22 6 6 66.8 83.93 15.59 2 4 3 Whitelist UCEC-US 0.62 0.81 0 0 0.55 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 14 32429565 93244905 1 6 409 2 2 0 0 2 0.26 0.05 11 0 0 11 3 7 13 3 3 66.8 99.24 0.56 1 3 2 Whitelist UCEC-US 1 0.93 0.16 0 0 0.59 0 Linked to low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 10 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 15 22868349 99351648 1 6 409 1 1 1 0 3 0.8 0.13 7 0 0 7 4 4 8 4 4 66.8 86.92 8.13 0 2 3 Whitelist UCEC-US 0.93 0.32 0 0 0.84 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 16 85201715 86590532 2 2 409 0 1 1 0 0 0.57 1 3 0 0 NA NA NA 11 4 6 66.8 40.51 54.03 0 2 3 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 4 0 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 17 6570159 79796838 1 10 409 1 5 0 0 4 0.01 0.76 13 0 0 13 8 13 13 8 8 66.8 99.74 0.26 7 3 4 Whitelist UCEC-US 0.54 0.92 0 0 0.19 0 Linked to low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA After polyploidization 16 0.02 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 18 3340758 60994654 1 5 409 0 4 1 0 0 0.04 0.28 8 0 0 8 3 6 9 4 5 66.8 46.84 53.12 2 2 4 Whitelist UCEC-US 0.45 0.53 0 0 0.36 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 19 1161814 57249555 1 23 409 5 5 2 1 10 0.27 0 22 0 0 22 3 5 22 3 5 66.8 73.24 18.56 4 3 8 Whitelist UCEC-US 2_8 0.9 0 0 0 0.59 0 Linked to low confidence UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA With other complex events 36 0.04 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 20 7795432 30604331 1 6 409 1 2 2 0 1 0.53 0.86 10 0 0 10 3 5 13 3 5 66.8 93.71 0 0 5 4 Whitelist UCEC-US 0.62 1 0 0 0.64 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 11 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 21 33969097 34370202 1 1 409 0 1 0 0 0 0.39 0.65 2 0 NA NA NA NA 12 3 4 66.8 31.95 45.4 0 4 5 Whitelist UCEC-US 0.62 0.86 0 NA 0.59 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b 22 19301360 51089440 1 6 409 2 2 0 0 2 0.26 0.35 13 0 0 13 4 5 14 4 5 66.8 85.35 3.12 1 3 4 Whitelist UCEC-US 10 0.54 0.6 0 0 0.59 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::748e38b1-2ead-4a0a-8881-d640617b856b X 63986880 109247333 1 1 409 1 0 0 0 0 0.39 0.01 2 0 0 NA NA NA 5 3 3 66.8 26.21 73.79 0 2 7 Whitelist UCEC-US 0.62 0.06 0 0 0.59 0 No UCEC-US 748e38b1-2ead-4a0a-8881-d640617b856b UCEC 0.38 3.43 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577121_T_G,CN:4 3 UCEC-US DO43610 TCGA-AP-A0LF 748e38b1-2ead-4a0a-8881-d640617b856b female alive C54.1 82 NA 2859 NA Included Uterus-AdenoCA UCEC US 0 94.05 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 1 180845445 225858470 2 5 794 2 0 0 0 3 0.11 0.01 7 0 0 7 5 7 48 10 19 19.64 10.47 89.53 0 2 1 Whitelist UCEC-US 0.62 0.05 0 0 0.48 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 7 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 2 113395022 114806585 2 2 794 0 2 0 0 0 0.11 0.7 3 0 0 NA NA NA 35 7 8 19.64 8.47 91.43 0 2 3 Whitelist UCEC-US 0.54 0.9 0 0 0.48 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 3 13693655 180270905 1 24 794 1 12 0 1 10 0 0.49 27 0 0 27 8 9 31 8 9 19.64 73.05 23.78 1 1 2 Whitelist UCEC-US 11_19_7 0.12 0.73 0 0 0 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 38 0.02 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 4 110170907 110831959 2 2 794 0 2 0 0 0 0.11 0.23 3 0 0 NA NA NA 18 7 9 19.64 1.67 98.12 0 2 3 Whitelist UCEC-US 0.54 0.46 0 0 0.48 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 5 6488905 150088301 1 5 794 0 4 1 0 0 0.04 0.83 9 0 0 9 7 9 10 7 10 19.64 3.13 96.73 0 2 3 Whitelist UCEC-US 0.45 0.97 0 0 0.36 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 6 37553990 112204416 2 6 794 0 5 1 0 0 0.01 0.26 14 0 0 14 4 6 30 4 6 19.64 3.14 96.72 0 2 3 Whitelist UCEC-US 0.25 0.51 0 0 0.19 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 12 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 7 73691686 129774950 1 13 794 2 5 0 0 6 0.02 0.11 16 0 0 16 8 9 27 10 10 19.64 2.11 97.67 0 2 3 Whitelist UCEC-US 3 0.8 0.29 0 0 0.33 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 20 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 8 102128841 121239863 2 2 794 0 0 1 1 0 0.57 1 6 0 0 6 6 6 13 10 10 19.64 1.38 98.54 0 2 3 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 9 114926713 140728121 3 13 794 2 3 1 0 7 0.34 0.27 12 0 0 12 6 6 24 6 6 19.64 18.97 80.66 0 2 1 Whitelist UCEC-US 10_21 0.68 0.51 0 0 0.59 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 19 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 10 29978806 122169417 1 11 794 0 4 1 1 5 0.11 0.67 15 0 0 15 9 14 18 9 9 19.64 1.55 98.17 0 3 2 Whitelist UCEC-US 0.68 0.87 0 0 0.48 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 17 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 11 16783246 34780803 3 4 794 1 0 1 1 1 0.8 0.67 7 0 0 7 5 5 28 8 10 19.64 74.4 25.18 0 2 3 Whitelist UCEC-US 0.68 0.88 0 0 0.84 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 7 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 12 47540819 49659157 5 5 794 2 2 1 0 0 0.53 0.87 5 0 0 5 5 5 26 11 11 19.64 24.71 71.55 0 2 3 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 13 33451969 33538587 1 1 794 0 1 0 0 0 0.39 0 2 0 NA NA NA NA NA NA NA 19.64 0.08 99.92 0 2 3 Whitelist UCEC-US 0.62 0.01 0 NA 0.59 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 14 76853591 77443862 3 4 794 0 1 1 1 1 0.8 0.76 7 0 0 7 0 5 13 5 5 19.64 46.6 52.49 0 3 2 Whitelist UCEC-US 0.68 0.93 0 0 0.84 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 7 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 15 67057309 67397130 1 1 794 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 11 7 10 19.64 93.85 1.27 0 1 2 Whitelist UCEC-US 0.62 0 0 NA 0.59 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 16 166818 89759785 1 18 794 2 6 0 0 10 0.01 0.01 19 0 0 19 18 19 20 19 19 19.64 19.35 79.86 0 2 3 Whitelist UCEC-US 3_7 0.68 0.03 0 0 0.16 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 26 0.02 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 17 7101046 80011712 8 22 794 3 2 2 1 14 0.8 0 32 0 0 32 4 10 35 4 10 19.64 46.94 52.95 0 2 3 Whitelist UCEC-US 11_12_19 0.68 0 0 0 0.84 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 30 0.02 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 18 2712230 3154852 3 3 794 0 1 1 1 0 0.8 0.19 4 0 0 4 3 4 7 4 4 19.64 1.05 98.92 0 3 2 Whitelist UCEC-US 0.87 0.41 0 0 0.84 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 6 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 19 4689511 51895485 1 21 794 0 9 2 0 10 0 0 21 0 0 21 10 10 23 10 10 19.64 24.84 74.99 0 2 3 Whitelist UCEC-US 1_3 0.54 0 0 0 0.02 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 32 0.02 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 20 35321548 35746576 2 2 794 0 2 0 0 0 0.11 0 5 0 0 5 3 3 30 14 14 19.64 8.36 90.63 0 4 2 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 4 0 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 21 16578331 44623844 1 4 794 0 4 0 0 0 0.01 0.03 8 0 0 8 8 8 11 9 11 19.64 5.12 72.23 0 2 3 Whitelist UCEC-US 0.21 0.12 0 0 0.16 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 22 20175097 51090221 1 16 794 1 4 0 0 11 0.04 0 18 0 0 18 8 10 24 9 13 19.64 28.87 59.61 0 2 3 Whitelist UCEC-US 0.68 0 0 0 0.36 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 21 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::79ecc142-8f6e-4260-a7ce-c8e2a6212c35 X 33723741 154359762 1 4 794 0 4 0 0 0 0.01 0.94 7 0 0 7 7 7 7 7 7 19.64 1.75 98.04 0 2 3 Whitelist UCEC-US 0.21 1 0 0 0.16 0 No UCEC-US 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 UCEC 0.86 1.9 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578398_C_G,CN:1 2 UCEC-US DO43314 TCGA-B5-A0K3 79ecc142-8f6e-4260-a7ce-c8e2a6212c35 female alive C54.1 62 NA 700 NA Included Uterus-AdenoCA UCEC US 0 23.03 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 2 NA NA 0 0 4 0 0 0 0 0 NA 0.04 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.13 NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 3 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 4 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 18 NA NA 0 0 4 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.27 NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 19 45927069 47377598 1 1 4 1 0 0 0 0 0.39 0.08 2 NA NA NA NA NA NA NA NA 0.05 2.45 97.01 0 1 2 Whitelist UCEC-US 0.62 0.22 NA NA 0.59 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 2 0.25 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b7d2d2b-abe6-4f32-add0-3715096995d1 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7b7d2d2b-abe6-4f32-add0-3715096995d1 UCEC 0.81 2 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42400 TCGA-BS-A0TC 7b7d2d2b-abe6-4f32-add0-3715096995d1 female alive C54.3 69 NA 2260 NA Included Uterus-AdenoCA UCEC US 0 74.34 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 1 203100161 204557173 2 2 276 0 2 0 0 0 0.11 0.43 3 0 0 NA NA NA 40 5 11 59.41 93.86 6.13 0 4 5 Whitelist UCEC-US 0.54 0.68 0 0 0.48 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 2 26846810 240295203 1 15 276 3 10 0 0 2 0 0.13 22 0 0 22 5 11 23 5 11 59.41 82.37 17.51 0 3 4 Whitelist UCEC-US 6 0.02 0.32 0 0 0.01 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 28 0.05 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 3 12055432 14299490 3 3 276 0 1 2 0 0 0.3 0.03 11 0 0 11 0 3 44 6 8 59.41 91.63 5.04 1 5 7 Whitelist UCEC-US 0.62 0.12 0 0 0.59 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 4 58983298 72329843 4 4 276 0 1 1 2 0 0.57 0.72 7 0 0 7 0 4 17 5 6 59.41 34.62 65.16 0 4 2 Whitelist UCEC-US 0.68 0.9 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 5 10327310 166315727 1 14 276 1 6 1 1 5 0.04 0.71 22 0 0 22 7 7 25 7 7 59.41 27.17 70.17 1 2 3 Whitelist UCEC-US 6 0.54 0.9 0 0 0.4 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 6 19379637 162628629 1 14 276 0 5 0 1 8 0.01 0.8 17 0 0 17 5 7 19 5 7 59.41 41.53 58.23 0 3 2 Whitelist UCEC-US 2_5 0.49 0.95 0 0 0.19 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 7 16915794 134817188 1 14 276 1 8 0 1 4 0 0.89 17 0 0 17 4 7 21 5 7 59.41 84.96 14.81 0 4 5 Whitelist UCEC-US 0.54 1 0 0 0.05 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 24 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 8 58329544 113693266 5 8 276 1 0 2 2 3 0.53 0 27 0 0 27 4 7 53 4 8 59.41 59.6 40.24 0 4 3 Whitelist UCEC-US 1 0 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 9 106282 38107794 12 19 276 2 5 3 2 7 0.57 0 21 0 0 21 4 9 25 4 9 59.41 30.27 68.99 0 4 5 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 31 0.06 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 10 3141349 129950100 1 8 276 1 5 0 0 2 0.01 0.77 11 0 0 11 7 11 11 7 7 59.41 99.88 0.02 1 3 4 Whitelist UCEC-US 0.28 0.93 0 0 0.19 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 11 3852207 113385154 1 12 276 0 8 0 0 4 0 1 7 0 0 7 4 7 7 4 7 59.41 99.57 0 0 4 3 Whitelist UCEC-US 0.09 1 0 0 0 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 12 59714920 71773169 2 2 276 0 0 1 1 0 0.57 0.25 3 0 0 NA NA NA 24 8 10 59.41 96.26 0 0 3 4 Whitelist UCEC-US 0.68 0.49 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 13 46734592 111061781 1 10 276 0 2 2 1 5 0.53 0.09 14 0 0 14 4 7 16 5 7 59.41 59.42 26.43 1 6 3 Whitelist UCEC-US 0.68 0.26 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 14 24628907 102405590 1 6 276 0 5 1 0 0 0.01 1 16 0 0 16 3 10 20 5 10 59.41 8.09 73.2 0 2 3 Whitelist UCEC-US 0.25 1 0 0 0.19 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 15 71649704 72252195 1 1 276 0 1 0 0 0 0.39 0.46 1 0 NA NA NA NA 8 6 6 59.41 47.93 36.5 0 2 NA Whitelist UCEC-US 0.62 0.7 0 NA 0.59 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 16 1845861 72561338 1 9 276 0 4 0 1 4 0.04 0.19 10 0 0 10 3 6 14 5 6 59.41 99.52 0.38 1 3 4 Whitelist UCEC-US 0.41 0.41 0 0 0.36 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 17 30290825 74277536 2 2 276 0 0 1 1 0 0.57 0.46 8 0 0 8 3 5 12 3 5 59.41 6.27 93.72 0 3 4 Whitelist UCEC-US 0.68 0.7 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 18 8851456 69296979 1 12 276 2 3 1 0 6 0.34 0.02 13 0 0 13 3 4 13 3 4 59.41 60.1 39.86 0 4 3 Whitelist UCEC-US 0.62 0.09 0 0 0.59 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 19 39409007 41418271 2 2 276 1 1 0 0 0 0.57 0.13 3 0 0 NA NA NA 12 8 8 59.41 55.82 44 0 2 3 Whitelist UCEC-US 0.68 0.31 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 20 18289077 52727015 2 6 276 1 1 0 0 4 0.57 0.01 7 0 0 7 5 7 16 5 13 59.41 98.87 0 0 4 5 Whitelist UCEC-US 0.68 0.05 0 0 0.64 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 21 27083500 45545192 1 9 276 0 3 0 0 6 0.03 0 8 0 0 8 3 8 9 3 9 59.41 6.84 70.51 0 2 3 Whitelist UCEC-US 0.62 0.01 0 0 0.33 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 22 26211335 36970433 1 2 276 0 2 0 0 0 0.11 0.15 5 0 0 5 0 4 11 3 6 59.41 60.63 15.58 0 3 4 Whitelist UCEC-US 0.54 0.35 0 0 0.48 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7b9947d5-e86b-4006-8890-ea5209584a88 X 7792543 8307241 1 1 276 1 0 0 0 0 0.39 0 1 NA NA NA NA NA NA NA NA 59.41 0 99.67 0 2 NA Whitelist UCEC-US 0.62 0.01 NA NA 0.59 0 No UCEC-US 7b9947d5-e86b-4006-8890-ea5209584a88 UCEC 0.89 3.06 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 3 UCEC-US DO40948 TCGA-AP-A0L9 7b9947d5-e86b-4006-8890-ea5209584a88 female alive C54.1 71 NA 3444 NA Included Uterus-AdenoCA UCEC US 0 113.29 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 1 36602110 224640789 1 10 120 0 5 0 1 4 0.01 0.23 19 0 0 19 7 15 21 7 15 15.24 49.98 47.05 4 3 4 Whitelist UCEC-US 0.62 0.47 0 0 0.19 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 16 0.07 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 2 47389795 203229105 1 8 120 1 7 0 0 0 0 0.62 11 0 0 11 11 11 11 11 11 15.24 0.29 99.59 1 2 3 Whitelist UCEC-US 0.06 0.83 0 0 0.04 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 16 0.07 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 3 10044478 169928464 1 10 120 1 5 0 0 4 0.01 0.21 10 0 0 10 7 10 11 7 7 15.24 0.71 99.17 0 2 3 Whitelist UCEC-US 0.18 0.43 0 0 0.19 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 16 0.07 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 4 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 5 57417620 172090205 1 5 120 0 3 1 0 1 0.11 0.71 2 0 0 NA NA NA 4 3 4 15.24 25.03 71.84 0 2 3 Whitelist UCEC-US 0.62 0.9 0 0 0.48 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 9 0.04 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 6 111007847 162618108 1 4 120 1 1 1 0 1 0.8 0.85 5 0 0 5 3 5 9 7 7 15.24 0.31 99.55 0 2 1 Whitelist UCEC-US 1 0.98 0 0 0.84 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 7 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 7 117000161 117406905 3 3 120 0 3 0 0 0 0.03 0.07 1 0 0 NA NA NA 12 3 5 15.24 5.98 93.8 0 2 NA Whitelist UCEC-US 0.41 0.21 0 0 0.33 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 6 0.02 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 8 128745035 128759943 1 1 120 1 0 0 0 0 0.39 0.84 1 0 NA NA NA NA 7 3 5 15.24 1.76 98.24 0 16 NA Whitelist UCEC-US 0.62 0.97 0 NA 0.59 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 2 0.01 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 9 5700759 117545836 1 5 120 0 3 0 0 2 0.03 0.81 4 0.03 0 4 4 4 5 5 5 15.24 0.32 98.97 0 2 3 Whitelist UCEC-US 14 0.62 0.96 0.03 0 0.33 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 8 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 10 61544082 105372550 1 4 120 0 4 0 0 0 0.01 0.66 8 0 0 8 8 8 9 9 9 15.24 0.71 99.17 0 2 3 Whitelist UCEC-US 0.21 0.87 0 0 0.16 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 8 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 11 19128606 118506424 1 4 120 0 4 0 0 0 0.01 0.66 8 0 0 8 8 8 13 11 13 15.24 1.19 98.39 0 2 3 Whitelist UCEC-US 0.21 0.87 0 0 0.16 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 8 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 12 56300322 56518229 2 2 120 0 2 0 0 0 0.11 0.51 2 0 0 NA NA NA 7 5 7 15.24 0.28 99.64 0 2 4 Whitelist UCEC-US 0.54 0.76 0 0 0.48 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 4 0.02 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 13 41979931 42180069 4 4 120 1 1 1 1 0 1 0.61 2 0 0 NA NA NA NA NA NA 15.24 0.17 99.83 0 2 3 Whitelist UCEC-US 1 0.83 0 0 1 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 8 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 14 22880504 74106275 1 8 120 0 3 0 1 4 0.11 0.06 7 0 0 7 5 7 8 5 7 15.24 0.63 98.45 0 2 3 Whitelist UCEC-US 9 0.87 0.18 0 0 0.48 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 12 0.05 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 15 72669559 90964845 1 1 120 1 0 0 0 0 0.39 0.58 2 NA NA NA NA NA 5 5 5 15.24 0.44 99.42 0 2 3 Whitelist UCEC-US 0.62 0.8 NA NA 0.59 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 2 0.01 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 16 68010576 74893197 2 2 120 1 0 0 1 0 0.57 0.04 5 0 0 5 4 5 19 16 16 15.24 2.13 97.86 0 2 3 Whitelist UCEC-US 0.68 0.15 0 0 0.64 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 4 0.02 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 17 37633472 38054228 2 2 120 0 2 0 0 0 0.11 0.57 4 0 0 4 3 4 12 4 4 15.24 25.2 74.75 0 3 2 Whitelist UCEC-US 0.54 0.79 0 0 0.48 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 4 0.02 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 18 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 19 12780466 30354557 1 8 120 0 3 0 1 4 0.11 0 13 0 0 13 7 10 22 8 8 15.24 52.48 40.2 0 3 2 Whitelist UCEC-US 0.62 0 0 0 0.48 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 12 0.05 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 20 1366215 15466574 1 6 120 2 2 0 0 2 0.26 0.05 8 0 0 8 5 8 11 5 5 15.24 1.9 97.12 0 2 1 Whitelist UCEC-US 0.62 0.15 0 0 0.59 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 10 0.04 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 21 NA NA 0 0 120 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 22 35550760 47082817 1 5 120 0 3 0 0 2 0.03 0 7 0 0 7 7 7 9 9 9 15.24 2.16 97.84 0 2 3 Whitelist UCEC-US 1 0.62 0 0 0 0.33 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 8 0.03 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::7dce4215-01f6-43e9-9378-9e22c26c23a2 X 153951012 154197230 1 1 120 0 1 0 0 0 0.39 0.03 1 NA NA NA NA NA NA NA NA 15.24 99.77 0 0 3 NA Whitelist UCEC-US 0.62 0.12 NA NA 0.59 0 No UCEC-US 7dce4215-01f6-43e9-9378-9e22c26c23a2 UCEC 0.92 2.1 Uterus-AdenoCA NA 2 0.01 NA 2 UCEC-US DO41080 TCGA-AP-A0LH 7dce4215-01f6-43e9-9378-9e22c26c23a2 female deceased C54.1 60 1106 NA NA Included Uterus-AdenoCA UCEC US 1 36.38 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 1 61913009 62191893 2 2 422 1 1 0 0 0 0.57 0.1 2 0 0 NA NA NA 35 6 9 67.89 100 0 0 4 7 Whitelist UCEC-US 0.68 0.27 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 2 85536715 86025768 3 3 422 0 1 1 1 0 0.8 0.54 5 0 0 5 3 5 45 6 12 67.89 92.94 6.93 0 4 5 Whitelist UCEC-US 0.87 0.77 0 0 0.84 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 6 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 3 23738446 169522007 6 16 422 2 5 2 3 4 0.57 0.02 53 0 0 53 7 27 60 7 7 67.89 95.25 1.63 0 3 4 Whitelist UCEC-US 0.68 0.07 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 28 0.03 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 False positive; manually removed UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 4 54304481 59035528 3 7 422 0 2 0 1 4 0.3 1 6 0 0 6 0 3 41 8 8 67.89 97.44 0.19 0 4 5 Whitelist UCEC-US 0.62 1 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 10 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 5 79241781 79909434 2 2 422 1 1 0 0 0 0.57 0.23 5 0 0 5 4 5 26 4 6 67.89 26.1 71.24 1 3 4 Whitelist UCEC-US 0.68 0.46 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 6 51901142 155973305 4 9 422 0 3 1 0 5 0.11 0.92 23 0 0 23 10 10 35 10 14 67.89 97.14 0.02 0 4 5 Whitelist UCEC-US 0.68 1 0 0 0.48 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 13 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 False positive; manually removed UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 7 97728089 108887988 2 2 422 1 1 0 0 0 0.57 0.01 9 0 0 9 6 9 48 7 8 67.89 75.54 21.88 0 5 6 Whitelist UCEC-US 0.68 0.06 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 8 37994756 68304050 5 10 422 1 2 1 1 5 0.9 0.01 22 0 0 22 4 5 40 4 6 67.89 69.31 26.67 0 5 9 Whitelist UCEC-US 6 0.96 0.06 0 0 0.92 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 15 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 9 1405855 139930203 1 6 422 2 2 1 0 1 0.53 0.03 18 0 0 18 5 8 19 5 5 67.89 8.57 88.34 0 2 3 Whitelist UCEC-US 0.68 0.12 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 11 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 10 45251444 131608265 1 19 422 4 6 2 2 5 0.37 0.56 33 0 0 33 5 17 34 5 7 67.89 99.82 0 0 4 5 Whitelist UCEC-US 20 0.81 0.78 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 33 0.04 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 11 65155564 65551137 3 6 422 0 2 0 1 3 0.3 0.42 6 0 0 6 3 4 33 5 5 67.89 70.4 26.01 0 5 6 Whitelist UCEC-US 0.93 0.67 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 9 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 12 25381426 133282787 1 13 422 3 4 0 1 5 0.17 0.35 17 0 0 17 7 9 17 7 7 67.89 36.72 59.11 0 4 3 Whitelist UCEC-US 18 0.8 0.61 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 21 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 13 21981455 102634344 1 7 422 1 3 0 1 2 0.28 0.42 6 0 0 6 5 6 8 5 5 67.89 61.28 38.72 0 3 4 Whitelist UCEC-US 7 0.68 0.67 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 12 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 14 35591883 35939852 3 3 422 0 2 1 0 0 0.3 0.16 5 0 0 5 0 5 9 3 4 67.89 0.69 98.4 0 4 3 Whitelist UCEC-US 0.62 0.37 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 6 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 15 30583371 37828272 2 3 422 1 0 0 1 1 0.57 1 6 0 0 6 6 6 14 9 9 67.89 64.53 35.47 0 2 3 Whitelist UCEC-US 0.62 1 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 5 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 16 73837627 74320254 2 2 422 0 2 0 0 0 0.11 0.76 4 0 0 4 3 4 19 4 4 67.89 64.19 35.01 0 5 4 Whitelist UCEC-US 0.54 0.93 0 0 0.48 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 17 40474637 46679149 3 7 422 1 1 1 0 4 0.8 0 9 0 0 9 3 9 38 11 13 67.89 63.27 31.24 0 4 5 Whitelist UCEC-US 0.77 0.01 0 0 0.84 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 10 0.01 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 18 9371460 59533908 1 10 422 1 2 2 2 3 0.93 0.05 19 0 0 19 4 11 21 5 5 67.89 91.06 8.9 0 4 3 Whitelist UCEC-US 0.68 0.16 0 0 0.95 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 17 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 19 53521535 54443033 2 2 422 1 0 0 1 0 0.57 0.01 4 0 0 4 3 4 24 14 14 67.89 99.19 0.64 0 4 3 Whitelist UCEC-US 0.68 0.06 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 20 45008349 45922169 2 2 422 1 1 0 0 0 0.57 0.03 4 0 0 4 4 4 20 6 10 67.89 98.77 0.13 0 3 4 Whitelist UCEC-US 0.68 0.1 0 0 0.64 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 4 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 21 NA NA 0 0 422 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 22 19039995 39045748 5 11 422 2 2 0 1 6 0.53 0 21 0 0 21 8 19 27 8 8 67.89 61.72 38.28 0 3 4 Whitelist UCEC-US 0.87 0 0 0 0.64 0 High confidence UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA With other complex events 16 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::8d9e4917-334b-4c76-aee1-1e22be772db0 X 45449406 65809075 7 14 422 4 1 1 1 7 0.28 0.01 28 0 0 28 3 5 48 5 5 67.89 53.1 43.51 5 2 6 Whitelist UCEC-US 0.62 0.03 0 0 0.59 0 No UCEC-US 8d9e4917-334b-4c76-aee1-1e22be772db0 UCEC 0.46 3.34 Uterus-AdenoCA NA 21 0.02 NA 2 UCEC-US DO41716 TCGA-BK-A139 8d9e4917-334b-4c76-aee1-1e22be772db0 female alive C54.1 74 NA 239 NA Included Uterus-AdenoCA UCEC US 0 7.86 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 1 1165528 207496706 1 9 226 1 8 0 0 0 0 0.62 17 0 0 17 5 6 20 8 10 69.32 81.13 18.87 12 3 2 Whitelist UCEC-US 0.02 0.83 0 0 0.02 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 2 30991919 219707625 1 23 226 3 16 0 0 4 0 0 35 0 0 35 7 16 41 7 12 69.32 99.79 0.09 26 5 4 Whitelist UCEC-US 0 0.02 0 0 0 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 42 0.09 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 3 97453863 175224321 2 6 226 0 1 0 1 4 0.57 0.19 20 0 0 20 5 7 32 5 8 69.32 67.54 32.34 9 4 2 Whitelist UCEC-US 2 0.93 0.41 0 0 0.64 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 4 14976826 149660090 1 8 226 6 1 0 0 1 0 0.35 11 0 0 11 7 11 12 8 8 69.32 80.86 19.12 12 3 2 Whitelist UCEC-US 0.28 0.6 0 0 0.09 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 5 12612756 177094763 1 10 226 1 6 0 0 3 0 0.49 17 0 0 17 5 6 18 5 5 69.32 70.25 27.09 10 4 5 Whitelist UCEC-US 0.54 0.74 0 0 0.09 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 6 10497540 167109463 1 15 226 3 7 1 0 4 0.02 0.21 24 0 0 24 6 7 25 7 7 69.32 86.17 13.61 9 4 3 Whitelist UCEC-US 0.41 0.43 0 0 0.27 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 26 0.06 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 7 18503282 139455166 1 7 226 1 6 0 0 0 0 0.66 10 0 0 10 8 10 11 9 9 69.32 0.24 99.53 0 2 3 Whitelist UCEC-US 0.13 0.87 0 0 0.09 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 8 28872518 128910396 1 8 226 1 3 0 1 3 0.28 1 11 0 0 11 5 10 15 5 6 69.32 99.75 0.25 12 4 3 Whitelist UCEC-US 0.62 1 0 0 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 9 3904814 4036804 1 1 226 1 0 0 0 0 0.39 0 3 NA NA NA NA NA 4 4 4 69.32 33.37 64.08 0 3 2 Whitelist UCEC-US 0.62 0.02 NA NA 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 10 6370317 104420737 1 7 226 1 4 0 0 2 0.04 0.34 13 0 0 13 5 5 14 5 5 69.32 68.57 28.08 5 3 2 Whitelist UCEC-US 0.62 0.59 0 0 0.36 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 11 16238198 102436061 1 9 226 1 3 0 0 5 0.11 0.87 13 0 0 13 5 5 16 5 6 69.32 85.51 14.06 11 3 4 Whitelist UCEC-US 0.85 1 0 0 0.48 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 12 1512682 112634460 1 22 226 4 8 1 1 8 0.02 0 33 0 0 33 6 11 34 6 11 69.32 85.2 11.06 13 4 3 Whitelist UCEC-US 0.21 0 0 0 0.33 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 36 0.08 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 13 40643554 113457401 1 9 226 2 0 1 0 6 0.3 0.04 13 0 0 13 4 12 14 4 6 69.32 99.94 0.06 1 4 1 Whitelist UCEC-US 11_5 0.62 0.14 0 0 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 14 68593357 68797089 2 2 226 0 2 0 0 0 0.11 0.25 4 0 0 4 3 4 14 5 10 69.32 80.11 3.98 0 4 3 Whitelist UCEC-US 0.54 0.49 0 0 0.48 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 15 55797230 55844097 1 1 226 0 1 0 0 0 0.39 0.54 2 0 NA NA NA NA 5 3 5 69.32 0.09 99.82 0 2 3 Whitelist UCEC-US 0.62 0.77 0 NA 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 16 57333947 57581586 1 1 226 0 1 0 0 0 0.39 0.84 2 0 NA NA NA NA 10 6 10 69.32 37.69 61.37 0 2 3 Whitelist UCEC-US 0.62 0.97 0 NA 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 17 57916713 57949593 2 2 226 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 29 4 5 69.32 58.21 37.36 0 3 8 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 18 2290098 3330382 1 2 226 1 1 0 0 0 0.57 1 6 0 0 6 5 6 13 5 6 69.32 29.36 66 2 7 6 Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 19 11000359 11070220 2 2 226 1 0 1 0 0 0.57 0 4 0 0 4 3 4 22 4 5 69.32 73.82 17.8 0 8 11 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 20 9339619 9371555 1 1 226 0 1 0 0 0 0.39 0.64 2 NA NA NA NA NA 6 3 3 69.32 92.87 0 0 4 6 Whitelist UCEC-US 0.62 0.85 NA NA 0.59 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 21 NA NA 0 0 226 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c 22 30620069 38530395 1 2 226 0 2 0 0 0 0.11 0.2 3 0 0 NA NA NA 5 3 5 69.32 100 0 0 3 5 Whitelist UCEC-US 0.54 0.42 0 0 0.48 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::9205c164-7975-421a-90c3-edfe8def595c X 32331327 124147538 1 2 226 2 0 0 0 0 0.11 0 4 NA 0 4 4 4 4 4 4 69.32 99.77 0 6 3 4 Whitelist UCEC-US 0.54 0.01 NA 0 0.48 0 No UCEC-US 9205c164-7975-421a-90c3-edfe8def595c UCEC 0.42 3.3 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577534_A_C,CN:2 3 UCEC-US DO41398 TCGA-E6-A1LZ 9205c164-7975-421a-90c3-edfe8def595c female alive C54.1 76 NA 1289 NA Included Uterus-AdenoCA UCEC US 0 42.4 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 1 21783936 193088845 1 9 189 2 4 0 0 3 0.06 0.89 10 0 0 10 3 7 19 3 5 80.46 100 0 0 3 4 Whitelist UCEC-US 0.68 1 0 0 0.48 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 15 0.04 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 2 27941105 240035329 1 6 189 0 2 0 2 2 0.26 0.02 10 0 0 10 5 8 11 5 5 80.46 97.06 0 0 4 3 Whitelist UCEC-US 0.62 0.07 0 0 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 10 0.03 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 3 104698386 197525118 33 43 189 7 9 6 11 10 0.62 0 40 0 0 40 8 14 44 8 14 80.46 98.41 1.47 0 4 5 Whitelist UCEC-US X 0.62 0 0 0 0.69 1 High confidence UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA With other complex events 76 0.2 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 4 12328875 95963494 1 6 189 2 1 0 0 3 0.3 0.11 7 0 0 7 3 5 7 3 3 80.46 99.67 0.1 0 3 1 Whitelist UCEC-US 0.54 0.28 0 0 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 9 0.02 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 5 74663731 75233957 3 3 189 1 2 0 0 0 0.3 1 3 0 0 NA NA NA 11 9 11 80.46 99.87 0 0 4 6 Whitelist UCEC-US 0.62 1 0 0 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 6 0.02 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 6 168863124 169315992 2 2 189 0 1 0 1 0 0.57 0.76 4 0 0 4 0 4 16 8 10 80.46 99.85 0 0 6 4 Whitelist UCEC-US 0.68 0.92 0 0 0.64 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 4 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 7 124947485 125181302 1 1 189 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 4 3 3 80.46 60.9 36.42 0 3 4 Whitelist UCEC-US 0.62 0.06 NA NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 8 4923035 135957192 1 19 189 0 3 2 1 13 0.34 0 21 0 0 21 7 7 22 7 8 80.46 64.43 31.85 0 4 2 Whitelist UCEC-US 3_X 0.68 0.01 0 0 0.59 1 Linked to high confidence UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA With other complex events 25 0.07 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 9 38331728 38547972 1 1 189 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA NA NA NA 80.46 99.3 0 0 3 5 Whitelist UCEC-US 0.62 0.04 NA NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 10 73616781 73754356 1 4 189 1 0 2 1 0 0.57 1 5 0 0 5 3 3 10 4 5 80.46 48.02 51.79 0 2 4 Whitelist UCEC-US 0.68 1 0 0 0.64 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 8 0.02 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 11 63721882 79686724 3 3 189 1 1 1 0 0 0.8 1 9 0 0 9 6 9 16 6 6 80.46 52.89 43.58 0 2 4 Whitelist UCEC-US 0.87 1 0 0 0.84 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 6 0.02 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 12 NA NA 0 0 189 0 0 0 0 0 NA 0.39 NA 0 NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist UCEC-US NA 0.64 0 NA NA 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 0 0 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 13 48675117 50064185 1 1 189 1 0 0 0 0 0.39 0.69 2 0 NA NA NA NA 10 4 4 80.46 60.74 39.26 0 0 2 Whitelist UCEC-US 0.62 0.89 0 NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 14 43056351 43163931 1 1 189 1 0 0 0 0 0.39 0.84 2 0 NA NA NA NA 5 3 3 80.46 83.99 0.1 0 2 3 Whitelist UCEC-US 0.62 0.97 0 NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 15 90442356 90894402 1 1 189 0 1 0 0 0 0.39 0.82 2 NA NA NA NA NA 6 5 5 80.46 30.06 69.81 0 4 6 Whitelist UCEC-US 0.62 0.96 NA NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 16 8182968 8282912 1 1 189 0 1 0 0 0 0.39 0.82 2 NA NA NA NA NA 6 3 5 80.46 63.39 36.52 0 3 4 Whitelist UCEC-US 0.62 0.96 NA NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 17 18654855 79898834 1 8 189 0 4 0 0 4 0.01 0.18 14 0 0 14 3 11 14 3 11 80.46 68.22 27.33 0 4 3 Whitelist UCEC-US 0.54 0.39 0 0 0.16 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 12 0.03 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 18 NA NA 0 0 189 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 0 0 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 19 10254233 11169994 1 1 189 0 1 0 0 0 0.39 0.43 2 0 NA NA NA NA 12 0 4 80.46 85.03 14.79 0 9 12 Whitelist UCEC-US 0.62 0.68 0 NA 0.59 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 2 0.01 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 20 7153601 19861801 4 4 189 1 1 1 1 0 1 0 10 0 0 10 5 9 13 5 8 80.46 81.18 11.72 0 4 5 Whitelist UCEC-US 1 0.01 0 0 1 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 8 0.02 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 21 NA NA 0 0 189 0 0 0 0 0 NA 1 NA NA NA NA NA NA 4 0 3 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 0 0 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 22 32093117 32660408 10 10 189 1 4 2 3 0 0.57 0 9 0 0 9 4 5 17 5 6 80.46 74.95 25.05 0 4 6 Whitelist UCEC-US 0.68 0 0 0 0.64 1 No UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA NA 20 0.05 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::944a102f-3475-45aa-9e30-4b92d1449f00 X 7578980 79744210 1 8 189 1 0 1 0 6 0.57 0.24 11 0 0 11 5 6 16 5 9 80.46 93.38 6.39 0 2 3 Whitelist UCEC-US 3_8 0.87 0.48 0 0 0.64 1 Linked to high confidence UCEC-US 944a102f-3475-45aa-9e30-4b92d1449f00 UCEC 0.63 3.6 Uterus-AdenoCA With other complex events 10 0.03 stopgain,17_7578500_A_G,CN:2 4 UCEC-US DO41911 TCGA-DI-A1NN 944a102f-3475-45aa-9e30-4b92d1449f00 female alive C54.1 63 NA 944 NA Included Uterus-AdenoCA UCEC US 0 31.05 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 1 13997739 232600868 1 9 283 4 4 1 0 0 0.13 0.91 23 0 0 23 6 23 25 6 6 41.53 37.29 62.71 0 2 3 Whitelist UCEC-US 0.62 1 0 0 0.55 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 2 17761409 217008608 1 16 283 0 9 2 1 4 0 0.67 16 0 0 16 5 7 18 5 7 41.53 45.32 54.57 0 3 4 Whitelist UCEC-US 0.04 0.87 0 0 0.05 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 28 0.05 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 3 42025446 172171958 1 9 283 1 6 0 0 2 0 0.73 11 0 0 11 9 11 18 11 11 41.53 41.24 58.67 0 3 2 Whitelist UCEC-US 0.12 0.9 0 0 0.09 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 4 19493463 74224992 1 3 283 1 2 0 0 0 0.3 0.02 4 0 0 4 3 4 6 4 4 41.53 62.55 37.44 0 2 1 Whitelist UCEC-US 0.62 0.07 0 0 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 5 49818081 170492501 1 6 283 2 4 0 0 0 0.06 0.81 15 0 0 15 11 15 17 11 11 41.53 26.73 70.57 0 2 3 Whitelist UCEC-US 0.54 0.95 0 0 0.48 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 6 122762195 169189522 2 2 283 0 0 1 1 0 0.57 0.02 8 0 0 8 8 8 16 13 13 41.53 6.42 93.41 0 2 3 Whitelist UCEC-US 0.68 0.07 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 7 2879100 159105485 1 7 283 1 2 1 1 2 0.9 0.79 15 0 0 15 5 15 16 5 5 41.53 22.84 77.11 0 2 3 Whitelist UCEC-US 0.62 0.94 0 0 0.92 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 8 36454035 145008525 3 11 283 0 0 1 2 8 0.3 0.03 17 0 0 17 3 9 20 4 5 41.53 71.95 28.04 0 4 2 Whitelist UCEC-US 10_3 0.68 0.11 0 0 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 9 116291270 116328641 1 1 283 0 1 0 0 0 0.39 1 1 0 NA NA NA NA 8 6 6 41.53 51.48 47.82 0 1 NA Whitelist UCEC-US 0.62 1 0 NA 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 10 35631980 100628272 2 9 283 1 0 0 1 7 0.57 0 11 0 0 11 5 5 17 6 6 41.53 62.76 37.06 0 2 1 Whitelist UCEC-US 6 0.85 0.01 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 11 42797136 100821244 1 7 283 1 2 0 1 3 0.57 0.57 10 0 0 10 5 7 11 5 5 41.53 55.56 40.32 0 2 3 Whitelist UCEC-US 13 0.96 0.8 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 12 30043451 32863601 2 2 283 0 0 1 1 0 0.57 0.89 1 0 0 NA NA NA 13 7 7 41.53 28.48 67.78 0 2 NA Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 13 46841952 110191361 1 6 283 2 1 0 0 3 0.3 0.62 6 0 0 6 5 6 8 5 5 41.53 38.25 61.75 0 2 3 Whitelist UCEC-US 11 0.68 0.84 0 0 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 14 24684088 34422501 2 2 283 0 0 1 1 0 0.57 0.87 1 0 0 NA NA NA NA NA NA 41.53 0.12 98.96 0 2 NA Whitelist UCEC-US 0.68 1 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 15 30970158 89199165 1 6 283 0 3 0 0 3 0.03 0.27 6 0 0 6 6 6 7 7 7 41.53 65.19 34.72 0 1 2 Whitelist UCEC-US 0.54 0.51 0 0 0.33 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 16 67590378 89462801 17 19 283 6 3 3 5 2 0.66 0 5 0 0 5 5 5 6 6 6 41.53 38.14 60.77 5 1 2 Whitelist UCEC-US 0.87 0 0 0 0.74 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 36 0.06 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 17 34019489 56468953 2 2 283 0 0 1 1 0 0.57 0.06 1 0 0 NA NA NA 7 3 3 41.53 89.28 10.71 0 1 NA Whitelist UCEC-US 0.68 0.19 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 18 43138580 43817510 1 1 283 0 1 0 0 0 0.39 0.2 2 0 0 NA NA NA 6 6 6 41.53 73.51 20.57 0 1 2 Whitelist UCEC-US 0.62 0.42 0 0 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 19 12008643 20316026 1 2 283 1 1 0 0 0 0.57 0.83 3 0 0 NA NA NA 4 4 4 41.53 48.3 51.53 0 2 1 Whitelist UCEC-US 0.68 0.97 0 0 0.64 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 20 5610401 61435667 1 6 283 0 4 0 0 2 0.01 0.68 7 0 0 7 7 7 8 8 8 41.53 18.54 81.2 0 3 2 Whitelist UCEC-US 0.54 0.88 0 0 0.16 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 21 31457580 31918799 1 1 283 0 1 0 0 0 0.39 0.41 2 0 NA NA NA NA 6 4 6 41.53 6.14 70.65 0 2 3 Whitelist UCEC-US 0.62 0.65 0 NA 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 22 37989909 38043844 1 1 283 1 0 0 0 0 0.39 1 1 NA NA NA NA NA NA NA NA 41.53 64.22 23.78 0 1 NA Whitelist UCEC-US 0.62 1 NA NA 0.59 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::94817e78-78f5-4556-9394-610df65605e2 X NA NA 0 0 283 0 0 0 0 0 NA 0.28 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.52 0 NA NA 0 No UCEC-US 94817e78-78f5-4556-9394-610df65605e2 UCEC 0.82 1.9 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578271_C_T,CN:1 2 UCEC-US DO43210 TCGA-A5-A0GJ 94817e78-78f5-4556-9394-610df65605e2 female alive C54.1 44 NA 1447 NA Included Uterus-AdenoCA UCEC US 0 47.6 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 1 988749 203866194 1 15 141 1 3 0 1 10 0.28 0.02 14 0 0 14 5 6 15 5 7 42.59 40.07 59.53 0 2 3 Whitelist UCEC-US 15 0.68 0.08 0 0 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 20 0.07 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 2 45806639 159915691 1 12 141 2 5 0 0 5 0.02 0.88 14 0 0 14 4 6 15 4 5 42.59 1.97 97.92 0 2 3 Whitelist UCEC-US 3_8 0.12 1 0 0 0.33 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 19 0.07 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 3 13471312 168163898 3 7 141 0 0 1 2 4 0.3 0 17 0 0 17 8 8 28 8 8 42.59 18.5 78.43 0 2 1 Whitelist UCEC-US 0.62 0 0 0 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 False positive; manually removed UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 4 39913319 188832640 1 6 141 1 0 1 0 4 0.57 0.5 7 0 0 7 3 4 10 3 3 42.59 23.05 76.92 0 2 3 Whitelist UCEC-US 0.93 0.75 0 0 0.64 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 5 63624058 153724498 1 4 141 1 1 0 1 1 0.8 0.73 5 0 0 5 5 5 9 9 9 42.59 62.84 37.02 0 2 1 Whitelist UCEC-US 1 0.9 0 0 0.84 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 7 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 6 16034916 76284794 4 8 141 1 2 3 2 0 0.8 0.07 8 0 0 8 3 7 15 3 9 42.59 2.37 97.38 0 2 3 Whitelist UCEC-US 0.87 0.21 0 0 0.84 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 7 9918953 74136588 1 8 141 1 5 0 0 2 0.01 0.57 13 0 0 13 8 12 13 8 8 42.59 35.18 62.44 0 2 3 Whitelist UCEC-US 0.54 0.8 0 0 0.19 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 14 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 8 908520 69178608 1 6 141 0 2 0 0 4 0.11 0.44 5 0 0 5 5 5 9 9 9 42.59 1.19 98.7 0 2 3 Whitelist UCEC-US 0.68 0.69 0 0 0.48 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 9 118094606 118656002 1 1 141 0 1 0 0 0 0.39 0.51 2 0 NA NA NA NA 14 9 9 42.59 90.92 6.62 0 1 2 Whitelist UCEC-US 0.62 0.75 0 NA 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 10 29437108 79669756 1 3 141 1 2 0 0 0 0.3 0.01 5 0 0 5 3 3 17 7 7 42.59 81.02 18.9 0 1 2 Whitelist UCEC-US 0.62 0.03 0 0 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 11 63017683 108572984 1 5 141 2 3 0 0 0 0.14 0.54 8 0 0 8 5 7 11 5 7 42.59 33 66.85 1 2 4 Whitelist UCEC-US 0.62 0.77 0 0 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 12 47135393 123756567 1 11 141 0 4 0 0 7 0.01 0.1 10 0 0 10 5 7 11 5 7 42.59 42.65 57.26 0 2 3 Whitelist UCEC-US 0.62 0.27 0 0 0.16 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 15 0.05 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 13 104698296 112214828 3 3 141 1 2 0 0 0 0.3 0.82 9 0 0 9 5 5 14 8 8 42.59 95 5 0 1 2 Whitelist UCEC-US 0.62 0.96 0 0 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 14 51127754 82657304 1 3 141 0 2 0 0 1 0.11 0.81 5 NA 0 5 4 5 6 4 4 42.59 38.97 61.03 0 1 2 Whitelist UCEC-US 0.62 0.95 NA 0 0.48 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 15 44414684 90485790 1 3 141 1 1 0 0 1 0.57 0.29 5 0 0 5 5 5 7 7 7 42.59 97.79 2.04 0 2 1 Whitelist UCEC-US 0.62 0.54 0 0 0.64 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 16 11993582 79334013 1 4 141 1 3 0 0 0 0.11 0.79 6 0 0 6 3 6 7 3 3 42.59 99.79 0.1 0 1 2 Whitelist UCEC-US 0.54 0.94 0 0 0.48 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 17 29607926 46744900 2 2 141 0 0 1 1 0 0.57 0.11 5 0 0 5 4 5 12 6 6 42.59 34.3 65.69 0 2 3 Whitelist UCEC-US 0.68 0.29 0 0 0.64 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 18 21214554 21280982 1 1 141 0 1 0 0 0 0.39 0.19 2 NA NA NA NA NA NA NA NA 42.59 0.09 99.88 0 1 2 Whitelist UCEC-US 0.62 0.41 NA NA 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 19 10869424 19580633 1 2 141 0 2 0 0 0 0.11 0.76 4 NA 0 4 4 4 8 5 5 42.59 17.84 81.99 0 2 3 Whitelist UCEC-US 0.54 0.92 NA 0 0.48 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 20 45614956 50434411 1 2 141 0 2 0 0 0 0.11 0 3 0 0 NA NA NA 11 4 6 42.59 90.14 2.7 0 3 2 Whitelist UCEC-US 0.54 0.02 0 0 0.48 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 21 NA NA 0 0 141 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 22 38340410 38879821 1 1 141 0 1 0 0 0 0.39 0 2 0 NA NA NA NA 7 7 7 42.59 94.7 5.3 0 1 2 Whitelist UCEC-US 0.62 0 0 NA 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::95e6d327-9ab7-45de-9527-f5634b3995c3 X 67860623 67917726 1 1 141 1 0 0 0 0 0.39 0.05 2 NA NA NA NA NA 4 3 4 42.59 96.63 0 0 0 1 Whitelist UCEC-US 0.62 0.17 NA NA 0.59 0 No UCEC-US 95e6d327-9ab7-45de-9527-f5634b3995c3 UCEC 0.66 1.68 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577153_A_C,CN:1 2 UCEC-US DO40930 TCGA-AX-A06B 95e6d327-9ab7-45de-9527-f5634b3995c3 female alive C54.1 72 NA 1640 NA Included Uterus-AdenoCA UCEC US 0 53.95 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 1 26189202 48464923 1 6 127 2 2 0 0 2 0.26 0.87 8 0 0 8 5 8 13 5 5 68.61 61.72 34.97 0 4 2 Whitelist UCEC-US 0.62 1 0 0 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 2 66768051 221983467 1 11 127 2 4 0 1 4 0.17 0.2 18 0 0 18 5 8 20 5 8 68.61 99.31 0.6 0 3 5 Whitelist UCEC-US 10 0.54 0.42 0 0 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 18 0.07 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 3 2135467 169258954 1 8 127 3 3 0 2 0 0.39 0.29 17 0 0 17 4 8 20 5 6 68.61 96.85 0.09 0 3 2 Whitelist UCEC-US 0.62 0.54 0 0 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 4 129576633 133515672 3 3 127 2 1 0 0 0 0.3 0.03 4 0 0 4 4 4 24 5 11 68.61 86.78 13.03 0 2 3 Whitelist UCEC-US 0.62 0.11 0 0 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 5 124440722 124863653 2 2 127 0 0 1 1 0 0.57 0.07 1 0 0 NA NA NA 4 4 4 68.61 25.58 71.76 0 2 NA Whitelist UCEC-US 0.68 0.2 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 6 82016585 167338762 1 10 127 1 2 0 1 6 0.57 0.06 15 0 0 15 3 7 16 3 7 68.61 70.83 28.97 0 6 2 Whitelist UCEC-US 0.47 0.18 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 14 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 7 7153627 159121438 1 8 127 2 6 0 0 0 0.01 0.43 14 0 0 14 9 13 14 9 13 68.61 61.08 38.88 0 4 6 Whitelist UCEC-US 0.21 0.68 0 0 0.16 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 16 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 8 18616606 123735438 1 6 127 1 2 1 0 2 0.57 0.54 10 0 0 10 4 6 12 4 6 68.61 76.62 23.29 0 7 9 Whitelist UCEC-US 0.93 0.77 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 9 NA NA 0 0 127 0 0 0 0 0 NA 0.07 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.2 NA NA NA 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 10 20495777 121198153 1 11 127 2 2 0 0 7 0.26 0.05 12 0 0 12 5 7 13 5 7 68.61 91.66 8.22 0 4 3 Whitelist UCEC-US 2 0.54 0.17 0 0 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 15 0.06 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 11 13963819 70334765 1 2 127 0 2 0 0 0 0.11 0.53 5 0 0 5 3 4 10 3 8 68.61 96.41 0 0 3 4 Whitelist UCEC-US 0.54 0.76 0 0 0.48 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 12 53854148 123955672 2 4 127 0 1 1 0 2 0.57 0.09 8 0 0 8 4 8 12 4 4 68.61 99.98 0 0 5 3 Whitelist UCEC-US 1 1 0.25 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 13 46066645 48953605 1 2 127 0 1 0 1 0 0.57 0.8 3 NA 0 NA NA NA 7 3 3 68.61 95.55 4.34 0 5 11 Whitelist UCEC-US 0.68 0.95 NA 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 14 23528251 24523534 1 1 127 0 1 0 0 0 0.39 0.8 2 NA NA NA NA NA 8 6 8 68.61 21.84 74.57 0 2 3 Whitelist UCEC-US 0.62 0.95 NA NA 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 15 69309363 69559571 3 3 127 0 1 1 1 0 0.8 0.41 4 0 0 4 4 4 9 5 7 68.61 77.67 17.55 0 3 4 Whitelist UCEC-US 0.87 0.65 0 0 0.84 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 16 48887277 49210449 1 1 127 0 1 0 0 0 0.39 0.59 2 NA NA NA NA NA NA NA NA 68.61 0.36 99.55 0 2 4 Whitelist UCEC-US 0.62 0.81 NA NA 0.59 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 17 16074148 73349664 1 7 127 1 1 0 1 4 0.8 0 10 0 0 10 4 5 11 4 4 68.61 48.74 50.64 0 4 5 Whitelist UCEC-US 0.77 0.01 0 0 0.84 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 10 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 18 6929930 65903039 4 4 127 1 1 1 1 0 1 0.09 6 0 0 6 4 6 11 4 4 68.61 97.2 2.74 0 6 4 Whitelist UCEC-US 1 0.24 0 0 1 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 19 11111555 31423760 1 5 127 1 1 0 0 3 0.57 0.04 8 0 0 8 3 4 11 3 4 68.61 71.92 20.5 0 5 4 Whitelist UCEC-US 0.93 0.14 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 7 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 20 15964124 33178128 1 4 127 0 4 0 0 0 0.01 0.36 8 0 0 8 5 8 9 5 5 68.61 91.74 0 0 4 3 Whitelist UCEC-US 0.21 0.61 0 0 0.16 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 8 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 21 NA NA 0 0 127 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 22 22585126 41923573 1 3 127 1 1 0 0 1 0.57 0.07 5 0 0 5 5 5 7 6 7 68.61 52.64 47.36 0 2 4 Whitelist UCEC-US 0.62 0.2 0 0 0.64 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 5 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::9aa8c2b4-db32-4899-bf0c-d578cb175e90 X NA NA 0 0 127 0 0 0 0 0 NA 0.22 NA NA NA NA NA NA 5 0 4 0 0 0 0 0 0 Whitelist UCEC-US NA 0.45 NA NA NA 0 No UCEC-US 9aa8c2b4-db32-4899-bf0c-d578cb175e90 UCEC 0.87 3.38 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO42169 TCGA-AP-A0L8 9aa8c2b4-db32-4899-bf0c-d578cb175e90 female deceased C54.1 70 1484 NA NA Included Uterus-AdenoCA UCEC US 1 48.82 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 1 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA 4 3 4 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 2 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 3 NA NA 0 0 4 0 0 0 0 0 NA 0.03 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.1 NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 4 90681344 91032224 1 1 4 0 1 0 0 0 0.39 0.24 2 NA NA NA NA NA NA NA NA 27.16 0.18 99.81 0 2 3 Whitelist UCEC-US 0.62 0.48 NA NA 0.59 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 2 0.25 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 8 NA NA 0 0 4 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.06 NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 10 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.39 NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 12 NA NA 0 0 4 0 0 0 0 0 NA 0.17 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.39 NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a081da6f-51f3-4555-a6b8-736f8c6cda39 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a081da6f-51f3-4555-a6b8-736f8c6cda39 UCEC 0.65 2.31 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO40867 TCGA-AP-A0LO a081da6f-51f3-4555-a6b8-736f8c6cda39 female deceased C54.1 45 1016 NA NA Included Uterus-AdenoCA UCEC US 1 33.42 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 1 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 2 47467320 47674918 1 1 7 0 1 0 0 0 0.39 0.02 2 NA NA NA NA NA 5 5 5 13.25 0.15 99.75 0 2 3 Whitelist UCEC-US 0.62 0.07 NA NA 0.59 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 2 0.14 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 3 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 4 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 5 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 6 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 7 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 8 55147260 128899858 1 2 7 1 1 0 0 0 0.57 0.05 4 NA 0 4 4 4 5 5 5 13.25 99.99 0 0 3 4 Whitelist UCEC-US 0.68 0.15 NA 0 0.64 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 4 0.29 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 9 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 10 62948336 63114310 1 1 7 0 1 0 0 0 0.39 0.28 1 NA NA NA NA NA NA NA NA 13.25 99.82 0 0 3 NA Whitelist UCEC-US 0.62 0.52 NA NA 0.59 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 2 0.14 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 11 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 12 43885073 44245832 1 1 7 0 1 0 0 0 0.39 0.29 1 NA NA NA NA NA NA NA NA 13.25 99.92 0 0 3 NA Whitelist UCEC-US 0.62 0.53 NA NA 0.59 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 2 0.14 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 13 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 14 NA NA 0 0 7 0 0 0 0 0 NA 0.2 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.42 NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 15 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 16 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 17 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 18 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 19 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 20 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 21 NA NA 0 0 7 0 0 0 0 0 NA 0.08 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.23 NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 22 NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a587e62e-430e-4f1b-82b7-6fbe856fdaf1 X NA NA 0 0 7 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a587e62e-430e-4f1b-82b7-6fbe856fdaf1 UCEC 0.6 2.14 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO42424 TCGA-A5-A0GE a587e62e-430e-4f1b-82b7-6fbe856fdaf1 female alive C54.1 38 NA 2717 NA Included Uterus-AdenoCA UCEC US 0 89.38 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 1 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 2 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 3 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 4 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 5 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 6 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 7 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 8 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 9 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 10 82305946 118880183 1 1 3 1 0 0 0 0 0.39 0.13 2 NA NA NA NA NA NA NA NA 10.47 26.99 72.83 0 1 2 Whitelist UCEC-US 0.62 0.32 NA NA 0.59 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 2 0.33 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 11 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 12 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 13 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 14 NA NA 0 0 3 0 0 0 0 0 NA 0.09 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.25 NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 15 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 16 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 17 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 18 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 19 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 20 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 21 34364549 36757255 1 1 3 0 1 0 0 0 0.39 0.04 2 NA NA NA NA NA NA NA NA 10.47 4.97 72.38 0 2 3 Whitelist UCEC-US 0.62 0.13 NA NA 0.59 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 2 0.33 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 22 NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::a8614c49-c7f1-4de9-bd2f-4764b094d604 X NA NA 0 0 3 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US a8614c49-c7f1-4de9-bd2f-4764b094d604 UCEC 0.43 1.96 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41056 TCGA-A5-A0GG a8614c49-c7f1-4de9-bd2f-4764b094d604 female alive C54.1 76 NA 2517 NA Included Uterus-AdenoCA UCEC US 0 82.8 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 1 16306658 167711700 15 15 315 4 4 4 3 0 0.98 0.29 15 0 0 15 5 6 32 7 7 22.72 7.48 92.52 0 2 3 Whitelist UCEC-US 0.99 0.54 0 0 0.99 0 Low confidence UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA With other complex events 30 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 2 136466414 137068056 2 4 315 0 2 1 1 0 0.57 0.1 3 0 0 NA NA NA 20 12 12 22.72 2.64 97.26 0 2 3 Whitelist UCEC-US 0.68 0.27 0 0 0.64 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 3 9027144 9560948 4 4 315 2 2 0 0 0 0.26 0.27 2 0 0 NA NA NA 17 12 12 22.72 6.26 93.7 0 2 3 Whitelist UCEC-US 0.62 0.51 0 0 0.59 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 4 92341870 169784344 1 5 315 0 5 0 0 0 0 0 10 0 0 10 10 10 12 11 11 22.72 25.98 71.66 0 2 3 Whitelist UCEC-US 0.1 0 0 0 0.07 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 5 173279748 174571298 8 15 315 3 3 1 1 7 0.57 0 5 0 0 5 3 5 33 13 26 22.72 5.99 93.85 0 4 3 Whitelist UCEC-US 7 0.85 0 0 0 0.64 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 23 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 6 6931110 166548418 1 17 315 0 12 0 1 4 0 1 23 0 0 23 20 20 24 20 20 22.72 2.62 97.22 0 2 3 Whitelist UCEC-US 0.02 1 0 0 0 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 30 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 7 2946538 51699223 2 3 315 0 1 1 0 1 0.57 0.45 13 0 0 13 10 13 24 12 12 22.72 21.59 78.19 0 2 3 Whitelist UCEC-US 0.87 0.7 0 0 0.64 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 8 14486767 121025060 2 4 315 0 0 1 1 2 0.57 0.25 18 0 0 18 12 18 23 13 23 22.72 6.37 93.63 0 2 3 Whitelist UCEC-US 1 0.49 0 0 0.64 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 9 24304762 112075979 1 4 315 0 4 0 0 0 0.01 0.08 9 0 0 9 3 9 12 4 4 22.72 63.56 33.9 0 2 3 Whitelist UCEC-US 0.21 0.23 0 0 0.16 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 10 294814 131732983 1 13 315 0 11 0 1 1 0 1 23 0 0 23 11 11 24 11 11 22.72 31.68 68.15 0 3 2 Whitelist UCEC-US 0.01 1 0 0 0 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 25 0.04 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 11 57156528 60064403 8 10 315 3 3 1 1 2 0.57 0 13 0 0 13 0 3 38 6 6 22.72 7.01 92.56 16 7 11 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 12 24679746 80152939 3 10 315 0 1 1 1 7 0.8 0.28 14 0 0 14 12 14 21 16 18 22.72 7.17 92.75 0 3 2 Whitelist UCEC-US 0.68 0.53 0 0 0.84 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 False positive; manually removed UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 13 40325932 76745081 1 3 315 0 3 0 0 0 0.03 0.01 4 0 0 4 4 4 5 5 5 22.72 0.26 99.74 0 2 3 Whitelist UCEC-US 0.41 0.05 0 0 0.33 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 14 20605599 104501379 1 9 315 0 8 0 0 1 0 0.52 19 0 0 19 10 10 20 11 11 22.72 6.19 92.9 0 2 3 Whitelist UCEC-US 0 0.76 0 0 0 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 15 71512475 90803638 1 2 315 0 2 0 0 0 0.11 0.01 4 NA 0 4 4 4 6 5 6 22.72 92.94 2.18 0 1 2 Whitelist UCEC-US 0.54 0.06 NA 0 0.48 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 16 1799442 90000381 1 9 315 0 6 0 0 3 0 0.6 16 0 0 16 6 16 18 7 7 22.72 28.77 70.74 0 2 3 Whitelist UCEC-US 0.41 0.81 0 0 0.03 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 17 35162507 78407459 13 16 315 5 4 3 1 3 0.44 0 39 0 0 39 8 13 55 8 11 22.72 84.24 10.84 8 3 4 Whitelist UCEC-US 0.79 0 0 0 0.64 0 High confidence UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA With other complex events 29 0.05 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 18 21859294 52417169 1 7 315 0 5 0 1 1 0.01 0.86 12 0 0 12 8 12 12 8 8 22.72 44.66 55.31 0 3 4 Whitelist UCEC-US 0.47 0.99 0 0 0.19 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 19 19164001 19766700 1 1 315 0 1 0 0 0 0.39 0.15 2 0 NA NA NA NA 7 3 3 22.72 35.36 64.2 0 4 6 Whitelist UCEC-US 0.62 0.35 0 NA 0.59 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 20 13546690 56192547 1 5 315 0 5 0 0 0 0 1 8 0 0 8 5 8 11 5 11 22.72 1.9 97.37 0 2 3 Whitelist UCEC-US 0.1 1 0 0 0.07 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 21 45364346 45773130 1 3 315 0 1 0 0 2 0.39 1 2 NA 0 NA NA NA NA NA NA 22.72 0.85 76.5 0 2 3 Whitelist UCEC-US 12 0.87 1 NA 0 0.59 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 22 23956291 24160109 2 2 315 0 2 0 0 0 0.11 0 1 0 0 NA NA NA 10 4 4 22.72 13.28 86.72 0 3 NA Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 X 12026874 154524683 1 8 315 1 5 0 0 2 0.01 0.16 10 0 0 10 3 5 10 3 3 22.72 99.26 0.51 0 1 2 Whitelist UCEC-US 0.28 0.36 0 0 0.19 0 No UCEC-US af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 UCEC 0.89 1.95 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577538_T_C,CN:1 2 UCEC-US DO43378 TCGA-AP-A053 af37d8f0-fea0-47f6-be0a-2fb55a5da5c4 female alive C54.1 90 NA 18 NA Included Uterus-AdenoCA UCEC US 0 0.59 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 1 63876263 175006578 2 11 353 0 0 1 1 9 0.57 0.07 6 0 0 6 3 4 25 8 8 31.65 23.41 76.59 5 2 3 Whitelist UCEC-US 5 0.87 0.22 0 0 0.64 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 2 141574202 142615162 5 5 353 5 0 0 0 0 0 0 6 0 0 6 3 4 42 9 15 31.65 20.35 79.55 0 2 0 Whitelist UCEC-US 0.1 0.02 0 0 0.07 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 3 122528982 122709773 2 2 353 0 2 0 0 0 0.11 0.75 2 0 0 NA NA NA 25 10 15 31.65 26.92 73.05 0 2 3 Whitelist UCEC-US 0.54 0.92 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 4 25298330 181912599 1 10 353 3 5 0 0 2 0.03 0.52 8 0 0 8 5 7 11 5 5 31.65 0.67 99.31 1 2 1 Whitelist UCEC-US 0.3 0.76 0 0 0.33 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 5 57776569 155266172 1 14 353 6 4 0 0 4 0.01 0.23 14 0 0 14 5 9 16 5 5 31.65 72.46 24.89 2 1 2 Whitelist UCEC-US 0.33 0.46 0 0 0.23 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 24 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 6 526786 163011572 1 15 353 3 6 1 1 4 0.11 0.74 7 0 0 7 7 7 8 7 7 31.65 0.6 99.16 0 2 3 Whitelist UCEC-US 0.62 0.91 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 26 0.04 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 7 18150081 149051923 1 14 353 2 4 0 0 8 0.06 0.16 10 0 0 10 4 8 25 4 8 31.65 90.27 6.72 0 1 2 Whitelist UCEC-US X 0.98 0.36 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 20 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 8 115133893 131907004 3 9 353 1 1 0 1 6 0.8 0.07 6 0 0 6 3 5 18 4 4 31.65 75.87 24.12 0 3 2 Whitelist UCEC-US 0.85 0.2 0 0 0.84 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 9 28688622 29063821 4 4 353 4 0 0 0 0 0.01 1 3 0 0 NA NA NA 6 4 6 31.65 49.92 49.37 0 2 1 Whitelist UCEC-US 0.21 1 0 0 0.16 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 10 1584891 84489744 4 7 353 1 3 0 0 3 0.11 0.16 8 0 0 8 3 4 12 4 4 31.65 15.4 84.42 0 2 1 Whitelist UCEC-US 0.54 0.37 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 11 60949498 62133223 2 2 353 0 0 1 1 0 0.57 0.7 3 0 0 NA NA NA 10 3 6 31.65 38.38 57.53 0 2 3 Whitelist UCEC-US 0.68 0.9 0 0 0.64 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 12 4347137 85863796 12 17 353 4 5 3 0 5 0.2 0.02 19 0 0 19 7 11 19 7 9 31.65 48.21 51.77 0 2 1 Whitelist UCEC-US 0.77 0.09 0 0 0.59 1 High confidence UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA With other complex events 29 0.04 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 13 41900868 106384874 1 5 353 0 5 0 0 0 0 1 8 0 0 8 5 8 13 5 9 31.65 24.38 61.47 1 2 3 Whitelist UCEC-US 0.1 1 0 0 0.07 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 14 49786307 50379250 2 2 353 0 2 0 0 0 0.11 0.76 2 0 0 NA NA NA 13 8 11 31.65 63.04 21.04 0 1 2 Whitelist UCEC-US 0.54 0.92 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 15 52941063 75115195 1 6 353 0 3 0 0 3 0.03 1 3 0 0 NA NA NA NA NA NA 31.65 0.3 84.29 0 2 1 Whitelist UCEC-US 0.68 1 0 0 0.33 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 16 24650649 72046828 1 3 353 0 2 0 0 1 0.11 0.74 6 0 0 6 4 6 8 4 8 31.65 20.36 74.16 1 2 1 Whitelist UCEC-US 0.62 0.91 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 17 1791278 78108342 1 16 353 0 6 0 1 9 0 0 11 0 0 11 4 4 11 4 4 31.65 35.91 64.07 0 1 2 Whitelist UCEC-US 0.54 0.02 0 0 0.09 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 23 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 18 22426168 31874157 3 4 353 2 1 0 0 1 0.3 0.24 8 0 0 8 3 8 16 4 9 31.65 75.67 19.69 0 6 4 Whitelist UCEC-US 0.68 0.48 0 0 0.59 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 19 12718468 44715346 9 11 353 2 0 4 3 2 0.27 0 10 0 0 10 6 10 19 7 7 31.65 20.66 71.07 0 2 1 Whitelist UCEC-US 0.74 0.02 0 0 0.59 1 Low confidence UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA Canonical without polyploidization 20 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 20 50425720 50669890 1 1 353 0 1 0 0 0 0.39 0.58 2 0 NA NA NA NA 6 5 5 31.65 16.63 82.48 0 1 2 Whitelist UCEC-US 0.62 0.8 0 NA 0.59 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 21 25438765 25456113 1 1 353 1 0 0 0 0 0.39 1 2 NA NA NA NA NA 5 5 5 31.65 0.18 77.17 0 1 2 Whitelist UCEC-US 0.62 1 NA NA 0.59 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 22 32123607 39142865 1 3 353 0 2 0 0 1 0.11 0.08 3 0 0 NA NA NA 8 3 4 31.65 15.61 60.61 0 1 2 Whitelist UCEC-US 0.62 0.22 0 0 0.48 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::b60f22ac-a659-4f33-b01d-820e86a9a5c9 X 13830264 127543445 1 14 353 5 2 0 0 7 0.02 0.72 5 0 0 5 5 5 5 5 5 31.65 1.64 98.13 1 2 3 Whitelist UCEC-US 0.49 0.9 0 0 0.33 1 No UCEC-US b60f22ac-a659-4f33-b01d-820e86a9a5c9 UCEC 0.84 1.87 Uterus-AdenoCA NA 21 0.03 nonsynonymous_SNV,17_7577536_A_T,CN:1 2 UCEC-US DO41943 TCGA-B5-A0JN b60f22ac-a659-4f33-b01d-820e86a9a5c9 female alive C54.1 84 NA 2068 NA Included Uterus-AdenoCA UCEC US 0 68.03 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 1 1127335 152612348 6 20 315 1 4 1 0 14 0.11 0 32 0 0 32 6 7 48 6 12 21.62 34.54 62.41 2 2 3 Whitelist UCEC-US 12 0.96 0 0 0 0.48 1 Linked to high confidence UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA With other complex events 26 0.04 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 2 63989302 64670166 3 3 315 0 1 1 1 0 0.8 0.22 3 0 0 NA NA NA 14 6 7 21.62 5.42 94.46 0 2 3 Whitelist UCEC-US 0.87 0.45 0 0 0.84 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 6 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 3 176924696 177589672 2 2 315 0 0 1 1 0 0.57 0.22 2 0 0 NA NA NA 10 5 5 21.62 18.3 81.65 0 3 4 Whitelist UCEC-US 0.68 0.46 0 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 4 181763491 182178300 2 2 315 2 0 0 0 0 0.11 0.04 5 0 0 5 5 5 19 7 7 21.62 4.92 92.5 0 1 2 Whitelist UCEC-US 0.54 0.14 0 0 0.48 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 5 20370907 93004697 4 5 315 0 0 2 2 1 0.26 0.06 13 0 0 13 7 13 29 7 7 21.62 32.73 64.58 0 2 1 Whitelist UCEC-US 0.68 0.19 0 0 0.59 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 9 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 6 42773558 154331741 16 24 315 3 5 2 6 8 0.48 0 42 0 0 42 13 18 53 13 18 21.62 46.38 53.48 0 4 3 Whitelist UCEC-US 1 0.68 0 0 0 0.64 1 High confidence UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA With other complex events 40 0.06 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 7 134027176 134391780 3 3 315 0 0 1 2 0 0.3 0.02 2 0 0 NA NA NA 16 4 6 21.62 2.67 97.1 0 2 3 Whitelist UCEC-US 0.62 0.07 0 0 0.59 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 6 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 8 9582632 90937548 1 4 315 1 1 0 0 2 0.57 0 16 0.02 0 16 7 10 31 7 7 21.62 86.41 9.6 0 3 4 Whitelist UCEC-US 0.68 0 0.02 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 6 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 9 NA NA 0 0 315 0 0 0 0 0 NA 0 NA NA NA NA NA NA 4 3 3 0 0 0 0 0 0 Whitelist UCEC-US NA 0.02 NA NA NA 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 10 6602691 119658737 1 12 315 1 5 1 0 5 0.04 0.79 7 0 0 7 3 7 10 4 4 21.62 0.91 98.91 1 2 3 Whitelist UCEC-US 0.62 0.94 0 0 0.38 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 19 0.03 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 11 65699452 118373079 4 4 315 0 2 1 1 0 0.57 0.89 15 0 0 15 7 9 19 7 9 21.62 10.05 89.53 0 2 3 Whitelist UCEC-US 0.68 1 0 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 8 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 12 50347854 124093363 1 20 315 2 7 2 1 8 0.06 0.06 11 0 0 11 5 7 15 7 9 21.62 2.5 93.76 1 2 3 Whitelist UCEC-US 1 0.54 0.19 0 0 0.48 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 32 0.05 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 13 44617535 73224366 1 2 315 0 1 1 0 0 0.57 0.03 2 0 0 NA NA NA 4 3 3 21.62 24.5 72.72 0 2 3 Whitelist UCEC-US 0.68 0.11 0 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 14 102362277 102416431 1 1 315 0 1 0 0 0 0.39 0.01 1 NA NA NA NA NA NA NA NA 21.62 0 99.09 0 2 NA Whitelist UCEC-US 0.62 0.03 NA NA 0.59 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 2 0 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 15 52201819 90569531 1 4 315 1 3 0 0 0 0.11 0.49 4 0 0 4 3 4 6 3 3 21.62 16.07 79.02 0 2 0 Whitelist UCEC-US 0.54 0.73 0 0 0.48 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 8 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 16 57094750 57546553 3 4 315 0 1 1 1 1 0.8 0 2 0 0 NA NA NA 29 7 7 21.62 44.06 55.93 0 3 4 Whitelist UCEC-US 0.68 0 0 0 0.84 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 7 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 17 36816085 74685847 7 13 315 3 2 1 1 6 0.67 0 38 0 0 38 5 9 44 5 9 21.62 77.38 22.61 2 3 4 Whitelist UCEC-US 0.68 0 0 0 0.74 1 Low confidence UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA With other complex events 20 0.03 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 18 71784337 72254402 1 1 315 0 1 0 0 0 0.39 0.73 1 0 NA NA NA NA 8 3 5 21.62 5.22 89.99 0 3 NA Whitelist UCEC-US 1 0.62 0.9 0 NA 0.59 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 2 0 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 19 29612166 33943891 2 2 315 0 2 0 0 0 0.11 0 5 0 0 5 3 4 21 4 7 21.62 66.6 26.12 0 4 2 Whitelist UCEC-US 0.54 0.01 0 0 0.48 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 20 8943480 62785660 1 6 315 1 2 0 0 3 0.3 1 6 0 0 6 4 6 7 5 7 21.62 2.23 97.35 1 2 3 Whitelist UCEC-US 17 0.62 1 0 0 0.59 1 Linked to low confidence UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA Canonical without polyploidization 9 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 21 32428088 32503886 1 1 315 0 1 0 0 0 0.39 0.2 1 NA NA NA NA NA NA NA NA 21.62 0 77.35 0 2 NA Whitelist UCEC-US 0.62 0.42 NA NA 0.59 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 2 0 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba 22 30102097 32411940 1 2 315 0 0 1 1 0 0.57 0.01 2 0 0 NA NA NA 4 3 3 21.62 28.05 59.98 0 2 4 Whitelist UCEC-US 0.68 0.06 0 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bad34c92-1e64-4187-a0b4-061105fd13ba X 94223968 96142000 1 2 315 1 1 0 0 0 0.57 0 4 0 0 4 3 4 5 3 3 21.62 0.09 99.68 0 2 0 Whitelist UCEC-US 0.68 0.02 0 0 0.64 1 No UCEC-US bad34c92-1e64-4187-a0b4-061105fd13ba UCEC 0.78 2.01 Uterus-AdenoCA NA 4 0.01 NA 2 UCEC-US DO43338 TCGA-AX-A1C8 bad34c92-1e64-4187-a0b4-061105fd13ba female alive C54.1 77 NA 412 NA Included Uterus-AdenoCA UCEC US 0 13.55 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 1 16609046 19276795 4 4 199 0 1 1 2 0 0.57 0 5 0 0 5 3 5 42 10 13 16.4 11.82 88.18 0 2 3 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 2 58807629 59442589 2 2 199 1 1 0 0 0 0.57 0.07 2 0 0 NA NA NA 35 6 6 16.4 3.74 96.16 0 2 3 Whitelist UCEC-US 0.68 0.21 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 3 60986489 85883621 10 10 199 4 1 2 3 0 0.57 0 6 0 0 6 6 6 33 16 18 16.4 44.78 52.09 0 1 2 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 4 20563255 106761682 1 6 199 1 1 0 0 4 0.57 0.03 7 0 0 7 4 7 8 4 4 16.4 61.46 38.52 0 1 2 Whitelist UCEC-US 11 0.93 0.12 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 5 54167114 157598665 1 9 199 0 5 0 0 4 0 0.38 16 0 0 16 16 16 17 17 17 16.4 1.67 98.21 0 2 3 Whitelist UCEC-US 0.48 0.63 0 0 0.07 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 6 134298142 134709988 2 2 199 0 2 0 0 0 0.11 0.66 2 0 0 NA NA NA 16 7 7 16.4 1.54 98.33 0 2 3 Whitelist UCEC-US 0.54 0.86 0 0 0.48 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 7 49848 121715218 1 4 199 0 2 0 0 2 0.11 0.16 8 0 0 8 8 8 10 10 10 16.4 1.55 98.22 0 2 3 Whitelist UCEC-US 10 0.54 0.36 0 0 0.48 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 8 28885524 129643944 1 6 199 0 4 0 0 2 0.01 0.26 12 0 0 12 12 12 13 13 13 16.4 1.66 98.33 0 2 3 Whitelist UCEC-US 0.25 0.5 0 0 0.16 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 9 126339213 133289984 1 2 199 0 2 0 0 0 0.11 0.85 4 0 0 4 4 4 16 7 9 16.4 1.64 98.25 0 2 3 Whitelist UCEC-US 0.54 0.99 0 0 0.48 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 10 114990776 115760766 3 3 199 1 2 0 0 0 0.3 0.18 4 0 0 4 4 4 20 9 9 16.4 10.86 88.95 0 2 3 Whitelist UCEC-US 0.62 0.39 0 0 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 11 47270781 76364853 2 17 199 0 1 1 0 15 0.57 0 19 0 0 19 11 17 30 11 11 16.4 6.93 89.3 0 2 3 Whitelist UCEC-US 0.99 0 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 19 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 12 53267240 108987776 2 7 199 0 1 0 1 5 0.57 0.06 11 0 0 11 3 11 20 4 4 16.4 7.64 92.34 0 3 2 Whitelist UCEC-US 14_5 0.96 0.2 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 13 NA NA 0 0 199 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 14 39481218 54506226 1 2 199 0 1 0 1 0 0.57 0.54 4 0 0 4 4 4 7 7 7 16.4 1.48 97.61 0 2 3 Whitelist UCEC-US 0.68 0.77 0 0 0.64 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 15 40473182 65970292 1 5 199 0 3 0 0 2 0.03 0.83 6 0 0 6 6 6 8 7 8 16.4 58.27 36.95 0 1 2 Whitelist UCEC-US 0.62 0.97 0 0 0.33 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 16 11701115 77869395 1 8 199 2 3 0 0 3 0.14 0.05 16 0 0 16 5 7 17 5 5 16.4 93.62 1.86 1 1 2 Whitelist UCEC-US 17 0.54 0.16 0 0 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 17 43852706 73865893 2 9 199 1 3 0 0 5 0.11 0 21 0 0 21 8 14 31 8 8 16.4 34.03 65.97 0 2 3 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 18 30327604 75702754 1 7 199 2 1 0 0 4 0.3 0.38 10 0 0 10 5 10 11 5 5 16.4 2.28 97.66 0 2 3 Whitelist UCEC-US 0.62 0.63 0 0 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 19 13639308 48667644 1 11 199 2 3 0 1 5 0.34 0 18 0 0 18 6 6 21 7 10 16.4 49.99 42.74 0 3 2 Whitelist UCEC-US 17 0.98 0 0 0 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 17 0.04 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 20 35195700 35791052 1 1 199 0 1 0 0 0 0.39 0.8 2 NA NA NA NA NA 5 5 5 16.4 1.05 97.97 0 2 3 Whitelist UCEC-US 0.62 0.95 NA NA 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 21 34416859 34725778 1 1 199 0 1 0 0 0 0.39 0.74 2 NA NA NA NA NA NA NA NA 16.4 8.38 68.97 0 1 2 Whitelist UCEC-US 0.62 0.91 NA NA 0.59 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 22 NA NA 0 0 199 0 0 0 0 0 NA 0.03 NA 0 NA NA NA NA 10 9 9 0 0 0 0 0 0 Whitelist UCEC-US NA 0.12 0 NA NA 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::bd4284a7-260d-48b3-9b48-a1c578c30d27 X 32845396 35493761 1 2 199 2 0 0 0 0 0.11 0.01 4 NA 0 4 4 4 5 5 5 16.4 0.57 99.2 0 1 2 Whitelist UCEC-US 0.54 0.03 NA 0 0.48 0 No UCEC-US bd4284a7-260d-48b3-9b48-a1c578c30d27 UCEC 0.83 1.91 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:1 2 UCEC-US DO42881 TCGA-AP-A052 bd4284a7-260d-48b3-9b48-a1c578c30d27 female deceased C54.1 59 669 NA NA Included Uterus-AdenoCA UCEC US 1 22.01 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 1 1026756 234895003 1 6 188 0 4 0 0 2 0.01 0.03 12 0.22 0 12 5 10 13 5 11 68.41 99.76 0 78 3 5 Whitelist UCEC-US 0.54 0.11 0.23 0 0.16 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 10 0.03 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 2 174735622 174952057 2 2 188 0 0 1 1 0 0.57 0 5 0 0 5 3 5 38 4 11 68.41 99.9 0.02 10 5 6 Whitelist UCEC-US 0.68 0.02 0 0 0.64 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 3 69221094 169659863 2 8 188 0 2 2 2 2 0.57 0.57 14 0 0 14 4 10 21 7 13 68.41 95.56 4.3 24 4 6 Whitelist UCEC-US 0.87 0.79 0 0 0.64 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 4 25391210 25523657 1 1 188 0 1 0 0 0 0.39 0 2 NA NA NA NA NA 7 3 7 68.41 30.22 67.42 0 3 4 Whitelist UCEC-US 0.62 0.01 NA NA 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 5 2713949 26208740 3 3 188 0 1 2 0 0 0.3 0.23 13 0 0 13 5 6 30 5 11 68.41 97.33 0 11 6 8 Whitelist UCEC-US 0.62 0.46 0 0 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 6 25753025 138823617 4 5 188 0 2 1 1 1 0.57 0 28 0 0 28 7 13 44 7 9 68.41 82.96 14.12 29 5 6 Whitelist UCEC-US 0.93 0 0 0 0.64 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 7 19208406 127268598 1 11 188 0 5 0 2 4 0.02 0.14 30 0 0 30 5 8 31 5 8 68.41 99.78 0 31 3 6 Whitelist UCEC-US X 0.54 0.34 0 0 0.33 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 18 0.05 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 8 38992096 135350344 1 12 188 4 4 0 0 4 0.05 0.4 19 0 0 19 9 19 19 9 19 68.41 69.47 27.11 13 3 4 Whitelist UCEC-US 0.62 0.65 0 0 0.46 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 9 4056303 133054804 1 10 188 0 7 0 0 3 0 0.18 21 0 0 21 5 11 22 5 11 68.41 72.24 25.2 42 4 2 Whitelist UCEC-US 0.07 0.4 0 0 0.01 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 17 0.05 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 10 35127698 129062141 1 8 188 1 4 1 0 2 0.11 0.08 17 0 0 17 9 10 19 9 9 68.41 68.11 31.75 29 6 4 Whitelist UCEC-US 0.62 0.22 0 0 0.48 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 14 0.04 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 11 46742503 131000198 1 5 188 0 4 0 0 1 0.01 0.23 10 0 0 10 10 10 11 11 11 68.41 9.29 86.51 11 2 4 Whitelist UCEC-US 0.45 0.46 0 0 0.16 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 12 72010800 130394852 1 4 188 0 4 0 0 0 0.01 1 8 0 0 8 5 8 15 5 9 68.41 77.74 18.58 11 3 5 Whitelist UCEC-US 0.21 1 0 0 0.16 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 13 73596426 73862052 2 2 188 0 2 0 0 0 0.11 0.84 4 0 0 4 3 4 16 4 6 68.41 100 0 0 7 5 Whitelist UCEC-US 0.54 0.98 0 0 0.48 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 14 28081228 69397300 1 3 188 0 3 0 0 0 0.03 0.3 6 0 0 6 6 6 8 7 8 68.41 2.45 97.12 5 2 4 Whitelist UCEC-US 0.41 0.54 0 0 0.33 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 15 77874990 78062222 1 1 188 0 1 0 0 0 0.39 0.5 2 NA NA NA NA NA 8 3 5 68.41 33.34 66.56 0 3 4 Whitelist UCEC-US 0.62 0.74 NA NA 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 16 32589538 73128552 1 3 188 0 2 0 1 0 0.3 0.36 4 0 0 4 3 4 8 5 6 68.41 38.39 56.31 9 2 3 Whitelist UCEC-US 0.62 0.61 0 0 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 17 1138706 72760249 1 13 188 0 7 0 0 6 0 0 20 0 0 20 5 7 21 5 7 68.41 74.68 20.46 37 5 4 Whitelist UCEC-US 0.6 0.01 0 0 0.01 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 20 0.05 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 18 NA NA 0 0 188 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 19 35399812 58812700 1 3 188 0 3 0 0 0 0.03 0.19 3 0 0 NA NA NA 10 4 4 68.41 99.29 0 3 6 4 Whitelist UCEC-US 0.41 0.41 0 0 0.33 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 20 17966783 52443133 1 5 188 0 2 1 1 1 0.57 0.31 9 0 0 9 5 8 10 5 5 68.41 99.03 0 10 6 8 Whitelist UCEC-US 0.62 0.55 0 0 0.64 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 21 44630733 44993191 1 1 188 0 1 0 0 0 0.39 0.73 2 NA NA NA NA NA 4 3 3 68.41 77.35 0 0 4 6 Whitelist UCEC-US 0.62 0.91 NA NA 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 22 40177225 40461129 1 1 188 0 1 0 0 0 0.39 0.49 2 NA NA NA NA NA NA NA NA 68.41 100 0 0 5 8 Whitelist UCEC-US 0.62 0.74 NA NA 0.59 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c10b2885-70ea-4d32-bc48-8b85530df702 X 5710143 36328809 1 3 188 0 3 0 0 0 0.03 1 6 0 0 6 4 6 15 5 9 68.41 39.43 57.18 7 4 5 Whitelist UCEC-US 0.41 1 0 0 0.33 0 No UCEC-US c10b2885-70ea-4d32-bc48-8b85530df702 UCEC 0.82 3.58 Uterus-AdenoCA NA 6 0.02 nonsynonymous_SNV,17_7577106_T_G,CN:2 3 UCEC-US DO43162 TCGA-EY-A1GS c10b2885-70ea-4d32-bc48-8b85530df702 female alive C54.1 71 NA 284 NA Included Uterus-AdenoCA UCEC US 0 9.34 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 1 155027849 226839940 2 12 278 0 2 1 1 8 0.57 0 20 0 0 20 8 15 46 23 26 17.09 18.99 81.01 0 3 4 Whitelist UCEC-US 0.62 0 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 2 68246324 234694543 2 13 278 0 5 1 0 7 0.01 1 20 0 0 20 10 14 29 10 10 17.09 38.32 61.58 0 2 3 Whitelist UCEC-US 1_11 0.62 1 0 0 0.19 1 Linked to high confidence UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA With other complex events 19 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 3 13596130 50327167 2 16 278 0 4 0 0 12 0.01 0.13 18 0 0 18 4 5 25 5 11 17.09 2.15 97.75 1 3 4 Whitelist UCEC-US 0.95 0.32 0 0 0.16 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 20 0.04 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 4 6530345 182879938 1 4 278 2 2 0 0 0 0.26 0 8 0.13 0 8 4 8 11 4 4 17.09 0.96 98.86 0 2 3 Whitelist UCEC-US 0.62 0 0.13 0 0.59 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 5 55514960 132382598 1 9 278 2 2 1 0 4 0.53 0.03 11 0 0 11 6 8 12 7 7 17.09 2.15 97.73 0 2 3 Whitelist UCEC-US 0.68 0.12 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 6 10895708 158656055 1 10 278 0 6 0 2 2 0.01 0.61 17 0 0 17 7 16 19 7 16 17.09 10.05 86.91 1 2 3 Whitelist UCEC-US 0.06 0.83 0 0 0.16 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 7 39301062 39887704 4 4 278 0 1 2 1 0 0.57 0.79 3 0 0 NA NA NA 18 9 11 17.09 1.7 98.07 0 2 3 Whitelist UCEC-US 0.68 0.94 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 8 37668359 39057419 2 2 278 0 0 1 1 0 0.57 0.1 3 0 0 NA NA NA 9 4 4 17.09 68.07 28.5 0 2 3 Whitelist UCEC-US 0.68 0.27 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 9 114328263 116161308 1 2 278 0 2 0 0 0 0.11 1 4 0 0 4 4 4 9 9 9 17.09 1.8 97.5 0 2 3 Whitelist UCEC-US 0.54 1 0 0 0.48 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 10 61491986 123288547 1 10 278 0 5 1 0 4 0.01 1 16 0 0 16 8 10 17 9 11 17.09 2.76 97.06 0 2 3 Whitelist UCEC-US 0.54 1 0 0 0.19 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 11 59618659 129738667 3 9 278 2 1 0 0 6 0.3 0.25 8 0 0 8 8 8 16 11 11 17.09 36.29 63.15 0 2 3 Whitelist UCEC-US 15_2 0.62 0.49 0 0 0.59 1 High confidence UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA Canonical without polyploidization 12 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 12 50234295 123592127 1 11 278 1 7 0 0 3 0 1 17 0 0 17 10 10 20 10 10 17.09 3.87 96.05 0 3 2 Whitelist UCEC-US 0.13 1 0 0 0.04 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 19 0.03 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 13 22776277 23343356 1 3 278 2 1 0 0 0 0.3 0.07 6 0 0 6 3 6 7 3 3 17.09 0.49 99.51 0 4 5 Whitelist UCEC-US 0.62 0.21 0 0 0.59 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 14 77146753 77720232 2 7 278 1 1 0 0 5 0.57 0.08 5 0 0 5 0 4 11 6 6 17.09 5.09 94.91 0 3 2 Whitelist UCEC-US 1_15 0.62 0.23 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 15 40483864 102277236 1 19 278 1 7 1 0 10 0 0 20 0 0 20 20 20 21 21 21 17.09 3.75 96.15 0 2 3 Whitelist UCEC-US 1_11 0.51 0 0 0 0.11 1 Linked to high confidence UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA Canonical without polyploidization 28 0.05 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 16 57206007 89839940 1 5 278 0 5 0 0 0 0 0.46 12 0 0 12 9 12 15 9 9 17.09 24.19 75.15 0 2 1 Whitelist UCEC-US 0.1 0.7 0 0 0.07 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 17 37643389 46968340 13 27 278 4 3 3 3 14 0.97 0 15 0 0 15 3 3 23 6 6 17.09 87.17 7.51 0 1 2 Whitelist UCEC-US 0.7 0 0 0 0.98 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 40 0.07 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 18 3932535 46438081 1 7 278 0 2 1 0 4 0.3 0.57 7 0 0 7 7 7 9 7 9 17.09 6.3 93.68 0 2 3 Whitelist UCEC-US 0.62 0.8 0 0 0.59 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 19 18599359 18689404 3 9 278 1 1 1 0 6 0.8 0 8 0 0 8 4 6 23 4 9 17.09 58.35 41.48 0 3 4 Whitelist UCEC-US 1 0.62 0 0 0 0.84 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 20 48736211 61004987 2 4 278 1 2 1 0 0 0.57 0 6 0 0 6 3 4 24 6 11 17.09 48.86 43.4 0 3 4 Whitelist UCEC-US 0.68 0 0 0 0.64 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 21 NA NA 0 0 278 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f 22 23905849 50308979 2 5 278 0 0 2 2 1 0.26 0.01 13 0 0 13 9 9 16 12 12 17.09 19.64 79.68 0 3 2 Whitelist UCEC-US 0.68 0.03 0 0 0.59 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c350b53b-3c27-4b9e-8b57-d7b6a1205a1f X 37841941 113114911 1 4 278 1 2 0 0 1 0.3 0.05 6 0 0 6 4 6 8 5 5 17.09 14.63 85.14 0 2 3 Whitelist UCEC-US 0.68 0.17 0 0 0.59 1 No UCEC-US c350b53b-3c27-4b9e-8b57-d7b6a1205a1f UCEC 0.93 2.08 Uterus-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7578235_C_T,CN:1 2 UCEC-US DO41530 TCGA-AP-A05A c350b53b-3c27-4b9e-8b57-d7b6a1205a1f female alive C54.1 81 NA 1199 NA Included Uterus-AdenoCA UCEC US 0 39.44 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 1 15758374 155634629 35 51 382 7 9 9 10 16 0.91 0 42 0 0 42 15 24 57 15 24 27.05 12.98 87.02 1 2 3 Whitelist UCEC-US 16_9 0.87 0 0 0 0.93 1 High confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA With other complex events 86 0.11 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 2 73786568 74416423 7 7 382 1 2 2 2 0 0.93 0.01 4 0 0 4 0 3 14 5 6 27.05 1.1 98.8 0 2 3 Whitelist UCEC-US 0.96 0.06 0 0 0.95 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 3 22879647 26075859 2 2 382 0 1 1 0 0 0.57 0.92 4 0 0 4 3 4 29 5 6 27.05 76.68 20.26 0 2 1 Whitelist UCEC-US 0.68 1 0 0 0.64 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 4 12527784 183503861 1 11 382 5 1 1 0 4 0.04 0.08 13 0 0 13 5 6 15 5 6 27.05 14.85 85.14 0 2 3 Whitelist UCEC-US 9 0.68 0.23 0 0 0.38 1 Linked to high confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA With other complex events 18 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 5 36137983 36881221 3 4 382 1 1 1 0 1 0.8 0.06 4 0 0 4 3 4 21 7 7 27.05 20.7 79.17 0 2 1 Whitelist UCEC-US 0.68 0.18 0 0 0.84 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 6 43109161 43737435 3 3 382 0 1 1 1 0 0.8 0.16 3 0 0 NA NA NA 23 5 5 27.05 2.03 97.82 0 2 3 Whitelist UCEC-US 0.87 0.37 0 0 0.84 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 7 44704759 148485339 1 10 382 1 4 0 0 5 0.04 0.09 8 0 0 8 8 8 11 11 11 27.05 5.91 93.87 0 2 3 Whitelist UCEC-US 8 0.3 0.25 0 0 0.36 1 Linked to low confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA Canonical without polyploidization 15 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 8 51305779 141554762 31 45 382 6 8 8 9 14 0.89 0 78 0 0 78 6 7 86 6 7 27.05 91.3 5.05 5 3 7 Whitelist UCEC-US 16_7 0.92 0 0 0 0.92 1 Low confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA With other complex events 76 0.1 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 9 4958551 22449068 4 8 382 2 0 2 4 0 0.26 0.6 12 0 0 12 10 12 23 11 11 27.05 33.39 66.44 0 2 3 Whitelist UCEC-US 0.62 0.81 0 0 0.59 1 High confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA Canonical without polyploidization 16 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 10 78887765 127475133 4 9 382 0 2 1 1 5 0.57 0.54 11 0 0 11 6 6 14 7 9 27.05 2.09 97.74 0 2 3 Whitelist UCEC-US 17 0.85 0.77 0 0 0.64 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 13 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 11 13036080 13261863 2 2 382 0 0 1 1 0 0.57 0.54 3 0 0 NA NA NA 19 6 7 27.05 48.43 51.14 0 3 4 Whitelist UCEC-US 0.68 0.77 0 0 0.64 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 12 46317944 47024103 5 10 382 1 2 1 1 5 0.9 0.07 2 0 0 NA NA NA 22 12 19 27.05 23.49 76.43 0 2 3 Whitelist UCEC-US 0.96 0.2 0 0 0.92 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 15 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 13 44789536 114042028 1 7 382 0 3 0 0 4 0.03 0.09 7 0 0 7 5 7 8 6 6 27.05 15.77 84.23 0 3 2 Whitelist UCEC-US 0.62 0.25 0 0 0.33 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 10 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 14 69302257 69625757 3 3 382 0 1 1 1 0 0.8 0.77 3 0 0 NA NA NA 14 5 7 27.05 7.8 91.29 0 2 4 Whitelist UCEC-US 0.87 0.93 0 0 0.84 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 15 58913990 59344743 1 1 382 0 1 0 0 0 0.39 0.21 2 0 NA NA NA NA 10 9 9 27.05 12.74 87.16 0 2 3 Whitelist UCEC-US 0.62 0.44 0 NA 0.59 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 16 46736458 70526639 3 3 382 1 1 0 1 0 0.8 0.02 5 0 0 5 5 5 16 9 11 27.05 96.99 2.97 0 2 1 Whitelist UCEC-US 0.87 0.09 0 0 0.84 1 Linked to high confidence UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA Canonical without polyploidization 6 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 17 26445449 73298015 2 8 382 1 1 1 1 4 1 0.27 13 0 0 13 6 8 20 6 8 27.05 87.12 12.88 0 1 2 Whitelist UCEC-US 0.87 0.51 0 0 1 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 18 2675490 2858546 1 1 382 1 0 0 0 0 0.39 0.01 2 0 NA NA NA NA 13 3 4 27.05 30.27 64.63 0 2 4 Whitelist UCEC-US 0.62 0.03 0 NA 0.59 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 19 28965812 33731409 7 19 382 1 5 1 0 12 0.04 0 23 0 0 23 3 4 40 8 8 27.05 82.82 9.28 18 3 4 Whitelist UCEC-US 22 0.62 0 0 0 0.38 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 26 0.03 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 20 17366488 61378076 1 10 382 1 5 0 1 3 0.04 0.21 14 0 0 14 7 9 16 7 9 27.05 3.83 95.17 3 2 3 Whitelist UCEC-US 16 0.47 0.44 0 0 0.38 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 17 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 21 44863942 45821049 2 2 382 0 1 0 1 0 0.57 0.64 6 0 0 6 3 5 6 3 3 27.05 1.99 75.37 0 2 4 Whitelist UCEC-US 0.68 0.85 0 0 0.64 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 22 19010244 39040501 1 9 382 2 3 0 0 4 0.14 0 15 0 0 15 4 6 16 5 5 27.05 55.31 44.34 0 1 2 Whitelist UCEC-US 0.41 0.01 0 0 0.59 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::c88e3901-f3ee-436a-ba80-143c8eab7d69 X 44770339 44877500 1 1 382 1 0 0 0 0 0.39 0 2 NA NA NA NA NA 5 5 5 27.05 0.09 99.68 0 1 2 Whitelist UCEC-US 0.62 0 NA NA 0.59 1 No UCEC-US c88e3901-f3ee-436a-ba80-143c8eab7d69 UCEC 0.96 1.98 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577141_A_C,CN:2 2 UCEC-US DO41157 TCGA-AX-A2H5 c88e3901-f3ee-436a-ba80-143c8eab7d69 female alive C54.1 67 NA 2167 NA Included Uterus-AdenoCA UCEC US 0 71.28 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 1 NA NA 0 0 26 0 0 0 0 0 NA 0.45 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.7 0 NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 2 NA NA 0 0 26 0 0 0 0 0 NA 0.48 NA 0.05 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.72 0.05 NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 3 4920626 5184461 1 1 26 0 1 0 0 0 0.39 0.11 2 0 NA NA NA NA NA NA NA 3.38 0.13 99.73 0 2 3 Whitelist UCEC-US 0.62 0.28 0 NA 0.59 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 2 0.04 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 4 NA NA 0 0 26 0 0 0 0 0 NA 0.25 NA 0.02 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.49 0.02 NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 5 NA NA 0 0 26 0 0 0 0 0 NA 0 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.03 0 NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 6 NA NA 0 0 26 0 0 0 0 0 NA 0.2 NA 0 NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.43 0 NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 7 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 8 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 9 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 10 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 11 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 12 NA NA 0 0 26 0 0 0 0 0 NA 1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 1 NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 13 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 14 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 15 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 16 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 17 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.75 NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 18 NA NA 0 0 26 0 0 0 0 0 NA 0.51 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.75 NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 19 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 20 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 21 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d17668c4-5d66-4e16-8b70-b54616581aae UCEC 0.93 2.07 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO41446 TCGA-AP-A0LL d17668c4-5d66-4e16-8b70-b54616581aae female alive C54.1 56 NA 2141 NA Included Uterus-AdenoCA UCEC US 0 70.43 UCEC-US::d17668c4-5d66-4e16-8b70-b54616581aae 22 NA NA 0 0 26 0 0 0 0 0 NA NA NA NA NA 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female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 4 645319 187120015 4 9 291 2 2 0 0 5 0.26 0.72 38 0 0 38 5 6 38 5 6 71.37 84.19 15.59 1 3 5 Whitelist UCEC-US 0.85 0.9 0 0 0.59 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 13 0.02 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 5 67130119 67926766 2 2 291 0 2 0 0 0 0.11 0.02 4 0 0 4 0 3 20 5 9 71.37 31.32 68.52 0 2 3 Whitelist UCEC-US 0.54 0.08 0 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 6 111224385 112470043 2 2 291 0 2 0 0 0 0.11 0.9 3 0 0 NA NA NA 33 5 8 71.37 95.47 1.7 0 5 6 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 7 101790912 103748476 2 2 291 0 1 1 0 0 0.57 0.79 6 0 0 6 3 4 26 3 7 71.37 66 30.97 0 5 3 Whitelist UCEC-US 0.68 0.95 0 0 0.64 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 8 8903347 146011056 1 15 291 1 8 0 0 6 0 0.89 21 0 0 21 6 11 24 7 14 71.37 75.2 24.55 0 4 3 Whitelist UCEC-US 0.54 1 0 0 0.02 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 24 0.04 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 9 19544852 92267309 1 2 291 0 2 0 0 0 0.11 0.05 3 0.01 0 NA NA NA 9 3 3 71.37 6.77 92.53 0 2 3 Whitelist UCEC-US 0.54 0.16 0.01 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 10 11428087 120707761 1 13 291 2 9 0 0 2 0 1 19 0 0 19 3 4 20 3 4 71.37 96.12 0.44 0 3 4 Whitelist UCEC-US 4 0.02 1 0 0 0.02 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 24 0.04 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 11 34359418 122946403 1 11 291 2 9 0 0 0 0 0.58 28 0 0 28 4 7 29 4 7 71.37 57.58 38.75 0 2 3 Whitelist UCEC-US 0.02 0.8 0 0 0.02 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 22 0.04 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 12 540793 55716467 2 4 291 1 1 0 0 2 0.57 0.01 23 0 0 23 5 9 44 5 9 71.37 95.56 0.76 0 4 5 Whitelist UCEC-US 0.68 0.04 0 0 0.64 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 6 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 13 20643992 95943495 1 4 291 2 2 0 0 0 0.26 0.14 13 0 0 13 6 7 18 6 7 71.37 97.09 0.13 0 4 5 Whitelist UCEC-US 0.62 0.34 0 0 0.59 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 8 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 14 40150251 40423394 2 2 291 0 2 0 0 0 0.11 1 4 0 0 4 0 3 18 4 5 71.37 33.26 65.82 0 1 3 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 15 40041160 41823557 2 2 291 0 2 0 0 0 0.11 0.1 3 0 0 NA NA NA 18 6 8 71.37 38.01 61.86 0 2 3 Whitelist UCEC-US 0.54 0.27 0 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 4 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 16 10612557 84819106 2 7 291 0 4 0 0 3 0.01 0.02 16 0 0 16 5 9 21 5 9 71.37 12.18 87.72 0 2 3 Whitelist UCEC-US 0.62 0.07 0 0 0.16 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 11 0.02 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 17 26394193 47268036 2 6 291 0 0 1 1 4 0.57 0 10 0 0 10 4 7 20 5 8 71.37 80.48 19.52 2 3 6 Whitelist UCEC-US 0.62 0.01 0 0 0.64 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 8 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 18 NA NA 0 0 291 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 7 6 6 0 0 0 0 0 0 Whitelist UCEC-US NA 0.03 NA NA NA 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 19 819734 41591122 1 12 291 0 3 3 1 5 0.28 0 23 0 0 23 4 6 24 4 8 71.37 84.74 7.98 0 4 7 Whitelist UCEC-US 0.93 0 0 0 0.59 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 19 0.03 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 20 2698769 19030653 2 4 291 2 1 0 1 0 0.57 0 11 0 0 11 4 5 36 4 5 71.37 99.47 0.3 0 3 4 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 8 0.01 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 21 NA NA 0 0 291 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 0 0 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c 22 18009872 50779115 1 17 291 0 10 0 0 7 0 0 21 0 0 21 4 11 23 4 5 71.37 87.87 0 0 4 3 Whitelist UCEC-US 0.01 0 0 0 0 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 27 0.05 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d39df936-4bc6-404d-9e1d-f6416cc5a34c X 7397884 154895230 1 9 291 5 2 1 0 1 0.07 0.14 12 0 0 12 3 7 13 3 5 71.37 89.67 6.96 1 3 2 Whitelist UCEC-US 0.62 0.34 0 0 0.48 0 No UCEC-US d39df936-4bc6-404d-9e1d-f6416cc5a34c UCEC 0.77 3.29 Uterus-AdenoCA NA 17 0.03 NA 3 UCEC-US DO41217 TCGA-AJ-A23M d39df936-4bc6-404d-9e1d-f6416cc5a34c female alive C54.1 61 NA 36 NA Included Uterus-AdenoCA UCEC US 0 1.18 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 1 NA NA 0 0 4 0 0 0 0 0 NA 0.28 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.52 NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 2 152357219 152670495 1 1 4 0 1 0 0 0 0.39 0.3 2 NA NA NA NA NA 5 3 3 5.23 0.87 99.04 0 2 3 Whitelist UCEC-US 0.62 0.54 NA NA 0.59 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 2 0.25 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 3 NA NA 0 0 4 0 0 0 0 0 NA 0.25 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.49 NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 4 70092553 70391712 1 1 4 1 0 0 0 0 0.39 0.24 1 NA NA NA NA NA NA NA NA 5.23 0 99.98 0 2 NA Whitelist UCEC-US 0.62 0.48 NA NA 0.59 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 2 0.25 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 5 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 6 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 7 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 8 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 9 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 10 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 11 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 12 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 13 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 14 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 15 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 16 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 17 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 18 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 19 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 20 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 21 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 22 NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::d77e4dbc-b239-4742-8cb7-efd427010d13 X NA NA 0 0 4 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US d77e4dbc-b239-4742-8cb7-efd427010d13 UCEC 0.95 2.02 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV;frameshift_deletion,17_7577121_A_G;17_7578458_A_G;17_7579420_-_G,CN:2 2 UCEC-US DO42256 TCGA-AP-A054 d77e4dbc-b239-4742-8cb7-efd427010d13 female deceased C54.1 64 709 NA NA Included Uterus-AdenoCA UCEC US 1 23.32 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 1 10742235 224280908 1 15 251 0 8 2 0 5 0 0.35 24 0 0 24 9 17 26 9 17 90.92 99.82 0.18 0 4 5 Whitelist UCEC-US 17_6 0.12 0.6 0 0 0.04 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 25 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 2 105654649 177420324 2 2 251 0 0 1 1 0 0.57 0.3 6 0 0 6 6 6 25 11 20 90.92 99.9 0 1 4 5 Whitelist UCEC-US 0.68 0.55 0 0 0.64 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 3 13293139 51016713 2 8 251 0 6 1 1 0 0.01 0.54 13 0 0 13 4 6 23 4 10 90.92 99.99 0 1 4 5 Whitelist UCEC-US 0.28 0.77 0 0 0.21 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 4 9621301 106868032 1 4 251 1 2 0 0 1 0.3 0 5 0.09 0 5 5 5 5 5 5 90.92 99.89 0 0 4 6 Whitelist UCEC-US 0.62 0 0.09 0 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 7 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 5 37988 46176387 7 12 251 1 1 2 3 5 0.67 0.01 24 0 0 24 5 5 38 6 7 90.92 94.95 2.37 6 5 10 Whitelist UCEC-US 0.93 0.03 0 0 0.74 0 Low confidence UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA With other complex events 19 0.04 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 6 18147464 152272406 1 16 251 3 5 1 0 7 0.09 0.29 17 0 0 17 5 7 20 5 10 90.92 99.82 0 0 4 5 Whitelist UCEC-US 1 0.95 0.53 0 0 0.48 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 25 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 7 50422318 98563133 9 14 251 3 2 1 3 5 0.75 0 19 0 0 19 6 15 34 6 7 90.92 97.45 0 4 5 4 Whitelist UCEC-US X 0.98 0 0 0 0.83 0 Low confidence UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA With other complex events 23 0.05 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 8 8906277 145780299 9 19 251 3 2 2 2 10 0.95 0 40 0 0 40 3 5 46 3 5 90.92 83.35 13.06 0 9 5 Whitelist UCEC-US 5 0.72 0 0 0 0.97 0 Linked to low confidence UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA With other complex events 28 0.06 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 9 35618838 35787191 8 28 251 1 2 3 2 20 0.8 0 6 0 0 6 0 3 18 5 5 90.92 99.29 0 0 5 4 Whitelist UCEC-US 7 0.9 0 0 0 0.84 0 Linked to low confidence UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA With other complex events 36 0.07 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 10 113778764 114310995 1 2 251 0 1 0 0 1 0.39 0.05 3 0 NA NA NA NA 4 0 0 90.92 99.82 0 0 4 6 Whitelist UCEC-US 6 0.68 0.16 0 NA 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 3 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 11 65122311 65572141 2 2 251 0 1 0 1 0 0.57 0.55 3 0 0 NA NA NA 15 4 7 90.92 99.54 0 0 3 5 Whitelist UCEC-US 0.68 0.77 0 0 0.64 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 12 1201305 110822423 1 7 251 2 5 0 0 0 0.02 0.18 10 0 0 10 8 10 11 9 9 90.92 99.92 0 0 4 5 Whitelist UCEC-US 0.41 0.4 0 0 0.33 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 13 24560568 24595798 1 1 251 0 1 0 0 0 0.39 0 2 NA NA NA NA NA NA NA NA 90.92 100 0 0 4 5 Whitelist UCEC-US 0.62 0.02 NA NA 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 14 35332289 97275764 1 3 251 0 2 0 0 1 0.11 0.1 4 NA 0 4 3 4 8 5 8 90.92 96.29 0 0 4 5 Whitelist UCEC-US 0.41 0.26 NA 0 0.48 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 15 46941974 47801457 2 2 251 1 1 0 0 0 0.57 0.24 1 0 0 NA NA NA 11 4 6 90.92 99.79 0.11 0 3 NA Whitelist UCEC-US 0.68 0.48 0 0 0.64 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 16 56692937 70632343 1 3 251 0 2 1 0 0 0.3 0.69 8 0 0 8 8 8 13 9 10 90.92 39.67 55.33 0 2 3 Whitelist UCEC-US 0.62 0.89 0 0 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 17 28025588 77089742 1 11 251 2 3 1 0 5 0.34 0.03 15 0 0 15 5 6 18 5 6 90.92 22.33 77.65 0 2 3 Whitelist UCEC-US 1_6 0.68 0.11 0 0 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 17 0.03 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 18 43807810 52870982 1 2 251 0 1 1 0 0 0.57 0.69 4 0 0 4 3 4 7 5 7 90.92 99.96 0 0 3 4 Whitelist UCEC-US 0.68 0.89 0 0 0.64 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 19 9695043 12783933 3 5 251 0 1 1 1 2 0.8 0 4 0 0 4 3 4 19 5 5 90.92 84.64 14.92 0 8 5 Whitelist UCEC-US 0.68 0 0 0 0.84 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 20 52433981 52642290 2 2 251 0 0 1 1 0 0.57 0.66 3 0 0 NA NA NA 11 11 11 90.92 98.99 0 0 4 5 Whitelist UCEC-US 0.68 0.87 0 0 0.64 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 21 33691946 34157432 1 1 251 0 1 0 0 0 0.39 0.38 2 NA NA NA NA NA NA NA NA 90.92 77.35 0 0 4 6 Whitelist UCEC-US 0.62 0.63 NA NA 0.59 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 22 30423763 50896368 1 3 251 0 3 0 0 0 0.03 0.77 5 0 0 5 5 5 6 6 6 90.92 99.2 0 0 5 4 Whitelist UCEC-US 0.41 0.93 0 0 0.33 0 No UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 X 6054494 128046950 1 8 251 0 3 0 1 4 0.11 0.25 13 0.04 0 13 11 13 14 11 11 90.92 99.77 0 0 4 5 Whitelist UCEC-US 7 0.54 0.49 0.04 0 0.48 0 Linked to low confidence UCEC-US de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 UCEC 0.82 4.1 Uterus-AdenoCA After polyploidization 12 0.02 nonsynonymous_SNV,17_7577559_C_G,CN:2 4 UCEC-US DO41343 TCGA-EO-A1Y8 de4e13c8-5ad0-46d2-ae54-b9ca22b939d8 female alive C54.1 87 NA 328 NA Included Uterus-AdenoCA UCEC US 0 10.79 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 1 150420355 151506640 8 10 305 3 3 1 1 2 0.57 0 12 0 0 12 5 5 58 5 6 73.94 96.56 0.12 0 4 1 Whitelist UCEC-US 0.68 0 0 0 0.64 0 Low confidence UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA With other complex events 18 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 2 9048222 220281565 1 17 305 4 6 2 0 5 0.08 0.68 30 0 0 30 5 7 31 5 7 73.94 90.14 9.77 0 4 3 Whitelist UCEC-US 1 0.77 0.88 0 0 0.48 0 Linked to low confidence UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA With other complex events 29 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 3 135916245 136438605 2 2 305 1 0 0 1 0 0.57 0 4 0 0 4 0 3 53 11 12 73.94 77.68 18.93 0 3 6 Whitelist UCEC-US 0.68 0.02 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 4 13009212 175504881 1 4 305 2 1 1 0 0 0.57 0 11 0 0 11 3 5 12 3 5 73.94 97.45 0 0 3 5 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 5 9881562 148446450 1 17 305 2 8 0 1 6 0 1 36 0 0 36 7 11 38 7 11 73.94 28.34 68.89 2 2 6 Whitelist UCEC-US 1 0.21 1 0 0 0.09 0 Linked to low confidence UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA With other complex events 28 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 6 131700902 134556237 3 3 305 0 1 1 1 0 0.8 0.28 4 0 0 4 3 4 28 6 13 73.94 99.85 0 0 6 4 Whitelist UCEC-US 0.87 0.52 0 0 0.84 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 7 34541989 100249409 1 7 305 4 3 0 0 0 0.06 0.9 10 0 0 10 3 6 18 4 7 73.94 73.17 26.61 3 4 5 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 8 88543881 134393690 2 2 305 0 0 1 1 0 0.57 0.6 16 0 0 16 5 6 24 5 6 73.94 67.13 29.44 0 6 3 Whitelist UCEC-US 0.68 0.82 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 9 19185463 132063063 1 5 305 0 4 0 0 1 0.01 0.1 14 0 0 14 4 6 16 4 6 73.94 38.14 59.3 0 2 3 Whitelist UCEC-US 0.1 0.27 0 0 0.16 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 9 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 10 111845595 112566867 14 14 305 3 3 4 4 0 0.96 0 13 0 0 13 3 3 50 8 8 73.94 90.07 6.49 0 4 1 Whitelist UCEC-US 0.98 0 0 0 0.98 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 28 0.05 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 11 102365297 102484386 2 2 305 0 1 1 0 0 0.57 0.68 3 0 0 NA NA NA 16 5 7 73.94 96.48 0.06 0 4 5 Whitelist UCEC-US 0.68 0.88 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 12 23182991 113143943 1 10 305 1 3 0 0 6 0.11 0.89 13 0 0 13 3 5 14 3 5 73.94 99.89 0.03 0 3 4 Whitelist UCEC-US 0.62 1 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 14 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 13 60692032 61081585 1 1 305 0 1 0 0 0 0.39 0.01 2 NA NA NA NA NA 6 3 3 73.94 19.12 80.88 0 2 3 Whitelist UCEC-US 0.62 0.05 NA NA 0.59 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 14 33540821 34996325 2 2 305 1 1 0 0 0 0.57 0.51 4 0 0 4 0 4 14 3 4 73.94 45.23 51.06 0 2 3 Whitelist UCEC-US 0.68 0.75 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 15 99216082 99515724 2 2 305 2 0 0 0 0 0.11 0.49 4 0 0 4 3 4 13 3 7 73.94 91.71 8.18 0 3 2 Whitelist UCEC-US 0.54 0.73 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 16 11456987 74967082 1 4 305 1 3 0 0 0 0.11 0.21 10 0 0 10 5 8 13 5 11 73.94 52.94 46.97 0 2 3 Whitelist UCEC-US 0.54 0.44 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 8 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 17 4885650 58141705 1 6 305 3 1 0 1 1 0.28 0.11 12 0 0 12 6 10 15 6 11 73.94 64.81 30.76 0 2 3 Whitelist UCEC-US 0.68 0.28 0 0 0.59 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 18 3614772 3871981 2 2 305 0 2 0 0 0 0.11 0.86 3 0 0 NA NA NA 16 3 4 73.94 61.54 33.81 0 6 7 Whitelist UCEC-US 0.54 0.99 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 19 16766395 23906473 2 2 305 0 1 0 1 0 0.57 0 5 0 0 5 0 4 25 4 6 73.94 67.84 24.88 0 2 3 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 20 45819349 46128491 3 3 305 0 3 0 0 0 0.03 0.03 6 0 0 6 3 5 25 4 12 73.94 92.12 0.05 0 5 6 Whitelist UCEC-US 0.41 0.1 0 0 0.33 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 21 38760307 38836588 2 2 305 2 0 0 0 0 0.11 1 2 0 0 NA NA NA 5 3 3 73.94 77.35 0 0 1 3 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 22 23616561 42631823 1 4 305 1 1 0 0 2 0.57 0.1 4 0 0 4 3 4 6 3 5 73.94 88.07 11.93 0 4 5 Whitelist UCEC-US 0.62 0.27 0 0 0.64 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e1e8dc66-467c-48a5-be56-3db4f665b9f1 X 5965760 149634680 1 9 305 3 6 0 0 0 0.01 0.19 15 0 0 15 5 15 16 5 5 73.94 96.07 0.06 4 4 5 Whitelist UCEC-US 0.28 0.41 0 0 0.21 0 No UCEC-US e1e8dc66-467c-48a5-be56-3db4f665b9f1 UCEC 0.44 3.44 Uterus-AdenoCA NA 18 0.03 nonsynonymous_SNV,17_7577120_T_C,CN:2 3 UCEC-US DO43658 TCGA-AP-A0LI e1e8dc66-467c-48a5-be56-3db4f665b9f1 female alive C54.1 67 NA 2602 NA Included Uterus-AdenoCA UCEC US 0 85.59 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 1 29834388 33723676 2 2 232 0 0 1 1 0 0.57 0.71 1 0 0 NA NA NA 16 5 9 34.92 0.66 99.19 0 2 NA Whitelist UCEC-US 0.68 0.9 0 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 2 28109686 225439717 1 14 232 6 6 0 0 2 0.01 0.64 13 0 0 13 5 5 13 5 5 34.92 5.78 94.11 2 2 0 Whitelist UCEC-US 0.13 0.85 0 0 0.16 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 26 0.06 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 3 13501633 53207642 3 6 232 1 3 1 1 0 0.57 0 21 0 0 21 5 9 41 7 13 34.92 5 94.96 0 2 3 Whitelist UCEC-US 0.68 0 0 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 12 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 4 77358068 77735509 2 7 232 1 0 0 1 5 0.57 0.51 2 0 0 NA NA NA 17 4 4 34.92 81.44 15.98 0 1 2 Whitelist UCEC-US 0.77 0.75 0 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 9 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 5 32134638 179250211 1 9 232 3 6 0 0 0 0.01 0.42 8 0 0 8 5 8 8 5 8 34.92 96.53 0.62 0 1 2 Whitelist UCEC-US 0.28 0.66 0 0 0.21 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 18 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 6 18393793 18519039 3 3 232 2 1 0 0 0 0.3 0.02 4 0 0 4 0 3 26 7 13 34.92 3.48 93.59 0 2 3 Whitelist UCEC-US 0.62 0.07 0 0 0.59 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 7 70229301 142687636 1 3 232 1 1 0 0 1 0.57 0 2 NA 0 NA NA NA NA NA NA 34.92 37.88 62.1 0 1 2 Whitelist UCEC-US 0.62 0.02 NA 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 8 36830367 37268337 2 2 232 0 1 0 1 0 0.57 0.65 4 0 0 4 0 3 15 9 9 34.92 95.76 0.72 0 1 4 Whitelist UCEC-US 0.68 0.86 0 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 9 130075780 130683733 8 8 232 1 5 1 1 0 0.11 0 3 0 0 NA NA NA 12 6 7 34.92 65.09 32.36 0 1 2 Whitelist UCEC-US 0.54 0 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 10 24622099 105126808 1 9 232 4 3 0 0 2 0.06 0.64 11 0 0 11 3 5 11 3 5 34.92 4.77 95.16 0 2 1 Whitelist UCEC-US 19 0.54 0.85 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 11 102281907 102569846 2 2 232 0 2 0 0 0 0.11 0.28 4 0 0 4 0 3 8 3 5 34.92 0.84 99.01 0 2 3 Whitelist UCEC-US 0.54 0.52 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 12 5220084 125477088 1 8 232 2 6 0 0 0 0.01 0.75 5 0 0 5 3 5 5 3 5 34.92 0.64 99.28 0 2 3 Whitelist UCEC-US 0.21 0.92 0 0 0.16 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 13 44966698 106823874 1 3 232 1 2 0 0 0 0.3 0.86 5 0 0 5 4 5 8 4 6 34.92 47.55 52.45 0 1 2 Whitelist UCEC-US 0.62 0.99 0 0 0.59 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 14 25499482 33175715 4 4 232 1 3 0 0 0 0.11 0.18 2 0 0 NA NA NA 11 4 6 34.92 96.2 3 0 1 2 Whitelist UCEC-US 0.54 0.4 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 15 77197122 77220525 1 1 232 0 1 0 0 0 0.39 0.69 1 0 NA NA NA NA 5 5 5 34.92 100 0 0 1 NA Whitelist UCEC-US 0.62 0.89 0 NA 0.59 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 16 4774005 69453819 1 3 232 0 2 0 0 1 0.11 0.84 6 0 0 6 6 6 7 7 7 34.92 93.52 1.21 0 1 2 Whitelist UCEC-US 0.41 0.98 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 17 17724412 79204358 1 11 232 1 3 0 0 7 0.11 0.01 10 0 0 10 4 7 10 4 7 34.92 45.88 49.6 1 2 1 Whitelist UCEC-US 0.62 0.03 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 18 76993576 77980074 2 2 232 0 0 1 1 0 0.57 0.54 2 0 0 NA NA NA 7 3 3 34.92 1.21 98.6 0 2 3 Whitelist UCEC-US 0.68 0.77 0 0 0.64 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 19 1131621 52210858 1 12 232 3 4 0 0 5 0.06 0 16 0 0 16 5 5 17 5 5 34.92 12.87 86.95 10 2 1 Whitelist UCEC-US 0.54 0.01 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 20 32089003 45662007 1 4 232 1 3 0 0 0 0.11 0.65 4 0 0 4 4 4 5 5 5 34.92 1.54 98.34 0 2 3 Whitelist UCEC-US 0.54 0.86 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 8 0.02 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 21 21742692 21753849 1 1 232 0 1 0 0 0 0.39 0.07 1 0 NA NA NA NA 5 3 3 34.92 0.53 76.83 0 2 NA Whitelist UCEC-US 0.62 0.2 0 NA 0.59 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b 22 29011535 29615451 2 2 232 0 2 0 0 0 0.11 0.06 2 0 0 NA NA NA 8 3 5 34.92 77.22 11.67 0 3 4 Whitelist UCEC-US 0.54 0.19 0 0 0.48 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::e56491af-718f-4ca1-b3cd-0e5b3154697b X 140022222 149268109 3 3 232 1 0 1 1 0 0.8 0.05 3 0 0 NA NA NA 6 6 6 34.92 0.67 99.11 0 2 1 Whitelist UCEC-US 0.87 0.16 0 0 0.84 0 No UCEC-US e56491af-718f-4ca1-b3cd-0e5b3154697b UCEC 0.85 1.8 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7578406_T_C,CN:1 2 UCEC-US DO43811 TCGA-D1-A1NU e56491af-718f-4ca1-b3cd-0e5b3154697b female alive C54.1 74 NA 312 NA Included Uterus-AdenoCA UCEC US 0 10.26 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 1 31080164 31635805 5 8 241 0 1 2 2 3 0.53 0 13 0 0 13 3 4 47 5 9 82.85 88.75 11.25 0 14 8 Whitelist UCEC-US 3 0.62 0 0 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 13 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 2 113788877 137588770 3 8 241 0 1 1 1 5 0.8 0.29 17 0 0 17 3 5 31 6 6 82.85 99.75 0.15 0 8 4 Whitelist UCEC-US 0.87 0.54 0 0 0.84 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 11 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 3 8345339 66971463 1 8 241 0 4 0 0 4 0.01 0.53 15 0 0 15 9 10 21 10 11 82.85 54.3 42.56 0 2 4 Whitelist UCEC-US 0.62 0.76 0 0 0.16 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 12 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 4 6504018 7923311 2 2 241 0 1 0 1 0 0.57 0.01 3 0.09 0 NA NA NA 12 5 5 82.85 73.26 24.37 0 2 3 Whitelist UCEC-US 0.68 0.06 0.09 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 5 76995908 173748630 4 8 241 2 3 2 1 0 0.8 0.04 22 0 0 22 6 7 34 6 10 82.85 91.71 8.12 0 4 6 Whitelist UCEC-US 0.87 0.15 0 0 0.84 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 6 17000437 17632743 3 3 241 1 1 0 1 0 0.8 0.89 5 0 0 5 3 3 25 4 7 82.85 99.86 0 0 3 4 Whitelist UCEC-US 0.87 1 0 0 0.84 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 7 5345454 151554319 1 11 241 2 3 2 1 3 0.8 1 20 0 0 20 3 7 21 3 7 82.85 99.78 0 0 3 5 Whitelist UCEC-US 0.87 1 0 0 0.84 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 19 0.04 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 8 75218723 144786611 2 2 241 0 0 1 1 0 0.57 0.24 6 0 0 6 6 6 11 7 9 82.85 99.99 0 0 3 5 Whitelist UCEC-US 0.68 0.48 0 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 9 132031526 132458820 2 3 241 1 1 0 0 1 0.57 0.74 3 0 0 NA NA NA 20 5 10 82.85 55.86 41.6 0 1 2 Whitelist UCEC-US 0.87 0.91 0 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 10 29693725 115905936 1 7 241 0 7 0 0 0 0 0.28 14 0 0 14 5 14 15 5 15 82.85 99.82 0 0 4 6 Whitelist UCEC-US 0.02 0.52 0 0 0.01 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 14 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 11 68568077 69246356 3 3 241 0 0 2 1 0 0.3 0.54 4 0 0 4 0 3 17 5 5 82.85 77.73 21.84 0 1 4 Whitelist UCEC-US 0.62 0.77 0 0 0.59 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 12 NA NA 0 0 241 0 0 0 0 0 NA 0.01 NA NA NA NA NA NA 5 3 5 0 0 0 0 0 0 Whitelist UCEC-US NA 0.03 NA NA NA 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 13 40381048 56235106 1 3 241 2 1 0 0 0 0.3 0.07 6 0 0 6 3 4 7 3 5 82.85 99.88 0.12 0 4 2 Whitelist UCEC-US 0.62 0.21 0 0 0.59 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 6 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 14 68907735 69273012 2 3 241 0 2 0 0 1 0.11 0.03 7 0 0 7 3 4 24 4 4 82.85 87.09 9.13 0 8 4 Whitelist UCEC-US 0.62 0.1 0 0 0.48 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 15 43492695 90759404 1 9 241 0 6 0 1 2 0 0.33 15 0 0 15 5 6 16 5 7 82.85 100 0 0 4 6 Whitelist UCEC-US 0.48 0.58 0 0 0.09 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 16 50841471 84864959 2 3 241 0 0 1 1 1 0.57 0.07 6 0 0 6 3 4 16 3 6 82.85 60.67 39.24 0 8 2 Whitelist UCEC-US 0.87 0.21 0 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 5 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 17 72770435 74664149 5 10 241 0 1 3 1 5 0.28 0 7 0 0 7 3 3 34 7 8 82.85 44.11 51.44 0 4 6 Whitelist UCEC-US 18 0.68 0 0 0 0.59 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 15 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 18 8551041 66867644 1 9 241 0 5 1 1 2 0.04 0.31 14 0 0 14 7 7 15 7 8 82.85 99.96 0 0 4 5 Whitelist UCEC-US 0.48 0.56 0 0 0.38 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 19 29864367 38458007 5 11 241 0 0 1 4 6 0.04 0 19 0 0 19 4 7 31 4 8 82.85 56.22 36.51 0 8 6 Whitelist UCEC-US 0.62 0 0 0 0.36 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 16 0.03 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 20 31775458 60914043 2 6 241 0 4 0 0 2 0.01 0.04 11 0 0 11 3 5 14 3 5 82.85 99.7 0 0 4 6 Whitelist UCEC-US 0.54 0.15 0 0 0.16 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 10 0.02 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 21 NA NA 0 0 241 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 22 20892143 29798662 1 2 241 0 1 1 0 0 0.57 1 5 NA 0 5 3 3 6 3 3 82.85 48.69 51.31 0 2 3 Whitelist UCEC-US 0.68 1 NA 0 0.64 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 4 0.01 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f7e06a10-74ca-4f52-a944-b3f22c016998 X 46578838 47657208 1 1 241 0 1 0 0 0 0.39 0.08 2 0 NA NA NA NA 9 3 3 82.85 99.72 0.05 0 4 5 Whitelist UCEC-US 0.62 0.22 0 NA 0.59 0 No UCEC-US f7e06a10-74ca-4f52-a944-b3f22c016998 UCEC 0.7 3.55 Uterus-AdenoCA NA 2 0 nonsynonymous_SNV,17_7577539_A_G,CN:2 4 UCEC-US DO41951 TCGA-AP-A05D f7e06a10-74ca-4f52-a944-b3f22c016998 female alive C54.1 67 NA 1364 NA Included Uterus-AdenoCA UCEC US 0 44.87 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 1 8101092 53098125 1 4 82 1 3 0 0 0 0.11 1 6 0 0 6 6 6 7 7 7 31.84 0.49 99.51 0 2 3 Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 8 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 2 35217124 62929258 1 2 82 2 0 0 0 0 0.11 0.16 2 NA 0 NA NA NA 4 4 4 31.84 67.32 32.58 0 1 2 Whitelist UCEC-US 0.54 0.37 NA 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 3 13428572 155674645 1 2 82 2 0 0 0 0 0.11 0.13 1 NA 0.04 NA NA NA NA NA NA 31.84 0 99.95 0 2 NA Whitelist UCEC-US 0.54 0.32 NA 0.04 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 4 758303 187911495 1 7 82 3 0 1 0 3 0.11 0.07 5 0 0 5 3 5 5 3 3 31.84 5.8 94.2 0 2 1 Whitelist UCEC-US 0.62 0.21 0 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 11 0.07 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 5 26581151 175140931 1 3 82 3 0 0 0 0 0.03 0.82 3 0 0 NA NA NA 4 4 4 31.84 56.99 40.34 0 2 1 Whitelist UCEC-US 0.41 0.96 0 0 0.33 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 6 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 6 16319982 103708249 1 2 82 2 0 0 0 0 0.11 0.24 2 NA 0 NA NA NA NA NA NA 31.84 0.03 99.72 0 1 2 Whitelist UCEC-US 0.54 0.48 NA 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 7 68203692 128400168 1 4 82 3 1 0 0 0 0.11 1 1 0 0 NA NA NA NA NA NA 31.84 0 99.78 0 2 NA Whitelist UCEC-US 0.54 1 0 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 8 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 8 109586550 114883503 1 3 82 3 0 0 0 0 0.03 0.8 2 0 0 NA NA NA NA NA NA 31.84 0.09 99.91 0 1 2 Whitelist UCEC-US 0.41 0.95 0 0 0.33 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 6 0.04 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 9 8155722 33866664 1 5 82 2 2 0 0 1 0.26 0.04 3 0 0 NA NA NA 7 6 6 31.84 78.7 20.59 1 3 2 Whitelist UCEC-US 0.62 0.14 0 0 0.59 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 9 0.05 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 10 NA NA 0 0 82 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.41 NA NA NA 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 11 684618 28477072 5 10 82 2 1 1 1 5 0.9 0 3 0 0 NA NA NA 5 5 5 31.84 45.3 54.28 0 2 1 Whitelist UCEC-US 0.68 0 0 0 0.92 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 15 0.09 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 12 NA NA 0 0 82 0 0 0 0 0 NA 0.19 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.41 NA NA NA 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 13 70017637 70138959 1 1 82 1 0 0 0 0 0.39 0.53 1 NA NA NA NA NA NA NA NA 31.84 100 0 0 1 NA Whitelist UCEC-US 0.62 0.76 NA NA 0.59 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 14 33177735 92906065 1 10 82 1 1 0 1 7 0.8 0 3 0 0 NA NA NA NA NA NA 31.84 0.25 98.83 0 2 3 Whitelist UCEC-US 0.68 0 0 0 0.84 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 13 0.08 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 15 64496137 94685759 1 3 82 2 0 0 0 1 0.11 0.29 4 0 0 4 4 4 5 4 4 31.84 74.71 25.19 0 2 3 Whitelist UCEC-US 0.62 0.54 0 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 5 0.03 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 16 71457198 80130934 10 11 82 2 2 4 2 1 0.75 0 1 0 0 NA NA NA 5 5 5 31.84 0.54 99.42 0 2 NA Whitelist UCEC-US 0.87 0 0 0 0.83 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 21 0.13 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 17 19714942 20160187 1 1 82 1 0 0 0 0 0.39 0.73 1 NA NA NA NA NA NA NA NA 31.84 100 0 0 1 NA Whitelist UCEC-US 0.62 0.9 NA NA 0.59 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 18 NA NA 0 0 82 0 0 0 0 0 NA 0.73 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.9 NA NA NA 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 19 6537250 7977809 1 1 82 1 0 0 0 0 0.39 1 2 NA NA NA NA NA NA NA NA 31.84 2.44 97.39 0 1 2 Whitelist UCEC-US 0.62 1 NA NA 0.59 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 20 15441065 32272223 1 2 82 2 0 0 0 0 0.11 0.7 2 NA 0 NA NA NA NA NA NA 31.84 0.05 98.98 0 1 2 Whitelist UCEC-US 0.54 0.89 NA 0 0.48 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 4 0.02 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 21 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae 22 NA NA 0 0 82 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 0 0 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae X 73417558 74003384 1 1 82 1 0 0 0 0 0.39 0.13 1 NA NA NA NA NA NA NA NA 31.84 99.77 0 0 1 NA Whitelist UCEC-US 0.62 0.32 NA NA 0.59 0 No UCEC-US f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae UCEC 0.95 1.72 Uterus-AdenoCA NA 2 0.01 nonsynonymous_SNV;nonsynonymous_SNV,17_7578508_T_C;17_7578527_G_A,CN:1 2 UCEC-US DO42536 TCGA-EY-A1GW f8ac5fd2-11f2-4b3a-a3a6-ff1a6d8e1cae female alive C54.1 73 NA 260 NA Included Uterus-AdenoCA UCEC US 0 8.55 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 1 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 2 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 3 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 4 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 5 NA NA 0 0 2 0 0 0 0 0 NA 0.12 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.31 NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 6 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 7 NA NA 0 0 2 0 0 0 0 0 NA 0.1 NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA 0.27 NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 8 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 9 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 10 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 11 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 12 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 13 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 14 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 15 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 16 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 17 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 18 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 19 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 20 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 21 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 UCEC-US DO42544 TCGA-AX-A1CI fba80122-d8b2-4d8d-a032-9767e8160f9f female alive C54.1 61 NA 2207 NA Included Uterus-AdenoCA UCEC US 0 72.6 UCEC-US::fba80122-d8b2-4d8d-a032-9767e8160f9f 22 NA NA 0 0 2 0 0 0 0 0 NA NA NA NA NA NA NA NA NA NA NA 0 0 0 0 0 0 Whitelist UCEC-US NA NA NA NA NA 0 No UCEC-US fba80122-d8b2-4d8d-a032-9767e8160f9f UCEC 0.91 2.02 Uterus-AdenoCA NA 0 0 NA 2 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